Citrus Sinensis ID: 043346

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-----
Protein Sequence
MQEMMKSMSLWVHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW
Secondary Structure (PSIPRED)
cccccccccccccccEEEEEEccccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEccccEEEEEccccccccccccccccccccEEEEccccHHHccccccccHHHHHHccEEEEc
Secondary Structure Prediction (SSPRO)
ccccEccccccccccEEEEEEHcHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccccccccccccEEEccccccHHHHHHHHHHHHcccccccccHHHHHHHcccHHHHccccccccEEEEEEEEEEEcc
Coil and Loop (DISEMBL)
MQEMMKSMSLWVHKRENLVFEYVNINLHKFIqqyhpmdsHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAAdsgmakeidapfdahtTEMVILRYrapkilfgrtncFAAIDMWAVLYLLRW
Flexible Loop (DISEMBL)
MQEMMKSMSLWVHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAAdsgmakeidapfdaHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW
Low Complexity Region (SEG)
MQEMMKSMSLWVHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW
Disordered region (IsUnstruct)
********SLWVHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR*
Disordered Region (DISOPRED)
MQEMMKSMSLWVHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW
Disordered Region (DISEMBL)
********SLWVHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW
Disordered Region (DISPRO)
MQEMMKSMSLWVHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MQEMMKSMSLWVHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	135	2.2.26 [Sep-21-2011]
Q8L4P8	303	Cyclin-dependent kinase B	yes	no	0.822	0.366	0.389	3e-21
Q2V419	311	Cyclin-dependent kinase B	yes	no	0.822	0.356	0.381	4e-21
P48734	297	Cyclin-dependent kinase 1	yes	no	0.814	0.370	0.4	8e-21
Q5RCH1	297	Cyclin-dependent kinase 1	yes	no	0.814	0.370	0.4	8e-21
P06493	297	Cyclin-dependent kinase 1	yes	no	0.814	0.370	0.4	9e-21
P39951	297	Cyclin-dependent kinase 1	yes	no	0.814	0.370	0.4	9e-21
Q05006	294	Cell division control pro	N/A	no	0.859	0.394	0.436	3e-20
P11440	297	Cyclin-dependent kinase 1	yes	no	0.814	0.370	0.391	4e-20
Q38774	305	Cell division control pro	N/A	no	0.822	0.363	0.398	5e-20
P25859	309	Cyclin-dependent kinase B	no	no	0.822	0.359	0.381	7e-20

>sp|Q8L4P8|CKB11_ORYSJ Cyclin-dependent kinase B1-1 OS=Oryza sativa subsp. japonica GN=CDKB1-1 PE=2 SV=1

 Score =  100 bits (248), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 46/118 (38%), Positives = 73/118 (61%), Gaps = 7/118 (5%)

Query: 18  LVFEYVNINLHKFIQQYH------PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNL 71
           LVFE+++ +L KF+  Y       P+ +++IK FLY +  G+++CH   ++HRDL   NL
Sbjct: 83  LVFEFLDTDLKKFVDAYRKGPNPRPLPTNVIKSFLYQLCKGVAHCHGHGVLHRDLKPQNL 142

Query: 72  LADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           L D E   +KI AD G+ +    P  ++T E+V L YRAP++L G T+    +D+W+V
Sbjct: 143 LVDKEKGILKI-ADLGLGRAFTVPMKSYTHEIVTLWYRAPEVLLGSTHYSTGVDIWSV 199

Oryza sativa subsp. japonica (taxid: 39947)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 2EC: 3

>sp|Q2V419|CKB12_ARATH Cyclin-dependent kinase B1-2 OS=Arabidopsis thaliana GN=CDKB1-2 PE=1 SV=2

 Score =  100 bits (248), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 45/118 (38%), Positives = 77/118 (65%), Gaps = 7/118 (5%)

Query: 18  LVFEYVNINLHKFIQQYH------PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNL 71
           LVFEY++ +L KFI  +       P+++ L+++F++ +  G+++CH+  ++HRDL   NL
Sbjct: 91  LVFEYLDTDLKKFIDSHRKGSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNL 150

Query: 72  LADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           L D +   +KI AD G+++    P  A+T E+V L YRAP++L G T+   A+D+W+V
Sbjct: 151 LLDKDKGILKI-ADLGLSRAFTVPLKAYTHEIVTLWYRAPEVLLGSTHYSTAVDIWSV 207

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

>sp|P48734|CDK1_BOVIN Cyclin-dependent kinase 1 OS=Bos taurus GN=CDK1 PE=2 SV=2

 Score = 99.0 bits (245), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 46/115 (40%), Positives = 75/115 (65%), Gaps = 5/115 (4%)

Query: 18  LVFEYVNINLHKFIQQYHP---MDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
           L+FE+++++L K++    P   MDS L+K +LY IL GI +CH+R+++HRDL   NLL D
Sbjct: 78  LIFEFLSMDLKKYLDSIPPGQFMDSSLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLID 137

Query: 75  IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            +  T+K+ AD G+A+    P   +T E+V L YR+P++L G       +D+W++
Sbjct: 138 -DKGTIKL-ADFGLARAFGIPIRVYTHEVVTLWYRSPEVLLGSARYSTPVDIWSI 190

Plays a key role in the control of the eukaryotic cell cycle by modulating the centrosome cycle as well as mitotic onset; promotes G2-M transition, and regulates G1 progress and G1-S transition via association with multiple interphase cyclins. Required in higher cells for entry into S-phase and mitosis. Phosphorylates PARVA/actopaxin, APC, AMPH, APC, BARD1, Bcl-xL/BCL2L1, BRCA2, CALD1, CASP8, CDC7, CDC20, CDC25A, CDC25C, CC2D1A, CSNK2 proteins/CKII, FZR1/CDH1, CDK7, CEBPB, CHAMP1, DMD/dystrophin, EEF1 proteins/EF-1, EZH2, KIF11/EG5, EGFR, FANCG, FOS, GFAP, GOLGA2/GM130, GRASP1, UBE2A/hHR6A, HIST1H1 proteins/histone H1, HMGA1, HIVEP3/KRC, LMNA, LMNB, LMNC, LBR, LATS1, MAP1B, MAP4, MARCKS, MCM2, MCM4, MKLP1, MYB, NEFH, NFIC, NPC/nuclear pore complex, PITPNM1/NIR2, NPM1, NCL, NUCKS1, NPM1/numatrin, ORC1, PRKAR2A, EEF1E1/p18, EIF3F/p47, p53/TP53, NONO/p54NRB, PAPOLA, PLEC/plectin, RB1, UL40/R2, RAB4A, RAP1GAP, RCC1, RPS6KB1/S6K1, KHDRBS1/SAM68, ESPL1, SKI, BIRC5/survivin, STIP1, TEX14, beta-tubulins, MAPT/TAU, NEDD1, VIM/vimentin, TK1, FOXO1, RUNX1/AML1 and RUNX2. CDK1/CDC2-cyclin-B controls pronuclear union in interphase fertilized eggs. Essential for early stages of embryonic development. During G2 and early mitosis, CDC25A/B/C-mediated dephosphorylation activates CDK1/cyclin complexes which phosphorylate several substrates that trigger at least centrosome separation, Golgi dynamics, nuclear envelope breakdown and chromosome condensation. Once chromosomes are condensed and aligned at the metaphase plate, CDK1 activity is switched off by WEE1- and PKMYT1-mediated phosphorylation to allow sister chromatid separation, chromosome decondensation, reformation of the nuclear envelope and cytokinesis. Inactivated by PKR/EIF2AK2- and WEE1-mediated phosphorylation upon DNA damage to stop cell cycle and genome replication at the G2 checkpoint thus facilitating DNA repair. Reactivated after successful DNA repair through WIP1-dependent signaling leading to CDC25A/B/C-mediated dephosphorylation and restoring cell cycle progression. In proliferating cells, CDK1-mediated FOXO1 phosphorylation at the G2-M phase represses FOXO1 interaction with 14-3-3 proteins and thereby promotes FOXO1 nuclear accumulation and transcription factor activity, leading to cell death of postmitotic neurons. The phosphorylation of beta-tubulins regulates microtubule dynamics during mitosis. NEDD1 phosphorylation promotes PLK1-mediated NEDD1 phosphorylation and subsequent targeting of the gamma-tubulin ring complex (gTuRC) to the centrosome, an important step for spindle formation. In addition, CC2D1A phosphorylation regulates CC2D1A spindle pole localization and association with SCC1/RAD21 and centriole cohesion during mitosis. The phosphorylation of Bcl-xL/BCL2L1 after prolongated G2 arrest upon DNA damage triggers apoptosis. In contrast, CASP8 phosphorylation during mitosis prevents its activation by proteolysis and subsequent apoptosis. This phosphorylation occurs in cancer cell lines, as well as in primary breast tissues and lymphocytes. EZH2 phosphorylation promotes H3K27me3 maintenance and epigenetic gene silencing. CALD1 phosphorylation promotes Schwann cell migration during peripheral nerve regeneration.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

>sp|Q5RCH1|CDK1_PONAB Cyclin-dependent kinase 1 OS=Pongo abelii GN=CDK1 PE=2 SV=1

 Score = 99.0 bits (245), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 46/115 (40%), Positives = 75/115 (65%), Gaps = 5/115 (4%)

Query: 18  LVFEYVNINLHKFIQQYHP---MDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
           L+FE+++++L K++    P   MDS L+K +LY IL GI +CH+R+++HRDL   NLL D
Sbjct: 78  LIFEFLSMDLKKYLDSIPPGQYMDSSLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLID 137

Query: 75  IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            +  T+K+ AD G+A+    P   +T E+V L YR+P++L G       +D+W++
Sbjct: 138 -DKGTIKL-ADFGLARAFGIPIRVYTHEVVTLWYRSPEVLLGSARYSTPVDIWSI 190

Plays a key role in the control of the eukaryotic cell cycle by modulating the centrosome cycle as well as mitotic onset; promotes G2-M transition, and regulates G1 progress and G1-S transition via association with multiple interphase cyclins. Required in higher cells for entry into S-phase and mitosis. Phosphorylates PARVA/actopaxin, APC, AMPH, APC, BARD1, Bcl-xL/BCL2L1, BRCA2, CALD1, CASP8, CDC7, CDC20, CDC25A, CDC25C, CC2D1A, CSNK2 proteins/CKII, FZR1/CDH1, CDK7, CEBPB, CHAMP1, DMD/dystrophin, EEF1 proteins/EF-1, EZH2, KIF11/EG5, EGFR, FANCG, FOS, GFAP, GOLGA2/GM130, GRASP1, UBE2A/hHR6A, HIST1H1 proteins/histone H1, HMGA1, HIVEP3/KRC, LMNA, LMNB, LMNC, LBR, LATS1, MAP1B, MAP4, MARCKS, MCM2, MCM4, MKLP1, MYB, NEFH, NFIC, NPC/nuclear pore complex, PITPNM1/NIR2, NPM1, NCL, NUCKS1, NPM1/numatrin, ORC1, PRKAR2A, EEF1E1/p18, EIF3F/p47, p53/TP53, NONO/p54NRB, PAPOLA, PLEC/plectin, RB1, UL40/R2, RAB4A, RAP1GAP, RCC1, RPS6KB1/S6K1, KHDRBS1/SAM68, ESPL1, SKI, BIRC5/survivin, STIP1, TEX14, beta-tubulins, MAPT/TAU, NEDD1, VIM/vimentin, TK1, FOXO1, RUNX1/AML1 and RUNX2. CDK1/CDC2-cyclin-B controls pronuclear union in interphase fertilized eggs. Essential for early stages of embryonic development. During G2 and early mitosis, CDC25A/B/C-mediated dephosphorylation activates CDK1/cyclin complexes which phosphorylate several substrates that trigger at least centrosome separation, Golgi dynamics, nuclear envelope breakdown and chromosome condensation. Once chromosomes are condensed and aligned at the metaphase plate, CDK1 activity is switched off by WEE1- and PKMYT1-mediated phosphorylation to allow sister chromatid separation, chromosome decondensation, reformation of the nuclear envelope and cytokinesis. Inactivated by PKR/EIF2AK2- and WEE1-mediated phosphorylation upon DNA damage to stop cell cycle and genome replication at the G2 checkpoint thus facilitating DNA repair. Reactivated after successful DNA repair through WIP1-dependent signaling leading to CDC25A/B/C-mediated dephosphorylation and restoring cell cycle progression. In proliferating cells, CDK1-mediated FOXO1 phosphorylation at the G2-M phase represses FOXO1 interaction with 14-3-3 proteins and thereby promotes FOXO1 nuclear accumulation and transcription factor activity, leading to cell death of postmitotic neurons. The phosphorylation of beta-tubulins regulates microtubule dynamics during mitosis. NEDD1 phosphorylation promotes PLK1-mediated NEDD1 phosphorylation and subsequent targeting of the gamma-tubulin ring complex (gTuRC) to the centrosome, an important step for spindle formation. In addition, CC2D1A phosphorylation regulates CC2D1A spindle pole localization and association with SCC1/RAD21 and centriole cohesion during mitosis. The phosphorylation of Bcl-xL/BCL2L1 after prolongated G2 arrest upon DNA damage triggers apoptosis. In contrast, CASP8 phosphorylation during mitosis prevents its activation by proteolysis and subsequent apoptosis. This phosphorylation occurs in cancer cell lines, as well as in primary breast tissues and lymphocytes. EZH2 phosphorylation promotes H3K27me3 maintenance and epigenetic gene silencing. CALD1 phosphorylation promotes Schwann cell migration during peripheral nerve regeneration.

Pongo abelii (taxid: 9601)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

>sp|P06493|CDK1_HUMAN Cyclin-dependent kinase 1 OS=Homo sapiens GN=CDK1 PE=1 SV=3

 Score = 99.0 bits (245), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 46/115 (40%), Positives = 75/115 (65%), Gaps = 5/115 (4%)

Query: 18  LVFEYVNINLHKFIQQYHP---MDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
           L+FE+++++L K++    P   MDS L+K +LY IL GI +CH+R+++HRDL   NLL D
Sbjct: 78  LIFEFLSMDLKKYLDSIPPGQYMDSSLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLID 137

Query: 75  IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            +  T+K+ AD G+A+    P   +T E+V L YR+P++L G       +D+W++
Sbjct: 138 -DKGTIKL-ADFGLARAFGIPIRVYTHEVVTLWYRSPEVLLGSARYSTPVDIWSI 190

Plays a key role in the control of the eukaryotic cell cycle by modulating the centrosome cycle as well as mitotic onset; promotes G2-M transition, and regulates G1 progress and G1-S transition via association with multiple interphase cyclins. Required in higher cells for entry into S-phase and mitosis. Phosphorylates PARVA/actopaxin, APC, AMPH, APC, BARD1, Bcl-xL/BCL2L1, BRCA2, CALD1, CASP8, CDC7, CDC20, CDC25A, CDC25C, CC2D1A, CSNK2 proteins/CKII, FZR1/CDH1, CDK7, CEBPB, CHAMP1, DMD/dystrophin, EEF1 proteins/EF-1, EZH2, KIF11/EG5, EGFR, FANCG, FOS, GFAP, GOLGA2/GM130, GRASP1, UBE2A/hHR6A, HIST1H1 proteins/histone H1, HMGA1, HIVEP3/KRC, LMNA, LMNB, LMNC, LBR, LATS1, MAP1B, MAP4, MARCKS, MCM2, MCM4, MKLP1, MYB, NEFH, NFIC, NPC/nuclear pore complex, PITPNM1/NIR2, NPM1, NCL, NUCKS1, NPM1/numatrin, ORC1, PRKAR2A, EEF1E1/p18, EIF3F/p47, p53/TP53, NONO/p54NRB, PAPOLA, PLEC/plectin, RB1, UL40/R2, RAB4A, RAP1GAP, RCC1, RPS6KB1/S6K1, KHDRBS1/SAM68, ESPL1, SKI, BIRC5/survivin, STIP1, TEX14, beta-tubulins, MAPT/TAU, NEDD1, VIM/vimentin, TK1, FOXO1, RUNX1/AML1 and RUNX2. CDK1/CDC2-cyclin-B controls pronuclear union in interphase fertilized eggs. Essential for early stages of embryonic development. During G2 and early mitosis, CDC25A/B/C-mediated dephosphorylation activates CDK1/cyclin complexes which phosphorylate several substrates that trigger at least centrosome separation, Golgi dynamics, nuclear envelope breakdown and chromosome condensation. Once chromosomes are condensed and aligned at the metaphase plate, CDK1 activity is switched off by WEE1- and PKMYT1-mediated phosphorylation to allow sister chromatid separation, chromosome decondensation, reformation of the nuclear envelope and cytokinesis. Inactivated by PKR/EIF2AK2- and WEE1-mediated phosphorylation upon DNA damage to stop cell cycle and genome replication at the G2 checkpoint thus facilitating DNA repair. Reactivated after successful DNA repair through WIP1-dependent signaling leading to CDC25A/B/C-mediated dephosphorylation and restoring cell cycle progression. In proliferating cells, CDK1-mediated FOXO1 phosphorylation at the G2-M phase represses FOXO1 interaction with 14-3-3 proteins and thereby promotes FOXO1 nuclear accumulation and transcription factor activity, leading to cell death of postmitotic neurons. The phosphorylation of beta-tubulins regulates microtubule dynamics during mitosis. NEDD1 phosphorylation promotes PLK1-mediated NEDD1 phosphorylation and subsequent targeting of the gamma-tubulin ring complex (gTuRC) to the centrosome, an important step for spindle formation. In addition, CC2D1A phosphorylation regulates CC2D1A spindle pole localization and association with SCC1/RAD21 and centriole cohesion during mitosis. The phosphorylation of Bcl-xL/BCL2L1 after prolongated G2 arrest upon DNA damage triggers apoptosis. In contrast, CASP8 phosphorylation during mitosis prevents its activation by proteolysis and subsequent apoptosis. This phosphorylation occurs in cancer cell lines, as well as in primary breast tissues and lymphocytes. EZH2 phosphorylation promotes H3K27me3 maintenance and epigenetic gene silencing. CALD1 phosphorylation promotes Schwann cell migration during peripheral nerve regeneration.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

>sp|P39951|CDK1_RAT Cyclin-dependent kinase 1 OS=Rattus norvegicus GN=Cdk1 PE=1 SV=1

 Score = 99.0 bits (245), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 46/115 (40%), Positives = 75/115 (65%), Gaps = 5/115 (4%)

Query: 18  LVFEYVNINLHKFIQQYHP---MDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
           L+FE+++++L K++    P   MDS L+K +LY IL GI +CH+R+++HRDL   NLL D
Sbjct: 78  LIFEFLSMDLKKYLDSIPPGQFMDSSLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLID 137

Query: 75  IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            +  T+K+ AD G+A+    P   +T E+V L YR+P++L G       +D+W++
Sbjct: 138 -DKGTIKL-ADFGLARAFGIPIRVYTHEVVTLWYRSPEVLLGSARYSTPVDIWSI 190

Plays a key role in the control of the eukaryotic cell cycle by modulating the centrosome cycle as well as mitotic onset; promotes G2-M transition, and regulates G1 progress and G1-S transition via association with multiple interphase cyclins. Required in higher cells for entry into S-phase and mitosis. Phosphorylates PARVA/actopaxin, APC, AMPH, APC, BARD1, Bcl-xL/BCL2L1, BRCA2, CALD1, CASP8, CDC7, CDC20, CDC25A, CDC25C, CC2D1A, CSNK2 proteins/CKII, FZR1/CDH1, CDK7, CEBPB, CHAMP1, DMD/dystrophin, EEF1 proteins/EF-1, EZH2, KIF11/EG5, EGFR, FANCG, FOS, GFAP, GOLGA2/GM130, GRASP1, UBE2A/hHR6A, HIST1H1 proteins/histone H1, HMGA1, HIVEP3/KRC, LMNA, LMNB, LMNC, LBR, LATS1, MAP1B, MAP4, MARCKS, MCM2, MCM4, MKLP1, MYB, NEFH, NFIC, NPC/nuclear pore complex, PITPNM1/NIR2, NPM1, NCL, NUCKS1, NPM1/numatrin, ORC1, PRKAR2A, EEF1E1/p18, EIF3F/p47, p53/TP53, NONO/p54NRB, PAPOLA, PLEC/plectin, RB1, UL40/R2, RAB4A, RAP1GAP, RCC1, RPS6KB1/S6K1, KHDRBS1/SAM68, ESPL1, SKI, BIRC5/survivin, STIP1, TEX14, beta-tubulins, MAPT/TAU, NEDD1, VIM/vimentin, TK1, FOXO1, RUNX1/AML1 and RUNX2. CDK1/CDC2-cyclin-B controls pronuclear union in interphase fertilized eggs. Essential for early stages of embryonic development. During G2 and early mitosis, CDC25A/B/C-mediated dephosphorylation activates CDK1/cyclin complexes which phosphorylate several substrates that trigger at least centrosome separation, Golgi dynamics, nuclear envelope breakdown and chromosome condensation. Once chromosomes are condensed and aligned at the metaphase plate, CDK1 activity is switched off by WEE1- and PKMYT1-mediated phosphorylation to allow sister chromatid separation, chromosome decondensation, reformation of the nuclear envelope and cytokinesis. Inactivated by PKR/EIF2AK2- and WEE1-mediated phosphorylation upon DNA damage to stop cell cycle and genome replication at the G2 checkpoint thus facilitating DNA repair. Reactivated after successful DNA repair through WIP1-dependent signaling leading to CDC25A/B/C-mediated dephosphorylation and restoring cell cycle progression. In proliferating cells, CDK1-mediated FOXO1 phosphorylation at the G2-M phase represses FOXO1 interaction with 14-3-3 proteins and thereby promotes FOXO1 nuclear accumulation and transcription factor activity, leading to cell death of postmitotic neurons. The phosphorylation of beta-tubulins regulates microtubule dynamics during mitosis. NEDD1 phosphorylation promotes PLK1-mediated NEDD1 phosphorylation and subsequent targeting of the gamma-tubulin ring complex (gTuRC) to the centrosome, an important step for spindle formation. In addition, CC2D1A phosphorylation regulates CC2D1A spindle pole localization and association with SCC1/RAD21 and centriole cohesion during mitosis. The phosphorylation of Bcl-xL/BCL2L1 after prolongated G2 arrest upon DNA damage triggers apoptosis. In contrast, CASP8 phosphorylation during mitosis prevents its activation by proteolysis and subsequent apoptosis. This phosphorylation occurs in cancer cell lines, as well as in primary breast tissues and lymphocytes. EZH2 phosphorylation promotes H3K27me3 maintenance and epigenetic gene silencing (By similarity). CALD1 phosphorylation promotes Schwann cell migration during peripheral nerve regeneration.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

>sp|Q05006|CDC22_MEDSA Cell division control protein 2 homolog 2 OS=Medicago sativa GN=CDC2B PE=2 SV=1

 Score = 97.1 bits (240), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 52/119 (43%), Positives = 72/119 (60%), Gaps = 3/119 (2%)

Query: 13  HKRENLVFEYVNINLHKFIQQYHPM--DSHLIKKFLYCILSGISYCHARKIIHRDLTTMN 70
            KR  LVFEY++++L KF+        D   IK FLY IL GI+YCH+ +++HRDL   N
Sbjct: 73  EKRLYLVFEYLDLDLKKFMDSSPEFAKDQRQIKMFLYQILCGIAYCHSHRVLHRDLKPQN 132

Query: 71  LLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           LL D  +  VK+ AD G+A+    P    T E+V L YRAP+IL G  +    +D+W+V
Sbjct: 133 LLIDRSSNAVKL-ADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSV 190

Plays a key role in the control of the eukaryotic cell cycle. Component of the kinase complex that phosphorylates the repetitive C-terminus of RNA polymerase II.

Medicago sativa (taxid: 3879)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 2

>sp|P11440|CDK1_MOUSE Cyclin-dependent kinase 1 OS=Mus musculus GN=Cdk1 PE=1 SV=3

 Score = 96.7 bits (239), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 75/115 (65%), Gaps = 5/115 (4%)

Query: 18  LVFEYVNINLHKFIQQYHP---MDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
           L+FE+++++L K++    P   MDS L+K +L+ IL GI +CH+R+++HRDL   NLL D
Sbjct: 78  LIFEFLSMDLKKYLDSIPPGQFMDSSLVKSYLHQILQGIVFCHSRRVLHRDLKPQNLLID 137

Query: 75  IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            +  T+K+ AD G+A+    P   +T E+V L YR+P++L G       +D+W++
Sbjct: 138 -DKGTIKL-ADFGLARAFGIPIRVYTHEVVTLWYRSPEVLLGSARYSTPVDIWSI 190

Plays a key role in the control of the eukaryotic cell cycle by modulating the centrosome cycle as well as mitotic onset; promotes G2-M transition, and regulates G1 progress and G1-S transition via association with multiple interphase cyclins. Required in higher cells for entry into S-phase and mitosis. Phosphorylates PARVA/actopaxin, APC, AMPH, APC, BARD1, Bcl-xL/BCL2L1, BRCA2, CALD1, CASP8, CDC7, CDC20, CDC25A, CDC25C, CC2D1A, CSNK2 proteins/CKII, FZR1/CDH1, CDK7, CEBPB, CHAMP1, DMD/dystrophin, EEF1 proteins/EF-1, EZH2, KIF11/EG5, EGFR, FANCG, FOS, GFAP, GOLGA2/GM130, GRASP1, UBE2A/hHR6A, HIST1H1 proteins/histone H1, HMGA1, HIVEP3/KRC, LMNA, LMNB, LMNC, LBR, LATS1, MAP1B, MAP4, MARCKS, MCM2, MCM4, MKLP1, MYB, NEFH, NFIC, NPC/nuclear pore complex, PITPNM1/NIR2, NPM1, NCL, NUCKS1, NPM1/numatrin, ORC1, PRKAR2A, EEF1E1/p18, EIF3F/p47, p53/TP53, NONO/p54NRB, PAPOLA, PLEC/plectin, RB1, UL40/R2, RAB4A, RAP1GAP, RCC1, RPS6KB1/S6K1, KHDRBS1/SAM68, ESPL1, SKI, BIRC5/survivin, STIP1, TEX14, beta-tubulins, MAPT/TAU, NEDD1, VIM/vimentin, TK1, FOXO1, RUNX1/AML1 and RUNX2. CDK1/CDC2-cyclin-B controls pronuclear union in interphase fertilized eggs. Essential for early stages of embryonic development. During G2 and early mitosis, CDC25A/B/C-mediated dephosphorylation activates CDK1/cyclin complexes which phosphorylate several substrates that trigger at least centrosome separation, Golgi dynamics, nuclear envelope breakdown and chromosome condensation. Once chromosomes are condensed and aligned at the metaphase plate, CDK1 activity is switched off by WEE1- and PKMYT1-mediated phosphorylation to allow sister chromatid separation, chromosome decondensation, reformation of the nuclear envelope and cytokinesis. Inactivated by PKR/EIF2AK2- and WEE1-mediated phosphorylation upon DNA damage to stop cell cycle and genome replication at the G2 checkpoint thus facilitating DNA repair. Reactivated after successful DNA repair through WIP1-dependent signaling leading to CDC25A/B/C-mediated dephosphorylation and restoring cell cycle progression. In proliferating cells, CDK1-mediated FOXO1 phosphorylation at the G2-M phase represses FOXO1 interaction with 14-3-3 proteins and thereby promotes FOXO1 nuclear accumulation and transcription factor activity, leading to cell death of postmitotic neurons. The phosphorylation of beta-tubulins regulates microtubule dynamics during mitosis. NEDD1 phosphorylation promotes PLK1-mediated NEDD1 phosphorylation and subsequent targeting of the gamma-tubulin ring complex (gTuRC) to the centrosome, an important step for spindle formation. In addition, CC2D1A phosphorylation regulates CC2D1A spindle pole localization and association with SCC1/RAD21 and centriole cohesion during mitosis. The phosphorylation of Bcl-xL/BCL2L1 after prolongated G2 arrest upon DNA damage triggers apoptosis. In contrast, CASP8 phosphorylation during mitosis prevents its activation by proteolysis and subsequent apoptosis. This phosphorylation occurs in cancer cell lines, as well as in primary breast tissues and lymphocytes. EZH2 phosphorylation promotes H3K27me3 maintenance and epigenetic gene silencing. CALD1 phosphorylation promotes Schwann cell migration during peripheral nerve regeneration.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

>sp|Q38774|CDC2C_ANTMA Cell division control protein 2 homolog C OS=Antirrhinum majus GN=CDC2C PE=2 SV=1

 Score = 96.3 bits (238), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 47/118 (39%), Positives = 72/118 (61%), Gaps = 7/118 (5%)

Query: 18  LVFEYVNINLHKFIQQYH------PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNL 71
           LVFEY++ +L KFI  +       P+    I+ FL+ +  G+S+CHA  ++HRDL   NL
Sbjct: 85  LVFEYLDTDLKKFIDSHRKGPNPRPLPPQQIQSFLFQLCKGVSHCHAHGVLHRDLKPQNL 144

Query: 72  LADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           L D +   +KI AD G+A+    P  ++T E+V L YRAP++L G ++   A+DM +V
Sbjct: 145 LLDKDKGVLKI-ADLGLARAFTVPLKSYTHEIVTLSYRAPEVLLGSSHYSTAVDMSSV 201

Plays a key role in the control of the eukaryotic cell cycle.

Antirrhinum majus (taxid: 4151)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

>sp|P25859|CKB11_ARATH Cyclin-dependent kinase B1-1 OS=Arabidopsis thaliana GN=CDKB1-1 PE=1 SV=2

 Score = 95.9 bits (237), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 45/118 (38%), Positives = 73/118 (61%), Gaps = 7/118 (5%)

Query: 18  LVFEYVNINLHKFIQQYH------PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNL 71
           LVFEY++ +L KFI  Y       P++  LI+K ++ +  G+++CH+  ++HRDL   NL
Sbjct: 89  LVFEYLDTDLKKFIDSYRKGPNPKPLEPFLIQKLMFQLCKGVAHCHSHGVLHRDLKPQNL 148

Query: 72  LADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           L   + + +KIA D G+ +    P  ++T E+V L YRAP++L G T+    +DMW+V
Sbjct: 149 LLVKDKELLKIA-DLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTGVDMWSV 205

May control G2/M (mitosis) phase progression. Plays a role in regulating seedling growth in darkness via regulation of hypocotyl cell elongation and cotyledon cell development. Plays a role in stomatal development. Required to suppress endoreduplication.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	135
9885799	303	cyclin-dependent kinase B1-1 [Nicotiana	0.822	0.366	0.406	1e-19
9885801	303	cyclin-dependent kinase B1-2 [Nicotiana	0.822	0.366	0.406	1e-19
326490626	309	predicted protein [Hordeum vulgare subsp	0.822	0.359	0.389	1e-19
168013022	302	predicted protein [Physcomitrella patens	0.822	0.367	0.401	1e-19
442745995	252	Putative cyclin-dependent kinase cdk5, p	0.814	0.436	0.417	2e-19
21304629	264	cyclin-dependent kinase 1 [Axinella corr	0.814	0.416	0.446	2e-19
56785267	303	putative cyclin-dependent kinase B1-2 [O	0.822	0.366	0.389	2e-19
218189528	303	hypothetical protein OsI_04781 [Oryza sa	0.822	0.366	0.389	2e-19
75329666	303	RecName: Full=Cyclin-dependent kinase B1	0.822	0.366	0.389	2e-19
79324650	311	cyclin-dependent kinase B1-2 [Arabidopsi	0.822	0.356	0.381	3e-19

>gi|9885799|gb|AAG01532.1|AF289465_1 cyclin-dependent kinase B1-1 [Nicotiana tabacum]

 Score =  101 bits (251), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 48/118 (40%), Positives = 73/118 (61%), Gaps = 7/118 (5%)

Query: 18  LVFEYVNINLHKFIQQYH------PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNL 71
           LVFEY++ +L KF+  +       P+   LI+ FLY +  G+++CH+  ++HRDL   NL
Sbjct: 83  LVFEYLDTDLKKFVDSHRKGPNPRPLPPSLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNL 142

Query: 72  LADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           L D E   +KI AD G+ +    P  ++T E+V L YRAP++L G T+   A+DMW+V
Sbjct: 143 LVDKEKGILKI-ADLGLGRAFTVPIKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSV 199

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|9885801|gb|AAG01533.1|AF289466_1 cyclin-dependent kinase B1-2 [Nicotiana tabacum]

 Score =  101 bits (251), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 48/118 (40%), Positives = 73/118 (61%), Gaps = 7/118 (5%)

Query: 18  LVFEYVNINLHKFIQQYH------PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNL 71
           LVFEY++ +L KF+  +       P+   LI+ FLY +  G+++CH+  ++HRDL   NL
Sbjct: 83  LVFEYLDTDLKKFVDSHRKGPNPRPLPPSLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNL 142

Query: 72  LADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           L D E   +KI AD G+ +    P  ++T E+V L YRAP++L G T+   A+DMW+V
Sbjct: 143 LVDKEKGILKI-ADLGLGRAFTVPIKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSV 199

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326490626|dbj|BAJ89980.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326499548|dbj|BAJ86085.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score =  100 bits (250), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 46/118 (38%), Positives = 74/118 (62%), Gaps = 7/118 (5%)

Query: 18  LVFEYVNINLHKFIQQYH------PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNL 71
           LVFE+++ +L KF+  Y       P+ +H++K FLY +  GI++CH   ++HRDL   NL
Sbjct: 89  LVFEFLDTDLKKFVDAYRRGPAPKPLPTHVVKSFLYQLCKGIAHCHGHGVLHRDLKPQNL 148

Query: 72  LADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           L D E   +KI AD G+++    P  ++T E+V L YRAP++L G T+    +D+W++
Sbjct: 149 LVDKEKMILKI-ADLGLSRAFTVPMKSYTHEIVTLWYRAPEVLLGATHYSTGVDIWSI 205

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|168013022|ref|XP_001759200.1| predicted protein [Physcomitrella patens subsp. patens] gi|162689513|gb|EDQ75884.1| predicted protein [Physcomitrella patens subsp. patens]

 Score =  100 bits (250), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 47/117 (40%), Positives = 73/117 (62%), Gaps = 6/117 (5%)

Query: 18  LVFEYVNINLHKFIQQY-----HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLL 72
           LVFEY++ +L KFI  Y     +P+ +  I+ F+Y +L G+++CH   ++HRDL   NLL
Sbjct: 83  LVFEYLDSDLKKFIDSYGRGSGNPIPAKTIQSFMYQLLKGVAHCHGHGVMHRDLKPQNLL 142

Query: 73  ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            D E   +KI AD G+ +    P  ++T E+V L YRAP++L G +    ++DMW+V
Sbjct: 143 VDKEKGLLKI-ADLGLGRAFTIPLKSYTHEIVTLWYRAPEVLLGSSQYSTSVDMWSV 198

Source: Physcomitrella patens subsp. patens

Species: Physcomitrella patens

Genus: Physcomitrella

Family: Funariaceae

Order: Funariales

Class: Bryopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|442745995|gb|JAA65157.1| Putative cyclin-dependent kinase cdk5, partial [Ixodes ricinus]

 Score =  100 bits (250), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 48/115 (41%), Positives = 75/115 (65%), Gaps = 5/115 (4%)

Query: 18  LVFEYVNINLHKFIQQYHP---MDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
           L+FEY++++L K++    P   MDS L+K +LY IL GI +CH+R+++HRDL   NLL D
Sbjct: 71  LIFEYLSMDLKKYLDSIPPGQFMDSSLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLID 130

Query: 75  IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            +  T+K+ AD G+A+    P   +T E+V L YR+P+IL G       +D+W++
Sbjct: 131 -DKGTIKL-ADFGLARAFGIPIRVYTHEVVTLWYRSPEILLGSARYSTPVDIWSI 183

Source: Ixodes ricinus

Species: Ixodes ricinus

Genus: Ixodes

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|21304629|gb|AAM45437.1|AF305777_1 cyclin-dependent kinase 1 [Axinella corrugata]

 Score =  100 bits (249), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 50/112 (44%), Positives = 72/112 (64%), Gaps = 2/112 (1%)

Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           L+FE++ ++L KF+     MD +L+K + Y IL GI +CH R++IHRDL   NLL D E 
Sbjct: 68  LIFEFLTMDLKKFMDTKTKMDMNLVKSYTYQILQGILFCHQRRVIHRDLKPQNLLIDKEG 127

Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            ++KI AD G+A+    P   +T E+V L YRAP+IL G T     ID+W++
Sbjct: 128 -SIKI-ADFGLARAFGVPVRVYTHEVVTLWYRAPEILLGATKYSCPIDIWSI 177

Source: Axinella corrugata

Species: Axinella corrugata

Genus: Axinella

Family: Axinellidae

Order: Halichondrida

Class: Demospongiae

Phylum: Porifera

Superkingdom: Eukaryota

>gi|56785267|dbj|BAD82176.1| putative cyclin-dependent kinase B1-2 [Oryza sativa Japonica Group]

 Score =  100 bits (249), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 46/118 (38%), Positives = 73/118 (61%), Gaps = 7/118 (5%)

Query: 18  LVFEYVNINLHKFIQQYH------PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNL 71
           LVFE+++ +L KF+  Y       P+ +++IK FLY +  G+++CH   ++HRDL   NL
Sbjct: 83  LVFEFLDTDLKKFVDAYRKGPNPRPLPTNVIKSFLYQLCKGVAHCHGHGVLHRDLKPQNL 142

Query: 72  LADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           L D E   +KI AD G+ +    P  ++T E+V L YRAP++L G T+    +D+W+V
Sbjct: 143 LVDKEKGILKI-ADLGLGRAFTVPMKSYTHEIVTLWYRAPEVLLGSTHYSTGVDIWSV 199

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|218189528|gb|EEC71955.1| hypothetical protein OsI_04781 [Oryza sativa Indica Group]

 Score =  100 bits (249), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 46/118 (38%), Positives = 73/118 (61%), Gaps = 7/118 (5%)

Query: 18  LVFEYVNINLHKFIQQYH------PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNL 71
           LVFE+++ +L KF+  Y       P+ +++IK FLY +  G+++CH   ++HRDL   NL
Sbjct: 83  LVFEFLDTDLKKFVDAYRKGPNPRPLPTNVIKSFLYQLCKGVAHCHGHGVLHRDLKPQNL 142

Query: 72  LADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           L D E   +KI AD G+ +    P  ++T E+V L YRAP++L G T+    +D+W+V
Sbjct: 143 LVDKEKGILKI-ADLGLGRAFTVPMKSYTHEIVTLWYRAPEVLLGSTHYSTGVDIWSV 199

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|75329666|sp|Q8L4P8.1|CKB11_ORYSJ RecName: Full=Cyclin-dependent kinase B1-1; Short=CDKB1;1; Short=CDKB;1 gi|21952860|dbj|BAC06275.1| putative cyclin-dependent kinase B1-1 [Oryza sativa Japonica Group] gi|94467444|dbj|BAE93883.1| cyclin-dependent kinase [Oryza sativa Japonica Group] gi|222619677|gb|EEE55809.1| hypothetical protein OsJ_04403 [Oryza sativa Japonica Group]

 Score =  100 bits (248), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 46/118 (38%), Positives = 73/118 (61%), Gaps = 7/118 (5%)

Query: 18  LVFEYVNINLHKFIQQYH------PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNL 71
           LVFE+++ +L KF+  Y       P+ +++IK FLY +  G+++CH   ++HRDL   NL
Sbjct: 83  LVFEFLDTDLKKFVDAYRKGPNPRPLPTNVIKSFLYQLCKGVAHCHGHGVLHRDLKPQNL 142

Query: 72  LADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           L D E   +KI AD G+ +    P  ++T E+V L YRAP++L G T+    +D+W+V
Sbjct: 143 LVDKEKGILKI-ADLGLGRAFTVPMKSYTHEIVTLWYRAPEVLLGSTHYSTGVDIWSV 199

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|79324650|ref|NP_001031507.1| cyclin-dependent kinase B1-2 [Arabidopsis thaliana] gi|152013423|sp|Q2V419.2|CKB12_ARATH RecName: Full=Cyclin-dependent kinase B1-2; Short=CDKB1;2 gi|3786010|gb|AAC67356.1| putative cell division control protein kinase [Arabidopsis thaliana] gi|13275212|emb|CAC34053.1| cyclin dependent kinase [Arabidopsis thaliana] gi|330254464|gb|AEC09558.1| cyclin-dependent kinase B1-2 [Arabidopsis thaliana]

 Score =  100 bits (248), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 45/118 (38%), Positives = 77/118 (65%), Gaps = 7/118 (5%)

Query: 18  LVFEYVNINLHKFIQQYH------PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNL 71
           LVFEY++ +L KFI  +       P+++ L+++F++ +  G+++CH+  ++HRDL   NL
Sbjct: 91  LVFEYLDTDLKKFIDSHRKGSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNL 150

Query: 72  LADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           L D +   +KI AD G+++    P  A+T E+V L YRAP++L G T+   A+D+W+V
Sbjct: 151 LLDKDKGILKI-ADLGLSRAFTVPLKAYTHEIVTLWYRAPEVLLGSTHYSTAVDIWSV 207

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	135
UNIPROTKB|P48734	297	CDK1 "Cyclin-dependent kinase	0.814	0.370	0.4	1e-20
UNIPROTKB|E2RGJ9	297	CDK1 "Uncharacterized protein"	0.814	0.370	0.4	1e-20
UNIPROTKB|J9P1S6	278	CDK1 "Uncharacterized protein"	0.814	0.395	0.4	1e-20
UNIPROTKB|P06493	297	CDK1 "Cyclin-dependent kinase	0.814	0.370	0.4	1e-20
UNIPROTKB|C0SW08	297	CDC2 "Uncharacterized protein"	0.814	0.370	0.4	1e-20
UNIPROTKB|Q5RCH1	297	CDK1 "Cyclin-dependent kinase	0.814	0.370	0.4	1e-20
RGD|2319	297	Cdk1 "cyclin-dependent kinase	0.814	0.370	0.4	1e-20
TAIR|locus:2099478	294	CDC2 "cell division control 2"	0.866	0.397	0.426	2.1e-20
TAIR|locus:2064087	311	CDKB1;2 "cyclin-dependent kina	0.822	0.356	0.381	2.7e-20
UNIPROTKB|P29618	294	CDKA-1 "Cyclin-dependent kinas	0.851	0.391	0.423	3.5e-20

UNIPROTKB|P48734 CDK1 "Cyclin-dependent kinase 1" [Bos taurus (taxid:9913)]

 Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
 Identities = 46/115 (40%), Positives = 75/115 (65%)

Query:    18 LVFEYVNINLHKFIQQYHP---MDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
             L+FE+++++L K++    P   MDS L+K +LY IL GI +CH+R+++HRDL   NLL D
Sbjct:    78 LIFEFLSMDLKKYLDSIPPGQFMDSSLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLID 137

Query:    75 IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
              +  T+K+A D G+A+    P   +T E+V L YR+P++L G       +D+W++
Sbjct:   138 -DKGTIKLA-DFGLARAFGIPIRVYTHEVVTLWYRSPEVLLGSARYSTPVDIWSI 190

GO:0030496 "midbody" evidence=ISS

GO:0043066 "negative regulation of apoptotic process" evidence=ISS

GO:0005876 "spindle microtubule" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0004693 "cyclin-dependent protein serine/threonine kinase activity" evidence=ISS

GO:0005815 "microtubule organizing center" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0034501 "protein localization to kinetochore" evidence=IEA

GO:0030544 "Hsp70 protein binding" evidence=IEA

GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IEA

GO:0008353 "RNA polymerase II carboxy-terminal domain kinase activity" evidence=IEA

GO:0051301 "cell division" evidence=IEA

GO:0007067 "mitosis" evidence=IEA

GO:0006915 "apoptotic process" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|E2RGJ9 CDK1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
 Identities = 46/115 (40%), Positives = 75/115 (65%)

Query:    18 LVFEYVNINLHKFIQQYHP---MDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
             L+FE+++++L K++    P   MDS L+K +LY IL GI +CH+R+++HRDL   NLL D
Sbjct:    78 LIFEFLSMDLKKYLDSIPPGQFMDSSLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLID 137

Query:    75 IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
              +  T+K+A D G+A+    P   +T E+V L YR+P++L G       +D+W++
Sbjct:   138 -DKGTIKLA-DFGLARAFGIPIRVYTHEVVTLWYRSPEVLLGSARYSTPVDIWSI 190

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

GO:0034501 "protein localization to kinetochore" evidence=IEA

GO:0030544 "Hsp70 protein binding" evidence=IEA

GO:0030496 "midbody" evidence=IEA

GO:0008353 "RNA polymerase II carboxy-terminal domain kinase activity" evidence=IEA

GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IEA

GO:0005876 "spindle microtubule" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004693 "cyclin-dependent protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|J9P1S6 CDK1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
 Identities = 46/115 (40%), Positives = 75/115 (65%)

Query:    18 LVFEYVNINLHKFIQQYHP---MDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
             L+FE+++++L K++    P   MDS L+K +LY IL GI +CH+R+++HRDL   NLL D
Sbjct:    78 LIFEFLSMDLKKYLDSIPPGQFMDSSLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLID 137

Query:    75 IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
              +  T+K+A D G+A+    P   +T E+V L YR+P++L G       +D+W++
Sbjct:   138 -DKGTIKLA-DFGLARAFGIPIRVYTHEVVTLWYRSPEVLLGSARYSTPVDIWSI 190

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|P06493 CDK1 "Cyclin-dependent kinase 1" [Homo sapiens (taxid:9606)]

 Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
 Identities = 46/115 (40%), Positives = 75/115 (65%)

Query:    18 LVFEYVNINLHKFIQQYHP---MDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
             L+FE+++++L K++    P   MDS L+K +LY IL GI +CH+R+++HRDL   NLL D
Sbjct:    78 LIFEFLSMDLKKYLDSIPPGQYMDSSLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLID 137

Query:    75 IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
              +  T+K+A D G+A+    P   +T E+V L YR+P++L G       +D+W++
Sbjct:   138 -DKGTIKLA-DFGLARAFGIPIRVYTHEVVTLWYRSPEVLLGSARYSTPVDIWSI 190

GO:0005524 "ATP binding" evidence=IEA

GO:0006915 "apoptotic process" evidence=IEA

GO:0007067 "mitosis" evidence=IEA

GO:0051301 "cell division" evidence=IEA

GO:0006461 "protein complex assembly" evidence=IEA

GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IEA

GO:0007569 "cell aging" evidence=IEA

GO:0009636 "response to toxic substance" evidence=IEA

GO:0010628 "positive regulation of gene expression" evidence=IEA

GO:0014070 "response to organic cyclic compound" evidence=IEA

GO:0014075 "response to amine stimulus" evidence=IEA

GO:0014823 "response to activity" evidence=IEA

GO:0030261 "chromosome condensation" evidence=IEA

GO:0030332 "cyclin binding" evidence=IEA

GO:0030544 "Hsp70 protein binding" evidence=IEA

GO:0031100 "organ regeneration" evidence=IEA

GO:0033160 "positive regulation of protein import into nucleus, translocation" evidence=IEA

GO:0035173 "histone kinase activity" evidence=IEA

GO:0042493 "response to drug" evidence=IEA

GO:0045471 "response to ethanol" evidence=IEA

GO:0045740 "positive regulation of DNA replication" evidence=IEA

GO:0045931 "positive regulation of mitotic cell cycle" evidence=IEA

GO:0046686 "response to cadmium ion" evidence=IEA

GO:0046688 "response to copper ion" evidence=IEA

GO:0048678 "response to axon injury" evidence=IEA

GO:0055015 "ventricular cardiac muscle cell development" evidence=IEA

GO:0060045 "positive regulation of cardiac muscle cell proliferation" evidence=IEA

GO:0070301 "cellular response to hydrogen peroxide" evidence=IEA

GO:0005815 "microtubule organizing center" evidence=IEA

GO:0004693 "cyclin-dependent protein serine/threonine kinase activity" evidence=IDA;TAS

GO:0008353 "RNA polymerase II carboxy-terminal domain kinase activity" evidence=IDA

GO:0005876 "spindle microtubule" evidence=IDA

GO:0030496 "midbody" evidence=IDA

GO:0043066 "negative regulation of apoptotic process" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0007098 "centrosome cycle" evidence=TAS

GO:0007344 "pronuclear fusion" evidence=TAS

GO:0045995 "regulation of embryonic development" evidence=TAS

GO:0006281 "DNA repair" evidence=TAS

GO:0006260 "DNA replication" evidence=TAS

GO:0000226 "microtubule cytoskeleton organization" evidence=TAS

GO:0014038 "regulation of Schwann cell differentiation" evidence=TAS

GO:0016477 "cell migration" evidence=TAS

GO:0005739 "mitochondrion" evidence=TAS

GO:0004672 "protein kinase activity" evidence=NAS

GO:0005634 "nucleus" evidence=IDA

GO:0000075 "cell cycle checkpoint" evidence=TAS

GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS

GO:0000083 "regulation of transcription involved in G1/S phase of mitotic cell cycle" evidence=TAS

GO:0000086 "G2/M transition of mitotic cell cycle" evidence=TAS

GO:0000165 "MAPK cascade" evidence=TAS

GO:0000186 "activation of MAPKK activity" evidence=TAS

GO:0000187 "activation of MAPK activity" evidence=TAS

GO:0000278 "mitotic cell cycle" evidence=TAS

GO:0002224 "toll-like receptor signaling pathway" evidence=TAS

GO:0002755 "MyD88-dependent toll-like receptor signaling pathway" evidence=TAS

GO:0002756 "MyD88-independent toll-like receptor signaling pathway" evidence=TAS

GO:0005654 "nucleoplasm" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

GO:0007173 "epidermal growth factor receptor signaling pathway" evidence=TAS

GO:0007264 "small GTPase mediated signal transduction" evidence=TAS

GO:0007265 "Ras protein signal transduction" evidence=TAS

GO:0007411 "axon guidance" evidence=TAS

GO:0008063 "Toll signaling pathway" evidence=TAS

GO:0008286 "insulin receptor signaling pathway" evidence=TAS

GO:0008543 "fibroblast growth factor receptor signaling pathway" evidence=TAS

GO:0031145 "anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process" evidence=TAS

GO:0034130 "toll-like receptor 1 signaling pathway" evidence=TAS

GO:0034134 "toll-like receptor 2 signaling pathway" evidence=TAS

GO:0034138 "toll-like receptor 3 signaling pathway" evidence=TAS

GO:0034142 "toll-like receptor 4 signaling pathway" evidence=TAS

GO:0035666 "TRIF-dependent toll-like receptor signaling pathway" evidence=TAS

GO:0045087 "innate immune response" evidence=TAS

GO:0048011 "neurotrophin TRK receptor signaling pathway" evidence=TAS

GO:0051403 "stress-activated MAPK cascade" evidence=TAS

GO:0051437 "positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle" evidence=TAS

GO:0051439 "regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle" evidence=TAS

GO:0034501 "protein localization to kinetochore" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

UNIPROTKB|C0SW08 CDC2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
 Identities = 46/115 (40%), Positives = 75/115 (65%)

Query:    18 LVFEYVNINLHKFIQQYHP---MDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
             L+FE+++++L K++    P   MDS L+K +LY IL GI +CH+R+++HRDL   NLL D
Sbjct:    78 LIFEFLSMDLKKYLDSIPPGQFMDSSLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLID 137

Query:    75 IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
              +  T+K+A D G+A+    P   +T E+V L YR+P++L G       +D+W++
Sbjct:   138 -DKGTIKLA-DFGLARAFGIPIRVYTHEVVTLWYRSPEVLLGSARYSTPVDIWSI 190

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

GO:0034501 "protein localization to kinetochore" evidence=IEA

GO:0030544 "Hsp70 protein binding" evidence=IEA

GO:0030496 "midbody" evidence=IEA

GO:0008353 "RNA polymerase II carboxy-terminal domain kinase activity" evidence=IEA

GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IEA

GO:0005876 "spindle microtubule" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004693 "cyclin-dependent protein serine/threonine kinase activity" evidence=IEA

GO:0051301 "cell division" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|Q5RCH1 CDK1 "Cyclin-dependent kinase 1" [Pongo abelii (taxid:9601)]

 Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
 Identities = 46/115 (40%), Positives = 75/115 (65%)

Query:    18 LVFEYVNINLHKFIQQYHP---MDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
             L+FE+++++L K++    P   MDS L+K +LY IL GI +CH+R+++HRDL   NLL D
Sbjct:    78 LIFEFLSMDLKKYLDSIPPGQYMDSSLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLID 137

Query:    75 IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
              +  T+K+A D G+A+    P   +T E+V L YR+P++L G       +D+W++
Sbjct:   138 -DKGTIKLA-DFGLARAFGIPIRVYTHEVVTLWYRSPEVLLGSARYSTPVDIWSI 190

GO:0004693 "cyclin-dependent protein serine/threonine kinase activity" evidence=ISS

RGD|2319 Cdk1 "cyclin-dependent kinase 1" [Rattus norvegicus (taxid:10116)]

 Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
 Identities = 46/115 (40%), Positives = 75/115 (65%)

Query:    18 LVFEYVNINLHKFIQQYHP---MDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
             L+FE+++++L K++    P   MDS L+K +LY IL GI +CH+R+++HRDL   NLL D
Sbjct:    78 LIFEFLSMDLKKYLDSIPPGQFMDSSLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLID 137

Query:    75 IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
              +  T+K+A D G+A+    P   +T E+V L YR+P++L G       +D+W++
Sbjct:   138 -DKGTIKLA-DFGLARAFGIPIRVYTHEVVTLWYRSPEVLLGSARYSTPVDIWSI 190

GO:0000080 "G1 phase of mitotic cell cycle" evidence=TAS

GO:0000278 "mitotic cell cycle" evidence=IEP

GO:0004693 "cyclin-dependent protein serine/threonine kinase activity" evidence=ISO;ISS

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0005737 "cytoplasm" evidence=ISO;IDA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005815 "microtubule organizing center" evidence=IEA

GO:0005876 "spindle microtubule" evidence=IEA;ISO

GO:0006461 "protein complex assembly" evidence=IDA

GO:0006468 "protein phosphorylation" evidence=ISO

GO:0006915 "apoptotic process" evidence=IEA

GO:0007067 "mitosis" evidence=IEA

GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IEA;ISO

GO:0007569 "cell aging" evidence=IDA

GO:0008353 "RNA polymerase II carboxy-terminal domain kinase activity" evidence=IEA;ISO

GO:0009636 "response to toxic substance" evidence=IEP

GO:0010243 "response to organic nitrogen" evidence=IDA

GO:0010628 "positive regulation of gene expression" evidence=IMP

GO:0014070 "response to organic cyclic compound" evidence=IEP

GO:0014075 "response to amine stimulus" evidence=IEP

GO:0014823 "response to activity" evidence=IEP

GO:0016301 "kinase activity" evidence=ISO

GO:0016572 "histone phosphorylation" evidence=IDA

GO:0030261 "chromosome condensation" evidence=IMP

GO:0030332 "cyclin binding" evidence=IPI

GO:0030496 "midbody" evidence=IEA;ISO

GO:0030544 "Hsp70 protein binding" evidence=IEA;ISO

GO:0031100 "organ regeneration" evidence=IMP

GO:0033160 "positive regulation of protein import into nucleus, translocation" evidence=IMP

GO:0034501 "protein localization to kinetochore" evidence=IEA;ISO

GO:0035173 "histone kinase activity" evidence=IDA

GO:0042493 "response to drug" evidence=IEP

GO:0042542 "response to hydrogen peroxide" evidence=IEP

GO:0043066 "negative regulation of apoptotic process" evidence=IEA;ISO

GO:0045471 "response to ethanol" evidence=IDA

GO:0045740 "positive regulation of DNA replication" evidence=IMP

GO:0045931 "positive regulation of mitotic cell cycle" evidence=IMP

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0046688 "response to copper ion" evidence=IEP

GO:0048678 "response to axon injury" evidence=IEP

GO:0051301 "cell division" evidence=IEA

GO:0055015 "ventricular cardiac muscle cell development" evidence=IEP

GO:0060045 "positive regulation of cardiac muscle cell proliferation" evidence=IMP

GO:0070301 "cellular response to hydrogen peroxide" evidence=IEP

TAIR|locus:2099478 CDC2 "cell division control 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
 Identities = 52/122 (42%), Positives = 75/122 (61%)

Query:    12 VH--KRENLVFEYVNINLHKFIQQYHPM--DSHLIKKFLYCILSGISYCHARKIIHRDLT 67
             VH  KR  LVFEY++++L K +        D H+IK +LY IL GI+YCH+ +++HRDL 
Sbjct:    70 VHSEKRLYLVFEYLDLDLKKHMDSTPDFSKDLHMIKTYLYQILRGIAYCHSHRVLHRDLK 129

Query:    68 TMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMW 127
               NLL D    ++K+A D G+A+    P    T E+V L YRAP+IL G  +    +D+W
Sbjct:   130 PQNLLIDRRTNSLKLA-DFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSHHYSTPVDIW 188

Query:   128 AV 129
             +V
Sbjct:   189 SV 190

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0016301 "kinase activity" evidence=ISS;IMP

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0042023 "DNA endoreduplication" evidence=RCA;IMP

GO:0009555 "pollen development" evidence=IMP

GO:0008284 "positive regulation of cell proliferation" evidence=IMP

GO:0009793 "embryo development ending in seed dormancy" evidence=IMP

GO:0005886 "plasma membrane" evidence=IDA

GO:0040020 "regulation of meiosis" evidence=IMP

GO:0048229 "gametophyte development" evidence=IMP

GO:0005829 "cytosol" evidence=IDA

GO:0004693 "cyclin-dependent protein serine/threonine kinase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=IDA

GO:0000278 "mitotic cell cycle" evidence=RCA

GO:0006995 "cellular response to nitrogen starvation" evidence=RCA

GO:0010048 "vernalization response" evidence=RCA

GO:0010440 "stomatal lineage progression" evidence=RCA

GO:0045736 "negative regulation of cyclin-dependent protein serine/threonine kinase activity" evidence=RCA

GO:0008356 "asymmetric cell division" evidence=IGI

GO:0000910 "cytokinesis" evidence=IMP

GO:0009409 "response to cold" evidence=IEP

GO:0009574 "preprophase band" evidence=TAS

GO:0010005 "cortical microtubule, transverse to long axis" evidence=IDA

TAIR|locus:2064087 CDKB1;2 "cyclin-dependent kinase B1;2" [Arabidopsis thaliana (taxid:3702)]

 Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
 Identities = 45/118 (38%), Positives = 77/118 (65%)

Query:    18 LVFEYVNINLHKFIQQYH------PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNL 71
             LVFEY++ +L KFI  +       P+++ L+++F++ +  G+++CH+  ++HRDL   NL
Sbjct:    91 LVFEYLDTDLKKFIDSHRKGSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNL 150

Query:    72 LADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             L D +   +KIA D G+++    P  A+T E+V L YRAP++L G T+   A+D+W+V
Sbjct:   151 LLDKDKGILKIA-DLGLSRAFTVPLKAYTHEIVTLWYRAPEVLLGSTHYSTAVDIWSV 207

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0051726 "regulation of cell cycle" evidence=TAS

GO:0000307 "cyclin-dependent protein kinase holoenzyme complex" evidence=ISS

GO:0030332 "cyclin binding" evidence=IPI

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|P29618 CDKA-1 "Cyclin-dependent kinase A-1" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
 Identities = 50/118 (42%), Positives = 71/118 (60%)

Query:    14 KRENLVFEYVNINLHKFIQQYHPMDSH--LIKKFLYCILSGISYCHARKIIHRDLTTMNL 71
             KR  LVFEY++++L KF+        +  LIK +LY IL G++YCH+ +++HRDL   NL
Sbjct:    74 KRIYLVFEYLDLDLKKFMDSCPEFAKNPTLIKSYLYQILRGVAYCHSHRVLHRDLKPQNL 133

Query:    72 LADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             L D     +K+A D G+A+    P    T E+V L YRAP+IL G       +DMW+V
Sbjct:   134 LIDRRTNALKLA-DFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRQYSTPVDMWSV 190

GO:0005515 "protein binding" evidence=IPI

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.7.11	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	135
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	3e-32
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	1e-29
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	3e-28
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	5e-28
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	1e-26
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	1e-24
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	1e-24
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	3e-24
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	5e-24
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	4e-23
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	3e-22
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	3e-22
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	8e-22
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	1e-21
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	4e-21
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	4e-21
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	5e-21
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	5e-21
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	8e-21
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	1e-20
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	5e-20
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	6e-20
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	1e-19
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	1e-19
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	2e-19
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	2e-19
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	3e-19
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	5e-18
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	2e-17
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	2e-17
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	2e-16
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	2e-16
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	1e-15
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	1e-15
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	5e-15
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	5e-15
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	7e-15
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	2e-14
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	2e-14
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	3e-14
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	6e-14
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	2e-13
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	1e-12
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	1e-12
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	3e-12
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	8e-12
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	9e-12
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	1e-11
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	2e-11
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	3e-11
cd07867	317	cd07867, STKc_CDC2L6, Catalytic domain of Serine/T	3e-11
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	7e-11
cd07868	317	cd07868, STKc_CDK8, Catalytic domain of the Serine	7e-11
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	1e-10
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	1e-10
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	2e-10
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	2e-10
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	3e-10
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	7e-10
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	8e-10
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	1e-09
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	2e-09
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	7e-09
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	9e-09
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	1e-08
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	1e-08
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	2e-08
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	3e-08
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	3e-08
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	4e-08
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	6e-08
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	1e-07
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	1e-07
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	1e-07
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	1e-07
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	2e-07
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	2e-07
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	3e-07
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	4e-07
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	6e-07
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	8e-07
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	1e-06
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	1e-06
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	2e-06
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	3e-06
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	3e-06
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	4e-06
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	5e-06
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	7e-06
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	7e-06
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	1e-05
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	1e-05
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	2e-05
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	2e-05
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	2e-05
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	2e-05
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	4e-05
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	4e-05
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	4e-05
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	4e-05
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	5e-05
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	5e-05
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	5e-05
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	6e-05
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	6e-05
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	7e-05
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	8e-05
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	8e-05
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	9e-05
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	9e-05
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	9e-05
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	1e-04
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	1e-04
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	1e-04
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	1e-04
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	2e-04
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	2e-04
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	2e-04
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	2e-04
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	2e-04
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	2e-04
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	3e-04
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	3e-04
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	3e-04
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	3e-04
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	3e-04
cd05107	401	cd05107, PTKc_PDGFR_beta, Catalytic domain of the	4e-04
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	4e-04
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	4e-04
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	5e-04
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	7e-04
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	7e-04
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	8e-04
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	8e-04
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	9e-04
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	0.001
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	0.001
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	0.001
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	0.001
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	0.001
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	0.001
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	0.001
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	0.001
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	0.001
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	0.001
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	0.002
cd05105	400	cd05105, PTKc_PDGFR_alpha, Catalytic domain of the	0.002
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	0.002
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	0.002
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	0.002
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	0.002
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	0.002
cd05043	280	cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece	0.002
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	0.002
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	0.003
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	0.003
PHA03210	501	PHA03210, PHA03210, serine/threonine kinase US3; P	0.003
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	0.003
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	0.003
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	0.003
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	0.003
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	0.003
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	0.003
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	0.004
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	0.004
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	0.004

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score =  114 bits (288), Expect = 3e-32
 Identities = 45/113 (39%), Positives = 74/113 (65%), Gaps = 3/113 (2%)

Query: 18  LVFEYVNINLHKFIQQYH-PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           LVFEY +++L K++ +   P+  +LIK  +Y +L G++YCH+ +I+HRDL   N+L +  
Sbjct: 75  LVFEYCDMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILIN-R 133

Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           +  +K+ AD G+A+    P   +T E+V L YRAP+IL G  +   A+D+W+V
Sbjct: 134 DGVLKL-ADFGLARAFGIPLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSV 185

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score =  107 bits (270), Expect = 1e-29
 Identities = 46/114 (40%), Positives = 72/114 (63%), Gaps = 4/114 (3%)

Query: 18  LVFEYVNINLHKFIQQ--YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           LVFE+++++L K++       +D  LIK +LY +L GI+YCH+ +++HRDL   NLL D 
Sbjct: 75  LVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDR 134

Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           E   +K+ AD G+A+    P   +T E+V L YRAP+IL G       +D+W++
Sbjct: 135 EG-ALKL-ADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSI 186

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score =  104 bits (261), Expect = 3e-28
 Identities = 49/118 (41%), Positives = 71/118 (60%), Gaps = 3/118 (2%)

Query: 14  KRENLVFEYVNINLHKFIQQYHPM--DSHLIKKFLYCILSGISYCHARKIIHRDLTTMNL 71
           KR  LVFEY++++L K +        +  LIK +LY IL GI+YCH+ +++HRDL   NL
Sbjct: 74  KRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNL 133

Query: 72  LADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           L D     +K+ AD G+A+    P    T E+V L YRAP+IL G  +    +D+W+V
Sbjct: 134 LIDRRTNALKL-ADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSV 190

Length = 294

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score =  104 bits (260), Expect = 5e-28
 Identities = 45/117 (38%), Positives = 71/117 (60%), Gaps = 6/117 (5%)

Query: 18  LVFEYVNINLHKFIQQY-----HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLL 72
           LVFEY++ +L KF+         P+ +  IK F+Y +L G+++CH   ++HRDL   NLL
Sbjct: 83  LVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLL 142

Query: 73  ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            D +   +KI AD G+ +    P  ++T E+V L YRAP++L G T+    +D+W+V
Sbjct: 143 VDKQKGLLKI-ADLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSV 198

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score =  100 bits (250), Expect = 1e-26
 Identities = 44/115 (38%), Positives = 72/115 (62%), Gaps = 5/115 (4%)

Query: 18  LVFEYVNINLHKFIQQYHP---MDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
           L+FE+++++L K++        MD+ L+K +LY IL GI +CH+R+++HRDL   NLL D
Sbjct: 76  LIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLID 135

Query: 75  IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
                +K+ AD G+A+    P   +T E+V L YRAP++L G       +D+W++
Sbjct: 136 -NKGVIKL-ADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSI 188

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 94.8 bits (236), Expect = 1e-24
 Identities = 43/122 (35%), Positives = 72/122 (59%), Gaps = 7/122 (5%)

Query: 12  VHKRE--NLVFEYVNINLHKFIQQYHP--MDSHLIKKFLYCILSGISYCHARKIIHRDLT 67
           +H ++   LVFEY++ +L +++       +  H ++ FL+ +L G++YCH R+++HRDL 
Sbjct: 72  IHTKKTLTLVFEYLDTDLKQYMDD-CGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLK 130

Query: 68  TMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMW 127
             NLL   E   +K+ AD G+A+    P   ++ E+V L YR P +L G T    ++DMW
Sbjct: 131 PQNLLIS-ERGELKL-ADFGLARAKSVPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMW 188

Query: 128 AV 129
            V
Sbjct: 189 GV 190

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 94.7 bits (236), Expect = 1e-24
 Identities = 41/113 (36%), Positives = 68/113 (60%), Gaps = 3/113 (2%)

Query: 18  LVFEYVNINLHKFIQQYH-PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           LVFE+++ +L+K I+     +   LIK +LY +L G+++CH+  I+HRDL   NLL +  
Sbjct: 75  LVFEFMDTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLIN-T 133

Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
              +K+ AD G+A+   +P   +T  +V   YRAP++L G       +D+W+V
Sbjct: 134 EGVLKL-ADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSV 185

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 94.1 bits (234), Expect = 3e-24
 Identities = 42/114 (36%), Positives = 70/114 (61%), Gaps = 4/114 (3%)

Query: 18  LVFEYVNINLHKFIQQYHP--MDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           LVFE+++ +L KF+       +   LIK +L+ +L G+++CH+ +++HRDL   NLL + 
Sbjct: 76  LVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLIN- 134

Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
               +K+ AD G+A+    P   +T E+V L YRAP+IL G      A+D+W++
Sbjct: 135 TEGAIKL-ADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSL 187

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 93.2 bits (232), Expect = 5e-24
 Identities = 40/115 (34%), Positives = 66/115 (57%), Gaps = 6/115 (5%)

Query: 18  LVFEYVNINLHKFIQQYHP--MDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           LVFEYV   L + ++   P  +    ++ +++ +L  I+YCH+  IIHRD+   N+L   
Sbjct: 77  LVFEYVERTLLELLEAS-PGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVS- 134

Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
           E+  +K+  D G A+ + A   +  T+ V  R YRAP++L G TN    +D+WA+
Sbjct: 135 ESGVLKL-CDFGFARALRARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAI 188

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 90.6 bits (225), Expect = 4e-23
 Identities = 42/116 (36%), Positives = 71/116 (61%), Gaps = 3/116 (2%)

Query: 14  KRENLVFEYVNINLHKFIQQYH-PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLL 72
           K+  LVFEY + +L K+    +  +D  ++K F++ +L G+++CH+  ++HRDL   NLL
Sbjct: 72  KKLTLVFEYCDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLL 131

Query: 73  ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWA 128
            + +N  +K+ AD G+A+    P   ++ E+V L YR P +LFG      +IDMW+
Sbjct: 132 IN-KNGELKL-ADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWS 185

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 88.9 bits (220), Expect = 3e-22
 Identities = 47/113 (41%), Positives = 69/113 (61%), Gaps = 3/113 (2%)

Query: 18  LVFEYVNINLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           LVFEY++ +L +++    + M  H +K F++ +L G+SYCH RKI+HRDL   NLL + E
Sbjct: 80  LVFEYLDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLIN-E 138

Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
              +K+ AD G+A+    P   ++ E+V L YR P +L G T     IDMW V
Sbjct: 139 KGELKL-ADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGV 190

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 88.9 bits (220), Expect = 3e-22
 Identities = 48/117 (41%), Positives = 70/117 (59%), Gaps = 3/117 (2%)

Query: 14  KRENLVFEYVNINLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLL 72
           K   LVFEY++ +L +++    + M  H +K FLY IL G++YCH RK++HRDL   NLL
Sbjct: 77  KSLTLVFEYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLL 136

Query: 73  ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            + E   +K+ AD G+A+    P   ++ E+V L YR P +L G +     IDMW V
Sbjct: 137 IN-ERGELKL-ADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGV 191

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 86.9 bits (216), Expect = 8e-22
 Identities = 41/113 (36%), Positives = 60/113 (53%), Gaps = 3/113 (2%)

Query: 18  LVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           LV EY    +L  ++ +  P+     KK    IL G+ Y H+  IIHRDL   N+L D E
Sbjct: 75  LVMEYCEGGDLFDYLSRGGPLSEDEAKKIALQILRGLEYLHSNGIIHRDLKPENILLD-E 133

Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           N  VKI AD G+AK++     + TT +    Y AP++L G       +D+W++
Sbjct: 134 NGVVKI-ADFGLAKKLLKSSSSLTTFVGTPWYMAPEVLLGGNGYGPKVDVWSL 185

Length = 260

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 87.4 bits (216), Expect = 1e-21
 Identities = 47/117 (40%), Positives = 72/117 (61%), Gaps = 3/117 (2%)

Query: 14  KRENLVFEYVNINLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLL 72
           K   LVFEY++ +L +++    + ++ H +K FL+ +L G++YCH RK++HRDL   NLL
Sbjct: 77  KSLTLVFEYLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLL 136

Query: 73  ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            + E   +K+ AD G+A+    P   ++ E+V L YR P IL G T+    IDMW V
Sbjct: 137 IN-ERGELKL-ADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGV 191

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 86.2 bits (214), Expect = 4e-21
 Identities = 43/116 (37%), Positives = 63/116 (54%), Gaps = 6/116 (5%)

Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           +V + +  +LH  I    P+    I+ FLY +L G+ Y H+  +IHRDL   NLL + E+
Sbjct: 85  VVMDLMESDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVN-ED 143

Query: 78  KTVKIAADSGMAKEIDAPFDAHT---TEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
             ++I  D GMA+ + +    H    TE V  R YRAP++L        AIDMW+V
Sbjct: 144 CELRI-GDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSV 198

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 84.2 bits (209), Expect = 4e-21
 Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 6/123 (4%)

Query: 18  LVFEYVNI-NLHKFIQQYH-PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           LV EY    +L   +++    +    I + L  IL G+ Y H+  IIHRDL   N+L D 
Sbjct: 68  LVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDS 127

Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWA---VLYL 132
           +N  VK+ AD G++K + +      T +    Y AP++L G+       D+W+   +LY 
Sbjct: 128 DNGKVKL-ADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYE 186

Query: 133 LRW 135
           L  
Sbjct: 187 LPE 189

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 84.9 bits (211), Expect = 5e-21
 Identities = 37/114 (32%), Positives = 64/114 (56%), Gaps = 7/114 (6%)

Query: 18  LVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           LV EY    +L   +++   +     + +L  ILS + Y H++ I+HRDL   N+L D E
Sbjct: 74  LVMEYCEGGDLFDLLKKRGRLSEDEARFYLRQILSALEYLHSKGIVHRDLKPENILLD-E 132

Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRT-NCFAAIDMWAV 129
           +  VK+ AD G+A+++D   +  TT +    Y AP++L G+      A+D+W++
Sbjct: 133 DGHVKL-ADFGLARQLDPG-EKLTTFVGTPEYMAPEVLLGKGYGK--AVDIWSL 182

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 85.2 bits (211), Expect = 5e-21
 Identities = 42/115 (36%), Positives = 70/115 (60%), Gaps = 5/115 (4%)

Query: 18  LVFEYVNINLHKFIQQY---HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
           LVFEY++ +L K++  +     +D + +K F Y +L GI++CH  +++HRDL   NLL +
Sbjct: 75  LVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLIN 134

Query: 75  IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
              + +K+ AD G+A+    P +  + E+V L YRAP +L G      +ID+W+V
Sbjct: 135 KRGE-LKL-ADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSV 187

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 84.5 bits (210), Expect = 8e-21
 Identities = 50/135 (37%), Positives = 74/135 (54%), Gaps = 21/135 (15%)

Query: 15  REN----LVFEYVNINLHKFI--QQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTT 68
           REN     VFEY+  NL++ +  ++  P    +I+  +Y IL G+++ H     HRDL  
Sbjct: 68  RENDELYFVFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKP 127

Query: 69  MNLLADIENKTVKIAADSGMAKEIDA--PFDAHTTEMVILR-YRAPKILFGRTNCFAAID 125
            NLL     + VKI AD G+A+EI +  P+    T+ V  R YRAP+IL   T+  + +D
Sbjct: 128 ENLLVS-GPEVVKI-ADFGLAREIRSRPPY----TDYVSTRWYRAPEILLRSTSYSSPVD 181

Query: 126 MWAV------LYLLR 134
           +WA+      LY LR
Sbjct: 182 IWALGCIMAELYTLR 196

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 84.5 bits (210), Expect = 1e-20
 Identities = 45/115 (39%), Positives = 66/115 (57%), Gaps = 5/115 (4%)

Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           +V E +  +LHK I+   P+    I+ FLY IL G+ Y H+  +IHRDL   N+L +  N
Sbjct: 81  IVTELMETDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVN-SN 139

Query: 78  KTVKIAADSGMAKEIDAPFDA--HTTEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+ +D   D     TE V+ R YRAP++L   +    AID+W+V
Sbjct: 140 CDLKI-CDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSV 193

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 82.4 bits (204), Expect = 5e-20
 Identities = 44/117 (37%), Positives = 72/117 (61%), Gaps = 3/117 (2%)

Query: 14  KRENLVFEYVNINLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLL 72
           KR  LVFE+V+  +   +++Y + +D   ++K+L+ IL GI +CH+  IIHRD+   N+L
Sbjct: 73  KRLYLVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENIL 132

Query: 73  ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
              ++  VK+  D G A+ + AP + +T  +    YRAP++L G T    A+D+WAV
Sbjct: 133 VS-QSGVVKL-CDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAV 187

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 82.2 bits (204), Expect = 6e-20
 Identities = 40/116 (34%), Positives = 63/116 (54%), Gaps = 8/116 (6%)

Query: 18  LVFEYVNINLHKFIQ--QYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           +VFEY++ +L   +   +    +S  IK ++  +L G+ Y H+  I+HRD+   N+L  I
Sbjct: 77  MVFEYMDHDLTGLLDSPEVKFTESQ-IKCYMKQLLEGLQYLHSNGILHRDIKGSNIL--I 133

Query: 76  ENK-TVKIAADSGMAKEIDAPFDAHTTEMVI-LRYRAPKILFGRTNCFAAIDMWAV 129
            N   +K+ AD G+A+       A  T  VI L YR P++L G T     +DMW+V
Sbjct: 134 NNDGVLKL-ADFGLARPYTKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSV 188

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 81.6 bits (202), Expect = 1e-19
 Identities = 38/114 (33%), Positives = 61/114 (53%), Gaps = 4/114 (3%)

Query: 18  LVFEYVNINLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           LV EY+  +L + ++    P+    +K ++  +L G++Y HA  I+HRDL   NLL    
Sbjct: 76  LVMEYMPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLIS-A 134

Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
           +  +KI AD G+A+          +  V  R YRAP++L+G       +D+WAV
Sbjct: 135 DGVLKI-ADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAV 187

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 81.9 bits (203), Expect = 1e-19
 Identities = 47/139 (33%), Positives = 75/139 (53%), Gaps = 15/139 (10%)

Query: 1   MQEM-----MKSMSLWVHKRE-NLVFEYVNINLHKFIQQ----YHPMDSHLIKKFLYCIL 50
           +QE+     +  + ++ HK   NLVFE++  +L K I+       P D   IK ++   L
Sbjct: 56  LQELKHPNIIGLLDVFGHKSNINLVFEFMETDLEKVIKDKSIVLTPAD---IKSYMLMTL 112

Query: 51  SGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRA 110
            G+ Y H+  I+HRDL   NLL    +  +K+ AD G+A+   +P    T ++V   YRA
Sbjct: 113 RGLEYLHSNWILHRDLKPNNLLIA-SDGVLKL-ADFGLARSFGSPNRKMTHQVVTRWYRA 170

Query: 111 PKILFGRTNCFAAIDMWAV 129
           P++LFG  +    +DMW+V
Sbjct: 171 PELLFGARHYGVGVDMWSV 189

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 81.7 bits (201), Expect = 2e-19
 Identities = 48/122 (39%), Positives = 71/122 (58%), Gaps = 7/122 (5%)

Query: 12  VHKRENL--VFEYVNINLHKFIQQYHPMDSHL--IKKFLYCILSGISYCHARKIIHRDLT 67
           +H +E L  VFEYV+ +L +++ + HP   H   +K FL+ +L G+SY H R I+HRDL 
Sbjct: 72  IHTKETLTLVFEYVHTDLCQYMDK-HPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLK 130

Query: 68  TMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMW 127
             NLL   +   +K+A D G+A+    P   ++ E+V L YR P +L G T     +DMW
Sbjct: 131 PQNLLIS-DTGELKLA-DFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMW 188

Query: 128 AV 129
            V
Sbjct: 189 GV 190

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 81.1 bits (201), Expect = 2e-19
 Identities = 35/88 (39%), Positives = 53/88 (60%), Gaps = 2/88 (2%)

Query: 42  IKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTT 101
           +K  +  +LSG+++ H   I+HRDL T NLL  + N+ +    D G+A+E  +P   +T 
Sbjct: 108 VKCLMLQLLSGVAHLHDNWILHRDLKTSNLL--LNNRGILKICDFGLAREYGSPLKPYTQ 165

Query: 102 EMVILRYRAPKILFGRTNCFAAIDMWAV 129
            +V L YRAP++L G      AIDMW+V
Sbjct: 166 LVVTLWYRAPELLLGAKEYSTAIDMWSV 193

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 80.8 bits (199), Expect = 3e-19
 Identities = 42/121 (34%), Positives = 75/121 (61%), Gaps = 7/121 (5%)

Query: 12  VHKRENL--VFEYVNINLHKFIQQYHP--MDSHLIKKFLYCILSGISYCHARKIIHRDLT 67
           +H +E L  VFEY++ +L +++ Q HP  +  + ++ F++ +L G++Y H + I+HRDL 
Sbjct: 72  IHTKETLTFVFEYMHTDLAQYMIQ-HPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLK 130

Query: 68  TMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMW 127
             NLL     + +K+ AD G+A+    P   +++E+V L YR P +L G T+  +A+D+W
Sbjct: 131 PQNLLISYLGE-LKL-ADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIW 188

Query: 128 A 128
            
Sbjct: 189 G 189

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 77.3 bits (191), Expect = 5e-18
 Identities = 41/127 (32%), Positives = 68/127 (53%), Gaps = 14/127 (11%)

Query: 17  NLVFEYVNINLHKFIQQYHP--MDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
            LVFE+V+ +L  ++ +     +    IK  +  +L G+ + H+ +I+HRDL   N+L  
Sbjct: 82  TLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVT 141

Query: 75  IENKTVKIAADSGMAKEIDAPFD-AHTTEMVILRYRAPKILFGRTNCFAAIDMWAV---- 129
            +   VKI AD G+A+     F+ A T+ +V L YRAP++L   +     +DMW+V    
Sbjct: 142 SD-GQVKI-ADFGLARIYS--FEMALTSVVVTLWYRAPEVLLQSSYAT-PVDMWSVGCIF 196

Query: 130 --LYLLR 134
             L+  R
Sbjct: 197 AELFRRR 203

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 75.9 bits (187), Expect = 2e-17
 Identities = 39/118 (33%), Positives = 67/118 (56%), Gaps = 5/118 (4%)

Query: 14  KRENLVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLL 72
           ++ +LVFEY +   L++  +    +  HLIKK ++  L  +++CH    IHRD+   N+L
Sbjct: 73  RKLHLVFEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENIL 132

Query: 73  ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
              + + +K+  D G A+ +  P D + T+ V  R YRAP++L G T     +D+WA+
Sbjct: 133 ITKQGQ-IKL-CDFGFARILTGPGDDY-TDYVATRWYRAPELLVGDTQYGPPVDVWAI 187

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 76.1 bits (188), Expect = 2e-17
 Identities = 48/129 (37%), Positives = 71/129 (55%), Gaps = 15/129 (11%)

Query: 12  VHKREN-----LVFEYVNINLHKFIQQYHPMDSHLIKKF-LYCILSGISYCHARKIIHRD 65
           V K EN     LVFEY+  +LH  I+     D H  K++ +Y +L  + Y H+  +IHRD
Sbjct: 75  VIKAENDKDIYLVFEYMETDLHAVIRANILEDVH--KRYIMYQLLKALKYIHSGNVIHRD 132

Query: 66  LTTMNLLADIENKTVKIAADSGMAKEI----DAPFDAHTTEMVILR-YRAPKILFGRTNC 120
           L   N+L + +   VK+A D G+A+ +    + P +   T+ V  R YRAP+IL G T  
Sbjct: 133 LKPSNILLNSDC-RVKLA-DFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRY 190

Query: 121 FAAIDMWAV 129
              +DMW+V
Sbjct: 191 TKGVDMWSV 199

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 73.6 bits (181), Expect = 2e-16
 Identities = 44/113 (38%), Positives = 58/113 (51%), Gaps = 3/113 (2%)

Query: 18  LVFEYVNINLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           LV EY   +L   +     P     +K  +  +L G+ Y H   IIHRDL   NLL   +
Sbjct: 85  LVMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLT-D 143

Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
              +KIA D G+A+    P    T ++V L YRAP++L G T    AIDMWAV
Sbjct: 144 KGCLKIA-DFGLARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAV 195

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 73.6 bits (181), Expect = 2e-16
 Identities = 43/105 (40%), Positives = 62/105 (59%), Gaps = 3/105 (2%)

Query: 26  NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAAD 85
           +LHK I    P+ S  +K FLY IL G+ Y H+  I+HRD+   NLL +  N  +KI  D
Sbjct: 89  DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVN-SNCVLKI-CD 146

Query: 86  SGMAKEIDAPFDAH-TTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            G+A+  +     H T E+V   YRAP+IL G  +  +A+D+W+V
Sbjct: 147 FGLARVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSV 191

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 71.6 bits (176), Expect = 1e-15
 Identities = 38/112 (33%), Positives = 62/112 (55%), Gaps = 2/112 (1%)

Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           +V+E ++ +LH+ I+    +     + FLY +L G+ Y H+  ++HRDL   NLL +  N
Sbjct: 86  IVYELMDTDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLN-AN 144

Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+      D  T  +V   YRAP++L   +    AID+W+V
Sbjct: 145 CDLKI-CDFGLARTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSV 195

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 71.3 bits (175), Expect = 1e-15
 Identities = 43/116 (37%), Positives = 63/116 (54%), Gaps = 12/116 (10%)

Query: 21  EYVNINLHKFIQQYHPM-DSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLL--ADIEN 77
           E +  +LH+ I+   P+ D+H  + F+Y IL G+ Y H+  ++HRDL   NLL  AD E 
Sbjct: 86  ELMEADLHQIIRSGQPLTDAH-FQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCE- 143

Query: 78  KTVKIAADSGMAKEIDAPF---DAHTTEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+             TE V  R YRAP+I+    +   AID+W+V
Sbjct: 144 --LKI-CDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSV 196

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 69.8 bits (171), Expect = 5e-15
 Identities = 37/114 (32%), Positives = 64/114 (56%), Gaps = 5/114 (4%)

Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           +V EY+  +L   ++Q  P+     + F+Y +L G+ Y H+  ++HRDL   N+  + E+
Sbjct: 93  IVQEYMETDLANVLEQ-GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTED 151

Query: 78  KTVKIAADSGMAKEIDAPFD--AHTTE-MVILRYRAPKILFGRTNCFAAIDMWA 128
             +KI  D G+A+ +D  +    + +E +V   YR+P++L    N   AIDMWA
Sbjct: 152 LVLKI-GDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWA 204

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 69.2 bits (170), Expect = 5e-15
 Identities = 40/133 (30%), Positives = 68/133 (51%), Gaps = 18/133 (13%)

Query: 8   MSLWVHKRENLVFEYVNINLHKFIQQY-----HPMDSHLIKKFLYCILSGISYCHARKII 62
            S++      L+F+Y   +L + I+ +       +   ++K  L+ IL+G+ Y H+  ++
Sbjct: 77  KSVY------LLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVL 130

Query: 63  HRDLTTMNLLADIENK---TVKIAADSGMAKEIDAPFDAHTTE---MVILRYRAPKILFG 116
           HRDL   N+L   E      VKI  D G+A+  +AP          +V + YRAP++L G
Sbjct: 131 HRDLKPANILVMGEGPERGVVKI-GDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLG 189

Query: 117 RTNCFAAIDMWAV 129
             +   AID+WA+
Sbjct: 190 ARHYTKAIDIWAI 202

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 68.9 bits (169), Expect = 7e-15
 Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 13/99 (13%)

Query: 42  IKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEID-------- 93
           IK ++  +L GI+Y H   I+HRD+   N+L D     +KI AD G+A+  D        
Sbjct: 117 IKCYMLQLLEGINYLHENHILHRDIKAANILID-NQGILKI-ADFGLARPYDGPPPNPKG 174

Query: 94  --APFDAHTTEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
                    T +V+ R YR P++L G      A+D+W +
Sbjct: 175 GGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGI 213

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 67.6 bits (166), Expect = 2e-14
 Identities = 35/116 (30%), Positives = 62/116 (53%), Gaps = 6/116 (5%)

Query: 17  NLVFEYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           N+  EYV+  +L   ++++  +   +I+K+   IL G++Y H+  I+HRD+   N+L D 
Sbjct: 77  NIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVD- 135

Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVI--LRYRAPKILFGRTNCFAAIDMWAV 129
            +  VK+ AD G AK +        T  V     + AP+++ G     AA D+W++
Sbjct: 136 SDGVVKL-ADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAA-DIWSL 189

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 67.7 bits (166), Expect = 2e-14
 Identities = 47/116 (40%), Positives = 66/116 (56%), Gaps = 8/116 (6%)

Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           +V E +  +L+K I+  H  + H I+ FLY IL G+ Y H+  ++HRDL   NLL +  N
Sbjct: 85  IVQELMETDLYKLIKTQHLSNDH-IQYFLYQILRGLKYIHSANVLHRDLKPSNLLLN-TN 142

Query: 78  KTVKIAADSGMAKEIDAPFDAHT---TEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+ I  P   HT   TE V  R YRAP+I+        AID+W+V
Sbjct: 143 CDLKI-CDFGLAR-IADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSV 196

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 66.9 bits (163), Expect = 3e-14
 Identities = 39/115 (33%), Positives = 63/115 (54%), Gaps = 7/115 (6%)

Query: 18  LVFEYVNINLHKFIQQYHPMDS--HLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           LVFEYV  N+ + +++  P       ++ ++Y ++  I +CH   I+HRD+   NLL  I
Sbjct: 77  LVFEYVEKNMLELLEE-MPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLL--I 133

Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
            +  V    D G A+ +    +A+ TE V  R YR+P++L G      A+DMW+V
Sbjct: 134 SHNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAPYG-KAVDMWSV 187

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 67.0 bits (163), Expect = 6e-14
 Identities = 39/118 (33%), Positives = 65/118 (55%), Gaps = 8/118 (6%)

Query: 17  NLVFEYVNINLHKFIQQY----HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLL 72
           N+V E++   +HK+++ Y    H +   L+K + Y +   ++Y H++ I HRDL   NLL
Sbjct: 143 NVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLL 202

Query: 73  ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
            D    T+K+  D G AK + A     +   +  R YRAP+++ G TN    ID+W++
Sbjct: 203 IDPNTHTLKL-CDFGSAKNLLA--GQRSVSYICSRFYRAPELMLGATNYTTHIDLWSL 257

Length = 440

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 65.1 bits (159), Expect = 2e-13
 Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 7/117 (5%)

Query: 18  LVFEYVNINLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           LVFE+   +L   +           IKK +  +L+G+ Y H  KI+HRD+   N+L   +
Sbjct: 96  LVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILIT-K 154

Query: 77  NKTVKIAADSGMAKEIDAPFDA----HTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           +  +K+ AD G+A+      ++    +T  +V L YR P++L G  +    IDMW  
Sbjct: 155 DGILKL-ADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGA 210

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 62.9 bits (153), Expect = 1e-12
 Identities = 38/112 (33%), Positives = 59/112 (52%), Gaps = 8/112 (7%)

Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
            V E +  +LH+ +    P++   I+ FLY IL G+ Y H+  ++HRDL   N+L + EN
Sbjct: 87  FVTELLGTDLHRLLTS-RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILIN-EN 144

Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILR-YRAPKILFGRTNCFAAIDMWA 128
             +KI  D G+A+      D   T  V  R YRAP+I+         +D+W+
Sbjct: 145 CDLKI-CDFGLAR----IQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWS 191

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 62.8 bits (151), Expect = 1e-12
 Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 13/129 (10%)

Query: 13  HKRENLVFEYV-NINLHKFIQQYH---PMDSHLIKKFLYCILSGISYCHARKIIHRDLTT 68
                LV EYV   +L   +++     P+        L  ILS + Y H++ IIHRD+  
Sbjct: 70  EGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKP 129

Query: 69  MNLLADIENKTVKIAADSGMAKEIDAPFDA------HTTEMVILRYRAPKILFGRTNCFA 122
            N+L D + + VK+  D G+AK +  P          +T +    Y AP++L G +  +A
Sbjct: 130 ENILLDRDGRVVKL-IDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYA 188

Query: 123 --AIDMWAV 129
             + D+W++
Sbjct: 189 SSSSDIWSL 197

Length = 384

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 61.7 bits (150), Expect = 3e-12
 Identities = 37/127 (29%), Positives = 62/127 (48%), Gaps = 16/127 (12%)

Query: 17  NLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           NLV + +  +L K + +   +    +K  L  IL+G++  H    +HRDL+  N+   I 
Sbjct: 96  NLVMDIMASDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIF--IN 153

Query: 77  NKTVKIAADSGMAK--------------EIDAPFDAHTTEMVILRYRAPKILFGRTNCFA 122
           +K +   AD G+A+              E     +  T+++V L YRAP++L G      
Sbjct: 154 SKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHF 213

Query: 123 AIDMWAV 129
           A+DMW+V
Sbjct: 214 AVDMWSV 220

Length = 335

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 60.1 bits (146), Expect = 8e-12
 Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 18/121 (14%)

Query: 17  NLVFEYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
            +  E V   +L K +++Y      +I+ +   IL G+ Y H R  +HRD+   N+L D 
Sbjct: 78  YIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVD- 136

Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILR-------YRAPKILFGRTNCFAAIDMWA 128
            N  VK+ AD GMAK           E    +       + AP+++  +     A D+W+
Sbjct: 137 TNGVVKL-ADFGMAK--------QVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWS 187

Query: 129 V 129
           +
Sbjct: 188 L 188

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 59.9 bits (146), Expect = 9e-12
 Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 5/79 (6%)

Query: 18  LVFEYV-NINLHKFIQQYHPMDSHLIKKFLYC--ILSGISYCHARKIIHRDLTTMNLLAD 74
           +V EY+   +L  ++++  P +  L     +   I  G+ Y  ++  IHRDL   N L  
Sbjct: 78  IVMEYMPGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVG 137

Query: 75  IENKTVKIAADSGMAKEID 93
            EN  VKI +D G+++++ 
Sbjct: 138 -ENLVVKI-SDFGLSRDLY 154

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 59.6 bits (145), Expect = 1e-11
 Identities = 39/123 (31%), Positives = 68/123 (55%), Gaps = 15/123 (12%)

Query: 13  HKRENLVFEYVNINLHKFIQ-QYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNL 71
             R  LVFE +++NL++ I+ +  P+    +K ++Y +L  + + H   I HRD+   N+
Sbjct: 72  TGRLALVFELMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENI 131

Query: 72  LADIENKTVKIAADSGMAKEIDA--PFDAHTTEMVILR-YRAPKILFGRTNCF--AAIDM 126
           L  I++  +K+ AD G  + I +  P+    TE +  R YRAP+ L   T+ +    +D+
Sbjct: 132 L--IKDDILKL-ADFGSCRGIYSKPPY----TEYISTRWYRAPECLL--TDGYYGPKMDI 182

Query: 127 WAV 129
           WAV
Sbjct: 183 WAV 185

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 59.2 bits (143), Expect = 2e-11
 Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 6/114 (5%)

Query: 18  LVFEYVNINLHKFIQQYHP--MDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           LVFE+V+ +L  ++ +  P  + +  IK  +   L G+ + HA  I+HRDL   N+L   
Sbjct: 84  LVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILV-T 142

Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
               VK+ AD G+A+ I +   A T  +V L YRAP++L   T     +DMW+V
Sbjct: 143 SGGQVKL-ADFGLAR-IYSCQMALTPVVVTLWYRAPEVLLQSTYA-TPVDMWSV 193

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 58.3 bits (142), Expect = 3e-11
 Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 5/101 (4%)

Query: 18  LVFEYV-NINLHKFIQQYHPMDSHLIK-KFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           +V EY+   +L  ++++  P  S      F   I  G+ Y  ++  IHRDL   N L   
Sbjct: 78  IVMEYMEGGDLLSYLRKNRPKLSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVG- 136

Query: 76  ENKTVKIAADSGMAKEI-DAPFDAHTTEMVILRYRAPKILF 115
           EN  VKI +D G+++++ D  +       + +R+ AP+ L 
Sbjct: 137 ENLVVKI-SDFGLSRDLYDDDYYRKRGGKLPIRWMAPESLK 176

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

 Score = 58.9 bits (142), Expect = 3e-11
 Identities = 44/127 (34%), Positives = 63/127 (49%), Gaps = 16/127 (12%)

Query: 18  LVFEYVNINLHKFIQQYH-------PMD--SHLIKKFLYCILSGISYCHARKIIHRDLTT 68
           L+F+Y   +L   I+ +        PM     ++K  LY IL GI Y HA  ++HRDL  
Sbjct: 77  LLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKP 136

Query: 69  MNLLA---DIENKTVKIAADSGMAKEIDAPFDAHTT---EMVILRYRAPKILFGRTNCFA 122
            N+L      E   VKI AD G A+  ++P          +V   YRAP++L G  +   
Sbjct: 137 ANILVMGEGPERGRVKI-ADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTK 195

Query: 123 AIDMWAV 129
           AID+WA+
Sbjct: 196 AIDIWAI 202

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 57.7 bits (139), Expect = 7e-11
 Identities = 35/115 (30%), Positives = 68/115 (59%), Gaps = 8/115 (6%)

Query: 18  LVFEYVNINLHKFIQQY-HP-MDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           LVFE+V+ +L  ++ +   P + +  IK  ++ +L G+ + H+ +++HRDL   N+L   
Sbjct: 86  LVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV-T 144

Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVI-LRYRAPKILFGRTNCFAAIDMWAV 129
            +  +K+ AD G+A+     F    T +V+ L YRAP++L  +++    +D+W+V
Sbjct: 145 SSGQIKL-ADFGLARIYS--FQMALTSVVVTLWYRAPEVLL-QSSYATPVDLWSV 195

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

 Score = 57.8 bits (139), Expect = 7e-11
 Identities = 42/127 (33%), Positives = 63/127 (49%), Gaps = 16/127 (12%)

Query: 18  LVFEYVNINLHKFIQQYHPMDSH---------LIKKFLYCILSGISYCHARKIIHRDLTT 68
           L+F+Y   +L   I+ +    ++         ++K  LY IL GI Y HA  ++HRDL  
Sbjct: 77  LLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKP 136

Query: 69  MNLLA---DIENKTVKIAADSGMAKEIDAPFDAHTT---EMVILRYRAPKILFGRTNCFA 122
            N+L      E   VKI AD G A+  ++P          +V   YRAP++L G  +   
Sbjct: 137 ANILVMGEGPERGRVKI-ADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTK 195

Query: 123 AIDMWAV 129
           AID+WA+
Sbjct: 196 AIDIWAI 202

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 57.5 bits (139), Expect = 1e-10
 Identities = 40/117 (34%), Positives = 64/117 (54%), Gaps = 12/117 (10%)

Query: 18  LVFEYVNINLHKFIQQ--YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           LVFEY++ +L   ++    H  + H IK F+  +L G++YCH +  +HRD+   N+L  +
Sbjct: 93  LVFEYMDHDLMGLLESGLVHFSEDH-IKSFMKQLLEGLNYCHKKNFLHRDIKCSNIL--L 149

Query: 76  ENKTVKIAADSGMA----KEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWA 128
            NK     AD G+A     E   P+   T +++ L YR P++L G      AID+W+
Sbjct: 150 NNKGQIKLADFGLARLYNSEESRPY---TNKVITLWYRPPELLLGEERYGPAIDVWS 203

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 57.3 bits (139), Expect = 1e-10
 Identities = 38/113 (33%), Positives = 58/113 (51%), Gaps = 8/113 (7%)

Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H I+  +Y IL G+ Y H+  IIHRDL   N +A  E+
Sbjct: 97  LVTHLMGADLNNIVKCQKLSDDH-IQFLVYQILRGLKYIHSAGIIHRDLKPSN-IAVNED 154

Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+      D   T  V  R YRAP+I+    +    +D+W+V
Sbjct: 155 CELKI-LDFGLARHT----DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 202

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 56.4 bits (137), Expect = 2e-10
 Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 4/78 (5%)

Query: 18  LVFEYV-NINLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           +V EY+   +L  F++++   +    + +    I  G+ Y  ++  +HRDL   N L   
Sbjct: 78  IVTEYMPGGDLLDFLRKHGEKLTLKDLLQMALQIAKGMEYLESKNFVHRDLAARNCLVT- 136

Query: 76  ENKTVKIAADSGMAKEID 93
           EN  VKI +D G++++I 
Sbjct: 137 ENLVVKI-SDFGLSRDIY 153

Length = 258

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 56.0 bits (136), Expect = 2e-10
 Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 14/113 (12%)

Query: 18  LVFEYV-NINLHKFIQQ-----YHPMDSHL----IKKFLYCILSGISYCHARKIIHRDLT 67
           LV EY+   +L  ++++       P  S L    +  F   I  G+ Y  ++K +HRDL 
Sbjct: 73  LVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLA 132

Query: 68  TMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTE--MVILRYRAPKILFGRT 118
             N L   E+  VKI +D G+++++             + +R+ AP+ L    
Sbjct: 133 ARNCLVG-EDLVVKI-SDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGI 183

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 56.3 bits (136), Expect = 3e-10
 Identities = 39/118 (33%), Positives = 62/118 (52%), Gaps = 10/118 (8%)

Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           +VFE +  +LH+ I+    +     + FLY +L  + Y H   + HRDL   N+LA+ + 
Sbjct: 81  VVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADC 140

Query: 78  KTVKIAADSGMAKEI--DAPFDAHTTEMVILR-YRAPKI---LFGRTNCFAAIDMWAV 129
           K +KI  D G+A+    D P     T+ V  R YRAP++    F +     AID+W++
Sbjct: 141 K-LKI-CDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYT--PAIDIWSI 194

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 54.9 bits (132), Expect = 7e-10
 Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 9/113 (7%)

Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV  Y+  +L K +   HP+    ++  +Y +L G+ Y H+  IIHRDL   NL  + E+
Sbjct: 97  LVMPYMQTDLQKIMG--HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVN-ED 153

Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+      DA  T  V+ R YRAP+++    +    +D+W+V
Sbjct: 154 CELKI-LDFGLARHA----DAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSV 201

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 54.4 bits (131), Expect = 8e-10
 Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 5/77 (6%)

Query: 17  NLVFEYV-NINLHKFIQQY--HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLA 73
           N+V EY  N +LHK ++     P+    + +F   IL G+++ H++KI+HRD+ ++NL  
Sbjct: 75  NIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFL 134

Query: 74  DIENKTVKIAADSGMAK 90
           D     VKI  D G+AK
Sbjct: 135 D-AYDNVKI-GDLGVAK 149

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 54.1 bits (130), Expect = 1e-09
 Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 5/80 (6%)

Query: 17  NLVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           N+  EYV   ++   +  Y   +  L++ F+  IL G++Y H R IIHRD+   N+L D 
Sbjct: 82  NIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVD- 140

Query: 76  ENK-TVKIAADSGMAKEIDA 94
            NK  +KI +D G++K+++A
Sbjct: 141 -NKGGIKI-SDFGISKKLEA 158

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 53.9 bits (130), Expect = 2e-09
 Identities = 43/122 (35%), Positives = 60/122 (49%), Gaps = 6/122 (4%)

Query: 15  RENLVF--EYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNL 71
           ++ L F  EYVN  +L   IQ+    D    + +   I+ G+ + H R II+RDL   N+
Sbjct: 68  KDRLFFVMEYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNV 127

Query: 72  LADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLY 131
           L D E   +KI AD GM KE        +T      Y AP+IL  +     A+D WA+  
Sbjct: 128 LLDSEGH-IKI-ADFGMCKEGILGGVTTSTFCGTPDYIAPEILSYQPYGP-AVDWWALGV 184

Query: 132 LL 133
           LL
Sbjct: 185 LL 186

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 51.9 bits (125), Expect = 7e-09
 Identities = 30/116 (25%), Positives = 62/116 (53%), Gaps = 8/116 (6%)

Query: 17  NLVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
            ++ EY  N +L + I+++ P    L+  ++Y +L G++Y H + +IHRD+   N+L   
Sbjct: 75  YIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTK 134

Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVI--LRYRAPKILFGRTNCFAAIDMWAV 129
           +   VK+ AD G+A +++    +     V+    + AP+++        A D+W++
Sbjct: 135 DG-VVKL-ADFGVATKLND--VSKDDASVVGTPYWMAPEVIEMS-GASTASDIWSL 185

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 51.7 bits (124), Expect = 9e-09
 Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 8/107 (7%)

Query: 27  LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADS 86
           +   ++ Y  +   + +K+   IL G+ Y H+  I+HRD+   N+L D     VK+  D 
Sbjct: 91  VKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRD-SAGNVKL-GDF 148

Query: 87  GMAKEIDAPFDAHTTEMVILR----YRAPKILFGRTNCFAAIDMWAV 129
           G +K +     +  T M  +     + +P+++ G      A D+W+V
Sbjct: 149 GASKRLQT-ICSSGTGMKSVTGTPYWMSPEVISGEGYGRKA-DVWSV 193

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 51.5 bits (123), Expect = 1e-08
 Identities = 36/113 (31%), Positives = 62/113 (54%), Gaps = 8/113 (7%)

Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV  ++  +L K + ++  +    I+  +Y +L G+ Y HA  IIHRDL   NL  + E+
Sbjct: 97  LVMPFMGTDLGK-LMKHEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVN-ED 154

Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A++     D+  T  V+ R YRAP+++    +    +D+W+V
Sbjct: 155 CELKI-LDFGLARQT----DSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSV 202

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 51.2 bits (122), Expect = 1e-08
 Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 12/115 (10%)

Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           +V E ++ NL + IQ    +D   +   LY +L GI + H+  IIHRDL   N++    +
Sbjct: 106 IVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK-SD 162

Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFG---RTNCFAAIDMWAV 129
            T+KI  D G+A+     F   T  +V   YRAP+++ G   + N    +D+W+V
Sbjct: 163 CTLKI-LDFGLARTAGTSF-MMTPYVVTRYYRAPEVILGMGYKEN----VDIWSV 211

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 50.4 bits (121), Expect = 2e-08
 Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 6/99 (6%)

Query: 31  IQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAK 90
           + Q        +K ++  I+  + Y H++ IIHRD+   N+L D E   V I  D  +A 
Sbjct: 91  LSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLD-EQGHVHI-TDFNIA- 147

Query: 91  EIDAPFDAHTTEMV-ILRYRAPKILFGRTNCFAAIDMWA 128
                 D  TT       Y AP++L  +     A+D W+
Sbjct: 148 -TKVTPDTLTTSTSGTPGYMAPEVLCRQGYSV-AVDWWS 184

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 50.4 bits (120), Expect = 3e-08
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 6/112 (5%)

Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 99  LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 156

Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+  D   D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 157 CELKI-LDFGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 204

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 50.5 bits (120), Expect = 3e-08
 Identities = 38/112 (33%), Positives = 59/112 (52%), Gaps = 6/112 (5%)

Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV E ++ NL + IQ    +D   +   LY +L GI + H+  IIHRDL   N++    +
Sbjct: 99  LVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK-SD 155

Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            T+KI  D G+A+     F   T  +V   YRAP+++ G       +D+W+V
Sbjct: 156 CTLKI-LDFGLARTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDIWSV 204

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 49.7 bits (119), Expect = 4e-08
 Identities = 40/116 (34%), Positives = 62/116 (53%), Gaps = 14/116 (12%)

Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV E ++ NL + IQ    +D   +   LY +L GI + H+  IIHRDL   N++    +
Sbjct: 98  LVMELMDANLCQVIQM--DLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK-SD 154

Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILR-YRAPKILFG---RTNCFAAIDMWAV 129
            T+KI  D G+A+     F    T  V+ R YRAP+++ G   + N    +D+W+V
Sbjct: 155 CTLKI-LDFGLARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKEN----VDIWSV 203

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 49.1 bits (118), Expect = 6e-08
 Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 6/114 (5%)

Query: 18  LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           LV EY     L   + +         + +   I+  + Y H+  II+RDL   N+L D  
Sbjct: 70  LVLEYAPGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLD-A 128

Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
           +  +K+  D G+AKE  +   + T        Y AP++L G+     A+D W++
Sbjct: 129 DGHIKL-TDFGLAKE-LSSEGSRTNTFCGTPEYLAPEVLLGKGYGK-AVDWWSL 179

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 48.7 bits (116), Expect = 1e-07
 Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 2/64 (3%)

Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRY 108
           ILSGI+Y H R I+HRD+   NLL +   K VKI AD G+++ +    D   + +  + Y
Sbjct: 177 ILSGIAYLHRRHIVHRDIKPSNLLIN-SAKNVKI-ADFGVSRILAQTMDPCNSSVGTIAY 234

Query: 109 RAPK 112
            +P+
Sbjct: 235 MSPE 238

Length = 353

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 48.5 bits (115), Expect = 1e-07
 Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 12/115 (10%)

Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV E ++ NL + I  +  +D   +   LY +L GI + H+  IIHRDL   N++    +
Sbjct: 103 LVMELMDANLCQVI--HMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK-SD 159

Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFG---RTNCFAAIDMWAV 129
            T+KI  D G+A+     F   T  +V   YRAP+++ G   + N    +D+W+V
Sbjct: 160 CTLKI-LDFGLARTACTNF-MMTPYVVTRYYRAPEVILGMGYKEN----VDIWSV 208

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 48.3 bits (115), Expect = 1e-07
 Identities = 28/102 (27%), Positives = 59/102 (57%), Gaps = 5/102 (4%)

Query: 31  IQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAK 90
           ++ Y   +  L++ F   +L G++Y H++ I+HRDL   NLL D +    KI +D G++K
Sbjct: 99  LRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADG-ICKI-SDFGISK 156

Query: 91  EIDAPFD--AHTTEMVILRYRAPKILFGRTNCFAA-IDMWAV 129
           + D  +D   + +    + + AP+++   +  ++A +D+W++
Sbjct: 157 KSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSL 198

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 48.5 bits (115), Expect = 1e-07
 Identities = 33/112 (29%), Positives = 59/112 (52%), Gaps = 6/112 (5%)

Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y +L G+ Y H+  IIHRDL   N+  + E+
Sbjct: 97  LVTNLMGADLNNIVKCQKLSDEH-VQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVN-ED 154

Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             ++I  D G+A++ D   D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 155 CELRI-LDFGLARQAD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 202

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 47.5 bits (114), Expect = 2e-07
 Identities = 32/125 (25%), Positives = 59/125 (47%), Gaps = 15/125 (12%)

Query: 17  NLVFEYVNI-NLHKFIQQY----HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNL 71
            +V EY +  +L + I++      P     I  +   +   + Y H+RKI+HRD+   N+
Sbjct: 75  CIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNI 134

Query: 72  LADIENKTVKIAADSGMAKEIDAPFDAHTTEMVI--LRYRAPKILFGRTNCFAAIDMWA- 128
                N  VK+  D G++K + +  D   T  V+    Y +P++   +   + + D+W+ 
Sbjct: 135 FLT-SNGLVKL-GDFGISKVLSSTVDLAKT--VVGTPYYLSPELCQNKPYNYKS-DIWSL 189

Query: 129 --VLY 131
             VLY
Sbjct: 190 GCVLY 194

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 47.6 bits (113), Expect = 2e-07
 Identities = 31/107 (28%), Positives = 54/107 (50%), Gaps = 14/107 (13%)

Query: 31  IQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAK 90
           + +Y      +I  +   +L G+SY H  +IIHRD+   NLL D   + ++I AD G A 
Sbjct: 94  LSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRI-ADFGAAA 152

Query: 91  EIDAPF---DAHTTEMV-ILRYRAPKIL----FGRTNCFAAIDMWAV 129
            + A          +++  + + AP++L    +GR+ C    D+W+V
Sbjct: 153 RLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRS-C----DVWSV 194

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 47.3 bits (112), Expect = 3e-07
 Identities = 41/119 (34%), Positives = 58/119 (48%), Gaps = 8/119 (6%)

Query: 18  LVFEYVN---INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
           LV EYVN   +  H   Q+  P +         CI   +++ H R II+RDL   N+L D
Sbjct: 73  LVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEICI--ALNFLHERGIIYRDLKLDNVLLD 130

Query: 75  IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
             +  +K+  D GM KE   P D  +T      Y AP+IL G    F ++D WA+  L+
Sbjct: 131 -ADGHIKL-TDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGF-SVDWWALGVLM 186

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 47.0 bits (112), Expect = 4e-07
 Identities = 31/85 (36%), Positives = 43/85 (50%), Gaps = 11/85 (12%)

Query: 48  CILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILR 107
           C++ G+ Y H  KI++RDL   NLL D E   VKI AD G+ KE     D  +T      
Sbjct: 109 CVVLGLQYLHENKIVYRDLKLDNLLLDTEGF-VKI-ADFGLCKEGMGFGDRTSTFCGTPE 166

Query: 108 YRAPKIL----FGRTNCFAAIDMWA 128
           + AP++L    + R     A+D W 
Sbjct: 167 FLAPEVLTETSYTR-----AVDWWG 186

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 46.4 bits (111), Expect = 6e-07
 Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 5/86 (5%)

Query: 13  HKRENL--VFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTM 69
              ENL  V EY  N  L ++I++Y  +D    + +   IL  + Y H++ IIHRDL   
Sbjct: 72  QDEENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPE 131

Query: 70  NLLADIENKTVKIAADSGMAKEIDAP 95
           N+L D ++  +KI  D G AK +D  
Sbjct: 132 NILLD-KDMHIKI-TDFGTAKVLDPN 155

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 46.2 bits (110), Expect = 8e-07
 Identities = 33/126 (26%), Positives = 62/126 (49%), Gaps = 10/126 (7%)

Query: 12  VHKRENLVF-EYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTM 69
           VH+ +  +F EY +   L + ++    +D H+I+ +   +L G++Y H+  I+HRD+   
Sbjct: 69  VHREKVYIFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPA 128

Query: 70  NLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILR----YRAPKILFG--RTNCFAA 123
           N+  D  N  +K+  D G A ++         E+  L     Y AP+++ G        A
Sbjct: 129 NIFLD-HNGVIKL-GDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRA 186

Query: 124 IDMWAV 129
            D+W++
Sbjct: 187 ADIWSL 192

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 46.1 bits (109), Expect = 1e-06
 Identities = 43/123 (34%), Positives = 63/123 (51%), Gaps = 8/123 (6%)

Query: 15  RENLVF--EYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNL 71
           +ENL F  EY+N  +L   IQ  H  D      +   I+ G+ + H++ I++RDL   N+
Sbjct: 68  KENLFFVMEYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNI 127

Query: 72  LADIENKTVKIAADSGMAKEIDAPFDAHTTEMV-ILRYRAPKILFGRTNCFAAIDMWAVL 130
           L D +   +KI AD GM KE +   DA T        Y AP+IL G+     ++D W+  
Sbjct: 128 LLDTDGH-IKI-ADFGMCKE-NMLGDAKTCTFCGTPDYIAPEILLGQKYNT-SVDWWSFG 183

Query: 131 YLL 133
            LL
Sbjct: 184 VLL 186

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 45.2 bits (107), Expect = 1e-06
 Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 8/113 (7%)

Query: 18  LVFEYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           LV EY+N  +    I+    +     K+++  ++ G+   H R IIHRD+   NLL D +
Sbjct: 74  LVMEYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLID-Q 132

Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
              +K+  D G+++          T      Y AP+ + G  +     D W++
Sbjct: 133 TGHLKL-TDFGLSRNGLENKKFVGTP----DYLAPETILGVGDD-KMSDWWSL 179

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 45.1 bits (106), Expect = 2e-06
 Identities = 40/117 (34%), Positives = 58/117 (49%), Gaps = 4/117 (3%)

Query: 18  LVFEYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
            V EYVN  +L   +Q+   +     + +   I   ++Y H R II+RDL   N+L D E
Sbjct: 73  FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE 132

Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
              +K+  D GM KE   P D  +T      Y AP+IL G    F ++D WA+  L+
Sbjct: 133 GH-IKL-TDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGF-SVDWWALGVLM 186

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 44.5 bits (106), Expect = 3e-06
 Identities = 34/115 (29%), Positives = 64/115 (55%), Gaps = 5/115 (4%)

Query: 17  NLVFEYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHA-RKIIHRDLTTMNLLAD 74
           ++V EY++  +L   +++   +   ++      IL G+ Y H  R IIHRD+   NLL +
Sbjct: 75  SIVLEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLIN 134

Query: 75  IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            + + VKI AD G++K ++   D   T +  + Y +P+ + G +  +AA D+W++
Sbjct: 135 SKGE-VKI-ADFGISKVLENTLDQCNTFVGTVTYMSPERIQGESYSYAA-DIWSL 186

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 44.4 bits (105), Expect = 3e-06
 Identities = 40/122 (32%), Positives = 60/122 (49%), Gaps = 6/122 (4%)

Query: 15  RENLVF--EYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNL 71
           +E+L F  EY+N  +L   IQ     D    + +   I+ G+ + H + II+RDL   N+
Sbjct: 68  KEHLFFVMEYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNV 127

Query: 72  LADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLY 131
           L D +   +KI AD GM KE        +T      Y AP+IL G+     ++D W+   
Sbjct: 128 LLDKDGH-IKI-ADFGMCKENMNGEGKASTFCGTPDYIAPEILKGQKYNE-SVDWWSFGV 184

Query: 132 LL 133
           LL
Sbjct: 185 LL 186

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 44.0 bits (104), Expect = 4e-06
 Identities = 36/130 (27%), Positives = 56/130 (43%), Gaps = 29/130 (22%)

Query: 18  LVFEYVNI-NLHKFIQQYH----PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLL 72
           +V EY    +L K I +       +    I +    +L G+   H +KI+HRDL + N+L
Sbjct: 76  IVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANIL 135

Query: 73  ADIENKTVKI-------AADSGMAK-EIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAI 124
             + N  VKI            MAK +I  P            Y AP++  GR   + + 
Sbjct: 136 L-VANDLVKIGDLGISKVLKKNMAKTQIGTPH-----------YMAPEVWKGRPYSYKS- 182

Query: 125 DMWA---VLY 131
           D+W+   +LY
Sbjct: 183 DIWSLGCLLY 192

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 44.0 bits (104), Expect = 5e-06
 Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 3/85 (3%)

Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRY 108
           I   +++ H R II+RDL   N+L D E   +K+  D GM KE   P D  +T      Y
Sbjct: 105 ISLALNFLHERGIIYRDLKLDNVLLDAEGH-IKL-TDYGMCKEGIRPGDTTSTFCGTPNY 162

Query: 109 RAPKILFGRTNCFAAIDMWAVLYLL 133
            AP+IL G    F ++D WA+  L+
Sbjct: 163 IAPEILRGEDYGF-SVDWWALGVLM 186

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 43.4 bits (103), Expect = 7e-06
 Identities = 31/121 (25%), Positives = 61/121 (50%), Gaps = 12/121 (9%)

Query: 18  LVFEYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           LV EY+   +L   ++    +D  + + ++  I+  + Y H+  IIHRDL   N+L D  
Sbjct: 70  LVMEYLPGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDS- 128

Query: 77  NKTVKIAADSGMAK------EIDAPFDAHTTEMVI--LRYRAPKILFGRTNCFAAIDMWA 128
           N  +K+  D G++K      +I+   D    + ++    Y AP+++ G+ +    +D W+
Sbjct: 129 NGHLKL-TDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSK-TVDWWS 186

Query: 129 V 129
           +
Sbjct: 187 L 187

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 43.5 bits (103), Expect = 7e-06
 Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 4/55 (7%)

Query: 40  HLIKKFLYC--ILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEI 92
            L K       I  G++Y  A+K +HRDL   N +   E+ TVKI  D GM ++I
Sbjct: 117 TLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVA-EDLTVKI-GDFGMTRDI 169

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 42.8 bits (101), Expect = 1e-05
 Identities = 15/37 (40%), Positives = 23/37 (62%)

Query: 40  HLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
            ++ K    +L G+SY H+RKIIHRD+   N+L   +
Sbjct: 105 KVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRK 141

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 42.6 bits (100), Expect = 1e-05
 Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 4/76 (5%)

Query: 18  LVFEYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           L+ EYV + +L  ++ + H ++   +  F   I  G++Y H++  IHRDL   N+L D +
Sbjct: 85  LIMEYVPLGSLRDYLPK-HKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDND 143

Query: 77  NKTVKIAADSGMAKEI 92
              VKI  D G+AK +
Sbjct: 144 R-LVKI-GDFGLAKAV 157

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 42.4 bits (100), Expect = 2e-05
 Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 4/75 (5%)

Query: 18  LVFEYVNI-NLHKFIQQYHP-MDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           L+ EY+   +L  ++Q++   ++   +  F   I  G+ Y  +++ IHRDL   N+L + 
Sbjct: 85  LIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVE- 143

Query: 76  ENKTVKIAADSGMAK 90
               VKI +D G+AK
Sbjct: 144 SEDLVKI-SDFGLAK 157

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 42.5 bits (100), Expect = 2e-05
 Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 2/81 (2%)

Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRY 108
           IL G+ Y H  +I+HRD+   N+L +  +  VKI +D G +K +        T    L+Y
Sbjct: 117 ILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKI-SDFGTSKRLAGINPCTETFTGTLQY 175

Query: 109 RAPKIL-FGRTNCFAAIDMWA 128
            AP+++  G     A  D+W+
Sbjct: 176 MAPEVIDKGPRGYGAPADIWS 196

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 42.2 bits (99), Expect = 2e-05
 Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 8/112 (7%)

Query: 27  LHKFIQQY--HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAA 84
           L ++IQ+     +D   I  F   IL  + + H + I+HRDL T N+L D     VKI  
Sbjct: 86  LAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKI-G 144

Query: 85  DSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWA---VLYLL 133
           D G++K + +   A+T  +    Y +P++  G+     + D+WA   VLY L
Sbjct: 145 DFGISKILSSKSKAYTV-VGTPCYISPELCEGKPYNQKS-DIWALGCVLYEL 194

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 42.4 bits (100), Expect = 2e-05
 Identities = 30/112 (26%), Positives = 57/112 (50%), Gaps = 6/112 (5%)

Query: 21  EYVNI-NLHKFI--QQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           EY N   L+  I  Q+    +  ++  +L+ I+S +SY H   I+HRD+ T+N+      
Sbjct: 79  EYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAG 138

Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +K+  D G++K + + +    T +    Y +P++  G    F + D+WA+
Sbjct: 139 -LIKL-GDFGISKILGSEYSMAETVVGTPYYMSPELCQGVKYNFKS-DIWAL 187

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 41.3 bits (97), Expect = 4e-05
 Identities = 30/90 (33%), Positives = 41/90 (45%), Gaps = 14/90 (15%)

Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRY 108
           I S + Y H+  II+RDL   N+L D +   V    D G+ KE        +T      Y
Sbjct: 105 IASALGYLHSLNIIYRDLKPENILLDSQGHVV--LTDFGLCKEGIEHSKTTSTFCGTPEY 162

Query: 109 RAPKIL----FGRTNCFAAIDMW---AVLY 131
            AP++L    + RT     +D W   AVLY
Sbjct: 163 LAPEVLRKQPYDRT-----VDWWCLGAVLY 187

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 41.5 bits (97), Expect = 4e-05
 Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 4/117 (3%)

Query: 18  LVFEYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
            V E++N  +L   IQ     D +    +   I+ G+ + H++ II+RDL   N++ D +
Sbjct: 73  FVMEFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRD 132

Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
              +KI AD GM KE     +  +T      Y AP+IL G    F ++D W+   LL
Sbjct: 133 GH-IKI-ADFGMCKENVFGDNRASTFCGTPDYIAPEILQGLKYTF-SVDWWSFGVLL 186

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 41.5 bits (97), Expect = 4e-05
 Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 5/84 (5%)

Query: 47  YCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAP--FDAHTTEMV 104
           Y +  G+ Y  ++K IHRDL   N+L   EN  +KI AD G+A++++    +   T   +
Sbjct: 144 YQVARGMEYLASQKCIHRDLAARNVLV-TENNVMKI-ADFGLARDVNNIDYYKKTTNGRL 201

Query: 105 ILRYRAPKILFGRTNCFAAIDMWA 128
            +++ AP+ LF R     + D+W+
Sbjct: 202 PVKWMAPEALFDRVYTHQS-DVWS 224

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 41.4 bits (97), Expect = 4e-05
 Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 7/83 (8%)

Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAP--FDAHTTEMVIL 106
           + +G++Y   RK +HRDL T N L   EN  VKI AD G+++ I +   + A   + + +
Sbjct: 139 VAAGMAYLSERKFVHRDLATRNCLVG-ENMVVKI-ADFGLSRNIYSADYYKASENDAIPI 196

Query: 107 RYRAPK-ILFGRTNCFAAIDMWA 128
           R+  P+ I + R    +  D+WA
Sbjct: 197 RWMPPESIFYNRYTTES--DVWA 217

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score = 41.2 bits (96), Expect = 5e-05
 Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 5/87 (5%)

Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEI--DAPFDAHTTEMVIL 106
           +  G+ +  +RK IHRDL   N+L   EN  VKI  D G+A++I  D  +       + L
Sbjct: 188 VAKGMEFLASRKCIHRDLAARNILLS-ENNVVKI-CDFGLARDIYKDPDYVRKGDARLPL 245

Query: 107 RYRAPKILFGRTNCFAAIDMWAVLYLL 133
           ++ AP+ +F R     + D+W+   LL
Sbjct: 246 KWMAPETIFDRVYTIQS-DVWSFGVLL 271

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 41.0 bits (96), Expect = 5e-05
 Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 14/97 (14%)

Query: 36  PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAK-EIDA 94
           P+D  LI      IL G+ Y HA++IIHRD+ T N+  +  +  V I  D G A+  + A
Sbjct: 155 PIDQALI--IEKQILEGLRYLHAQRIIHRDVKTENIFINDVD-QVCI-GDLGAAQFPVVA 210

Query: 95  PFD---AHTTEMVILRYRAPKILFGRTNCFAAIDMWA 128
           P     A T E       AP++L  R    +  D+W+
Sbjct: 211 PAFLGLAGTVET-----NAPEVL-ARDKYNSKADIWS 241

Length = 357

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 41.1 bits (96), Expect = 5e-05
 Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 14/90 (15%)

Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRY 108
           + S I Y H+  II+RDL   N+L D +   V    D G+ KE   P +  +T      Y
Sbjct: 105 VASAIGYLHSLNIIYRDLKPENILLDSQGHVV--LTDFGLCKEGVEPEETTSTFCGTPEY 162

Query: 109 RAPKIL----FGRTNCFAAIDMW---AVLY 131
            AP++L    + RT     +D W   AVLY
Sbjct: 163 LAPEVLRKEPYDRT-----VDWWCLGAVLY 187

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 40.8 bits (95), Expect = 6e-05
 Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 8/88 (9%)

Query: 5   MKSMSLWVHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHR 64
           +K   LW+      + EY+       + +  P+D   I   L  IL G+ Y H+ K IHR
Sbjct: 72  LKDTKLWI------IMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHR 125

Query: 65  DLTTMNLLADIENKTVKIAADSGMAKEI 92
           D+   N+L   E+  VK+ AD G+A ++
Sbjct: 126 DIKAANVLLS-EHGEVKL-ADFGVAGQL 151

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 40.6 bits (95), Expect = 6e-05
 Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 6/87 (6%)

Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEI-DAPFDAHTTEMVILR 107
           I S + Y   +  IHRDL   N L   EN  VK+ AD G+++ +    + AH      ++
Sbjct: 113 ISSAMEYLEKKNFIHRDLAARNCLVG-ENHLVKV-ADFGLSRLMTGDTYTAHAGAKFPIK 170

Query: 108 YRAPKILFGRTNCFAA-IDMWAVLYLL 133
           + AP+ L    N F+   D+WA   LL
Sbjct: 171 WTAPESL--AYNKFSIKSDVWAFGVLL 195

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 40.8 bits (95), Expect = 7e-05
 Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 5/89 (5%)

Query: 47  YCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAP--FDAHTTEMV 104
           Y +  G+ Y  ++K IHRDL   N+L   E+  +KI AD G+A++I     +   T   +
Sbjct: 147 YQVARGMEYLASKKCIHRDLAARNVLV-TEDNVMKI-ADFGLARDIHHIDYYKKTTNGRL 204

Query: 105 ILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
            +++ AP+ LF R     + D+W+   LL
Sbjct: 205 PVKWMAPEALFDRIYTHQS-DVWSFGVLL 232

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 40.4 bits (94), Expect = 8e-05
 Identities = 33/125 (26%), Positives = 58/125 (46%), Gaps = 9/125 (7%)

Query: 5   MKSMSLWVHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHR 64
           +K   LW+      + EY+       + +  P++   I   L  IL G+ Y H+ + IHR
Sbjct: 72  LKGTKLWI------IMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHR 125

Query: 65  DLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAI 124
           D+   N+L   E   VK+ AD G+A ++        T +    + AP+++      F A 
Sbjct: 126 DIKAANVLLS-EQGDVKL-ADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKA- 182

Query: 125 DMWAV 129
           D+W++
Sbjct: 183 DIWSL 187

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 40.6 bits (95), Expect = 8e-05
 Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 11/85 (12%)

Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRY 108
           I+S + Y H+  +++RDL   NL+ D ++  +KI  D G+ KE  +      T      Y
Sbjct: 104 IVSALGYLHSCDVVYRDLKLENLMLD-KDGHIKI-TDFGLCKEGISDGATMKTFCGTPEY 161

Query: 109 RAPKIL----FGRTNCFAAIDMWAV 129
            AP++L    +GR     A+D W +
Sbjct: 162 LAPEVLEDNDYGR-----AVDWWGL 181

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 40.4 bits (94), Expect = 9e-05
 Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 5/89 (5%)

Query: 47  YCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAP--FDAHTTEMV 104
           Y +  G+ Y  ++K IHRDL   N+L   E+  +KI AD G+A+++     +   T   +
Sbjct: 141 YQVARGMEYLASQKCIHRDLAARNVLV-TEDNVMKI-ADFGLARDVHNIDYYKKTTNGRL 198

Query: 105 ILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
            +++ AP+ LF R     + D+W+   LL
Sbjct: 199 PVKWMAPEALFDRVYTHQS-DVWSFGVLL 226

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 40.4 bits (95), Expect = 9e-05
 Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 4/71 (5%)

Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEI-DAPFDAHTTEMVILR 107
           I  G++Y  +R  IHRDL   N+L   EN   KI AD G+A+ I D  + A       ++
Sbjct: 112 IAEGMAYLESRNYIHRDLAARNILVG-ENLVCKI-ADFGLARLIEDDEYTAREGAKFPIK 169

Query: 108 YRAPK-ILFGR 117
           + AP+   +GR
Sbjct: 170 WTAPEAANYGR 180

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 40.4 bits (94), Expect = 9e-05
 Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 5/84 (5%)

Query: 52  GISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEI--DAPFDAHTTEMVILRYR 109
           G+ +  +RK IHRDL   N+L   EN  VKI  D G+A++I  D  +    +  + L++ 
Sbjct: 186 GMEFLASRKCIHRDLAARNILLS-ENNVVKI-CDFGLARDIYKDPDYVRKGSARLPLKWM 243

Query: 110 APKILFGRTNCFAAIDMWAVLYLL 133
           AP+ +F +     + D+W+   LL
Sbjct: 244 APESIFDKVYTTQS-DVWSFGVLL 266

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 40.1 bits (94), Expect = 1e-04
 Identities = 39/120 (32%), Positives = 55/120 (45%), Gaps = 12/120 (10%)

Query: 19  VFEYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           V EYVN  +L   IQQ           +   I  G+ + H++ II+RDL   N++ D E 
Sbjct: 79  VMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEG 138

Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKIL----FGRTNCFAAIDMWAVLYLL 133
             +KI AD GM KE         T      Y AP+I+    +G+     ++D WA   LL
Sbjct: 139 H-IKI-ADFGMCKENIFGGKTTRTFCGTPDYIAPEIIAYQPYGK-----SVDWWAFGVLL 191

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 40.0 bits (93), Expect = 1e-04
 Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 8/88 (9%)

Query: 5   MKSMSLWVHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHR 64
           +K   LW+      + EY+       + +  P D   I   L  IL G+ Y H+ K IHR
Sbjct: 72  LKGTKLWI------IMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHR 125

Query: 65  DLTTMNLLADIENKTVKIAADSGMAKEI 92
           D+   N+L   E   VK+ AD G+A ++
Sbjct: 126 DIKAANVLLS-EQGDVKL-ADFGVAGQL 151

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 39.6 bits (92), Expect = 1e-04
 Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 6/92 (6%)

Query: 44  KFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAK-EIDAPFDAHTTE 102
           KF     +G++Y  ++  IHRDL   N L   EN  +KI +D GM++ E D  + +   +
Sbjct: 97  KFALDAAAGMAYLESKNCIHRDLAARNCLVG-ENNVLKI-SDFGMSRQEDDGIYSSSGLK 154

Query: 103 MVILRYRAPKIL-FGRTNCFAAIDMWAVLYLL 133
            + +++ AP+ L +GR +  +  D+W+   LL
Sbjct: 155 QIPIKWTAPEALNYGRYS--SESDVWSYGILL 184

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 39.6 bits (93), Expect = 1e-04
 Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)

Query: 42  IKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEI 92
           I   LY  L G+ Y H+ K IHRD+   N+L + E    K+ AD G++ ++
Sbjct: 101 IAAILYQTLKGLEYLHSNKKIHRDIKAGNILLN-EEGQAKL-ADFGVSGQL 149

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 39.6 bits (92), Expect = 2e-04
 Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 2/62 (3%)

Query: 31  IQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAK 90
           ++ Y  +  ++ +++   IL G+SY H+  I+HRD+   N+L D     VK+  D G +K
Sbjct: 97  LKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRD-SAGNVKL-GDFGASK 154

Query: 91  EI 92
            I
Sbjct: 155 RI 156

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 39.3 bits (92), Expect = 2e-04
 Identities = 18/69 (26%), Positives = 39/69 (56%), Gaps = 4/69 (5%)

Query: 27  LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK-TVKIAAD 85
           L K++++   +    +K+  + +  G++Y  ++  +HRDL   N+L  + N+   KI +D
Sbjct: 82  LLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVL--LVNRHQAKI-SD 138

Query: 86  SGMAKEIDA 94
            GM++ + A
Sbjct: 139 FGMSRALGA 147

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 39.3 bits (91), Expect = 2e-04
 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)

Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRY 108
           IL G+S+ H  K+IHRD+   N+L   EN  VK+  D G++ ++D       T +    +
Sbjct: 120 ILRGLSHLHQHKVIHRDIKGQNVLL-TENAEVKL-VDFGVSAQLDRTVGRRNTFIGTPYW 177

Query: 109 RAPKILFGRTNCFAAIDMWAVLYLL 133
            AP+++    N  A  D  + L+ L
Sbjct: 178 MAPEVIACDENPDATYDFKSDLWSL 202

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 39.3 bits (92), Expect = 2e-04
 Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 2/60 (3%)

Query: 52  GISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAP 111
           G++Y   +  IHRDL   N+L   E+   K+ AD G+A+ I       + + +  ++ AP
Sbjct: 116 GMAYLEEQNSIHRDLAARNILVG-EDLVCKV-ADFGLARLIKEDVYLSSDKKIPYKWTAP 173

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 39.1 bits (91), Expect = 2e-04
 Identities = 37/120 (30%), Positives = 53/120 (44%), Gaps = 12/120 (10%)

Query: 19  VFEYVNINLHKF-IQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           V EYVN     F IQ+    D    + +   +   + + H   +I+RDL   N+L D E 
Sbjct: 74  VMEYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEG 133

Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKIL----FGRTNCFAAIDMWAVLYLL 133
              K+ AD GM KE        TT      Y AP+IL    +G      ++D WA+  L+
Sbjct: 134 H-CKL-ADFGMCKEGILNGVTTTTFCGTPDYIAPEILQELEYG-----PSVDWWALGVLM 186

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 39.1 bits (91), Expect = 2e-04
 Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 2/49 (4%)

Query: 44  KFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEI 92
           +F+  I SG+ Y  ++  IHRDL   N + + EN TV + AD G++K+I
Sbjct: 117 RFMIDIASGMEYLSSKNFIHRDLAARNCMLN-ENMTVCV-ADFGLSKKI 163

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 39.2 bits (91), Expect = 3e-04
 Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 5/89 (5%)

Query: 47  YCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEI-DAPFDAHTTE-MV 104
           Y +  G+ Y  +R+ IHRDL   N+L   +N  +KI AD G+A+ + D  +   T+   +
Sbjct: 141 YQVARGMEYLESRRCIHRDLAARNVLVTEDN-VMKI-ADFGLARGVHDIDYYKKTSNGRL 198

Query: 105 ILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
            +++ AP+ LF R     + D+W+   L+
Sbjct: 199 PVKWMAPEALFDRVYTHQS-DVWSFGILM 226

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 39.2 bits (91), Expect = 3e-04
 Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 14/90 (15%)

Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRY 108
           I S + Y H+  I++RDL   N+L D +   V    D G+ KE  A  D  TT      Y
Sbjct: 105 IASALGYLHSINIVYRDLKPENILLDSQGHVV--LTDFGLCKEGIAQSDTTTTFCGTPEY 162

Query: 109 RAPKIL----FGRTNCFAAIDMW---AVLY 131
            AP+++    +  T     +D W   AVLY
Sbjct: 163 LAPEVIRKQPYDNT-----VDWWCLGAVLY 187

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 38.9 bits (90), Expect = 3e-04
 Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 12/75 (16%)

Query: 26  NLHKFI--------QQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           +LH F+         QY P  + ++ KF+  I SG+ Y  ++  IHRDL   N + + EN
Sbjct: 92  DLHSFLLYSRLGDCPQYLP--TQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLN-EN 148

Query: 78  KTVKIAADSGMAKEI 92
             V + AD G++K+I
Sbjct: 149 MNVCV-ADFGLSKKI 162

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 38.6 bits (90), Expect = 3e-04
 Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 4/75 (5%)

Query: 18  LVFEYVNI-NLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           LV EY+   +L  ++Q++   +D   +  +   I  G+ Y  +++ +HRDL T N+L + 
Sbjct: 84  LVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVES 143

Query: 76  ENKTVKIAADSGMAK 90
           EN+ VKI  D G+ K
Sbjct: 144 ENR-VKI-GDFGLTK 156

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 38.8 bits (90), Expect = 3e-04
 Identities = 43/131 (32%), Positives = 58/131 (44%), Gaps = 26/131 (19%)

Query: 15  RENLVFEYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLA 73
           R   V EYVN  +L   IQQ           +   I  G+ + H R II+RDL   N++ 
Sbjct: 75  RLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVML 134

Query: 74  DIENKTVKIAADSGMAKEIDAPFDAHTTEMVILR-------YRAPKIL----FGRTNCFA 122
           D E   +KI AD GM KE       H  + V  R       Y AP+I+    +G++    
Sbjct: 135 DSEGH-IKI-ADFGMCKE-------HMVDGVTTRTFCGTPDYIAPEIIAYQPYGKS---- 181

Query: 123 AIDMWAVLYLL 133
            +D WA   LL
Sbjct: 182 -VDWWAYGVLL 191

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

 Score = 38.5 bits (89), Expect = 4e-04
 Identities = 28/92 (30%), Positives = 52/92 (56%), Gaps = 7/92 (7%)

Query: 45  FLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEI--DAPFDAHTTE 102
           F Y + +G+ +  ++  +HRDL   N+L   E K VKI  D G+A++I  D+ + +  + 
Sbjct: 244 FSYQVANGMEFLASKNCVHRDLAARNVLI-CEGKLVKI-CDFGLARDIMRDSNYISKGST 301

Query: 103 MVILRYRAPKILFGRTNCFAAI-DMWAVLYLL 133
            + L++ AP+ +F   N +  + D+W+   LL
Sbjct: 302 FLPLKWMAPESIF--NNLYTTLSDVWSFGILL 331

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 38.4 bits (89), Expect = 4e-04
 Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 2/66 (3%)

Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRY 108
           IL G+++ HA K+IHRD+   N+L   EN  VK+  D G++ ++D       T +    +
Sbjct: 130 ILRGLAHLHAHKVIHRDIKGQNVLL-TENAEVKL-VDFGVSAQLDRTVGRRNTFIGTPYW 187

Query: 109 RAPKIL 114
            AP+++
Sbjct: 188 MAPEVI 193

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 38.2 bits (89), Expect = 4e-04
 Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 7/86 (8%)

Query: 51  SGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEM--VILRY 108
           +G+ Y  ++  IHRDL   N L   EN  +KI +D GM++E +      +  +  + +++
Sbjct: 104 AGMEYLESKNCIHRDLAARNCLVG-ENNVLKI-SDFGMSREEEGGIYTVSDGLKQIPIKW 161

Query: 109 RAPKIL-FGRTNCFAAIDMWAVLYLL 133
            AP+ L +GR    +  D+W+   LL
Sbjct: 162 TAPEALNYGRYT--SESDVWSYGILL 185

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 38.0 bits (89), Expect = 5e-04
 Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 10/85 (11%)

Query: 48  CILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHT---TEMV 104
           C++    Y H R II+RDL   NLL D  N  VK+  D G AK++ +     T   T   
Sbjct: 101 CVVLAFEYLHNRGIIYRDLKPENLLLD-SNGYVKL-VDFGFAKKLKSGQKTWTFCGT--- 155

Query: 105 ILRYRAPKILFGRTNCFAAIDMWAV 129
              Y AP+I+  +   F+  D W++
Sbjct: 156 -PEYVAPEIILNKGYDFSV-DYWSL 178

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 37.7 bits (87), Expect = 7e-04
 Identities = 15/44 (34%), Positives = 26/44 (59%)

Query: 31  IQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
           ++ Y  +   + +K+   IL G+SY H+  I+HRD+   N+L D
Sbjct: 97  LKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRD 140

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 37.6 bits (87), Expect = 7e-04
 Identities = 29/121 (23%), Positives = 57/121 (47%), Gaps = 8/121 (6%)

Query: 17  NLVFEYVN---INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLA 73
           +L+ +YV+   +  H + +     D   ++ +   I+  + + H   I++RD+   N+L 
Sbjct: 81  HLILDYVSGGEMFTHLYQRDNFSEDE--VRFYSGEIILALEHLHKLGIVYRDIKLENILL 138

Query: 74  DIENKTVKIAADSGMAKEIDAPFDAHTTEMV-ILRYRAPKILFGRTNCFAAIDMWAVLYL 132
           D E   V    D G++KE  +     T      + Y AP+I+ G+     A+D W++  L
Sbjct: 139 DSEGHVV--LTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGIL 196

Query: 133 L 133
           +
Sbjct: 197 I 197

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 37.8 bits (88), Expect = 8e-04
 Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 5/91 (5%)

Query: 45  FLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAP--FDAHTTE 102
           F Y +  G+ +  ++K IHRDL   N+L   E+  +KI AD G+A++I     +   T  
Sbjct: 137 FAYQVARGMEFLASKKCIHRDLAARNVLVT-EDHVMKI-ADFGLARDIHHIDYYRKTTNG 194

Query: 103 MVILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
            + +++ AP+ LF R     + D+W+   LL
Sbjct: 195 RLPVKWMAPEALFDRVYTHQS-DVWSFGVLL 224

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 37.6 bits (87), Expect = 8e-04
 Identities = 41/123 (33%), Positives = 58/123 (47%), Gaps = 16/123 (13%)

Query: 18  LVFEYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
            V E+VN  +L   IQ+    D    + +   I S + + H + II+RDL   N+L D E
Sbjct: 73  FVMEFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHE 132

Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMV--ILRYRAPKIL----FGRTNCFAAIDMWAVL 130
               K+ AD GM KE    F+  TT        Y AP+IL    +G      ++D WA+ 
Sbjct: 133 GH-CKL-ADFGMCKE--GIFNGKTTSTFCGTPDYIAPEILQEMLYG-----PSVDWWAMG 183

Query: 131 YLL 133
            LL
Sbjct: 184 VLL 186

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 37.3 bits (86), Expect = 9e-04
 Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 7/86 (8%)

Query: 51  SGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEM--VILRY 108
           +G+ Y  ++  IHRDL   N L   E   +KI +D GM++E +    A T  M  + +++
Sbjct: 105 AGMEYLESKHCIHRDLAARNCLV-TEKNVLKI-SDFGMSREEEDGVYASTGGMKQIPVKW 162

Query: 109 RAPKIL-FGRTNCFAAIDMWAVLYLL 133
            AP+ L +GR +  +  D+W+   LL
Sbjct: 163 TAPEALNYGRYS--SESDVWSFGILL 186

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 37.3 bits (86), Expect = 0.001
 Identities = 15/44 (34%), Positives = 27/44 (61%)

Query: 31  IQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
           ++ Y  +  ++ +K+   IL G+SY H+  I+HRD+   N+L D
Sbjct: 97  LKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRD 140

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 37.1 bits (86), Expect = 0.001
 Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 5/84 (5%)

Query: 52  GISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEI--DAPFDAHTTEMVILRYR 109
           G+ +  +RK IHRDL   N+L   EN  VKI  D G+A++I  D  +       + L++ 
Sbjct: 185 GMEFLASRKCIHRDLAARNILLS-ENNVVKI-CDFGLARDIYKDPDYVRKGDARLPLKWM 242

Query: 110 APKILFGRTNCFAAIDMWAVLYLL 133
           AP+ +F +     + D+W+   LL
Sbjct: 243 APESIFDKVYTTQS-DVWSFGVLL 265

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 37.4 bits (86), Expect = 0.001
 Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 15/87 (17%)

Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMV--IL 106
           I+S + Y H+ KI++RDL   NL+ D ++  +KI  D G+ KE     DA T +      
Sbjct: 104 IVSALDYLHSGKIVYRDLKLENLMLD-KDGHIKI-TDFGLCKE--GITDAATMKTFCGTP 159

Query: 107 RYRAPKIL----FGRTNCFAAIDMWAV 129
            Y AP++L    +GR     A+D W +
Sbjct: 160 EYLAPEVLEDNDYGR-----AVDWWGL 181

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 37.2 bits (87), Expect = 0.001
 Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 2/58 (3%)

Query: 35  HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEI 92
             +    I      +L G+ Y H+  IIHRD+   N+L   + + VK+  D G++ ++
Sbjct: 93  QTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGE-VKL-IDFGLSAQL 148

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 37.2 bits (87), Expect = 0.001
 Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 17/105 (16%)

Query: 11  WVHKREN----LVFEYVNI-NLHKFIQQYH----PMDSHLIKKFLYCILSGISYCHAR-- 59
            +  R N    +V EY    +L + IQ+       ++   I + L  +L  +  CH R  
Sbjct: 67  RIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSD 126

Query: 60  ---KIIHRDLTTMNLLADIENKTVKIAADSGMAKEI-DAPFDAHT 100
               ++HRDL   N+  D  N  VK+  D G+AK +      A T
Sbjct: 127 PGNTVLHRDLKPANIFLD-ANNNVKL-GDFGLAKILGHDSSFAKT 169

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 37.2 bits (86), Expect = 0.001
 Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 7/83 (8%)

Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAP--FDAHTTEMVIL 106
           I SG+ Y  +   +HRDL T N L   EN T+KI AD GM++ + A   +      ++ +
Sbjct: 147 IASGMKYLSSLNFVHRDLATRNCLVG-ENLTIKI-ADFGMSRNLYAGDYYRIQGRAVLPI 204

Query: 107 RYRAPK-ILFGRTNCFAAIDMWA 128
           R+ A + IL G+     A D+WA
Sbjct: 205 RWMAWECILMGKFT--TASDVWA 225

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 36.8 bits (85), Expect = 0.001
 Identities = 26/110 (23%), Positives = 55/110 (50%), Gaps = 19/110 (17%)

Query: 31  IQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAK 90
           + ++ P+   +  K+   IL G++Y H   ++HRD+   N++  + N  +K+  D G A+
Sbjct: 93  LNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVML-MPNGIIKL-IDFGCAR 150

Query: 91  EIDAPFDAHTTEMVILR-------YRAPKIL----FGRTNCFAAIDMWAV 129
            + A    H T   +L+       + AP+++    +GR +     D+W++
Sbjct: 151 RL-AWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKS-----DIWSI 194

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 36.9 bits (85), Expect = 0.001
 Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 14/90 (15%)

Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRY 108
           I S + Y H+  I++RDL   N+L D +   V    D G+ KE        +T      Y
Sbjct: 105 IASALGYLHSLNIVYRDLKPENILLDSQGHIV--LTDFGLCKENIEHNGTTSTFCGTPEY 162

Query: 109 RAPKIL----FGRTNCFAAIDMW---AVLY 131
            AP++L    + RT     +D W   AVLY
Sbjct: 163 LAPEVLHKQPYDRT-----VDWWCLGAVLY 187

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 37.0 bits (86), Expect = 0.001
 Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 6/81 (7%)

Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRY 108
           I+  + Y H+++I++RDL   N+L D E   +K+  D G AK++    D   T      Y
Sbjct: 110 IVCALEYLHSKEIVYRDLKPENILLDKEGH-IKL-TDFGFAKKL---RDRTWTLCGTPEY 164

Query: 109 RAPKILFGRTNCFAAIDMWAV 129
            AP+++        A+D WA+
Sbjct: 165 LAPEVI-QSKGHNKAVDWWAL 184

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 36.7 bits (85), Expect = 0.001
 Identities = 29/116 (25%), Positives = 54/116 (46%), Gaps = 5/116 (4%)

Query: 17  NLVFEYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           +L+ +YVN   L   + Q        ++ ++  I+  + + H   II+RD+   N+L D 
Sbjct: 81  HLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDS 140

Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMV-ILRYRAPKILFGRTNCF-AAIDMWAV 129
           E   V    D G++KE  A  +         + Y AP+++ G +     A+D W++
Sbjct: 141 EGHVV--LTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSL 194

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 36.6 bits (85), Expect = 0.002
 Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 4/71 (5%)

Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEI-DAPFDAHTTEMVILR 107
           + SG++Y  A+  IHRDL   N+L   EN   K+ AD G+A+ I +  ++A       ++
Sbjct: 112 VASGMAYLEAQNYIHRDLAARNVLVG-ENNICKV-ADFGLARVIKEDIYEAREGAKFPIK 169

Query: 108 YRAPK-ILFGR 117
           + AP+  L+ R
Sbjct: 170 WTAPEAALYNR 180

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

 Score = 36.9 bits (85), Expect = 0.002
 Identities = 26/92 (28%), Positives = 51/92 (55%), Gaps = 7/92 (7%)

Query: 45  FLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEI--DAPFDAHTTE 102
           F Y +  G+ +  ++  +HRDL   N+L   + K VKI  D G+A++I  D+ + +  + 
Sbjct: 242 FTYQVARGMEFLASKNCVHRDLAARNVLLA-QGKIVKI-CDFGLARDIMHDSNYVSKGST 299

Query: 103 MVILRYRAPKILFGRTNCFAAI-DMWAVLYLL 133
            + +++ AP+ +F   N +  + D+W+   LL
Sbjct: 300 FLPVKWMAPESIF--DNLYTTLSDVWSYGILL 329

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 36.5 bits (84), Expect = 0.002
 Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 3/66 (4%)

Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRY 108
           +L G+ Y H R+I+HRDL   N+   ++N  +KI  D G+++ +    D  TT      Y
Sbjct: 115 LLLGVHYMHQRRILHRDLKAKNIF--LKNNLLKI-GDFGVSRLLMGSCDLATTFTGTPYY 171

Query: 109 RAPKIL 114
            +P+ L
Sbjct: 172 MSPEAL 177

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 36.7 bits (85), Expect = 0.002
 Identities = 18/41 (43%), Positives = 28/41 (68%), Gaps = 2/41 (4%)

Query: 52  GISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEI 92
           G+ Y  ++K +HRDL   N + D E+ TVK+ AD G+A++I
Sbjct: 110 GMEYLASKKFVHRDLAARNCMLD-ESFTVKV-ADFGLARDI 148

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 36.5 bits (85), Expect = 0.002
 Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 2/60 (3%)

Query: 36  PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAP 95
            +    I   L   L G++Y H  K+IHRD+   N+L   +N  VK+  D G++ ++D+ 
Sbjct: 109 RLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLT-KNAEVKL-VDFGVSAQLDST 166

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 36.3 bits (84), Expect = 0.002
 Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 1/49 (2%)

Query: 35  HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIA 83
             +    I+     +L  +++ H+ K+IHRDL   N+L  ++   VK+A
Sbjct: 98  RGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDG-DVKLA 145

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 36.5 bits (84), Expect = 0.002
 Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 2/44 (4%)

Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEI 92
           I  G++Y +A+K +HRDL   N +    + TVKI  D GM ++I
Sbjct: 128 IADGMAYLNAKKFVHRDLAARNCMV-AHDFTVKI-GDFGMTRDI 169

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

 Score = 36.2 bits (84), Expect = 0.002
 Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 7/88 (7%)

Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHT---TEMVI 105
           I  G+SY H R +IH+D+   N + D E   VKI  D+ +++++  P D H     E   
Sbjct: 126 IACGMSYLHKRGVIHKDIAARNCVID-EELQVKI-TDNALSRDL-FPMDYHCLGDNENRP 182

Query: 106 LRYRAPKILFGRTNCFAAIDMWAVLYLL 133
           +++ A + L  +    A+ D+W+   LL
Sbjct: 183 VKWMALESLVNKEYSSAS-DVWSFGVLL 209

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 36.3 bits (84), Expect = 0.002
 Identities = 32/120 (26%), Positives = 59/120 (49%), Gaps = 22/120 (18%)

Query: 18  LVFEYVNI-NLHKFIQQYHPMD-------SHLIKKFLYC---------ILSGISYCHARK 60
           ++FEY+   +LH+F+ +  P            +K  L C         I +G+ Y  +  
Sbjct: 85  MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH 144

Query: 61  IIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAP--FDAHTTEMVILRYRAPK-ILFGR 117
            +HRDL   N L   E  TVKI +D G++++I +   +   +  ++ +R+  P+ IL+G+
Sbjct: 145 FVHRDLAARNCLVG-EGLTVKI-SDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGK 202

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 36.2 bits (83), Expect = 0.003
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 6/87 (6%)

Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEI-DAPFDAHTTEMVILR 107
           I SG++Y      +HRDL   N+L   EN   K+ AD G+A+ I D  + A       ++
Sbjct: 111 IASGMAYVERMNYVHRDLRAANILVG-ENLVCKV-ADFGLARLIEDNEYTARQGAKFPIK 168

Query: 108 YRAPK-ILFGRTNCFAAIDMWAVLYLL 133
           + AP+  L+GR    +  D+W+   LL
Sbjct: 169 WTAPEAALYGRFTIKS--DVWSFGILL 193

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 36.1 bits (83), Expect = 0.003
 Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 4/78 (5%)

Query: 52  GISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEI-DAPFDAHTTEMVILRYRA 110
           G++Y  +  +IHRDL   N L   EN+ VK+ +D GM + + D  + + T     +++ +
Sbjct: 112 GMAYLESSNVIHRDLAARNCLVG-ENQVVKV-SDFGMTRFVLDDQYTSSTGTKFPVKWSS 169

Query: 111 PKILFGRTNCFAAIDMWA 128
           P++ F  +   +  D+W+
Sbjct: 170 PEV-FSFSKYSSKSDVWS 186

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional

 Score = 36.2 bits (83), Expect = 0.003
 Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 4/81 (4%)

Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMV-ILR 107
           +L  + Y H +K+IHRD+   N+  + + K V    D G A   +   +A     V  + 
Sbjct: 276 LLCAVEYIHDKKLIHRDIKLENIFLNCDGKIV--LGDFGTAMPFEKEREAFDYGWVGTVA 333

Query: 108 YRAPKILFGRTNCFAAIDMWA 128
             +P+IL G   C    D+W+
Sbjct: 334 TNSPEILAGDGYC-EITDIWS 353

Length = 501

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 35.8 bits (83), Expect = 0.003
 Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)

Query: 38  DSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIA 83
           D  +I   L  +L G+ Y H+   IHRD+   N+L   E+ +VKIA
Sbjct: 100 DEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLG-EDGSVKIA 144

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 36.3 bits (83), Expect = 0.003
 Identities = 27/127 (21%), Positives = 52/127 (40%), Gaps = 24/127 (18%)

Query: 26  NLHKFIQQYHPMDSHLIKKFLYCILSGISYCH-------ARKIIHRDLTTMNLLA----- 73
           N+ K  + +  ++ H I      +L  ++YCH         +++HRDL   N+       
Sbjct: 104 NIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIR 163

Query: 74  ----------DIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCF-A 122
                     ++  + +    D G++K I     AH+  +    Y +P++L   T  +  
Sbjct: 164 HIGKITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSC-VGTPYYWSPELLLHETKSYDD 222

Query: 123 AIDMWAV 129
             DMWA+
Sbjct: 223 KSDMWAL 229

Length = 1021

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 35.8 bits (83), Expect = 0.003
 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 2/49 (4%)

Query: 43  KKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKE 91
             F   +  G+ Y   +  +HRDL   N+L   +   V   +D G+AKE
Sbjct: 105 LGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDL--VAKVSDFGLAKE 151

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 35.8 bits (82), Expect = 0.003
 Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 11/85 (12%)

Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRY 108
           I+S + Y H+R +++RD+   NL+ D ++  +KI  D G+ KE  +      T      Y
Sbjct: 104 IVSALEYLHSRDVVYRDIKLENLMLD-KDGHIKI-TDFGLCKEGISDGATMKTFCGTPEY 161

Query: 109 RAPKIL----FGRTNCFAAIDMWAV 129
            AP++L    +GR     A+D W +
Sbjct: 162 LAPEVLEDNDYGR-----AVDWWGL 181

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 35.9 bits (83), Expect = 0.003
 Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 19/89 (21%)

Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTE------ 102
           I SG+ Y  ++  +HRDL T N L    +  VKI  D GM++      D +TT+      
Sbjct: 131 IASGMVYLASQHFVHRDLATRNCLVG-YDLVVKI-GDFGMSR------DVYTTDYYRVGG 182

Query: 103 --MVILRYRAPK-ILFGRTNCFAAIDMWA 128
             M+ +R+  P+ I++ +    +  D+W+
Sbjct: 183 HTMLPIRWMPPESIMYRKFTTES--DVWS 209

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 35.6 bits (82), Expect = 0.003
 Identities = 19/44 (43%), Positives = 30/44 (68%), Gaps = 2/44 (4%)

Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEI 92
           I+SG+ + H R+II+RDL   N+L D  +  V+I +D G+A E+
Sbjct: 106 IISGLEHLHQRRIIYRDLKPENVLLD-NDGNVRI-SDLGLAVEL 147

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 35.4 bits (82), Expect = 0.004
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 8/84 (9%)

Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEM---VI 105
           I +G+ Y  +++ IHRDL   N+L    +  VKI  D G+ + +    D +  E    V 
Sbjct: 106 IANGMRYLESKRFIHRDLAARNILL-ASDDKVKI-GDFGLMRALPQNEDHYVMEEHLKVP 163

Query: 106 LRYRAPKILFGRTNCFA-AIDMWA 128
             + AP+ L  RT  F+ A D+W 
Sbjct: 164 FAWCAPESL--RTRTFSHASDVWM 185

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 35.8 bits (83), Expect = 0.004
 Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 3/61 (4%)

Query: 17  NLVFEYVNI-NLHKFIQQYH-PMDSHLIKKFLYCILSGISYCH-ARKIIHRDLTTMNLLA 73
           ++  EY++  +L K +++    +   ++ K    +L G++Y H   KIIHRD+   N+L 
Sbjct: 75  SICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILV 134

Query: 74  D 74
           +
Sbjct: 135 N 135

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 35.6 bits (82), Expect = 0.004
 Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 2/49 (4%)

Query: 44  KFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEI 92
           KF+  I  G+ Y   R  IHRDL   N +   E+ TV   AD G++K+I
Sbjct: 117 KFMVDIALGMEYLSNRNFIHRDLAARNCMLR-EDMTV-CVADFGLSKKI 163

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	135
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	100.0
KOG0611	668	consensus Predicted serine/threonine protein kinas	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	100.0
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
KOG0694	694	consensus Serine/threonine protein kinase [Signal	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
KOG0605	550	consensus NDR and related serine/threonine kinases	100.0
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.98
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.97
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.97
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.97
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.97
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.97
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.97
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.97
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.97
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.97
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.97
KOG0589	426	consensus Serine/threonine protein kinase [General	99.97
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.97
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.97
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.97
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.97
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.97
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.97
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.97
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.97
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.97
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.97
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.97
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.97
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.97
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.97
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.97
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.97
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.97
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.97
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.97
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.97
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.97
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.97
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.97
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.97
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.97
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.97
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.97
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.97
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.97
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.97
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.97
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.97
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.97
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.97
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.97
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.97
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.97
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.97
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.97
PHA03212	391	serine/threonine kinase US3; Provisional	99.97
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.97
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.97
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.96
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.96
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.96
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.96
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.96
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.96
PTZ00036	440	glycogen synthase kinase; Provisional	99.96
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.96
PTZ00267	478	NIMA-related protein kinase; Provisional	99.96
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.96
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.96
PHA03207	392	serine/threonine kinase US3; Provisional	99.96
KOG0586	596	consensus Serine/threonine protein kinase [General	99.96
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.96
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.96
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.96
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.96
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.96
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.96
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.96
PHA03209	357	serine/threonine kinase US3; Provisional	99.96
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.96
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.96
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.96
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.96
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.96
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.96
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.96
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.96
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.96
KOG1152	772	consensus Signal transduction serine/threonine kin	99.96
PTZ00284	467	protein kinase; Provisional	99.96
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.96
PHA03211	461	serine/threonine kinase US3; Provisional	99.96
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.96
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.96
KOG0610	459	consensus Putative serine/threonine protein kinase	99.96
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.96
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.96
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.95
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.95
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.95
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.95
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.95
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.95
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.95
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.95
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.95
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.95
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.95
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.95
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.95
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.95
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.95
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.95
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.95
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.95
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.95
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.95
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.95
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.95
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.95
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.95
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.95
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.95
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.95
PHA02988	283	hypothetical protein; Provisional	99.95
PHA03210	501	serine/threonine kinase US3; Provisional	99.95
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.95
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.95
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.95
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.95
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.95
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.95
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.95
PLN00009	294	cyclin-dependent kinase A; Provisional	99.95
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.95
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.95
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.95
PTZ00283	496	serine/threonine protein kinase; Provisional	99.95
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.95
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.95
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.95
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.95
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.95
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.95
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.95
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.95
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.95
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.95
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.95
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.95
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.95
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.95
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.95
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.95
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.95
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.95
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.95
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.95
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.95
KOG0584	632	consensus Serine/threonine protein kinase [General	99.94
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.94
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.94
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.94
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.94
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.94
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.94
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.94
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.94
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.94
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.94
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.94
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.94
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.94
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.94
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.94
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.94
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.94
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.94
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.94
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.94
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.94
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.94
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.94
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.94
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.94
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.94
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.94
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.94
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.94
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.94
PHA02882	294	putative serine/threonine kinase; Provisional	99.94
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.94
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.94
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.94
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.94
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.94
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.94
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.94
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.94
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.94
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.94
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.94
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.94
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.94
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.94
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.94
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.94
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.94
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.94
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.94
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.94
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.94
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.94
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.94
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.94
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.94
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.94
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.94
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.94
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.94
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.94
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.94
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.94
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.94
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.94
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.94
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.94
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.94
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.94
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.94
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.94
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.94
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.94
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.94
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.94
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.94
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.94
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.94
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.94
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.94
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.94
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.94
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.94
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.94
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.94
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.94
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.94
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.94
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.94
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.94
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.94
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.94
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.94
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.93
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.93
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.93
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.93
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.93
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.93
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.93
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.93
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.93
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.93
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.93
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.93
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.93
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.93
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.93
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.93
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.93
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.93
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.93
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.93
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.93
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.93
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.93
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.93
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.93
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.93
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.93
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.93
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.93
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.93
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.93
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.93
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.93
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.93
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.93
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.93
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.93
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.93
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.93
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.93
PLN00181	793	protein SPA1-RELATED; Provisional	99.93
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.93
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.93
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.93
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.93
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.93
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.93
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.93
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.93
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.93
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.93
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.93
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.93
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.93
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.93
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.93
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.93
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.93
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.93
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.93
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.93
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.93
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.93
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.93
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.93
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.93
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.93
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.93
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.93
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.93
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.93
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.92
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.92
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.92
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.92
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.92
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.92
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.92
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.92
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.92
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.92
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.92
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.92
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.92
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.92
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.92
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.92
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.92
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.92
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.92
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.92
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.92
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.92
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.92
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.92
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.92
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.92
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.92
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.92
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.92
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.92
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.92
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.92
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.92
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.91
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.91
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.91
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.91
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.91
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.91
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.91
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.91
KOG3653	534	consensus Transforming growth factor beta/activin	99.91
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.91
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.9
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.9
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.9
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.9
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.89
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.89
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.89
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.88
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.87
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.87
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.86
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.86
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.86
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.85
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.84
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.84
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.84
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.84
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.82
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.82
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.8
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.8
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.77
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.77
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.76
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.66
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.65
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.64
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.64
PRK09188	365	serine/threonine protein kinase; Provisional	99.63
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.63
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.63
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.61
PRK12274	218	serine/threonine protein kinase; Provisional	99.58
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.56
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.53
smart00090	237	RIO RIO-like kinase.	99.52
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.48
PRK10345	210	hypothetical protein; Provisional	99.48
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.44
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.38
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.37
PRK14879	211	serine/threonine protein kinase; Provisional	99.36
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.35
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.33
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.31
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.29
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.2
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.18
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.14
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	99.04
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	99.0
KOG1266	458	consensus Protein kinase [Signal transduction mech	98.99
KOG3087	229	consensus Serine/threonine protein kinase [General	98.97
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	98.95
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	98.94
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	98.8
KOG1243	690	consensus Protein kinase [General function predict	98.78
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	98.73
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	98.71
KOG2137	700	consensus Protein kinase [Signal transduction mech	98.68
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	98.67
KOG0606	1205	consensus Microtubule-associated serine/threonine	98.66
PRK09902	216	hypothetical protein; Provisional	98.61
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	98.55
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	98.54
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	98.39
COG4248	637	Uncharacterized protein with protein kinase and he	98.16
COG0478	304	RIO-like serine/threonine protein kinase fused to	98.12
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	98.01
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	97.94
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	97.76
COG0661	517	AarF Predicted unusual protein kinase [General fun	97.03
KOG1235	538	consensus Predicted unusual protein kinase [Genera	96.95
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	96.83
KOG2270	520	consensus Serine/threonine protein kinase involved	96.53
KOG0576	829	consensus Mitogen-activated protein kinase kinase	96.44
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	95.54
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	95.14
KOG2268	465	consensus Serine/threonine protein kinase [Signal	94.99
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	94.97
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	94.9
PRK05231	319	homoserine kinase; Provisional	94.89
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	94.83
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	94.73
KOG1826	2724	consensus Ras GTPase activating protein RasGAP/neu	94.71
PF01636	239	APH: Phosphotransferase enzyme family This family	94.6
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	94.51
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	94.29
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	93.9
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	93.6
PLN02236	344	choline kinase	93.4
COG2334	331	Putative homoserine kinase type II (protein kinase	92.92
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	92.76
COG0510	269	ycfN Thiamine kinase and related kinases [Coenzyme	92.69
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	92.36
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	92.13
PHA03111	444	Ser/Thr kinase; Provisional	91.9
PRK10271	188	thiK thiamine kinase; Provisional	91.82
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	91.81
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	91.58
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	91.29
PRK06149	972	hypothetical protein; Provisional	91.18
PF05445	434	Pox_ser-thr_kin: Poxvirus serine/threonine protein	90.72
smart00587	196	CHK ZnF_C4 abd HLH domain containing kinases domai	90.67
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	90.57
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	89.15
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	88.17
PRK11768	325	serine/threonine protein kinase; Provisional	87.33
PRK12396	409	5-methylribose kinase; Reviewed	87.17
PRK06148	1013	hypothetical protein; Provisional	86.91
KOG1236	565	consensus Predicted unusual protein kinase [Genera	85.94
PF02958	294	EcKinase: Ecdysteroid kinase; InterPro: IPR004119	84.29
PRK09550	401	mtnK methylthioribose kinase; Reviewed	84.19
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	83.69

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=1e-38  Score=212.63  Aligned_cols=130  Identities=25%  Similarity=0.405  Sum_probs=115.4

Q ss_pred             ccchhhhccce-ecceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecC--C
Q 043346            2 QEMMKSMSLWV-HKRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE--N   77 (135)
Q Consensus         2 ~~~~~~~~~~~-~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~--~   77 (135)
                      .|||.++++.. ++..|+|||||+ |||.+|++..+.+++..+..++.|++.|+++||+++|+||||||+||++...  +
T Consensus        69 ~nIV~l~d~~~~~~~i~lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~  148 (429)
T KOG0595|consen   69 PNIVRLLDCIEDDDFIYLVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARN  148 (429)
T ss_pred             cceeeEEEEEecCCeEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCC
Confidence            47888988884 448999999996 6999999999999999999999999999999999999999999999999843  2


Q ss_pred             ---CeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           78 ---KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 ---~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                         ..+|+ +|||+++..... ....+.+|+|.|||||++.... ++.++|+||+|+++|
T Consensus       149 ~~~~~LKI-ADFGfAR~L~~~-~~a~tlcGSplYMAPEV~~~~~-YdAKADLWSiG~Ily  205 (429)
T KOG0595|consen  149 DTSPVLKI-ADFGFARFLQPG-SMAETLCGSPLYMAPEVIMSQQ-YDAKADLWSIGTILY  205 (429)
T ss_pred             CCCceEEe-cccchhhhCCch-hHHHHhhCCccccCHHHHHhcc-ccchhhHHHHHHHHH
Confidence               45789 899999987644 5667789999999999997666 788999999999998

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=3.4e-38  Score=207.84  Aligned_cols=129  Identities=31%  Similarity=0.409  Sum_probs=117.2

Q ss_pred             chhh-hccceecceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeE
Q 043346            4 MMKS-MSLWVHKRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVK   81 (135)
Q Consensus         4 ~~~~-~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~   81 (135)
                      ++++ ++|++..+.|+|+||++ |.|..++++++.++++.+..++.+|+.||.|||+.||+|||+||+||+++ ..|+++
T Consensus        87 iv~l~ysFQt~~kLylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd-~~GHi~  165 (357)
T KOG0598|consen   87 IVKLIYSFQTEEKLYLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLD-EQGHIK  165 (357)
T ss_pred             EeeeEEecccCCeEEEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeec-CCCcEE
Confidence            3444 67778889999999995 69999999999999999999999999999999999999999999999999 789999


Q ss_pred             EecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           82 IAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        82 i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      + .|||+++..........+++||+.|||||++.+.+ ++..+|+||||+++|.
T Consensus       166 L-tDFgL~k~~~~~~~~t~tfcGT~eYmAPEil~~~g-y~~~vDWWsLGillYe  217 (357)
T KOG0598|consen  166 L-TDFGLCKEDLKDGDATRTFCGTPEYMAPEILLGKG-YDKAVDWWSLGILLYE  217 (357)
T ss_pred             E-eccccchhcccCCCccccccCCccccChHHHhcCC-CCcccchHhHHHHHHH
Confidence            9 89999997766666777899999999999999887 8899999999999983

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.6e-37  Score=209.10  Aligned_cols=132  Identities=24%  Similarity=0.435  Sum_probs=118.8

Q ss_pred             ccchhhhccc-eecceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLW-VHKRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~-~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .||++++++. +..+.|+||||+. |+|.+++.+.+++.+.++..++.|++.|++|||++||+||||||+|++++...+.
T Consensus        80 pnI~~l~ev~~t~~~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~  159 (370)
T KOG0583|consen   80 PNIIRLLEVFATPTKIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGN  159 (370)
T ss_pred             CCEeEEEEEEecCCeEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCC
Confidence            3788888888 4448999999995 6999999998999999999999999999999999999999999999999943399


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCC-CCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRT-NCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~-~~~~~~D~wslg~il~  134 (135)
                      +|+ +|||++...........+.+||+.|+|||++.+.. +.+.++|+||+||+||
T Consensus       160 ~Kl-~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy  214 (370)
T KOG0583|consen  160 LKL-SDFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILY  214 (370)
T ss_pred             EEE-eccccccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHH
Confidence            999 89999997754446778899999999999999987 7789999999999998

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=4.8e-37  Score=212.75  Aligned_cols=130  Identities=25%  Similarity=0.409  Sum_probs=122.3

Q ss_pred             ccchhhhccceec-ceeEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      +|||+++.+++++ +.|+|.|.| +++|..++++.+.++|.++..++.||+.|+.|||+.+|+|||||..|++++ ++-.
T Consensus        78 pnIV~f~~~FEDs~nVYivLELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~-~~~~  156 (592)
T KOG0575|consen   78 PNIVQFYHFFEDSNNVYIVLELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLN-ENMN  156 (592)
T ss_pred             CcEEeeeeEeecCCceEEEEEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeec-CcCc
Confidence            6899999999877 899999999 589999999989999999999999999999999999999999999999999 7789


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +|| +|||+|.....+.....+.+|||-|.|||++.+.. .+..+|+||+||++|
T Consensus       157 VKI-gDFGLAt~le~~~Erk~TlCGTPNYIAPEVl~k~g-HsfEvDiWSlGcvmY  209 (592)
T KOG0575|consen  157 VKI-GDFGLATQLEYDGERKKTLCGTPNYIAPEVLNKSG-HSFEVDIWSLGCVMY  209 (592)
T ss_pred             EEe-cccceeeeecCcccccceecCCCcccChhHhccCC-CCCchhhhhhhhHHH
Confidence            999 79999999988878889999999999999998655 788999999999998

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3.5e-37  Score=205.82  Aligned_cols=131  Identities=24%  Similarity=0.345  Sum_probs=114.5

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecC--C
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE--N   77 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~--~   77 (135)
                      .|||+..++++.. ..|+||||++ |+|.+++-.++.+.++..+.+++|++.|+.|||++||+||||||+||++..+  .
T Consensus       236 P~IV~~~d~f~~~ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~  315 (475)
T KOG0615|consen  236 PNIVRIKDFFEVPDSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAED  315 (475)
T ss_pred             CCEEEEeeeeecCCceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcc
Confidence            4788999999776 6699999995 6999999999999999999999999999999999999999999999999843  2


Q ss_pred             CeeEEecccccccccCCCCCCCCCCcccccccCcccccCCC--CCCchhHHHHhhhhhh
Q 043346           78 KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRT--NCFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~--~~~~~~D~wslg~il~  134 (135)
                      ..+|+ +|||+++... ......+++|||.|.|||++.++.  .++.++|+||+||+||
T Consensus       316 ~llKI-tDFGlAK~~g-~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLf  372 (475)
T KOG0615|consen  316 CLLKI-TDFGLAKVSG-EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLF  372 (475)
T ss_pred             eEEEe-cccchhhccc-cceehhhhcCCccccChhheecCCeecccchheeeeccceEE
Confidence            56788 8999999776 446678899999999999996543  3456899999999997

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=8.8e-36  Score=192.24  Aligned_cols=125  Identities=28%  Similarity=0.380  Sum_probs=111.6

Q ss_pred             hhhhccc-eecceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEE
Q 043346            5 MKSMSLW-VHKRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKI   82 (135)
Q Consensus         5 ~~~~~~~-~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i   82 (135)
                      ++++..+ ...+.|+||||.+ |.|.+++++.++++++.+..++.||+.|++|||+++|++||+||+||+++ .+|.+|+
T Consensus       107 v~l~~t~~d~~~lymvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD-~~G~iKi  185 (355)
T KOG0616|consen  107 VKLYGTFKDNSNLYMVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLD-QNGHIKI  185 (355)
T ss_pred             EEEEEeeccCCeEEEEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeec-cCCcEEE
Confidence            4444333 4458999999995 69999999999999999999999999999999999999999999999999 7899999


Q ss_pred             ecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           83 AADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        83 ~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                       .|||+++.....   ..+.+|||.|+|||+++.++ +..++|+|||||++|.
T Consensus       186 -tDFGFAK~v~~r---T~TlCGTPeYLAPEii~sk~-ynkavDWWalGVLIYE  233 (355)
T KOG0616|consen  186 -TDFGFAKRVSGR---TWTLCGTPEYLAPEIIQSKG-YNKAVDWWALGVLIYE  233 (355)
T ss_pred             -EeccceEEecCc---EEEecCCccccChHHhhcCC-CCcchhHHHHHHHHHH
Confidence             799999987554   56779999999999999887 7889999999999984

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.7e-36  Score=193.86  Aligned_cols=130  Identities=18%  Similarity=0.343  Sum_probs=115.7

Q ss_pred             ccchhhhc-cc-eecc-eeEEEeccC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhh--CC--cccCCCCCc
Q 043346            2 QEMMKSMS-LW-VHKR-ENLVFEYVN-INLHKFIQQ----YHPMDSHLIKKFLYCILSGISYCHA--RK--IIHRDLTTM   69 (135)
Q Consensus         2 ~~~~~~~~-~~-~~~~-~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lh~--~~--i~h~dl~~~   69 (135)
                      .|||+.+. .+ .++. .+++||+|+ |+|.+.++.    +..+++..+++++.|++.||.+||.  .+  +.||||||.
T Consensus        78 pNIVqYy~~~f~~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPa  157 (375)
T KOG0591|consen   78 PNIVQYYAHSFIEDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPA  157 (375)
T ss_pred             chHHHHHHHhhhccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcch
Confidence            47888877 33 3445 789999995 799998874    4578999999999999999999999  45  999999999


Q ss_pred             ceeeecCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           70 NLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        70 nil~~~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ||+++ .++.+|+ .|||+++.+....+...+.+|||.||+||.+.+.+ +.+++|+||+||++|
T Consensus       158 NIFl~-~~gvvKL-GDfGL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~-Y~~kSDiWslGClly  219 (375)
T KOG0591|consen  158 NIFLT-ANGVVKL-GDFGLGRFLSSKTTFAHSLVGTPYYMSPERIHESG-YNFKSDIWSLGCLLY  219 (375)
T ss_pred             heEEc-CCCceee-ccchhHhHhcchhHHHHhhcCCCcccCHHHHhcCC-CCcchhHHHHHHHHH
Confidence            99999 8899999 79999999988888889999999999999998887 789999999999998

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=2.1e-35  Score=194.87  Aligned_cols=127  Identities=24%  Similarity=0.404  Sum_probs=114.5

Q ss_pred             cchhhhccceec-c-eeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhh-CCcccCCCCCcceeeecCCC
Q 043346            3 EMMKSMSLWVHK-R-ENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHA-RKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         3 ~~~~~~~~~~~~-~-~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~~~nil~~~~~~   78 (135)
                      +||+.++.+..+ . ..++||||+ |||.+++++.+++++.....++.+++.||.|||+ ++|+||||||+|++++ ..+
T Consensus       138 yIV~~ygaF~~~~~~isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvN-skG  216 (364)
T KOG0581|consen  138 YIVGFYGAFYSNGEEISICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVN-SKG  216 (364)
T ss_pred             CeeeEeEEEEeCCceEEeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeec-cCC
Confidence            578888888665 3 899999996 6999999998999999999999999999999995 9999999999999999 689


Q ss_pred             eeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           79 TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .+|+ +|||.+......  ...+++||..|||||-+.+.. ++.++|+||||+.+.
T Consensus       217 eVKi-cDFGVS~~lvnS--~a~tfvGT~~YMsPERi~g~~-Ys~~sDIWSLGLsll  268 (364)
T KOG0581|consen  217 EVKI-CDFGVSGILVNS--IANTFVGTSAYMSPERISGES-YSVKSDIWSLGLSLL  268 (364)
T ss_pred             CEEe-ccccccHHhhhh--hcccccccccccChhhhcCCc-CCcccceecccHHHH
Confidence            9999 999999877554  678899999999999999987 788899999998763

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=4.3e-35  Score=205.16  Aligned_cols=130  Identities=34%  Similarity=0.515  Sum_probs=118.9

Q ss_pred             ccchhhhccceec-ceeEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++.+++.|+.+ +.|+|.||+ +|.|++++.+++++++.++.+++.||+.|+.|||.-+|+|||+||+|++++. ...
T Consensus        72 pnVl~LydVwe~~~~lylvlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~-~~n  150 (786)
T KOG0588|consen   72 PNVLRLYDVWENKQHLYLVLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDV-KNN  150 (786)
T ss_pred             CCeeeeeeeeccCceEEEEEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhc-ccC
Confidence            3789999999766 899999999 5799999999999999999999999999999999999999999999999994 455


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +|| +|||+|..-..+ ....+.+|+|+|.|||++.|.++.+.++||||.|||||
T Consensus       151 IKI-ADFGMAsLe~~g-klLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILf  203 (786)
T KOG0588|consen  151 IKI-ADFGMASLEVPG-KLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILF  203 (786)
T ss_pred             Eee-eccceeecccCC-ccccccCCCcccCCchhhcCCCCCCCccccchhHHHHH
Confidence            999 899999865444 66777899999999999999999999999999999997

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=1e-34  Score=199.35  Aligned_cols=129  Identities=27%  Similarity=0.420  Sum_probs=112.8

Q ss_pred             chhhhccc-eecceeEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeE
Q 043346            4 MMKSMSLW-VHKRENLVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVK   81 (135)
Q Consensus         4 ~~~~~~~~-~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~   81 (135)
                      +++++--+ ++...|+|+||+ +|+|.+++.+.+.+++.....++.+|+.|++|||++||+||||||+|||++ .+++++
T Consensus       136 ivkLy~TFQD~~sLYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd-~dmhik  214 (604)
T KOG0592|consen  136 IVKLYFTFQDEESLYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLD-KDGHIK  214 (604)
T ss_pred             eEEEEEEeecccceEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEc-CCCcEE
Confidence            56665545 455999999999 789999999999999999999999999999999999999999999999999 789999


Q ss_pred             EecccccccccCCCC-------------CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           82 IAADSGMAKEIDAPF-------------DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        82 i~~d~~~~~~~~~~~-------------~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      | .|||.++.+.+..             .....++||..|.+||++.... .++.+|+|+|||++|.
T Consensus       215 I-TDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~-~~~~sDiWAlGCilyQ  279 (604)
T KOG0592|consen  215 I-TDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSP-AGPSSDLWALGCILYQ  279 (604)
T ss_pred             E-eeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCC-CCcccchHHHHHHHHH
Confidence            9 8999998764211             1125699999999999998877 7889999999999983

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-34  Score=196.30  Aligned_cols=130  Identities=28%  Similarity=0.489  Sum_probs=117.0

Q ss_pred             ccchhhhccceec--ceeEEEeccCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHK--RENLVFEYVNINLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~--~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      .|||++.+.+-++  ..|+|||+|+.+|++.++. +..+++..+..|+.||++||+|+|++|+.|||+||+||++. ...
T Consensus        69 pniikL~Evi~d~~~~L~fVfE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~-~~~  147 (538)
T KOG0661|consen   69 PNIIKLKEVIRDNDRILYFVFEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILIS-GND  147 (538)
T ss_pred             CcchhhHHHhhccCceEeeeHHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEec-ccc
Confidence            4789999988443  7899999999999999986 55799999999999999999999999999999999999999 578


Q ss_pred             eeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           79 TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .+|| +|||+|+.+.+. .+-+.++.|..|.|||+++....++.+.|+||+|||++
T Consensus       148 ~iKi-aDFGLARev~Sk-pPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~a  201 (538)
T KOG0661|consen  148 VIKI-ADFGLAREVRSK-PPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMA  201 (538)
T ss_pred             eeEe-cccccccccccC-CCcchhhhcccccchHHhhhccccCCchHHHHHHHHHH
Confidence            8999 899999988654 45667788999999999988888999999999999986

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.4e-34  Score=196.20  Aligned_cols=131  Identities=33%  Similarity=0.574  Sum_probs=118.5

Q ss_pred             ccchhhhccceec---ceeEEEeccCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC
Q 043346            2 QEMMKSMSLWVHK---RENLVFEYVNINLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN   77 (135)
Q Consensus         2 ~~~~~~~~~~~~~---~~~lv~e~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~   77 (135)
                      +||+++.+..+++   ..|+|+|||+-||.-++... -.|++.++++++.|++.||+|||++|++|||||.+|||++ +.
T Consensus       176 pNIikL~eivt~~~~~siYlVFeYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLid-n~  254 (560)
T KOG0600|consen  176 PNIIKLEEIVTSKLSGSIYLVFEYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILID-NN  254 (560)
T ss_pred             CcccceeeEEEecCCceEEEEEecccchhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEc-CC
Confidence            5889998888665   78999999999999999874 4899999999999999999999999999999999999999 88


Q ss_pred             CeeEEecccccccccCCCCC-CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           78 KTVKIAADSGMAKEIDAPFD-AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +.+|| +|||+++.+..... ..+..+.|..|.|||.++|...++.++|+||.||||.
T Consensus       255 G~LKi-aDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~  311 (560)
T KOG0600|consen  255 GVLKI-ADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILA  311 (560)
T ss_pred             CCEEe-ccccceeeccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHH
Confidence            99999 89999997765433 4677788999999999999999999999999999985

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=3.8e-34  Score=192.28  Aligned_cols=130  Identities=26%  Similarity=0.451  Sum_probs=121.2

Q ss_pred             ccchhhhccceec-ceeEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .+||.+++.|+++ ...+||||. +|.|++|+.+.+.+++.++.++++||++|+-|||+++++|||||.+||+++ .+++
T Consensus       113 PhII~IyEVFENkdKIvivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD-~N~N  191 (668)
T KOG0611|consen  113 PHIIQIYEVFENKDKIVIVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLD-QNNN  191 (668)
T ss_pred             CceeehhhhhcCCceEEEEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeec-CCCC
Confidence            4789999999776 899999999 579999999999999999999999999999999999999999999999999 8899


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +|| +|||++..+... ...++++|+|-|.+||+..|.++-++.+|-|||||+||
T Consensus       192 iKI-ADFGLSNly~~~-kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLY  244 (668)
T KOG0611|consen  192 IKI-ADFGLSNLYADK-KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLY  244 (668)
T ss_pred             eee-eccchhhhhccc-cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHH
Confidence            999 899999876554 67789999999999999999998899999999999998

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=6.2e-34  Score=184.57  Aligned_cols=131  Identities=32%  Similarity=0.603  Sum_probs=119.5

Q ss_pred             ccchhhhccceec-ceeEEEeccCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNINLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++.+.+.+-++ +.++|+|||+-++.+-+.+ ..+++++.+..++.|++.|+.|||+++++||||||+||++. .++.
T Consensus        61 ~NLVnLiEVFrrkrklhLVFE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit-~~gv  139 (396)
T KOG0593|consen   61 ENLVNLIEVFRRKRKLHLVFEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILIT-QNGV  139 (396)
T ss_pred             chHHHHHHHHHhcceeEEEeeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEe-cCCc
Confidence            4788888888655 8999999999887777776 45799999999999999999999999999999999999999 7899


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +|+ +|||+|+.+..+...-+.++.|..|.|||.+.|..++++++|+||+||++.
T Consensus       140 vKL-CDFGFAR~L~~pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~a  193 (396)
T KOG0593|consen  140 VKL-CDFGFARTLSAPGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFA  193 (396)
T ss_pred             EEe-ccchhhHhhcCCcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHH
Confidence            999 999999999877777888999999999999999888999999999999974

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=100.00  E-value=1.6e-33  Score=185.16  Aligned_cols=129  Identities=31%  Similarity=0.623  Sum_probs=115.4

Q ss_pred             chhhhcccee-c------ceeEEEeccCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCccee
Q 043346            4 MMKSMSLWVH-K------RENLVFEYVNINLHKFIQQYH----PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLL   72 (135)
Q Consensus         4 ~~~~~~~~~~-~------~~~lv~e~~~~~L~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil   72 (135)
                      ++.+.++... +      ..++|+|+++.+|..+++...    ..+...++.++.|++.|++|||+++|+||||||.|++
T Consensus        73 iv~L~dv~~~~~~~~~~~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlL  152 (323)
T KOG0594|consen   73 IVRLHDVIHTSNNHRGIGKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLL  152 (323)
T ss_pred             eEEEEeeeeecccccccceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEE
Confidence            6666666632 2      578999999999999998744    6788999999999999999999999999999999999


Q ss_pred             eecCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           73 ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        73 ~~~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ++ +.+.+|+ +|||+++...-+.......+.|..|.|||++.+...++...|+||+|||++
T Consensus       153 i~-~~G~lKl-aDFGlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfa  212 (323)
T KOG0594|consen  153 IS-SSGVLKL-ADFGLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFA  212 (323)
T ss_pred             EC-CCCcEee-eccchHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHH
Confidence            99 6899999 899999988877777888899999999999999987999999999999985

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=100.00  E-value=6.5e-34  Score=186.36  Aligned_cols=131  Identities=32%  Similarity=0.550  Sum_probs=119.7

Q ss_pred             ccchhhhccceec---ceeEEEeccCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC
Q 043346            2 QEMMKSMSLWVHK---RENLVFEYVNINLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN   77 (135)
Q Consensus         2 ~~~~~~~~~~~~~---~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~   77 (135)
                      +||+.+.+.....   ..|+|||||+-+|.+.++. ..++...+++.+..|++.|++|||.+.|+||||||+|+++. ..
T Consensus       135 ~NIV~vkEVVvG~~~d~iy~VMe~~EhDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~-~~  213 (419)
T KOG0663|consen  135 PNIVEVKEVVVGSNMDKIYIVMEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLS-HK  213 (419)
T ss_pred             CCeeeeEEEEeccccceeeeeHHHHHhhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeec-cC
Confidence            4677777776443   7899999999999999987 45899999999999999999999999999999999999999 78


Q ss_pred             CeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           78 KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      |.+|+ +|||+|+.+..+....+..+.|..|.|||.++|.+.++.+.|+||+|||+.
T Consensus       214 G~lKi-aDFGLAR~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~a  269 (419)
T KOG0663|consen  214 GILKI-ADFGLAREYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFA  269 (419)
T ss_pred             CcEEe-cccchhhhhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHH
Confidence            99999 899999999999888888899999999999999988999999999999985

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=9.5e-33  Score=183.17  Aligned_cols=131  Identities=24%  Similarity=0.447  Sum_probs=109.4

Q ss_pred             ccchhhhccc-eec--ceeEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecC
Q 043346            2 QEMMKSMSLW-VHK--RENLVFEYV-NINLHKFIQQYH-PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE   76 (135)
Q Consensus         2 ~~~~~~~~~~-~~~--~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~   76 (135)
                      +|||+.++.. ...  .++++|||+ +|+|.+++.+.+ ++++..+..+..|++.|++|||++|++|+||||+||+++..
T Consensus        74 p~IV~~~G~~~~~~~~~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~  153 (313)
T KOG0198|consen   74 PNIVQYYGSSSSRENDEYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPS  153 (313)
T ss_pred             CCEEeeCCccccccCeeeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCC
Confidence            4677777763 222  488999999 579999999866 79999999999999999999999999999999999999943


Q ss_pred             CCeeEEecccccccccCC---CCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhh
Q 043346           77 NKTVKIAADSGMAKEIDA---PFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLL  133 (135)
Q Consensus        77 ~~~~~i~~d~~~~~~~~~---~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il  133 (135)
                      ++.+|+ +|||++.....   .........||+.|||||++.++....+++|+||+||++
T Consensus       154 ~~~~Kl-aDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtV  212 (313)
T KOG0198|consen  154 NGDVKL-ADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTV  212 (313)
T ss_pred             CCeEEe-ccCccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEE
Confidence            789999 89999987763   122345688999999999998543344689999999986

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-33  Score=197.97  Aligned_cols=125  Identities=27%  Similarity=0.318  Sum_probs=110.6

Q ss_pred             hhhccc-eecceeEEEeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEe
Q 043346            6 KSMSLW-VHKRENLVFEYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIA   83 (135)
Q Consensus         6 ~~~~~~-~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~   83 (135)
                      .+++.| ++.+.|+||||++| + ..++.+.+.+++..+..++..++.||+|||++||++||||.+||+++ ..|.+|| 
T Consensus       433 ~L~~~fQT~~~l~fvmey~~Ggd-m~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD-~eGh~ki-  509 (694)
T KOG0694|consen  433 NLFSCFQTKEHLFFVMEYVAGGD-LMHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLD-TEGHVKI-  509 (694)
T ss_pred             ecccccccCCeEEEEEEecCCCc-EEEEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEc-ccCcEEe-
Confidence            444444 67799999999965 7 33334447899999999999999999999999999999999999999 7799999 


Q ss_pred             cccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           84 ADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        84 ~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +|||+++.........++++|||.|+|||++.+.. ++.++|+|||||++|
T Consensus       510 ADFGlcKe~m~~g~~TsTfCGTpey~aPEil~e~~-Yt~aVDWW~lGVLly  559 (694)
T KOG0694|consen  510 ADFGLCKEGMGQGDRTSTFCGTPEFLAPEVLTEQS-YTRAVDWWGLGVLLY  559 (694)
T ss_pred             cccccccccCCCCCccccccCChhhcChhhhccCc-ccchhhHHHHHHHHH
Confidence            89999998876767889999999999999999887 899999999999998

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4e-33  Score=192.04  Aligned_cols=128  Identities=23%  Similarity=0.399  Sum_probs=113.9

Q ss_pred             ccchhhhccc-eecceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLW-VHKRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~-~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|+|..++.+ ..+..|.||||++ |+|.+.+.+ -.+++.++..++++++.||+|||.+||+|||||.+||+++ ..+.
T Consensus       330 ~NiVnfl~Sylv~deLWVVMEym~ggsLTDvVt~-~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~-~~g~  407 (550)
T KOG0578|consen  330 PNIVNFLDSYLVGDELWVVMEYMEGGSLTDVVTK-TRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLT-MDGS  407 (550)
T ss_pred             hHHHHHHHHhcccceeEEEEeecCCCchhhhhhc-ccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEec-cCCc
Confidence            3677776555 5668999999996 599988877 4589999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLL  133 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il  133 (135)
                      +|+ .|||+++.+........+.+|||.|||||+...+. +++++||||||+++
T Consensus       408 vKl-tDFGFcaqi~~~~~KR~TmVGTPYWMAPEVvtrk~-YG~KVDIWSLGIMa  459 (550)
T KOG0578|consen  408 VKL-TDFGFCAQISEEQSKRSTMVGTPYWMAPEVVTRKP-YGPKVDIWSLGIMA  459 (550)
T ss_pred             EEE-eeeeeeeccccccCccccccCCCCccchhhhhhcc-cCccccchhhhhHH
Confidence            999 79999999877766778889999999999998877 89999999999875

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=100.00  E-value=7.2e-33  Score=189.90  Aligned_cols=129  Identities=21%  Similarity=0.346  Sum_probs=110.1

Q ss_pred             cchhhh-ccceecceeEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            3 EMMKSM-SLWVHKRENLVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         3 ~~~~~~-~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      .+||++ +|....+.||||||+ +|++..++.+.+.++++.+..++.+++.|++-+|+.|++||||||+|++++ ..|++
T Consensus       202 ~vVKLyYsFQD~~~LYLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD-~~GHi  280 (550)
T KOG0605|consen  202 WVVKLYYSFQDKEYLYLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLID-AKGHI  280 (550)
T ss_pred             cEEEEEEEecCCCeeEEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeec-CCCCE
Confidence            467774 444555999999999 469999999999999999999999999999999999999999999999999 78999


Q ss_pred             EEecccccccccCC-------------------------CC-----C-----------------CCCCCcccccccCccc
Q 043346           81 KIAADSGMAKEIDA-------------------------PF-----D-----------------AHTTEMVILRYRAPKI  113 (135)
Q Consensus        81 ~i~~d~~~~~~~~~-------------------------~~-----~-----------------~~~~~~~~~~~~ape~  113 (135)
                      |+ .|||++..+..                         +.     .                 .....+|||-|+|||+
T Consensus       281 KL-SDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEV  359 (550)
T KOG0605|consen  281 KL-SDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEV  359 (550)
T ss_pred             ee-ccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHH
Confidence            99 89999853210                         00     0                 1123589999999999


Q ss_pred             ccCCCCCCchhHHHHhhhhhh
Q 043346          114 LFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus       114 ~~~~~~~~~~~D~wslg~il~  134 (135)
                      +.+.. ++..+|+||||||+|
T Consensus       360 ll~kg-Y~~~cDwWSLG~Imy  379 (550)
T KOG0605|consen  360 LLGKG-YGKECDWWSLGCIMY  379 (550)
T ss_pred             HhcCC-CCccccHHHHHHHHH
Confidence            99988 889999999999998

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=100.00  E-value=7.1e-33  Score=191.88  Aligned_cols=130  Identities=21%  Similarity=0.373  Sum_probs=120.8

Q ss_pred             ccchhhhccce-ecceeEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            2 QEMMKSMSLWV-HKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         2 ~~~~~~~~~~~-~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      .||+..+++|+ ..+.|+|.||+.|+|..++...+.++++.+..++.+++.|+.|||+.+|.|||+||.||+++ .++.+
T Consensus        61 pniv~m~esfEt~~~~~vVte~a~g~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~-~~~~~  139 (808)
T KOG0597|consen   61 PNIVEMLESFETSAHLWVVTEYAVGDLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLE-KGGTL  139 (808)
T ss_pred             cchhhHHHhhcccceEEEEehhhhhhHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeec-CCCce
Confidence            47888888885 44999999999999999999999999999999999999999999999999999999999999 88999


Q ss_pred             EEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           81 KIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      |+ +|||+++.+..+..-.+...|||.|||||+..+.+ ++..+|+||+||++|
T Consensus       140 Kl-cdFg~Ar~m~~~t~vltsikGtPlYmAPElv~e~p-yd~~sDlWslGcilY  191 (808)
T KOG0597|consen  140 KL-CDFGLARAMSTNTSVLTSIKGTPLYMAPELVEEQP-YDHTSDLWSLGCILY  191 (808)
T ss_pred             ee-chhhhhhhcccCceeeeeccCcccccCHHHHcCCC-ccchhhHHHHHHHHH
Confidence            99 99999999888877778889999999999999777 788899999999998

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-32  Score=186.12  Aligned_cols=132  Identities=25%  Similarity=0.365  Sum_probs=114.3

Q ss_pred             ccchhhhccceecc--eeEEEecc-CCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCCcceeeec
Q 043346            2 QEMMKSMSLWVHKR--ENLVFEYV-NINLHKFIQQ--YHPMDSHLIKKFLYCILSGISYCHARK-IIHRDLTTMNLLADI   75 (135)
Q Consensus         2 ~~~~~~~~~~~~~~--~~lv~e~~-~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~-i~h~dl~~~nil~~~   75 (135)
                      .|||+++++..++.  ..+||||+ +|+|.+++.+  +..++...+..++.||+.||+|||+++ |+||||||+|++++.
T Consensus        99 pNIV~f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~  178 (362)
T KOG0192|consen   99 PNIVQFYGACTSPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDL  178 (362)
T ss_pred             CCeeeEEEEEcCCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcC
Confidence            48999999998774  88999999 5799999987  678999999999999999999999999 999999999999993


Q ss_pred             CCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCC-CCCCchhHHHHhhhhhh
Q 043346           76 ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGR-TNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        76 ~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~~D~wslg~il~  134 (135)
                      ....+|+ +|||+++.........+...||..|||||++.+. ..++.++|+||||++++
T Consensus       179 ~~~~~KI-~DFGlsr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlW  237 (362)
T KOG0192|consen  179 KGKTLKI-ADFGLSREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLW  237 (362)
T ss_pred             CCCEEEE-CCCccceeeccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHH
Confidence            3349999 8999998765543344447899999999999852 34889999999999986

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.98  E-value=4.2e-32  Score=173.06  Aligned_cols=131  Identities=34%  Similarity=0.620  Sum_probs=118.8

Q ss_pred             ccchhhhccceec-ceeEEEeccCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNINLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      +||+++.+.+.+. ...+|+||++.+|...++. ...+++..+..++.+++.|++|||++.|.|||+||.|++++ .++.
T Consensus        61 ~nIi~LiD~F~~~~~l~lVfEfm~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis-~~g~  139 (318)
T KOG0659|consen   61 PNIIELIDVFPHKSNLSLVFEFMPTDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLIS-SDGQ  139 (318)
T ss_pred             cchhhhhhhccCCCceEEEEEeccccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEc-CCCc
Confidence            5788999999655 7889999999999999986 45789999999999999999999999999999999999999 7899


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +|+ +|||+++.+.++.......+-|..|.|||.+.|...++..+|+||.||+++
T Consensus       140 lKi-ADFGLAr~f~~p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~A  193 (318)
T KOG0659|consen  140 LKI-ADFGLARFFGSPNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFA  193 (318)
T ss_pred             EEe-ecccchhccCCCCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHH
Confidence            999 899999999877665555578899999999999888999999999999985

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.97  E-value=1.6e-32  Score=186.51  Aligned_cols=132  Identities=26%  Similarity=0.367  Sum_probs=107.0

Q ss_pred             ccchhhhccceec---ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC
Q 043346            2 QEMMKSMSLWVHK---RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN   77 (135)
Q Consensus         2 ~~~~~~~~~~~~~---~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~   77 (135)
                      .|||++++...+.   +.|+|+|||+ |.+..--.....+++.+++.++.+++.||+|||.+||+||||||+|++++ +.
T Consensus       168 ~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~-~~  246 (576)
T KOG0585|consen  168 PNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLS-SD  246 (576)
T ss_pred             cCeeEEEEeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEc-CC
Confidence            4788888888554   8999999995 45433222222389999999999999999999999999999999999999 66


Q ss_pred             CeeEEecccccccccCC-----CCCCCCCCcccccccCcccccC---CCCCCchhHHHHhhhhhhC
Q 043346           78 KTVKIAADSGMAKEIDA-----PFDAHTTEMVILRYRAPKILFG---RTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~-----~~~~~~~~~~~~~~~ape~~~~---~~~~~~~~D~wslg~il~~  135 (135)
                      +.+|| +|||.+.....     .........|||.|+|||++.+   ....+.+.|+||+||+||+
T Consensus       247 g~VKI-sDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYC  311 (576)
T KOG0585|consen  247 GTVKI-SDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYC  311 (576)
T ss_pred             CcEEe-eccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHH
Confidence            99999 89999987622     2223344689999999999977   3446789999999999985

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=9.7e-32  Score=185.13  Aligned_cols=132  Identities=27%  Similarity=0.453  Sum_probs=120.0

Q ss_pred             ccchhhhccc-eecceeEEEeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLW-VHKRENLVFEYVN-INLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~-~~~~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      .||+++|+.. ++.+.|+|.|.-+ |+|++|+.++ .++.++...+++.||+.|+.|||+..++||||||+|+++..+-|
T Consensus        77 pNiVRLYEViDTQTKlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlG  156 (864)
T KOG4717|consen   77 PNIVRLYEVIDTQTKLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLG  156 (864)
T ss_pred             cCeeeeeehhcccceEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecC
Confidence            4899999998 6669999999885 6999999874 58999999999999999999999999999999999999987889


Q ss_pred             eeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           79 TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      .+|+ .|||++..+.+. ....+.+|+..|.|||+++|..+..+++|+||||||||+
T Consensus       157 lVKL-TDFGFSNkf~PG-~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyM  211 (864)
T KOG4717|consen  157 LVKL-TDFGFSNKFQPG-KKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYM  211 (864)
T ss_pred             ceEe-eeccccccCCCc-chhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHH
Confidence            9999 899999888665 556778999999999999999988999999999999995

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.97  E-value=9.7e-32  Score=181.48  Aligned_cols=130  Identities=24%  Similarity=0.277  Sum_probs=110.2

Q ss_pred             cchhhhccce-ecceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            3 EMMKSMSLWV-HKRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         3 ~~~~~~~~~~-~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      |+++....+. ++..|+||||+. ++|.+++.+++.+++..+..++.|++.|++|||++|++||||||+||+++ ..+.+
T Consensus        56 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~-~~~~~  134 (323)
T cd05571          56 FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLD-KDGHI  134 (323)
T ss_pred             CCCCEEEEEEcCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEEC-CCCCE
Confidence            5666666554 447899999995 69999998888899999999999999999999999999999999999999 67889


Q ss_pred             EEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           81 KIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ++ +|||++..............|++.|+|||++.+.. ++.++|+||+||++|+
T Consensus       135 kl-~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~e  187 (323)
T cd05571         135 KI-TDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDND-YGRAVDWWGLGVVMYE  187 (323)
T ss_pred             EE-eeCCCCcccccCCCcccceecCccccChhhhcCCC-CCccccCcccchhhhh
Confidence            99 79999875433333445567899999999997766 6889999999999984

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.97  E-value=1.8e-31  Score=182.65  Aligned_cols=130  Identities=18%  Similarity=0.277  Sum_probs=108.5

Q ss_pred             cchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            3 EMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         3 ~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      ++++.+..+.++ ..|+||||+. ++|.+++.+.+.+++..+..++.|++.|++|||++|++||||||+||+++ ..+.+
T Consensus        62 ~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~-~~~~v  140 (363)
T cd05628          62 WVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLD-SKGHV  140 (363)
T ss_pred             CcceEEEEEecCCeEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEEC-CCCCE
Confidence            566666666544 7899999995 69999999888999999999999999999999999999999999999999 67889


Q ss_pred             EEecccccccccCCCCC-----------------------------------CCCCCcccccccCcccccCCCCCCchhH
Q 043346           81 KIAADSGMAKEIDAPFD-----------------------------------AHTTEMVILRYRAPKILFGRTNCFAAID  125 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~~-----------------------------------~~~~~~~~~~~~ape~~~~~~~~~~~~D  125 (135)
                      ++ +|||++........                                   ......||+.|+|||++.+.. ++.++|
T Consensus       141 kL-~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~-~~~~~D  218 (363)
T cd05628         141 KL-SDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTG-YNKLCD  218 (363)
T ss_pred             EE-eeccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCC-CCCchh
Confidence            99 89999875432100                                   012457899999999998766 778999


Q ss_pred             HHHhhhhhhC
Q 043346          126 MWAVLYLLRW  135 (135)
Q Consensus       126 ~wslg~il~~  135 (135)
                      +||+||++|.
T Consensus       219 vwSlGvil~e  228 (363)
T cd05628         219 WWSLGVIMYE  228 (363)
T ss_pred             hhhhHHHHHH
Confidence            9999999973

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=1.1e-31  Score=181.54  Aligned_cols=131  Identities=19%  Similarity=0.237  Sum_probs=110.4

Q ss_pred             cchhhhccce-ecceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            3 EMMKSMSLWV-HKRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         3 ~~~~~~~~~~-~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      +++++...+. ++..|+||||+. ++|.+++.+++.+++..+..++.|++.|++|||+++++||||||+||+++ .++.+
T Consensus        57 ~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~-~~~~~  135 (330)
T cd05586          57 FIVGLKFSFQTDSDLYLVTDYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLD-ATGHI  135 (330)
T ss_pred             cCcceEEEEecCCeEEEEEcCCCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEEC-CCCCE
Confidence            4556655554 347899999995 69999998888899999999999999999999999999999999999999 67889


Q ss_pred             EEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           81 KIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ++ +|||++..............||+.|+|||++.+...++.++|+||+||++|.
T Consensus       136 kl-~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~e  189 (330)
T cd05586         136 AL-CDFGLSKANLTDNKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFE  189 (330)
T ss_pred             EE-ecCCcCcCCCCCCCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEE
Confidence            99 7999987654433444566789999999999766557888999999999873

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.97  E-value=5.6e-31  Score=177.82  Aligned_cols=130  Identities=24%  Similarity=0.292  Sum_probs=110.0

Q ss_pred             cchhhhccce-ecceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            3 EMMKSMSLWV-HKRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         3 ~~~~~~~~~~-~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      |++++.+.+. ++..|+||||++ ++|..++.+++.+++..+..++.|++.|+.|||+++++||||||+||+++ .++.+
T Consensus        56 ~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~-~~~~~  134 (323)
T cd05595          56 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD-KDGHI  134 (323)
T ss_pred             CCcceeeEEecCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEc-CCCCE
Confidence            5677766664 447899999995 69999998878899999999999999999999999999999999999999 67889


Q ss_pred             EEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           81 KIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ++ +|||++..............+++.|+|||++.+.. ++.++|+||+||++|.
T Consensus       135 kL-~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlGvil~e  187 (323)
T cd05595         135 KI-TDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDND-YGRAVDWWGLGVVMYE  187 (323)
T ss_pred             Ee-cccHHhccccCCCCccccccCCcCcCCcccccCCC-CCchhchhhhHHHHHH
Confidence            99 89999876433333344567899999999997765 6889999999999973

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.97  E-value=3.2e-31  Score=178.97  Aligned_cols=131  Identities=24%  Similarity=0.269  Sum_probs=111.1

Q ss_pred             ccchhhhcccee-cceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVH-KRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~-~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|+++.++.+.+ +..++||||++ ++|..++.+++.+++..+..++.|++.|++|||++|++||||||+||+++ ..+.
T Consensus        56 p~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~-~~~~  134 (323)
T cd05575          56 PFLVGLHYSFQTADKLYFVLDYVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLD-SQGH  134 (323)
T ss_pred             CCCCCeeEEEEeCCEEEEEEcCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEEC-CCCc
Confidence            356777666644 47899999995 69999998888899999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||++..............|++.|+|||++.+.. ++.++|+|||||++|+
T Consensus       135 ~kl-~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslG~il~e  188 (323)
T cd05575         135 VVL-TDFGLCKEGIEHSKTTSTFCGTPEYLAPEVLRKQP-YDRTVDWWCLGAVLYE  188 (323)
T ss_pred             EEE-eccCCCcccccCCCccccccCChhhcChhhhcCCC-CCccccccccchhhhh
Confidence            999 89999875443333445567899999999998766 7788999999999974

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=2.3e-31  Score=194.89  Aligned_cols=125  Identities=18%  Similarity=0.322  Sum_probs=112.2

Q ss_pred             hccceecceeEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEeccc
Q 043346            8 MSLWVHKRENLVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADS   86 (135)
Q Consensus         8 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~   86 (135)
                      |.|..+++.|+||||+ +|+|...+.+.++++++.+.++...++.|+.-+|+.|++||||||+|++++ ..|++++ +||
T Consensus       142 yAFQD~~~LYlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld-~~GHikL-ADF  219 (1317)
T KOG0612|consen  142 YAFQDERYLYLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLD-KSGHIKL-ADF  219 (1317)
T ss_pred             HHhcCccceEEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEec-ccCcEee-ccc
Confidence            5666777999999999 679999999988999999999999999999999999999999999999999 7899999 999


Q ss_pred             ccccccC-CCCCCCCCCcccccccCccccc----CCCCCCchhHHHHhhhhhh
Q 043346           87 GMAKEID-APFDAHTTEMVILRYRAPKILF----GRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        87 ~~~~~~~-~~~~~~~~~~~~~~~~ape~~~----~~~~~~~~~D~wslg~il~  134 (135)
                      |.+-.+. ++.......+|||-|.+||++.    ++..+++.+|+||+||++|
T Consensus       220 GsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~Y  272 (1317)
T KOG0612|consen  220 GSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMY  272 (1317)
T ss_pred             hhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHH
Confidence            9998887 4445667889999999999993    2234899999999999998

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.97  E-value=4.7e-31  Score=177.71  Aligned_cols=130  Identities=29%  Similarity=0.348  Sum_probs=110.7

Q ss_pred             cchhhhcccee-cceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            3 EMMKSMSLWVH-KRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         3 ~~~~~~~~~~~-~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      |+++.++.+.. +..++||||++ ++|.+++...+.+++..+..++.|++.|+.|||+++++||||||+||+++ ..+.+
T Consensus        57 ~i~~~~~~~~~~~~~~lv~e~~~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~-~~~~~  135 (316)
T cd05592          57 FLTHLFCTFQTKEHLFFVMEYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLD-KDGHI  135 (316)
T ss_pred             CccceeeEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEEC-CCCCE
Confidence            56777766644 47899999995 69999998878899999999999999999999999999999999999999 67889


Q ss_pred             EEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           81 KIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ++ +|||++..............||+.|+|||.+.+.. ++.++|+||+||++|.
T Consensus       136 kL-~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslG~il~e  188 (316)
T cd05592         136 KI-ADFGMCKENMNGEGKASTFCGTPDYIAPEILKGQK-YNESVDWWSFGVLLYE  188 (316)
T ss_pred             EE-ccCcCCeECCCCCCccccccCCccccCHHHHcCCC-CCCcccchhHHHHHHH
Confidence            99 89999876544333445567899999999998766 6788999999999873

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=3e-31  Score=178.35  Aligned_cols=131  Identities=23%  Similarity=0.271  Sum_probs=111.3

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|+++....+.++ ..++||||++ ++|.+++...+.+++..+..++.|++.|+.|||+++++||||||+||+++ ..+.
T Consensus        53 ~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~-~~~~  131 (312)
T cd05585          53 PFIVPLKFSFQSPEKLYLVLAFINGGELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLD-YQGH  131 (312)
T ss_pred             CcEeceeeEEecCCeEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEEC-CCCc
Confidence            3677777666444 8899999995 69999998888899999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||++..............||+.|+|||++.+.. ++.++|+||+||++|+
T Consensus       132 ~kl-~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslGvil~e  185 (312)
T cd05585         132 IAL-CDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGHG-YTKAVDWWTLGVLLYE  185 (312)
T ss_pred             EEE-EECcccccCccCCCccccccCCcccCCHHHHcCCC-CCCccceechhHHHHH
Confidence            999 79999876543333344567899999999998766 6788999999999873

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.97  E-value=1.4e-31  Score=182.39  Aligned_cols=130  Identities=24%  Similarity=0.381  Sum_probs=115.6

Q ss_pred             ccchhhhccceec-c-eeEEEeccC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecC
Q 043346            2 QEMMKSMSLWVHK-R-ENLVFEYVN-INLHKFIQQY--HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE   76 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~-~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~   76 (135)
                      .|||...+.|.++ . .+++|+||+ |++.+.+++.  ..++++.+..++.|++.|++|||+++|+|||||+.||++. .
T Consensus        63 P~iv~y~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Niflt-k  141 (426)
T KOG0589|consen   63 PNIVEYKDSFEEDGQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLT-K  141 (426)
T ss_pred             CCeeeeccchhcCCceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhcc-c
Confidence            3677777788655 5 789999995 6999999863  4689999999999999999999999999999999999999 5


Q ss_pred             CCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           77 NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        77 ~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .+.+++ .|||+++..........+..|||.|++||++.+.+ +..++|+|||||++|
T Consensus       142 ~~~VkL-gDfGlaK~l~~~~~~a~tvvGTp~YmcPEil~d~p-Yn~KSDiWsLGC~~y  197 (426)
T KOG0589|consen  142 DKKVKL-GDFGLAKILNPEDSLASTVVGTPYYMCPEILSDIP-YNEKSDIWSLGCCLY  197 (426)
T ss_pred             cCceee-cchhhhhhcCCchhhhheecCCCcccCHHHhCCCC-CCccCcchhhcchHH
Confidence            566699 79999999988876888899999999999999888 889999999999997

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.97  E-value=8.5e-31  Score=175.39  Aligned_cols=132  Identities=33%  Similarity=0.590  Sum_probs=110.7

Q ss_pred             ccchhhhccceec-ceeEEEeccCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNINLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|+++..+++..+ ..++||||++++|.+++.+. +.+++..+..++.|++.|++|||+++++||||||+||+++ ..+.
T Consensus        63 ~niv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~-~~~~  141 (303)
T cd07869          63 ANIVLLHDIIHTKETLTLVFEYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLIS-DTGE  141 (303)
T ss_pred             CCcCeEEEEEecCCeEEEEEECCCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC-CCCC
Confidence            3677777776444 78999999999999988763 5789999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||++..............+++.|+|||++.+...++.++|+||+||++|+
T Consensus       142 ~kl-~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~  196 (303)
T cd07869         142 LKL-ADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVE  196 (303)
T ss_pred             EEE-CCCCcceeccCCCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHH
Confidence            999 8999987654443344456778999999998776657888999999999873

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.97  E-value=3.9e-31  Score=178.64  Aligned_cols=130  Identities=22%  Similarity=0.260  Sum_probs=110.3

Q ss_pred             cchhhhccce-ecceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            3 EMMKSMSLWV-HKRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         3 ~~~~~~~~~~-~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      |++++.+.+. ++..|++|||++ ++|.+++...+.+++..+..++.|++.|+.|||++|++||||||+||+++ ..+.+
T Consensus        57 ~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~-~~~~~  135 (325)
T cd05602          57 FLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLD-SQGHI  135 (325)
T ss_pred             CCCceeEEEEcCCeEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEC-CCCCE
Confidence            5667766664 447899999995 59999998878899999999999999999999999999999999999999 67889


Q ss_pred             EEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           81 KIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ++ +|||++..............|++.|+|||++.+.. ++.++|+||+||++|.
T Consensus       136 kl-~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~e  188 (325)
T cd05602         136 VL-TDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQP-YDRTVDWWCLGAVLYE  188 (325)
T ss_pred             EE-ccCCCCcccccCCCCcccccCCccccCHHHHcCCC-CCCccccccccHHHHH
Confidence            99 89999876544333445567899999999998765 7788999999999974

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.97  E-value=5e-31  Score=177.58  Aligned_cols=130  Identities=28%  Similarity=0.305  Sum_probs=110.0

Q ss_pred             cchhhhcccee-cceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            3 EMMKSMSLWVH-KRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         3 ~~~~~~~~~~~-~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      ++++.++.+.. +..|+||||+. ++|.+++.+++.+++..+..++.|++.|++|||+++++||||||+||+++ .++.+
T Consensus        57 ~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~-~~~~~  135 (316)
T cd05620          57 FLTHLYCTFQTKEHLFFVMEFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLD-RDGHI  135 (316)
T ss_pred             CccCeeEEEEeCCEEEEEECCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEC-CCCCE
Confidence            56667666644 47899999995 69999998878899999999999999999999999999999999999999 66789


Q ss_pred             EEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           81 KIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ++ +|||++..............|++.|+|||++.+.. ++.++|+||+||++|.
T Consensus       136 kl-~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslGvil~e  188 (316)
T cd05620         136 KI-ADFGMCKENVFGDNRASTFCGTPDYIAPEILQGLK-YTFSVDWWSFGVLLYE  188 (316)
T ss_pred             Ee-CccCCCeecccCCCceeccCCCcCccCHHHHcCCC-CCcccchhhhHHHHHH
Confidence            99 89999875433333345567899999999998766 7788999999999873

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.97  E-value=5.4e-31  Score=177.70  Aligned_cols=131  Identities=29%  Similarity=0.279  Sum_probs=111.1

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++++.+... ..|+||||++ ++|.+++.+...+++..+..++.|++.|+.|||+++++||||||+||+++ ..+.
T Consensus        56 ~~iv~~~~~~~~~~~~~iv~Ey~~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~-~~~~  134 (320)
T cd05590          56 PFLTQLYCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLD-HEGH  134 (320)
T ss_pred             CchhceeeEEEcCCEEEEEEcCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEEC-CCCc
Confidence            3677777776444 7899999995 69999998888899999999999999999999999999999999999999 6688


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||++..............|++.|+|||++.+.. ++.++|+||+|+++|.
T Consensus       135 ~kL-~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~e  188 (320)
T cd05590         135 CKL-ADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEML-YGPSVDWWAMGVLLYE  188 (320)
T ss_pred             EEE-eeCCCCeecCcCCCcccccccCccccCHHHHcCCC-CCCccchhhhHHHHHH
Confidence            999 79999876443333444567899999999997765 6788999999999873

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1.4e-31  Score=181.22  Aligned_cols=123  Identities=25%  Similarity=0.321  Sum_probs=111.4

Q ss_pred             hccceecceeEEEeccC-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEec
Q 043346            8 MSLWVHKRENLVFEYVN-INLHKFIQQYH--PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAA   84 (135)
Q Consensus         8 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~~   84 (135)
                      |.+.+.+..++|+..|| |+|.-++...+  .++++.+..++.+|++||++||.++|+.||+||+||+++ +.|+++| +
T Consensus       252 YAfeTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLD-d~GhvRI-S  329 (591)
T KOG0986|consen  252 YAFETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLD-DHGHVRI-S  329 (591)
T ss_pred             eeecCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeec-cCCCeEe-e
Confidence            56667789999999996 59998887744  899999999999999999999999999999999999999 8999999 8


Q ss_pred             ccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           85 DSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        85 d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      |+|++..+... ......+||..|||||++.+.. ++.++|+|||||++|
T Consensus       330 DLGLAvei~~g-~~~~~rvGT~GYMAPEvl~ne~-Y~~s~Dwf~lGCllY  377 (591)
T KOG0986|consen  330 DLGLAVEIPEG-KPIRGRVGTVGYMAPEVLQNEV-YDFSPDWFSLGCLLY  377 (591)
T ss_pred             ccceEEecCCC-CccccccCcccccCHHHHcCCc-ccCCccHHHHHhHHH
Confidence            99999988665 4556669999999999999888 888999999999998

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.97  E-value=2.2e-31  Score=182.34  Aligned_cols=131  Identities=25%  Similarity=0.360  Sum_probs=112.1

Q ss_pred             ccchhhhccceec-ceeEEEecc-CCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYV-NINLHKFIQQ--YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN   77 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~-~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~   77 (135)
                      .|+|+++...++. ..||||||+ .|+|.+|++.  ++.++..+.+.++.||++||+||.+++++||||..+|||++ ++
T Consensus       261 ~~lV~l~gV~~~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~-~~  339 (468)
T KOG0197|consen  261 EKLVKLYGVCTKQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVD-ED  339 (468)
T ss_pred             cCeEEEEEEEecCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeec-cC
Confidence            4789999999876 599999999 6899999987  55789999999999999999999999999999999999999 77


Q ss_pred             CeeEEecccccccccCCCCC-CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           78 KTVKIAADSGMAKEIDAPFD-AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ..+|| +|||+++...+... ......-...|.|||++.... ++.++|||||||+|+.
T Consensus       340 ~~vKI-sDFGLAr~~~d~~Y~~~~~~kfPIkWtAPEa~~~~~-FS~kSDVWSFGVlL~E  396 (468)
T KOG0197|consen  340 LVVKI-SDFGLARLIGDDEYTASEGGKFPIKWTAPEALNYGK-FSSKSDVWSFGVLLWE  396 (468)
T ss_pred             ceEEE-cccccccccCCCceeecCCCCCCceecCHHHHhhCC-cccccceeehhhhHHH
Confidence            89999 89999996554432 223333355799999998776 8899999999999873

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.97  E-value=5e-31  Score=178.41  Aligned_cols=130  Identities=25%  Similarity=0.292  Sum_probs=109.4

Q ss_pred             cchhhhccce-ecceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            3 EMMKSMSLWV-HKRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         3 ~~~~~~~~~~-~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      |++++...+. ++..++||||++ ++|..++...+.+++..+..++.|++.|++|||+++++||||||+||+++ ..+.+
T Consensus        56 ~iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~-~~~~~  134 (328)
T cd05593          56 FLTSLKYSFQTKDRLCFVMEYVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLD-KDGHI  134 (328)
T ss_pred             CCcceEEEEEcCCEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEEC-CCCcE
Confidence            5666666554 447899999995 69999998878899999999999999999999999999999999999999 67889


Q ss_pred             EEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           81 KIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ++ +|||++..............+++.|+|||++.+.. ++.++|+||+||++|+
T Consensus       135 kL-~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslGvil~e  187 (328)
T cd05593         135 KI-TDFGLCKEGITDAATMKTFCGTPEYLAPEVLEDND-YGRAVDWWGLGVVMYE  187 (328)
T ss_pred             EE-ecCcCCccCCCcccccccccCCcCccChhhhcCCC-CCccCCccccchHHHH
Confidence            99 79999875433333344567899999999997765 6788999999999974

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.97  E-value=4.6e-31  Score=178.30  Aligned_cols=130  Identities=24%  Similarity=0.287  Sum_probs=109.2

Q ss_pred             cchhhhccce-ecceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhh-CCcccCCCCCcceeeecCCCe
Q 043346            3 EMMKSMSLWV-HKRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHA-RKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         3 ~~~~~~~~~~-~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~~~nil~~~~~~~   79 (135)
                      |++++...+. ++..++||||++ ++|..++.....+++..+..++.|++.|+.|||+ ++++||||||+||+++ ..+.
T Consensus        56 ~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~-~~~~  134 (325)
T cd05594          56 FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLD-KDGH  134 (325)
T ss_pred             CCCceEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEEC-CCCC
Confidence            5666666654 447899999995 6999999887889999999999999999999997 7999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||++..............+++.|+|||++.+.. ++.++|+||+||++|+
T Consensus       135 ~kL-~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~e  188 (325)
T cd05594         135 IKI-TDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDND-YGRAVDWWGLGVVMYE  188 (325)
T ss_pred             EEE-ecCCCCeecCCCCcccccccCCcccCCHHHHccCC-CCCccccccccceeee
Confidence            999 79999875433333344567899999999997765 6789999999999874

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.97  E-value=4.5e-31  Score=178.36  Aligned_cols=131  Identities=24%  Similarity=0.280  Sum_probs=111.2

Q ss_pred             ccchhhhcccee-cceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVH-KRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~-~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++...+.. +..|+||||+. ++|..++.+.+.+++..+..++.|++.|+.|||++|++||||||+||+++ ..+.
T Consensus        56 p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~-~~~~  134 (325)
T cd05604          56 PFLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLD-SQGH  134 (325)
T ss_pred             CCCccEEEEEecCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEEC-CCCC
Confidence            367777666644 48899999995 69999998888899999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||++..............|++.|+|||++.+.. ++.++|+||+||++|.
T Consensus       135 ~kL-~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslG~il~e  188 (325)
T cd05604         135 VVL-TDFGLCKEGIAQSDTTTTFCGTPEYLAPEVIRKQP-YDNTVDWWCLGAVLYE  188 (325)
T ss_pred             EEE-eecCCcccCCCCCCCcccccCChhhCCHHHHcCCC-CCCcCccccccceehh
Confidence            999 89999875443333445567899999999998766 6788999999999874

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.97  E-value=2.1e-31  Score=186.04  Aligned_cols=127  Identities=26%  Similarity=0.429  Sum_probs=111.3

Q ss_pred             cchhhhccce-ecceeEEEeccCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeee-cCCC
Q 043346            3 EMMKSMSLWV-HKRENLVFEYVNINLHKFIQQYH--PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD-IENK   78 (135)
Q Consensus         3 ~~~~~~~~~~-~~~~~lv~e~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~-~~~~   78 (135)
                      |+|+.++++. +++.|+|+|.++.+|.++++.+.  +++...+..++.||+.||.+||+.+|+|+||||+||++. ....
T Consensus       249 n~Vrm~d~F~fr~HlciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~  328 (586)
T KOG0667|consen  249 NIVRMLDYFYFRNHLCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRS  328 (586)
T ss_pred             eEEEeeeccccccceeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcC
Confidence            6788888884 45999999999999999999854  789999999999999999999999999999999999987 3445


Q ss_pred             eeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           79 TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .+|+ +|||.+.......   .+...+..|.|||+++|.+ ++.+.||||||||++
T Consensus       329 ~vKV-IDFGSSc~~~q~v---ytYiQSRfYRAPEVILGlp-Y~~~IDmWSLGCIlA  379 (586)
T KOG0667|consen  329 RIKV-IDFGSSCFESQRV---YTYIQSRFYRAPEVILGLP-YDTAIDMWSLGCILA  379 (586)
T ss_pred             ceeE-EecccccccCCcc---eeeeeccccccchhhccCC-CCCccceeehhhhHH
Confidence            7899 7999998654442   2677888999999999998 788999999999986

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.97  E-value=5.7e-31  Score=178.16  Aligned_cols=131  Identities=28%  Similarity=0.319  Sum_probs=111.2

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++.+.+..+ ..|+||||++ ++|.+++.+.+.+++..+..++.|++.|+.|||+++++||||||+||+++ ..+.
T Consensus        56 p~Iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~-~~~~  134 (329)
T cd05588          56 PFLVGLHSCFQTESRLFFVIEFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLD-AEGH  134 (329)
T ss_pred             CCCCceEEEEEcCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEC-CCCC
Confidence            3677777777444 7899999995 69999998878899999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||++..............||+.|+|||++.+.. ++.++|+||+||++|+
T Consensus       135 ~kL-~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~~l~e  188 (329)
T cd05588         135 IKL-TDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGED-YGFSVDWWALGVLMFE  188 (329)
T ss_pred             EEE-CcCccccccccCCCccccccCCccccCHHHHcCCC-CCCccceechHHHHHH
Confidence            999 89999875433333445567899999999998766 6788999999999974

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.97  E-value=5.9e-31  Score=177.97  Aligned_cols=130  Identities=31%  Similarity=0.348  Sum_probs=109.9

Q ss_pred             cchhhhcccee-cceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            3 EMMKSMSLWVH-KRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         3 ~~~~~~~~~~~-~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      +++++.+.+.. +..|+||||+. ++|.+++.+.+.+++..+..++.|++.|++|||+++++||||||+||+++ ..+.+
T Consensus        57 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~-~~~~~  135 (327)
T cd05617          57 FLVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLD-ADGHI  135 (327)
T ss_pred             CEeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEe-CCCCE
Confidence            46666666644 47899999995 69999998878899999999999999999999999999999999999999 66889


Q ss_pred             EEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           81 KIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ++ +|||++..............||+.|+|||++.+.. ++.++|+||+|+++|+
T Consensus       136 kl-~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslGvil~e  188 (327)
T cd05617         136 KL-TDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEE-YGFSVDWWALGVLMFE  188 (327)
T ss_pred             EE-eccccceeccCCCCceecccCCcccCCHHHHCCCC-CCchheeehhHHHHHH
Confidence            99 89999875433333345567899999999998766 6789999999999974

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=8.4e-31  Score=174.65  Aligned_cols=128  Identities=22%  Similarity=0.312  Sum_probs=110.2

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|+++.++.+.++ ..+++|||+. ++|.+++.+.+.+++..+..++.|++.|++|||++|++|+||+|+||+++ ..+.
T Consensus        61 p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~-~~~~  139 (291)
T cd05612          61 PFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLD-KEGH  139 (291)
T ss_pred             CcHhhhHhhhccCCeEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEEC-CCCC
Confidence            4678888777554 7899999995 69999999888899999999999999999999999999999999999998 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||++......   .....+++.|+|||++.+.. .+.++|+|||||++|+
T Consensus       140 ~kl-~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~~  190 (291)
T cd05612         140 IKL-TDFGFAKKLRDR---TWTLCGTPEYLAPEVIQSKG-HNKAVDWWALGILIYE  190 (291)
T ss_pred             EEE-EecCcchhccCC---cccccCChhhcCHHHHcCCC-CCchhhHHHHHHHHHH
Confidence            999 799998765432   23456889999999997766 6789999999999974

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.97  E-value=1.2e-30  Score=173.57  Aligned_cols=132  Identities=36%  Similarity=0.659  Sum_probs=111.1

Q ss_pred             ccchhhhccceec-ceeEEEeccCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNINLHKFIQQYH-PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++++++... ..++|||+++++|.+++...+ .++...+..++.|++.|++|||+++++||||||+||+++ .++.
T Consensus        63 ~niv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~-~~~~  141 (288)
T cd07871          63 ANIVTLHDIIHTERCLTLVFEYLDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLIN-EKGE  141 (288)
T ss_pred             CCEeeEEEEEcCCCeEEEEEeCCCcCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC-CCCC
Confidence            4678887777444 788999999999999987643 578999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||++..............+++.|+|||++.+...++.++|+||+||++|+
T Consensus       142 ~kl-~DfG~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~  196 (288)
T cd07871         142 LKL-ADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYE  196 (288)
T ss_pred             EEE-CcCcceeeccCCCccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHH
Confidence            999 8999987655443444556778999999999776557889999999999873

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.97  E-value=6.8e-31  Score=177.18  Aligned_cols=131  Identities=24%  Similarity=0.278  Sum_probs=110.5

Q ss_pred             ccchhhhcccee-cceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVH-KRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~-~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|+++..+.+.+ +..|+||||++ ++|...+.+...+++..+..++.|++.|+.|||+.+++||||||+||+++ ..+.
T Consensus        56 ~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~-~~~~  134 (321)
T cd05603          56 PFLVGLHYSFQTAEKLYFVLDYVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLD-SQGH  134 (321)
T ss_pred             CCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEEC-CCCC
Confidence            367777766644 48899999995 59999988878899999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||++..............+++.|+|||.+.+.. ++.++|+||+||++|.
T Consensus       135 ~kl-~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~e  188 (321)
T cd05603         135 VVL-TDFGLCKEGVEPEETTSTFCGTPEYLAPEVLRKEP-YDRTVDWWCLGAVLYE  188 (321)
T ss_pred             EEE-ccCCCCccCCCCCCccccccCCcccCCHHHhcCCC-CCCcCcccccchhhhh
Confidence            999 89999875433333445567899999999997765 6788999999999974

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=2.5e-31  Score=175.12  Aligned_cols=130  Identities=32%  Similarity=0.545  Sum_probs=112.2

Q ss_pred             cchhhhcccee------cceeEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecC
Q 043346            3 EMMKSMSLWVH------KRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE   76 (135)
Q Consensus         3 ~~~~~~~~~~~------~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~   76 (135)
                      |++.+.+....      +..|+|+|+++.+|.+.++.+..++++.+..+++|++.|++|+|+.+++|||+||+|++++ .
T Consensus        82 NIi~l~di~~p~~~~~f~DvYiV~elMetDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n-~  160 (359)
T KOG0660|consen   82 NIIGLLDIFRPPSRDKFNDVYLVFELMETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLN-A  160 (359)
T ss_pred             CcceEEeecccccccccceeEEehhHHhhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeec-c
Confidence            55555555533      2689999999999999999977899999999999999999999999999999999999999 7


Q ss_pred             CCeeEEecccccccccCCC--CCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           77 NKTVKIAADSGMAKEIDAP--FDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        77 ~~~~~i~~d~~~~~~~~~~--~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +..+|+ +|||+++.....  ....+..+.|..|.|||++.....++.+.|+||+|||++
T Consensus       161 ~c~lKI-~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~A  219 (359)
T KOG0660|consen  161 DCDLKI-CDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILA  219 (359)
T ss_pred             CCCEEe-ccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHH
Confidence            788899 899999977532  223356778999999999988887999999999999985

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.97  E-value=6.7e-31  Score=177.25  Aligned_cols=130  Identities=28%  Similarity=0.257  Sum_probs=110.7

Q ss_pred             cchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            3 EMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         3 ~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      +++++++.+..+ ..|+||||++ ++|...+.+...+++..+..++.|++.|+.|||+++++||||||+||+++ ..+.+
T Consensus        57 ~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~-~~~~~  135 (321)
T cd05591          57 FLTALHCCFQTKDRLFFVMEYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLD-AEGHC  135 (321)
T ss_pred             CccceeeEEEcCCeEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC-CCCCE
Confidence            566777776544 7899999995 69999998878899999999999999999999999999999999999999 67889


Q ss_pred             EEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           81 KIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ++ +|||++..............+++.|+|||++.+.. ++.++|+||+|+++|.
T Consensus       136 kL-~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslG~il~e  188 (321)
T cd05591         136 KL-ADFGMCKEGILNGVTTTTFCGTPDYIAPEILQELE-YGPSVDWWALGVLMYE  188 (321)
T ss_pred             EE-eecccceecccCCccccccccCccccCHHHHcCCC-CCCccceechhHHHHH
Confidence            99 79999876544434445567899999999997765 7788999999999873

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.97  E-value=1e-30  Score=176.47  Aligned_cols=129  Identities=30%  Similarity=0.282  Sum_probs=108.4

Q ss_pred             chhhhccce-ecceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeE
Q 043346            4 MMKSMSLWV-HKRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVK   81 (135)
Q Consensus         4 ~~~~~~~~~-~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~   81 (135)
                      +++..+.+. ++..++||||++ ++|.+++...+.+++..+..++.|++.|+.|||+++++||||||+||+++ ..+.++
T Consensus        63 i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~-~~~~~k  141 (323)
T cd05616          63 LTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLD-SEGHIK  141 (323)
T ss_pred             EeeEEEEEecCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEEC-CCCcEE
Confidence            444545543 347889999995 69999998878899999999999999999999999999999999999999 678899


Q ss_pred             EecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           82 IAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        82 i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      + +|||++..............||+.|+|||++.+.. ++.++|+||+||++|.
T Consensus       142 L-~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlGvil~e  193 (323)
T cd05616         142 I-ADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQP-YGKSVDWWAFGVLLYE  193 (323)
T ss_pred             E-ccCCCceecCCCCCccccCCCChhhcCHHHhcCCC-CCCccchhchhHHHHH
Confidence            9 89999876543333445567899999999998766 7889999999999873

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.97  E-value=1.1e-30  Score=176.35  Aligned_cols=131  Identities=24%  Similarity=0.257  Sum_probs=111.0

Q ss_pred             ccchhhhcccee-cceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVH-KRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~-~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++++.+.. +..|++|||+. ++|.+++.+.+.+++..+..++.|++.|+.|||+++++||||||+||+++ ..+.
T Consensus        60 p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~-~~~~  138 (323)
T cd05584          60 PFIVDLIYAFQTGGKLYLILEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLD-AQGH  138 (323)
T ss_pred             CchhceeeEEecCCeEEEEEeCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC-CCCC
Confidence            367777777644 47899999995 59999998888899999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||++..............+++.|+|||++.+.. .+.++|+||||+++|.
T Consensus       139 ~kl-~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~e  192 (323)
T cd05584         139 VKL-TDFGLCKESIHEGTVTHTFCGTIEYMAPEILMRSG-HGKAVDWWSLGALMYD  192 (323)
T ss_pred             EEE-eeCcCCeecccCCCcccccCCCccccChhhccCCC-CCCcceecccHHHHHH
Confidence            999 79999875543333344567899999999997765 6788999999999973

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.97  E-value=2.6e-31  Score=170.83  Aligned_cols=130  Identities=22%  Similarity=0.400  Sum_probs=114.8

Q ss_pred             ccchhhhccceec-ceeEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .+|+++-++++.+ -.++|+|.| .|.|.+++.+.-.+++.....+++|+..|++|+|.++|+|||+||+||+++ ++..
T Consensus        83 P~II~l~D~yes~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILld-dn~~  161 (411)
T KOG0599|consen   83 PYIIDLQDVYESDAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLD-DNMN  161 (411)
T ss_pred             CcEEEeeeeccCcchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeec-cccc
Confidence            3678888888555 678999999 589999999988999999999999999999999999999999999999999 8899


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCccccc-----CCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILF-----GRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~-----~~~~~~~~~D~wslg~il~  134 (135)
                      +++ .|||++..+... ......+|||+|+|||.+.     +.++++..+|+||+||++|
T Consensus       162 i~i-sDFGFa~~l~~G-ekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImy  219 (411)
T KOG0599|consen  162 IKI-SDFGFACQLEPG-EKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMY  219 (411)
T ss_pred             eEE-eccceeeccCCc-hhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHH
Confidence            999 899999987665 4556779999999999983     3455788999999999987

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.97  E-value=7.8e-31  Score=178.23  Aligned_cols=128  Identities=23%  Similarity=0.284  Sum_probs=110.7

Q ss_pred             ccchhhhccceec-ceeEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|+++.++.+.++ ..|++|||+ +++|.+++.+++.+++..+..++.|++.|+.|||+++++||||||+||+++ ..+.
T Consensus        91 p~Iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~-~~~~  169 (340)
T PTZ00426         91 PFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLD-KDGF  169 (340)
T ss_pred             CCCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEEC-CCCC
Confidence            4678888777554 789999999 469999999888899999999999999999999999999999999999998 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||++......   .....||+.|+|||++.+.. .+.++|+||+||++|.
T Consensus       170 ikL-~DFG~a~~~~~~---~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlGvil~e  220 (340)
T PTZ00426        170 IKM-TDFGFAKVVDTR---TYTLCGTPEYIAPEILLNVG-HGKAADWWTLGIFIYE  220 (340)
T ss_pred             EEE-ecCCCCeecCCC---cceecCChhhcCHHHHhCCC-CCccccccchhhHHHH
Confidence            999 899998765332   23457899999999997765 6788999999999974

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.97  E-value=1e-30  Score=176.90  Aligned_cols=131  Identities=31%  Similarity=0.337  Sum_probs=111.2

Q ss_pred             ccchhhhcccee-cceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVH-KRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~-~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++.+.+.. +..++||||++ ++|..++.+.+.+++..+..++.|++.|+.|||+++++||||||+||+++ .++.
T Consensus        56 p~iv~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~-~~~~  134 (329)
T cd05618          56 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD-SEGH  134 (329)
T ss_pred             CcCCceeeEEEeCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEC-CCCC
Confidence            367777777644 48899999995 69999998878899999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||++..............||+.|+|||++.+.. ++.++|+||+|+++|.
T Consensus       135 ~kL-~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~e  188 (329)
T cd05618         135 IKL-TDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGED-YGFSVDWWALGVLMFE  188 (329)
T ss_pred             EEE-eeCCccccccCCCCccccccCCccccCHHHHcCCC-CCCccceecccHHHHH
Confidence            999 89999875433333344567899999999998766 6788999999999873

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.97  E-value=7.8e-32  Score=177.82  Aligned_cols=131  Identities=29%  Similarity=0.517  Sum_probs=114.0

Q ss_pred             ccchhhhccceec------ceeEEEeccCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcce
Q 043346            2 QEMMKSMSLWVHK------RENLVFEYVNINLHKFIQQ----YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNL   71 (135)
Q Consensus         2 ~~~~~~~~~~~~~------~~~lv~e~~~~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~ni   71 (135)
                      .||+++.-++...      ...+||||+..+|.+.++.    +.+++.-.++-+..|+.+|+.|||+.||+||||||.|+
T Consensus        77 pNIV~L~~~f~~~~~~d~~~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNl  156 (364)
T KOG0658|consen   77 PNIVRLLYFFSSSTESDEVYLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNL  156 (364)
T ss_pred             cCeeeEEEEEEecCCCchhHHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheE
Confidence            4778876555322      2348999999999999985    56788889999999999999999999999999999999


Q ss_pred             eeecCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           72 LADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        72 l~~~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +++.+.+.+|+ +|||.|+....+ .+..+...|..|.|||.+.|...++.+.|+||.||+++
T Consensus       157 LvD~~tg~LKi-cDFGSAK~L~~~-epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~a  217 (364)
T KOG0658|consen  157 LVDPDTGVLKI-CDFGSAKVLVKG-EPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMA  217 (364)
T ss_pred             EEcCCCCeEEe-ccCCcceeeccC-CCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHH
Confidence            99999999999 999999987655 44567788999999999999988999999999999985

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.97  E-value=1.7e-30  Score=175.49  Aligned_cols=129  Identities=30%  Similarity=0.296  Sum_probs=108.1

Q ss_pred             chhhhccce-ecceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeE
Q 043346            4 MMKSMSLWV-HKRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVK   81 (135)
Q Consensus         4 ~~~~~~~~~-~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~   81 (135)
                      +++..+.+. ++..|+||||++ ++|.+++...+.+++..+..++.|++.|+.|||+++++||||||+||+++ ..+.++
T Consensus        63 i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~-~~~~~k  141 (324)
T cd05587          63 LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLD-AEGHIK  141 (324)
T ss_pred             eeeeEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEc-CCCCEE
Confidence            445555553 447899999995 69999998878899999999999999999999999999999999999999 678899


Q ss_pred             EecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           82 IAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        82 i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      + +|||++..............|++.|+|||++.+.. ++.++|+||+||++|.
T Consensus       142 L-~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslGvil~e  193 (324)
T cd05587         142 I-ADFGMCKENIFGGKTTRTFCGTPDYIAPEIIAYQP-YGKSVDWWAFGVLLYE  193 (324)
T ss_pred             E-eecCcceecCCCCCceeeecCCccccChhhhcCCC-CCcccchhhhHHHHHH
Confidence            9 79999875433333344567899999999998776 6788999999999873

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.97  E-value=2.2e-30  Score=174.47  Aligned_cols=131  Identities=30%  Similarity=0.362  Sum_probs=110.4

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .++++.++.+..+ ..++||||++ ++|.+++.....+++..+..++.|++.|+.|||+++++||||||+||+++ ..+.
T Consensus        56 p~iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~-~~~~  134 (316)
T cd05619          56 PFLTHLYCTFQTKENLFFVMEYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLD-TDGH  134 (316)
T ss_pred             CcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEEC-CCCC
Confidence            3567777776444 7889999995 69999998877899999999999999999999999999999999999999 6678


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||++..............+|+.|+|||++.+.. ++.++|+||+||++|.
T Consensus       135 ~kl-~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslG~il~e  188 (316)
T cd05619         135 IKI-ADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQK-YNTSVDWWSFGVLLYE  188 (316)
T ss_pred             EEE-ccCCcceECCCCCCceeeecCCccccCHHHHcCCC-CCchhhhhhHHHHHHH
Confidence            999 89999875433323344567899999999998766 6889999999999973

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.97  E-value=1.3e-30  Score=176.51  Aligned_cols=131  Identities=20%  Similarity=0.286  Sum_probs=109.2

Q ss_pred             cchhhhccce-ecceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            3 EMMKSMSLWV-HKRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         3 ~~~~~~~~~~-~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      +++++...+. ++..+++|||+. ++|.+++.+++.+++..+..++.|++.|+.|||+++++||||||+||+++ ..+.+
T Consensus        66 ~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~-~~~~~  144 (332)
T cd05614          66 FLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLD-SEGHV  144 (332)
T ss_pred             CcccEEEEEecCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEEC-CCCCE
Confidence            4566665554 347889999995 69999998878899999999999999999999999999999999999999 66889


Q ss_pred             EEecccccccccCCCC-CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           81 KIAADSGMAKEIDAPF-DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ++ +|||++....... .......||+.|+|||++.+....+.++|+|||||++|.
T Consensus       145 kl-~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~e  199 (332)
T cd05614         145 VL-TDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFE  199 (332)
T ss_pred             EE-eeCcCCccccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhh
Confidence            99 8999987654332 223345789999999999876556788999999999974

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=9.4e-31  Score=179.90  Aligned_cols=131  Identities=18%  Similarity=0.293  Sum_probs=108.4

Q ss_pred             ccchhhhccceec-ceeEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++++.+.++ ..|+||||+ +++|.+++...+.+++..+..++.|++.|++|||+++++||||||+||+++ ..+.
T Consensus        61 p~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~-~~~~  139 (377)
T cd05629          61 PWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILID-RGGH  139 (377)
T ss_pred             CCcceEEEEEEcCCeeEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEC-CCCC
Confidence            3677787777554 789999999 569999998888899999999999999999999999999999999999998 6788


Q ss_pred             eEEecccccccccCCCCC-----------------------------------------------CCCCCcccccccCcc
Q 043346           80 VKIAADSGMAKEIDAPFD-----------------------------------------------AHTTEMVILRYRAPK  112 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~~ape  112 (135)
                      +++ +|||++..+.....                                               ......||+.|+|||
T Consensus       140 ~kl-~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  218 (377)
T cd05629         140 IKL-SDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPE  218 (377)
T ss_pred             EEE-eecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHH
Confidence            999 79999863211000                                               001246899999999


Q ss_pred             cccCCCCCCchhHHHHhhhhhhC
Q 043346          113 ILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus       113 ~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ++.+.. ++.++|+||+||++|+
T Consensus       219 ~~~~~~-~~~~~DiwSlGvil~e  240 (377)
T cd05629         219 IFLQQG-YGQECDWWSLGAIMFE  240 (377)
T ss_pred             HHccCC-CCCceeeEecchhhhh
Confidence            997765 7888999999999974

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.97  E-value=2.9e-30  Score=174.31  Aligned_cols=129  Identities=31%  Similarity=0.296  Sum_probs=108.5

Q ss_pred             chhhhccce-ecceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeE
Q 043346            4 MMKSMSLWV-HKRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVK   81 (135)
Q Consensus         4 ~~~~~~~~~-~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~   81 (135)
                      ++++...+. ++..|+||||++ ++|.+++.+.+.+++..+..++.|++.|+.|||+++++||||||+||+++ .++.++
T Consensus        63 i~~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~-~~~~ik  141 (323)
T cd05615          63 LTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLD-SEGHIK  141 (323)
T ss_pred             hhheeeEEecCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC-CCCCEE
Confidence            445555553 447899999995 69999998888899999999999999999999999999999999999999 678899


Q ss_pred             EecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           82 IAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        82 i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      + +|||++..............|++.|+|||++.+.. ++.++|+||+|+++|.
T Consensus       142 L-~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslGvil~e  193 (323)
T cd05615         142 I-ADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAYQP-YGKSVDWWAYGVLLYE  193 (323)
T ss_pred             E-eccccccccCCCCccccCccCCccccCHHHHcCCC-CCCccchhhhHHHHHH
Confidence            9 79999876543333344567899999999998766 7789999999999873

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.97  E-value=3.6e-31  Score=183.90  Aligned_cols=129  Identities=23%  Similarity=0.434  Sum_probs=119.1

Q ss_pred             ccchhhhccceec-ceeEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      +|||.+.+.+++. .+|+||||| .|-|.+.++...++++..++.+..+|+.|+.|||...|+|||||..||++. ....
T Consensus       172 ~NII~FkGVCtqsPcyCIiMEfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs-~~d~  250 (904)
T KOG4721|consen  172 PNIITFKGVCTQSPCYCIIMEFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILIS-YDDV  250 (904)
T ss_pred             cceeeEeeeecCCceeEEeeeccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEee-ccce
Confidence            5899999999877 778999999 589999999989999999999999999999999999999999999999999 7789


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +|| .|||-++..... .....|+||..|||||++.+.+ ...++|+|||||+|+
T Consensus       251 VKI-sDFGTS~e~~~~-STkMSFaGTVaWMAPEvIrneP-csEKVDIwSfGVVLW  302 (904)
T KOG4721|consen  251 VKI-SDFGTSKELSDK-STKMSFAGTVAWMAPEVIRNEP-CSEKVDIWSFGVVLW  302 (904)
T ss_pred             EEe-ccccchHhhhhh-hhhhhhhhhHhhhCHHHhhcCC-cccccceehhHHHHH
Confidence            999 899998877655 7788999999999999999887 788999999999985

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.97  E-value=2.7e-30  Score=174.16  Aligned_cols=131  Identities=33%  Similarity=0.317  Sum_probs=110.9

Q ss_pred             ccchhhhcccee-cceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVH-KRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~-~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++++.+.. +..|+||||++ ++|..++.+.+.+++..+..++.|++.|+.|||+++++|+||+|+||+++ .++.
T Consensus        56 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~-~~~~  134 (318)
T cd05570          56 PFLTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLD-SEGH  134 (318)
T ss_pred             CCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEEC-CCCc
Confidence            367777777644 47899999995 69999998878899999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||++..............+++.|+|||++.+.. ++.++|+||+||++|+
T Consensus       135 ~kl-~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~DiwslGvil~~  188 (318)
T cd05570         135 IKI-ADFGMCKEGILGGVTTSTFCGTPDYIAPEILSYQP-YGPAVDWWALGVLLYE  188 (318)
T ss_pred             EEe-cccCCCeecCcCCCcccceecCccccCHHHhcCCC-CCcchhhhhHHHHHHH
Confidence            999 89999875433333344557899999999998766 6789999999999873

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=9.7e-31  Score=179.02  Aligned_cols=131  Identities=17%  Similarity=0.266  Sum_probs=108.9

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++++.+.++ ..|+|||++. ++|.+++..++.+++..+..++.|++.|++|||+++++||||||+||+++ .++.
T Consensus        61 ~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~-~~~~  139 (364)
T cd05599          61 PWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLD-AKGH  139 (364)
T ss_pred             CCCcceEEEEEcCCeEEEEECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEEC-CCCC
Confidence            3677777777544 7899999994 69999998888899999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCC--------------------------------------CCCCCcccccccCcccccCCCCCC
Q 043346           80 VKIAADSGMAKEIDAPFD--------------------------------------AHTTEMVILRYRAPKILFGRTNCF  121 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~--------------------------------------~~~~~~~~~~~~ape~~~~~~~~~  121 (135)
                      +++ +|||++........                                      ......||+.|+|||++.+.. ++
T Consensus       140 ~kl-~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~  217 (364)
T cd05599         140 IKL-SDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTG-YN  217 (364)
T ss_pred             EEE-eecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCC-CC
Confidence            999 79999865432110                                      011346899999999997765 78


Q ss_pred             chhHHHHhhhhhhC
Q 043346          122 AAIDMWAVLYLLRW  135 (135)
Q Consensus       122 ~~~D~wslg~il~~  135 (135)
                      .++|+||+||++|.
T Consensus       218 ~~~DiwSlG~il~e  231 (364)
T cd05599         218 KECDWWSLGVIMYE  231 (364)
T ss_pred             CeeeeecchhHHHH
Confidence            89999999999973

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.97  E-value=1.3e-30  Score=178.28  Aligned_cols=130  Identities=17%  Similarity=0.284  Sum_probs=107.5

Q ss_pred             cchhhhcccee-cceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            3 EMMKSMSLWVH-KRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         3 ~~~~~~~~~~~-~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      ++++.+..+.+ +..|+||||+. ++|.+++.+.+.+++..+..++.|++.|++|||++|++||||||+||+++ ..+.+
T Consensus        62 ~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~-~~~~v  140 (360)
T cd05627          62 WVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLD-AKGHV  140 (360)
T ss_pred             CEeeEEEEEEcCCEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEEC-CCCCE
Confidence            45666665544 47899999995 69999998888899999999999999999999999999999999999998 67889


Q ss_pred             EEecccccccccCCCC-----------------------------------CCCCCCcccccccCcccccCCCCCCchhH
Q 043346           81 KIAADSGMAKEIDAPF-----------------------------------DAHTTEMVILRYRAPKILFGRTNCFAAID  125 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~ape~~~~~~~~~~~~D  125 (135)
                      ++ +|||++.......                                   .......||+.|+|||++.+.. ++.++|
T Consensus       141 kL-~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~-~~~~~D  218 (360)
T cd05627         141 KL-SDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTG-YNKLCD  218 (360)
T ss_pred             EE-eeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCC-CCCcce
Confidence            99 8999986442110                                   0112357899999999998766 778999


Q ss_pred             HHHhhhhhhC
Q 043346          126 MWAVLYLLRW  135 (135)
Q Consensus       126 ~wslg~il~~  135 (135)
                      +||+||++|.
T Consensus       219 iwSlGvilye  228 (360)
T cd05627         219 WWSLGVIMYE  228 (360)
T ss_pred             eccccceeee
Confidence            9999999874

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.97  E-value=1.2e-30  Score=179.23  Aligned_cols=130  Identities=19%  Similarity=0.284  Sum_probs=107.1

Q ss_pred             cchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            3 EMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         3 ~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      ++++.++.+.++ ..|+||||+. ++|.+++.+.+.+++..+..++.|++.|++|||+++++||||||+||+++ ..+.+
T Consensus        62 ~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~-~~~~i  140 (376)
T cd05598          62 WVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILID-RDGHI  140 (376)
T ss_pred             CcceEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEEC-CCCCE
Confidence            567777776544 8899999995 69999998888899999999999999999999999999999999999999 67889


Q ss_pred             EEecccccccccCCC-------------------------------------------CCCCCCCcccccccCcccccCC
Q 043346           81 KIAADSGMAKEIDAP-------------------------------------------FDAHTTEMVILRYRAPKILFGR  117 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~-------------------------------------------~~~~~~~~~~~~~~ape~~~~~  117 (135)
                      ++ +|||++..+...                                           ........||+.|+|||++.+.
T Consensus       141 kL-~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  219 (376)
T cd05598         141 KL-TDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRT  219 (376)
T ss_pred             EE-EeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCC
Confidence            99 799987432100                                           0001234789999999999776


Q ss_pred             CCCCchhHHHHhhhhhhC
Q 043346          118 TNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus       118 ~~~~~~~D~wslg~il~~  135 (135)
                      . ++.++|+||+||++|+
T Consensus       220 ~-~~~~~DiwSlGvilye  236 (376)
T cd05598         220 G-YTQLCDWWSVGVILYE  236 (376)
T ss_pred             C-CCcceeeeeccceeee
Confidence            6 6789999999999974

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.97  E-value=2.9e-30  Score=168.98  Aligned_cols=132  Identities=23%  Similarity=0.353  Sum_probs=109.6

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC--
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN--   77 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~--   77 (135)
                      +||+++++|++++ ++|+|||.++ |+|.+++.+...+++.++..+..+|+.||.|||.+||.|||+||+||+....+  
T Consensus       136 ~nilqLiefFEdd~~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~v  215 (463)
T KOG0607|consen  136 KNILQLIEFFEDDTRFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKV  215 (463)
T ss_pred             ccHHHHHHHhcccceEEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCc
Confidence            5899999999766 8999999995 69999999989999999999999999999999999999999999999987433  


Q ss_pred             CeeEEecccccccccCCC--CC-----CCCCCcccccccCcccc---cC-CCCCCchhHHHHhhhhhh
Q 043346           78 KTVKIAADSGMAKEIDAP--FD-----AHTTEMVILRYRAPKIL---FG-RTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~--~~-----~~~~~~~~~~~~ape~~---~~-~~~~~~~~D~wslg~il~  134 (135)
                      ..+|| +||.+...+...  ..     ...+.+|+..|||||+.   .+ ...+..++|.||||||+|
T Consensus       216 sPvKi-CDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlY  282 (463)
T KOG0607|consen  216 SPVKI-CDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILY  282 (463)
T ss_pred             Cceee-eccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHH
Confidence            35688 898777654322  11     23456888899999997   22 223778899999999998

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.97  E-value=1.4e-30  Score=179.25  Aligned_cols=131  Identities=18%  Similarity=0.273  Sum_probs=107.7

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .++++++..+.++ ..|+||||+. ++|.+++.+.+.+++..+..++.|++.|++|||+++++||||||+||+++ ..+.
T Consensus        61 ~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~-~~g~  139 (382)
T cd05625          61 EWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILID-RDGH  139 (382)
T ss_pred             CcCCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC-CCCC
Confidence            3577777777544 7899999995 69999998878899999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCC-----------------------------------------------CCCCCCCcccccccCcc
Q 043346           80 VKIAADSGMAKEIDAP-----------------------------------------------FDAHTTEMVILRYRAPK  112 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~~~~ape  112 (135)
                      +++ +|||++..+...                                               ........||+.|+|||
T Consensus       140 ~kL-~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE  218 (382)
T cd05625         140 IKL-TDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPE  218 (382)
T ss_pred             EEE-eECCCCccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHH
Confidence            999 899987532100                                               00012346899999999


Q ss_pred             cccCCCCCCchhHHHHhhhhhhC
Q 043346          113 ILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus       113 ~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ++.+.. ++.++|+||+||++|.
T Consensus       219 ~~~~~~-~~~~~DiwSlGvil~e  240 (382)
T cd05625         219 VLLRTG-YTQLCDWWSVGVILYE  240 (382)
T ss_pred             HhcCCC-CCCeeeEEechHHHHH
Confidence            998766 6789999999999973

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=3.2e-30  Score=174.68  Aligned_cols=128  Identities=21%  Similarity=0.335  Sum_probs=109.9

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|+++++..+.++ ..|+||||+. ++|.+++...+.+++..+..++.|++.|+.+||+++++|+||+|+||+++ ..+.
T Consensus        61 ~~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~-~~~~  139 (333)
T cd05600          61 EWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLID-ASGH  139 (333)
T ss_pred             CCCccEEEEEEcCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEC-CCCC
Confidence            3567777666544 7899999995 69999998878899999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||++.....   ......+++.|+|||++.+.. ++.++|+||+||++|.
T Consensus       140 ~kL-~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslG~il~e  190 (333)
T cd05600         140 IKL-TDFGLSKGIVT---YANSVVGSPDYMAPEVLRGKG-YDFTVDYWSLGCMLYE  190 (333)
T ss_pred             EEE-EeCcCCccccc---ccCCcccCccccChhHhcCCC-CCCccceecchHHHhh
Confidence            999 79999876543   234557899999999998775 7889999999999874

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.97  E-value=2.2e-30  Score=178.35  Aligned_cols=131  Identities=19%  Similarity=0.275  Sum_probs=108.0

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .++++++..+.++ ..++||||+. ++|.+++.+.+.+++..+..++.|++.|++|||+.+++||||||+||+++ ..+.
T Consensus        61 ~~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~-~~~~  139 (381)
T cd05626          61 EWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILID-LDGH  139 (381)
T ss_pred             CCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEEC-CCCC
Confidence            3577777777544 8899999994 69999998888899999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCC-----------------------------------------------CCCCCCcccccccCcc
Q 043346           80 VKIAADSGMAKEIDAPF-----------------------------------------------DAHTTEMVILRYRAPK  112 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~~~ape  112 (135)
                      +++ +|||++.......                                               .......||+.|+|||
T Consensus       140 ~kL-~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE  218 (381)
T cd05626         140 IKL-TDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPE  218 (381)
T ss_pred             EEE-eeCcCCcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHH
Confidence            999 8999875331000                                               0012357899999999


Q ss_pred             cccCCCCCCchhHHHHhhhhhhC
Q 043346          113 ILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus       113 ~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ++.+.. ++.++|+||+||++|+
T Consensus       219 ~~~~~~-~~~~~DiwSlG~il~e  240 (381)
T cd05626         219 VLLRKG-YTQLCDWWSVGVILFE  240 (381)
T ss_pred             HHcCCC-CCCccceeehhhHHHH
Confidence            997765 6788999999999974

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.97  E-value=4.9e-30  Score=173.23  Aligned_cols=129  Identities=27%  Similarity=0.344  Sum_probs=109.4

Q ss_pred             cchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            3 EMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         3 ~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      |+++.++.+..+ ..|+||||++ ++|...+.+ +.+++..+..++.|++.|++|||+++++||||||+||+++ ..+.+
T Consensus        63 ~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~-~~~~~  140 (324)
T cd05589          63 FLVNLFACFQTEDHVCFVMEYAAGGDLMMHIHT-DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLD-TEGFV  140 (324)
T ss_pred             ChhceeeEEEcCCEEEEEEcCCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEEC-CCCcE
Confidence            677787777544 7899999995 599888765 5799999999999999999999999999999999999999 67889


Q ss_pred             EEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           81 KIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ++ +|||++..............+++.|+|||.+.+.. ++.++|+|||||++|.
T Consensus       141 kL-~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~DiwslG~il~e  193 (324)
T cd05589         141 KI-ADFGLCKEGMGFGDRTSTFCGTPEFLAPEVLTETS-YTRAVDWWGLGVLIYE  193 (324)
T ss_pred             Ee-CcccCCccCCCCCCcccccccCccccCHhHhcCCC-CCcccchhhHHHHHHH
Confidence            99 89999875544334445677899999999998765 6788999999999873

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.97  E-value=2e-30  Score=175.53  Aligned_cols=128  Identities=25%  Similarity=0.353  Sum_probs=110.3

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|+++.++.+.++ ..+++|||+. ++|.+++.+.+.+++..+..++.|++.|++|||+++++|+||||+||+++ ..+.
T Consensus        78 p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~-~~~~  156 (329)
T PTZ00263         78 PFIVNMMCSFQDENRVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLD-NKGH  156 (329)
T ss_pred             CCCCcEEEEEEcCCEEEEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEC-CCCC
Confidence            4678888777544 8899999995 69999999888899999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||++......   .....|++.|+|||++.+.. .+.++|+|||||++|.
T Consensus       157 ~kl-~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~e  207 (329)
T PTZ00263        157 VKV-TDFGFAKKVPDR---TFTLCGTPEYLAPEVIQSKG-HGKAVDWWTMGVLLYE  207 (329)
T ss_pred             EEE-eeccCceEcCCC---cceecCChhhcCHHHHcCCC-CCCcceeechHHHHHH
Confidence            999 799998765432   23457899999999998776 6788999999999873

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=9.9e-30  Score=175.57  Aligned_cols=131  Identities=18%  Similarity=0.206  Sum_probs=111.4

Q ss_pred             ccchhhhccceec-ceeEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      .||+++.+.+..+ ..++++|++.++|.+++.....++...+..++.|++.||.|||+++++||||||+||+++ ..+.+
T Consensus       143 pnIv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~-~~~~v  221 (391)
T PHA03212        143 PSIIQLKGTFTYNKFTCLILPRYKTDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFIN-HPGDV  221 (391)
T ss_pred             CCCCCEeEEEEECCeeEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEc-CCCCE
Confidence            4788888877544 788999999999999998877899999999999999999999999999999999999999 66889


Q ss_pred             EEecccccccccCCC-CCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           81 KIAADSGMAKEIDAP-FDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~-~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ++ +|||++...... ........||+.|+|||++.+.. +++++|+||+||++|.
T Consensus       222 kL-~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlGvil~e  275 (391)
T PHA03212        222 CL-GDFGAACFPVDINANKYYGWAGTIATNAPELLARDP-YGPAVDIWSAGIVLFE  275 (391)
T ss_pred             EE-EeCCcccccccccccccccccCccCCCChhhhcCCC-CCcHHHHHHHHHHHHH
Confidence            99 799998654322 12234567899999999997765 7889999999999873

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.97  E-value=1.9e-30  Score=174.84  Aligned_cols=131  Identities=21%  Similarity=0.251  Sum_probs=111.8

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++++.+..+ ..|+||||++ ++|.+++.++..+++..+..++.|++.|+.|||+++++|+||+|+||+++ .++.
T Consensus        58 ~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~-~~~~  136 (318)
T cd05582          58 PFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLD-EEGH  136 (318)
T ss_pred             CCcccEEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEEC-CCCc
Confidence            4677887777444 8899999995 69999998878899999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||++..............+++.|+|||.+.+.. .+.++|+||+|+++|.
T Consensus       137 ~kL-~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~DiwslG~il~e  190 (318)
T cd05582         137 IKL-TDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRG-HTQSADWWSFGVLMFE  190 (318)
T ss_pred             EEE-eeccCCcccCCCCCceecccCChhhcCHHHHcCCC-CCCccceeccceEeee
Confidence            999 79999876544433444567899999999997765 6788999999999874

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=2.9e-30  Score=175.74  Aligned_cols=131  Identities=21%  Similarity=0.308  Sum_probs=111.7

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .++++++..+.++ ..++||||+. ++|.+++.+.+.+++..+..++.|++.|++|||++|++|+||||+||+++ ..+.
T Consensus        61 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~-~~~~  139 (350)
T cd05573          61 PWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILID-ADGH  139 (350)
T ss_pred             CCccchhhheecCCeEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC-CCCC
Confidence            3677777777544 7899999994 69999998888899999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCC-----------------------------CCCCCCcccccccCcccccCCCCCCchhHHHHhh
Q 043346           80 VKIAADSGMAKEIDAPF-----------------------------DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVL  130 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg  130 (135)
                      +++ +|||++.......                             .......+|+.|+|||++.+.. ++.++|+||||
T Consensus       140 ~kL-~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG  217 (350)
T cd05573         140 IKL-ADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTP-YGLECDWWSLG  217 (350)
T ss_pred             EEe-ecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCC-CCCceeeEecc
Confidence            999 7999987664432                             2234457899999999998775 78899999999


Q ss_pred             hhhhC
Q 043346          131 YLLRW  135 (135)
Q Consensus       131 ~il~~  135 (135)
                      |++|.
T Consensus       218 ~il~e  222 (350)
T cd05573         218 VILYE  222 (350)
T ss_pred             hhhhh
Confidence            99984

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=4.2e-30  Score=182.05  Aligned_cols=131  Identities=22%  Similarity=0.367  Sum_probs=116.7

Q ss_pred             ccchhhhccceec-ceeEEEecc-CCCHHHHHHh-cCCC--CHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYV-NINLHKFIQQ-YHPM--DSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE   76 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~-~~~L~~~~~~-~~~~--~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~   76 (135)
                      +||++..+...++ ..-++||.. +|+|.+.++. ++++  ++.++..+.+||+.|++|||++.|+|||||.+|++++..
T Consensus       632 kNIVrYLGs~senGf~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTy  711 (1226)
T KOG4279|consen  632 KNIVRYLGSVSENGFFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTY  711 (1226)
T ss_pred             HhHHHHhhccCCCCeEEEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeec
Confidence            5899998888776 455899998 5799999975 7777  899999999999999999999999999999999999999


Q ss_pred             CCeeEEecccccccccCCCCCCCCCCcccccccCcccccC-CCCCCchhHHHHhhhhh
Q 043346           77 NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFG-RTNCFAAIDMWAVLYLL  133 (135)
Q Consensus        77 ~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~~D~wslg~il  133 (135)
                      +|.+|| .|||-+++...-.....++.||..|||||++.. ..++++++|+|||||++
T Consensus       712 SGvlKI-SDFGTsKRLAginP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~  768 (1226)
T KOG4279|consen  712 SGVLKI-SDFGTSKRLAGINPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTM  768 (1226)
T ss_pred             cceEEe-cccccchhhccCCccccccccchhhhChHhhccCCcCCCchhhhhhcccee
Confidence            999999 899999988776677788999999999999954 45589999999999975

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=7.6e-30  Score=172.34  Aligned_cols=130  Identities=22%  Similarity=0.288  Sum_probs=111.4

Q ss_pred             ccchhhhccc-eecceeEEEeccC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC
Q 043346            2 QEMMKSMSLW-VHKRENLVFEYVN-INLHKFIQQ--YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN   77 (135)
Q Consensus         2 ~~~~~~~~~~-~~~~~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~   77 (135)
                      .||++.+..| .+...|+||.+|+ ||+.+.++.  ..++++..+..++++++.||.|||.+|.+|||+|+.||+++ ..
T Consensus        84 PNIv~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~-~d  162 (516)
T KOG0582|consen   84 PNIVTYHCSFVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILID-SD  162 (516)
T ss_pred             CCcceEEEEEEecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEc-CC
Confidence            4788887777 5558999999995 799999987  45799999999999999999999999999999999999999 78


Q ss_pred             CeeEEecccccccccCCCCCC---C-CCCcccccccCccc-ccCCCCCCchhHHHHhhhhh
Q 043346           78 KTVKIAADSGMAKEIDAPFDA---H-TTEMVILRYRAPKI-LFGRTNCFAAIDMWAVLYLL  133 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~~---~-~~~~~~~~~~ape~-~~~~~~~~~~~D~wslg~il  133 (135)
                      |.+++ +|||.+..+......   . ..+.+++.|||||+ .....+++.++|+||||++.
T Consensus       163 G~VkL-adFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA  222 (516)
T KOG0582|consen  163 GTVKL-ADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITA  222 (516)
T ss_pred             CcEEE-cCceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHH
Confidence            99999 899998877543222   2 56799999999999 45555689999999999864

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.96  E-value=1.5e-29  Score=171.35  Aligned_cols=131  Identities=26%  Similarity=0.426  Sum_probs=107.8

Q ss_pred             cchhhhcccee------cceeEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecC
Q 043346            3 EMMKSMSLWVH------KRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE   76 (135)
Q Consensus         3 ~~~~~~~~~~~------~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~   76 (135)
                      |++++.+++..      ...|++||+++++|.+++..+..+++..+..++.|++.|+.|||+++++||||||+||+++ .
T Consensus        60 niv~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~-~  138 (338)
T cd07859          60 DIVEIKHIMLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILAN-A  138 (338)
T ss_pred             CEeeecceEeccCCCCCceEEEEEecCCCCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC-C
Confidence            56666665532      2479999999999999998888899999999999999999999999999999999999999 6


Q ss_pred             CCeeEEecccccccccCCCCC---CCCCCcccccccCcccccCC-CCCCchhHHHHhhhhhhC
Q 043346           77 NKTVKIAADSGMAKEIDAPFD---AHTTEMVILRYRAPKILFGR-TNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        77 ~~~~~i~~d~~~~~~~~~~~~---~~~~~~~~~~~~ape~~~~~-~~~~~~~D~wslg~il~~  135 (135)
                      .+.+++ +|||++........   ......+++.|+|||++.+. ..++.++|+||+||++|.
T Consensus       139 ~~~~kL-~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~e  200 (338)
T cd07859         139 DCKLKI-CDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAE  200 (338)
T ss_pred             CCcEEE-ccCccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHH
Confidence            788999 89999876532211   22345789999999998652 336789999999999873

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.96  E-value=1.3e-29  Score=168.09  Aligned_cols=130  Identities=24%  Similarity=0.249  Sum_probs=107.3

Q ss_pred             cchhhhccce-ecceeEEEeccC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecC
Q 043346            3 EMMKSMSLWV-HKRENLVFEYVN-INLHKFIQQ----YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE   76 (135)
Q Consensus         3 ~~~~~~~~~~-~~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~   76 (135)
                      ++++....+. +...+++|||++ ++|.+++..    +..+++..+..++.|++.|++|||+++++|+||+|+||+++ .
T Consensus        54 ~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~-~  132 (280)
T cd05608          54 FIVSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLD-N  132 (280)
T ss_pred             cEeeeeEEEcCCCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC-C
Confidence            4566655553 447899999995 699887743    35689999999999999999999999999999999999998 6


Q ss_pred             CCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           77 NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        77 ~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ++.+++ +|||++..............+++.|+|||.+.+.. ++.++|+||+|+++|+
T Consensus       133 ~~~~~l-~dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~DvwslG~il~e  189 (280)
T cd05608         133 DGNVRI-SDLGLAVELKDGQSKTKGYAGTPGFMAPELLQGEE-YDFSVDYFALGVTLYE  189 (280)
T ss_pred             CCCEEE-eeCccceecCCCCccccccCCCcCccCHHHhcCCC-CCccccHHHHHHHHHH
Confidence            788899 79999877655444444567899999999998776 6788999999999874

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.96  E-value=6.8e-30  Score=162.09  Aligned_cols=130  Identities=26%  Similarity=0.348  Sum_probs=110.2

Q ss_pred             ccchhhhccce-ecceeEEEeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC--
Q 043346            2 QEMMKSMSLWV-HKRENLVFEYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN--   77 (135)
Q Consensus         2 ~~~~~~~~~~~-~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~--   77 (135)
                      .||+++.+... +...|+|+|.+.| +|..-+-+..-+++..+.++..|++.++.|||.++|+|||+||.|+++.++.  
T Consensus        70 P~IvrL~~ti~~~~~~ylvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~  149 (355)
T KOG0033|consen   70 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKG  149 (355)
T ss_pred             CcEeehhhhhcccceeEEEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCC
Confidence            36677766664 4478999999964 8877776656789999999999999999999999999999999999997433  


Q ss_pred             CeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           78 KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ..+|+ +|||++.... .......+.|||.|||||++...+ ++.++|+|+.||+||
T Consensus       150 A~vKL-~~FGvAi~l~-~g~~~~G~~GtP~fmaPEvvrkdp-y~kpvDiW~cGViLf  203 (355)
T KOG0033|consen  150 AAVKL-ADFGLAIEVN-DGEAWHGFAGTPGYLSPEVLKKDP-YSKPVDIWACGVILY  203 (355)
T ss_pred             Cceee-cccceEEEeC-CccccccccCCCcccCHHHhhcCC-CCCcchhhhhhHHHH
Confidence            46788 8999999887 446667889999999999998777 788899999999997

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.96  E-value=5.9e-30  Score=175.63  Aligned_cols=131  Identities=20%  Similarity=0.258  Sum_probs=108.6

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++++.+..+ ..|+||||+. ++|.+++.. ..+++..+..++.|++.|++|||+++++||||||+||+++ ..+.
T Consensus       103 p~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~-~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~-~~~~  180 (370)
T cd05621         103 PWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSN-YDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLD-KHGH  180 (370)
T ss_pred             CCEeeEEEEEEcCCEEEEEEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEC-CCCC
Confidence            4677777777544 7899999995 699999876 4689999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCC-CCCCCcccccccCcccccCCC---CCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFD-AHTTEMVILRYRAPKILFGRT---NCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~---~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||++........ ......||+.|+|||++.+..   .++.++|+||+||++|.
T Consensus       181 ~kL-~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilye  239 (370)
T cd05621         181 LKL-ADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFE  239 (370)
T ss_pred             EEE-EecccceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHH
Confidence            999 89999986643322 234567899999999996542   25678999999999973

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.96  E-value=3.2e-29  Score=175.35  Aligned_cols=131  Identities=28%  Similarity=0.505  Sum_probs=105.9

Q ss_pred             ccchhhhcccee---------cceeEEEeccCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCC
Q 043346            2 QEMMKSMSLWVH---------KRENLVFEYVNINLHKFIQQ----YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTT   68 (135)
Q Consensus         2 ~~~~~~~~~~~~---------~~~~lv~e~~~~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~   68 (135)
                      .|++++.+++..         ...++||||+++++.+++..    ...++...+..++.|++.||.|||+++++||||||
T Consensus       119 ~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp  198 (440)
T PTZ00036        119 INIIFLKDYYYTECFKKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKP  198 (440)
T ss_pred             CCCcceeeeEeecccccCCCceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCH
Confidence            356666555421         13568999999888887753    45789999999999999999999999999999999


Q ss_pred             cceeeecCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           69 MNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        69 ~nil~~~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +||+++...+.+++ +|||+++..... .......+++.|+|||++.+...++.++|+||+||++|
T Consensus       199 ~NILl~~~~~~vkL-~DFGla~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~  262 (440)
T PTZ00036        199 QNLLIDPNTHTLKL-CDFGSAKNLLAG-QRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIA  262 (440)
T ss_pred             HHEEEcCCCCceee-eccccchhccCC-CCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHH
Confidence            99999855567899 899999866443 22334577899999999987666788999999999987

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.96  E-value=1.9e-29  Score=167.80  Aligned_cols=130  Identities=26%  Similarity=0.531  Sum_probs=108.0

Q ss_pred             ccchhhhccce------ecceeEEEeccCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceee
Q 043346            2 QEMMKSMSLWV------HKRENLVFEYVNINLHKFIQQY--HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLA   73 (135)
Q Consensus         2 ~~~~~~~~~~~------~~~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~   73 (135)
                      .|++++++++.      +...+++||+++++|.+++...  ..+++..+..++.|++.|+.|||+++++|+||||+||++
T Consensus        64 pniv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~  143 (290)
T cd07862          64 PNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV  143 (290)
T ss_pred             CCcceEEEEEecccCCCCCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEE
Confidence            36677766552      2368899999999999999763  458999999999999999999999999999999999999


Q ss_pred             ecCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           74 DIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        74 ~~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      + ..+.+++ +|||++...... .......+++.|+|||.+.+.. ++.++|+||+||++|.
T Consensus       144 ~-~~~~~kl-~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~il~e  201 (290)
T cd07862         144 T-SSGQIKL-ADFGLARIYSFQ-MALTSVVVTLWYRAPEVLLQSS-YATPVDLWSVGCIFAE  201 (290)
T ss_pred             c-CCCCEEE-ccccceEeccCC-cccccccccccccChHHHhCCC-CCCccchHHHHHHHHH
Confidence            9 6788999 899998765433 3334556889999999997765 6788999999999873

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.96  E-value=3.5e-29  Score=176.68  Aligned_cols=130  Identities=23%  Similarity=0.358  Sum_probs=109.8

Q ss_pred             cchhhhccceec-ceeEEEecc-CCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecC
Q 043346            3 EMMKSMSLWVHK-RENLVFEYV-NINLHKFIQQ----YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE   76 (135)
Q Consensus         3 ~~~~~~~~~~~~-~~~lv~e~~-~~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~   76 (135)
                      |+++.++.+..+ ..|+||||+ +++|.+++..    ..++++..+..++.|++.||.|+|+++++||||||+||+++ .
T Consensus       126 niv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~  204 (478)
T PTZ00267        126 GIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLM-P  204 (478)
T ss_pred             CEeEEEEEEEECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEEC-C
Confidence            788888887554 889999999 4699988754    34689999999999999999999999999999999999999 6


Q ss_pred             CCeeEEecccccccccCCCCC--CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           77 NKTVKIAADSGMAKEIDAPFD--AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        77 ~~~~~i~~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      .+.+++ +|||++........  ......||+.|+|||++.+.. ++.++|+||+||++|.
T Consensus       205 ~~~~kL-~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slG~~l~e  263 (478)
T PTZ00267        205 TGIIKL-GDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKR-YSKKADMWSLGVILYE  263 (478)
T ss_pred             CCcEEE-EeCcCceecCCccccccccccCCCccccCHhHhCCCC-CCcHHhHHHHHHHHHH
Confidence            788999 79999987644322  234567899999999997765 7889999999999873

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=8.9e-30  Score=171.75  Aligned_cols=120  Identities=32%  Similarity=0.326  Sum_probs=111.6

Q ss_pred             eecceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEeccccccc
Q 043346           12 VHKRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAK   90 (135)
Q Consensus        12 ~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~   90 (135)
                      +-++.|+||||++ |+|.-++++-+++.++.+..++..|+-||-+||++||+.||||.+|++++ ..+.+|| +|||+++
T Consensus       421 TmDRLyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd-~eGHiKi-~DFGmcK  498 (683)
T KOG0696|consen  421 TMDRLYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLD-SEGHIKI-ADFGMCK  498 (683)
T ss_pred             hhhheeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEec-cCCceEe-eeccccc
Confidence            5568999999996 59999999999999999999999999999999999999999999999999 6799999 8999999


Q ss_pred             ccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           91 EIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .-........+++|||.|+|||++.-.+ ++.++|+||+||+||
T Consensus       499 Eni~~~~TTkTFCGTPdYiAPEIi~YqP-YgksvDWWa~GVLLy  541 (683)
T KOG0696|consen  499 ENIFDGVTTKTFCGTPDYIAPEIIAYQP-YGKSVDWWAFGVLLY  541 (683)
T ss_pred             ccccCCcceeeecCCCcccccceEEecc-cccchhHHHHHHHHH
Confidence            8777767888999999999999998777 889999999999998

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.96  E-value=1.8e-29  Score=173.32  Aligned_cols=131  Identities=18%  Similarity=0.241  Sum_probs=107.9

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|+++++..+.++ ..++||||++ ++|.+++.. ..+++..+..++.|++.|++|||+++++||||||+||+++ ..+.
T Consensus       103 p~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~-~~~~  180 (371)
T cd05622         103 PWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLD-KSGH  180 (371)
T ss_pred             CCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEEC-CCCC
Confidence            3667777776544 7899999995 699999876 4688999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCC-CCCCCcccccccCcccccCCC---CCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFD-AHTTEMVILRYRAPKILFGRT---NCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~---~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||++........ ......||+.|+|||++.+..   .++.++|+||+||++|.
T Consensus       181 ikL-~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilye  239 (371)
T cd05622         181 LKL-ADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYE  239 (371)
T ss_pred             EEE-EeCCceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHH
Confidence            999 79999986643321 234567899999999996542   25678999999999973

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.96  E-value=4e-29  Score=172.68  Aligned_cols=131  Identities=22%  Similarity=0.320  Sum_probs=111.5

Q ss_pred             ccchhhhcccee-cceeEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            2 QEMMKSMSLWVH-KRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         2 ~~~~~~~~~~~~-~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      .|++++++.+.. ...+++||++.++|.+++...+.+++..+..++.|++.|+.|||+++++||||||+||+++ ..+.+
T Consensus       146 ~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~-~~~~~  224 (392)
T PHA03207        146 RAIINLIHAYRWKSTVCMVMPKYKCDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLD-EPENA  224 (392)
T ss_pred             CCccceeeeEeeCCEEEEEehhcCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEc-CCCCE
Confidence            467888777754 4789999999999999997778899999999999999999999999999999999999999 67889


Q ss_pred             EEecccccccccCCCCC--CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           81 KIAADSGMAKEIDAPFD--AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ++ +|||++........  ......+|+.|+|||++.+.. ++.++|+||+||++|.
T Consensus       225 ~l-~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslGvil~e  279 (392)
T PHA03207        225 VL-GDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDP-YCAKTDIWSAGLVLFE  279 (392)
T ss_pred             EE-ccCccccccCcccccccccccccccCccCHhHhcCCC-CCchhhHHHHHHHHHH
Confidence            99 89999876543322  223457899999999997766 6788999999999973

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.96  E-value=1.2e-29  Score=176.31  Aligned_cols=130  Identities=28%  Similarity=0.425  Sum_probs=119.3

Q ss_pred             ccchhhhccce-ecceeEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWV-HKRENLVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~-~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .||+++++... +...|+||||+ +|.+++++.+++...+..+...+.|++.|++|||+++++|||||.+|++++ ....
T Consensus       115 PnIvkl~~v~~t~~~lylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~-~~mn  193 (596)
T KOG0586|consen  115 PNIVKLFSVIETEATLYLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLD-ENMN  193 (596)
T ss_pred             cceeeeeeeeeecceeEEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccc-cccc
Confidence            47889998884 66999999999 679999999999999999999999999999999999999999999999999 6677


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ++| +|||++..+... ....+++|++.|.|||+..+..+.++.+|+||+|+++|
T Consensus       194 ikI-aDfgfS~~~~~~-~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly  246 (596)
T KOG0586|consen  194 IKI-ADFGFSTFFDYG-LMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLY  246 (596)
T ss_pred             eee-eccccceeeccc-ccccccCCCCCccChHhhcCcccCCcceehhhhhhhhe
Confidence            999 899999988743 56778899999999999999998999999999999997

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.96  E-value=3e-29  Score=166.72  Aligned_cols=129  Identities=19%  Similarity=0.266  Sum_probs=105.7

Q ss_pred             cchhhhccc-eecceeEEEeccC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            3 EMMKSMSLW-VHKRENLVFEYVN-INLHKFIQQ--YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         3 ~~~~~~~~~-~~~~~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      ++++....+ .++..+++||++. ++|.+++..  ...+++..+..++.|++.|+.|||+++++||||||+||+++ +.+
T Consensus        61 ~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~-~~~  139 (285)
T cd05631          61 FVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLD-DRG  139 (285)
T ss_pred             cEEEEEEEEccCCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEEC-CCC
Confidence            456665555 3447889999995 699888764  34689999999999999999999999999999999999998 678


Q ss_pred             eeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           79 TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      .+++ +|||++...... .......+++.|+|||++.+.. ++.++|+||+||++|+
T Consensus       140 ~~kl-~Dfg~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~-~~~~~DvwslGvil~e  193 (285)
T cd05631         140 HIRI-SDLGLAVQIPEG-ETVRGRVGTVGYMAPEVINNEK-YTFSPDWWGLGCLIYE  193 (285)
T ss_pred             CEEE-eeCCCcEEcCCC-CeecCCCCCCCccCHhhhcCCC-CCcccCchhHHHHHHH
Confidence            8999 799998765332 2223456899999999998766 7888999999999873

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.96  E-value=6.4e-29  Score=166.75  Aligned_cols=132  Identities=36%  Similarity=0.666  Sum_probs=110.5

Q ss_pred             ccchhhhcccee-cceeEEEeccCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVH-KRENLVFEYVNINLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~-~~~~lv~e~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++++.+.. +..+++|||++++|.+++... ..++...+..++.|++.|+.|||+++++||||+|+||+++ ..+.
T Consensus        64 ~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~-~~~~  142 (309)
T cd07872          64 ANIVTLHDIVHTDKSLTLVFEYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLIN-ERGE  142 (309)
T ss_pred             CCcceEEEEEeeCCeEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC-CCCC
Confidence            467778777744 488999999998999988764 4578999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||++..............+++.|+|||.+.+...++.++|+||+|+++|.
T Consensus       143 ~kl-~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~e  197 (309)
T cd07872         143 LKL-ADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFE  197 (309)
T ss_pred             EEE-CccccceecCCCccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHH
Confidence            999 8999987654443344455678899999999776557889999999999873

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.96  E-value=3.3e-29  Score=171.32  Aligned_cols=130  Identities=25%  Similarity=0.332  Sum_probs=114.0

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC--
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN--   77 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~--   77 (135)
                      .|++.+.+.++.+ ..++|||+++ |.|.+.+.+. .+++..+..++.|++.+++|||+.|++|||+||+|+++....  
T Consensus        96 pniv~l~~~~e~~~~~~lvmEL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~  174 (382)
T KOG0032|consen   96 PNIVQLKDAFEDPDSVYLVMELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEG  174 (382)
T ss_pred             CCEEEEEEEEEcCCeEEEEEEecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCC
Confidence            5788888888655 8899999995 6999999886 499999999999999999999999999999999999998442  


Q ss_pred             -CeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           78 -KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        78 -~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                       +.+++ +|||++..... .......+||+.|+|||++...+ ++..+|+||+|+++|.
T Consensus       175 ~~~ik~-~DFGla~~~~~-~~~~~~~~Gtp~y~APEvl~~~~-y~~~~DiWS~Gvi~yi  230 (382)
T KOG0032|consen  175 SGRIKL-IDFGLAKFIKP-GERLHTIVGTPEYVAPEVLGGRP-YGDEVDVWSIGVILYI  230 (382)
T ss_pred             CCcEEE-eeCCCceEccC-CceEeeecCCccccCchhhcCCC-CCcccchhHHHHHHHH
Confidence             47888 89999998776 45667789999999999998766 7889999999999984

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.96  E-value=2e-29  Score=163.54  Aligned_cols=117  Identities=27%  Similarity=0.341  Sum_probs=100.2

Q ss_pred             ceeEEEeccC-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeec--CCCeeEEecccccc
Q 043346           15 RENLVFEYVN-INLHKFIQQYH--PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI--ENKTVKIAADSGMA   89 (135)
Q Consensus        15 ~~~lv~e~~~-~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~--~~~~~~i~~d~~~~   89 (135)
                      ..-+|||.++ |.|.+.++.++  .+++.++..+..||..|+.|||+.+|.|||+||+|++...  .+..+|+ .|||++
T Consensus       133 cLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKL-tDfGFA  211 (400)
T KOG0604|consen  133 CLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKL-TDFGFA  211 (400)
T ss_pred             eeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEe-cccccc
Confidence            5668999995 69999998755  5999999999999999999999999999999999999873  3456788 899999


Q ss_pred             cccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           90 KEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +....+ ....+.+.||.|.|||++-... ++.++|+||+||++|
T Consensus       212 K~t~~~-~~L~TPc~TPyYvaPevlg~eK-ydkscdmwSlgVimY  254 (400)
T KOG0604|consen  212 KETQEP-GDLMTPCFTPYYVAPEVLGPEK-YDKSCDMWSLGVIMY  254 (400)
T ss_pred             cccCCC-ccccCCcccccccCHHHhCchh-cCCCCCccchhHHHH
Confidence            876654 3455567899999999995554 888999999999998

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=2.9e-29  Score=169.97  Aligned_cols=131  Identities=18%  Similarity=0.251  Sum_probs=106.6

Q ss_pred             cchhhhcccee-cceeEEEecc-CCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            3 EMMKSMSLWVH-KRENLVFEYV-NINLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         3 ~~~~~~~~~~~-~~~~lv~e~~-~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      ++++++..+.. +..|+||||+ +++|.+++.+ ...+++..+..++.|++.|++|||+++++||||||+||+++ ..+.
T Consensus        62 ~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~-~~~~  140 (331)
T cd05597          62 WITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLD-KNGH  140 (331)
T ss_pred             CCCceEEEEecCCeEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEEC-CCCC
Confidence            45666666644 4789999999 5699999976 45789999999999999999999999999999999999998 6788


Q ss_pred             eEEecccccccccCCCCC-CCCCCcccccccCcccccC----CCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFD-AHTTEMVILRYRAPKILFG----RTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~----~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||++........ ......+|+.|+|||++.+    ....+.++|+||+||++|+
T Consensus       141 ~kl-~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~e  200 (331)
T cd05597         141 IRL-ADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYE  200 (331)
T ss_pred             EEE-EECCceeecCCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHH
Confidence            999 79999876544322 2233568999999999963    2335778999999999974

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.96  E-value=2.1e-29  Score=172.88  Aligned_cols=131  Identities=20%  Similarity=0.259  Sum_probs=107.5

Q ss_pred             ccchhhhccceec-ceeEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++...+.++ ..|+||||+ +++|.+++.. ..+++..+..++.|++.|++|||+++++||||||+||+++ ..+.
T Consensus       103 ~~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~-~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~-~~~~  180 (370)
T cd05596         103 EWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLMSN-YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLD-KSGH  180 (370)
T ss_pred             CCcceEEEEEecCCEEEEEEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEc-CCCC
Confidence            3567777666444 789999999 4699998876 4688999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCC-CCCCCcccccccCcccccCCC---CCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFD-AHTTEMVILRYRAPKILFGRT---NCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~---~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||++........ ......||+.|+|||++.+..   .++.++|+|||||++|+
T Consensus       181 ~kL-~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilye  239 (370)
T cd05596         181 LKL-ADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYE  239 (370)
T ss_pred             EEE-EeccceeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHH
Confidence            999 79999876643322 234567899999999986532   36778999999999974

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.96  E-value=9.8e-29  Score=166.26  Aligned_cols=132  Identities=32%  Similarity=0.586  Sum_probs=107.2

Q ss_pred             ccchhhhccce---ecceeEEEeccCCCHHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCc
Q 043346            2 QEMMKSMSLWV---HKRENLVFEYVNINLHKFIQQY---------HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTM   69 (135)
Q Consensus         2 ~~~~~~~~~~~---~~~~~lv~e~~~~~L~~~~~~~---------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~   69 (135)
                      .|+++..+.+.   +...++++|+++++|.+++...         ..+++..+..++.|++.|++|||+++++||||||+
T Consensus        58 ~niv~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~  137 (317)
T cd07868          58 PNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPA  137 (317)
T ss_pred             CCCcceeeeEecCCCcEEEEEEeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHH
Confidence            36777777663   2367899999999999888632         25889999999999999999999999999999999


Q ss_pred             ceeee---cCCCeeEEecccccccccCCCCC---CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           70 NLLAD---IENKTVKIAADSGMAKEIDAPFD---AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        70 nil~~---~~~~~~~i~~d~~~~~~~~~~~~---~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ||++.   ...+.+++ +|||++........   ......+|+.|+|||++.+...++.++|+||+||++|
T Consensus       138 Nil~~~~~~~~~~~kl-~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~  207 (317)
T cd07868         138 NILVMGEGPERGRVKI-ADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFA  207 (317)
T ss_pred             HEEEecCCCCcCcEEE-eecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHH
Confidence            99994   24568999 79999987654322   2334577899999999987665788999999999987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.96  E-value=1.1e-28  Score=168.66  Aligned_cols=130  Identities=22%  Similarity=0.290  Sum_probs=109.7

Q ss_pred             ccchhhhccceec-ceeEEEeccCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNINLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++++++.+. ..++|+|++.++|.+++.. ...+++..+..++.|++.|+.|||+++++||||||+||+++ ..+.
T Consensus       117 ~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~-~~~~  195 (357)
T PHA03209        117 PSVIRMKDTLVSGAITCMVLPHYSSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFIN-DVDQ  195 (357)
T ss_pred             CCCcChhheEEeCCeeEEEEEccCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC-CCCC
Confidence            4788888888555 7889999999999999876 45789999999999999999999999999999999999999 6678


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||.+...... .......+|+.|+|||++.+.. ++.++|+||+||++|.
T Consensus       196 ~kl-~DfG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlGvvl~e  248 (357)
T PHA03209        196 VCI-GDLGAAQFPVVA-PAFLGLAGTVETNAPEVLARDK-YNSKADIWSAGIVLFE  248 (357)
T ss_pred             EEE-ecCccccccccC-cccccccccccccCCeecCCCC-CCchhhHHHHHHHHHH
Confidence            899 899998743322 2233456889999999998766 7889999999999873

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.96  E-value=8.8e-29  Score=167.87  Aligned_cols=130  Identities=25%  Similarity=0.447  Sum_probs=104.1

Q ss_pred             ccchhhhccceec--ceeEEEeccC-CCHHHHHHhc--------------------------------------------
Q 043346            2 QEMMKSMSLWVHK--RENLVFEYVN-INLHKFIQQY--------------------------------------------   34 (135)
Q Consensus         2 ~~~~~~~~~~~~~--~~~lv~e~~~-~~L~~~~~~~--------------------------------------------   34 (135)
                      +|++++++.+...  ..+++|||++ |+|.+++...                                            
T Consensus        71 ~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (338)
T cd05102          71 LNVVNLLGACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQ  150 (338)
T ss_pred             cceeeEEeEecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccc
Confidence            4677887766443  5789999995 6999998752                                            


Q ss_pred             ------------------CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEecccccccccCCCC
Q 043346           35 ------------------HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPF   96 (135)
Q Consensus        35 ------------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~~~~~~   96 (135)
                                        ..++...+..++.|++.|+.|||+++++||||||+||+++ ..+.+++ +|||+++......
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~-~~~~~kl-~DfG~a~~~~~~~  228 (338)
T cd05102         151 PSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLS-ENNVVKI-CDFGLARDIYKDP  228 (338)
T ss_pred             cccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEc-CCCcEEE-eecccccccccCc
Confidence                              2366778899999999999999999999999999999999 6788999 8999997653321


Q ss_pred             C--CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           97 D--AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        97 ~--~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .  ......+++.|+|||++.+.. ++.++|+||||+++|
T Consensus       229 ~~~~~~~~~~~~~y~aPE~~~~~~-~~~~sDiwslG~il~  267 (338)
T cd05102         229 DYVRKGSARLPLKWMAPESIFDKV-YTTQSDVWSFGVLLW  267 (338)
T ss_pred             chhcccCCCCCccccCcHHhhcCC-CCcccCHHHHHHHHH
Confidence            1  122334567899999997766 678899999999987

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=6.3e-30  Score=175.55  Aligned_cols=127  Identities=26%  Similarity=0.394  Sum_probs=115.6

Q ss_pred             chhhhccc-eecceeEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeE
Q 043346            4 MMKSMSLW-VHKRENLVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVK   81 (135)
Q Consensus         4 ~~~~~~~~-~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~   81 (135)
                      |+++|.-+ .++..|++||-| +|.|+..++..+.+++.+...++.-++.|++|||++||+.|||||+|.+++ ..|.+|
T Consensus       482 IvrLYrTfrd~kyvYmLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd-~~Gy~K  560 (732)
T KOG0614|consen  482 IVRLYRTFRDSKYVYMLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLD-NRGYLK  560 (732)
T ss_pred             HHHHHHHhccchhhhhhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeec-cCCceE
Confidence            56777777 455889999999 789999999999999999999999999999999999999999999999999 889999


Q ss_pred             EecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           82 IAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        82 i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      + .|||+++.+... ....+++|||.|.|||+++++. ...++|.||||+++|
T Consensus       561 L-VDFGFAKki~~g-~KTwTFcGTpEYVAPEIILnKG-HD~avDyWaLGIli~  610 (732)
T KOG0614|consen  561 L-VDFGFAKKIGSG-RKTWTFCGTPEYVAPEIILNKG-HDRAVDYWALGILIY  610 (732)
T ss_pred             E-eehhhHHHhccC-CceeeecCCcccccchhhhccC-cchhhHHHHHHHHHH
Confidence            9 699999998776 4567899999999999999887 678999999999987

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.96  E-value=1.3e-28  Score=163.21  Aligned_cols=131  Identities=31%  Similarity=0.687  Sum_probs=111.1

Q ss_pred             ccchhhhccceec-ceeEEEeccCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNINLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|+++..+.+.+. ..++++||++++|.+++.+ .+.+++..+..++.|++.|+.+||+++++|+||+|+||+++ ..+.
T Consensus        59 ~~i~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~-~~~~  137 (284)
T cd07839          59 KNIVRLYDVLHSDKKLTLVFEYCDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLIN-KNGE  137 (284)
T ss_pred             CCeeeHHHHhccCCceEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEc-CCCc
Confidence            3677777777544 7899999999999998875 56789999999999999999999999999999999999999 6688


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +++ +|||++.....+........+++.|+|||.+.+...++.++|+||+|+++|
T Consensus       138 ~~l-~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~  191 (284)
T cd07839         138 LKL-ADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFA  191 (284)
T ss_pred             EEE-CccchhhccCCCCCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHH
Confidence            999 899999876554444445567889999999877655688999999999987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.96  E-value=3.9e-29  Score=157.46  Aligned_cols=128  Identities=25%  Similarity=0.425  Sum_probs=115.1

Q ss_pred             ccchhhhccceec-ceeEEEecc-CCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYV-NINLHKFIQ--QYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN   77 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~-~~~L~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~   77 (135)
                      .||+++|.++.+. +.|+++||. +|++.+.+.  ...++++.....+..|++.|+.|||.++++|||+||+|++++ ..
T Consensus        82 pnilrlY~~fhd~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg-~~  160 (281)
T KOG0580|consen   82 PNILRLYGYFHDSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLG-SA  160 (281)
T ss_pred             ccHHhhhhheeccceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccC-CC
Confidence            4899999999665 999999999 689999998  456899999999999999999999999999999999999999 67


Q ss_pred             CeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           78 KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +..++ +|||.+..-.  .....+.+||..|.+||...+.. .+..+|+|++|++.|
T Consensus       161 ~~lki-AdfGwsV~~p--~~kR~tlcgt~dyl~pEmv~~~~-hd~~Vd~w~lgvl~y  213 (281)
T KOG0580|consen  161 GELKI-ADFGWSVHAP--SNKRKTLCGTLDYLPPEMVEGRG-HDKFVDLWSLGVLCY  213 (281)
T ss_pred             CCeec-cCCCceeecC--CCCceeeecccccCCHhhcCCCC-ccchhhHHHHHHHHH
Confidence            88999 8999987644  45667889999999999998887 678999999999876

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=6e-30  Score=168.12  Aligned_cols=124  Identities=29%  Similarity=0.353  Sum_probs=114.2

Q ss_pred             hccceecceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEeccc
Q 043346            8 MSLWVHKRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADS   86 (135)
Q Consensus         8 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~   86 (135)
                      |+|.++.+.|+||||.+ |.|.-++.+...++++....+...|+.||.|||+++|+.||+|.+|++++ ..|++|+ +||
T Consensus       235 YsFQt~drlCFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLD-kDGHIKi-tDF  312 (516)
T KOG0690|consen  235 YSFQTQDRLCFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLD-KDGHIKI-TDF  312 (516)
T ss_pred             hhhccCceEEEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheec-cCCceEe-eec
Confidence            67888889999999996 59999999888999999999999999999999999999999999999999 7799999 899


Q ss_pred             ccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           87 GMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      |+++.--.......+++|||.|+|||++.... +++++|+|.+||++|
T Consensus       313 GLCKE~I~~g~t~kTFCGTPEYLAPEVleDnD-YgraVDWWG~GVVMY  359 (516)
T KOG0690|consen  313 GLCKEEIKYGDTTKTFCGTPEYLAPEVLEDND-YGRAVDWWGVGVVMY  359 (516)
T ss_pred             ccchhcccccceeccccCChhhcCchhhcccc-ccceeehhhhhHHHH
Confidence            99987656656778999999999999997776 899999999999998

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.96  E-value=2.4e-29  Score=170.37  Aligned_cols=131  Identities=17%  Similarity=0.237  Sum_probs=106.7

Q ss_pred             cchhhhccce-ecceeEEEecc-CCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            3 EMMKSMSLWV-HKRENLVFEYV-NINLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         3 ~~~~~~~~~~-~~~~~lv~e~~-~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      +++++...+. ++..|+||||+ +++|.+++.+ ++.+++..+..++.|++.|++|+|+++++||||||+||+++ ..+.
T Consensus        62 ~i~~l~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~-~~~~  140 (331)
T cd05624          62 WITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLD-MNGH  140 (331)
T ss_pred             CEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEc-CCCC
Confidence            4555555554 44789999999 5699999987 46789999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCC-CCCCcccccccCcccccCC----CCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDA-HTTEMVILRYRAPKILFGR----TNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~-~~~~~~~~~~~ape~~~~~----~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||++......... .....|++.|+|||++.+.    ...+.++|+||+|+++|+
T Consensus       141 ~kl-~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~e  200 (331)
T cd05624         141 IRL-ADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYE  200 (331)
T ss_pred             EEE-EeccceeeccCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhh
Confidence            999 799998766543222 2345689999999998652    235778999999999984

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.96  E-value=3.3e-29  Score=169.71  Aligned_cols=131  Identities=18%  Similarity=0.253  Sum_probs=105.8

Q ss_pred             cchhhhccce-ecceeEEEecc-CCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            3 EMMKSMSLWV-HKRENLVFEYV-NINLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         3 ~~~~~~~~~~-~~~~~lv~e~~-~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      ++++....+. ++..|+||||+ +++|.+++.+ ...+++..+..++.|++.|+.+||+++++||||||+||+++ ..+.
T Consensus        62 ~i~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~-~~~~  140 (332)
T cd05623          62 WITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMD-MNGH  140 (332)
T ss_pred             CEeeEEEEEecCCEEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEC-CCCC
Confidence            3445555553 34789999999 5799999987 46789999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCC-CCCCCcccccccCcccccC----CCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFD-AHTTEMVILRYRAPKILFG----RTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~----~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||++........ ......||+.|+|||++.+    ...++.++|+||+||++|.
T Consensus       141 ~kL-~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~e  200 (332)
T cd05623         141 IRL-ADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYE  200 (332)
T ss_pred             EEE-eecchheecccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHH
Confidence            999 89999876543322 2234578999999999863    3336788999999999873

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.96  E-value=3.6e-29  Score=169.31  Aligned_cols=131  Identities=22%  Similarity=0.297  Sum_probs=107.6

Q ss_pred             cchhhhccceec-ceeEEEecc-CCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            3 EMMKSMSLWVHK-RENLVFEYV-NINLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         3 ~~~~~~~~~~~~-~~~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      +++++...+.++ ..++||||+ +++|.+++.+. +.+++..+..++.|++.|+.+||+++++||||||+||+++ ..+.
T Consensus        62 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~-~~~~  140 (330)
T cd05601          62 WIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLID-RTGH  140 (330)
T ss_pred             CCcceeeEEecCCeEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEEC-CCCC
Confidence            566666666444 789999999 56999999875 6899999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCC-CCCCCcccccccCcccccC-----CCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFD-AHTTEMVILRYRAPKILFG-----RTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~-----~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||++........ ......+|+.|+|||++..     ...++.++|+||+|+++|.
T Consensus       141 ~kL-~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~e  201 (330)
T cd05601         141 IKL-ADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYE  201 (330)
T ss_pred             EEe-ccCCCCeECCCCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeee
Confidence            999 89999986644322 2234468899999999863     2336778999999999874

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.96  E-value=1.8e-28  Score=168.39  Aligned_cols=131  Identities=34%  Similarity=0.570  Sum_probs=110.2

Q ss_pred             ccchhhhccceec------ceeEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeec
Q 043346            2 QEMMKSMSLWVHK------RENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI   75 (135)
Q Consensus         2 ~~~~~~~~~~~~~------~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~   75 (135)
                      .|+++.++++...      ..|+++|+++++|.+.+.....+++..+..++.|++.|+.|||+++++||||||+||+++ 
T Consensus        59 ~niv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~-  137 (372)
T cd07853          59 DNVLSALDILQPPHIDPFEEIYVVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVN-  137 (372)
T ss_pred             CCcCCHhheecCCCccccceEEEEeeccccCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEEC-
Confidence            3677777776433      578999999999999998878899999999999999999999999999999999999999 


Q ss_pred             CCCeeEEecccccccccCCCC-CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           76 ENKTVKIAADSGMAKEIDAPF-DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        76 ~~~~~~i~~d~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ..+.+++ +|||++....... .......+++.|+|||.+.+...++.++|+||+||++|
T Consensus       138 ~~~~~kL-~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~  196 (372)
T cd07853         138 SNCVLKI-CDFGLARVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFA  196 (372)
T ss_pred             CCCCEEe-ccccceeecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHH
Confidence            6788999 8999987654322 22234467889999999987665788999999999987

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.96  E-value=3.6e-29  Score=173.74  Aligned_cols=129  Identities=26%  Similarity=0.348  Sum_probs=117.6

Q ss_pred             ccchhhhccceec-ceeEEEeccC-C-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-I-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~-~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      .||+|+.++++++ .+|++||..+ | +|.+++..+..+++.++..++.|++.|+++||++||+|||||-+|+.++ .+|
T Consensus       629 ~NIlKlLdfFEddd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd-~~g  707 (772)
T KOG1152|consen  629 ENILKLLDFFEDDDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVD-SNG  707 (772)
T ss_pred             cchhhhhheeecCCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEEe-cCC
Confidence            4899999999777 7789999884 5 9999999989999999999999999999999999999999999999999 789


Q ss_pred             eeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           79 TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .+|+ +|||.+......  +-..++||..|.|||++.|.++.+..-|+|++|++||
T Consensus       708 ~~kl-idfgsaa~~ksg--pfd~f~gtv~~aapevl~g~~y~gk~qdiwalgilly  760 (772)
T KOG1152|consen  708 FVKL-IDFGSAAYTKSG--PFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLY  760 (772)
T ss_pred             eEEE-eeccchhhhcCC--CcceeeeeccccchhhhCCCccCCCcchhhhhhheee
Confidence            9999 799999876543  4667899999999999999988888889999999997

>PTZ00284 protein kinase; Provisional

Probab=99.96  E-value=1.8e-28  Score=172.73  Aligned_cols=127  Identities=20%  Similarity=0.371  Sum_probs=104.8

Q ss_pred             chhhhcccee--cceeEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhh-CCcccCCCCCcceeeecCCC--
Q 043346            4 MMKSMSLWVH--KRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHA-RKIIHRDLTTMNLLADIENK--   78 (135)
Q Consensus         4 ~~~~~~~~~~--~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~~~nil~~~~~~--   78 (135)
                      ++++.+++..  .+.++|||+++++|.+++.+.+.+++..+..++.|++.||.|||+ .||+||||||+||+++..+.  
T Consensus       193 i~~i~~~~~~~~~~~~iv~~~~g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~  272 (467)
T PTZ00284        193 LMKIQRYFQNETGHMCIVMPKYGPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVV  272 (467)
T ss_pred             eeeeEEEEEcCCceEEEEEeccCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCccc
Confidence            4555566543  368899999999999999888889999999999999999999998 59999999999999984322  


Q ss_pred             -------------eeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           79 -------------TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        79 -------------~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                                   .+|+ +|||.+....   .......+|+.|+|||++.+.. ++.++|+|||||++|.
T Consensus       273 ~~~~~~~~~~~~~~vkl-~DfG~~~~~~---~~~~~~~gt~~Y~APE~~~~~~-~~~~~DiwSlGvil~e  337 (467)
T PTZ00284        273 DPVTNRALPPDPCRVRI-CDLGGCCDER---HSRTAIVSTRHYRSPEVVLGLG-WMYSTDMWSMGCIIYE  337 (467)
T ss_pred             ccccccccCCCCceEEE-CCCCccccCc---cccccccCCccccCcHHhhcCC-CCcHHHHHHHHHHHHH
Confidence                         4888 8999875322   2234567899999999998776 7889999999999973

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.96  E-value=1.7e-28  Score=162.93  Aligned_cols=131  Identities=27%  Similarity=0.543  Sum_probs=106.9

Q ss_pred             ccchhhhcccee-cceeEEEeccCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVH-KRENLVFEYVNINLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~-~~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|+++..+.+.. +..++||||+.+++.+.+.. ...+++..+..++.|++.|+.|||+.+++|+||+|+||+++ ..+.
T Consensus        60 ~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~-~~~~  138 (287)
T cd07848          60 ENIVELKEAFRRRGKLYLVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLIS-HNDV  138 (287)
T ss_pred             ccccchhhhEecCCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc-CCCc
Confidence            367777777744 47899999997655555543 56789999999999999999999999999999999999998 6788


Q ss_pred             eEEecccccccccCCCCC-CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFD-AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||++........ ......+++.|+|||++.+.. ++.++|+||+||++|+
T Consensus       139 ~kl-~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DiwslGvil~e  193 (287)
T cd07848         139 LKL-CDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAP-YGKAVDMWSVGCILGE  193 (287)
T ss_pred             EEE-eeccCcccccccccccccccccccccCCcHHHcCCC-CCCchhHHhHHHHHHH
Confidence            999 79999987643322 223456889999999998766 6789999999999873

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.96  E-value=2.3e-28  Score=171.40  Aligned_cols=130  Identities=22%  Similarity=0.339  Sum_probs=110.0

Q ss_pred             ccchhhhccceec-ceeEEEeccCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNINLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .||+++++++..+ ..+++||++.++|.+++... ..++...+..++.|++.||.|||++|++||||||+||+++ ..+.
T Consensus       220 pnIv~l~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~-~~~~  298 (461)
T PHA03211        220 PAVLALLDVRVVGGLTCLVLPKYRSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVN-GPED  298 (461)
T ss_pred             CCCCcEEEEEEECCEEEEEEEccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEEC-CCCC
Confidence            4788888877544 78899999999999998763 4689999999999999999999999999999999999999 6678


Q ss_pred             eEEecccccccccCCCCC--CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFD--AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +++ +|||+++.......  ......||+.|+|||++.+.. ++.++|+|||||++|
T Consensus       299 vkL-~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~-~~~~sDvwSlGviL~  353 (461)
T PHA03211        299 ICL-GDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDP-YTPSVDIWSAGLVIF  353 (461)
T ss_pred             EEE-cccCCceecccccccccccccCCCcCCcCHHHHcCCC-CCchHHHHHHHHHHH
Confidence            899 89999876543211  223456899999999998776 788999999999987

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=7.4e-29  Score=169.01  Aligned_cols=130  Identities=26%  Similarity=0.350  Sum_probs=109.9

Q ss_pred             ccchhhhccceecc--eeEEEecc-CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCCcceee
Q 043346            2 QEMMKSMSLWVHKR--ENLVFEYV-NINLHKFIQQYH--PMDSHLIKKFLYCILSGISYCHAR---KIIHRDLTTMNLLA   73 (135)
Q Consensus         2 ~~~~~~~~~~~~~~--~~lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~   73 (135)
                      +|++++++++.+..  ..+|+||+ +|+|.+++....  .+++....+|+.+++.|+.|||+.   .|+|||||++||++
T Consensus       131 ~Nlv~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILL  210 (361)
T KOG1187|consen  131 PNLVKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILL  210 (361)
T ss_pred             cCcccEEEEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeE
Confidence            69999999997663  89999999 789999998744  889999999999999999999984   39999999999999


Q ss_pred             ecCCCeeEEecccccccccCCCCCCCCCC-cccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           74 DIENKTVKIAADSGMAKEIDAPFDAHTTE-MVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        74 ~~~~~~~~i~~d~~~~~~~~~~~~~~~~~-~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      + .+...|+ +|||+++............ .||..|++||....+. .+.++|+|||||++.
T Consensus       211 D-~~~~aKl-sDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~-lt~KsDVySFGVvll  269 (361)
T KOG1187|consen  211 D-EDFNAKL-SDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGK-LTEKSDVYSFGVVLL  269 (361)
T ss_pred             C-CCCCEEc-cCccCcccCCccccceeeecCCCCccCChhhhccCC-cCcccccccchHHHH
Confidence            9 8899999 8999996543311222222 7899999999997654 788999999999873

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.96  E-value=2.8e-28  Score=161.92  Aligned_cols=129  Identities=31%  Similarity=0.527  Sum_probs=106.4

Q ss_pred             cchhhhcccee------cceeEEEeccCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeee
Q 043346            3 EMMKSMSLWVH------KRENLVFEYVNINLHKFIQQY--HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD   74 (135)
Q Consensus         3 ~~~~~~~~~~~------~~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~   74 (135)
                      |+++.++++..      ...++++|++.++|.+++.+.  ..+++..+..++.|++.|++|+|+++++|+||+|+||+++
T Consensus        63 ni~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~  142 (288)
T cd07863          63 NIVRLMDVCATSRTDRETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVT  142 (288)
T ss_pred             CeeeeeeeeccccCCCCceEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC
Confidence            56677666532      247899999998999998763  3589999999999999999999999999999999999999


Q ss_pred             cCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           75 IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        75 ~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                       ..+.+++ +|||++...... .......+++.|+|||++.+.. .+.++|+||+||++|.
T Consensus       143 -~~~~~kl-~dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~~l~~  199 (288)
T cd07863         143 -SGGQVKL-ADFGLARIYSCQ-MALTPVVVTLWYRAPEVLLQST-YATPVDMWSVGCIFAE  199 (288)
T ss_pred             -CCCCEEE-CccCccccccCc-ccCCCccccccccCchHhhCCC-CCCcchhhhHHHHHHH
Confidence             6788999 899998765433 2233456788999999997765 7888999999999873

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.96  E-value=3.9e-28  Score=162.73  Aligned_cols=125  Identities=22%  Similarity=0.312  Sum_probs=103.2

Q ss_pred             hhccc-eecceeEEEecc-CCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEE
Q 043346            7 SMSLW-VHKRENLVFEYV-NINLHKFIQQ--YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKI   82 (135)
Q Consensus         7 ~~~~~-~~~~~~lv~e~~-~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i   82 (135)
                      ++..+ +++..|++|||| +|+|....++  ++.++++.+..++.+++.||+|||..||+.|||||+||++- ++|++.+
T Consensus       142 LYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvr-edGHIML  220 (459)
T KOG0610|consen  142 LYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVR-EDGHIML  220 (459)
T ss_pred             hhheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEe-cCCcEEe
Confidence            34444 566889999999 5699999887  45799999999999999999999999999999999999999 7898998


Q ss_pred             ecccccccccCC---------------------------------C-C----------------------CCCCCCcccc
Q 043346           83 AADSGMAKEIDA---------------------------------P-F----------------------DAHTTEMVIL  106 (135)
Q Consensus        83 ~~d~~~~~~~~~---------------------------------~-~----------------------~~~~~~~~~~  106 (135)
                       .||.++.....                                 . .                      .....++||-
T Consensus       221 -sDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGTh  299 (459)
T KOG0610|consen  221 -SDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTH  299 (459)
T ss_pred             -eeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCcccccccccc
Confidence             79877643210                                 0 0                      0123468899


Q ss_pred             cccCcccccCCCCCCchhHHHHhhhhhh
Q 043346          107 RYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus       107 ~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .|.|||++.|.. .+.++|+|+||+++|
T Consensus       300 EYlAPEvI~G~G-HgsAVDWWtfGIflY  326 (459)
T KOG0610|consen  300 EYLAPEVIRGEG-HGSAVDWWTFGIFLY  326 (459)
T ss_pred             ccccceeeecCC-CCchhhHHHHHHHHH
Confidence            999999999887 789999999999998

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.96  E-value=3e-28  Score=160.26  Aligned_cols=131  Identities=21%  Similarity=0.319  Sum_probs=109.3

Q ss_pred             cchhhhcccee-cceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            3 EMMKSMSLWVH-KRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         3 ~~~~~~~~~~~-~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      |+++..+.+.. +..++++|+++ ++|.+++...+.+++..+..++.|++.|+.|||+.|++|+||+|+||+++ ..+.+
T Consensus        67 ~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~-~~~~~  145 (267)
T cd06645          67 NIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLT-DNGHV  145 (267)
T ss_pred             CeeeEEEEEEeCCEEEEEEeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC-CCCCE
Confidence            56677666644 48899999995 69999998888899999999999999999999999999999999999999 67789


Q ss_pred             EEecccccccccCCCCCCCCCCcccccccCccccc--CCCCCCchhHHHHhhhhhhC
Q 043346           81 KIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILF--GRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~--~~~~~~~~~D~wslg~il~~  135 (135)
                      ++ +|||++..............+++.|+|||.+.  .....+.++|+||+||++|+
T Consensus       146 ~l-~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~  201 (267)
T cd06645         146 KL-ADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIE  201 (267)
T ss_pred             EE-CcceeeeEccCcccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHH
Confidence            99 79999876654444445567889999999974  22236778999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.96  E-value=5.4e-28  Score=163.77  Aligned_cols=129  Identities=17%  Similarity=0.332  Sum_probs=109.6

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhC-CcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHAR-KIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~i~h~dl~~~nil~~~~~~   78 (135)
                      .|++++++.+..+ ..++||||+. ++|.+++.+...+++..+..++.|++.|+.|||++ +++|+||||+||+++ ..+
T Consensus        63 ~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~-~~~  141 (331)
T cd06649          63 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVN-SRG  141 (331)
T ss_pred             CCCCeEEEEEEECCEEEEEeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEc-CCC
Confidence            3778888777544 7899999995 69999998878899999999999999999999986 699999999999999 678


Q ss_pred             eeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           79 TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      .+++ +|||++......  ......+++.|+|||++.+.. .+.++|+||+||++|.
T Consensus       142 ~~kl-~Dfg~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~-~~~~~DiwslG~il~e  194 (331)
T cd06649         142 EIKL-CDFGVSGQLIDS--MANSFVGTRSYMSPERLQGTH-YSVQSDIWSMGLSLVE  194 (331)
T ss_pred             cEEE-ccCccccccccc--ccccCCCCcCcCCHhHhcCCC-CCchHhHHHHHHHHHH
Confidence            8999 899998765433  233456889999999998765 7889999999999873

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.95  E-value=5.2e-28  Score=160.38  Aligned_cols=131  Identities=34%  Similarity=0.710  Sum_probs=109.8

Q ss_pred             ccchhhhcccee-cceeEEEeccCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC
Q 043346            2 QEMMKSMSLWVH-KRENLVFEYVNINLHKFIQQ---YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN   77 (135)
Q Consensus         2 ~~~~~~~~~~~~-~~~~lv~e~~~~~L~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~   77 (135)
                      .|+++..+.+.+ +..++|||+++++|.+++..   +..+++..+..++.|++.||.|||+++++|+||+|+||+++ .+
T Consensus        59 ~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~-~~  137 (285)
T cd07861          59 PNIVCLQDVLMQESRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLID-NK  137 (285)
T ss_pred             CCEeeeEEEEeeCCeEEEEEecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEc-CC
Confidence            367778777754 48899999998899988865   25689999999999999999999999999999999999999 67


Q ss_pred             CeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           78 KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +.+++ +|||++.....+........+++.|+|||.+.+....+.++|+||+|+++|
T Consensus       138 ~~~~l-~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~  193 (285)
T cd07861         138 GVIKL-ADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFA  193 (285)
T ss_pred             CcEEE-CcccceeecCCCcccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHH
Confidence            88999 899998766544333444566888999999877655678899999999987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.95  E-value=4.4e-28  Score=162.15  Aligned_cols=132  Identities=35%  Similarity=0.661  Sum_probs=110.8

Q ss_pred             ccchhhhccceec-ceeEEEeccCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNINLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++.+.+..+ ..+++|||++++|.+++.+ ...+++..+..++.|++.|+.+||+++++|+||+|+||+++ ..+.
T Consensus        64 ~nI~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~-~~~~  142 (301)
T cd07873          64 ANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLIN-ERGE  142 (301)
T ss_pred             CCcceEEEEEecCCeEEEEEeccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEEC-CCCc
Confidence            3678888877544 7889999999999999876 35688999999999999999999999999999999999999 6688


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||++.....+........+++.|+|||.+.+....+.++|+||+|+++|+
T Consensus       143 ~kl-~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~e  197 (301)
T cd07873         143 LKL-ADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYE  197 (301)
T ss_pred             EEE-CcCcchhccCCCCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHH
Confidence            999 8999987654443334445678899999998776657889999999999873

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.95  E-value=4.5e-28  Score=165.71  Aligned_cols=128  Identities=28%  Similarity=0.474  Sum_probs=104.9

Q ss_pred             ccchhhhccceec-------ceeEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeee
Q 043346            2 QEMMKSMSLWVHK-------RENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD   74 (135)
Q Consensus         2 ~~~~~~~~~~~~~-------~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~   74 (135)
                      .|++++++.+...       ..|++||+++++|.+.+..  .+++..+..++.|++.|+.|||+++++||||||+||+++
T Consensus        80 ~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~  157 (359)
T cd07876          80 KNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIHM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK  157 (359)
T ss_pred             CCEeeeeeeeccCCCccccceeEEEEeCCCcCHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC
Confidence            3667777665322       4689999999888887754  478899999999999999999999999999999999999


Q ss_pred             cCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           75 IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        75 ~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                       .++.+++ +|||++...... .......+|+.|+|||++.+.. ++.++|+||+|+++|.
T Consensus       158 -~~~~~kl-~Dfg~a~~~~~~-~~~~~~~~t~~y~aPE~~~~~~-~~~~~DiwSlG~il~e  214 (359)
T cd07876         158 -SDCTLKI-LDFGLARTACTN-FMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGE  214 (359)
T ss_pred             -CCCCEEE-ecCCCccccccC-ccCCCCcccCCCCCchhccCCC-CCcchhhHHHHHHHHH
Confidence             6788999 799998754332 2234457789999999998766 6788999999999873

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.95  E-value=7.2e-29  Score=151.52  Aligned_cols=131  Identities=31%  Similarity=0.670  Sum_probs=121.0

Q ss_pred             ccchhhhccc-eecceeEEEeccCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLW-VHKRENLVFEYVNINLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~-~~~~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      +|++++.+.. .++..-+|+|+|..+|..+.+. ++.++.+.+..++.|++.|+.+||+.++.|||+||.|.+++ .++.
T Consensus        61 knivrl~dvlhsdkkltlvfe~cdqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin-~nge  139 (292)
T KOG0662|consen   61 KNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLIN-RNGE  139 (292)
T ss_pred             cceeehhhhhccCceeEEeHHHhhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEec-cCCc
Confidence            6888998888 5558899999999999999987 78899999999999999999999999999999999999999 7899


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .|+ +|||+++-++-+..+.+..+.|..|.+|.++.|..-++.+.|+||.||++.
T Consensus       140 lkl-adfglarafgipvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifa  193 (292)
T KOG0662|consen  140 LKL-ADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFA  193 (292)
T ss_pred             EEe-cccchhhhcCCceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHH
Confidence            999 899999999988878888888999999999998887899999999999975

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=9.6e-30  Score=171.28  Aligned_cols=129  Identities=22%  Similarity=0.350  Sum_probs=113.1

Q ss_pred             cchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            3 EMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         3 ~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      |+.+.+..+-.+ ..|++||||+ |++.+.++....+++..+..++++++.|+.|+|+++.+|||||+.||++. ..+.+
T Consensus        72 ~it~yygsyl~g~~LwiiMey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s-~~g~v  150 (467)
T KOG0201|consen   72 NITEYYGSYLKGTKLWIIMEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLS-ESGDV  150 (467)
T ss_pred             hHHhhhhheeecccHHHHHHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEe-ccCcE
Confidence            455666666444 8899999995 69999999877779999999999999999999999999999999999999 55999


Q ss_pred             EEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           81 KIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ++ +|||.+...........+++|||.|||||++.+.. +..++|+||||++.+
T Consensus       151 kl-~DfgVa~ql~~~~~rr~tfvGTPfwMAPEVI~~~~-Y~~KADIWSLGITai  202 (467)
T KOG0201|consen  151 KL-ADFGVAGQLTNTVKRRKTFVGTPFWMAPEVIKQSG-YDTKADIWSLGITAI  202 (467)
T ss_pred             EE-Eecceeeeeechhhccccccccccccchhhhcccc-ccchhhhhhhhHHHH
Confidence            99 89999998877766678999999999999998655 788999999999875

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.95  E-value=6.4e-28  Score=165.21  Aligned_cols=128  Identities=28%  Similarity=0.484  Sum_probs=105.2

Q ss_pred             ccchhhhcccee-------cceeEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeee
Q 043346            2 QEMMKSMSLWVH-------KRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD   74 (135)
Q Consensus         2 ~~~~~~~~~~~~-------~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~   74 (135)
                      +|+++.++.+..       ...|+|||+++++|.+.+..  .++...+..++.|++.|+.|||+++++||||||+||+++
T Consensus        83 ~~ii~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~  160 (364)
T cd07875          83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK  160 (364)
T ss_pred             CCccccceeecccccccccCeEEEEEeCCCCCHHHHHHh--cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEEC
Confidence            356666655422       24789999999999888864  478889999999999999999999999999999999999


Q ss_pred             cCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           75 IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        75 ~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                       .++.+++ +|||+++..... .......+++.|+|||++.+.. ++.++|+|||||++|.
T Consensus       161 -~~~~~kL-~DfG~a~~~~~~-~~~~~~~~t~~y~aPE~~~~~~-~~~~~DiwSlG~il~e  217 (364)
T cd07875         161 -SDCTLKI-LDFGLARTAGTS-FMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGE  217 (364)
T ss_pred             -CCCcEEE-EeCCCccccCCC-CcccCCcccCCcCCHHHHhCCC-CCchhhHHhHHHHHHH
Confidence             6788999 799999765433 2334557889999999998766 7889999999999873

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.95  E-value=6.6e-28  Score=163.93  Aligned_cols=128  Identities=23%  Similarity=0.477  Sum_probs=106.5

Q ss_pred             ccchhhhcccee-------cceeEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeee
Q 043346            2 QEMMKSMSLWVH-------KRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD   74 (135)
Q Consensus         2 ~~~~~~~~~~~~-------~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~   74 (135)
                      .|++++++.+..       ...++++++++++|.+.+.. ..+++..+..++.|++.|+.|||+++++||||||+||+++
T Consensus        74 ~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~  152 (343)
T cd07878          74 ENVIGLLDVFTPATSIENFNEVYLVTNLMGADLNNIVKC-QKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVN  152 (343)
T ss_pred             CchhhhhhhhcccccccccCcEEEEeecCCCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEEC
Confidence            356777666532       24689999998899887765 5799999999999999999999999999999999999999


Q ss_pred             cCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           75 IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        75 ~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                       .++.+++ +|||++......   .....+++.|+|||++.+...++.++|+||+||++|+
T Consensus       153 -~~~~~kl-~Dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~e  208 (343)
T cd07878         153 -EDCELRI-LDFGLARQADDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE  208 (343)
T ss_pred             -CCCCEEE-cCCccceecCCC---cCCccccccccCchHhcCCccCCchhhhHhHHHHHHH
Confidence             6788999 899998765432   2345688999999999875557889999999999873

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.95  E-value=5.9e-28  Score=163.72  Aligned_cols=129  Identities=17%  Similarity=0.331  Sum_probs=108.7

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhC-CcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHAR-KIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~i~h~dl~~~nil~~~~~~   78 (135)
                      .|+++.++.+..+ ..+++|||+. ++|.+++.+.+.+++..+..++.|++.|+.|||++ +++|+||||+||+++ ..+
T Consensus        63 ~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~-~~~  141 (333)
T cd06650          63 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVN-SRG  141 (333)
T ss_pred             CcccceeEEEEECCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEc-CCC
Confidence            4778888777544 8899999995 69999998878899999999999999999999985 799999999999998 667


Q ss_pred             eeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           79 TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      .+++ +|||++......  ......++..|+|||++.+.. .+.++|+||+||++|+
T Consensus       142 ~~kL-~Dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslG~il~~  194 (333)
T cd06650         142 EIKL-CDFGVSGQLIDS--MANSFVGTRSYMSPERLQGTH-YSVQSDIWSMGLSLVE  194 (333)
T ss_pred             CEEE-eeCCcchhhhhh--ccccCCCCccccCHHHhcCCC-CCcHHHHHHHHHHHHH
Confidence            8999 799998765332  223456888999999997765 7788999999999873

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.95  E-value=3e-28  Score=171.88  Aligned_cols=132  Identities=23%  Similarity=0.309  Sum_probs=111.6

Q ss_pred             ccchhhhccceec-------ceeEEEecc-CCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcc
Q 043346            2 QEMMKSMSLWVHK-------RENLVFEYV-NINLHKFIQQY---HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMN   70 (135)
Q Consensus         2 ~~~~~~~~~~~~~-------~~~lv~e~~-~~~L~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~n   70 (135)
                      .|||+.++..+..       ...++|||| +|||...+.+.   -++++.++..++.++..|+.|||++||+||||||.|
T Consensus        71 ~NIVk~f~iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~N  150 (732)
T KOG4250|consen   71 PNIVKLFDIEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGN  150 (732)
T ss_pred             hhhhhhcccCCccccCcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCc
Confidence            4788887776433       468999999 56999999863   379999999999999999999999999999999999


Q ss_pred             eeeecCC--C-eeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           71 LLADIEN--K-TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        71 il~~~~~--~-~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      |++....  . ..|+ +|||.++...++ ....+.+||..|.+||+.-....++..+|.||+||++|.
T Consensus       151 Ivl~~Gedgq~IyKL-tDfG~Arel~d~-s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~  216 (732)
T KOG4250|consen  151 IVLQIGEDGQSIYKL-TDFGAARELDDN-SLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYE  216 (732)
T ss_pred             EEEeecCCCceEEee-ecccccccCCCC-CeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHH
Confidence            9886322  2 3467 899999988777 477888999999999999754558889999999999984

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.95  E-value=4.8e-28  Score=165.31  Aligned_cols=127  Identities=29%  Similarity=0.505  Sum_probs=105.2

Q ss_pred             ccchhhhcccee-------cceeEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeee
Q 043346            2 QEMMKSMSLWVH-------KRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD   74 (135)
Q Consensus         2 ~~~~~~~~~~~~-------~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~   74 (135)
                      .|++++++.+..       ...+++||++++++.+.+..  .++...+..++.|++.|+.|||++|++||||||+||+++
T Consensus        76 ~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~  153 (355)
T cd07874          76 KNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK  153 (355)
T ss_pred             CchhceeeeeeccccccccceeEEEhhhhcccHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEC
Confidence            356666665532       24689999999888887764  478899999999999999999999999999999999999


Q ss_pred             cCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           75 IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        75 ~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                       .++.+++ +|||+++..... .......+++.|+|||++.+.. ++.++|+||+||++|
T Consensus       154 -~~~~~kl-~Dfg~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~-~~~~~DiwslG~il~  209 (355)
T cd07874         154 -SDCTLKI-LDFGLARTAGTS-FMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMG  209 (355)
T ss_pred             -CCCCEEE-eeCcccccCCCc-cccCCccccCCccCHHHHcCCC-CCchhhHHHHHHHHH
Confidence             6788999 799999765433 2334567889999999997765 778899999999987

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=2e-28  Score=161.92  Aligned_cols=122  Identities=31%  Similarity=0.374  Sum_probs=113.1

Q ss_pred             cceecceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEeccccc
Q 043346           10 LWVHKRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGM   88 (135)
Q Consensus        10 ~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~   88 (135)
                      |.++.+.++|.||.+ |+|.-++++..+++++.+..+...|..|+.|||++||+.||+|.+|++++ ..+.+|+ .|+|+
T Consensus       320 fqtesrlffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlld-aeghikl-tdygm  397 (593)
T KOG0695|consen  320 FQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLD-AEGHIKL-TDYGM  397 (593)
T ss_pred             hcccceEEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEc-cCCceee-cccch
Confidence            346678999999996 59999999888999999999999999999999999999999999999999 6799999 89999


Q ss_pred             ccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           89 AKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ++.-..+....++++|||.|.|||++.+.. ++.++|+|+|||++|
T Consensus       398 cke~l~~gd~tstfcgtpnyiapeilrgee-ygfsvdwwalgvlmf  442 (593)
T KOG0695|consen  398 CKEGLGPGDTTSTFCGTPNYIAPEILRGEE-YGFSVDWWALGVLMF  442 (593)
T ss_pred             hhcCCCCCcccccccCCCcccchhhhcccc-cCceehHHHHHHHHH
Confidence            998877778889999999999999999887 899999999999986

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.95  E-value=2.5e-28  Score=168.69  Aligned_cols=131  Identities=19%  Similarity=0.312  Sum_probs=109.0

Q ss_pred             ccchhhhccc-eecceeEEEeccCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLW-VHKRENLVFEYVNINLHKFIQQYHP-MDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~-~~~~~~lv~e~~~~~L~~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .+||+++++. +++..|+|||+-+.+|.+.+++... .+...+..+..|++.++..+|..||+|.||||.|+++.  .|.
T Consensus       420 ~~IIqL~DYEv~d~~lYmvmE~Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV--kG~  497 (677)
T KOG0596|consen  420 DKIIQLYDYEVTDGYLYMVMECGDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV--KGR  497 (677)
T ss_pred             ceEEEEeeeeccCceEEEEeecccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE--eee
Confidence            3678888888 5669999999888899999988544 34458889999999999999999999999999999988  488


Q ss_pred             eEEecccccccccCCCCC--CCCCCcccccccCcccccCCC----------CCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFD--AHTTEMVILRYRAPKILFGRT----------NCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~----------~~~~~~D~wslg~il~~  135 (135)
                      +|+ +|||.+..+....+  ....-+||+.||+||.+....          ..++++||||||||||+
T Consensus       498 LKL-IDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYq  564 (677)
T KOG0596|consen  498 LKL-IDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQ  564 (677)
T ss_pred             EEe-eeechhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHH
Confidence            999 79999988766543  234568999999999983221          25678999999999995

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.95  E-value=7.7e-28  Score=159.58  Aligned_cols=129  Identities=21%  Similarity=0.290  Sum_probs=106.0

Q ss_pred             cchhhhccc-eecceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            3 EMMKSMSLW-VHKRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         3 ~~~~~~~~~-~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      ++++....+ .++..++||||+. ++|.+++..++.+++..+..++.|++.|++++|+++++|+||+|+||+++ .++.+
T Consensus        58 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~-~~~~~  136 (279)
T cd05633          58 FIVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLD-EHGHV  136 (279)
T ss_pred             cEeEEEEEEecCCeEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEEC-CCCCE
Confidence            345554444 3457899999995 69999998888899999999999999999999999999999999999999 66788


Q ss_pred             EEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           81 KIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ++ +|||++......  ......+++.|+|||.+.+....+.++|+||+||++|+
T Consensus       137 ~l-~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~  188 (279)
T cd05633         137 RI-SDLGLACDFSKK--KPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFK  188 (279)
T ss_pred             EE-ccCCcceecccc--CccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHH
Confidence            99 799998755432  22334688999999998754446788999999999873

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.95  E-value=8.7e-28  Score=160.89  Aligned_cols=130  Identities=26%  Similarity=0.386  Sum_probs=104.5

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcC-------------------CCCHHHHHHHHHHHHHHHHHHhhCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYH-------------------PMDSHLIKKFLYCILSGISYCHARK   60 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~-------------------~~~~~~~~~~~~~i~~~l~~lh~~~   60 (135)
                      .|+++.++++.+. ..+++|||+. ++|.+++....                   .++...+..++.|++.|+.|||+.+
T Consensus        79 ~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~  158 (304)
T cd05096          79 PNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN  158 (304)
T ss_pred             CCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC
Confidence            3677887777544 7899999994 69999986521                   3566788999999999999999999


Q ss_pred             cccCCCCCcceeeecCCCeeEEecccccccccCCCCC--CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           61 IIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFD--AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        61 i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ++|+||||+||+++ ..+.+++ +|||++........  ......++..|+|||++.+.. ++.++|+||||+++|
T Consensus       159 ivH~dlkp~Nill~-~~~~~kl-~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~  231 (304)
T cd05096         159 FVHRDLATRNCLVG-ENLTIKI-ADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGK-FTTASDVWAFGVTLW  231 (304)
T ss_pred             ccccCcchhheEEc-CCccEEE-CCCccceecccCceeEecCcCCCCccccCHHHHhcCC-CCchhhhHHHHHHHH
Confidence            99999999999999 6788999 89999876533211  122334467899999987765 788999999999987

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.95  E-value=7.1e-28  Score=159.57  Aligned_cols=129  Identities=21%  Similarity=0.233  Sum_probs=106.3

Q ss_pred             cchhhhcccee-cceeEEEeccC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            3 EMMKSMSLWVH-KRENLVFEYVN-INLHKFIQQY--HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         3 ~~~~~~~~~~~-~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      |+++..+.+.. ...+++|||+. ++|.+++...  ..++...+..++.|++.|++|||+++++|+||+|+||+++ .++
T Consensus        54 ~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~-~~~  132 (277)
T cd05607          54 FIVNLAYAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLD-DQG  132 (277)
T ss_pred             cEEEEEEEEecCCeEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEc-CCC
Confidence            56677666644 47899999995 6998888653  3588899999999999999999999999999999999999 678


Q ss_pred             eeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           79 TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      .+++ +|||++....... ......+++.|+|||++.+.. ++.++|+||+||++|.
T Consensus       133 ~~~l-~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslGv~l~e  186 (277)
T cd05607         133 NCRL-SDLGLAVELKDGK-TITQRAGTNGYMAPEILKEEP-YSYPVDWFAMGCSIYE  186 (277)
T ss_pred             CEEE-eeceeeeecCCCc-eeeccCCCCCccCHHHHccCC-CCCchhHHHHHHHHHH
Confidence            8899 7999987664432 223456788999999998776 7889999999999873

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.95  E-value=1.5e-27  Score=156.30  Aligned_cols=130  Identities=22%  Similarity=0.317  Sum_probs=107.8

Q ss_pred             ccchhhhccceecceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            2 QEMMKSMSLWVHKRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         2 ~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      .|+++.++++..+..+++||+++ ++|.+++.+...+++..+..++.|++.|++++|+++++|+||+|+||+++ .++.+
T Consensus        56 ~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~-~~~~~  134 (257)
T cd05116          56 PYIVRMIGICEAESWMLVMELAELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLV-TQHYA  134 (257)
T ss_pred             CCcceEEEEEcCCCcEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEc-CCCeE
Confidence            36677777776668899999995 69999998877899999999999999999999999999999999999999 67889


Q ss_pred             EEecccccccccCCCCCC---CCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           81 KIAADSGMAKEIDAPFDA---HTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~~~---~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ++ +|||.+.........   .....++..|+|||.+.+.. .+.++|+||||+++|
T Consensus       135 kl-~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~  189 (257)
T cd05116         135 KI-SDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYK-FSSKSDVWSFGVLMW  189 (257)
T ss_pred             EE-CCCccccccCCCCCeeeecCCCCCCccccCHhHhccCC-cCchhHHHHHHHHHH
Confidence            99 899999866443221   12223356899999986655 678899999999987

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.95  E-value=1.1e-27  Score=161.12  Aligned_cols=131  Identities=32%  Similarity=0.595  Sum_probs=105.6

Q ss_pred             cchhhhccce---ecceeEEEeccCCCHHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcc
Q 043346            3 EMMKSMSLWV---HKRENLVFEYVNINLHKFIQQY---------HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMN   70 (135)
Q Consensus         3 ~~~~~~~~~~---~~~~~lv~e~~~~~L~~~~~~~---------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~n   70 (135)
                      |+++..+.+.   +...++++|+++++|.+++...         ..+++..+..++.|++.|+.|||+++++|+||||+|
T Consensus        59 niv~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~N  138 (317)
T cd07867          59 NVIALQKVFLSHSDRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPAN  138 (317)
T ss_pred             CeeeEEEEEeccCCCeEEEEEeeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHH
Confidence            6677766653   3367899999998998887531         247888999999999999999999999999999999


Q ss_pred             eeee---cCCCeeEEecccccccccCCCCC---CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           71 LLAD---IENKTVKIAADSGMAKEIDAPFD---AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        71 il~~---~~~~~~~i~~d~~~~~~~~~~~~---~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      |++.   ...+.+++ +|||+++.......   ......+|+.|+|||.+.+...++.++|+||+||++|
T Consensus       139 il~~~~~~~~~~~kl-~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~  207 (317)
T cd07867         139 ILVMGEGPERGRVKI-ADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFA  207 (317)
T ss_pred             EEEccCCCCCCcEEE-eeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHH
Confidence            9994   24568899 79999987654322   2234567889999999977655788999999999987

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=4.6e-28  Score=170.60  Aligned_cols=129  Identities=18%  Similarity=0.329  Sum_probs=111.2

Q ss_pred             cchhhhccc-eecceeEEEeccC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            3 EMMKSMSLW-VHKRENLVFEYVN-INLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         3 ~~~~~~~~~-~~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      +++++++.| .++..|++.|+|+ |.....+-+ ...++++++.-+++|++.||.|||+++|+|||||..||++. -.|.
T Consensus        90 ~ivkLl~ayy~enkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~T-ldGd  168 (1187)
T KOG0579|consen   90 VIVKLLSAYYFENKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLT-LDGD  168 (1187)
T ss_pred             HHHHHHHHHhccCceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEE-ecCc
Confidence            578887666 6779999999996 467666655 56899999999999999999999999999999999999999 6688


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccC----CCCCCchhHHHHhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFG----RTNCFAAIDMWAVLYLL  133 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~----~~~~~~~~D~wslg~il  133 (135)
                      +++ +|||.+...........++.|||.|||||+...    ..++..++|+||||++|
T Consensus       169 irL-ADFGVSAKn~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITL  225 (1187)
T KOG0579|consen  169 IRL-ADFGVSAKNKSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITL  225 (1187)
T ss_pred             Eee-ecccccccchhHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHH
Confidence            999 899999987766667788999999999999833    23478899999999886

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.95  E-value=1.4e-27  Score=156.66  Aligned_cols=130  Identities=20%  Similarity=0.305  Sum_probs=106.5

Q ss_pred             ccchhhhccceecceeEEEeccC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHKRENLVFEYVN-INLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|+++.++.+..+..++|||++. ++|.+++.. ...+++..+..++.|++.|+.+||+++++|+||+|+||+++ .++.
T Consensus        55 ~~ii~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~-~~~~  133 (257)
T cd05115          55 PYIVRMIGVCEAEALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLV-NQHY  133 (257)
T ss_pred             CCeEEEEEEEcCCCeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEc-CCCc
Confidence            36777777777778899999995 699999975 45789999999999999999999999999999999999998 6788


Q ss_pred             eEEecccccccccCCCCCC---CCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDA---HTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~---~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +++ +|||++.........   .....++..|+|||.+.+.. .+.++|+||||+++|
T Consensus       134 ~kl-~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~  189 (257)
T cd05115         134 AKI-SDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRK-FSSRSDVWSYGITMW  189 (257)
T ss_pred             EEe-ccCCccccccCCccceeccCCCCCCcccCCHHHHccCC-CCchhhHHHHHHHHH
Confidence            999 899998765433221   11122356799999987665 678899999999987

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.95  E-value=1.7e-27  Score=158.99  Aligned_cols=131  Identities=33%  Similarity=0.594  Sum_probs=111.0

Q ss_pred             ccchhhhccceec-ceeEEEeccCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNINLHKFIQQYH-PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|+++..+.+.+. ..++|||+++++|.+++.... .+++..+..++.|++.|+.+||+++++|+||+|+||+++ .++.
T Consensus        62 ~~i~~~~~~~~~~~~~~lv~e~~~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~-~~~~  140 (298)
T cd07841          62 PNIIGLLDVFGHKSNINLVFEFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIA-SDGV  140 (298)
T ss_pred             CCChhhhheeecCCEEEEEEcccCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEc-CCCC
Confidence            4677887777554 789999999779999998765 799999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +++ .|||++..............+++.|+|||.+.+....+.++|+||+|+++|
T Consensus       141 ~~l-~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~  194 (298)
T cd07841         141 LKL-ADFGLARSFGSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFA  194 (298)
T ss_pred             EEE-ccceeeeeccCCCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHH
Confidence            999 799999876554333444456788999999866555788999999999987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.95  E-value=1.7e-27  Score=154.56  Aligned_cols=128  Identities=20%  Similarity=0.217  Sum_probs=106.8

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      +|+++..+.+.++ ..+++||+++ ++|.+++.+...+++..+..++.|++.|+.+||+++++|+|++|+||+++ ..+.
T Consensus        45 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~-~~~~  123 (237)
T cd05576          45 PNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLD-DRGH  123 (237)
T ss_pred             CceeehhhheecCCeEEEEEecCCCCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEc-CCCC
Confidence            4778888777554 7899999995 69999998877899999999999999999999999999999999999999 6677


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ .|||.+......   .....++..|+|||...+.. .++++|+||+|+++|+
T Consensus       124 ~~l-~df~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslG~il~e  174 (237)
T cd05576         124 IQL-TYFSRWSEVEDS---CDGEAVENMYCAPEVGGISE-ETEACDWWSLGAILFE  174 (237)
T ss_pred             EEE-ecccchhccccc---cccCCcCccccCCcccCCCC-CCchhhHHHHHHHHHH
Confidence            898 799987655432   12234466799999986655 6788999999999874

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.95  E-value=2.3e-27  Score=155.25  Aligned_cols=131  Identities=25%  Similarity=0.455  Sum_probs=112.9

Q ss_pred             ccchhhhccceec-ceeEEEeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      +|++++.+.+.+. ..+++||++++ +|.+++.....++...+..++.|++.|+.+||+++++|+||+|+||+++ ..+.
T Consensus        58 ~~i~~~~~~~~~~~~~~~v~~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~-~~~~  136 (260)
T PF00069_consen   58 PNIVQILDVFQDDNYLYIVMEYCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLD-ENGE  136 (260)
T ss_dssp             TTBCHEEEEEEESSEEEEEEEEETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEES-TTSE
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccc
Confidence            4678888888544 78899999976 9999999778899999999999999999999999999999999999999 7888


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +++ +|||.+..............+++.|+|||+.......+.++|+||+|+++|
T Consensus       137 ~~l-~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~  190 (260)
T PF00069_consen  137 VKL-IDFGSSVKLSENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILY  190 (260)
T ss_dssp             EEE-SSGTTTEESTSTTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHH
T ss_pred             ccc-ccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            999 899998765333345556778899999999973334788999999999987

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.95  E-value=1.8e-27  Score=156.89  Aligned_cols=128  Identities=23%  Similarity=0.346  Sum_probs=107.8

Q ss_pred             ccchhhhccce-ecceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWV-HKRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~-~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|+++.++.+. ++..++||||+. ++|.+++..+..++++.+..++.|++.|+.++|+.+++|+||+|+||+++...+.
T Consensus        69 ~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~  148 (267)
T PHA03390         69 PNFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDR  148 (267)
T ss_pred             CCEEEEEEEEecCCeeEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCe
Confidence            36777776664 448899999995 6999999887789999999999999999999999999999999999999955448


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||.+......    ....++..|+|||++.+.. ++.++|+||+|+++|+
T Consensus       149 ~~l-~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~~-~~~~~DvwslG~il~~  198 (267)
T PHA03390        149 IYL-CDYGLCKIIGTP----SCYDGTLDYFSPEKIKGHN-YDVSFDWWAVGVLTYE  198 (267)
T ss_pred             EEE-ecCccceecCCC----ccCCCCCcccChhhhcCCC-CCchhhHHHHHHHHHH
Confidence            899 799988765432    2345788999999997766 6788999999999873

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.95  E-value=1.7e-27  Score=157.84  Aligned_cols=129  Identities=20%  Similarity=0.279  Sum_probs=106.5

Q ss_pred             cchhhhccce-ecceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            3 EMMKSMSLWV-HKRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         3 ~~~~~~~~~~-~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      ++++....+. ++..++||||+. ++|.+++.+.+.+++..+..++.|++.|+.|||+.+++|+|++|+||+++ .++.+
T Consensus        58 ~i~~~~~~~~~~~~~~~v~e~~~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~-~~~~~  136 (278)
T cd05606          58 FIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD-EHGHV  136 (278)
T ss_pred             cEeeeeeeeecCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEEC-CCCCE
Confidence            4455555553 347889999995 69999998878899999999999999999999999999999999999999 66789


Q ss_pred             EEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           81 KIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ++ +|||++......  ......++..|+|||.+.+....+.++|+||+|+++|+
T Consensus       137 kl-~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~  188 (278)
T cd05606         137 RI-SDLGLACDFSKK--KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK  188 (278)
T ss_pred             EE-ccCcCccccCcc--CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHH
Confidence            99 899998765433  22344688999999999765446788999999999873

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.95  E-value=2.1e-27  Score=158.02  Aligned_cols=130  Identities=33%  Similarity=0.675  Sum_probs=107.8

Q ss_pred             cchhhhccceec-ceeEEEeccCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            3 EMMKSMSLWVHK-RENLVFEYVNINLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         3 ~~~~~~~~~~~~-~~~lv~e~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      |++++.+++..+ ..++||||++++|.+++... ..+++..+..++.|++.|+.|||+++++|+||+|+||+++ .++.+
T Consensus        64 ~i~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~-~~~~~  142 (291)
T cd07844          64 NIVTLHDIIHTKKTLTLVFEYLDTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLIS-ERGEL  142 (291)
T ss_pred             ceeeEEEEEecCCeEEEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEc-CCCCE
Confidence            567777777544 78999999988999988763 4689999999999999999999999999999999999999 67889


Q ss_pred             EEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           81 KIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ++ +|||.+.....+........++..|+|||.+.+....+.++|+||+|+++|
T Consensus       143 kl-~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~  195 (291)
T cd07844         143 KL-ADFGLARAKSVPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFY  195 (291)
T ss_pred             EE-CccccccccCCCCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHH
Confidence            99 899998765433233333456788999999876555778899999999987

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.95  E-value=7.7e-28  Score=169.15  Aligned_cols=128  Identities=20%  Similarity=0.322  Sum_probs=108.0

Q ss_pred             chhh-hccceecceeEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeE
Q 043346            4 MMKS-MSLWVHKRENLVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVK   81 (135)
Q Consensus         4 ~~~~-~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~   81 (135)
                      ||++ |+|..++..|+||+|+ +|++...+.+-+.|+++.+..++.++.+|++..|+.|++||||||+||||+ ..|++|
T Consensus       691 VVrLyySFQDkdnLYFVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILID-rdGHIK  769 (1034)
T KOG0608|consen  691 VVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILID-RDGHIK  769 (1034)
T ss_pred             eEEEEEEeccCCceEEEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEc-cCCcee
Confidence            4566 4566666999999999 579999999989999999999999999999999999999999999999999 679999


Q ss_pred             EecccccccccCC-------------------CCC-----------------------CCCCCcccccccCcccccCCCC
Q 043346           82 IAADSGMAKEIDA-------------------PFD-----------------------AHTTEMVILRYRAPKILFGRTN  119 (135)
Q Consensus        82 i~~d~~~~~~~~~-------------------~~~-----------------------~~~~~~~~~~~~ape~~~~~~~  119 (135)
                      + .|||++.-+-.                   +..                       .....+||+.|+|||++.... 
T Consensus       770 L-TDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g-  847 (1034)
T KOG0608|consen  770 L-TDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTG-  847 (1034)
T ss_pred             e-eeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccC-
Confidence            9 89999954310                   000                       112358899999999997766 


Q ss_pred             CCchhHHHHhhhhhh
Q 043346          120 CFAAIDMWAVLYLLR  134 (135)
Q Consensus       120 ~~~~~D~wslg~il~  134 (135)
                      ++..+|+||.|||||
T Consensus       848 ~~q~cdwws~gvil~  862 (1034)
T KOG0608|consen  848 YTQLCDWWSVGVILY  862 (1034)
T ss_pred             ccccchhhHhhHHHH
Confidence            788899999999998

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.95  E-value=2.5e-27  Score=157.09  Aligned_cols=131  Identities=17%  Similarity=0.231  Sum_probs=108.2

Q ss_pred             ccchhhhccceecceeEEEecc-CCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHKRENLVFEYV-NINLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|+++.++++.....++++|++ +++|.+++.. .+.+++..+..++.|++.|++|+|+++++|+||+|+||+++ .++.
T Consensus        69 ~~iv~~~~~~~~~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~-~~~~  147 (279)
T cd05111          69 AYIVRLLGICPGASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLK-SDSI  147 (279)
T ss_pred             CCcceEEEEECCCccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEc-CCCc
Confidence            4678888887666788999998 5799999976 45789999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCC--CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFD--AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||.++.......  ......++..|++||.+.+.. ++.++|+||||+++|+
T Consensus       148 ~kl-~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~-~~~~~Dv~slG~il~e  203 (279)
T cd05111         148 VQI-ADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGR-YTHQSDVWSYGVTVWE  203 (279)
T ss_pred             EEE-cCCccceeccCCCcccccCCCCCcccccCHHHhccCC-cCchhhHHHHHHHHHH
Confidence            899 89999976533211  122334566899999997766 7889999999999873

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>PHA02988 hypothetical protein; Provisional

Probab=99.95  E-value=1.7e-27  Score=158.36  Aligned_cols=128  Identities=17%  Similarity=0.238  Sum_probs=107.8

Q ss_pred             ccchhhhcccee-----cceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhh-CCcccCCCCCcceeee
Q 043346            2 QEMMKSMSLWVH-----KRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHA-RKIIHRDLTTMNLLAD   74 (135)
Q Consensus         2 ~~~~~~~~~~~~-----~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~~~nil~~   74 (135)
                      .|++++++++.+     ...+++|||++ |+|.+++.+.+.++......++.|++.|+.++|+ .+++||||+|+|++++
T Consensus        78 ~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~  157 (283)
T PHA02988         78 NNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVT  157 (283)
T ss_pred             CCEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEEC
Confidence            478888887755     26789999995 6999999987889999999999999999999998 4899999999999999


Q ss_pred             cCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCC-CCCCchhHHHHhhhhhh
Q 043346           75 IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGR-TNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        75 ~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~~D~wslg~il~  134 (135)
                       +++.+++ +|||++.....+   .....+++.|+|||++.+. ..++.++|+|||||++|
T Consensus       158 -~~~~~kl-~dfg~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~  213 (283)
T PHA02988        158 -ENYKLKI-ICHGLEKILSSP---PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLW  213 (283)
T ss_pred             -CCCcEEE-cccchHhhhccc---cccccCcccccCHHHhhhccccccchhhhhHHHHHHH
Confidence             6788999 899998765433   1234678899999999762 23788999999999987

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.95  E-value=2.1e-27  Score=168.47  Aligned_cols=130  Identities=17%  Similarity=0.301  Sum_probs=107.2

Q ss_pred             ccchhhhccceec-ceeEEEeccCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeec
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNINLHKFIQQY-----HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI   75 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~~L~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~   75 (135)
                      .|++++++++... ..|+++++++++|.+++...     .......+..++.|++.||+|||+++++||||||+||+++ 
T Consensus       223 pnIv~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~-  301 (501)
T PHA03210        223 ENILKIEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLN-  301 (501)
T ss_pred             CCcCcEeEEEEECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC-
Confidence            4788888888554 78899999998999888642     2234567888999999999999999999999999999999 


Q ss_pred             CCCeeEEecccccccccCCCCC-CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           76 ENKTVKIAADSGMAKEIDAPFD-AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        76 ~~~~~~i~~d~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ..+.+++ +|||++..+..... ......|++.|+|||++.+.. ++.++|+|||||++|
T Consensus       302 ~~~~vkL-~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlGvil~  359 (501)
T PHA03210        302 CDGKIVL-GDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDG-YCEITDIWSCGLILL  359 (501)
T ss_pred             CCCCEEE-EeCCCceecCcccccccccccCCcCCCCchhhcCCC-CCcHHHHHHHHHHHH
Confidence            6788999 89999987654322 233467899999999998766 788999999999987

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.95  E-value=1.2e-27  Score=164.48  Aligned_cols=130  Identities=22%  Similarity=0.411  Sum_probs=104.1

Q ss_pred             ccchhhhccceec-ceeEEEecc-CCCHHHHHHhc---------------------------------------------
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYV-NINLHKFIQQY---------------------------------------------   34 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~-~~~L~~~~~~~---------------------------------------------   34 (135)
                      +|+++.++.+... ..+++|||+ +++|.+++.+.                                             
T Consensus       102 ~nIv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (374)
T cd05106         102 KNIVNLLGACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTY  181 (374)
T ss_pred             CceeeEeeEecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccc
Confidence            4678887777444 789999999 46999988642                                             


Q ss_pred             -------------------------CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEecccccc
Q 043346           35 -------------------------HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMA   89 (135)
Q Consensus        35 -------------------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~   89 (135)
                                               .+++...+..++.|++.|+.|||+++++||||||+||+++ +.+.+++ +|||++
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~-~~~~~kL-~DfGla  259 (374)
T cd05106         182 VEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLT-DGRVAKI-CDFGLA  259 (374)
T ss_pred             cccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEe-CCCeEEE-eeceee
Confidence                                     1367788999999999999999999999999999999999 6788999 799998


Q ss_pred             cccCCCCC--CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           90 KEIDAPFD--AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        90 ~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ........  ......++..|+|||++.+.. ++.++|+||+|+++|
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwSlGvil~  305 (374)
T cd05106         260 RDIMNDSNYVVKGNARLPVKWMAPESIFDCV-YTVQSDVWSYGILLW  305 (374)
T ss_pred             eeccCCcceeeccCCCCccceeCHHHhcCCC-CCccccHHHHHHHHH
Confidence            76543321  112223456799999997665 788999999999987

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.95  E-value=3.3e-27  Score=156.50  Aligned_cols=129  Identities=22%  Similarity=0.432  Sum_probs=105.1

Q ss_pred             cchhhhccceec-ceeEEEeccC-CCHHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHhhCCcccC
Q 043346            3 EMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQY----------------HPMDSHLIKKFLYCILSGISYCHARKIIHR   64 (135)
Q Consensus         3 ~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~----------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~   64 (135)
                      |+++..+++.+. ..++++|++. ++|.+++...                ..++...+..++.|++.|+.+||+++++|+
T Consensus        69 ~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~  148 (283)
T cd05048          69 NIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHR  148 (283)
T ss_pred             ccceEEEEEcCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeecc
Confidence            567777776444 7889999995 6999999764                457788999999999999999999999999


Q ss_pred             CCCCcceeeecCCCeeEEecccccccccCCCC--CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           65 DLTTMNLLADIENKTVKIAADSGMAKEIDAPF--DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        65 dl~~~nil~~~~~~~~~i~~d~~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ||+|+||+++ +.+.+++ +|||++.......  .......+++.|+|||.+.+.. .+.++|+||||+++|
T Consensus       149 dlkp~Nil~~-~~~~~~L-~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~sDv~slG~il~  217 (283)
T cd05048         149 DLAARNCLVG-EGLTVKI-SDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGK-FTTESDIWSFGVVLW  217 (283)
T ss_pred             ccccceEEEc-CCCcEEE-CCCcceeeccccccccccCCCcccccccCHHHhccCc-CchhhhHHHHHHHHH
Confidence            9999999999 6788999 8999987653321  1223345577899999987765 788999999999987

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=1.7e-27  Score=158.37  Aligned_cols=129  Identities=22%  Similarity=0.277  Sum_probs=105.7

Q ss_pred             cchhhhccce-ecceeEEEeccC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            3 EMMKSMSLWV-HKRENLVFEYVN-INLHKFIQQY--HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         3 ~~~~~~~~~~-~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      |+++..+.+. ++..+++|||+. ++|.+++...  ..+++..+..++.|++.|+.|||+.+++|+||+|+||+++ +.+
T Consensus        61 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~-~~~  139 (285)
T cd05605          61 FVVSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLD-DYG  139 (285)
T ss_pred             CEeeeeeeecCCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEEC-CCC
Confidence            5566665553 447899999995 6998888652  4689999999999999999999999999999999999999 678


Q ss_pred             eeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           79 TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      .+++ +|||++...... .......+++.|+|||++.+.. .+.++|+||+|+++|+
T Consensus       140 ~~~l-~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~-~~~~~Diws~G~~l~e  193 (285)
T cd05605         140 HIRI-SDLGLAVEIPEG-ETIRGRVGTVGYMAPEVVKNER-YTFSPDWWGLGCLIYE  193 (285)
T ss_pred             CEEE-eeCCCceecCCC-CccccccCCCCccCcHHhcCCC-CCccccchhHHHHHHH
Confidence            8999 799998765332 2223456889999999997765 6788999999999974

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.95  E-value=4e-28  Score=150.57  Aligned_cols=127  Identities=19%  Similarity=0.309  Sum_probs=104.6

Q ss_pred             hhhhccc-eecceeEEEeccCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhhC-CcccCCCCCcceeeecCCC
Q 043346            5 MKSMSLW-VHKRENLVFEYVNINLHKFIQQ----YHPMDSHLIKKFLYCILSGISYCHAR-KIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         5 ~~~~~~~-~~~~~~lv~e~~~~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lh~~-~i~h~dl~~~nil~~~~~~   78 (135)
                      +..|+.. .+...|++||.+..||..|.++    ++..++..+.+++..++.||.|||++ .++|||+||+||+++ ..|
T Consensus       108 V~FyGa~~regdvwIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn-~~G  186 (282)
T KOG0984|consen  108 VHFYGALFREGDVWICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILIN-YDG  186 (282)
T ss_pred             EEeehhhhccccEEEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEc-cCC
Confidence            3444444 3448999999999999888764    67899999999999999999999986 899999999999999 779


Q ss_pred             eeEEecccccccccCCCCCCCCCCcccccccCcccccCC---CCCCchhHHHHhhhhhh
Q 043346           79 TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGR---TNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~---~~~~~~~D~wslg~il~  134 (135)
                      .+|+ +|||.+-.+.+. -..+...|...|||||.+...   ..++-++|+||||+.+.
T Consensus       187 qVKi-CDFGIsG~L~dS-iAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmi  243 (282)
T KOG0984|consen  187 QVKI-CDFGISGYLVDS-IAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMI  243 (282)
T ss_pred             cEEE-cccccceeehhh-hHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhh
Confidence            9999 999998876554 344556788899999999332   24677899999998764

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.95  E-value=2.3e-27  Score=156.23  Aligned_cols=130  Identities=15%  Similarity=0.223  Sum_probs=104.9

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      .|++++.+.+..+ ..++||||++ ++|.+++.+. +.+++..+..++.|++.|++|||+++++|+||+|+||+++ .++
T Consensus        66 ~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~-~~~  144 (266)
T cd05064          66 SNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVN-SDL  144 (266)
T ss_pred             CCcCeEEEEEecCCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEc-CCC
Confidence            3677777776544 8899999995 5999999763 5789999999999999999999999999999999999998 678


Q ss_pred             eeEEecccccccccCCCCC-CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           79 TVKIAADSGMAKEIDAPFD-AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .+++ +|||.+........ ......++..|+|||.+.+.. ++.++|+||+|+++|
T Consensus       145 ~~~l-~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~  199 (266)
T cd05064         145 VCKI-SGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQYHH-FSSASDVWSFGIVMW  199 (266)
T ss_pred             cEEE-CCCcccccccccchhcccCCCCceeecCHHHHhhCC-ccchhHHHHHHHHHH
Confidence            8898 79997765422211 112233456899999997765 788999999999987

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.95  E-value=4.2e-27  Score=154.79  Aligned_cols=128  Identities=20%  Similarity=0.272  Sum_probs=103.5

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      .|++++++++..+ ..+++||+++ ++|..++.+ ...+++.....++.|++.|++|||+++++|+||+|+||+++..+.
T Consensus        64 p~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~  143 (262)
T cd05077          64 KHIVLLYGVCVRDVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGI  143 (262)
T ss_pred             CCEeeEEEEEecCCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCc
Confidence            4778888877544 7889999996 588888875 456899999999999999999999999999999999999973321


Q ss_pred             ------eeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           79 ------TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        79 ------~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                            .+++ +|||.+......    ....++..|+|||.+.+...++.++|+||||+++|
T Consensus       144 ~~~~~~~~~l-~d~g~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~  200 (262)
T cd05077         144 DGECGPFIKL-SDPGIPITVLSR----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLW  200 (262)
T ss_pred             cCCCCceeEe-CCCCCCccccCc----ccccccccccChhhhcCCCCCCchhHHHHHHHHHH
Confidence                  3778 799988654322    23456778999999875555788999999999987

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.95  E-value=2.8e-27  Score=159.32  Aligned_cols=130  Identities=20%  Similarity=0.335  Sum_probs=107.8

Q ss_pred             ccchhhhccceecceeEEEecc-CCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHKRENLVFEYV-NINLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|+++.++.+.....++++|++ +|+|.+++.++ ..++...+..++.|++.|++|||+++++|+||||+||+++ ..+.
T Consensus        69 ~niv~~~g~~~~~~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~-~~~~  147 (316)
T cd05108          69 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVK-TPQH  147 (316)
T ss_pred             CCCCeEEEEEcCCCceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEec-CCCc
Confidence            4778888888777788999999 57999999874 4688899999999999999999999999999999999998 6788


Q ss_pred             eEEecccccccccCCCCCCC--CCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAH--TTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~--~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +++ +|||++..........  .....+..|+|||.+.+.. .+.++|+||||+++|
T Consensus       148 ~kl-~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~-~~~~~Di~slGv~l~  202 (316)
T cd05108         148 VKI-TDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYGVTVW  202 (316)
T ss_pred             EEE-ccccccccccCCCcceeccCCccceeecChHHhccCC-CCchhhhHHHHHHHH
Confidence            999 8999998765432211  1223356799999997765 788999999999987

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.95  E-value=4.4e-27  Score=156.76  Aligned_cols=133  Identities=36%  Similarity=0.685  Sum_probs=108.3

Q ss_pred             ccchhhhccceec-ceeEEEeccCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNINLHKFIQQYH--PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      .|+++..+.+..+ ..++||||++++|.+++....  .+++..+..++.|++.|+++||+++++|+||+|+||+++..++
T Consensus        61 ~~i~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~  140 (294)
T PLN00009         61 GNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTN  140 (294)
T ss_pred             CCEeeEEEEEecCCeEEEEEecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCC
Confidence            3677777777544 889999999889999887643  3578888999999999999999999999999999999986567


Q ss_pred             eeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           79 TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      .+++ +|||++..............+++.|+|||.+.+....+.++|+||+|+++|+
T Consensus       141 ~~kl-~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~  196 (294)
T PLN00009        141 ALKL-ADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAE  196 (294)
T ss_pred             EEEE-cccccccccCCCccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHH
Confidence            7899 8999997654433333444667899999998765557789999999999873

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.95  E-value=2.4e-27  Score=163.04  Aligned_cols=130  Identities=22%  Similarity=0.406  Sum_probs=104.9

Q ss_pred             ccchhhhccceec-ceeEEEecc-CCCHHHHHHhcC--------------------------------------------
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYV-NINLHKFIQQYH--------------------------------------------   35 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~-~~~L~~~~~~~~--------------------------------------------   35 (135)
                      +|++++++.+... ..++||||+ +|+|.+++.+..                                            
T Consensus        99 pnIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  178 (375)
T cd05104          99 INIVNLLGACTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYV  178 (375)
T ss_pred             cceeeeeeeeccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccc
Confidence            4788888877554 789999999 569999986421                                            


Q ss_pred             -------------------------------CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEec
Q 043346           36 -------------------------------PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAA   84 (135)
Q Consensus        36 -------------------------------~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~~   84 (135)
                                                     .+++..+..++.|++.|+.|||+++++|+||||+||+++ .++.+++ +
T Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~-~~~~~kl-~  256 (375)
T cd05104         179 VPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLT-HGRITKI-C  256 (375)
T ss_pred             cccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEE-CCCcEEE-e
Confidence                                           367788899999999999999999999999999999999 6788899 7


Q ss_pred             ccccccccCCCCC--CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           85 DSGMAKEIDAPFD--AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        85 d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      |||++........  ......++..|+|||.+.+.. ++.++|+||||+++|
T Consensus       257 DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~sDi~slG~~l~  307 (375)
T cd05104         257 DFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCV-YTFESDVWSYGILLW  307 (375)
T ss_pred             cCccceeccCcccccccCCCCCCcceeChhHhcCCC-CCCCCCHHHHHHHHH
Confidence            9999876543321  112233456799999997766 788999999999987

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.95  E-value=4.1e-27  Score=154.85  Aligned_cols=130  Identities=22%  Similarity=0.334  Sum_probs=108.1

Q ss_pred             cchhhhcccee-cceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            3 EMMKSMSLWVH-KRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         3 ~~~~~~~~~~~-~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      |+++..+.+.. +..+++||+++ ++|.+++..++++++..+..++.|++.|++|||+.+++|+|++|+||+++ ..+.+
T Consensus        67 ~ii~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~-~~~~~  145 (267)
T cd06646          67 NIVAYFGSYLSREKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLT-DNGDV  145 (267)
T ss_pred             CeeeeeEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEC-CCCCE
Confidence            56777766644 47889999996 59999998878899999999999999999999999999999999999998 67789


Q ss_pred             EEecccccccccCCCCCCCCCCcccccccCcccccC--CCCCCchhHHHHhhhhhh
Q 043346           81 KIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFG--RTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~--~~~~~~~~D~wslg~il~  134 (135)
                      ++ +|||++..............+++.|+|||.+.+  ....+.++|+||+|+++|
T Consensus       146 ~l-~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~  200 (267)
T cd06646         146 KL-ADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAI  200 (267)
T ss_pred             EE-CcCccceeecccccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHH
Confidence            99 799999876544333445578889999998843  223567899999999987

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.95  E-value=1.8e-28  Score=160.01  Aligned_cols=128  Identities=22%  Similarity=0.343  Sum_probs=113.0

Q ss_pred             cchhhhccceec-ceeEEEeccC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            3 EMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         3 ~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      -++|.|+.+..+ ..|+|||||+ |++.+.++. +.+++++++..++++.+.||+|||...-+|||||..||+++ ..+.
T Consensus        89 yVVKYYGSYFK~sDLWIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLN-T~G~  167 (502)
T KOG0574|consen   89 YVVKYYGSYFKHSDLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLN-TDGI  167 (502)
T ss_pred             hhhhhhhhhccCCceEeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEc-ccch
Confidence            367777777554 8999999996 799999985 67899999999999999999999999999999999999999 7789


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLL  133 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il  133 (135)
                      .|+ +|||.+..+.+......+..|||.|||||++..-. +...+|+||||++.
T Consensus       168 AKL-ADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI~EIG-Y~~~ADIWSLGITa  219 (502)
T KOG0574|consen  168 AKL-ADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIEEIG-YDTKADIWSLGITA  219 (502)
T ss_pred             hhh-hhccccchhhhhHHhhCccccCcccccHHHHHHhc-cchhhhHhhhcchh
Confidence            999 89999998877766778889999999999997655 67788999999863

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.95  E-value=3.1e-27  Score=167.32  Aligned_cols=117  Identities=27%  Similarity=0.343  Sum_probs=99.8

Q ss_pred             eeEEEeccC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEeccccccc
Q 043346           16 ENLVFEYVN-INLHKFIQQ----YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAK   90 (135)
Q Consensus        16 ~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~   90 (135)
                      .++||||++ ++|.+++..    ...+++..+..++.|++.|+.|+|+++++||||||+||+++ .++.+++ +|||+++
T Consensus       114 i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~-~~~~vkL-~DFGls~  191 (496)
T PTZ00283        114 IALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLC-SNGLVKL-GDFGFSK  191 (496)
T ss_pred             EEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEe-CCCCEEE-EecccCe
Confidence            579999995 699999865    34689999999999999999999999999999999999999 6788999 7999987


Q ss_pred             ccCCCC--CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           91 EIDAPF--DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        91 ~~~~~~--~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ......  .......||+.|+|||++.+.. ++.++|+||||+++|.
T Consensus       192 ~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~-~s~k~DVwSlGvilye  237 (496)
T PTZ00283        192 MYAATVSDDVGRTFCGTPYYVAPEIWRRKP-YSKKADMFSLGVLLYE  237 (496)
T ss_pred             eccccccccccccccCCcceeCHHHhCCCC-CCcHHHHHHHHHHHHH
Confidence            654321  2234567899999999998766 7889999999999873

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.95  E-value=6.9e-27  Score=152.96  Aligned_cols=128  Identities=19%  Similarity=0.287  Sum_probs=104.9

Q ss_pred             ccchhhhccceecceeEEEeccC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC-
Q 043346            2 QEMMKSMSLWVHKRENLVFEYVN-INLHKFIQQYH-PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK-   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~-   78 (135)
                      .|+++..+.+.....+++||++. ++|.+++.+.. .++...+..++.|++.|++|||+++++|+||+|+||+++.... 
T Consensus        61 ~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~  140 (259)
T cd05037          61 KHLVKLYGVCVRDENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLN  140 (259)
T ss_pred             cchhheeeEEecCCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccc
Confidence            36777777665577899999995 69999998755 7899999999999999999999999999999999999984331 


Q ss_pred             -----eeEEecccccccccCCCCCCCCCCcccccccCcccccCC-CCCCchhHHHHhhhhhh
Q 043346           79 -----TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGR-TNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        79 -----~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~~D~wslg~il~  134 (135)
                           .+++ +|||++.....    .....++..|+|||.+.+. ...+.++|+||+|++++
T Consensus       141 ~~~~~~~kl-~Dfg~a~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~  197 (259)
T cd05037         141 EGYVPFIKL-SDPGIPITVLS----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLL  197 (259)
T ss_pred             cCCceeEEe-CCCCccccccc----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHH
Confidence                 5888 79999876543    2233456679999999776 34788899999999986

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.95  E-value=7e-27  Score=155.57  Aligned_cols=131  Identities=29%  Similarity=0.551  Sum_probs=107.1

Q ss_pred             ccchhhhccceec-ceeEEEeccCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNINLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|+++..+++..+ ..++++|++++++.+++.. ...+++..+..++.|++.|+.+||+.+++|+||+|+||+++ ..+.
T Consensus        63 ~ni~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~-~~~~  141 (291)
T cd07870          63 ANIVLLHDIIHTKETLTFVFEYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLIS-YLGE  141 (291)
T ss_pred             CCEeEEEEEEecCCeEEEEEecccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEc-CCCc
Confidence            3566777766444 7889999998888888765 35678889999999999999999999999999999999998 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +++ +|||++..............+++.|+|||.+.+....+.++|+||+|+++|
T Consensus       142 ~~l-~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~  195 (291)
T cd07870         142 LKL-ADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFI  195 (291)
T ss_pred             EEE-eccccccccCCCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHH
Confidence            999 799998765443333344566889999999976554677899999999987

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.95  E-value=4.9e-27  Score=156.34  Aligned_cols=127  Identities=25%  Similarity=0.372  Sum_probs=109.5

Q ss_pred             ccchhhhccceec-ceeEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|+++.++.+.++ ..+++||++ +++|.+++.+.+.+++..+..++.|++.|+.+||+++++|+||+|+||+++ ..+.
T Consensus        61 ~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~-~~~~  139 (290)
T cd05580          61 PFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLD-SDGY  139 (290)
T ss_pred             CCccceeeEEEcCCeEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEC-CCCC
Confidence            4677887777554 788999999 579999998888899999999999999999999999999999999999999 6688


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +++ +|||++......   .....+++.|+|||.+.+.. .+.++|+||||+++|
T Consensus       140 ~kl-~dfg~~~~~~~~---~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~  189 (290)
T cd05580         140 IKI-TDFGFAKRVKGR---TYTLCGTPEYLAPEIILSKG-YGKAVDWWALGILIY  189 (290)
T ss_pred             EEE-eeCCCccccCCC---CCCCCCCccccChhhhcCCC-CCccccHHHHHHHHH
Confidence            999 799998766443   33446788999999997765 678899999999987

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.95  E-value=4.5e-27  Score=153.72  Aligned_cols=131  Identities=24%  Similarity=0.387  Sum_probs=109.7

Q ss_pred             ccchhhhcccee-cceeEEEecc-CCCHHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcc
Q 043346            2 QEMMKSMSLWVH-KRENLVFEYV-NINLHKFIQQY---------HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMN   70 (135)
Q Consensus         2 ~~~~~~~~~~~~-~~~~lv~e~~-~~~L~~~~~~~---------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~n   70 (135)
                      .++++.++++.. ...+++||++ +++|.+++...         ..+++..+..++.|++.|+.+||+++++|+||+|+|
T Consensus        56 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~n  135 (262)
T cd00192          56 PNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARN  135 (262)
T ss_pred             CChheeeeeecCCCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcce
Confidence            356777766644 4789999999 57999999875         678999999999999999999999999999999999


Q ss_pred             eeeecCCCeeEEecccccccccCCCC--CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           71 LLADIENKTVKIAADSGMAKEIDAPF--DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        71 il~~~~~~~~~i~~d~~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      |+++ .++.+++ +|||.+.......  .......+++.|+|||.+.+.. .+.++|+||+|+++|+
T Consensus       136 ili~-~~~~~~l-~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~  199 (262)
T cd00192         136 CLVG-EDLVVKI-SDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGI-FTSKSDVWSFGVLLWE  199 (262)
T ss_pred             EEEC-CCCcEEE-cccccccccccccccccccCCCcCccccCHHHhccCC-cchhhccHHHHHHHHH
Confidence            9999 6688999 8999998775442  2233455678899999997764 7889999999999873

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.95  E-value=2.5e-27  Score=161.77  Aligned_cols=127  Identities=27%  Similarity=0.444  Sum_probs=102.0

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|+++.++++.++ ..+++|||++ ++|.+.    ...++..+..++.|++.|++|||+++++|+||||+||+++ ..+.
T Consensus       132 ~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~-~~~~  206 (353)
T PLN00034        132 PNVVKCHDMFDHNGEIQVLLEFMDGGSLEGT----HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLIN-SAKN  206 (353)
T ss_pred             CCcceeeeEeccCCeEEEEEecCCCCccccc----ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEc-CCCC
Confidence            3678888877544 7889999995 577542    3456788889999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCC----CCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGR----TNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~----~~~~~~~D~wslg~il~  134 (135)
                      +++ +|||++..............++..|+|||.+...    ...+.++|+|||||++|
T Consensus       207 ~kL-~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~  264 (353)
T PLN00034        207 VKI-ADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSIL  264 (353)
T ss_pred             EEE-cccccceecccccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHH
Confidence            999 8999998765443334556789999999988432    22456899999999987

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.95  E-value=6e-27  Score=153.59  Aligned_cols=129  Identities=15%  Similarity=0.227  Sum_probs=104.8

Q ss_pred             ccchhhhcccee-cceeEEEeccC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVH-KRENLVFEYVN-INLHKFIQQYH-PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~-~~~~lv~e~~~-~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      .|+++.++.+.. ...++||||++ ++|.+++..++ .+++.....++.|++.|+.|||+++++|+||||+||+++.++.
T Consensus        59 ~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~  138 (258)
T cd05078          59 KHLVLNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREED  138 (258)
T ss_pred             CChhheeeEEEeCCCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccc
Confidence            467888877754 48899999995 69999998644 5799999999999999999999999999999999999984432


Q ss_pred             -------eeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           79 -------TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        79 -------~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                             .+++ +|||.+.....    .....+++.|+|||++.+....+.++|+||+|+++|+
T Consensus       139 ~~~~~~~~~~l-~d~g~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~  197 (258)
T cd05078         139 RKTGNPPFIKL-SDPGISITVLP----KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWE  197 (258)
T ss_pred             cccCCCceEEe-cccccccccCC----chhccccCCccCchhccCCCCCCchhhHHHHHHHHHH
Confidence                   2577 79998765432    2334567889999999775556788999999999873

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.95  E-value=7.8e-28  Score=166.53  Aligned_cols=130  Identities=22%  Similarity=0.329  Sum_probs=108.9

Q ss_pred             ccchhhhccceec-ceeEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYV-NINLHKFIQQYH-PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      .||++++++.... -.++|||+| +|+|.+++++++ .++..+...++.+.+.||+|||+++++||||..+|+++. .++
T Consensus       221 ~NVVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~-~~~  299 (474)
T KOG0194|consen  221 PNVVRFYGVAVLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYS-KKG  299 (474)
T ss_pred             CCEEEEEEEEcCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheec-CCC
Confidence            5899999999766 678999999 569999999976 599999999999999999999999999999999999999 667


Q ss_pred             eeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           79 TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .+|+ +|||+++.-...........-...|+|||.+.... ++.++||||+||+++
T Consensus       300 ~vKI-SDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~~-~s~kTDV~sfGV~~~  353 (474)
T KOG0194|consen  300 VVKI-SDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTGI-FSFKTDVWSFGVLLW  353 (474)
T ss_pred             eEEe-CccccccCCcceeeccccccCcceecChhhhccCc-cccccchhheeeeEE
Confidence            7899 89999875432211111223456899999998775 889999999999875

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.95  E-value=5.2e-28  Score=167.28  Aligned_cols=120  Identities=24%  Similarity=0.368  Sum_probs=106.2

Q ss_pred             eecceeEEEeccCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC--CeeEEecccc
Q 043346           12 VHKRENLVFEYVNINLHKFIQ--QYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN--KTVKIAADSG   87 (135)
Q Consensus        12 ~~~~~~lv~e~~~~~L~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~--~~~~i~~d~~   87 (135)
                      +.++.|.|||.+.|+..+.+-  +.+++++...+.++.||+.||+|||-++|+|+|+||+|+++.+..  ..+|+ +|||
T Consensus       634 T~ervFVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKl-CDFG  712 (888)
T KOG4236|consen  634 TPERVFVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKL-CDFG  712 (888)
T ss_pred             CCceEEEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceee-cccc
Confidence            566899999999998777764  367899999999999999999999999999999999999998543  46789 9999


Q ss_pred             cccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           88 MAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +++.++.. ......+|||.|+|||+++++. +.++-|+||+|||+|
T Consensus       713 fARiIgEk-sFRrsVVGTPAYLaPEVLrnkG-yNrSLDMWSVGVIiY  757 (888)
T KOG4236|consen  713 FARIIGEK-SFRRSVVGTPAYLAPEVLRNKG-YNRSLDMWSVGVIIY  757 (888)
T ss_pred             ceeecchh-hhhhhhcCCccccCHHHHhhcc-ccccccceeeeEEEE
Confidence            99988665 5667789999999999998887 788899999999988

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.95  E-value=1.7e-27  Score=155.47  Aligned_cols=132  Identities=30%  Similarity=0.571  Sum_probs=113.2

Q ss_pred             ccchhhhccc-e-ecceeEEEeccCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeee
Q 043346            2 QEMMKSMSLW-V-HKRENLVFEYVNINLHKFIQQ-----YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD   74 (135)
Q Consensus         2 ~~~~~~~~~~-~-~~~~~lv~e~~~~~L~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~   74 (135)
                      .|++.+...+ . +...|+++||.+-+|++.++-     ...++...+..++.|++.|+.|||++=++||||||.||++.
T Consensus        87 ~nvi~Lv~Vfl~~d~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvm  166 (438)
T KOG0666|consen   87 PNVISLVKVFLSHDKKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVM  166 (438)
T ss_pred             CcchhHHHHHhccCceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEe
Confidence            3667776666 3 558999999999999999974     23688999999999999999999999999999999999997


Q ss_pred             cC---CCeeEEecccccccccCCCCCCC---CCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           75 IE---NKTVKIAADSGMAKEIDAPFDAH---TTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        75 ~~---~~~~~i~~d~~~~~~~~~~~~~~---~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .+   .|.+|| +|+|+++.+..+..+.   ...+.|..|.|||.++|...++++.|+||.|||+.
T Consensus       167 gdgperG~VKI-aDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfa  231 (438)
T KOG0666|consen  167 GDGPERGRVKI-ADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFA  231 (438)
T ss_pred             ccCCccCeeEe-ecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHH
Confidence            32   389999 8999999987775543   34567899999999999999999999999999975

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.95  E-value=5.2e-27  Score=153.49  Aligned_cols=131  Identities=20%  Similarity=0.291  Sum_probs=109.1

Q ss_pred             ccchhhhcccee-cceeEEEeccC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC
Q 043346            2 QEMMKSMSLWVH-KRENLVFEYVN-INLHKFIQQ--YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN   77 (135)
Q Consensus         2 ~~~~~~~~~~~~-~~~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~   77 (135)
                      .|++++.+.+.. +..++++||+. ++|.+++..  ...++++.+..++.|++.|+.+||+++++|+||+|+||+++ ++
T Consensus        58 ~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~-~~  136 (255)
T cd08219          58 PNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLT-QN  136 (255)
T ss_pred             CCcceEEEEEEECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEC-CC
Confidence            366777766644 48899999995 699998865  34578999999999999999999999999999999999998 67


Q ss_pred             CeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           78 KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +.+++ +|||.+..............+++.|+|||++.+.. .++++|+||+|+++|+
T Consensus       137 ~~~~l-~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~-~~~~~Dv~slG~i~~~  192 (255)
T cd08219         137 GKVKL-GDFGSARLLTSPGAYACTYVGTPYYVPPEIWENMP-YNNKSDIWSLGCILYE  192 (255)
T ss_pred             CcEEE-cccCcceeecccccccccccCCccccCHHHHccCC-cCchhhhhhhchhhee
Confidence            88899 79999877655444444567888999999997765 7889999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.95  E-value=5.7e-27  Score=153.50  Aligned_cols=130  Identities=22%  Similarity=0.302  Sum_probs=107.8

Q ss_pred             ccchhhhccceecceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            2 QEMMKSMSLWVHKRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         2 ~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      .|+++.++++..+..+++||+++ ++|.+++.+++.+++..+..++.|++.++++||.++++|+||+|+||+++ ..+.+
T Consensus        56 ~~iv~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~-~~~~~  134 (257)
T cd05060          56 PCIVRLIGVCKGEPLMLVMELAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLV-NRHQA  134 (257)
T ss_pred             CCeeeEEEEEcCCceEEEEEeCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEc-CCCcE
Confidence            35677777777678899999995 69999998877899999999999999999999999999999999999999 67889


Q ss_pred             EEecccccccccCCCCCCC---CCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           81 KIAADSGMAKEIDAPFDAH---TTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~~~~---~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ++ +|||.+..........   ....++..|+|||.+.+.. .+.++|+||||+++|
T Consensus       135 kl-~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~  189 (257)
T cd05060         135 KI-SDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGK-FSSKSDVWSYGVTLW  189 (257)
T ss_pred             Ee-ccccccceeecCCcccccccCccccccccCHHHhcCCC-CCccchHHHHHHHHH
Confidence            99 8999988664332221   1122345799999997665 788899999999987

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.95  E-value=4.9e-27  Score=156.90  Aligned_cols=130  Identities=19%  Similarity=0.338  Sum_probs=108.0

Q ss_pred             ccchhhhccce-ecceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWV-HKRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~-~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|+++..+.+. +.+.++||||+. ++|.+++.+ ..+++.++..++.|++.|+.+||+++++|+||+|+||+++ .++.
T Consensus        77 ~~v~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~-~~~~  154 (296)
T cd06654          77 PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG-MDGS  154 (296)
T ss_pred             CCEeeEEEEEEeCCEEEEeecccCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEc-CCCC
Confidence            36677776664 448899999995 699998865 5688999999999999999999999999999999999998 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||.+..............+++.|+|||.+.+.. .+.++|+||+||++|.
T Consensus       155 ~kl-~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~s~Gvil~~  208 (296)
T cd06654         155 VKL-TDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKA-YGPKVDIWSLGIMAIE  208 (296)
T ss_pred             EEE-CccccchhccccccccCcccCCccccCHHHHcCCC-CCccchHHHHHHHHHH
Confidence            999 89999876544433334457888999999997665 6789999999999873

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.95  E-value=6.3e-27  Score=154.99  Aligned_cols=130  Identities=20%  Similarity=0.305  Sum_probs=105.6

Q ss_pred             cchhhhccceecceeEEEeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            3 EMMKSMSLWVHKRENLVFEYVN-INLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         3 ~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      |+++.++.+.....++++|+++ |+|.+++.++ +.+++..+..++.|++.|+.|||+++++|+||+|+||+++ +.+.+
T Consensus        70 ~i~~~~~~~~~~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~-~~~~~  148 (279)
T cd05109          70 YVCRLLGICLTSTVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVK-SPNHV  148 (279)
T ss_pred             CCceEEEEEcCCCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEc-CCCcE
Confidence            5666667666667889999994 7999999773 5689999999999999999999999999999999999998 66788


Q ss_pred             EEecccccccccCCCCCC--CCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           81 KIAADSGMAKEIDAPFDA--HTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~~~--~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ++ +|||+++........  .....+++.|+|||...+.. .+.++|+||||+++|+
T Consensus       149 kL-~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~-~~~~~Di~slG~~l~e  203 (279)
T cd05109         149 KI-TDFGLARLLDIDETEYHADGGKVPIKWMALESILHRR-FTHQSDVWSYGVTVWE  203 (279)
T ss_pred             EE-CCCCceeecccccceeecCCCccchhhCCHHHhccCC-CCchhHHHHHHHHHHH
Confidence            99 899999866433221  11223456799999997665 7788999999999873

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.95  E-value=5.5e-27  Score=155.46  Aligned_cols=132  Identities=29%  Similarity=0.544  Sum_probs=108.4

Q ss_pred             ccchhhhccceec-ceeEEEeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|+++..+.+..+ ..+++|||+++ +|..+......+++..+..++.|++.++.+||+.+++|+||+|+||+++ ..+.
T Consensus        60 ~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~-~~~~  138 (286)
T cd07847          60 PNLVNLIEVFRRKRKLHLVFEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILIT-KQGQ  138 (286)
T ss_pred             CCEeeeeeEEeeCCEEEEEEeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEc-CCCc
Confidence            3677777777544 78999999976 6666666666799999999999999999999999999999999999999 6678


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||++..............++..|+|||.+.+....+.++|+||+|+++|.
T Consensus       139 ~~l-~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~  193 (286)
T cd07847         139 IKL-CDFGFARILTGPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAE  193 (286)
T ss_pred             EEE-CccccceecCCCcccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHH
Confidence            999 8999998765543333445677889999998775556788999999999873

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.95  E-value=7.1e-27  Score=154.92  Aligned_cols=132  Identities=19%  Similarity=0.294  Sum_probs=107.2

Q ss_pred             ccchhhhccce-ecceeEEEeccC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWV-HKRENLVFEYVN-INLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~-~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      +|+++..+.+. ++..++++||+. ++|..++.+ ..++++..+..++.|++.|+.+||+.+++|+||+|+||+++ .++
T Consensus        62 ~~ii~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~-~~~  140 (282)
T cd06643          62 PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFT-LDG  140 (282)
T ss_pred             CCeeeEEEEEeeCCEEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEc-cCC
Confidence            36777776664 447899999995 588887765 45789999999999999999999999999999999999998 678


Q ss_pred             eeEEecccccccccCCCCCCCCCCcccccccCcccccC----CCCCCchhHHHHhhhhhhC
Q 043346           79 TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFG----RTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~----~~~~~~~~D~wslg~il~~  135 (135)
                      .+++ +|||++..............+++.|+|||.+..    ...++.++|+||+||++|+
T Consensus       141 ~~kl-~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~e  200 (282)
T cd06643         141 DIKL-ADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIE  200 (282)
T ss_pred             CEEE-ccccccccccccccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHH
Confidence            8999 899998766544344455678889999999842    2225678999999999873

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.95  E-value=8.2e-27  Score=155.15  Aligned_cols=130  Identities=26%  Similarity=0.431  Sum_probs=105.3

Q ss_pred             ccchhhhcccee-cceeEEEeccC-CCHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHhhCCcccCCC
Q 043346            2 QEMMKSMSLWVH-KRENLVFEYVN-INLHKFIQQYH-------------PMDSHLIKKFLYCILSGISYCHARKIIHRDL   66 (135)
Q Consensus         2 ~~~~~~~~~~~~-~~~~lv~e~~~-~~L~~~~~~~~-------------~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl   66 (135)
                      .++++.++++.. +..++++|+++ ++|.+++...+             .+++..+..++.|++.|+++||+++++||||
T Consensus        67 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dl  146 (288)
T cd05093          67 EHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDL  146 (288)
T ss_pred             CCcceEEEEEecCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccc
Confidence            356777777644 48899999995 69999997533             3899999999999999999999999999999


Q ss_pred             CCcceeeecCCCeeEEecccccccccCCCC--CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           67 TTMNLLADIENKTVKIAADSGMAKEIDAPF--DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        67 ~~~nil~~~~~~~~~i~~d~~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +|+||+++ +.+.+++ +|||.+.......  .......++..|+|||.+.+.. .+.++|+||||+++|
T Consensus       147 kp~Nili~-~~~~~kl-~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~sDiwslG~il~  213 (288)
T cd05093         147 ATRNCLVG-ENLLVKI-GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRK-FTTESDVWSLGVVLW  213 (288)
T ss_pred             CcceEEEc-cCCcEEe-ccCCccccccCCceeecCCCCCccccccCHHHhccCC-CCchhhHHHHHHHHH
Confidence            99999999 6788899 8999987653321  1122334567899999997665 778899999999987

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.95  E-value=8.2e-27  Score=155.34  Aligned_cols=130  Identities=25%  Similarity=0.396  Sum_probs=105.6

Q ss_pred             ccchhhhccceec-ceeEEEecc-CCCHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHhhCCccc
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYV-NINLHKFIQQYH----------------PMDSHLIKKFLYCILSGISYCHARKIIH   63 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~-~~~L~~~~~~~~----------------~~~~~~~~~~~~~i~~~l~~lh~~~i~h   63 (135)
                      .|+++..+++... ..+++||++ +++|.+++..++                .+++..+..++.|++.|+++||+++++|
T Consensus        67 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H  146 (291)
T cd05094          67 EHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVH  146 (291)
T ss_pred             CCcceEEEEEccCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeee
Confidence            3667777777444 789999999 469999997532                3788999999999999999999999999


Q ss_pred             CCCCCcceeeecCCCeeEEecccccccccCCCC--CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           64 RDLTTMNLLADIENKTVKIAADSGMAKEIDAPF--DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        64 ~dl~~~nil~~~~~~~~~i~~d~~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +||+|+||+++ ..+.+++ +|||++.......  .......++..|+|||.+.+.. .+.++|+||+|+++|
T Consensus       147 ~dlkp~Nil~~-~~~~~~l-~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~  216 (291)
T cd05094         147 RDLATRNCLVG-ANLLVKI-GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRK-FTTESDVWSFGVILW  216 (291)
T ss_pred             cccCcceEEEc-cCCcEEE-CCCCcccccCCCceeecCCCCCcceeecChHHhccCC-CCchhhHHHHHHHHH
Confidence            99999999999 6788999 7999987654332  1223345577899999997765 678899999999987

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=7.1e-27  Score=153.29  Aligned_cols=131  Identities=20%  Similarity=0.373  Sum_probs=109.3

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|+++.++++..+ ..++++|++. ++|.+.+.+.+.+++.....++.|++.|+.+||+.+++|+||+|+||+++ .++.
T Consensus        64 ~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~-~~~~  142 (263)
T cd06625          64 ERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRD-SAGN  142 (263)
T ss_pred             CCeeeeEEEEccCCeEEEEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc-CCCC
Confidence            3677787777544 8899999995 59999998878899999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCC-C--CCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDA-H--TTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~-~--~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||++......... .  ....++..|+|||.+.+.. .+.++|+||+|+++|.
T Consensus       143 ~~l-~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~e  199 (263)
T cd06625         143 VKL-GDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEG-YGRKADVWSVGCTVVE  199 (263)
T ss_pred             EEE-eecccceeccccccccccccCCCcCccccCcceeccCC-CCchhhhHHHHHHHHH
Confidence            999 799998765332111 1  3345678899999998766 7789999999999873

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.95  E-value=7.9e-27  Score=155.47  Aligned_cols=133  Identities=34%  Similarity=0.653  Sum_probs=107.7

Q ss_pred             ccchhhhccceec-c-----eeEEEeccCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcc
Q 043346            2 QEMMKSMSLWVHK-R-----ENLVFEYVNINLHKFIQQY-----HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMN   70 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~-----~~lv~e~~~~~L~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~n   70 (135)
                      .|++++.+.+... .     .|++||+++++|.+++...     ..+++..+..++.|++.|+.|||+++++|+||+|+|
T Consensus        61 ~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~n  140 (295)
T cd07837          61 IYIVRLLDVEHVEEKNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQN  140 (295)
T ss_pred             CCccceeeeEeecCCCCCceEEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHH
Confidence            3667777666433 3     6999999988999988652     357999999999999999999999999999999999


Q ss_pred             eeeecCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           71 LLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        71 il~~~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      |+++.+++.+++ +|||.+.....+........+++.|+|||.+.+....+.++|+||+|+++|+
T Consensus       141 il~~~~~~~~kl-~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~  204 (295)
T cd07837         141 LLVDKQKGLLKI-ADLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAE  204 (295)
T ss_pred             EEEecCCCeEEE-eecccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHH
Confidence            999954788999 7999988664443333334567889999998765556889999999999873

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=6.8e-27  Score=153.22  Aligned_cols=132  Identities=22%  Similarity=0.319  Sum_probs=109.4

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      .|+++.++.+..+ ..|++||+++ ++|.+++... .++++..+..++.|++.|+.+||+++++|+|++|+||+++ +.+
T Consensus        60 ~~i~~~~~~~~~~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~-~~~  138 (262)
T cd06613          60 PNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLT-EDG  138 (262)
T ss_pred             CChhceEEEEEeCCEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEEC-CCC
Confidence            3677777776544 7899999996 5999998875 7899999999999999999999999999999999999999 678


Q ss_pred             eeEEecccccccccCCCCCCCCCCcccccccCcccccCC--CCCCchhHHHHhhhhhhC
Q 043346           79 TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGR--TNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~--~~~~~~~D~wslg~il~~  135 (135)
                      .+++ +|||.+..............++..|+|||.+.+.  ...+.++|+||+|+++|.
T Consensus       139 ~~~l-~d~g~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~  196 (262)
T cd06613         139 DVKL-ADFGVSAQLTATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIE  196 (262)
T ss_pred             CEEE-CccccchhhhhhhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHH
Confidence            8999 8999987665433333455678889999998665  136778999999999873

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.95  E-value=9.1e-27  Score=152.17  Aligned_cols=130  Identities=27%  Similarity=0.464  Sum_probs=109.8

Q ss_pred             ccchhhhcccee-cceeEEEeccC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC
Q 043346            2 QEMMKSMSLWVH-KRENLVFEYVN-INLHKFIQQY--HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN   77 (135)
Q Consensus         2 ~~~~~~~~~~~~-~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~   77 (135)
                      .|+++.++.+.+ +..++++|++. ++|.+++...  ..+++..+..++.|++.|+.++|+++++|+|++|+||+++ ..
T Consensus        59 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~-~~  137 (256)
T cd08529          59 SYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLD-AY  137 (256)
T ss_pred             CCeehheeeeccCCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEe-CC
Confidence            367777777644 47899999995 6999999774  5788999999999999999999999999999999999999 66


Q ss_pred             CeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           78 KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +.+++ +|||.+..............+++.|+|||...+.. .+.++|+||||++++
T Consensus       138 ~~~~l-~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~  192 (256)
T cd08529         138 DNVKI-GDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKP-YNEKSDVWALGVVLY  192 (256)
T ss_pred             CCEEE-cccccceeccCccchhhccccCccccCHHHhcCCC-CCCccchHHHHHHHH
Confidence            88899 89999887665544445556788999999998776 678899999999986

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.94  E-value=1.9e-27  Score=165.89  Aligned_cols=127  Identities=23%  Similarity=0.370  Sum_probs=111.4

Q ss_pred             ccchhhhccceec---ceeEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhC--CcccCCCCCcceeeec
Q 043346            2 QEMMKSMSLWVHK---RENLVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHAR--KIIHRDLTTMNLLADI   75 (135)
Q Consensus         2 ~~~~~~~~~~~~~---~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~--~i~h~dl~~~nil~~~   75 (135)
                      .||++.+..|.+.   ...+|+|.+ .|+|.+|.++.+..+...++.|++||+.||.|||++  -|+|||||-+||+++.
T Consensus       101 ~NIirfy~SW~d~~n~~in~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG  180 (632)
T KOG0584|consen  101 PNIIRFYDSWVDTDNKTINFITELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNG  180 (632)
T ss_pred             CceeeeeeheecCCCceeeeeeecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcC
Confidence            5899999999654   467999999 689999999999999999999999999999999997  5999999999999998


Q ss_pred             CCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhh
Q 043346           76 ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLL  133 (135)
Q Consensus        76 ~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il  133 (135)
                      ..|.+|| .|+|+|......  ......|||.|||||+.-..  |...+||||||+++
T Consensus       181 ~~G~VKI-GDLGLAtl~r~s--~aksvIGTPEFMAPEmYEE~--YnE~VDVYaFGMCm  233 (632)
T KOG0584|consen  181 NLGEVKI-GDLGLATLLRKS--HAKSVIGTPEFMAPEMYEEN--YNELVDVYAFGMCM  233 (632)
T ss_pred             CcCceee-cchhHHHHhhcc--ccceeccCccccChHHHhhh--cchhhhhhhhhHHH
Confidence            8899999 699999876443  23337899999999999643  78899999999765

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.94  E-value=5.9e-27  Score=156.26  Aligned_cols=129  Identities=16%  Similarity=0.341  Sum_probs=107.2

Q ss_pred             cchhhhcccee-cceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            3 EMMKSMSLWVH-KRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         3 ~~~~~~~~~~~-~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      |+++..+.+.. +..+++||+++ ++|.+++.. +.+++..+..++.|++.|+.+||+++++|+||+|+||+++ .++.+
T Consensus        80 ~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~-~~~~~  157 (292)
T cd06658          80 NVVDMYNSYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLT-SDGRI  157 (292)
T ss_pred             cHHHHHHheecCCeEEEEEeCCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEc-CCCCE
Confidence            56777766644 48899999995 588887755 5689999999999999999999999999999999999999 66889


Q ss_pred             EEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           81 KIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ++ +|||++..............++..|+|||.+.+.. .+.++|+||+|+++|.
T Consensus       158 kL-~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slGvil~e  210 (292)
T cd06658         158 KL-SDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLP-YGTEVDIWSLGIMVIE  210 (292)
T ss_pred             EE-ccCcchhhcccccccCceeecCccccCHHHHccCC-CCchhhHHHHHHHHHH
Confidence            99 79999876654433444556888999999997665 6788999999999873

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.94  E-value=2.5e-28  Score=180.96  Aligned_cols=130  Identities=24%  Similarity=0.407  Sum_probs=111.8

Q ss_pred             ccchhhhccceec-ceeEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|+++.++...+. ..+++|||| +|+|.+.+...+..++....-+..|++.|+.|||+.||+|||+||.||+++ .++.
T Consensus      1294 pNlV~YyGVEvHRekv~IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld-~~g~ 1372 (1509)
T KOG4645|consen 1294 PNLVRYYGVEVHREKVYIFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLD-FNGL 1372 (1509)
T ss_pred             ccccccCceeecHHHHHHHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeee-cCCc
Confidence            4788888888666 788999999 579999999877778888888999999999999999999999999999999 7789


Q ss_pred             eEEecccccccccCCCC----CCCCCCcccccccCcccccCCC--CCCchhHHHHhhhhh
Q 043346           80 VKIAADSGMAKEIDAPF----DAHTTEMVILRYRAPKILFGRT--NCFAAIDMWAVLYLL  133 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~----~~~~~~~~~~~~~ape~~~~~~--~~~~~~D~wslg~il  133 (135)
                      +|. .|||.+..+..+.    .......||+.|||||++.+..  +...++|+|||||++
T Consensus      1373 iK~-~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVV 1431 (1509)
T KOG4645|consen 1373 IKY-GDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVV 1431 (1509)
T ss_pred             EEe-ecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceE
Confidence            999 6999999886553    2345679999999999996643  356789999999985

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.94  E-value=1.4e-26  Score=153.40  Aligned_cols=132  Identities=34%  Similarity=0.705  Sum_probs=109.6

Q ss_pred             ccchhhhcccee-cceeEEEeccCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVH-KRENLVFEYVNINLHKFIQQYH--PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~-~~~~lv~e~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      .++++..+++.+ +..++++||++++|.+++....  .+++..+..++.|++.|+++||+++++|+|++|+||+++ .++
T Consensus        58 ~~iv~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~-~~~  136 (283)
T cd07835          58 PNIVRLLDVVHSENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLID-REG  136 (283)
T ss_pred             CCccCHhheeccCCeEEEEEeccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEc-CCC
Confidence            367777777754 4889999999889999998754  689999999999999999999999999999999999999 578


Q ss_pred             eeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           79 TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      .+++ .|||.+..............+++.|+|||.+.+....+.++|+||+|+++|.
T Consensus       137 ~~~l-~df~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~  192 (283)
T cd07835         137 ALKL-ADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAE  192 (283)
T ss_pred             cEEE-eecccccccCCCccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHH
Confidence            8999 7999987654443333334567889999988765546788999999999873

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.94  E-value=8e-27  Score=155.43  Aligned_cols=130  Identities=33%  Similarity=0.568  Sum_probs=108.9

Q ss_pred             cchhhhccce-e--cceeEEEeccCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            3 EMMKSMSLWV-H--KRENLVFEYVNINLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         3 ~~~~~~~~~~-~--~~~~lv~e~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      |++++.+++. .  +..|+++|+++++|.+.+... ..+++..+..++.|++.|++|||+++++|+||+|+||+++ .++
T Consensus        65 ni~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~-~~~  143 (293)
T cd07843          65 NIVTVKEVVVGSNLDKIYMVMEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLN-NRG  143 (293)
T ss_pred             CEEEEEEEEEecCCCcEEEEehhcCcCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEEC-CCC
Confidence            5666666653 3  578999999988999988763 4589999999999999999999999999999999999999 678


Q ss_pred             eeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           79 TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .+++ +|||.+..............+++.|+|||.+.+....+.++|+||+|+++|
T Consensus       144 ~~~l-~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~  198 (293)
T cd07843         144 ILKI-CDFGLAREYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFA  198 (293)
T ss_pred             cEEE-eecCceeeccCCccccccccccccccCchhhcCCccccchhhHHHHHHHHH
Confidence            8999 799999877655333444567888999999977655678899999999986

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.94  E-value=1.5e-26  Score=153.10  Aligned_cols=128  Identities=16%  Similarity=0.206  Sum_probs=103.4

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecC--
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE--   76 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~--   76 (135)
                      .|++++++++.++ ..++||||++ ++|..++.+ .+.+++.....++.|++.|++|||+++++|+||||+||+++..  
T Consensus        76 ~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~  155 (274)
T cd05076          76 IHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGL  155 (274)
T ss_pred             CCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCc
Confidence            4778888887554 7889999995 699888875 4578999999999999999999999999999999999999732  


Q ss_pred             ----CCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           77 ----NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        77 ----~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                          ...+++ .|||.+......    ....++..|+|||.+.+....++++|+||||+++|
T Consensus       156 ~~~~~~~~kl-~d~g~~~~~~~~----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~  212 (274)
T cd05076         156 AEGTSPFIKL-SDPGVSFTALSR----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLL  212 (274)
T ss_pred             ccCccceeee-cCCccccccccc----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHH
Confidence                224688 799987644322    22346678999999976555788999999999886

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.94  E-value=1.4e-26  Score=153.51  Aligned_cols=131  Identities=33%  Similarity=0.672  Sum_probs=109.2

Q ss_pred             ccchhhhccceec-ceeEEEeccCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNINLHKFIQQ--YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      .|+++..+++.++ ..+++|||++++|.+++..  ...+++..+..++.|++.|++|||+.+++|+|++|+||+++ .++
T Consensus        59 ~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~-~~~  137 (284)
T cd07860          59 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLIN-TEG  137 (284)
T ss_pred             CCCcchhhhcccCCcEEEEeeccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC-CCC
Confidence            3677887777444 8899999998899998865  35689999999999999999999999999999999999999 678


Q ss_pred             eeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           79 TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .+++ +|||.+..............+++.|+|||...+....+.++|+||||+++|
T Consensus       138 ~~~l-~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~  192 (284)
T cd07860         138 AIKL-ADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFA  192 (284)
T ss_pred             CEEE-eeccchhhcccCccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHH
Confidence            8999 799998766544333344456788999999876654678899999999987

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.94  E-value=3.1e-27  Score=165.08  Aligned_cols=127  Identities=24%  Similarity=0.354  Sum_probs=104.8

Q ss_pred             ccchhhhccceec-ceeEEEeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      +|++++.+.+.++ +.|+|||.++| -+.+.+.....+. .++..|+.+++.++.+||++|++|||+||+||+++.+.+.
T Consensus       376 ~niv~~~~v~~~~~~~~~v~e~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~  454 (612)
T KOG0603|consen  376 PNIVKSHDVYEDGKEIYLVMELLDGGELLRRIRSKPEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGH  454 (612)
T ss_pred             CcceeecceecCCceeeeeehhccccHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCc
Confidence            4778887878555 89999999964 6666666544444 7888999999999999999999999999999999536788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +++ +|||.++.....   ....+-|..|.|||+..... ++.++|+||||++||
T Consensus       455 lrl-tyFG~a~~~~~~---~~tp~~t~~y~APEvl~~~~-yt~acD~WSLGvlLy  504 (612)
T KOG0603|consen  455 LRL-TYFGFWSELERS---CDTPALTLQYVAPEVLAIQE-YTEACDWWSLGVLLY  504 (612)
T ss_pred             EEE-EEechhhhCchh---hcccchhhcccChhhhccCC-CCcchhhHHHHHHHH
Confidence            999 899999876554   33445678899999998555 899999999999998

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=9.4e-27  Score=152.65  Aligned_cols=127  Identities=24%  Similarity=0.323  Sum_probs=108.2

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|+++.++.+.++ ..|+++||++ ++|.+++...+.+++..+..++.|++.|+.++|+.+++|+||+|+||+++ ..+.
T Consensus        57 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~-~~~~  135 (260)
T cd05611          57 PYVAKLYYSFQSKDYLYLVMEYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLID-QTGH  135 (260)
T ss_pred             CCeeeeeeeEEcCCeEEEEEeccCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC-CCCc
Confidence            3677777777544 7899999995 69999998878899999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||++.....    .....+++.|++||.+.+.. .+.++|+||+|+++|+
T Consensus       136 ~~l-~dfg~~~~~~~----~~~~~~~~~y~~pe~~~~~~-~~~~~Dv~slG~il~~  185 (260)
T cd05611         136 LKL-TDFGLSRNGLE----NKKFVGTPDYLAPETILGVG-DDKMSDWWSLGCVIFE  185 (260)
T ss_pred             EEE-eecccceeccc----cccCCCCcCccChhhhcCCC-CcchhhhHHHHHHHHH
Confidence            899 79998875432    23446778899999998766 6788999999999873

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.94  E-value=7.2e-27  Score=153.92  Aligned_cols=131  Identities=19%  Similarity=0.304  Sum_probs=102.2

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeee
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYH-----PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD   74 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~   74 (135)
                      .|+++.++.+.+. ..+++||++. ++|.+++....     ..++..+..++.|++.|++|||+++++|+||||+||+++
T Consensus        55 ~nii~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~  134 (269)
T cd05042          55 PNVLQCLGQCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLT  134 (269)
T ss_pred             CCcceEEEEECCCCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEec
Confidence            4677777766444 7899999995 69999997632     246778899999999999999999999999999999999


Q ss_pred             cCCCeeEEecccccccccCCCC--CCCCCCcccccccCcccccC------CCCCCchhHHHHhhhhhh
Q 043346           75 IENKTVKIAADSGMAKEIDAPF--DAHTTEMVILRYRAPKILFG------RTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        75 ~~~~~~~i~~d~~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~------~~~~~~~~D~wslg~il~  134 (135)
                       .++.+++ +|||++.......  .......+++.|+|||+...      ....+.++|+||+|+++|
T Consensus       135 -~~~~~kl-~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~  200 (269)
T cd05042         135 -ADLSVKI-GDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMW  200 (269)
T ss_pred             -CCCcEEE-eccccccccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHH
Confidence             6788999 7999986543221  11223345667999999743      223577899999999987

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.94  E-value=1.4e-26  Score=153.18  Aligned_cols=131  Identities=24%  Similarity=0.392  Sum_probs=105.8

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcC--------------CCCHHHHHHHHHHHHHHHHHHhhCCcccCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYH--------------PMDSHLIKKFLYCILSGISYCHARKIIHRD   65 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~--------------~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d   65 (135)
                      .|+++.++.+... ..+++||++. ++|.+++..++              .+++..+..++.|++.++.++|+++++|+|
T Consensus        68 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~d  147 (280)
T cd05049          68 ENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRD  147 (280)
T ss_pred             CCchheeeEEecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccc
Confidence            3667777777444 7899999995 69999997642              467889999999999999999999999999


Q ss_pred             CCCcceeeecCCCeeEEecccccccccCCCC--CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           66 LTTMNLLADIENKTVKIAADSGMAKEIDAPF--DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        66 l~~~nil~~~~~~~~~i~~d~~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      |+|+||+++ ..+.+++ +|||.+.......  .......+++.|+|||.+.+.. +++++|+||||+++|+
T Consensus       148 lkp~nili~-~~~~~kl-~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~e  216 (280)
T cd05049         148 LATRNCLVG-YDLVVKI-GDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRK-FTTESDVWSFGVVLWE  216 (280)
T ss_pred             cccceEEEc-CCCeEEE-CCcccceecccCcceecCCCCcccceecChhhhccCC-cchhhhHHHHHHHHHH
Confidence            999999999 6788999 8999987543221  1223334567899999997766 7888999999999873

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.94  E-value=1.3e-26  Score=151.61  Aligned_cols=130  Identities=18%  Similarity=0.339  Sum_probs=107.1

Q ss_pred             cchhhhcccee-c-ceeEEEeccC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC
Q 043346            3 EMMKSMSLWVH-K-RENLVFEYVN-INLHKFIQQ--YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN   77 (135)
Q Consensus         3 ~~~~~~~~~~~-~-~~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~   77 (135)
                      |+++..+.+.. + ..++++|++. ++|.+++..  ...+++.++..++.|++.++.++|+++++|+||+|+||+++ ..
T Consensus        60 ~i~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~-~~  138 (257)
T cd08223          60 NIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLT-RT  138 (257)
T ss_pred             CeeeeeeeecCCCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEe-cC
Confidence            56666655532 2 5789999995 699999976  34589999999999999999999999999999999999998 67


Q ss_pred             CeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           78 KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +.+++ .|||++..............+++.|+|||...+.. .+.++|+||+|+++|+
T Consensus       139 ~~~~l-~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~~  194 (257)
T cd08223         139 NIIKV-GDLGIARVLENQCDMASTLIGTPYYMSPELFSNKP-YNYKSDVWALGCCVYE  194 (257)
T ss_pred             CcEEE-ecccceEEecccCCccccccCCcCccChhHhcCCC-CCchhhhHHHHHHHHH
Confidence            88999 79999887654434445566788999999997765 6788999999999873

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.94  E-value=6.1e-27  Score=156.89  Aligned_cols=129  Identities=26%  Similarity=0.367  Sum_probs=103.0

Q ss_pred             ccchhhhcccee-cceeEEEecc-CCCHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHhhCCccc
Q 043346            2 QEMMKSMSLWVH-KRENLVFEYV-NINLHKFIQQYH----------------PMDSHLIKKFLYCILSGISYCHARKIIH   63 (135)
Q Consensus         2 ~~~~~~~~~~~~-~~~~lv~e~~-~~~L~~~~~~~~----------------~~~~~~~~~~~~~i~~~l~~lh~~~i~h   63 (135)
                      .|++++.+.+.. +..|++|||+ +++|.+++.+.+                .+++..+..++.|++.|+++||++|++|
T Consensus        68 ~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H  147 (303)
T cd05088          68 PNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIH  147 (303)
T ss_pred             CCcceEEEEECCCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence            467777777644 4789999999 469999997532                4688899999999999999999999999


Q ss_pred             CCCCCcceeeecCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           64 RDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        64 ~dl~~~nil~~~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +||+|+|++++ ..+.+++ +|||++...... ........+..|+|||...+.. .+.++|+||||+++|
T Consensus       148 ~dlkp~Nili~-~~~~~kl-~dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~  214 (303)
T cd05088         148 RDLAARNILVG-ENYVAKI-ADFGLSRGQEVY-VKKTMGRLPVRWMAIESLNYSV-YTTNSDVWSYGVLLW  214 (303)
T ss_pred             cccchheEEec-CCCcEEe-CccccCcccchh-hhcccCCCcccccCHHHHhccC-CcccccchhhhhHHH
Confidence            99999999999 6678999 899998643221 1112223356799999987665 678899999999987

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.94  E-value=9.4e-27  Score=155.59  Aligned_cols=130  Identities=19%  Similarity=0.338  Sum_probs=108.5

Q ss_pred             ccchhhhcccee-cceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVH-KRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~-~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|+++.++.+.. +..++|||++. ++|.+++.+ ..+++..+..++.|++.++.+||+.+++|+||+|+||+++ .++.
T Consensus        76 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~-~~~~  153 (297)
T cd06656          76 PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLG-MDGS  153 (297)
T ss_pred             CCEeeEEEEEecCCEEEEeecccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC-CCCC
Confidence            366777776644 47899999995 699999876 5688999999999999999999999999999999999998 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||.+..............+++.|+|||.+.+.. .+.++|+||+|+++|+
T Consensus       154 ~~l-~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slGvil~~  207 (297)
T cd06656         154 VKL-TDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKA-YGPKVDIWSLGIMAIE  207 (297)
T ss_pred             EEE-CcCccceEccCCccCcCcccCCccccCHHHHcCCC-CCcHHHHHHHHHHHHH
Confidence            999 89999876654433344556788999999997765 6789999999999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.94  E-value=3e-27  Score=169.41  Aligned_cols=130  Identities=23%  Similarity=0.429  Sum_probs=110.9

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcC----------C----CCHHHHHHHHHHHHHHHHHHhhCCcccCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYH----------P----MDSHLIKKFLYCILSGISYCHARKIIHRD   65 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~----------~----~~~~~~~~~~~~i~~~l~~lh~~~i~h~d   65 (135)
                      +|||++++.+.++ -.++|+||+. |||.+|+....          .    ++..+++.++.||+.||.||.++.++|||
T Consensus       549 ~nIVrLlGVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRD  628 (774)
T KOG1026|consen  549 PNIVRLLGVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRD  628 (774)
T ss_pred             CCeEEEEEEEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccc
Confidence            5899999999777 6679999994 89999997522          2    77889999999999999999999999999


Q ss_pred             CCCcceeeecCCCeeEEecccccccccCCCC--CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           66 LTTMNLLADIENKTVKIAADSGMAKEIDAPF--DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        66 l~~~nil~~~~~~~~~i~~d~~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      |.++|.+++ ++..+|| +|||+++...+..  .......-...||+||.+..+. ++.++||||+||+|.
T Consensus       629 LATRNCLVg-e~l~VKI-sDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~k-FTteSDVWs~GVvLW  696 (774)
T KOG1026|consen  629 LATRNCLVG-ENLVVKI-SDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGK-FTTESDVWSFGVVLW  696 (774)
T ss_pred             hhhhhceec-cceEEEe-cccccchhhhhhhhhcccCCceeeeecCCHHHhhcCc-ccchhhhhhhhhhhh
Confidence            999999999 8899999 8999999875432  2222334467899999998877 889999999999985

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.94  E-value=1.8e-26  Score=154.18  Aligned_cols=129  Identities=24%  Similarity=0.367  Sum_probs=102.6

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHhhCCccc
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYH----------------PMDSHLIKKFLYCILSGISYCHARKIIH   63 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~----------------~~~~~~~~~~~~~i~~~l~~lh~~~i~h   63 (135)
                      .|++++.+.+... ..++++|++. ++|.+++.+..                .++...+..++.|++.|+++||+++++|
T Consensus        63 p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH  142 (297)
T cd05089          63 PNIINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIH  142 (297)
T ss_pred             CchhheEEEEccCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence            3677777776444 7899999994 69999997532                4778899999999999999999999999


Q ss_pred             CCCCCcceeeecCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           64 RDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        64 ~dl~~~nil~~~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +||||+||+++ .++.+++ +|||++....... .......+..|+|||...+.. ++.++|+||||+++|
T Consensus       143 ~dlkp~Nill~-~~~~~kl-~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwSlG~il~  209 (297)
T cd05089         143 RDLAARNVLVG-ENLASKI-ADFGLSRGEEVYV-KKTMGRLPVRWMAIESLNYSV-YTTKSDVWSFGVLLW  209 (297)
T ss_pred             CcCCcceEEEC-CCCeEEE-CCcCCCcccccee-ccCCCCcCccccCchhhccCC-CCchhhHHHHHHHHH
Confidence            99999999998 6788899 7999986432211 112222345699999987765 678999999999987

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.94  E-value=1.4e-26  Score=153.22  Aligned_cols=130  Identities=22%  Similarity=0.351  Sum_probs=103.2

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCc
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYH----------PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTM   69 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~----------~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~   69 (135)
                      .|++++.+.+.++ ..+++|||+. ++|.+++.+..          .++...+..++.|++.|+.|||+++++|+||+|+
T Consensus        69 ~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~  148 (277)
T cd05062          69 HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAAR  148 (277)
T ss_pred             CCeeeEEEEEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchh
Confidence            3677777766444 7889999995 69999987522          2466788999999999999999999999999999


Q ss_pred             ceeeecCCCeeEEecccccccccCCCCCC--CCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           70 NLLADIENKTVKIAADSGMAKEIDAPFDA--HTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        70 nil~~~~~~~~~i~~d~~~~~~~~~~~~~--~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ||+++ ..+.+++ +|||++.........  .....+++.|+|||.+.+.. .+.++|+||||+++|
T Consensus       149 Nil~~-~~~~~~l-~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~  212 (277)
T cd05062         149 NCMVA-EDFTVKI-GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGV-FTTYSDVWSFGVVLW  212 (277)
T ss_pred             eEEEc-CCCCEEE-CCCCCccccCCcceeecCCCCccCHhhcChhHhhcCC-cCchhHHHHHHHHHH
Confidence            99999 6788899 899998755332211  12234467899999997765 788999999999987

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.94  E-value=1.4e-26  Score=155.07  Aligned_cols=131  Identities=25%  Similarity=0.423  Sum_probs=104.9

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHhhCCccc
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQY----------------HPMDSHLIKKFLYCILSGISYCHARKIIH   63 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~----------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h   63 (135)
                      .|+++.++.+... ..+++||++. ++|.+++.+.                ..++...+..++.|++.|+.|||++|++|
T Consensus        81 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH  160 (304)
T cd05101          81 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIH  160 (304)
T ss_pred             CCchheeEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeee
Confidence            3677777777544 7889999995 6999999763                23667788999999999999999999999


Q ss_pred             CCCCCcceeeecCCCeeEEecccccccccCCCCCC--CCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           64 RDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDA--HTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        64 ~dl~~~nil~~~~~~~~~i~~d~~~~~~~~~~~~~--~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +||||+||+++ .++.+++ +|||.+.........  .....+++.|+|||++.+.. ++.++|+||||+++|+
T Consensus       161 ~dlkp~Nili~-~~~~~kl-~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~e  231 (304)
T cd05101         161 RDLAARNVLVT-ENNVMKI-ADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWE  231 (304)
T ss_pred             cccccceEEEc-CCCcEEE-CCCccceecccccccccccCCCCCceeeCchhhccCC-CCchhhHHHHHHHHHH
Confidence            99999999998 6788999 799998866433221  22234567899999997765 6788999999999873

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.94  E-value=1.4e-26  Score=152.64  Aligned_cols=132  Identities=22%  Similarity=0.333  Sum_probs=106.8

Q ss_pred             ccchhhhcccee-------cceeEEEeccC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcce
Q 043346            2 QEMMKSMSLWVH-------KRENLVFEYVN-INLHKFIQQY--HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNL   71 (135)
Q Consensus         2 ~~~~~~~~~~~~-------~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~ni   71 (135)
                      +|+++..+.+..       ...|++||++. ++|.+++...  ..+++..+..++.|++.|+.|||+++++|+|++|+||
T Consensus        63 ~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~ni  142 (272)
T cd06637          63 RNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNV  142 (272)
T ss_pred             CCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHE
Confidence            366666666542       35789999995 6999998863  4688999999999999999999999999999999999


Q ss_pred             eeecCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCC----CCCCchhHHHHhhhhhhC
Q 043346           72 LADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGR----TNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        72 l~~~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~----~~~~~~~D~wslg~il~~  135 (135)
                      +++ +++.+++ +|||++..............+++.|+|||++.+.    ..++.++|+||+||++|.
T Consensus       143 li~-~~~~~~l-~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~e  208 (272)
T cd06637         143 LLT-ENAEVKL-VDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIE  208 (272)
T ss_pred             EEC-CCCCEEE-ccCCCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHH
Confidence            999 6788999 8999987654443344556788899999998532    236678999999999873

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.94  E-value=1.4e-26  Score=160.29  Aligned_cols=95  Identities=25%  Similarity=0.479  Sum_probs=78.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEecccccccccCCCCC--CCCCCcccccccCcccc
Q 043346           37 MDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFD--AHTTEMVILRYRAPKIL  114 (135)
Q Consensus        37 ~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~  114 (135)
                      ++...+..++.|++.|+.|||+.+++|+||||+||+++ .++.+++ +|||++........  ......+++.|+|||.+
T Consensus       234 l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~-~~~~~kL-~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~  311 (400)
T cd05105         234 LTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLA-QGKIVKI-CDFGLARDIMHDSNYVSKGSTFLPVKWMAPESI  311 (400)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEe-CCCEEEE-EeCCcceeccccccccccCCcCCCcceEChhhh
Confidence            66777889999999999999999999999999999999 6788999 79999876543221  22234566789999999


Q ss_pred             cCCCCCCchhHHHHhhhhhh
Q 043346          115 FGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus       115 ~~~~~~~~~~D~wslg~il~  134 (135)
                      .+.. ++.++|+||||+++|
T Consensus       312 ~~~~-~~~~~DiwSlGvil~  330 (400)
T cd05105         312 FDNL-YTTLSDVWSYGILLW  330 (400)
T ss_pred             cCCC-CCchhhHHHHHHHHH
Confidence            7765 688999999999987

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.94  E-value=1.1e-26  Score=154.05  Aligned_cols=132  Identities=34%  Similarity=0.609  Sum_probs=108.7

Q ss_pred             ccchhhhccceec-ceeEEEeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++.+.+..+ ..++++||+++ +|..+......+++..+..++.|++.++.|||+.+++|+|++|+||+++ +++.
T Consensus        60 ~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~-~~~~  138 (286)
T cd07846          60 ENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVS-QSGV  138 (286)
T ss_pred             cchhhHHHhcccCCeEEEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEC-CCCc
Confidence            3677787777544 78999999975 6666666656789999999999999999999999999999999999998 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||++..............++..|+|||...+....+.++|+||+|+++|+
T Consensus       139 ~~l-~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~e  193 (286)
T cd07846         139 VKL-CDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTE  193 (286)
T ss_pred             EEE-EeeeeeeeccCCccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHH
Confidence            899 7999988765443444445678899999998765556788999999999873

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.94  E-value=1.3e-26  Score=170.85  Aligned_cols=130  Identities=20%  Similarity=0.239  Sum_probs=104.1

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhc-----------CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQY-----------HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTT   68 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~-----------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~   68 (135)
                      .|+++.++.+.++ ..+++||+++ ++|.+++...           ...+...+..++.|++.|++|+|++|++||||||
T Consensus        62 PNIVkl~~v~~d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKP  141 (932)
T PRK13184         62 PGIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKP  141 (932)
T ss_pred             cCcCeEEEEEeeCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCch
Confidence            4677887777554 7899999995 5999988641           2344567888999999999999999999999999


Q ss_pred             cceeeecCCCeeEEecccccccccCCCC------------------CCCCCCcccccccCcccccCCCCCCchhHHHHhh
Q 043346           69 MNLLADIENKTVKIAADSGMAKEIDAPF------------------DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVL  130 (135)
Q Consensus        69 ~nil~~~~~~~~~i~~d~~~~~~~~~~~------------------~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg  130 (135)
                      +||+++ ..+.+++ +|||++.......                  .......||+.|+|||.+.+.. .+.++|+||+|
T Consensus       142 eNILLd-~dg~vKL-iDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~-~S~kSDIWSLG  218 (932)
T PRK13184        142 DNILLG-LFGEVVI-LDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVP-ASESTDIYALG  218 (932)
T ss_pred             heEEEc-CCCCEEE-EecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCC-CCcHhHHHHHH
Confidence            999999 6678899 7999997652110                  1112346899999999998776 68899999999


Q ss_pred             hhhh
Q 043346          131 YLLR  134 (135)
Q Consensus       131 ~il~  134 (135)
                      |++|
T Consensus       219 VILy  222 (932)
T PRK13184        219 VILY  222 (932)
T ss_pred             HHHH
Confidence            9987

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=1.2e-26  Score=153.41  Aligned_cols=131  Identities=19%  Similarity=0.343  Sum_probs=109.9

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|+++..+.+.++ ..+++||++. ++|.+++.. +.+++..+..++.|++.++.++|+.+++|+||+|+||+++ ..+.
T Consensus        62 ~~vi~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~-~~~~  139 (277)
T cd06917          62 PNITKYYGSYLKGPRLWIIMEYAEGGSVRTLMKA-GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVT-NTGN  139 (277)
T ss_pred             CCeeeEeeeeeeCCEEEEEEecCCCCcHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEc-CCCC
Confidence            3567777666444 7889999995 599998866 5789999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||.+..............++..|+|||.+.+....+.++|+||+|+++|.
T Consensus       140 ~~l-~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~  194 (277)
T cd06917         140 VKL-CDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYE  194 (277)
T ss_pred             EEE-ccCCceeecCCCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHH
Confidence            999 8999998776554444556788899999998765546788999999999873

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.94  E-value=7.3e-27  Score=155.32  Aligned_cols=129  Identities=21%  Similarity=0.266  Sum_probs=103.9

Q ss_pred             cchhhhccc-eecceeEEEeccC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            3 EMMKSMSLW-VHKRENLVFEYVN-INLHKFIQQY--HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         3 ~~~~~~~~~-~~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      +++.....+ .++..+++||++. ++|.+++...  ..+++..+..++.|++.|+.|+|+.+++|+||+|+||+++ ..+
T Consensus        61 ~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~-~~~  139 (285)
T cd05630          61 FVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLD-DHG  139 (285)
T ss_pred             CeeeeeEEEecCCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEEC-CCC
Confidence            344454444 3447889999995 6999988653  3689999999999999999999999999999999999999 667


Q ss_pred             eeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           79 TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      .+++ +|||++....... ......++..|+|||.+.+.. ++.++|+||+|+++|+
T Consensus       140 ~~~l-~Dfg~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~-~~~~~DiwslG~~l~~  193 (285)
T cd05630         140 HIRI-SDLGLAVHVPEGQ-TIKGRVGTVGYMAPEVVKNER-YTFSPDWWALGCLLYE  193 (285)
T ss_pred             CEEE-eeccceeecCCCc-cccCCCCCccccChHHHcCCC-CCCccccHHHHHHHHH
Confidence            7899 7999987553322 223346889999999998766 7788999999999873

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.94  E-value=1.5e-26  Score=152.56  Aligned_cols=129  Identities=26%  Similarity=0.377  Sum_probs=102.5

Q ss_pred             ccchhhhccceec-ceeEEEecc-CCCHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHhhCCccc
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYV-NINLHKFIQQYH----------------PMDSHLIKKFLYCILSGISYCHARKIIH   63 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~-~~~L~~~~~~~~----------------~~~~~~~~~~~~~i~~~l~~lh~~~i~h   63 (135)
                      .|++++++.+... ..+++||++ +++|.+++.++.                .++.+.+..++.|++.|++|||+++++|
T Consensus        56 ~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H  135 (270)
T cd05047          56 PNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIH  135 (270)
T ss_pred             CCeeeEEEEEecCCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEee
Confidence            3677777776444 789999999 579999997532                3678899999999999999999999999


Q ss_pred             CCCCCcceeeecCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           64 RDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        64 ~dl~~~nil~~~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +||+|+||+++ ..+.+++ +|||++...... ........+..|+|||.+.+.. .+.++|+||||+++|
T Consensus       136 ~dikp~nili~-~~~~~kl-~dfgl~~~~~~~-~~~~~~~~~~~y~apE~~~~~~-~~~~~Di~slG~il~  202 (270)
T cd05047         136 RDLAARNILVG-ENYVAKI-ADFGLSRGQEVY-VKKTMGRLPVRWMAIESLNYSV-YTTNSDVWSYGVLLW  202 (270)
T ss_pred             cccccceEEEc-CCCeEEE-CCCCCccccchh-hhccCCCCccccCChHHHccCC-CCchhhHHHHHHHHH
Confidence            99999999999 6788999 899988633221 1112223356799999986655 778999999999986

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.94  E-value=1.7e-26  Score=151.81  Aligned_cols=131  Identities=21%  Similarity=0.329  Sum_probs=105.4

Q ss_pred             ccchhhhcccee-cceeEEEecc-CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC
Q 043346            2 QEMMKSMSLWVH-KRENLVFEYV-NINLHKFIQQY--HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN   77 (135)
Q Consensus         2 ~~~~~~~~~~~~-~~~~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~   77 (135)
                      .|+++.++.+.. +..+++||++ +++|.+++...  ..+++..+..++.|++.++.+||+++++|+||+|+||+++ ++
T Consensus        62 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~-~~  140 (263)
T cd05052          62 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG-EN  140 (263)
T ss_pred             CChhheEEEEcCCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEc-CC
Confidence            356777776644 4788999999 46999999763  3588999999999999999999999999999999999998 77


Q ss_pred             CeeEEecccccccccCCCCCCC-CCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           78 KTVKIAADSGMAKEIDAPFDAH-TTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~~~-~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +.+++ +|||.+.......... .....+..|+|||.+.+.. .+.++|+||||+++|.
T Consensus       141 ~~~kl-~df~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~e  197 (263)
T cd05052         141 HLVKV-ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK-FSIKSDVWAFGVLLWE  197 (263)
T ss_pred             CcEEe-CCCccccccccceeeccCCCCCccccCCHHHhccCC-CCchhHHHHHHHHHHH
Confidence            88999 7999988765432211 2223356799999987766 6788999999999873

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.94  E-value=2.2e-26  Score=153.79  Aligned_cols=130  Identities=20%  Similarity=0.337  Sum_probs=108.0

Q ss_pred             ccchhhhcccee-cceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVH-KRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~-~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|+++..+.+.. +..++++|++. ++|.+++.. ..+++..+..++.|++.++.+||+.+++|+||+|+||+++ .++.
T Consensus        76 ~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~-~~~~  153 (296)
T cd06655          76 PNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVTE-TCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLG-MDGS  153 (296)
T ss_pred             CceeeeeeeEecCceEEEEEEecCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC-CCCC
Confidence            366777766644 48899999995 599998876 4689999999999999999999999999999999999998 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||++..............++..|+|||.+.+.. .+.++|+||+||++|.
T Consensus       154 ~kl-~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slGvil~~  207 (296)
T cd06655         154 VKL-TDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKA-YGPKVDIWSLGIMAIE  207 (296)
T ss_pred             EEE-ccCccchhcccccccCCCcCCCccccCcchhcCCC-CCchhhHHHHHHHHHH
Confidence            999 79999876654433334456788999999997665 6788999999999873

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.94  E-value=1.7e-26  Score=153.08  Aligned_cols=132  Identities=29%  Similarity=0.523  Sum_probs=109.8

Q ss_pred             ccchhhhccceec-ceeEEEeccCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNINLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++.+.+... ..++|+|+++++|.+++.. ...+++..+..++.|++.++.+||+.+++|+||+|+||+++ ..+.
T Consensus        59 ~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~-~~~~  137 (286)
T cd07832          59 PYVVKLLDVFPHGSGFVLVMEYMPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLIS-ADGV  137 (286)
T ss_pred             CCCcceeeEEecCCeeEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEc-CCCc
Confidence            3677777777544 7889999997799999875 45789999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCC-CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFD-AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||.+........ ......++..|+|||.+.+....+.++|+||+|+++|+
T Consensus       138 ~~l-~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~  193 (286)
T cd07832         138 LKI-ADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAE  193 (286)
T ss_pred             EEE-eeeeecccccCCCCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHH
Confidence            899 79999887654321 23345678899999998766556889999999999874

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.94  E-value=1.7e-26  Score=154.97  Aligned_cols=131  Identities=35%  Similarity=0.551  Sum_probs=108.4

Q ss_pred             cchhhhcccee---cceeEEEeccCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            3 EMMKSMSLWVH---KRENLVFEYVNINLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         3 ~~~~~~~~~~~---~~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      |+++..+++.+   +..++|||+++++|.+++.. ...+++..+..++.|++.|+.+||+++++|+||+|+||+++ ..+
T Consensus        67 ~i~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~-~~~  145 (309)
T cd07845          67 NIVELKEVVVGKHLDSIFLVMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLT-DKG  145 (309)
T ss_pred             CCcceEEEEecCCCCeEEEEEecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC-CCC
Confidence            56677766643   25789999999899998876 46789999999999999999999999999999999999999 678


Q ss_pred             eeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           79 TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      .+++ +|||.+..............+++.|+|||.+.+....+.++|+||+|+++|.
T Consensus       146 ~~kL-~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~e  201 (309)
T cd07845         146 CLKI-ADFGLARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAE  201 (309)
T ss_pred             CEEE-CccceeeecCCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHH
Confidence            8999 8999998765443333334457789999999775557889999999999873

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.94  E-value=1.5e-26  Score=154.22  Aligned_cols=129  Identities=23%  Similarity=0.328  Sum_probs=106.1

Q ss_pred             cchhhhcccee-cceeEEEeccC-CCHHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCc
Q 043346            3 EMMKSMSLWVH-KRENLVFEYVN-INLHKFIQQYH-----------PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTM   69 (135)
Q Consensus         3 ~~~~~~~~~~~-~~~~lv~e~~~-~~L~~~~~~~~-----------~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~   69 (135)
                      |++++.+++.. ...++++|++. ++|.+++.+..           .+++..+..++.|++.|+.+||+.+++|+||+|+
T Consensus        80 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~  159 (296)
T cd05051          80 NIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATR  159 (296)
T ss_pred             CEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchh
Confidence            66777777754 47899999995 69999998755           6889999999999999999999999999999999


Q ss_pred             ceeeecCCCeeEEecccccccccCCCCC--CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           70 NLLADIENKTVKIAADSGMAKEIDAPFD--AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        70 nil~~~~~~~~~i~~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ||+++ ..+.+++ +|||.+........  ......+++.|+|||.+.+.. .+.++|+||||+++|
T Consensus       160 Nili~-~~~~~~l-~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~  223 (296)
T cd05051         160 NCLVG-KNYTIKI-ADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGK-FTTKSDVWAFGVTLW  223 (296)
T ss_pred             ceeec-CCCceEE-ccccceeecccCcceeecCcCCCCceecCHHHhhcCC-CCccchhhhhHHHHH
Confidence            99999 6688899 89999876543321  222334567899999987755 778899999999987

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.94  E-value=2.4e-26  Score=150.76  Aligned_cols=130  Identities=20%  Similarity=0.303  Sum_probs=106.8

Q ss_pred             cchhhhccceec-ceeEEEeccC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            3 EMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQ--YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         3 ~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      |+++.+++.... ..+++||++. ++|.+++.+  ...++...+..++.|++.|+.+||+++++|+||+|+||+++ .++
T Consensus        63 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~-~~~  141 (261)
T cd05148          63 HLISLFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVG-EDL  141 (261)
T ss_pred             chhheeeeEecCCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEc-CCc
Confidence            567777766444 7889999995 699999976  34688999999999999999999999999999999999999 678


Q ss_pred             eeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           79 TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      .+++ +|||.+..............++..|++||...+.. .+.++|+||||+++|.
T Consensus       142 ~~kl-~d~g~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~-~~~~~DiwslG~~l~~  196 (261)
T cd05148         142 VCKV-ADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGT-FSTKSDVWSFGILLYE  196 (261)
T ss_pred             eEEE-ccccchhhcCCccccccCCCCceEecCHHHHccCC-CCchhhHHHHHHHHHH
Confidence            8999 79999987654433333444567899999987665 6788999999999873

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.94  E-value=1.5e-26  Score=154.46  Aligned_cols=116  Identities=20%  Similarity=0.223  Sum_probs=96.1

Q ss_pred             eEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEecccccccccCCCC
Q 043346           17 NLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPF   96 (135)
Q Consensus        17 ~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~~~~~~   96 (135)
                      ++++|.+..++.+.++.....++..+..++.|++.|+.|||+++++||||||+||+++ ..+.+++ +|||+++......
T Consensus       103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~-~~~~~~l-~DFGla~~~~~~~  180 (294)
T PHA02882        103 FILLEKLVENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVD-GNNRGYI-IDYGIASHFIIHG  180 (294)
T ss_pred             EEEEehhccCHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc-CCCcEEE-EEcCCceeeccCC
Confidence            6778877778887777655678889999999999999999999999999999999998 6678888 8999997653221


Q ss_pred             -------CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           97 -------DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        97 -------~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                             .......+|+.|+|||+..+.. ++.++|+||+||++|.
T Consensus       181 ~~~~~~~~~~~~~~gt~~y~ape~~~~~~-~~~~~DiwSlG~~l~e  225 (294)
T PHA02882        181 KHIEYSKEQKDLHRGTLYYAGLDAHNGAC-VTRRGDLESLGYCMLK  225 (294)
T ss_pred             cccccccccccccCCCccccCHHHhCCCC-CCcHHHHHHHHHHHHH
Confidence                   1223456899999999998776 7889999999999873

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.94  E-value=1.6e-26  Score=153.15  Aligned_cols=132  Identities=32%  Similarity=0.672  Sum_probs=109.6

Q ss_pred             ccchhhhccceec-ceeEEEeccCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNINLHKFIQQY---HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN   77 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~~L~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~   77 (135)
                      .|++++.+.+.+. ..+++||++.++|.+++...   ..+++..+..++.|++.|+.++|+.+++|+|++|+||+++ ++
T Consensus        58 ~~i~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~-~~  136 (284)
T cd07836          58 ENIVRLHDVIHTENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLIN-KR  136 (284)
T ss_pred             CCEeeeeeeEeeCCcEEEEEecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEC-CC
Confidence            3677787777544 78999999988999988763   3589999999999999999999999999999999999999 67


Q ss_pred             CeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           78 KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +.+++ .|||.+..............+++.|++||.+.+....+.++|+||+|+++|.
T Consensus       137 ~~~~l-~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~  193 (284)
T cd07836         137 GELKL-ADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAE  193 (284)
T ss_pred             CcEEE-eecchhhhhcCCccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHH
Confidence            88999 7999987664443333445567889999998776556789999999999873

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.94  E-value=2.4e-26  Score=152.18  Aligned_cols=129  Identities=26%  Similarity=0.463  Sum_probs=106.5

Q ss_pred             ccchhhhcccee---cceeEEEeccCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC
Q 043346            2 QEMMKSMSLWVH---KRENLVFEYVNINLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN   77 (135)
Q Consensus         2 ~~~~~~~~~~~~---~~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~   77 (135)
                      +|+++..+++.+   +..++++|++++++.+++.. ...+++..+..++.|++.|+++||+.+++|+||+|+||+++ . 
T Consensus        58 ~~i~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~-~-  135 (282)
T cd07831          58 PNILRLIEVLFDRKTGRLALVFELMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIK-D-  135 (282)
T ss_pred             CCccceEEEEecCCCCcEEEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEc-C-
Confidence            367777766633   47899999999999998876 35789999999999999999999999999999999999999 4 


Q ss_pred             CeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           78 KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +.+++ +|||.+....... ......++..|+|||.+.+....+.++|+||+||++|
T Consensus       136 ~~~kl-~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~  190 (282)
T cd07831         136 DILKL-ADFGSCRGIYSKP-PYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFF  190 (282)
T ss_pred             CCeEE-EecccccccccCC-CcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHH
Confidence            88999 7999998664432 2233457889999998755444678899999999987

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.94  E-value=3.2e-26  Score=149.49  Aligned_cols=130  Identities=22%  Similarity=0.368  Sum_probs=103.8

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      .|+++..+++... ..++|||++. ++|.+++... ..+++..+..++.|++.|+.|||+++++|+|++|+||+++ ..+
T Consensus        53 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~-~~~  131 (252)
T cd05084          53 PNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVT-EKN  131 (252)
T ss_pred             CCcceEEEEEcCCCCeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEc-CCC
Confidence            3677777776444 7889999995 6999999764 4689999999999999999999999999999999999998 677


Q ss_pred             eeEEecccccccccCCCCCCC--CCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           79 TVKIAADSGMAKEIDAPFDAH--TTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~~--~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .+++ +|||.+..........  .....+..|+|||.+.+.. .+.++|+||+|+++|
T Consensus       132 ~~kl-~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~  187 (252)
T cd05084         132 VLKI-SDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGR-YSSESDVWSFGILLW  187 (252)
T ss_pred             cEEE-CccccCcccccccccccCCCCCCceeecCchhhcCCC-CChHHHHHHHHHHHH
Confidence            8999 8999987654321111  1112245699999997766 678899999999987

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.94  E-value=1.7e-26  Score=154.43  Aligned_cols=129  Identities=17%  Similarity=0.351  Sum_probs=108.1

Q ss_pred             ccchhhhccce-ecceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWV-HKRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~-~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|+++.++.+. ++..++++|++. ++|.+++.. ..+++..+..++.|++.|+.+||+++++|+||+|+||+++ ..+.
T Consensus        78 p~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~-~~~~  155 (297)
T cd06659          78 QNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ-TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLT-LDGR  155 (297)
T ss_pred             CchhhhhhheeeCCeEEEEEecCCCCCHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEc-cCCc
Confidence            36777877664 448899999995 599887765 5689999999999999999999999999999999999998 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +++ +|||++..............++..|+|||.+.+.. .+.++|+||+|+++|
T Consensus       156 ~kL-~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~  208 (297)
T cd06659         156 VKL-SDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRTP-YGTEVDIWSLGIMVI  208 (297)
T ss_pred             EEE-eechhHhhcccccccccceecCccccCHHHHccCC-CCchhhHHHHHHHHH
Confidence            999 79999876544433344566888999999997765 678899999999987

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.94  E-value=2.4e-26  Score=151.14  Aligned_cols=130  Identities=22%  Similarity=0.320  Sum_probs=106.2

Q ss_pred             cchhhhccceecceeEEEeccC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            3 EMMKSMSLWVHKRENLVFEYVN-INLHKFIQQY--HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         3 ~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      |+++.++.+.+...+++||++. ++|.+++.+.  ..++.+.+..++.|++.|+.++|+++++|+||+|+||+++ .++.
T Consensus        62 ~i~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~-~~~~  140 (262)
T cd05071          62 KLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG-ENLV  140 (262)
T ss_pred             CcceEEEEECCCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEc-CCCc
Confidence            6677777776678899999995 6999999763  3578899999999999999999999999999999999999 6778


Q ss_pred             eEEecccccccccCCCCCC-CCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDA-HTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~-~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||.+......... .....++..|+|||...+.. .+.++|+||||+++|+
T Consensus       141 ~~L-~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~-~~~~~DvwslG~~l~e  195 (262)
T cd05071         141 CKV-ADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKSDVWSFGILLTE  195 (262)
T ss_pred             EEe-ccCCceeeccccccccccCCcccceecCHhHhccCC-CCchhhHHHHHHHHHH
Confidence            899 799998765433221 12334566799999987665 6889999999999873

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.94  E-value=1.8e-26  Score=151.80  Aligned_cols=132  Identities=24%  Similarity=0.407  Sum_probs=109.4

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|+++.++.+.++ ..++++|++. ++|.+++.+.+++++..+..++.|++.|+.+||+++++|+||+|+||+++..+..
T Consensus        63 ~~iv~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~  142 (268)
T cd06630          63 PHIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQR  142 (268)
T ss_pred             CceehhhceeccCCeEEEEEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCE
Confidence            3678888887554 7899999995 5999999887889999999999999999999999999999999999999855557


Q ss_pred             eEEecccccccccCCCCC----CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFD----AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~----~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||.+........    ......++..|+|||.+.+.. .+.++|+||+|+++|+
T Consensus       143 ~~l-~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~-~~~~~Dv~slG~~l~~  200 (268)
T cd06630         143 LRI-ADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQ-YGRSCDVWSVGCVIIE  200 (268)
T ss_pred             EEE-cccccccccccccccCCccccccccccceeCHhHhccCC-CCcccchHHHHHHHHH
Confidence            888 89999877654321    122345778899999987665 6788999999999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=6.5e-28  Score=168.45  Aligned_cols=124  Identities=22%  Similarity=0.352  Sum_probs=105.1

Q ss_pred             cchhhhccceec-ceeEEEeccCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            3 EMMKSMSLWVHK-RENLVFEYVNINLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         3 ~~~~~~~~~~~~-~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      |+|..-+.|-.. ..|+|||||-||-.+.+.- ..++.+.++..+..+.+.||.|||+.+.+|||||..||++. +.+.+
T Consensus        87 ntieYkgCyLre~TaWLVMEYClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLs-e~g~V  165 (948)
T KOG0577|consen   87 NTIEYKGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLS-EPGLV  165 (948)
T ss_pred             CcccccceeeccchHHHHHHHHhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEec-CCCee
Confidence            556665666443 6899999998888887764 46789999999999999999999999999999999999999 88999


Q ss_pred             EEecccccccccCCCCCCCCCCcccccccCcccccC--CCCCCchhHHHHhhhh
Q 043346           81 KIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFG--RTNCFAAIDMWAVLYL  132 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~--~~~~~~~~D~wslg~i  132 (135)
                      |+ +|||.+...    .+..+|+|||.|||||+++.  ...++-++||||||++
T Consensus       166 KL-aDFGSAsi~----~PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGIT  214 (948)
T KOG0577|consen  166 KL-ADFGSASIM----APANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT  214 (948)
T ss_pred             ee-ccccchhhc----CchhcccCCccccchhHheeccccccCCccceeeccch
Confidence            99 899988754    44678999999999999943  2337789999999975

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.94  E-value=1.7e-26  Score=151.83  Aligned_cols=130  Identities=25%  Similarity=0.461  Sum_probs=108.0

Q ss_pred             cchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            3 EMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         3 ~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      |++++.+.+.+. ..++++|++. ++|.+++...+.+++..+..++.|++.|++++|+++++|+||+|+||+++ +.+.+
T Consensus        67 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~-~~~~~  145 (267)
T cd06628          67 NIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVD-NKGGI  145 (267)
T ss_pred             CeeeEEEEEEeCCccEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEc-CCCCE
Confidence            567777776544 7889999995 59999998888899999999999999999999999999999999999998 77889


Q ss_pred             EEecccccccccCCCCC------CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           81 KIAADSGMAKEIDAPFD------AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~~------~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ++ +|||.+........      ......++..|+|||.+.+.. .+.++|+||+|+++|.
T Consensus       146 ~l-~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~-~~~~~Dv~slG~il~~  204 (267)
T cd06628         146 KI-SDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTS-YTRKADIWSLGCLVVE  204 (267)
T ss_pred             Ee-cccCCCcccccccccCCccccccccCCCcCccChhHhccCC-CCchhhhHHHHHHHHH
Confidence            99 79999886653211      112345778899999997765 6788999999999873

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.94  E-value=1.8e-26  Score=156.64  Aligned_cols=131  Identities=29%  Similarity=0.520  Sum_probs=108.8

Q ss_pred             ccchhhhccceec------ceeEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeec
Q 043346            2 QEMMKSMSLWVHK------RENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI   75 (135)
Q Consensus         2 ~~~~~~~~~~~~~------~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~   75 (135)
                      .|+++..+++...      ..++++|+++++|.+++..++.+++..+..++.|++.|+.+||+++++|+||+|+||+++ 
T Consensus        64 ~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~-  142 (337)
T cd07858          64 ENVIAIKDIMPPPHREAFNDVYIVYELMDTDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLN-  142 (337)
T ss_pred             CCccchHHheecccccccCcEEEEEeCCCCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc-
Confidence            3566666665322      479999999999999998888899999999999999999999999999999999999998 


Q ss_pred             CCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           76 ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        76 ~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ..+.+++ +|||++..............++..|+|||.+.+....+.++|+||+|+++|
T Consensus       143 ~~~~~kL-~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~  200 (337)
T cd07858         143 ANCDLKI-CDFGLARTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFA  200 (337)
T ss_pred             CCCCEEE-CcCccccccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHH
Confidence            6688999 799998866443233344567888999999866444778899999999987

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.94  E-value=2e-26  Score=155.04  Aligned_cols=130  Identities=24%  Similarity=0.437  Sum_probs=103.9

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHhhCCccc
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQY----------------HPMDSHLIKKFLYCILSGISYCHARKIIH   63 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~----------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h   63 (135)
                      .|+++.++++.++ ..+++|||+. ++|.+++.+.                ..++...+..++.|++.|+.|+|++|++|
T Consensus        78 ~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H  157 (314)
T cd05099          78 KNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIH  157 (314)
T ss_pred             CCeeeEEEEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence            3677777766544 7899999995 6999999753                24788889999999999999999999999


Q ss_pred             CCCCCcceeeecCCCeeEEecccccccccCCCCCC--CCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           64 RDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDA--HTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        64 ~dl~~~nil~~~~~~~~~i~~d~~~~~~~~~~~~~--~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +||+|+||+++ .++.+++ +|||.++........  .....++..|+|||.+.+.. .+.++|+||||+++|
T Consensus       158 ~dlkp~Nill~-~~~~~kL-~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~~l~  227 (314)
T cd05099         158 RDLAARNVLVT-EDNVMKI-ADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRV-YTHQSDVWSFGILMW  227 (314)
T ss_pred             ccccceeEEEc-CCCcEEE-ccccccccccccccccccccCCCCccccCHHHHccCC-cCccchhhHHHHHHH
Confidence            99999999998 6788999 799999866432111  12223345799999997765 678899999999987

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.94  E-value=2.1e-26  Score=154.49  Aligned_cols=130  Identities=25%  Similarity=0.417  Sum_probs=103.4

Q ss_pred             cchhhhccceec-ceeEEEeccC-CCHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHhhCCcccC
Q 043346            3 EMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYH----------------PMDSHLIKKFLYCILSGISYCHARKIIHR   64 (135)
Q Consensus         3 ~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~----------------~~~~~~~~~~~~~i~~~l~~lh~~~i~h~   64 (135)
                      |+++.++.+... ..|++||++. ++|.+++....                .++..++..++.|++.|++|||+++++|+
T Consensus        85 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~  164 (307)
T cd05098          85 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHR  164 (307)
T ss_pred             CEeeEEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccc
Confidence            567777666444 7899999995 69999997632                47788999999999999999999999999


Q ss_pred             CCCCcceeeecCCCeeEEecccccccccCCCCCC--CCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           65 DLTTMNLLADIENKTVKIAADSGMAKEIDAPFDA--HTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        65 dl~~~nil~~~~~~~~~i~~d~~~~~~~~~~~~~--~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ||+|+||+++ ..+.+++ +|||.+.........  .....+++.|+|||.+.+.. .+.++|+||+|+++|.
T Consensus       165 dlkp~Nill~-~~~~~kL-~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslG~~l~e  234 (307)
T cd05098         165 DLAARNVLVT-EDNVMKI-ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI-YTHQSDVWSFGVLLWE  234 (307)
T ss_pred             cccHHheEEc-CCCcEEE-CCCcccccccccchhhccccCCCccceeChHHhccCC-CCcHHHHHHHHHHHHH
Confidence            9999999999 6688999 799998765432111  11223346799999997765 6788999999999873

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.94  E-value=3.3e-26  Score=155.49  Aligned_cols=130  Identities=25%  Similarity=0.452  Sum_probs=104.4

Q ss_pred             ccchhhhcccee--cceeEEEeccC-CCHHHHHHhc--------------------------------------------
Q 043346            2 QEMMKSMSLWVH--KRENLVFEYVN-INLHKFIQQY--------------------------------------------   34 (135)
Q Consensus         2 ~~~~~~~~~~~~--~~~~lv~e~~~-~~L~~~~~~~--------------------------------------------   34 (135)
                      .|++++++.+..  ...++++||+. ++|.+++...                                            
T Consensus        71 ~niv~~~~~~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (337)
T cd05054          71 LNVVNLLGACTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIED  150 (337)
T ss_pred             cchhheeeeEecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccC
Confidence            367777776633  36789999995 6999988542                                            


Q ss_pred             -----------------CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEecccccccccCCCCC
Q 043346           35 -----------------HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFD   97 (135)
Q Consensus        35 -----------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~~~~~~~   97 (135)
                                       ..++...+..++.|++.|+.|||+++++||||||+||+++ ..+.+++ +|||++........
T Consensus       151 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~-~~~~vkL-~DfG~a~~~~~~~~  228 (337)
T cd05054         151 KSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLS-ENNVVKI-CDFGLARDIYKDPD  228 (337)
T ss_pred             cchhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEe-CCCcEEE-eccccchhcccCcc
Confidence                             2568888999999999999999999999999999999999 6778999 79999987643221


Q ss_pred             --CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           98 --AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        98 --~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                        ......++..|+|||.+.+.. ++.++|+||+||++|
T Consensus       229 ~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~SlGv~l~  266 (337)
T cd05054         229 YVRKGDARLPLKWMAPESIFDKV-YTTQSDVWSFGVLLW  266 (337)
T ss_pred             hhhccCCCCCccccCcHHhcCCC-CCccccHHHHHHHHH
Confidence              122334567899999998776 788899999999987

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.94  E-value=2.8e-26  Score=152.79  Aligned_cols=131  Identities=19%  Similarity=0.270  Sum_probs=105.7

Q ss_pred             cchhhhccc-eecceeEEEeccC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            3 EMMKSMSLW-VHKRENLVFEYVN-INLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         3 ~~~~~~~~~-~~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      |+++..+.+ .++..+++||+++ ++|..++.+ ...+++..+..++.|++.++.+||+.+++|+|++|+||+++ .++.
T Consensus        70 ~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~-~~~~  148 (292)
T cd06644          70 YIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLT-LDGD  148 (292)
T ss_pred             cEeeeEEEEEeCCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEc-CCCC
Confidence            566766655 4458999999995 588887765 45789999999999999999999999999999999999998 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccC----CCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFG----RTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~----~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||.+..............+++.|+|||.+.+    ...++.++|+||+||++|+
T Consensus       149 ~kl-~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~e  207 (292)
T cd06644         149 IKL-ADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIE  207 (292)
T ss_pred             EEE-ccCccceeccccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHH
Confidence            999 899988765444333445567889999999853    2225678999999999874

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.94  E-value=2.3e-26  Score=154.44  Aligned_cols=128  Identities=18%  Similarity=0.333  Sum_probs=107.7

Q ss_pred             cchhhhccce-ecceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhh-CCcccCCCCCcceeeecCCCe
Q 043346            3 EMMKSMSLWV-HKRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHA-RKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         3 ~~~~~~~~~~-~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~~~nil~~~~~~~   79 (135)
                      |+++..+.+. ++..+++|||++ ++|.+++.+.+.+++..+..++.|++.|+.|||+ .+++|+|++|+||+++ .++.
T Consensus        60 ~iv~~~~~~~~~~~~~lv~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~-~~~~  138 (308)
T cd06615          60 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVN-SRGE  138 (308)
T ss_pred             CCCeEEEEEeeCCEEEEEeeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEe-cCCc
Confidence            6777776664 448899999995 5999999887889999999999999999999997 5899999999999999 6678


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||.+......  ......+++.|+|||.+.+.. .+.++|+||+|+++|+
T Consensus       139 ~~l-~dfg~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~-~~~~~DiwslG~~l~~  190 (308)
T cd06615         139 IKL-CDFGVSGQLIDS--MANSFVGTRSYMSPERLQGTH-YTVQSDIWSLGLSLVE  190 (308)
T ss_pred             EEE-ccCCCccccccc--ccccCCCCcCccChhHhcCCC-CCccchHHHHHHHHHH
Confidence            899 899988755332  223456788999999987655 6788999999999873

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.94  E-value=3.2e-26  Score=153.37  Aligned_cols=130  Identities=22%  Similarity=0.373  Sum_probs=106.1

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYH--PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN   77 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~   77 (135)
                      +|+++.++.+... ..+++|||+. ++|.+++....  .++......++.|++.|++|+|+++++|+||+|+||+++ .+
T Consensus        99 ~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~-~~  177 (302)
T cd05055          99 ENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLT-HG  177 (302)
T ss_pred             CCcceEEEEEecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEc-CC
Confidence            4677777776444 7899999995 69999997633  389999999999999999999999999999999999998 77


Q ss_pred             CeeEEecccccccccCCCCC--CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           78 KTVKIAADSGMAKEIDAPFD--AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +.+++ +|||.+........  ......++..|+|||.+.+.. .+.++|+||+|+++|
T Consensus       178 ~~~~l-~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DiwslGvil~  234 (302)
T cd05055         178 KIVKI-CDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCV-YTFESDVWSYGILLW  234 (302)
T ss_pred             CeEEE-CCCcccccccCCCceeecCCCCcccccCCHhhhccCC-CCcHhHHHHHHHHHH
Confidence            88899 79999876543321  122234567899999997766 678899999999987

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.94  E-value=3.7e-26  Score=150.24  Aligned_cols=130  Identities=19%  Similarity=0.359  Sum_probs=107.9

Q ss_pred             ccchhhhcccee-cceeEEEeccC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeec
Q 043346            2 QEMMKSMSLWVH-KRENLVFEYVN-INLHKFIQQ----YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI   75 (135)
Q Consensus         2 ~~~~~~~~~~~~-~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~   75 (135)
                      .|+++..+.+.+ +..+++||+++ ++|.+++..    ...+++..+..++.|++.|+.|||+++++|+||+|+||+++ 
T Consensus        62 ~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~-  140 (267)
T cd08229          62 PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFIT-  140 (267)
T ss_pred             CchhhhhheeEeCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc-
Confidence            367777777754 47899999996 599998864    34688999999999999999999999999999999999998 


Q ss_pred             CCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           76 ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        76 ~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .++.+++ +|||.+..............++..|+|||.+.+.. .+.++|+||+|+++|
T Consensus       141 ~~~~~~l-~dfg~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~-~~~~~Dv~slG~il~  197 (267)
T cd08229         141 ATGVVKL-GDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENG-YNFKSDIWSLGCLLY  197 (267)
T ss_pred             CCCCEEE-CcchhhhccccCCcccccccCCcCccCHHHhcCCC-ccchhhHHHHHHHHH
Confidence            6788999 79999876654433334456788999999997765 678899999999987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.94  E-value=1.9e-26  Score=153.34  Aligned_cols=129  Identities=21%  Similarity=0.279  Sum_probs=104.2

Q ss_pred             cchhhhccc-eecceeEEEeccC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            3 EMMKSMSLW-VHKRENLVFEYVN-INLHKFIQQ--YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         3 ~~~~~~~~~-~~~~~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      +++.....+ .++..+++||++. ++|.+++..  ...+++..+..++.|++.|+.|||+.+++|+||+|+|++++ +.+
T Consensus        61 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~-~~~  139 (285)
T cd05632          61 FVVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLD-DYG  139 (285)
T ss_pred             CceeEEEEEecCCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEC-CCC
Confidence            445554444 3447889999995 599888865  34689999999999999999999999999999999999998 567


Q ss_pred             eeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           79 TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      .+++ +|||++...... .......+++.|+|||.+.+.. ++.++|+||+|+++|+
T Consensus       140 ~~kl-~Dfg~~~~~~~~-~~~~~~~g~~~~~aPE~~~~~~-~~~~~Di~slG~~l~~  193 (285)
T cd05632         140 HIRI-SDLGLAVKIPEG-ESIRGRVGTVGYMAPEVLNNQR-YTLSPDYWGLGCLIYE  193 (285)
T ss_pred             CEEE-ecCCcceecCCC-CcccCCCCCcCccChHHhcCCC-CCcccchHHHHHHHHH
Confidence            8999 799988755332 2223456889999999997765 7788999999999874

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.94  E-value=2.5e-26  Score=150.26  Aligned_cols=130  Identities=22%  Similarity=0.396  Sum_probs=109.9

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQY--HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN   77 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~   77 (135)
                      .|++++.+.+.+. ..+++||++. ++|.+++.+.  ..+++..+..++.|++.++.++|+.+++|+||+|+||+++ ..
T Consensus        59 ~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~-~~  137 (256)
T cd08221          59 PNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLT-KA  137 (256)
T ss_pred             CCeeEEEeEEecCCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEe-CC
Confidence            3677887777544 7889999995 6999999774  4689999999999999999999999999999999999999 67


Q ss_pred             CeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           78 KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +.+++ +|||.+..............+++.|+|||.+.+.. .+.++|+||+|++++
T Consensus       138 ~~~kl-~d~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~-~~~~~Dv~slG~i~~  192 (256)
T cd08221         138 GLIKL-GDFGISKILGSEYSMAETVVGTPYYMSPELCQGVK-YNFKSDIWALGCVLY  192 (256)
T ss_pred             CCEEE-CcCcceEEcccccccccccCCCccccCHhhcCCCC-CCCcchhHHHHHHHH
Confidence            78999 89999887655443445567889999999997765 677899999999987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.94  E-value=3.5e-27  Score=156.75  Aligned_cols=125  Identities=23%  Similarity=0.429  Sum_probs=104.1

Q ss_pred             hhhhccc-eecceeEEEeccCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecC-----
Q 043346            5 MKSMSLW-VHKRENLVFEYVNINLHKFIQQYH--PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE-----   76 (135)
Q Consensus         5 ~~~~~~~-~~~~~~lv~e~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~-----   76 (135)
                      +...+++ .+++.++|+|.++.|+.+|+++++  +++...+..++.|++.++++||+.+++|-||||+||++.+.     
T Consensus       154 v~m~~wFdyrghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~  233 (415)
T KOG0671|consen  154 VQMRDWFDYRGHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKT  233 (415)
T ss_pred             EeeehhhhccCceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEE
Confidence            4455556 455899999999999999999865  78899999999999999999999999999999999997411     


Q ss_pred             --------------CCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           77 --------------NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        77 --------------~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                                    +..+++ +|||.+..-..   .....+.|.+|.|||++++.+ ++.++|+||+||||+
T Consensus       234 ~~~k~~~~~~r~~ks~~I~v-IDFGsAtf~~e---~hs~iVsTRHYRAPEViLgLG-wS~pCDvWSiGCIL~  300 (415)
T KOG0671|consen  234 YNPKKKVCFIRPLKSTAIKV-IDFGSATFDHE---HHSTIVSTRHYRAPEVILGLG-WSQPCDVWSIGCILV  300 (415)
T ss_pred             eccCCccceeccCCCcceEE-EecCCcceecc---CcceeeeccccCCchheeccC-cCCccCceeeeeEEE
Confidence                          224566 69998865433   246667899999999999988 899999999999985

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.94  E-value=2.3e-26  Score=150.72  Aligned_cols=131  Identities=19%  Similarity=0.345  Sum_probs=106.6

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      +|+++.++++.+. ..+++||++. ++|.+++... ..+++..+..++.|++.|+.+||+.+++|+||+|+||+++ .++
T Consensus        59 ~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~-~~~  137 (256)
T cd05113          59 EKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVD-DQG  137 (256)
T ss_pred             CCeeeEEEEEccCCCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEc-CCC
Confidence            4677888777544 6789999995 6999999764 4689999999999999999999999999999999999999 678


Q ss_pred             eeEEecccccccccCCCCCCC-CCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           79 TVKIAADSGMAKEIDAPFDAH-TTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~~-~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      .+++ +|||.++....+.... ....++..|++||...+.. .+.++|+||||+++|.
T Consensus       138 ~~kl-~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~-~~~~~Di~slG~~l~~  193 (256)
T cd05113         138 CVKV-SDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSK-FSSKSDVWAFGVLMWE  193 (256)
T ss_pred             CEEE-CCCccceecCCCceeecCCCccChhhCCHHHHhcCc-ccchhHHHHHHHHHHH
Confidence            8999 8999987654432211 1223456799999997665 6788999999999873

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.94  E-value=3e-26  Score=155.34  Aligned_cols=131  Identities=30%  Similarity=0.525  Sum_probs=108.2

Q ss_pred             ccchhhhcccee-cceeEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            2 QEMMKSMSLWVH-KRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         2 ~~~~~~~~~~~~-~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      .|+++..+++.. +..+++||+++++|.+++.....++++....++.|++.|+++||+.+++|+||+|+||+++ ..+.+
T Consensus        80 ~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~-~~~~~  158 (335)
T PTZ00024         80 ENIMGLVDVYVEGDFINLVMDIMASDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFIN-SKGIC  158 (335)
T ss_pred             cceeeeeEEEecCCcEEEEEeccccCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEEC-CCCCE
Confidence            356677776644 4788999999999999998877899999999999999999999999999999999999999 67888


Q ss_pred             EEecccccccccCCC--------------CCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           81 KIAADSGMAKEIDAP--------------FDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~--------------~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ++ .|||.+.....+              ........+++.|+|||.+.+....+.++|+||+|+++|
T Consensus       159 kl-~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~  225 (335)
T PTZ00024        159 KI-ADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFA  225 (335)
T ss_pred             EE-CCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHH
Confidence            99 799998765411              111223345778999999977655688999999999987

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.94  E-value=9.3e-27  Score=167.05  Aligned_cols=118  Identities=25%  Similarity=0.358  Sum_probs=98.6

Q ss_pred             ceeEEEeccC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhCC--cccCCCCCcceeeecCCCeeEEecccccc
Q 043346           15 RENLVFEYVN-INLHKFIQQ--YHPMDSHLIKKFLYCILSGISYCHARK--IIHRDLTTMNLLADIENKTVKIAADSGMA   89 (135)
Q Consensus        15 ~~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~--i~h~dl~~~nil~~~~~~~~~i~~d~~~~   89 (135)
                      +..+.||||. |+|-+++..  ..++++.++++|+.|++.|+.+||...  ++|||||.+|+|+. ..+..|+ +|||.+
T Consensus       116 EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls-~~g~~KL-CDFGSa  193 (738)
T KOG1989|consen  116 EVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLS-ADGNYKL-CDFGSA  193 (738)
T ss_pred             EEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEc-CCCCEEe-Cccccc
Confidence            4679999996 699999985  456999999999999999999999987  99999999999999 7788999 999988


Q ss_pred             cccCCCCCC---------CCCCcccccccCcccc---cCCCCCCchhHHHHhhhhhhC
Q 043346           90 KEIDAPFDA---------HTTEMVILRYRAPKIL---FGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        90 ~~~~~~~~~---------~~~~~~~~~~~ape~~---~~~~~~~~~~D~wslg~il~~  135 (135)
                      .........         .....-|+.|+|||++   .+.+ .+.++|+|||||+||.
T Consensus       194 tt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~p-I~eKsDIWALGclLYk  250 (738)
T KOG1989|consen  194 TTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLP-IGEKSDIWALGCLLYK  250 (738)
T ss_pred             ccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCC-CcchhHHHHHHHHHHH
Confidence            755433321         1123558899999999   4444 8899999999999983

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.94  E-value=2.5e-26  Score=152.52  Aligned_cols=130  Identities=22%  Similarity=0.387  Sum_probs=104.9

Q ss_pred             cchhhhcccee---cceeEEEeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC
Q 043346            3 EMMKSMSLWVH---KRENLVFEYVN-INLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN   77 (135)
Q Consensus         3 ~~~~~~~~~~~---~~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~   77 (135)
                      |+++..+++..   ...+++|||+. ++|.+++.+. ..++...+..++.|++.|+.++|+++++|+||+|+||+++ .+
T Consensus        67 ~i~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~-~~  145 (284)
T cd05079          67 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVE-SE  145 (284)
T ss_pred             CeeeeeeEEecCCCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEc-CC
Confidence            56666666543   35789999994 6999999764 3579999999999999999999999999999999999998 67


Q ss_pred             CeeEEecccccccccCCCCC---CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           78 KTVKIAADSGMAKEIDAPFD---AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~---~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +.+++ +|||++........   ......++..|+|||.+.+.. .+.++|+||+|+++|.
T Consensus       146 ~~~~l-~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~-~~~~~Di~slG~il~e  204 (284)
T cd05079         146 HQVKI-GDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSK-FYIASDVWSFGVTLYE  204 (284)
T ss_pred             CCEEE-CCCccccccccCccceeecCCCCCCccccCHHHhccCC-CCccccchhhhhhhhh
Confidence            78899 89999886643322   122345566799999987765 6788999999999873

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.94  E-value=2.6e-26  Score=153.81  Aligned_cols=130  Identities=19%  Similarity=0.340  Sum_probs=106.7

Q ss_pred             ccchhhhccceecceeEEEeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHKRENLVFEYVN-INLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|+++.++++..+..++++|++. ++|.+++..+ ..+++..+..++.|++.|+.|||+++++|+||+|+||+++ ..+.
T Consensus        69 ~niv~~~~~~~~~~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~-~~~~  147 (303)
T cd05110          69 PHLVRLLGVCLSPTIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVK-SPNH  147 (303)
T ss_pred             CCcccEEEEEcCCCceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeec-CCCc
Confidence            47788888877667789999994 7999998764 3688999999999999999999999999999999999998 6678


Q ss_pred             eEEecccccccccCCCCCC--CCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDA--HTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~--~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +++ +|||++.........  .....++..|+|||.+.+.. .+.++|+||||+++|
T Consensus       148 ~kL-~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~-~~~~~DiwslG~~l~  202 (303)
T cd05110         148 VKI-TDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRK-FTHQSDVWSYGVTIW  202 (303)
T ss_pred             eEE-ccccccccccCcccccccCCCccccccCCHHHhccCC-CChHHHHHHHHHHHH
Confidence            899 799999866433221  12233466899999987665 788899999999987

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.94  E-value=3.3e-26  Score=150.49  Aligned_cols=130  Identities=20%  Similarity=0.356  Sum_probs=106.2

Q ss_pred             cchhhhcccee---cceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            3 EMMKSMSLWVH---KRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         3 ~~~~~~~~~~~---~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      |+++..+.+.+   ...+++||++. ++|.+++.+.+.+++.....++.|++.++.++|+++++|+||+|+||+++ ..+
T Consensus        65 ~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~-~~~  143 (265)
T cd06652          65 RIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRD-SVG  143 (265)
T ss_pred             CeeeEEeEeccCCCceEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEec-CCC
Confidence            56666666543   25779999995 69999998877889999999999999999999999999999999999998 678


Q ss_pred             eeEEecccccccccCCCC---CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           79 TVKIAADSGMAKEIDAPF---DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~---~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      .+++ +|||.+.......   .......++..|+|||...+.. .+.++|+||||+++|.
T Consensus       144 ~~~l-~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~e  201 (265)
T cd06652         144 NVKL-GDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEG-YGRKADIWSVGCTVVE  201 (265)
T ss_pred             CEEE-CcCccccccccccccccccccCCCCccccChhhhcCCC-CCcchhHHHHHHHHHH
Confidence            8899 8999887653221   1223345788899999997755 6788999999999873

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=2e-26  Score=152.63  Aligned_cols=131  Identities=18%  Similarity=0.286  Sum_probs=106.9

Q ss_pred             cchhhhcccee-cceeEEEeccC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            3 EMMKSMSLWVH-KRENLVFEYVN-INLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         3 ~~~~~~~~~~~-~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      |+++..+.+.. ...|++||+++ ++|.+++.+ ...+++..+..++.|++.++.|||+++++|+|++|+|++++ ..+.
T Consensus        63 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~-~~~~  141 (280)
T cd06611          63 NIVGLYEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLT-LDGD  141 (280)
T ss_pred             ceeEEEEEEecCCeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEC-CCCC
Confidence            56777776644 47899999996 599999876 35789999999999999999999999999999999999998 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCC----CCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGR----TNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~----~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||.+..............+++.|+|||.+...    ...+.++|+||+|+++|+
T Consensus       142 ~~l-~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~  200 (280)
T cd06611         142 VKL-ADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIE  200 (280)
T ss_pred             EEE-ccCccchhhcccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHH
Confidence            999 7999887654443334455678899999998532    225668999999999874

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.94  E-value=3.4e-26  Score=151.38  Aligned_cols=130  Identities=24%  Similarity=0.351  Sum_probs=108.6

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .++++..+.+.++ ..++|||+++ ++|.+++.. +++++..+..++.|++.|++++|+++++|+||+|+||+++ ..+.
T Consensus        62 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~-~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~-~~~~  139 (277)
T cd06640          62 PYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLS-EQGD  139 (277)
T ss_pred             CCEeeEEEEEEECCEEEEEEecCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEc-CCCC
Confidence            3667777777544 7899999995 599998876 5789999999999999999999999999999999999999 6678


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||++..............++..|+|||.+.+.. .+.++|+||||+++|+
T Consensus       140 ~~l-~dfg~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~-~~~~~Dv~slG~il~e  193 (277)
T cd06640         140 VKL-ADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSA-YDSKADIWSLGITAIE  193 (277)
T ss_pred             EEE-cccccceeccCCccccccccCcccccCHhHhccCC-CccHHHHHHHHHHHHH
Confidence            899 89999977654433344456788899999997765 6789999999999974

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.94  E-value=4.2e-26  Score=149.34  Aligned_cols=131  Identities=17%  Similarity=0.291  Sum_probs=105.9

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      .|+++.++++..+ ..+++|||+. ++|.+++.. .+.+++..+..++.|++.|++|||+++++|+|++|+|++++ ..+
T Consensus        59 ~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~-~~~  137 (256)
T cd05114          59 PKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVS-STG  137 (256)
T ss_pred             CCceeEEEEEccCCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEc-CCC
Confidence            3677777776444 7899999994 699999875 35688999999999999999999999999999999999999 678


Q ss_pred             eeEEecccccccccCCCCCC-CCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           79 TVKIAADSGMAKEIDAPFDA-HTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~-~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      .+++ +|||.+......... .....++..|+|||.+.+.. .+.++|+||+|+++|.
T Consensus       138 ~~kl-~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~s~G~~l~e  193 (256)
T cd05114         138 VVKV-SDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSK-YSSKSDVWSFGVLMWE  193 (256)
T ss_pred             eEEE-CCCCCccccCCCceeccCCCCCchhhCChhhcccCc-cchhhhhHHHHHHHHH
Confidence            8999 899988765433221 12233456799999997665 7789999999999873

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.94  E-value=2.2e-26  Score=157.09  Aligned_cols=127  Identities=29%  Similarity=0.481  Sum_probs=104.8

Q ss_pred             cchhhhcccee-------cceeEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeec
Q 043346            3 EMMKSMSLWVH-------KRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI   75 (135)
Q Consensus         3 ~~~~~~~~~~~-------~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~   75 (135)
                      |+++.++.+..       ...|+|||+++++|.+.+...  ++...+..++.|++.|+++||++|++|+||+|+||+++ 
T Consensus        76 ~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~--l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~-  152 (353)
T cd07850          76 NIIGLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK-  152 (353)
T ss_pred             CCcceeeeeccCCCccccCcEEEEEeccCCCHHHHHhhc--CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEC-
Confidence            56666655532       246899999999999988764  88999999999999999999999999999999999999 


Q ss_pred             CCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           76 ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        76 ~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      .++.+++ +|||.+...... .......+++.|+|||.+.+.. .+.++|+||+|+++|+
T Consensus       153 ~~~~~kL-~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslG~~l~~  209 (353)
T cd07850         153 SDCTLKI-LDFGLARTAGTS-FMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGE  209 (353)
T ss_pred             CCCCEEE-ccCccceeCCCC-CCCCCCcccccccCHHHHhCCC-CCCchhhHhHHHHHHH
Confidence            6678999 899999865443 2233456788999999998766 7889999999999873

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.94  E-value=3.1e-26  Score=150.00  Aligned_cols=131  Identities=17%  Similarity=0.278  Sum_probs=104.6

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      .|+++.++++... ..+++||+++ ++|.+++.. .+.++++.+..++.|++.|+.+||+++++|+|++|+||+++ .++
T Consensus        59 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~-~~~  137 (256)
T cd05059          59 PNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVG-EDN  137 (256)
T ss_pred             CCEEEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEEC-CCC
Confidence            3567776666443 7889999995 699999976 34689999999999999999999999999999999999999 678


Q ss_pred             eeEEecccccccccCCCCCC-CCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           79 TVKIAADSGMAKEIDAPFDA-HTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~-~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      .+++ +|||.++........ .....++..|+|||.+.+.. .+.++|+||+|+++|+
T Consensus       138 ~~kl-~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~-~~~~~Di~slG~il~~  193 (256)
T cd05059         138 VVKV-SDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSR-FSSKSDVWSFGVLMWE  193 (256)
T ss_pred             cEEE-CCcccceecccccccccCCCCCCccccCHHHhccCC-CCchhhHHHHHHHHHH
Confidence            8999 899998765432211 11122345799999997765 6788999999999873

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=2.9e-26  Score=151.42  Aligned_cols=129  Identities=21%  Similarity=0.316  Sum_probs=109.8

Q ss_pred             cchhhhcccee-cceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            3 EMMKSMSLWVH-KRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         3 ~~~~~~~~~~~-~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      |+++..+.+.+ ...++++|++. ++|.+++... .+++..+..++.|++.++.++|+.+++|+|++|+|++++ +++.+
T Consensus        60 ~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~-~~~~~  137 (274)
T cd06609          60 YITKYYGSFLKGSKLWIIMEYCGGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLS-EEGDV  137 (274)
T ss_pred             CeeeeeEEEEECCeEEEEEEeeCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC-CCCCE
Confidence            56677666644 47889999995 5999999874 889999999999999999999999999999999999999 67889


Q ss_pred             EEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           81 KIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ++ +|||.+..............+++.|+|||.+.+.. .+.++|+||+|+++|+
T Consensus       138 ~l-~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~-~~~~sDv~slG~il~~  190 (274)
T cd06609         138 KL-ADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQSG-YDEKADIWSLGITAIE  190 (274)
T ss_pred             EE-cccccceeecccccccccccCCccccChhhhccCC-CCchhhHHHHHHHHHH
Confidence            99 79999987765544444567788899999998776 7889999999999874

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.94  E-value=2.8e-26  Score=150.55  Aligned_cols=129  Identities=27%  Similarity=0.374  Sum_probs=108.4

Q ss_pred             cchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            3 EMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         3 ~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      |+++..+.+.++ ..++++|++. ++|.+++.+...+++..+..++.|++.|+.++|+++++|+|++|+||+++ ..+.+
T Consensus        54 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~-~~~~~  132 (262)
T cd05572          54 FIVKLYRTFKDKKYIYMLMEYCLGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLD-SNGYV  132 (262)
T ss_pred             CEeeeeeeEEcCCccEEEEecCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEc-CCCCE
Confidence            667777766444 7899999985 69999998877889999999999999999999999999999999999999 66889


Q ss_pred             EEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           81 KIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ++ +|||.+....... ......+++.|++||.+.+.. .+.++|+||+|+++|+
T Consensus       133 ~l-~df~~~~~~~~~~-~~~~~~~~~~~~~PE~~~~~~-~~~~~Di~slG~il~~  184 (262)
T cd05572         133 KL-VDFGFAKKLKSGQ-KTWTFCGTPEYVAPEIILNKG-YDFSVDYWSLGILLYE  184 (262)
T ss_pred             EE-eeCCcccccCccc-ccccccCCcCccChhHhcCCC-CCChhhhhhhHHHHHH
Confidence            99 7999988765432 223446788999999987655 6788999999999873

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.94  E-value=4.6e-26  Score=148.87  Aligned_cols=131  Identities=21%  Similarity=0.337  Sum_probs=109.7

Q ss_pred             ccchhhhcccee-cceeEEEeccC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVH-KRENLVFEYVN-INLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~-~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      .|++++.+.+.. ...|+++|+++ ++|.+++.. ...+++..+..++.|++.|+.+||+.+++|+|++|+||+++ ..+
T Consensus        58 ~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~-~~~  136 (256)
T cd06612          58 PYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLN-EEG  136 (256)
T ss_pred             CcEeeeeeeeecCCcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEC-CCC
Confidence            467777777644 48899999996 599999975 45789999999999999999999999999999999999999 667


Q ss_pred             eeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           79 TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      .+++ .|||++..............++..|+|||.+.+.. .+.++|+||+|+++|+
T Consensus       137 ~~~l-~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~-~~~~~Di~s~G~il~~  191 (256)
T cd06612         137 QAKL-ADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQEIG-YNNKADIWSLGITAIE  191 (256)
T ss_pred             cEEE-cccccchhcccCccccccccCCccccCHHHHhcCC-CCchhhHHHHHHHHHH
Confidence            8899 79999887655433444456788999999987765 6788999999999873

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.94  E-value=4.2e-26  Score=151.23  Aligned_cols=130  Identities=25%  Similarity=0.384  Sum_probs=104.6

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHhhCCcccC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYH---------------PMDSHLIKKFLYCILSGISYCHARKIIHR   64 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~---------------~~~~~~~~~~~~~i~~~l~~lh~~~i~h~   64 (135)
                      .|+++..+++.++ ..+++||++. ++|.+++...+               .+++..+..++.|++.|++|||+++++|+
T Consensus        67 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~  146 (280)
T cd05092          67 QHIVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHR  146 (280)
T ss_pred             CCCceEEEEEecCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecc
Confidence            3667777776544 7889999994 69999997642               47889999999999999999999999999


Q ss_pred             CCCCcceeeecCCCeeEEecccccccccCCCCC--CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           65 DLTTMNLLADIENKTVKIAADSGMAKEIDAPFD--AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        65 dl~~~nil~~~~~~~~~i~~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ||+|+||+++ +.+.+++ +|||++........  ......+++.|+|||.+.+.. .+.++|+||||+++|
T Consensus       147 dlkp~nil~~-~~~~~kL-~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~  215 (280)
T cd05092         147 DLATRNCLVG-QGLVVKI-GDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRK-FTTESDIWSFGVVLW  215 (280)
T ss_pred             cccHhhEEEc-CCCCEEE-CCCCceeEcCCCceeecCCCccccccccCHHHhccCC-cCchhhHHHHHHHHH
Confidence            9999999999 6788999 79999875533211  122333467899999997766 678899999999987

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.94  E-value=3e-26  Score=151.40  Aligned_cols=131  Identities=23%  Similarity=0.351  Sum_probs=105.4

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCc
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYH----------PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTM   69 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~----------~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~   69 (135)
                      .|++++++++... ..+++||++. ++|.+++....          .+++..+..++.|++.|+.|||+++++|+||+|+
T Consensus        69 ~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~  148 (277)
T cd05032          69 HHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAAR  148 (277)
T ss_pred             CceeEEEEEEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChh
Confidence            4677777776544 7899999995 69999997522          3577889999999999999999999999999999


Q ss_pred             ceeeecCCCeeEEecccccccccCCCC--CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           70 NLLADIENKTVKIAADSGMAKEIDAPF--DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        70 nil~~~~~~~~~i~~d~~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ||+++ ..+.+++ +|||+++......  .......++..|+|||.+.+.. .+.++|+||||+++|+
T Consensus       149 nill~-~~~~~kl-~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~e  213 (277)
T cd05032         149 NCMVA-EDLTVKI-GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGV-FTTKSDVWSFGVVLWE  213 (277)
T ss_pred             eEEEc-CCCCEEE-CCcccchhhccCcccccCCCCCccccccCHHHHhcCC-CCcccchHHHHHHHHH
Confidence            99999 6788999 8999987654322  1223345577899999987665 6788999999999873

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.94  E-value=4.5e-26  Score=149.92  Aligned_cols=130  Identities=21%  Similarity=0.378  Sum_probs=105.9

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      .|+++..+++.++ ..+++||++. ++|.+++... +.++...+..++.|++.|+.+||+++++|+|++|+||+++ ..+
T Consensus        65 ~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~-~~~  143 (266)
T cd05033          65 PNIIRLEGVVTKSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVN-SNL  143 (266)
T ss_pred             CCcceEeEEEecCCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEc-CCC
Confidence            3677777766444 7889999995 6999999763 4789999999999999999999999999999999999999 678


Q ss_pred             eeEEecccccccccCCCCCCC--CCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           79 TVKIAADSGMAKEIDAPFDAH--TTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~~--~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .+++ +|||.+..........  ....++..|+|||.+.+.. .+.++|+||+|+++|
T Consensus       144 ~~~l-~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~-~~~~~Dv~slG~~l~  199 (266)
T cd05033         144 VCKV-SDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRK-FTSASDVWSFGIVMW  199 (266)
T ss_pred             CEEE-CccchhhcccccccceeccCCCCCccccChhhhccCC-CccccchHHHHHHHH
Confidence            8899 8999998775222211  1223456799999987665 678899999999987

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.94  E-value=2.2e-26  Score=153.30  Aligned_cols=130  Identities=27%  Similarity=0.471  Sum_probs=104.5

Q ss_pred             ccchhhhccceec-ceeEEEecc-CCCHHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHhhCCccc
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYV-NINLHKFIQQY----------------HPMDSHLIKKFLYCILSGISYCHARKIIH   63 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~-~~~L~~~~~~~----------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h   63 (135)
                      .|+++.++.+.++ ..+++|||+ +++|.+++...                +.+++..+..++.|++.|++|||+.+++|
T Consensus        76 ~~i~~~~~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH  155 (293)
T cd05053          76 KNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIH  155 (293)
T ss_pred             CCeeeEEEEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence            3567777766444 789999999 56999999642                35788899999999999999999999999


Q ss_pred             CCCCCcceeeecCCCeeEEecccccccccCCCCC--CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           64 RDLTTMNLLADIENKTVKIAADSGMAKEIDAPFD--AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        64 ~dl~~~nil~~~~~~~~~i~~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +||+|+||+++ +.+.+++ +|||.+........  ......++..|+|||...+.. .+.++|+||||+++|
T Consensus       156 ~dlkp~Nil~~-~~~~~kL-~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~  225 (293)
T cd05053         156 RDLAARNVLVT-EDHVMKI-ADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLLW  225 (293)
T ss_pred             cccceeeEEEc-CCCeEEe-CccccccccccccceeccCCCCCCccccCHHHhccCC-cCcccceeehhhHHH
Confidence            99999999998 6788999 89999986643321  122233456799999987665 678899999999987

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.94  E-value=3.3e-26  Score=153.70  Aligned_cols=132  Identities=30%  Similarity=0.577  Sum_probs=106.5

Q ss_pred             ccchhhhcccee---cceeEEEeccCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceee
Q 043346            2 QEMMKSMSLWVH---KRENLVFEYVNINLHKFIQQ-----YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLA   73 (135)
Q Consensus         2 ~~~~~~~~~~~~---~~~~lv~e~~~~~L~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~   73 (135)
                      .|++++.+.+..   ...++|||++++++.+.+..     ...+++..+..++.|++.|+.|||+.+++|+||+|+||++
T Consensus        62 ~~i~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~  141 (316)
T cd07842          62 ENVVSLVEVFLEHADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILV  141 (316)
T ss_pred             CCccceEEEEeCCCCceEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEE
Confidence            366777776633   36889999998888887753     1268899999999999999999999999999999999999


Q ss_pred             ecC----CCeeEEecccccccccCCCCC---CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           74 DIE----NKTVKIAADSGMAKEIDAPFD---AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        74 ~~~----~~~~~i~~d~~~~~~~~~~~~---~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      + .    .+.+++ +|||++........   ......+++.|+|||.+.+....+.++|+||+|+++|.
T Consensus       142 ~-~~~~~~~~~kl-~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~  208 (316)
T cd07842         142 M-GEGPERGVVKI-GDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAE  208 (316)
T ss_pred             c-CCCCccceEEE-CCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHH
Confidence            8 5    688999 89999886644322   22334667889999998776557788999999999873

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.94  E-value=4.5e-26  Score=151.19  Aligned_cols=130  Identities=22%  Similarity=0.408  Sum_probs=103.9

Q ss_pred             ccchhhhcccee-cceeEEEeccC-CCHHHHHHhc-----------------CCCCHHHHHHHHHHHHHHHHHHhhCCcc
Q 043346            2 QEMMKSMSLWVH-KRENLVFEYVN-INLHKFIQQY-----------------HPMDSHLIKKFLYCILSGISYCHARKII   62 (135)
Q Consensus         2 ~~~~~~~~~~~~-~~~~lv~e~~~-~~L~~~~~~~-----------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~   62 (135)
                      .|+++..+++.. ...|++||++. ++|.+++...                 ..+++..+..++.|++.|++|||+++++
T Consensus        67 ~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~  146 (283)
T cd05090          67 PNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFV  146 (283)
T ss_pred             CCeeeEEEEEecCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCee
Confidence            367777777644 47899999995 6999998532                 2467888999999999999999999999


Q ss_pred             cCCCCCcceeeecCCCeeEEecccccccccCCCC--CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           63 HRDLTTMNLLADIENKTVKIAADSGMAKEIDAPF--DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        63 h~dl~~~nil~~~~~~~~~i~~d~~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      |+|++|+||+++ ..+.+++ +|||++.......  .......++..|+|||.+.+.. .+.++|+||||+++|
T Consensus       147 H~dlkp~nili~-~~~~~kl-~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~  217 (283)
T cd05090         147 HKDLAARNILIG-EQLHVKI-SDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGK-FSSDSDIWSFGVVLW  217 (283)
T ss_pred             hhccccceEEEc-CCCcEEe-ccccccccccCCcceecccCCCccceecChHHhccCC-CCchhhhHHHHHHHH
Confidence            999999999999 6678899 7999997654321  1223334466799999997665 688999999999987

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.94  E-value=4.5e-26  Score=150.74  Aligned_cols=129  Identities=22%  Similarity=0.358  Sum_probs=107.9

Q ss_pred             ccchhhhcccee-cceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVH-KRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~-~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      +|+++..+.+.. +..++|+|+++ ++|.+++.. +.+++..+..++.|++.|+.|||+++++|+||+|+||+++ +.+.
T Consensus        62 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~-~~~~  139 (277)
T cd06642          62 PYITRYYGSYLKGTKLWIIMEYLGGGSALDLLKP-GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLS-EQGD  139 (277)
T ss_pred             CccHhhhcccccCCceEEEEEccCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEe-CCCC
Confidence            467788777744 47899999995 599988865 5789999999999999999999999999999999999998 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +++ .|||++..............++..|+|||.+.+.. .+.++|+||+|+++|
T Consensus       140 ~~l-~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~  192 (277)
T cd06642         140 VKL-ADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSA-YDFKADIWSLGITAI  192 (277)
T ss_pred             EEE-ccccccccccCcchhhhcccCcccccCHHHhCcCC-CchhhhHHHHHHHHH
Confidence            999 79999876654333334456788899999997765 678899999999987

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.94  E-value=4.1e-26  Score=149.68  Aligned_cols=130  Identities=23%  Similarity=0.334  Sum_probs=105.1

Q ss_pred             ccchhhhccceec-ceeEEEecc-CCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYV-NINLHKFIQQ--YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN   77 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~-~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~   77 (135)
                      .|+++.++.+.+. ..++++|++ +++|.+++.+  ...++...+..++.|++.|++|||+.+++|+||+|+||+++ ..
T Consensus        61 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~-~~  139 (261)
T cd05072          61 DKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVS-ES  139 (261)
T ss_pred             CCeeeEEEEEcCCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEec-CC
Confidence            3667776666444 788999999 5699999975  34678889999999999999999999999999999999999 67


Q ss_pred             CeeEEecccccccccCCCCC-CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           78 KTVKIAADSGMAKEIDAPFD-AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +.+++ .|||.+........ ......++..|+|||...+.. .+.++|+||||+++|
T Consensus       140 ~~~~l-~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~  195 (261)
T cd05072         140 LMCKI-ADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGS-FTIKSDVWSFGILLY  195 (261)
T ss_pred             CcEEE-CCCccceecCCCceeccCCCccceecCCHHHhccCC-CChhhhhhhhHHHHH
Confidence            88899 79999987644322 122334466799999987665 678899999999987

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.94  E-value=5.2e-26  Score=150.45  Aligned_cols=132  Identities=35%  Similarity=0.724  Sum_probs=110.9

Q ss_pred             ccchhhhcccee-cceeEEEeccCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVH-KRENLVFEYVNINLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~-~~~~lv~e~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|+++..+++.. +..++++|+++++|.+++.+. ..+++..+..++.|++.++.+||+++++|+|++|+||+++ +++.
T Consensus        58 ~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~-~~~~  136 (282)
T cd07829          58 PNIVKLLDVIHTERKLYLVFEYCDMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILIN-RDGV  136 (282)
T ss_pred             CCHHHHHhhhhcCCceEEEecCcCcCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEc-CCCC
Confidence            366777777744 488999999988999999875 5799999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||.+...............+..|+|||.+.+....++++|+||+|+++|+
T Consensus       137 ~~l-~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~  191 (282)
T cd07829         137 LKL-ADFGLARAFGIPLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAE  191 (282)
T ss_pred             EEE-ecCCcccccCCCccccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHH
Confidence            999 7999988765543334444567789999999776447888999999999873

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.94  E-value=5.7e-26  Score=149.73  Aligned_cols=131  Identities=22%  Similarity=0.352  Sum_probs=102.0

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeec
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQY----HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI   75 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~   75 (135)
                      .|+++..+.+.+. ..+++|||+. ++|.+++.+.    ...+...+..++.|++.|++|||+.+++|+||||+||+++ 
T Consensus        55 ~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~-  133 (268)
T cd05086          55 PNILQCLGQCVEAIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLT-  133 (268)
T ss_pred             cchhheEEEecCCCccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEc-
Confidence            3677887777544 7899999995 6999999763    2456677889999999999999999999999999999998 


Q ss_pred             CCCeeEEecccccccccCCC--CCCCCCCcccccccCcccccCC------CCCCchhHHHHhhhhhh
Q 043346           76 ENKTVKIAADSGMAKEIDAP--FDAHTTEMVILRYRAPKILFGR------TNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        76 ~~~~~~i~~d~~~~~~~~~~--~~~~~~~~~~~~~~ape~~~~~------~~~~~~~D~wslg~il~  134 (135)
                      .++.+++ +|||++......  ........++..|+|||++.+.      ...+.++|+||+|+++|
T Consensus       134 ~~~~~~l-~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~  199 (268)
T cd05086         134 SDLTVKV-GDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLW  199 (268)
T ss_pred             CCccEEe-cccccccccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHH
Confidence            6788999 799987643221  1122344667889999998432      12467899999999987

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.94  E-value=3.1e-26  Score=150.62  Aligned_cols=130  Identities=19%  Similarity=0.355  Sum_probs=106.5

Q ss_pred             ccchhhhcccee-cceeEEEeccC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeec
Q 043346            2 QEMMKSMSLWVH-KRENLVFEYVN-INLHKFIQQ----YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI   75 (135)
Q Consensus         2 ~~~~~~~~~~~~-~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~   75 (135)
                      .|+++..+.+.. +..++++|++. ++|.+++..    ...+++..+..++.|++.|+.|||+++++|+||+|+||+++ 
T Consensus        62 ~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~-  140 (267)
T cd08228          62 PNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFIT-  140 (267)
T ss_pred             cceeeeeeeEEECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEc-
Confidence            356777766644 47899999996 599888753    34578999999999999999999999999999999999998 


Q ss_pred             CCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           76 ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        76 ~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ..+.+++ +|||.+..............+++.|+|||.+.+.. .+.++|+||+|+++|
T Consensus       141 ~~~~~~l-~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~-~~~~~Di~slG~~l~  197 (267)
T cd08228         141 ATGVVKL-GDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENG-YNFKSDIWSLGCLLY  197 (267)
T ss_pred             CCCCEEE-CccccceeccchhHHHhcCCCCccccChhhhccCC-CCchhhHHHHHHHHH
Confidence            6678899 79999887654433333456788999999997765 678899999999987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.94  E-value=5.5e-26  Score=153.69  Aligned_cols=131  Identities=14%  Similarity=0.168  Sum_probs=102.9

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQ--YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN   77 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~   77 (135)
                      .|+++.++++..+ ..++||||++ ++|.+++..  ...+++..+..++.|++.|++|||+++++|+||||+||+++ ..
T Consensus        59 pniv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~-~~  137 (327)
T cd08227          59 PNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILIS-VD  137 (327)
T ss_pred             CCeeeEEEEEEECCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEe-cC
Confidence            4778888777544 8899999995 699999975  34689999999999999999999999999999999999999 56


Q ss_pred             CeeEEecccccccccCCCCC-------CCCCCcccccccCcccccCC-CCCCchhHHHHhhhhhh
Q 043346           78 KTVKIAADSGMAKEIDAPFD-------AHTTEMVILRYRAPKILFGR-TNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~-------~~~~~~~~~~~~ape~~~~~-~~~~~~~D~wslg~il~  134 (135)
                      +.+++ .||+..........       ......++..|+|||.+.+. ..++.++|+||+||++|
T Consensus       138 ~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~  201 (327)
T cd08227         138 GKVYL-SGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITAC  201 (327)
T ss_pred             CcEEE-cccchhhccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHH
Confidence            77888 78876543321111       11223456779999999764 33678999999999987

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.94  E-value=3.3e-27  Score=154.04  Aligned_cols=127  Identities=30%  Similarity=0.508  Sum_probs=109.9

Q ss_pred             ccchhhhccceec-------ceeEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeee
Q 043346            2 QEMMKSMSLWVHK-------RENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD   74 (135)
Q Consensus         2 ~~~~~~~~~~~~~-------~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~   74 (135)
                      +|+++.+++++..       +.|+|||++..+|.+.+..  .++-.++..++.|+++|++++|+.||+||||||+||++.
T Consensus        75 ~nii~l~n~ftP~~~l~~~~e~y~v~e~m~~nl~~vi~~--elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~  152 (369)
T KOG0665|consen   75 KNIISLLNVFTPQKTLEEFQEVYLVMELMDANLCQVILM--ELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVN  152 (369)
T ss_pred             cceeeeeeccCccccHHHHHhHHHHHHhhhhHHHHHHHH--hcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceec
Confidence            5788888888643       5789999999999998873  477889999999999999999999999999999999999


Q ss_pred             cCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           75 IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        75 ~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                       ....+|+ .|||+++.-... -..++.+.+..|.|||++.+.. +...+|+||+||++.
T Consensus       153 -~~~~lKi-~dfg~ar~e~~~-~~mtpyVvtRyyrapevil~~~-~ke~vdiwSvGci~g  208 (369)
T KOG0665|consen  153 -SDCTLKI-LDFGLARTEDTD-FMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMG  208 (369)
T ss_pred             -chhheee-ccchhhcccCcc-cccCchhheeeccCchheeccC-CcccchhhhhhhHHH
Confidence             7789999 699999865433 3456677888899999999988 888999999999975

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.94  E-value=4e-26  Score=150.28  Aligned_cols=130  Identities=22%  Similarity=0.359  Sum_probs=106.0

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      +|+++..+++.++ ..+++||++. ++|.+++.+. +.++..++..++.|++.|+.+||+++++|+|++|+|++++ .++
T Consensus        65 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~-~~~  143 (267)
T cd05066          65 PNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVN-SNL  143 (267)
T ss_pred             CCcceEEEEEecCCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEEC-CCC
Confidence            4778887777444 7889999995 6999999764 4679999999999999999999999999999999999998 678


Q ss_pred             eeEEecccccccccCCCCCCC---CCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           79 TVKIAADSGMAKEIDAPFDAH---TTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~~---~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .+++ +|||.+..........   .....+..|++||.+.+.. .+.++|+||+|+++|
T Consensus       144 ~~~l-~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~-~~~~~Dv~slG~~l~  200 (267)
T cd05066         144 VCKV-SDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK-FTSASDVWSYGIVMW  200 (267)
T ss_pred             eEEe-CCCCcccccccccceeeecCCCccceeecCHhHhccCc-cCchhhhHHHHHHHH
Confidence            8999 7999998764432211   1122345799999997765 788999999999987

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.94  E-value=6.9e-26  Score=148.65  Aligned_cols=130  Identities=22%  Similarity=0.311  Sum_probs=105.9

Q ss_pred             cchhhhccceecceeEEEeccC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            3 EMMKSMSLWVHKRENLVFEYVN-INLHKFIQQY--HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         3 ~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      |+++.++.+.++..+++||++. ++|.+++.+.  ..++...+..++.|++.|+.|||+.+++|+||+|+||+++ +.+.
T Consensus        62 ~i~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~-~~~~  140 (260)
T cd05069          62 KLVPLYAVVSEEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVG-DNLV  140 (260)
T ss_pred             CeeeEEEEEcCCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEc-CCCe
Confidence            5677777776678899999995 5999999763  3478899999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCC-CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFD-AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||.+........ ......++..|+|||...+.. .+.++|+||||+++|.
T Consensus       141 ~~l-~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~-~~~~~Di~slG~~l~e  195 (260)
T cd05069         141 CKI-ADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKSDVWSFGILLTE  195 (260)
T ss_pred             EEE-CCCccceEccCCcccccCCCccchhhCCHHHhccCC-cChHHHHHHHHHHHHH
Confidence            999 79999876543321 222234566799999987665 7789999999999873

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.94  E-value=5.7e-26  Score=148.70  Aligned_cols=126  Identities=22%  Similarity=0.389  Sum_probs=102.4

Q ss_pred             cchhhhccc--eecceeEEEeccC-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC
Q 043346            3 EMMKSMSLW--VHKRENLVFEYVN-INLHKFIQQYH--PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN   77 (135)
Q Consensus         3 ~~~~~~~~~--~~~~~~lv~e~~~-~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~   77 (135)
                      ++++.+++.  .+...++++|+++ ++|.+++.+..  .+++..+..++.|++.|++++|+++++|+||+|+||+++ ++
T Consensus        60 ~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~-~~  138 (256)
T cd05082          60 NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVS-ED  138 (256)
T ss_pred             CeeeEEEEEEcCCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEc-CC
Confidence            466666654  2346899999995 69999997643  478899999999999999999999999999999999999 77


Q ss_pred             CeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           78 KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +.+++ +|||++.......   .....+..|+|||...+.. .+.++|+||+|+++|
T Consensus       139 ~~~kl-~dfg~~~~~~~~~---~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~i~~  190 (256)
T cd05082         139 NVAKV-SDFGLTKEASSTQ---DTGKLPVKWTAPEALREKK-FSTKSDVWSFGILLW  190 (256)
T ss_pred             CcEEe-cCCccceeccccC---CCCccceeecCHHHHccCC-CCchhhhHHHHHHHH
Confidence            88999 8999987654322   2233456799999987665 678899999999987

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.94  E-value=1.9e-26  Score=151.43  Aligned_cols=130  Identities=25%  Similarity=0.415  Sum_probs=105.7

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQY--HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN   77 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~   77 (135)
                      .|++++++++.+. ..++|+|++. ++|.+++...  ..++......++.|++.|+.|||+++++|++|+++||+++ ++
T Consensus        61 ~ni~~~~g~~~~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~-~~  139 (259)
T PF07714_consen   61 PNIVKLYGFCIENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLD-SN  139 (259)
T ss_dssp             TTBE-EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEE-TT
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cc
Confidence            4788998888744 6899999995 6999999986  6889999999999999999999999999999999999999 67


Q ss_pred             CeeEEecccccccccCCCC--CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           78 KTVKIAADSGMAKEIDAPF--DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +.+|+ +|||++.......  ...........|+|||.+.+.. .+.++|+||||++++
T Consensus       140 ~~~Kl-~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~-~~~ksDVysfG~~l~  196 (259)
T PF07714_consen  140 GQVKL-SDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGE-YTKKSDVYSFGMLLY  196 (259)
T ss_dssp             TEEEE-ESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSE-ESHHHHHHHHHHHHH
T ss_pred             ccccc-ccccccccccccccccccccccccccccccccccccc-ccccccccccccccc
Confidence            89999 7999998763221  2233445667899999997776 788999999999986

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.94  E-value=7.1e-27  Score=162.80  Aligned_cols=130  Identities=21%  Similarity=0.254  Sum_probs=108.1

Q ss_pred             cchhhhccceecceeEEEeccCC-CHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            3 EMMKSMSLWVHKRENLVFEYVNI-NLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         3 ~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      ||+=.++++.++...+|+.+|+| +|+.++.. ..++......+|+.|+++|+.|||.++|+|||||..||++. +...+
T Consensus       449 NIlLFMG~~~~p~~AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~-~~~kV  527 (678)
T KOG0193|consen  449 NILLFMGACMNPPLAIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLH-EDLKV  527 (678)
T ss_pred             hheeeehhhcCCceeeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEc-cCCcE
Confidence            77778888888877999999977 99999975 45788999999999999999999999999999999999999 66899


Q ss_pred             EEecccccccccCC--CCCCCCCCcccccccCcccccCC--CCCCchhHHHHhhhhhh
Q 043346           81 KIAADSGMAKEIDA--PFDAHTTEMVILRYRAPKILFGR--TNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        81 ~i~~d~~~~~~~~~--~~~~~~~~~~~~~~~ape~~~~~--~~~~~~~D~wslg~il~  134 (135)
                      +| .|||++.....  .......-.+...|||||++...  .++++.+||||||+++|
T Consensus       528 kI-gDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~Y  584 (678)
T KOG0193|consen  528 KI-GDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWY  584 (678)
T ss_pred             EE-ecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHH
Confidence            99 79999864421  11222334566789999999543  34788999999999998

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.94  E-value=7.2e-26  Score=148.51  Aligned_cols=130  Identities=22%  Similarity=0.321  Sum_probs=105.4

Q ss_pred             cchhhhccceecceeEEEeccC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            3 EMMKSMSLWVHKRENLVFEYVN-INLHKFIQQY--HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         3 ~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      ++++.+++..+...+++||++. ++|.+++.+.  ..++.+.+..++.|++.|+.+||+++++|+|++|+||+++ +++.
T Consensus        62 ~i~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~-~~~~  140 (260)
T cd05070          62 KLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVG-DGLV  140 (260)
T ss_pred             ceEEEEeEECCCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEe-CCce
Confidence            5666777776668899999995 5999999763  3588999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCC-CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFD-AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||.+........ ......++..|+|||...+.. .+.++|+||||+++|.
T Consensus       141 ~~l-~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~~  195 (260)
T cd05070         141 CKI-ADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKSDVWSFGILLTE  195 (260)
T ss_pred             EEe-CCceeeeeccCcccccccCCCCCccccChHHHhcCC-CcchhhhHHHHHHHHH
Confidence            899 79999976543321 122233456799999987665 6788999999999873

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.94  E-value=4.2e-26  Score=151.19  Aligned_cols=132  Identities=21%  Similarity=0.328  Sum_probs=105.7

Q ss_pred             ccchhhhccce-------ecceeEEEeccC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcce
Q 043346            2 QEMMKSMSLWV-------HKRENLVFEYVN-INLHKFIQQ--YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNL   71 (135)
Q Consensus         2 ~~~~~~~~~~~-------~~~~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~ni   71 (135)
                      +|+++..+.+.       +...+++|||++ ++|.+++..  ...+++..+..++.|++.|+.|||+++++|+|++|+||
T Consensus        73 ~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~ni  152 (282)
T cd06636          73 RNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNV  152 (282)
T ss_pred             CcEEEEeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHE
Confidence            46677766663       236789999995 599999876  34578888999999999999999999999999999999


Q ss_pred             eeecCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccC----CCCCCchhHHHHhhhhhhC
Q 043346           72 LADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFG----RTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        72 l~~~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~----~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +.+.+++ .|||.+..............+++.|+|||.+..    ...++.++|+||+|+++|.
T Consensus       153 li~-~~~~~~l-~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~e  218 (282)
T cd06636         153 LLT-ENAEVKL-VDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIE  218 (282)
T ss_pred             EEC-CCCCEEE-eeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHH
Confidence            999 6778899 799998765443334445678889999999853    2235678999999999873

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.94  E-value=8.4e-26  Score=150.32  Aligned_cols=129  Identities=23%  Similarity=0.377  Sum_probs=102.2

Q ss_pred             cchhhhccce-ecceeEEEecc-CCCHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcc
Q 043346            3 EMMKSMSLWV-HKRENLVFEYV-NINLHKFIQQYH----------PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMN   70 (135)
Q Consensus         3 ~~~~~~~~~~-~~~~~lv~e~~-~~~L~~~~~~~~----------~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~n   70 (135)
                      ++++..+.+. +...+++|||+ +++|.+++.+.+          ..+...+..++.|++.|+.|||+++++|+||+|+|
T Consensus        70 ~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~n  149 (288)
T cd05061          70 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARN  149 (288)
T ss_pred             CeeeEEEEEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChhe
Confidence            5677776664 34789999999 579999997522          23567788999999999999999999999999999


Q ss_pred             eeeecCCCeeEEecccccccccCCCCC--CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           71 LLADIENKTVKIAADSGMAKEIDAPFD--AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        71 il~~~~~~~~~i~~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      |+++ .++.+++ +|||+++.......  ......++..|+|||.+.+.. .+.++|+||+|+++|
T Consensus       150 ili~-~~~~~~L-~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~-~~~~~DvwslG~~l~  212 (288)
T cd05061         150 CMVA-HDFTVKI-GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGV-FTTSSDMWSFGVVLW  212 (288)
T ss_pred             EEEc-CCCcEEE-CcCCccccccccccccccCCCcccccccCHHHhccCC-CChHhHHHHHHHHHH
Confidence            9999 6788999 89999876543221  122234466799999987765 688999999999987

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.94  E-value=6e-26  Score=150.92  Aligned_cols=129  Identities=18%  Similarity=0.353  Sum_probs=107.8

Q ss_pred             cchhhhccce-ecceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            3 EMMKSMSLWV-HKRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         3 ~~~~~~~~~~-~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      |+++..+.+. .++.++++|++. ++|.+++.. ++++...+..++.|++.+++++|+++++|+||+|+||+++ .++.+
T Consensus        77 ~vv~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~-~~~~~  154 (285)
T cd06648          77 NIVEMYSSYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLT-SDGRV  154 (285)
T ss_pred             ChheEEEEEEcCCeEEEEEeccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEc-CCCcE
Confidence            5666666653 448899999995 699999887 6789999999999999999999999999999999999999 67889


Q ss_pred             EEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           81 KIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ++ +|||.+..............+++.|+|||.+.+.. .+.++|+||+|+++|.
T Consensus       155 ~l-~d~g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slGv~l~e  207 (285)
T cd06648         155 KL-SDFGFCAQVSKEVPRRKSLVGTPYWMAPEVISRLP-YGTEVDIWSLGIMVIE  207 (285)
T ss_pred             EE-cccccchhhccCCcccccccCCccccCHHHhcCCC-CCCcccHHHHHHHHHH
Confidence            99 79998876544433344456888999999997765 6788999999999873

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.94  E-value=3.6e-26  Score=154.60  Aligned_cols=131  Identities=32%  Similarity=0.542  Sum_probs=110.4

Q ss_pred             cchhhhccceec------ceeEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecC
Q 043346            3 EMMKSMSLWVHK------RENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE   76 (135)
Q Consensus         3 ~~~~~~~~~~~~------~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~   76 (135)
                      |++++.+++...      ..|++||+++++|.+.+.++..+++..+..++.|++.|+++||+.|++|+||+|+||+++ .
T Consensus        60 ~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~-~  138 (330)
T cd07834          60 NIIGLLDILRPPSPEDFNDVYIVTELMETDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVN-S  138 (330)
T ss_pred             chhhhhhhhcccCcccccceEEEecchhhhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc-C
Confidence            567777666443      579999999889999998877899999999999999999999999999999999999999 6


Q ss_pred             CCeeEEecccccccccCCCC---CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           77 NKTVKIAADSGMAKEIDAPF---DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        77 ~~~~~i~~d~~~~~~~~~~~---~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ++.+++ +|||.+.......   .......+++.|+|||.+.+....+.++|+||+|+++|+
T Consensus       139 ~~~~~L-~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~  199 (330)
T cd07834         139 NCDLKI-CDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAE  199 (330)
T ss_pred             CCCEEE-cccCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHH
Confidence            688999 7999998765543   123345678889999999877457889999999999873

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.94  E-value=5.7e-26  Score=150.34  Aligned_cols=131  Identities=33%  Similarity=0.648  Sum_probs=110.1

Q ss_pred             cchhhhcccee-cceeEEEeccCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            3 EMMKSMSLWVH-KRENLVFEYVNINLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         3 ~~~~~~~~~~~-~~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      ++++..+.+.. ...++++|++++++.+++.. ...+++..+..++.|++.|+.+||+.+++|+||+|+||+++ .++.+
T Consensus        59 ~i~~~~~~~~~~~~~~~v~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~-~~~~~  137 (283)
T cd05118          59 NIIKLLDVFRHKGDLYLVFEFMDTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLIN-TEGVL  137 (283)
T ss_pred             CcchHHHhhccCCCEEEEEeccCCCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEEC-CCCcE
Confidence            56777776644 47899999998899998877 45889999999999999999999999999999999999999 67889


Q ss_pred             EEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           81 KIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ++ +|||.+..............++..|+|||.+.+....+.++|+||+|+++|+
T Consensus       138 ~l-~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~  191 (283)
T cd05118         138 KL-ADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAE  191 (283)
T ss_pred             EE-eeeeeeEecCCCcccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHH
Confidence            99 7999988775543333345577889999999776457889999999999874

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.94  E-value=5.6e-26  Score=149.02  Aligned_cols=129  Identities=23%  Similarity=0.380  Sum_probs=105.9

Q ss_pred             cchhhhccceecceeEEEecc-CCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            3 EMMKSMSLWVHKRENLVFEYV-NINLHKFIQQ--YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         3 ~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      |+++..+++.+...+++||++ +++|.+++..  ...++...+..++.|++.|+++||+.+++|+||+|+|++++ +++.
T Consensus        62 ~i~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~-~~~~  140 (260)
T cd05067          62 RLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVS-ETLC  140 (260)
T ss_pred             CeeeEEEEEccCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEc-CCCC
Confidence            566777777777889999999 4699999875  34678899999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCC-CCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAP-FDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~-~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +++ .|||.+...... ........++..|+|||.+.+.. .+.++|+||+|+++|
T Consensus       141 ~~l-~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~-~~~~~Di~slG~~l~  194 (260)
T cd05067         141 CKI-ADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT-FTIKSDVWSFGILLT  194 (260)
T ss_pred             EEE-ccCcceeecCCCCcccccCCcccccccCHHHhccCC-cCcccchHHHHHHHH
Confidence            899 799998766522 22223334567899999987665 678899999999987

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=6.9e-26  Score=152.41  Aligned_cols=130  Identities=21%  Similarity=0.294  Sum_probs=105.8

Q ss_pred             cchhhhccceec-ceeEEEeccC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            3 EMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQY--HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         3 ~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      ++++..+.+.+. ..+++||++. ++|.+++...  ..+++.....++.|++.|++|||+++++|+||||+||+++ .++
T Consensus        62 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~-~~~  140 (316)
T cd05574          62 FLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLH-ESG  140 (316)
T ss_pred             CchhheeeeecCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEc-CCC
Confidence            567777776444 7899999995 5999998763  5689999999999999999999999999999999999999 667


Q ss_pred             eeEEecccccccccCCCCC-----------------------------CCCCCcccccccCcccccCCCCCCchhHHHHh
Q 043346           79 TVKIAADSGMAKEIDAPFD-----------------------------AHTTEMVILRYRAPKILFGRTNCFAAIDMWAV  129 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~ape~~~~~~~~~~~~D~wsl  129 (135)
                      .+++ .|||++........                             ......++..|+|||...+.. .+.++|+|||
T Consensus       141 ~~~l-~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Di~sl  218 (316)
T cd05574         141 HIML-SDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDG-HGSAVDWWTL  218 (316)
T ss_pred             CEEE-eecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCC-CCchHHHHHH
Confidence            8898 79998875432111                             112346788899999997765 6789999999


Q ss_pred             hhhhhC
Q 043346          130 LYLLRW  135 (135)
Q Consensus       130 g~il~~  135 (135)
                      |+++|.
T Consensus       219 G~ll~~  224 (316)
T cd05574         219 GILLYE  224 (316)
T ss_pred             HHHHHH
Confidence            999873

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.94  E-value=5.7e-26  Score=150.34  Aligned_cols=129  Identities=23%  Similarity=0.270  Sum_probs=106.3

Q ss_pred             cchhhhccce-ecceeEEEeccC-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            3 EMMKSMSLWV-HKRENLVFEYVN-INLHKFIQQYH--PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         3 ~~~~~~~~~~-~~~~~lv~e~~~-~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      ++++....+. ++..|++|||++ ++|.+++.+..  .+++..+..++.|++.|+.++|+++++|+||+|+||+++ .++
T Consensus        54 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~-~~~  132 (277)
T cd05577          54 FIVSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLD-DHG  132 (277)
T ss_pred             CEeeeeeEEecCCeEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC-CCC
Confidence            5666665553 447899999996 69999997755  789999999999999999999999999999999999999 678


Q ss_pred             eeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           79 TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      .+++ +|||.+...... .......++..|+|||.+.+.. .+.++|+||+|+++|+
T Consensus       133 ~~~l-~dfg~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~-~~~~~Di~slG~il~~  186 (277)
T cd05577         133 NVRI-SDLGLAVELKGG-KKIKGRAGTPGYMAPEVLQGEV-YDFSVDWFALGCTLYE  186 (277)
T ss_pred             CEEE-ccCcchhhhccC-CccccccCCCCcCCHHHhcCCC-CCchhhhHHHHHHHHH
Confidence            8899 799988765432 2223445677899999997766 7788999999999873

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.94  E-value=8.4e-26  Score=148.44  Aligned_cols=129  Identities=20%  Similarity=0.369  Sum_probs=106.8

Q ss_pred             cchhhhcccee-cceeEEEeccC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecC
Q 043346            3 EMMKSMSLWVH-KRENLVFEYVN-INLHKFIQQ----YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE   76 (135)
Q Consensus         3 ~~~~~~~~~~~-~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~   76 (135)
                      ++++.++.+.+ +..+++|||++ ++|.+++..    ...+++..+..++.|++.|+.++|+.+++|+||+|+||+++ .
T Consensus        63 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~-~  141 (267)
T cd08224          63 NVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFIT-A  141 (267)
T ss_pred             CeeeeeeeeecCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEEC-C
Confidence            56666666644 47889999995 699998864    24578999999999999999999999999999999999998 6


Q ss_pred             CCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           77 NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        77 ~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ++.+++ .|||.+..............+++.|+|||.+.+.. .+.++|+||+|+++|
T Consensus       142 ~~~~~l-~d~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~-~~~~~Di~slG~il~  197 (267)
T cd08224         142 TGVVKL-GDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENG-YNFKSDIWSLGCLLY  197 (267)
T ss_pred             CCcEEE-eccceeeeccCCCcccceecCCccccCHHHhccCC-CCchhcHHHHHHHHH
Confidence            778899 79999876654444444556788999999997665 678899999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.94  E-value=7.8e-26  Score=150.09  Aligned_cols=131  Identities=30%  Similarity=0.534  Sum_probs=107.7

Q ss_pred             cchhhhccceec-ceeEEEeccCCCHHH-HHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            3 EMMKSMSLWVHK-RENLVFEYVNINLHK-FIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         3 ~~~~~~~~~~~~-~~~lv~e~~~~~L~~-~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      |++++.+.+..+ ..++++|++++++.+ +..+...+++..+..++.|++.|+.+||+.+++|+|++|+||+++ +++.+
T Consensus        61 ~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~-~~~~~  139 (288)
T cd07833          61 NIVNLKEAFRRKGRLYLVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVS-ESGVL  139 (288)
T ss_pred             CeeehhheEEECCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC-CCCCE
Confidence            677777777544 789999999765444 444556789999999999999999999999999999999999999 67889


Q ss_pred             EEecccccccccCCCCC-CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           81 KIAADSGMAKEIDAPFD-AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ++ +|||.+........ ......++..|+|||.+.+....+.++|+||+|+++|+
T Consensus       140 kl-~d~g~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~  194 (288)
T cd07833         140 KL-CDFGFARALRARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAE  194 (288)
T ss_pred             EE-EeeecccccCCCccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHH
Confidence            99 79999887654432 33445678889999999877457889999999999873

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.93  E-value=4.1e-26  Score=154.71  Aligned_cols=130  Identities=31%  Similarity=0.560  Sum_probs=107.2

Q ss_pred             cchhhhccce-----ecceeEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC
Q 043346            3 EMMKSMSLWV-----HKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN   77 (135)
Q Consensus         3 ~~~~~~~~~~-----~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~   77 (135)
                      |++++.+.+.     ....++++|+++++|.+++...+.+++..+..++.|++.|+.+||+++++|+||+|+||+++ ..
T Consensus        65 ~iv~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~-~~  143 (334)
T cd07855          65 NIIAIRDILRPPGADFKDVYVVMDLMESDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVN-ED  143 (334)
T ss_pred             CccCHHHhccccCCCCceEEEEEehhhhhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc-CC
Confidence            5666665542     23678999999889999998877899999999999999999999999999999999999999 67


Q ss_pred             CeeEEecccccccccCCCCCC----CCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           78 KTVKIAADSGMAKEIDAPFDA----HTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~~----~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +.+++ +|||++.........    .....++..|+|||.+.+....+.++|+||+|+++|
T Consensus       144 ~~~kl-~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~  203 (334)
T cd07855         144 CELRI-GDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFA  203 (334)
T ss_pred             CcEEe-cccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHH
Confidence            88999 899998765433211    123467888999999866554778899999999987

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.93  E-value=7.1e-26  Score=148.86  Aligned_cols=130  Identities=17%  Similarity=0.317  Sum_probs=107.6

Q ss_pred             cchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            3 EMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         3 ~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      |+++..+++.+. ..++++|++. ++|.+++.+.++++++.+..++.|++.+++++|+.+++|+||+|+||+++ +.+.+
T Consensus        63 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~-~~~~~  141 (265)
T cd06631          63 NIVQYLGTCLDDNTISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLM-PNGII  141 (265)
T ss_pred             CEeeEeeEeecCCeEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEEC-CCCeE
Confidence            567777776444 7889999995 59999998878899999999999999999999999999999999999999 67889


Q ss_pred             EEecccccccccCCC------CCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           81 KIAADSGMAKEIDAP------FDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~------~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ++ +|||.+......      ........++..|+|||.+.+.. .+.++|+||+|+++|+
T Consensus       142 ~l-~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~~Dv~slG~~~~~  200 (265)
T cd06631         142 KL-IDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESG-YGRKSDIWSIGCTVFE  200 (265)
T ss_pred             Ee-ccchhhHhhhhccccccccccccccCCCccccChhhhcCCC-CcchhhHHHHHHHHHH
Confidence            99 799988754321      11123446788899999997765 6788999999999873

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.93  E-value=7e-26  Score=167.93  Aligned_cols=132  Identities=21%  Similarity=0.447  Sum_probs=104.9

Q ss_pred             ccchhhhcccee---cceeEEEeccC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhhC-------CcccCCC
Q 043346            2 QEMMKSMSLWVH---KRENLVFEYVN-INLHKFIQQ----YHPMDSHLIKKFLYCILSGISYCHAR-------KIIHRDL   66 (135)
Q Consensus         2 ~~~~~~~~~~~~---~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lh~~-------~i~h~dl   66 (135)
                      .||+++++.+.+   ..+|+||||+. ++|.+++..    .+.+++..++.++.||+.||.|||+.       +|+|+||
T Consensus        72 PNIVrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDL  151 (1021)
T PTZ00266         72 KNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDL  151 (1021)
T ss_pred             CCcCeEEEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccC
Confidence            467888877633   25889999995 699999875    35799999999999999999999984       4999999


Q ss_pred             CCcceeeecC----------------CCeeEEecccccccccCCCCCCCCCCcccccccCcccccCC-CCCCchhHHHHh
Q 043346           67 TTMNLLADIE----------------NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGR-TNCFAAIDMWAV  129 (135)
Q Consensus        67 ~~~nil~~~~----------------~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~~D~wsl  129 (135)
                      ||+||++...                .+.+++ +|||++...... .......+|+.|+|||++.+. ..++.++|+|||
T Consensus       152 KPeNILL~s~~~~lg~i~~~~~n~ng~~iVKL-sDFGlAr~l~~~-s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSL  229 (1021)
T PTZ00266        152 KPQNIFLSTGIRHIGKITAQANNLNGRPIAKI-GDFGLSKNIGIE-SMAHSCVGTPYYWSPELLLHETKSYDDKSDMWAL  229 (1021)
T ss_pred             cHHHeEeecCccccccccccccccCCCCceEE-ccCCcccccccc-ccccccCCCccccCHHHHhccCCCCCchhHHHHH
Confidence            9999999632                234788 899999765433 223345789999999998643 336789999999


Q ss_pred             hhhhhC
Q 043346          130 LYLLRW  135 (135)
Q Consensus       130 g~il~~  135 (135)
                      ||++|.
T Consensus       230 G~ILYE  235 (1021)
T PTZ00266        230 GCIIYE  235 (1021)
T ss_pred             HHHHHH
Confidence            999973

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.93  E-value=1.3e-25  Score=147.43  Aligned_cols=130  Identities=22%  Similarity=0.332  Sum_probs=105.1

Q ss_pred             ccchhhhccceec-ceeEEEecc-CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYV-NINLHKFIQQYH--PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN   77 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~   77 (135)
                      .|+++..+++... ..+++||++ +++|.+++....  .++...+..++.|++.|+.++|+++++|+||+|+||+++ ..
T Consensus        61 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~-~~  139 (261)
T cd05068          61 PKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVG-EN  139 (261)
T ss_pred             CCccceeEEEecCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEc-CC
Confidence            3577777766444 789999999 579999997643  689999999999999999999999999999999999999 67


Q ss_pred             CeeEEecccccccccCCCCCCC-CCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           78 KTVKIAADSGMAKEIDAPFDAH-TTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~~~-~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +.+++ +|||++.......... .....+..|+|||...+.. .+.++|+||||+++|
T Consensus       140 ~~~~l-~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~  195 (261)
T cd05068         140 NICKV-ADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNR-FSIKSDVWSFGILLT  195 (261)
T ss_pred             CCEEE-CCcceEEEccCCcccccCCCcCceeccCccccccCC-CCchhhHHHHHHHHH
Confidence            88999 8999998765332211 1122245799999987665 678899999999987

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.93  E-value=1.2e-25  Score=148.86  Aligned_cols=130  Identities=20%  Similarity=0.353  Sum_probs=106.3

Q ss_pred             ccchhhhccceecceeEEEeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHKRENLVFEYVN-INLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|+++.++++.....++++|++. ++|.+++..+ ..+++..+..++.|++.|++|||+++++|+||+|+||+++ ..+.
T Consensus        69 ~~i~~~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~-~~~~  147 (279)
T cd05057          69 PHVVRLLGICLSSQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVK-TPQH  147 (279)
T ss_pred             CCcceEEEEEecCceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEc-CCCe
Confidence            36777777776678999999994 6999999873 5689999999999999999999999999999999999998 6778


Q ss_pred             eEEecccccccccCCCCCCC--CCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAH--TTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~--~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +++ +|||.++.........  .....+..|+|||.+.+.. .+.++|+||+|+++|
T Consensus       148 ~kL-~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~-~~~~~Di~slG~~l~  202 (279)
T cd05057         148 VKI-TDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRI-YTHKSDVWSYGVTVW  202 (279)
T ss_pred             EEE-CCCcccccccCcccceecCCCcccccccCHHHhhcCC-cCchhhHHHHHHHHH
Confidence            999 8999998765332211  1122346799999986655 678899999999986

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.93  E-value=1.1e-25  Score=148.34  Aligned_cols=130  Identities=18%  Similarity=0.328  Sum_probs=106.9

Q ss_pred             ccchhhhccceecceeEEEeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHKRENLVFEYVN-INLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      +|+++.++++.++..+++||++. ++|.+++.+. ..++...+..++.|++.|++++|+.+++|+||+|+||+++ ..+.
T Consensus        67 ~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~-~~~~  145 (270)
T cd05056          67 PHIVKLIGVITENPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVS-SPDC  145 (270)
T ss_pred             CchhceeEEEcCCCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEe-cCCC
Confidence            46788888887778899999995 6999999874 3589999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCC-CCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDA-HTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~-~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +++ .|||++......... .....++..|+|||.+.+.. .+.++|+||||+++|
T Consensus       146 ~~l-~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~  199 (270)
T cd05056         146 VKL-GDFGLSRYLEDESYYKASKGKLPIKWMAPESINFRR-FTSASDVWMFGVCMW  199 (270)
T ss_pred             eEE-ccCceeeecccccceecCCCCccccccChhhhccCC-CCchhhhHHHHHHHH
Confidence            999 799998765433211 12223456799999987665 678899999999986

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.93  E-value=8.1e-26  Score=153.14  Aligned_cols=130  Identities=28%  Similarity=0.475  Sum_probs=106.0

Q ss_pred             cchhhhccce---e--cceeEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC
Q 043346            3 EMMKSMSLWV---H--KRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN   77 (135)
Q Consensus         3 ~~~~~~~~~~---~--~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~   77 (135)
                      |+++..+...   +  ...++++|+++++|.+.+..+..+++..+..++.|++.|+++||+.|++|+||+|+||+++ ..
T Consensus        63 ~iv~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~-~~  141 (332)
T cd07857          63 NITCLYDMDIVFPGNFNELYLYEELMEADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVN-AD  141 (332)
T ss_pred             ChheeeeeeeeccccCCcEEEEEecccCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEc-CC
Confidence            5566655421   1  2568899999899999998878899999999999999999999999999999999999999 66


Q ss_pred             CeeEEecccccccccCCCCC----CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           78 KTVKIAADSGMAKEIDAPFD----AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~----~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +.+++ +|||.+........    ......+++.|+|||.+.+....+.++|+||+|+++|
T Consensus       142 ~~~kl-~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~  201 (332)
T cd07857         142 CELKI-CDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILA  201 (332)
T ss_pred             CCEEe-CcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHH
Confidence            78999 89999976543221    1233467889999999876555788999999999987

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=6.1e-26  Score=149.46  Aligned_cols=131  Identities=22%  Similarity=0.347  Sum_probs=106.2

Q ss_pred             cchhhhccceec-------ceeEEEeccC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcc
Q 043346            3 EMMKSMSLWVHK-------RENLVFEYVN-INLHKFIQQ----YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMN   70 (135)
Q Consensus         3 ~~~~~~~~~~~~-------~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~n   70 (135)
                      |+++..+.+...       ..+++||+++ ++|.+++..    +..+++..+..++.|++.|+.|||+++++|+||+|+|
T Consensus        64 ~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~n  143 (275)
T cd06608          64 NIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQN  143 (275)
T ss_pred             ChheEEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHH
Confidence            567777776433       3799999996 599888864    3578999999999999999999999999999999999


Q ss_pred             eeeecCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCC----CCCCchhHHHHhhhhhhC
Q 043346           71 LLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGR----TNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        71 il~~~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~----~~~~~~~D~wslg~il~~  135 (135)
                      |+++ ..+.+++ +|||.+..............++..|+|||.+...    ...+.++|+||+|+++|+
T Consensus       144 i~~~-~~~~~~l-~d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~  210 (275)
T cd06608         144 ILLT-KNAEVKL-VDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIE  210 (275)
T ss_pred             EEEc-cCCeEEE-CCCccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHH
Confidence            9999 6788999 8999987665443444556688899999988542    235678999999999874

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.93  E-value=9e-26  Score=149.38  Aligned_cols=130  Identities=19%  Similarity=0.330  Sum_probs=102.6

Q ss_pred             cchhhhcccee-cceeEEEecc-CCCHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceee
Q 043346            3 EMMKSMSLWVH-KRENLVFEYV-NINLHKFIQQYH-------PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLA   73 (135)
Q Consensus         3 ~~~~~~~~~~~-~~~~lv~e~~-~~~L~~~~~~~~-------~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~   73 (135)
                      |+++.++++.+ ...+++||++ +++|.+++.+..       .+++..+..++.|++.|++|||+++++|+||+|+||++
T Consensus        70 ~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~  149 (277)
T cd05036          70 NIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLL  149 (277)
T ss_pred             CEeeEEEEEccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEE
Confidence            57777776644 4788999999 469999997643       47889999999999999999999999999999999999


Q ss_pred             ecCC--CeeEEecccccccccCCCCC--CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           74 DIEN--KTVKIAADSGMAKEIDAPFD--AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        74 ~~~~--~~~~i~~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +..+  ..+++ +|||++........  .......+..|+|||.+.+.. .+.++|+|||||++|
T Consensus       150 ~~~~~~~~~kl-~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~il~  212 (277)
T cd05036         150 TCKGPGRVAKI-ADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGI-FTSKTDVWSFGVLLW  212 (277)
T ss_pred             eccCCCcceEe-ccCccccccCCccceecCCCCCccHhhCCHHHHhcCC-cCchhHHHHHHHHHH
Confidence            8332  35788 89999886632211  111223356799999997766 788999999999987

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.93  E-value=1.3e-25  Score=147.94  Aligned_cols=132  Identities=23%  Similarity=0.330  Sum_probs=106.3

Q ss_pred             ccchhhhcccee-cceeEEEeccC-CCHHHHHHhc-CCC--CHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecC
Q 043346            2 QEMMKSMSLWVH-KRENLVFEYVN-INLHKFIQQY-HPM--DSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE   76 (135)
Q Consensus         2 ~~~~~~~~~~~~-~~~~lv~e~~~-~~L~~~~~~~-~~~--~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~   76 (135)
                      .|+++..+.+.. +..++++|++. ++|.+++... ..+  ++..+..++.|++.|+.|||+++++|+|++|+||+++..
T Consensus        65 ~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~  144 (268)
T cd06624          65 RNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTY  144 (268)
T ss_pred             CCeeeeeeeeccCCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCC
Confidence            367777776644 47889999995 6999999763 445  788899999999999999999999999999999999855


Q ss_pred             CCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCC-CCCchhHHHHhhhhhh
Q 043346           77 NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRT-NCFAAIDMWAVLYLLR  134 (135)
Q Consensus        77 ~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~-~~~~~~D~wslg~il~  134 (135)
                      .+.+++ +|||.+..............+++.|+|||.+.+.. ..+.++|+||+|+++|
T Consensus       145 ~~~~~l-~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~  202 (268)
T cd06624         145 SGVVKI-SDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIV  202 (268)
T ss_pred             CCeEEE-ecchhheecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHH
Confidence            678899 89999876544333334456788999999986542 3677899999999987

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.93  E-value=7.7e-26  Score=149.38  Aligned_cols=130  Identities=18%  Similarity=0.344  Sum_probs=105.3

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcc
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYH---------PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMN   70 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~---------~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~n   70 (135)
                      .|++++++++.+. ..+++||+++ ++|.+++....         .+++..+..++.|++.+++|||+++++|+||+|+|
T Consensus        68 ~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~N  147 (275)
T cd05046          68 KNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARN  147 (275)
T ss_pred             cceeeeEEEECCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccce
Confidence            3677777777543 7899999996 69999998654         68999999999999999999999999999999999


Q ss_pred             eeeecCCCeeEEecccccccccCCCC-CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           71 LLADIENKTVKIAADSGMAKEIDAPF-DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        71 il~~~~~~~~~i~~d~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ++++ ..+.+++ .+||++....... .......+++.|+|||.+.+.. ...++|+||+|+++|
T Consensus       148 ili~-~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~-~~~~~Di~slG~~l~  209 (275)
T cd05046         148 CLVS-SQREVKV-SLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDD-FSTKSDVWSFGVLMW  209 (275)
T ss_pred             EEEe-CCCcEEE-cccccccccCcccccccCCceeEEeecChhhhccCC-CCchhhHHHHHHHHH
Confidence            9998 6678888 7999876443221 1223335567799999987665 678899999999987

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.93  E-value=1.2e-25  Score=146.86  Aligned_cols=130  Identities=28%  Similarity=0.404  Sum_probs=106.4

Q ss_pred             cchhhhcccee-cceeEEEeccC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            3 EMMKSMSLWVH-KRENLVFEYVN-INLHKFIQQY--HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         3 ~~~~~~~~~~~-~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      |+++..+.+.. +..++|+|++. ++|.+++.+.  ..+++..+..++.|++.+++++|+++++|+|++|+||+++.+++
T Consensus        60 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~  139 (256)
T cd08220          60 NIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKM  139 (256)
T ss_pred             chhheeeeEecCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCC
Confidence            56666666643 47899999995 5999999763  35899999999999999999999999999999999999985666


Q ss_pred             eeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           79 TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      .+++ .|||.+...... .......++..|+|||.+.+.. .+.++|+||+|+++|+
T Consensus       140 ~~~l-~d~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~~  193 (256)
T cd08220         140 VVKI-GDFGISKILSSK-SKAYTVVGTPCYISPELCEGKP-YNQKSDIWALGCVLYE  193 (256)
T ss_pred             EEEE-ccCCCceecCCC-ccccccccCCcccCchhccCCC-CCcccchHHHHHHHHH
Confidence            7788 799999876543 2223356788999999997765 6788999999999873

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.93  E-value=1.3e-25  Score=146.88  Aligned_cols=130  Identities=22%  Similarity=0.305  Sum_probs=107.1

Q ss_pred             ccchhhhccceecceeEEEeccC-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHKRENLVFEYVN-INLHKFIQQYH--PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      .|+++..+.+.....++++|+++ ++|.+++.+..  .+++..+..++.|++.|+.++|+++++|+||+|+||+++ ..+
T Consensus        56 ~~iv~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~-~~~  134 (257)
T cd05040          56 ENLIRLYGVVLTHPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLA-SDD  134 (257)
T ss_pred             CCccceeEEEcCCeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEe-cCC
Confidence            36777777776578899999995 69999998753  688999999999999999999999999999999999999 568


Q ss_pred             eeEEecccccccccCCCCC---CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           79 TVKIAADSGMAKEIDAPFD---AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~---~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .+++ +|||.+........   ......++..|+|||.+.+.. .+.++|+||+|+++|
T Consensus       135 ~~kl-~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~-~~~~~Di~slG~~l~  191 (257)
T cd05040         135 KVKI-GDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRT-FSHASDVWMFGVTLW  191 (257)
T ss_pred             EEEe-ccccccccccccccceecccCCCCCceecCHHHhcccC-cCchhhhHHHHHHHH
Confidence            8999 79999987644321   112334567899999987665 678899999999986

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.93  E-value=7.9e-26  Score=149.93  Aligned_cols=130  Identities=19%  Similarity=0.374  Sum_probs=104.0

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHhhCCccc
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQY----------------HPMDSHLIKKFLYCILSGISYCHARKIIH   63 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~----------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h   63 (135)
                      .|+++.++..... ..++++|++. ++|.+++...                ..++...+..++.|++.|+.++|+++++|
T Consensus        68 ~~iv~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H  147 (283)
T cd05091          68 PNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVH  147 (283)
T ss_pred             CCcCeEEEEEcCCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccc
Confidence            3677777776444 7889999995 6999998531                24778889999999999999999999999


Q ss_pred             CCCCCcceeeecCCCeeEEecccccccccCCCCC--CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           64 RDLTTMNLLADIENKTVKIAADSGMAKEIDAPFD--AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        64 ~dl~~~nil~~~~~~~~~i~~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +||||+||+++ +.+.+++ +|||+++.......  ......+++.|+|||.+.+.. .+.++|+||+|+++|
T Consensus       148 ~dlkp~Nil~~-~~~~~kl-~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~  217 (283)
T cd05091         148 KDLATRNVLVF-DKLNVKI-SDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGK-FSIDSDIWSYGVVLW  217 (283)
T ss_pred             cccchhheEec-CCCceEe-cccccccccccchheeeccCccCCccccCHHHHhcCC-CCcchhHHHHHHHHH
Confidence            99999999998 6678999 79999876543221  123334567899999997666 678899999999987

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.93  E-value=1e-25  Score=152.87  Aligned_cols=130  Identities=32%  Similarity=0.530  Sum_probs=105.2

Q ss_pred             ccchhhhcccee------cceeEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeec
Q 043346            2 QEMMKSMSLWVH------KRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI   75 (135)
Q Consensus         2 ~~~~~~~~~~~~------~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~   75 (135)
                      .|++++.++...      ...++++|+++++|.+.+.. ..+++..+..++.|++.|+.+||+++++|+||+|+||+++ 
T Consensus        63 ~niv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~-~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~-  140 (336)
T cd07849          63 ENIIGILDIIRPPSFESFNDVYIVQELMETDLYKLIKT-QHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLN-  140 (336)
T ss_pred             CCcCchhheeecccccccceEEEEehhcccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEC-
Confidence            356666655432      24789999999899888865 5789999999999999999999999999999999999999 


Q ss_pred             CCCeeEEecccccccccCCCCC---CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           76 ENKTVKIAADSGMAKEIDAPFD---AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        76 ~~~~~~i~~d~~~~~~~~~~~~---~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ..+.+++ +|||++........   ......+++.|+|||.+.+....+.++|+||+|+++|
T Consensus       141 ~~~~~kl-~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~  201 (336)
T cd07849         141 TNCDLKI-CDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILA  201 (336)
T ss_pred             CCCCEEE-CcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHH
Confidence            6788999 89999876543221   1233467889999998866544788999999999987

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.93  E-value=1.1e-25  Score=147.11  Aligned_cols=131  Identities=24%  Similarity=0.349  Sum_probs=109.0

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|+++..+.+..+ ..++++||+. ++|.+++.+.+.+++..+..++.|++.|+.+||+.+++|+||+|+||+++ ..+.
T Consensus        62 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~-~~~~  140 (258)
T cd06632          62 PNIVQYLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVD-TNGV  140 (258)
T ss_pred             CCchheeeeEecCCeEEEEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC-CCCC
Confidence            3677777776544 7899999995 59999998877789999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||.+....... ......++..|++||.+......+.++|+||+|+++|+
T Consensus       141 ~kl-~d~~~~~~~~~~~-~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~  194 (258)
T cd06632         141 VKL-ADFGMAKQVVEFS-FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLE  194 (258)
T ss_pred             EEE-ccCccceeccccc-cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHH
Confidence            999 8999987654432 23445678889999998655436788999999999873

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.93  E-value=8.8e-26  Score=149.84  Aligned_cols=131  Identities=21%  Similarity=0.293  Sum_probs=104.9

Q ss_pred             ccchhhhccce------ecceeEEEeccC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcc
Q 043346            2 QEMMKSMSLWV------HKRENLVFEYVN-INLHKFIQQ----YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMN   70 (135)
Q Consensus         2 ~~~~~~~~~~~------~~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~n   70 (135)
                      .|++++++.+.      ++..+++|||++ ++|.+++..    ...+++..+..++.|++.|+.+||+.+++|+|++|+|
T Consensus        75 ~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~n  154 (286)
T cd06638          75 PNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNN  154 (286)
T ss_pred             CCeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHh
Confidence            36777776652      236899999995 599988753    3468889999999999999999999999999999999


Q ss_pred             eeeecCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCC----CCCCchhHHHHhhhhhh
Q 043346           71 LLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGR----TNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        71 il~~~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~----~~~~~~~D~wslg~il~  134 (135)
                      |+++ ..+.+++ .|||++..............+++.|+|||.+.+.    ..++.++|+||+||++|
T Consensus       155 ili~-~~~~~kl-~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~  220 (286)
T cd06638         155 ILLT-TEGGVKL-VDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAI  220 (286)
T ss_pred             EEEC-CCCCEEE-ccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHH
Confidence            9999 5677899 7999987665443334455688999999998532    22577899999999987

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.93  E-value=1.2e-25  Score=150.08  Aligned_cols=129  Identities=24%  Similarity=0.347  Sum_probs=102.9

Q ss_pred             cchhhhccce-ecceeEEEeccC-CCHHHHHHhcC------------CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCC
Q 043346            3 EMMKSMSLWV-HKRENLVFEYVN-INLHKFIQQYH------------PMDSHLIKKFLYCILSGISYCHARKIIHRDLTT   68 (135)
Q Consensus         3 ~~~~~~~~~~-~~~~~lv~e~~~-~~L~~~~~~~~------------~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~   68 (135)
                      |+++.++++. ++..+++|||+. ++|.+++....            .++...+..++.|++.|++|||+++++|+||+|
T Consensus        78 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp  157 (295)
T cd05097          78 NIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLAT  157 (295)
T ss_pred             CcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccCh
Confidence            5677777664 447899999995 69999986532            357888999999999999999999999999999


Q ss_pred             cceeeecCCCeeEEecccccccccCCCCC--CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           69 MNLLADIENKTVKIAADSGMAKEIDAPFD--AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        69 ~nil~~~~~~~~~i~~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +||+++ .++.+++ +|||++........  ......++..|+|||...+.. .+.++|+||||+++|
T Consensus       158 ~Nill~-~~~~~kl-~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwSlG~~l~  222 (295)
T cd05097         158 RNCLVG-NHYTIKI-ADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGK-FTTASDVWAFGVTLW  222 (295)
T ss_pred             hhEEEc-CCCcEEe-cccccccccccCcceeccCcCcCceeecChhhhccCC-cCchhhHHHHHHHHH
Confidence            999999 6778999 89999876533211  112234466899999987766 788999999999987

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.93  E-value=1.8e-25  Score=146.68  Aligned_cols=130  Identities=25%  Similarity=0.391  Sum_probs=103.0

Q ss_pred             ccchhhhccce--ecceeEEEeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC
Q 043346            2 QEMMKSMSLWV--HKRENLVFEYVN-INLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN   77 (135)
Q Consensus         2 ~~~~~~~~~~~--~~~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~   77 (135)
                      .|+++.++.+.  ++..++++|++. ++|.+++.+. ...+...+..++.|++.|+.|||+.+++|+||+|+||+++ ..
T Consensus        56 ~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~-~~  134 (262)
T cd05058          56 PNVLSLLGICLPSEGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLD-ES  134 (262)
T ss_pred             CCcceEEEEeecCCCCcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEc-CC
Confidence            36777777543  336789999995 6999999763 4567778889999999999999999999999999999999 67


Q ss_pred             CeeEEecccccccccCCCC----CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           78 KTVKIAADSGMAKEIDAPF----DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~----~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +.+++ +|||++.......    .......++..|+|||...+.. .+.++|+||||+++|
T Consensus       135 ~~~kl-~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~  193 (262)
T cd05058         135 FTVKV-ADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQK-FTTKSDVWSFGVLLW  193 (262)
T ss_pred             CcEEE-CCccccccccCCcceeecccccCcCCccccChhHhccCc-cchHHHHHHHHHHHH
Confidence            78899 8999987654321    1122334566899999987665 778999999999986

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.93  E-value=6.6e-26  Score=148.49  Aligned_cols=130  Identities=22%  Similarity=0.303  Sum_probs=109.8

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|+++.++.+.++ ..++++|++. ++|.+++.+...+++..+..++.|++.++.+||+++++|+||+|+||+++ +.+.
T Consensus        60 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~-~~~~  138 (258)
T cd05578          60 PFLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLD-EQGH  138 (258)
T ss_pred             CChHHHHHhhcCCCeEEEEEeCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEc-CCCC
Confidence            4677787777544 7899999995 59999998877899999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||.+....... ......++..|+|||.+.+.. .+.++|+||+|+++|+
T Consensus       139 ~~l-~d~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~-~~~~~Di~slG~~l~~  191 (258)
T cd05578         139 VHI-TDFNIATKVTPDT-LTTSTSGTPGYMAPEVLCRQG-YSVAVDWWSLGVTAYE  191 (258)
T ss_pred             EEE-eecccccccCCCc-cccccCCChhhcCHHHHcccC-CCCcccchhhHHHHHH
Confidence            899 7999987664432 334456788899999997765 6788999999999873

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.93  E-value=9.4e-26  Score=153.06  Aligned_cols=130  Identities=32%  Similarity=0.545  Sum_probs=107.7

Q ss_pred             ccchhhhcccee---cceeEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVH---KRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~---~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      .|++++++.+..   ...++|||+++++|.+++.++ .+++.....++.|++.|+.+||+.+++|+||+|+||+++ ..+
T Consensus        67 ~ni~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~-~~~  144 (337)
T cd07852          67 PNIVKLLNVIKAENDKDIYLVFEYMETDLHAVIRAN-ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLN-SDC  144 (337)
T ss_pred             CCccceeeeeccCCCceEEEEecccccCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc-CCC
Confidence            467788776632   257999999999999998875 788899999999999999999999999999999999999 778


Q ss_pred             eeEEecccccccccCCCCC-----CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           79 TVKIAADSGMAKEIDAPFD-----AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~-----~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .+++ +|||.+........     ......++..|+|||.+.+....+.++|+||+|+++|
T Consensus       145 ~~kl-~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~  204 (337)
T cd07852         145 RVKL-ADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILG  204 (337)
T ss_pred             cEEE-eeccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHH
Confidence            8999 79999986643321     2233567889999999876555778899999999987

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.93  E-value=1.9e-25  Score=148.04  Aligned_cols=129  Identities=32%  Similarity=0.550  Sum_probs=108.0

Q ss_pred             cchhhhcccee-cceeEEEeccCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            3 EMMKSMSLWVH-KRENLVFEYVNINLHKFIQQYH--PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         3 ~~~~~~~~~~~-~~~~lv~e~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      |++++++.+.+ +..+++||+++++|.+++....  .+++..+..++.|++.++.+||+++++|+||+|+||+++ .++.
T Consensus        59 ~i~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~-~~~~  137 (283)
T cd07830          59 NIVKLKEVFRENDELYFVFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVS-GPEV  137 (283)
T ss_pred             CchhHHHHhhcCCcEEEEEecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEc-CCCC
Confidence            67777777644 4889999999889999998754  789999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +++ +|||.+...... .......++..|+|||.+.+....+.++|+||+|++++
T Consensus       138 ~~l-~d~~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~  190 (283)
T cd07830         138 VKI-ADFGLAREIRSR-PPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMA  190 (283)
T ss_pred             EEE-eecccceeccCC-CCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHH
Confidence            999 799998765433 22234457788999999866555678999999999986

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.93  E-value=1.1e-25  Score=149.31  Aligned_cols=128  Identities=27%  Similarity=0.382  Sum_probs=103.2

Q ss_pred             cchhhhcccee---cceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            3 EMMKSMSLWVH---KRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         3 ~~~~~~~~~~~---~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      |+++..+++..   ...+++||+++ ++|.+++.. ..+++..+..++.|++.|+.+||+++++|+||||+||+++ ..+
T Consensus        67 ~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~-~~~  144 (283)
T cd05080          67 NIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPK-HKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLD-NDR  144 (283)
T ss_pred             CEeeEEEEEecCCCceEEEEecCCCCCCHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEc-CCC
Confidence            56777665532   25789999995 599999877 4689999999999999999999999999999999999998 668


Q ss_pred             eeEEecccccccccCCCCCC---CCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           79 TVKIAADSGMAKEIDAPFDA---HTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~---~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .+++ +|||++.........   .....++..|+|||.+.+.. .+.++|+||||+++|
T Consensus       145 ~~~l-~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~-~~~~~Di~slG~~l~  201 (283)
T cd05080         145 LVKI-GDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENK-FSYASDVWSFGVTLY  201 (283)
T ss_pred             cEEE-eecccccccCCcchhhccCCCCCCCceeeCHhHhcccC-CCcccccHHHHHHHH
Confidence            8899 799998766433211   12234456799999987665 678999999999987

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.93  E-value=2.1e-25  Score=145.43  Aligned_cols=130  Identities=24%  Similarity=0.406  Sum_probs=104.0

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      .|+++.++++... ..+++||++. ++|.+++.. ...+++..+..++.|++.++.++|+++++|+|++|+||+++ ..+
T Consensus        52 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~-~~~  130 (250)
T cd05085          52 PNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVG-ENN  130 (250)
T ss_pred             CCcCeEEEEEecCCccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEc-CCC
Confidence            3667777776444 7889999995 699998875 34678999999999999999999999999999999999998 678


Q ss_pred             eeEEecccccccccCCCCCC-CCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           79 TVKIAADSGMAKEIDAPFDA-HTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~-~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .+++ +|||++......... ......+..|+|||.+.+.. .+.++|+||+|+++|
T Consensus       131 ~~~l-~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~ll~  185 (250)
T cd05085         131 VLKI-SDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGR-YSSESDVWSYGILLW  185 (250)
T ss_pred             eEEE-CCCccceeccccccccCCCCCCcccccCHHHhccCC-CCchhHHHHHHHHHH
Confidence            8899 899998754332211 12223356799999997665 678899999999987

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.93  E-value=1.4e-25  Score=152.06  Aligned_cols=130  Identities=25%  Similarity=0.425  Sum_probs=103.7

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHhhCCccc
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYH----------------PMDSHLIKKFLYCILSGISYCHARKIIH   63 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~----------------~~~~~~~~~~~~~i~~~l~~lh~~~i~h   63 (135)
                      .|+++.++.+.+. ..++++||++ ++|.+++.+..                .++...+..++.|++.|+.|||+++++|
T Consensus        78 ~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH  157 (334)
T cd05100          78 KNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIH  157 (334)
T ss_pred             CCeeeeeEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence            4677777777544 7899999995 69999997532                3667888999999999999999999999


Q ss_pred             CCCCCcceeeecCCCeeEEecccccccccCCCCCC--CCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           64 RDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDA--HTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        64 ~dl~~~nil~~~~~~~~~i~~d~~~~~~~~~~~~~--~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +||+|+||+++ ..+.+++ +|||.++........  .....++..|+|||.+.+.. ++.++|+||||+++|
T Consensus       158 ~dlkp~Nill~-~~~~~kL-~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~  227 (334)
T cd05100         158 RDLAARNVLVT-EDNVMKI-ADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLLW  227 (334)
T ss_pred             cccccceEEEc-CCCcEEE-CCcccceecccccccccccCCCcCceEcCHHHhccCC-cCchhhhHHHHHHHH
Confidence            99999999998 6688999 799998765432211  12223346799999997765 678899999999987

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.93  E-value=1.2e-25  Score=147.38  Aligned_cols=131  Identities=27%  Similarity=0.444  Sum_probs=111.1

Q ss_pred             ccchhhhcccee-cceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhh-CCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVH-KRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHA-RKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~-~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~~~nil~~~~~~   78 (135)
                      .|+++..+++.. +..++++|+++ ++|.+++.....+++.....++.|++.+++++|+ .+++|+|++|+||+++ .++
T Consensus        59 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~-~~~  137 (264)
T cd06623          59 PYVVKCYGAFYKEGEISIVLEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLIN-SKG  137 (264)
T ss_pred             CCeeeEEEEEccCCeEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEEC-CCC
Confidence            356777776644 48899999996 6999999887889999999999999999999999 9999999999999999 678


Q ss_pred             eeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           79 TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      .+++ +|||.+..............++..|+|||.+.+.. .+.++|+||||+++|.
T Consensus       138 ~~~l-~df~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~-~~~~~Dv~slG~il~~  192 (264)
T cd06623         138 EVKI-ADFGISKVLENTLDQCNTFVGTVTYMSPERIQGES-YSYAADIWSLGLTLLE  192 (264)
T ss_pred             CEEE-ccCccceecccCCCcccceeecccccCHhhhCCCC-CCchhhHHHHHHHHHH
Confidence            8899 79999887655444434556788899999997765 7788999999999873

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.93  E-value=1.9e-25  Score=146.16  Aligned_cols=127  Identities=22%  Similarity=0.376  Sum_probs=105.3

Q ss_pred             ccchhhhccce-ecceeEEEeccC-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC
Q 043346            2 QEMMKSMSLWV-HKRENLVFEYVN-INLHKFIQQYH--PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN   77 (135)
Q Consensus         2 ~~~~~~~~~~~-~~~~~lv~e~~~-~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~   77 (135)
                      .|+++..+++. +...+++||+++ ++|.+++....  .+++..+..++.|++.|+.++|+++++|+||+|+||+++ .+
T Consensus        60 ~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~-~~  138 (256)
T cd05039          60 PNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVS-ED  138 (256)
T ss_pred             cceeeeEEEEcCCCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEe-CC
Confidence            36677777765 458899999996 69999998755  689999999999999999999999999999999999999 67


Q ss_pred             CeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           78 KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +.+++ +|||.+........   ....+..|+|||.+.+.. .+.++|+||+|+++|
T Consensus       139 ~~~~l-~d~g~~~~~~~~~~---~~~~~~~~~ape~~~~~~-~~~~~Di~slG~il~  190 (256)
T cd05039         139 LVAKV-SDFGLAKEASQGQD---SGKLPVKWTAPEALREKK-FSTKSDVWSFGILLW  190 (256)
T ss_pred             CCEEE-cccccccccccccc---cCCCcccccCchhhcCCc-CCcHHHHHHHHHHHH
Confidence            88899 79999887633221   233456799999987665 678899999999986

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.93  E-value=1.5e-25  Score=150.17  Aligned_cols=129  Identities=20%  Similarity=0.316  Sum_probs=104.9

Q ss_pred             cchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            3 EMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         3 ~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      |+++.++.+..+ ..+++||+++ ++|.+++...+.+++..+..++.|++.|+.|+|+++++|+|++|+||+++ ..+.+
T Consensus        62 ~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~-~~~~~  140 (305)
T cd05609          62 FVVSMFCSFETKRHLCMVMEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLIT-SMGHI  140 (305)
T ss_pred             CeeeeEEEEecCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEEC-CCCCE
Confidence            567777666444 6899999995 59999998878899999999999999999999999999999999999998 67889


Q ss_pred             EEecccccccccCCCCC---------------CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           81 KIAADSGMAKEIDAPFD---------------AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~~---------------~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ++ +|||.++.......               ......++..|+|||.+.+.. .+.++|+||||+++|
T Consensus       141 ~l-~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~vl~  207 (305)
T cd05609         141 KL-TDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQG-YGKPVDWWAMGIILY  207 (305)
T ss_pred             EE-eeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCC-CCchhhHHHHHHHHH
Confidence            99 79998763211000               111235677899999987765 688899999999987

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.93  E-value=3.8e-26  Score=168.70  Aligned_cols=118  Identities=28%  Similarity=0.413  Sum_probs=98.0

Q ss_pred             ceeEEEeccCC-CHHHHHHhcCCC-CHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEeccccccccc
Q 043346           15 RENLVFEYVNI-NLHKFIQQYHPM-DSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEI   92 (135)
Q Consensus        15 ~~~lv~e~~~~-~L~~~~~~~~~~-~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~~   92 (135)
                      ..|+-||||+. .+.++++.+... .....++++++|++|+.|+|++|++||||||.||+++ ..+.+|| .|||++...
T Consensus       670 ~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd-~~~~VKI-GDFGLAt~~  747 (1351)
T KOG1035|consen  670 ILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLD-SRNSVKI-GDFGLATDL  747 (1351)
T ss_pred             EEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEc-CCCCeee-cccccchhh
Confidence            57899999976 555555554433 4789999999999999999999999999999999999 7899999 799999872


Q ss_pred             C------------------CCCCCCCCCcccccccCcccccCCC--CCCchhHHHHhhhhhh
Q 043346           93 D------------------APFDAHTTEMVILRYRAPKILFGRT--NCFAAIDMWAVLYLLR  134 (135)
Q Consensus        93 ~------------------~~~~~~~~~~~~~~~~ape~~~~~~--~~~~~~D~wslg~il~  134 (135)
                      .                  .+....+..+||.-|+|||++.+..  .+..++|+||||+++|
T Consensus       748 ~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlF  809 (1351)
T KOG1035|consen  748 KENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLF  809 (1351)
T ss_pred             hhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHH
Confidence            1                  1122456679999999999997766  5889999999999987

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.93  E-value=1.1e-25  Score=148.30  Aligned_cols=132  Identities=20%  Similarity=0.264  Sum_probs=101.8

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeee
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYH-----PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD   74 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~   74 (135)
                      .|+++..+.+.+. ..++||||+. ++|.+++....     ..+...+..++.|++.|+.|||+++++|+|+||+||+++
T Consensus        55 ~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~  134 (269)
T cd05087          55 SNLLQCLGQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLT  134 (269)
T ss_pred             CCEeeEEEEEcCCCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEc
Confidence            3677777766444 7889999995 69999987522     356677888999999999999999999999999999999


Q ss_pred             cCCCeeEEecccccccccCCCCC--CCCCCcccccccCcccccCCC------CCCchhHHHHhhhhhhC
Q 043346           75 IENKTVKIAADSGMAKEIDAPFD--AHTTEMVILRYRAPKILFGRT------NCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        75 ~~~~~~~i~~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~------~~~~~~D~wslg~il~~  135 (135)
                       ..+.+++ +|||.+........  ......++..|+|||++.+..      ..+.++|+||+|+++|+
T Consensus       135 -~~~~~kL-~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~e  201 (269)
T cd05087         135 -ADLTVKI-GDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWE  201 (269)
T ss_pred             -CCCcEEE-CCccccccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHH
Confidence             6788999 89999865432211  122345677899999985432      24678999999999873

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.93  E-value=9.9e-26  Score=150.48  Aligned_cols=130  Identities=22%  Similarity=0.346  Sum_probs=103.3

Q ss_pred             ccchhhhcccee-cceeEEEeccC-CCHHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCC
Q 043346            2 QEMMKSMSLWVH-KRENLVFEYVN-INLHKFIQQYH-----------PMDSHLIKKFLYCILSGISYCHARKIIHRDLTT   68 (135)
Q Consensus         2 ~~~~~~~~~~~~-~~~~lv~e~~~-~~L~~~~~~~~-----------~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~   68 (135)
                      .|+++.++++.. +..+++||++. ++|.+++....           .++...+..++.|++.|+++||+.+++|+||||
T Consensus        79 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp  158 (296)
T cd05095          79 PNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLAT  158 (296)
T ss_pred             CCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCCh
Confidence            356777777644 47889999995 69999997632           356678999999999999999999999999999


Q ss_pred             cceeeecCCCeeEEecccccccccCCCCC--CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           69 MNLLADIENKTVKIAADSGMAKEIDAPFD--AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        69 ~nil~~~~~~~~~i~~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +||+++ .++.+++ +|||++........  .......++.|++||...+.. ++.++|+||||+++|
T Consensus       159 ~Nili~-~~~~~~l-~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~~DiwSlG~~l~  223 (296)
T cd05095         159 RNCLVG-KNYTIKI-ADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGK-FTTASDVWAFGVTLW  223 (296)
T ss_pred             heEEEc-CCCCEEe-ccCcccccccCCcceeccCcCcCccccCCHHHHhcCC-ccchhhhhHHHHHHH
Confidence            999998 6788899 79999876533211  112223456799999887665 788999999999987

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.93  E-value=1.4e-25  Score=146.91  Aligned_cols=130  Identities=25%  Similarity=0.394  Sum_probs=107.9

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++.+.+..+ ..|+++|++. ++|.+++.+.+.+++..+..++.|++.|+.++|+++++|+||+|+||+++ ..+.
T Consensus        53 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~-~~~~  131 (265)
T cd05579          53 PYVVKLYYSFQGKKNLYLVMEYLPGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILID-SNGH  131 (265)
T ss_pred             cchhHHHHheecCcEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEc-CCCC
Confidence            3667777666444 7899999995 59999998877899999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCC--------CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFD--------AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~--------~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +++ +|||++........        ......++..|++||...+.. .+.++|+||||+++|
T Consensus       132 ~~l-~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~-~~~~~Dv~slG~~~~  192 (265)
T cd05579         132 LKL-TDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQG-HSKTVDWWSLGCILY  192 (265)
T ss_pred             EEE-EecccchhcccCcccccccccccccCcccCccccCHHHhcCCC-CCcchhhHHHHHHHH
Confidence            999 79998875543311        223445677899999997766 678899999999987

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.93  E-value=1.7e-25  Score=149.82  Aligned_cols=119  Identities=30%  Similarity=0.525  Sum_probs=99.1

Q ss_pred             ceeEEEeccCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEecccccccccC
Q 043346           15 RENLVFEYVNINLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEID   93 (135)
Q Consensus        15 ~~~lv~e~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~~~   93 (135)
                      ..+++||+++++|.+.+... ..+++.++..++.|++.|+.|||+++++|+||+|+||+++ ..+.+++ +|||.+....
T Consensus        93 ~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~-~~~~~kl-~dfg~~~~~~  170 (310)
T cd07865          93 SFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILIT-KDGILKL-ADFGLARAFS  170 (310)
T ss_pred             eEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEC-CCCcEEE-CcCCCccccc
Confidence            45899999988998888763 3789999999999999999999999999999999999999 6788999 8999997664


Q ss_pred             CCCC----CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           94 APFD----AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        94 ~~~~----~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ....    ......++..|+|||.+.+....+.++|+||+|+++|.
T Consensus       171 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~e  216 (310)
T cd07865         171 LSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAE  216 (310)
T ss_pred             CCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHH
Confidence            3321    12234567889999998776546788999999999873

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.93  E-value=1.4e-25  Score=149.38  Aligned_cols=130  Identities=22%  Similarity=0.336  Sum_probs=104.0

Q ss_pred             cchhhhcccee------cceeEEEeccC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcce
Q 043346            3 EMMKSMSLWVH------KRENLVFEYVN-INLHKFIQQ----YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNL   71 (135)
Q Consensus         3 ~~~~~~~~~~~------~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~ni   71 (135)
                      |+++..+.+..      ...++++||++ ++|.++++.    ...+++..+..++.|++.|+++||+++++|+||+|+||
T Consensus        80 ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~ni  159 (291)
T cd06639          80 NVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNI  159 (291)
T ss_pred             CeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHE
Confidence            56666666532      25789999995 599988763    35789999999999999999999999999999999999


Q ss_pred             eeecCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCC----CCCchhHHHHhhhhhh
Q 043346           72 LADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRT----NCFAAIDMWAVLYLLR  134 (135)
Q Consensus        72 l~~~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~----~~~~~~D~wslg~il~  134 (135)
                      +++ ..+.+++ +|||++..............++..|+|||.+....    ..+.++|+||+||++|
T Consensus       160 li~-~~~~~kl-~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~  224 (291)
T cd06639         160 LLT-TEGGVKL-VDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAI  224 (291)
T ss_pred             EEc-CCCCEEE-eecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHH
Confidence            998 6677899 79999886654333334456788899999985433    2467899999999987

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.93  E-value=6.1e-26  Score=150.34  Aligned_cols=131  Identities=20%  Similarity=0.297  Sum_probs=105.8

Q ss_pred             ccchhhhcccee-cceeEEEeccCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhhC-CcccCCCCCcceeeec
Q 043346            2 QEMMKSMSLWVH-KRENLVFEYVNINLHKFIQQ----YHPMDSHLIKKFLYCILSGISYCHAR-KIIHRDLTTMNLLADI   75 (135)
Q Consensus         2 ~~~~~~~~~~~~-~~~~lv~e~~~~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lh~~-~i~h~dl~~~nil~~~   75 (135)
                      .|+++.++.+.. +..++++|+++++|.+++..    ...+++..+..++.|++.|+.|||++ +++|+||+|+||+++ 
T Consensus        60 ~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~-  138 (283)
T cd06617          60 PYTVTFYGALFREGDVWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLIN-  138 (283)
T ss_pred             CCeeeeeEEEecCCcEEEEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEEC-
Confidence            367777777744 48899999999999888764    24689999999999999999999997 999999999999999 


Q ss_pred             CCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCC---CCCCchhHHHHhhhhhhC
Q 043346           76 ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGR---TNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        76 ~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~---~~~~~~~D~wslg~il~~  135 (135)
                      ..+.+++ +|||.+...... .......++..|+|||.+.+.   ...+.++|+||+|+++|+
T Consensus       139 ~~~~~kl-~dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~  199 (283)
T cd06617         139 RNGQVKL-CDFGISGYLVDS-VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIE  199 (283)
T ss_pred             CCCCEEE-eecccccccccc-cccccccCCccccChhhcCCcccccccCccccchhhHHHHHH
Confidence            6788999 799998765432 222334678889999988652   225778999999999873

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.93  E-value=1.6e-25  Score=147.34  Aligned_cols=129  Identities=20%  Similarity=0.367  Sum_probs=103.9

Q ss_pred             cchhhhccceec-ceeEEEeccC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            3 EMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         3 ~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      |+++..+++.+. ..+++||+++ ++|.+++.+ .+.+++.....++.|++.|++++|+++++|+|++|+||+++ ..+.
T Consensus        67 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~-~~~~  145 (268)
T cd05063          67 NIIRLEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVN-SNLE  145 (268)
T ss_pred             CeeEEEEEEccCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEc-CCCc
Confidence            566776666444 7899999995 599999976 35789999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCC---CCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHT---TEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~---~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +++ +|||++...........   ....+..|+|||.+.+.. .+.++|+||+|+++|
T Consensus       146 ~kl-~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~-~~~~~Dv~slG~il~  201 (268)
T cd05063         146 CKV-SDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRK-FTSASDVWSFGIVMW  201 (268)
T ss_pred             EEE-CCCccceecccccccceeccCCCcCceecCHHHhhcCC-cChHhHHHHHHHHHH
Confidence            899 79999876643322111   122345799999997765 678999999999987

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.93  E-value=1.6e-25  Score=147.42  Aligned_cols=130  Identities=21%  Similarity=0.368  Sum_probs=106.1

Q ss_pred             cchhhhcccee---cceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            3 EMMKSMSLWVH---KRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         3 ~~~~~~~~~~~---~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      |+++..+.+.+   +..++++|++. ++|.+++...+.+++.....++.|++.|+++||+++++|+|++|+||+++ .++
T Consensus        65 ~i~~~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~-~~~  143 (266)
T cd06651          65 RIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRD-SAG  143 (266)
T ss_pred             CeeeEEEEEEcCCCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEC-CCC
Confidence            56666666543   36789999995 59999998877899999999999999999999999999999999999998 667


Q ss_pred             eeEEecccccccccCCCC---CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           79 TVKIAADSGMAKEIDAPF---DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~---~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      .+++ .|||++.......   .......++..|+|||.+.+.. .+.++|+||+|+++|.
T Consensus       144 ~~~l-~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~i~~e  201 (266)
T cd06651         144 NVKL-GDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEG-YGRKADVWSLGCTVVE  201 (266)
T ss_pred             CEEE-ccCCCccccccccccCCccccCCccccccCHHHhCCCC-CCchhhhHHHHHHHHH
Confidence            8999 7999987653321   1122345788899999997765 7788999999999873

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.93  E-value=9.3e-26  Score=149.86  Aligned_cols=130  Identities=22%  Similarity=0.379  Sum_probs=108.6

Q ss_pred             cchhhhccc-eecceeEEEeccC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            3 EMMKSMSLW-VHKRENLVFEYVN-INLHKFIQQYH-PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         3 ~~~~~~~~~-~~~~~~lv~e~~~-~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      |+++..+.+ .++..|+++|+++ ++|.+++.... .++...+..++.|++.++.+||+.|++|+|++|+||+++ .++.
T Consensus        76 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~-~~~~  154 (286)
T cd06614          76 NIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLS-KDGS  154 (286)
T ss_pred             CeeEEEEEEEECCEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEc-CCCC
Confidence            566666666 4458899999996 69999998866 899999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||.+..............+++.|++||.+.+.. .+.++|+||+|+++|+
T Consensus       155 ~~l-~d~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~-~~~~~Dv~slGvil~~  208 (286)
T cd06614         155 VKL-ADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKRKD-YGPKVDIWSLGIMCIE  208 (286)
T ss_pred             EEE-CccchhhhhccchhhhccccCCcccCCHhHhcCCC-CCCccccHHHHHHHHH
Confidence            999 79998876554433334445678899999987665 6788999999999873

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.93  E-value=6.1e-28  Score=155.71  Aligned_cols=130  Identities=31%  Similarity=0.535  Sum_probs=108.5

Q ss_pred             cchhhhccceec------ceeEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecC
Q 043346            3 EMMKSMSLWVHK------RENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE   76 (135)
Q Consensus         3 ~~~~~~~~~~~~------~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~   76 (135)
                      |++...+.....      +.|.++|.+..+|+..+-....++.+.++-+++||+.|++|||+.+|.||||||.|++++ +
T Consensus       113 NVLSaLDILQPph~dfFqEiYV~TELmQSDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVN-S  191 (449)
T KOG0664|consen  113 NVLSLLDILQPANPSFFQELYVLTELMQSDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVN-S  191 (449)
T ss_pred             cHHHHHHhcCCCCchHHHHHHHHHHHHHhhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEec-c
Confidence            455555554433      356778888889999888888999999999999999999999999999999999999999 7


Q ss_pred             CCeeEEecccccccccCCCCCCC-CCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           77 NKTVKIAADSGMAKEIDAPFDAH-TTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        77 ~~~~~i~~d~~~~~~~~~~~~~~-~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +..+|| +|||+++......... +..+.|-.|.|||++.|...++...|+||+||++.
T Consensus       192 NCvLKI-CDFGLARvee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFa  249 (449)
T KOG0664|consen  192 NCILKI-CDFGLARTWDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFA  249 (449)
T ss_pred             CceEEe-cccccccccchhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHH
Confidence            889999 9999998765443322 33456778999999999988999999999999974

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.93  E-value=1.1e-25  Score=149.09  Aligned_cols=125  Identities=19%  Similarity=0.353  Sum_probs=102.9

Q ss_pred             ccchhhhcccee-cceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVH-KRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~-~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|+++.++.+.. +..++++||++ ++|..+    ..+++..+..++.|++.|+.|||+.+++|+||+|+||+++ ..+.
T Consensus        59 ~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~-~~~~  133 (279)
T cd06619          59 PYIIGFYGAFFVENRISICTEFMDGGSLDVY----RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVN-TRGQ  133 (279)
T ss_pred             CCeeeEEEEEEECCEEEEEEecCCCCChHHh----hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEEC-CCCC
Confidence            367777776644 47889999996 477543    3568889999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||++......  ......++..|+|||.+.+.. .+.++|+||+|+++|+
T Consensus       134 ~~l-~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslG~~l~~  185 (279)
T cd06619         134 VKL-CDFGVSTQLVNS--IAKTYVGTNAYMAPERISGEQ-YGIHSDVWSLGISFME  185 (279)
T ss_pred             EEE-eeCCcceecccc--cccCCCCChhhcCceeecCCC-CCCcchHHHHHHHHHH
Confidence            999 799998765433  233457888999999998765 7789999999999873

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.93  E-value=3.9e-26  Score=169.26  Aligned_cols=118  Identities=15%  Similarity=0.189  Sum_probs=93.5

Q ss_pred             ceeEEEeccCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeec------------------
Q 043346           15 RENLVFEYVNINLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI------------------   75 (135)
Q Consensus        15 ~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~------------------   75 (135)
                      .++.++|+++++|.+++.. ...+++.++..++.|++.||.|||++||+||||||+||+++.                  
T Consensus        54 ~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~  133 (793)
T PLN00181         54 SIVRALECEDVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSD  133 (793)
T ss_pred             hhhhhhccCCccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCccccc
Confidence            5667888888899999976 356899999999999999999999999999999999999952                  


Q ss_pred             CCCeeEEecccccccccCCC----------------CCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           76 ENKTVKIAADSGMAKEIDAP----------------FDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        76 ~~~~~~i~~d~~~~~~~~~~----------------~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ..+.+++ +|||+++.....                ........+|+.|+|||++.+.. ++.++|+|||||++|
T Consensus       134 ~~~~~ki-~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~-~~~~sDVwSlGviL~  206 (793)
T PLN00181        134 EDATTKS-REIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSS-SNCASDVYRLGVLLF  206 (793)
T ss_pred             ccCcccc-cccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccCC-CCchhhhhhHHHHHH
Confidence            2345566 677777542110                00112245788899999998776 688999999999987

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.93  E-value=2.2e-25  Score=145.75  Aligned_cols=127  Identities=22%  Similarity=0.402  Sum_probs=104.6

Q ss_pred             ccchhhhccceecceeEEEeccC-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHKRENLVFEYVN-INLHKFIQQYH--PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      .|+++..+.+.++..+++||++. ++|.+++....  .++...+..++.|++.|+.++|+++++|+|++|+||+++ ..+
T Consensus        59 ~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~-~~~  137 (254)
T cd05083          59 KNLVRLLGVILHNGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVS-EDG  137 (254)
T ss_pred             CCcCeEEEEEcCCCcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEc-CCC
Confidence            36777777777778899999995 69999997643  578999999999999999999999999999999999998 667


Q ss_pred             eeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           79 TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .+++ +|||.+......   ......+..|+|||.+.+.. .+.++|+||||+++|
T Consensus       138 ~~kl-~Dfg~~~~~~~~---~~~~~~~~~y~~pe~~~~~~-~~~~~Dv~slG~~l~  188 (254)
T cd05083         138 VAKV-SDFGLARVGSMG---VDNSKLPVKWTAPEALKHKK-FSSKSDVWSYGVLLW  188 (254)
T ss_pred             cEEE-CCCccceecccc---CCCCCCCceecCHHHhccCC-cCchhhHHHHHHHHH
Confidence            8899 899988754322   11223356799999987665 778899999999987

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=1.6e-25  Score=147.26  Aligned_cols=130  Identities=22%  Similarity=0.395  Sum_probs=106.3

Q ss_pred             cchhhhcccee---cceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            3 EMMKSMSLWVH---KRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         3 ~~~~~~~~~~~---~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      |+++..+.+.+   +..++++|++. ++|.+++...+.+++..+..++.|++.|+.+||+++++|+|++|+||+++ .++
T Consensus        65 ~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~-~~~  143 (264)
T cd06653          65 RIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRD-SAG  143 (264)
T ss_pred             CcceEEEEEEcCCCCEEEEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc-CCC
Confidence            56666666643   25789999995 59999998877889999999999999999999999999999999999998 677


Q ss_pred             eeEEecccccccccCCCC---CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           79 TVKIAADSGMAKEIDAPF---DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~---~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      .+++ .|||.+.......   .......++..|+|||.+.+.. .+.++|+||+|+++|.
T Consensus       144 ~~~l-~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~  201 (264)
T cd06653         144 NVKL-GDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEG-YGRKADVWSVACTVVE  201 (264)
T ss_pred             CEEE-CccccccccccccccCccccccCCcccccCHhhhcCCC-CCccccHHHHHHHHHH
Confidence            8899 7999998654321   1123346788999999997765 6788999999999873

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.93  E-value=2.3e-25  Score=147.80  Aligned_cols=129  Identities=24%  Similarity=0.388  Sum_probs=102.3

Q ss_pred             cchhhhccce---ecceeEEEecc-CCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC
Q 043346            3 EMMKSMSLWV---HKRENLVFEYV-NINLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN   77 (135)
Q Consensus         3 ~~~~~~~~~~---~~~~~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~   77 (135)
                      |+++..+.+.   ....++++||+ +++|.+++.+. ..+++..+..++.|++.|+.|||++|++|+||||+||+++ ..
T Consensus        66 ~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~-~~  144 (284)
T cd05081          66 NIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVE-SE  144 (284)
T ss_pred             CeeEEEEEEccCCCCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEEC-CC
Confidence            5666655432   23678999999 46999999763 4689999999999999999999999999999999999998 66


Q ss_pred             CeeEEecccccccccCCCCCC---CCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           78 KTVKIAADSGMAKEIDAPFDA---HTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~~---~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +.+++ .|||++.........   .....++..|+|||...+.. .+.++|+||+|+++|
T Consensus       145 ~~~~l-~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~  202 (284)
T cd05081         145 NRVKI-GDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESK-FSVASDVWSFGVVLY  202 (284)
T ss_pred             CeEEE-CCCcccccccCCCcceeecCCCCCceEeeCHHHhccCC-cChHHHHHHHHHHHH
Confidence            88899 799999876433221   11222344699999997765 678999999999987

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.93  E-value=7e-26  Score=148.73  Aligned_cols=129  Identities=22%  Similarity=0.395  Sum_probs=107.9

Q ss_pred             ccchhhhccce-ecceeEEEeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhh-CCcccCCCCCcceeeecCC
Q 043346            2 QEMMKSMSLWV-HKRENLVFEYVN-INLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHA-RKIIHRDLTTMNLLADIEN   77 (135)
Q Consensus         2 ~~~~~~~~~~~-~~~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~~~nil~~~~~   77 (135)
                      .|+++.++.+. ++..++++|+++ ++|.+++... ..+++..+..++.|++.++.++|+ .+++|+||+|+||+++ ..
T Consensus        59 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~-~~  137 (265)
T cd06605          59 PYIVGFYGAFYNNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVN-SR  137 (265)
T ss_pred             CchhhhheeeecCCEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEEC-CC
Confidence            36777777664 448889999996 6999999875 788999999999999999999999 9999999999999999 57


Q ss_pred             CeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           78 KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +.+++ +|||.+.........  ...++..|+|||.+.+.. .+.++|+||+|+++|+
T Consensus       138 ~~~~l-~d~g~~~~~~~~~~~--~~~~~~~y~~PE~~~~~~-~~~~~Dv~slG~~l~~  191 (265)
T cd06605         138 GQIKL-CDFGVSGQLVNSLAK--TFVGTSSYMAPERIQGND-YSVKSDIWSLGLSLIE  191 (265)
T ss_pred             CCEEE-eecccchhhHHHHhh--cccCChhccCHHHHcCCC-CCchhhHHHHHHHHHH
Confidence            88999 799988765433221  266788999999997765 7788999999999874

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.93  E-value=1.8e-25  Score=149.18  Aligned_cols=130  Identities=19%  Similarity=0.333  Sum_probs=107.8

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|+++..+.+..+ ..|+|+|++. ++|.+++.+ ..++...+..++.|++.|+.+||+++++|+|++|+||+++ .++.
T Consensus        76 p~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~-~~~~  153 (293)
T cd06647          76 PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG-MDGS  153 (293)
T ss_pred             CCeeehhheeeeCCcEEEEEecCCCCcHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEc-CCCC
Confidence            3567777766444 7899999995 699999876 4678899999999999999999999999999999999999 6678


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||++..............+++.|++||.+.+.. .+.++|+||+|+++|.
T Consensus       154 ~kL-~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~-~~~~~Dv~slG~ll~~  207 (293)
T cd06647         154 VKL-TDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKA-YGPKVDIWSLGIMAIE  207 (293)
T ss_pred             EEE-ccCcceecccccccccccccCChhhcCchhhccCC-CCchhhHHHHHHHHHH
Confidence            899 79998876654433344456788899999987665 6788999999999873

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.93  E-value=1.6e-25  Score=147.57  Aligned_cols=130  Identities=22%  Similarity=0.362  Sum_probs=102.1

Q ss_pred             cchhhhcccee-------cceeEEEeccC-CCHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCC
Q 043346            3 EMMKSMSLWVH-------KRENLVFEYVN-INLHKFIQQ------YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTT   68 (135)
Q Consensus         3 ~~~~~~~~~~~-------~~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~   68 (135)
                      |+++.++.+.+       ...++++||+. ++|.+++..      ...+++..+..++.|++.|+.|||+++++|+||||
T Consensus        61 ~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp  140 (272)
T cd05075          61 NVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAA  140 (272)
T ss_pred             CcceEEEEEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccch
Confidence            56666654321       24689999995 699988742      23478999999999999999999999999999999


Q ss_pred             cceeeecCCCeeEEecccccccccCCCCC--CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           69 MNLLADIENKTVKIAADSGMAKEIDAPFD--AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        69 ~nil~~~~~~~~~i~~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +||+++ ..+.+++ +|||++........  .......++.|++||...+.. .++++|+||+|+++|+
T Consensus       141 ~Nil~~-~~~~~kl-~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~~Di~slG~il~e  206 (272)
T cd05075         141 RNCMLN-ENMNVCV-ADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRV-YTTKSDVWSFGVTMWE  206 (272)
T ss_pred             hheEEc-CCCCEEE-CCCCcccccCcccceecCCcccCCcccCCHHHccCCC-cChHHHHHHHHHHHHH
Confidence            999998 6788999 79999887643321  122334567899999997765 7889999999999873

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.93  E-value=2.1e-25  Score=151.69  Aligned_cols=118  Identities=31%  Similarity=0.611  Sum_probs=97.8

Q ss_pred             ceeEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEecccccccccCC
Q 043346           15 RENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDA   94 (135)
Q Consensus        15 ~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~~~~   94 (135)
                      ..++++|+++++|.+++.. +.+++..+..++.|++.|++|||+.|++|+||+|+||+++..++.+++ +|||.+.....
T Consensus        90 ~~~lv~e~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl-~dfg~~~~~~~  167 (342)
T cd07854          90 SVYIVQEYMETDLANVLEQ-GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKI-GDFGLARIVDP  167 (342)
T ss_pred             eEEEEeecccccHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEE-CCcccceecCC
Confidence            4789999998899888865 578999999999999999999999999999999999999866677888 79999876533


Q ss_pred             CCC---CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           95 PFD---AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        95 ~~~---~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ...   ......++..|+|||.+.+....+.++|+|||||++|
T Consensus       168 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~  210 (342)
T cd07854         168 HYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFA  210 (342)
T ss_pred             ccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHH
Confidence            211   1223356788999998866555778899999999987

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.93  E-value=2.7e-25  Score=147.87  Aligned_cols=130  Identities=22%  Similarity=0.323  Sum_probs=105.6

Q ss_pred             cchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            3 EMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         3 ~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      +++++...+..+ ..++++|++. ++|.+++.....+++..+..++.|++.|+.+||+.+++|+||+|+||+++ ..+.+
T Consensus        66 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~-~~~~~  144 (290)
T cd05613          66 FLVTLHYAFQTDTKLHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLD-SNGHV  144 (290)
T ss_pred             ChhceeeEeecCCeEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEC-CCCCE
Confidence            455665555444 6789999995 69999998878899999999999999999999999999999999999999 66889


Q ss_pred             EEecccccccccCCCC-CCCCCCcccccccCcccccCCC-CCCchhHHHHhhhhhh
Q 043346           81 KIAADSGMAKEIDAPF-DAHTTEMVILRYRAPKILFGRT-NCFAAIDMWAVLYLLR  134 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~-~~~~~~D~wslg~il~  134 (135)
                      ++ +|||++....... .......++..|+|||.+.+.. ..+.++|+||+|+++|
T Consensus       145 kl-~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~  199 (290)
T cd05613         145 VL-TDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMY  199 (290)
T ss_pred             EE-eeCccceecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHH
Confidence            99 7999987654322 2223456788999999986532 3567899999999987

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.93  E-value=2.5e-25  Score=148.51  Aligned_cols=129  Identities=17%  Similarity=0.329  Sum_probs=105.9

Q ss_pred             cchhhhccce-ecceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            3 EMMKSMSLWV-HKRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         3 ~~~~~~~~~~-~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      |+++..+.+. ++..+++||++. ++|.+++.. +.+++..+..++.|++.++++||+.|++|+|++|+||+++ .++.+
T Consensus        78 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~-~~~~~  155 (292)
T cd06657          78 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLT-HDGRV  155 (292)
T ss_pred             chhheeeEEEeCCEEEEEEecCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC-CCCCE
Confidence            5667776664 448899999995 588887654 5689999999999999999999999999999999999999 66788


Q ss_pred             EEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           81 KIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ++ .|||.+..............+++.|++||.+.+.. .+.++|+||+|+++|+
T Consensus       156 ~l-~dfg~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~-~~~~~Dv~slGvil~e  208 (292)
T cd06657         156 KL-SDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLP-YGPEVDIWSLGIMVIE  208 (292)
T ss_pred             EE-cccccceecccccccccccccCccccCHHHhcCCC-CCchhhHHHHHHHHHH
Confidence            99 79998876644333344456788999999987655 6788999999999873

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.93  E-value=4.7e-25  Score=143.63  Aligned_cols=131  Identities=26%  Similarity=0.353  Sum_probs=109.9

Q ss_pred             ccchhhhcccee-cceeEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVH-KRENLVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~-~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++.+.+.. +..+++||++ +++|.+++.....+++..+..++.|++.++.++|+++++|+|++|+||+++ ..+.
T Consensus        53 ~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~-~~~~  131 (250)
T cd05123          53 PFIVKLHYAFQTEEKLYLVLEYAPGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLD-ADGH  131 (250)
T ss_pred             CcHHHHHHHeecCCeeEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEc-CCCc
Confidence            356677666644 4789999999 679999998877899999999999999999999999999999999999999 6678


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ .|||.+..............++..|++||...+.. .+.++|+||||+++|+
T Consensus       132 ~~l-~d~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~-~~~~~D~~slG~~~~~  185 (250)
T cd05123         132 IKL-TDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKG-YGKAVDWWSLGVLLYE  185 (250)
T ss_pred             EEE-eecCcceecccCCCcccCCcCCccccChHHhCCCC-CCchhhHHHHHHHHHH
Confidence            888 79999887654433344556788899999997765 6778999999999863

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.93  E-value=1.3e-25  Score=146.81  Aligned_cols=131  Identities=22%  Similarity=0.340  Sum_probs=107.4

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQY--HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN   77 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~   77 (135)
                      .|++++.+.+.+. ..++++|++. ++|.+++...  ..+++..+..++.|++.|+.++|+++++|+|++|+||+++ .+
T Consensus        59 ~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~-~~  137 (256)
T cd08218          59 PNIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLT-KD  137 (256)
T ss_pred             CCeeeeEeeecCCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc-CC
Confidence            3567777666444 8889999995 6999998763  3578999999999999999999999999999999999998 66


Q ss_pred             CeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           78 KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +.+++ .|||.+..............+++.|+|||...+.. .+.++|+||+|+++|+
T Consensus       138 ~~~~l-~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~~Dv~slG~i~~~  193 (256)
T cd08218         138 GTIKL-GDFGIARVLNSTVELARTCIGTPYYLSPEICENRP-YNNKSDIWALGCVLYE  193 (256)
T ss_pred             CCEEE-eeccceeecCcchhhhhhccCCccccCHHHhCCCC-CCCccchhHHHHHHHH
Confidence            78899 79999987654433333456788899999997765 6778999999999873

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.93  E-value=2.8e-25  Score=147.68  Aligned_cols=130  Identities=28%  Similarity=0.443  Sum_probs=103.4

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcC----------------------CCCHHHHHHHHHHHHHHHHHHh
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYH----------------------PMDSHLIKKFLYCILSGISYCH   57 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~----------------------~~~~~~~~~~~~~i~~~l~~lh   57 (135)
                      .|+++.++++..+ ..++++|++. ++|.+++....                      .+++..+..++.|++.|+.++|
T Consensus        68 ~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH  147 (288)
T cd05050          68 PNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLS  147 (288)
T ss_pred             CchheEEEEEcCCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHH
Confidence            3567777766444 7899999995 69999997522                      3677888999999999999999


Q ss_pred             hCCcccCCCCCcceeeecCCCeeEEecccccccccCCCCC--CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           58 ARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFD--AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        58 ~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +++++|+||+|+||+++ ..+.+++ +|||.+........  .......+..|+|||.+.+.. ++.++|+||||+++|
T Consensus       148 ~~~i~H~dl~p~nil~~-~~~~~~l-~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~  223 (288)
T cd05050         148 ERKFVHRDLATRNCLVG-ENMVVKI-ADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNR-YTTESDVWAYGVVLW  223 (288)
T ss_pred             hCCeecccccHhheEec-CCCceEE-CccccceecccCccccccCCCccChhhcCHHHHhcCC-CCchhHHHHHHHHHH
Confidence            99999999999999998 6788899 79999876543321  122233456799999987765 788999999999987

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.93  E-value=3.6e-25  Score=144.64  Aligned_cols=130  Identities=25%  Similarity=0.408  Sum_probs=105.6

Q ss_pred             ccchhhhcccee-cceeEEEeccC-CCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC
Q 043346            2 QEMMKSMSLWVH-KRENLVFEYVN-INLHKFIQQYHP--MDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN   77 (135)
Q Consensus         2 ~~~~~~~~~~~~-~~~~lv~e~~~-~~L~~~~~~~~~--~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~   77 (135)
                      .++++.++.+.+ +..+++||++. ++|.+++.....  +++..+..++.|++.|+.+||+.+++|+|++|+||+++ ..
T Consensus        61 ~~i~~~~~~~~~~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~-~~  139 (258)
T smart00219       61 PNIVKLLGVCTEEEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVG-EN  139 (258)
T ss_pred             CchheEEEEEcCCCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEc-cC
Confidence            366777776644 47899999995 699999976443  89999999999999999999999999999999999999 66


Q ss_pred             CeeEEecccccccccCCCCCCCC-CCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           78 KTVKIAADSGMAKEIDAPFDAHT-TEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~~~~-~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +.+++ +|||.+........... ...+++.|+|||.+.+.. .+.++|+||+|+++|
T Consensus       140 ~~~~l-~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~-~~~~~Di~slG~i~~  195 (258)
T smart00219      140 LVVKI-SDFGLSRDLYDDDYYKKKGGKLPIRWMAPESLKDGK-FTSKSDVWSFGVLLW  195 (258)
T ss_pred             CeEEE-cccCCceecccccccccccCCCcccccChHHhccCC-CCcchhHHHHHHHHH
Confidence            78999 89999876654311111 223567899999986554 788999999999986

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.93  E-value=6.1e-25  Score=147.65  Aligned_cols=131  Identities=12%  Similarity=0.174  Sum_probs=105.2

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQ--YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN   77 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~   77 (135)
                      .|+++..+.+.++ ..+++||+++ ++|.+++.+  ...+++..+..++.|++.|++|||+++++|+||+|+||+++ .+
T Consensus        59 ~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~-~~  137 (314)
T cd08216          59 PNILPYVTSFIVDSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLS-GD  137 (314)
T ss_pred             cchhhhhheeecCCeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEe-cC
Confidence            4677887777544 7899999995 699999976  34688999999999999999999999999999999999999 67


Q ss_pred             CeeEEecccccccccCCCCC-------CCCCCcccccccCcccccCC-CCCCchhHHHHhhhhhh
Q 043346           78 KTVKIAADSGMAKEIDAPFD-------AHTTEMVILRYRAPKILFGR-TNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~-------~~~~~~~~~~~~ape~~~~~-~~~~~~~D~wslg~il~  134 (135)
                      +.+++ .||+.+........       ......++..|+|||.+.+. ..++.++|+||+|++++
T Consensus       138 ~~~kl-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~  201 (314)
T cd08216         138 GKVVL-SGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITAC  201 (314)
T ss_pred             CceEE-ecCccceeeccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHH
Confidence            88999 79998865532211       12334566789999998654 23677899999999986

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.93  E-value=6.1e-25  Score=149.53  Aligned_cols=130  Identities=25%  Similarity=0.420  Sum_probs=102.1

Q ss_pred             ccchhhhcccee--cceeEEEeccC-CCHHHHHHhc--------------------------------------------
Q 043346            2 QEMMKSMSLWVH--KRENLVFEYVN-INLHKFIQQY--------------------------------------------   34 (135)
Q Consensus         2 ~~~~~~~~~~~~--~~~~lv~e~~~-~~L~~~~~~~--------------------------------------------   34 (135)
                      .|++++++.+..  ...+++|||++ ++|.+++...                                            
T Consensus        71 ~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (343)
T cd05103          71 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASS  150 (343)
T ss_pred             ccHhhhcceeecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccc
Confidence            367888876643  25789999995 6999998642                                            


Q ss_pred             -----------------------CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEecccccccc
Q 043346           35 -----------------------HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKE   91 (135)
Q Consensus        35 -----------------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~   91 (135)
                                             ..++...+..++.|++.|+.|||+++++|+||||+||+++ ..+.+++ +|||++..
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~-~~~~~kl-~dfg~~~~  228 (343)
T cd05103         151 GFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLS-ENNVVKI-CDFGLARD  228 (343)
T ss_pred             cccCCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEc-CCCcEEE-Eecccccc
Confidence                                   1256677888999999999999999999999999999999 6788999 79999876


Q ss_pred             cCCCCC--CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           92 IDAPFD--AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        92 ~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ......  ......++..|+|||.+.+.. ++.++|+||+|+++|
T Consensus       229 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~  272 (343)
T cd05103         229 IYKDPDYVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLW  272 (343)
T ss_pred             cccCcchhhcCCCCCCcceECcHHhcCCC-CCchhhHHHHHHHHH
Confidence            533211  112233456799999987665 678899999999986

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.93  E-value=4.5e-25  Score=144.25  Aligned_cols=131  Identities=23%  Similarity=0.377  Sum_probs=107.5

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYH--PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN   77 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~   77 (135)
                      .|+++.++.+.++ ..++++|++. ++|.+++.+..  .+++..+..++.|++.|+.+||+++++|+|++|+||+++.+.
T Consensus        59 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~  138 (257)
T cd08225          59 PNIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNG  138 (257)
T ss_pred             CChhhhhheeccCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCC
Confidence            3677777776444 7899999995 69999997633  578999999999999999999999999999999999998554


Q ss_pred             CeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           78 KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ..+++ +|||.+..............+++.|+|||...+.. .+.++|+||+|++++
T Consensus       139 ~~~~l-~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~-~~~~~Dv~slG~il~  193 (257)
T cd08225         139 MVAKL-GDFGIARQLNDSMELAYTCVGTPYYLSPEICQNRP-YNNKTDIWSLGCVLY  193 (257)
T ss_pred             CeEEe-cccccchhccCCcccccccCCCccccCHHHHcCCC-CCchhhHHHHHHHHH
Confidence            56688 89998877655433334456788999999987665 678899999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.93  E-value=2.9e-25  Score=145.62  Aligned_cols=130  Identities=25%  Similarity=0.338  Sum_probs=105.3

Q ss_pred             cchhhhcccee-cceeEEEeccC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            3 EMMKSMSLWVH-KRENLVFEYVN-INLHKFIQQY--HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         3 ~~~~~~~~~~~-~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      |+++..+.+.. ...+++||++. ++|.+++.+.  ..++...+..++.|++.|+.++|+++++|+||+|+||+++ ..+
T Consensus        62 ~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~-~~~  140 (261)
T cd05034          62 KLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVG-ENL  140 (261)
T ss_pred             CEeeeeeeeecCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEc-CCC
Confidence            56777777655 47899999995 6999999764  3689999999999999999999999999999999999999 668


Q ss_pred             eeEEecccccccccCCCCC-CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           79 TVKIAADSGMAKEIDAPFD-AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      .+++ +|||.+........ .......+..|+|||.+.+.. .+.++|+||+|+++|+
T Consensus       141 ~~~l-~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~-~~~~~Di~slG~il~~  196 (261)
T cd05034         141 VCKI-ADFGLARLIEDDEYTAREGAKFPIKWTAPEAANYGR-FTIKSDVWSFGILLTE  196 (261)
T ss_pred             CEEE-CccccceeccchhhhhhhccCCCccccCHHHhccCC-cCchhHHHHHHHHHHH
Confidence            8899 79999876643211 112223456799999997665 7889999999999873

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.93  E-value=4.8e-25  Score=144.69  Aligned_cols=129  Identities=22%  Similarity=0.322  Sum_probs=104.6

Q ss_pred             cchhhhccceecceeEEEeccC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            3 EMMKSMSLWVHKRENLVFEYVN-INLHKFIQQ--YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         3 ~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      |+++..+.+.+...+++||+++ ++|.+++.+  ....+...+..++.|++.|+.++|+++++|+||+|+|++++ ..+.
T Consensus        62 ~i~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~-~~~~  140 (260)
T cd05073          62 KLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVS-ASLV  140 (260)
T ss_pred             CcceEEEEEcCCCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEc-CCCc
Confidence            5667767766677899999995 699999976  34578888999999999999999999999999999999998 6788


Q ss_pred             eEEecccccccccCCCCC-CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFD-AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +++ .|||.+........ ......++..|+|||.+.+.. .+.++|+||||+++|
T Consensus       141 ~~l-~d~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~-~~~~~Di~slG~~l~  194 (260)
T cd05073         141 CKI-ADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGS-FTIKSDVWSFGILLM  194 (260)
T ss_pred             EEE-CCCcceeeccCCCcccccCCcccccccCHhHhccCC-cCccccchHHHHHHH
Confidence            999 79999876543321 122233456799999997655 677899999999987

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.93  E-value=1.8e-26  Score=148.57  Aligned_cols=128  Identities=20%  Similarity=0.382  Sum_probs=104.3

Q ss_pred             chhhhccc-eecceeEEEeccCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhh-CCcccCCCCCcceeeecCCCee
Q 043346            4 MMKSMSLW-VHKRENLVFEYVNINLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHA-RKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         4 ~~~~~~~~-~~~~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      |++-++++ ++...++.||.+...+...++. .+++++..+.++...++.||.||-+ .+++|||+||+||+++ ..|.+
T Consensus       153 IV~c~GyFi~n~dV~IcMelMs~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlD-e~Gni  231 (391)
T KOG0983|consen  153 IVQCFGYFITNTDVFICMELMSTCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLD-ERGNI  231 (391)
T ss_pred             eeeeeeEEeeCchHHHHHHHHHHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEc-cCCCE
Confidence            45566666 4447788888887666666654 5679999999999999999999987 4899999999999999 88999


Q ss_pred             EEecccccccccCCCCCCCCCCcccccccCcccccC--CCCCCchhHHHHhhhhhh
Q 043346           81 KIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFG--RTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~--~~~~~~~~D~wslg~il~  134 (135)
                      |+ +|||.+.++.+. ...+--.|.+.|||||-+.-  .+.+...+|+||||+.++
T Consensus       232 Kl-CDFGIsGrlvdS-kAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlv  285 (391)
T KOG0983|consen  232 KL-CDFGISGRLVDS-KAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLV  285 (391)
T ss_pred             Ee-ecccccceeecc-cccccccCCccccCccccCCCCCCccchhhhhhhhccchh
Confidence            99 999999887665 34455578899999999932  344777899999999886

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.93  E-value=4.7e-25  Score=145.42  Aligned_cols=130  Identities=24%  Similarity=0.474  Sum_probs=106.8

Q ss_pred             cchhhhcccee-cceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            3 EMMKSMSLWVH-KRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         3 ~~~~~~~~~~~-~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      |+++.++++.. +..++|+|++. ++|.+++.+.+.+++..+..++.|++.|+.++|+.+++|+||+|+||+++ .++.+
T Consensus        69 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~-~~~~~  147 (272)
T cd06629          69 NIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVD-ADGIC  147 (272)
T ss_pred             CcceEEEEeccCCceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEc-CCCeE
Confidence            56666666644 47889999994 69999998878899999999999999999999999999999999999999 67889


Q ss_pred             EEecccccccccCCCCC--CCCCCcccccccCcccccCCC-CCCchhHHHHhhhhhh
Q 043346           81 KIAADSGMAKEIDAPFD--AHTTEMVILRYRAPKILFGRT-NCFAAIDMWAVLYLLR  134 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~-~~~~~~D~wslg~il~  134 (135)
                      ++ +|||++........  ......++..|+|||.+.+.. ..+.++|+||+|++++
T Consensus       148 ~l-~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~  203 (272)
T cd06629         148 KI-SDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVL  203 (272)
T ss_pred             EE-eeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHH
Confidence            99 79999876543211  223445778899999986653 3577899999999986

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.93  E-value=8.1e-26  Score=166.67  Aligned_cols=130  Identities=24%  Similarity=0.419  Sum_probs=108.7

Q ss_pred             ccchhhhccceec-ceeEEEecc-CCCHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCccee
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYV-NINLHKFIQQY-------HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLL   72 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~-~~~L~~~~~~~-------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil   72 (135)
                      +|||+..+..-+. ..++++||| +|+|.+|+++.       ..++......++.||++|++||++++.+||||..+|.+
T Consensus       755 pNiv~liGv~l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCL  834 (1025)
T KOG1095|consen  755 PNIVSLIGVCLDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCL  834 (1025)
T ss_pred             cceeeEEEeecCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhhee
Confidence            5899998888555 788999999 57999999874       25788899999999999999999999999999999999


Q ss_pred             eecCCCeeEEecccccccccCCCCC-C-CCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           73 ADIENKTVKIAADSGMAKEIDAPFD-A-HTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        73 ~~~~~~~~~i~~d~~~~~~~~~~~~-~-~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ++ ..+.+|| +|||+++.+..... . .....-...|||||.+.... ++.++|+|||||+++
T Consensus       835 L~-~~r~VKI-aDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~i-FtskSDvWsFGVllW  895 (1025)
T KOG1095|consen  835 LD-ERRVVKI-ADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGI-FTSKSDVWSFGVLLW  895 (1025)
T ss_pred             ec-ccCcEEE-cccchhHhhhhchheeccCccccceecCCHHHHhhcc-cccccchhhhHHHHH
Confidence            99 6699999 89999996543211 1 11224456899999998765 899999999999986

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.93  E-value=4.4e-25  Score=145.44  Aligned_cols=130  Identities=19%  Similarity=0.348  Sum_probs=103.4

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      .|+++..+.+.++ ..+++||+++ ++|.+++.. .+.++...+..++.|++.|+++||+++++|+||+|+||+++ .++
T Consensus        65 ~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~-~~~  143 (269)
T cd05065          65 PNIIHLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVN-SNL  143 (269)
T ss_pred             cCcceEEEEECCCCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEc-CCC
Confidence            4677777776444 7889999995 599999976 45689999999999999999999999999999999999998 677


Q ss_pred             eeEEecccccccccCCCCCC---CCCC--cccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           79 TVKIAADSGMAKEIDAPFDA---HTTE--MVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~---~~~~--~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .+++ +|||.+.........   ....  ..+..|+|||.+.+.. .+.++|+||+|+++|
T Consensus       144 ~~kl-~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~-~~~~~DvwslG~~l~  202 (269)
T cd05065         144 VCKV-SDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRK-FTSASDVWSYGIVMW  202 (269)
T ss_pred             cEEE-CCCccccccccCccccccccccCCCcceeecCHhHhccCc-ccchhhhhhhHHHHH
Confidence            8899 799988755332111   1111  1234699999997665 678899999999987

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.93  E-value=4.3e-25  Score=146.99  Aligned_cols=129  Identities=22%  Similarity=0.395  Sum_probs=103.0

Q ss_pred             cchhhhccceec-ceeEEEeccC-CCHHHHHHhc------------------------CCCCHHHHHHHHHHHHHHHHHH
Q 043346            3 EMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQY------------------------HPMDSHLIKKFLYCILSGISYC   56 (135)
Q Consensus         3 ~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~------------------------~~~~~~~~~~~~~~i~~~l~~l   56 (135)
                      |+++.++.+.++ ..++++||+. ++|.+++.+.                        ..++...+..++.|++.|+.+|
T Consensus        64 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~L  143 (290)
T cd05045          64 HVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYL  143 (290)
T ss_pred             CEeeEEEEEecCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHH
Confidence            677777766444 7889999995 6999988642                        2467888999999999999999


Q ss_pred             hhCCcccCCCCCcceeeecCCCeeEEecccccccccCCCCC--CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           57 HARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFD--AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        57 h~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      |+.+++|+||+|+||+++ +.+.+++ +|||++........  ......++..|+|||...+.. .+.++|+||||++++
T Consensus       144 H~~~ivH~dikp~nill~-~~~~~kl-~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~-~~~~~Di~slG~~l~  220 (290)
T cd05045         144 AEMKLVHRDLAARNVLVA-EGRKMKI-SDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHI-YTTQSDVWSFGVLLW  220 (290)
T ss_pred             HHCCeehhhhhhheEEEc-CCCcEEe-ccccccccccCccchhcccCCCCCccccCHHHHccCC-cchHhHHHHHHHHHH
Confidence            999999999999999998 6788999 79999876533211  112234456899999987665 778899999999986

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.93  E-value=5.8e-25  Score=144.74  Aligned_cols=131  Identities=20%  Similarity=0.347  Sum_probs=102.9

Q ss_pred             ccchhhhcccee-cceeEEEeccC-CCHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCccee
Q 043346            2 QEMMKSMSLWVH-KRENLVFEYVN-INLHKFIQQY-------HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLL   72 (135)
Q Consensus         2 ~~~~~~~~~~~~-~~~~lv~e~~~-~~L~~~~~~~-------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil   72 (135)
                      .|++++.+++.. +..+++||++. ++|.+++...       ..++...+..++.|++.|++|+|+++++|+|++|+||+
T Consensus        59 ~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil  138 (269)
T cd05044          59 PNIVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCL  138 (269)
T ss_pred             CCeeeEeeeecCCCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEE
Confidence            367777776644 47899999995 6999999642       24678899999999999999999999999999999999


Q ss_pred             eecCC----CeeEEecccccccccCCCC--CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           73 ADIEN----KTVKIAADSGMAKEIDAPF--DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        73 ~~~~~----~~~~i~~d~~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ++...    ..+++ +|||++.......  .......++..|+|||.+.+.. .+.++|+||||+++|
T Consensus       139 ~~~~~~~~~~~~~l-~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~  204 (269)
T cd05044         139 VSEKGYDADRVVKI-GDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGK-FTTQSDVWSFGVLMW  204 (269)
T ss_pred             EecCCCCCCcceEE-CCcccccccccccccccCcccCCCccccCHHHHccCC-cccchhHHHHHHHHH
Confidence            98432    26888 8999987653321  1122334567899999997766 788999999999987

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.93  E-value=4e-25  Score=146.87  Aligned_cols=130  Identities=22%  Similarity=0.348  Sum_probs=103.9

Q ss_pred             ccchhhhccceec-ceeEEEeccCCCHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHhhC-CcccCCCCCcceeee
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNINLHKFIQ-----QYHPMDSHLIKKFLYCILSGISYCHAR-KIIHRDLTTMNLLAD   74 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~~L~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~lh~~-~i~h~dl~~~nil~~   74 (135)
                      .|+++.++.+..+ ..+++||++++++.++..     ....+++..+..++.|++.|++|+|+. +++|+||+|+||+++
T Consensus        63 ~~iv~~~~~~~~~~~~~~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~  142 (288)
T cd06616          63 PYIVKFYGALFREGDCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLD  142 (288)
T ss_pred             CCEeeeeeEEecCCcEEEEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEc
Confidence            4678887766444 788999999876655442     235789999999999999999999975 999999999999999


Q ss_pred             cCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCC--CCCCchhHHHHhhhhhh
Q 043346           75 IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGR--TNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        75 ~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~--~~~~~~~D~wslg~il~  134 (135)
                       ..+.+++ +|||++....... ......+++.|+|||.+.+.  ..++.++|+||+|+++|
T Consensus       143 -~~~~~kl-~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~  201 (288)
T cd06616         143 -RNGNIKL-CDFGISGQLVDSI-AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLY  201 (288)
T ss_pred             -cCCcEEE-eecchhHHhccCC-ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHH
Confidence             6678999 7999987654432 22333578889999999765  34778899999999987

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.93  E-value=5.3e-25  Score=143.62  Aligned_cols=129  Identities=25%  Similarity=0.387  Sum_probs=102.8

Q ss_pred             cchhhhccceec-ceeEEEeccC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            3 EMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         3 ~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      ++++..+++.+. ..++++|+++ ++|.+++.+ ...++...+..++.+++.++.++|+++++|+|++|+||+++ .++.
T Consensus        53 ~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~-~~~~  131 (251)
T cd05041          53 NIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVG-ENNV  131 (251)
T ss_pred             CeEEEEEEEecCCCeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEc-CCCc
Confidence            456666665443 7899999995 699999976 45678999999999999999999999999999999999998 6788


Q ss_pred             eEEecccccccccCCCCCCC--CCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAH--TTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~--~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +++ +|||.+..........  .....+..|+|||.+.+.. .+.++|+||||+++|
T Consensus       132 ~~l-~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~-~~~~~Di~slG~i~~  186 (251)
T cd05041         132 LKI-SDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGR-YTSESDVWSYGILLW  186 (251)
T ss_pred             EEE-eeccccccccCCcceeccccCcceeccCChHhhccCC-CCcchhHHHHHHHHH
Confidence            999 7999987654321111  1223355799999987665 778999999999987

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.93  E-value=3.8e-25  Score=146.64  Aligned_cols=129  Identities=29%  Similarity=0.530  Sum_probs=106.2

Q ss_pred             cchhhhccceec-c-----eeEEEeccCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeee
Q 043346            3 EMMKSMSLWVHK-R-----ENLVFEYVNINLHKFIQQYH--PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD   74 (135)
Q Consensus         3 ~~~~~~~~~~~~-~-----~~lv~e~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~   74 (135)
                      |+++..+.+... .     .+++||+++++|.+++....  .+++..+..++.|++.|+.+||+.+++|+|++|+||+++
T Consensus        62 ~i~~~~~~~~~~~~~~~~~~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~  141 (287)
T cd07838          62 NIVRLLDVCHGPRTDRELKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVT  141 (287)
T ss_pred             CcceEEEEEeeccCCCCceeEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEc
Confidence            667777776443 3     88999999889999887633  589999999999999999999999999999999999999


Q ss_pred             cCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           75 IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        75 ~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                       .++.+++ +|||.+....... ......++..|+|||.+.+.. .+.++|+||+|+++|+
T Consensus       142 -~~~~~~l-~dfg~~~~~~~~~-~~~~~~~~~~~~~PE~~~~~~-~~~~~Di~s~G~~l~~  198 (287)
T cd07838         142 -SDGQVKI-ADFGLARIYSFEM-ALTSVVVTLWYRAPEVLLQSS-YATPVDMWSVGCIFAE  198 (287)
T ss_pred             -cCCCEEE-eccCcceeccCCc-ccccccccccccChHHhccCC-CCCcchhhhHHHHHHH
Confidence             5688999 7999987764332 222334678899999998766 6788999999999873

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.93  E-value=3.8e-25  Score=146.40  Aligned_cols=129  Identities=24%  Similarity=0.360  Sum_probs=106.6

Q ss_pred             cchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            3 EMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         3 ~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      |+++.++.+.++ ..++|+|+++ ++|.+++.. ..+++..+..++.|++.++.+||+.+++|+|++|+||+++ ..+.+
T Consensus        63 ~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~-~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~-~~~~~  140 (277)
T cd06641          63 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS-EHGEV  140 (277)
T ss_pred             CEeEEEEEEEeCCeEEEEEEeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEEC-CCCCE
Confidence            567777777544 7899999995 599988865 5689999999999999999999999999999999999998 66788


Q ss_pred             EEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           81 KIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ++ .|||++..............++..|+|||.+.+.. .+.++|+||+|+++|+
T Consensus       141 ~l-~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~-~~~~~Dv~slG~~l~~  193 (277)
T cd06641         141 KL-ADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSA-YDSKADIWSLGITAIE  193 (277)
T ss_pred             EE-eecccceecccchhhhccccCCccccChhhhccCC-CCchhhHHHHHHHHHH
Confidence            99 79999876644333334456788899999987655 6788999999999873

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.93  E-value=5.9e-25  Score=143.76  Aligned_cols=130  Identities=20%  Similarity=0.340  Sum_probs=104.4

Q ss_pred             cchhhhcccee-cceeEEEeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            3 EMMKSMSLWVH-KRENLVFEYVN-INLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         3 ~~~~~~~~~~~-~~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      ++++.++.+.. ...++++|+++ ++|.+++... +.++++.+..++.|++.++++||+++++|+|++|+||+++ .++.
T Consensus        60 ~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~-~~~~  138 (256)
T cd05112          60 KLVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVG-ENQV  138 (256)
T ss_pred             CeeeEEEEEccCCceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEc-CCCe
Confidence            56667666643 47889999995 5999998763 5688999999999999999999999999999999999998 6788


Q ss_pred             eEEecccccccccCCCCC-CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFD-AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||.+........ .......+..|+|||.+.+.. .+.++|+||+|+++|+
T Consensus       139 ~~l-~d~g~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~Dv~slG~~l~e  193 (256)
T cd05112         139 VKV-SDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSK-YSSKSDVWSFGVLMWE  193 (256)
T ss_pred             EEE-CCCcceeecccCcccccCCCccchhhcCHhHhccCC-cChHHHHHHHHHHHHH
Confidence            999 89999876543321 122233456899999997665 6788999999999873

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.93  E-value=5.6e-25  Score=146.08  Aligned_cols=130  Identities=19%  Similarity=0.355  Sum_probs=104.9

Q ss_pred             ccchhhhccce-ecceeEEEeccC-CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHhh-CCcccCCCCCcceeeec
Q 043346            2 QEMMKSMSLWV-HKRENLVFEYVN-INLHKFIQQY---HPMDSHLIKKFLYCILSGISYCHA-RKIIHRDLTTMNLLADI   75 (135)
Q Consensus         2 ~~~~~~~~~~~-~~~~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~~~nil~~~   75 (135)
                      .|+++.++.+. ++..+++|||+. ++|.+++...   ..+++..+..++.|++.|+.|||+ .+++|+||+|+||+++ 
T Consensus        59 ~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~-  137 (286)
T cd06622          59 PYIVDFYGAFFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVN-  137 (286)
T ss_pred             CcHHhhhhheecCCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEEC-
Confidence            36778877664 448899999996 5999888763   378999999999999999999997 5999999999999999 


Q ss_pred             CCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCC-----CCCchhHHHHhhhhhhC
Q 043346           76 ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRT-----NCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        76 ~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~-----~~~~~~D~wslg~il~~  135 (135)
                      .++.+++ +|||.+......  ......+++.|+|||.+.+..     ..+.++|+||+||++|.
T Consensus       138 ~~~~~~l-~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~  199 (286)
T cd06622         138 GNGQVKL-CDFGVSGNLVAS--LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILE  199 (286)
T ss_pred             CCCCEEE-eecCCcccccCC--ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHH
Confidence            5788999 799998765433  223345778899999985432     24678999999999873

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.92  E-value=6.9e-25  Score=151.91  Aligned_cols=95  Identities=27%  Similarity=0.457  Sum_probs=77.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEecccccccccCCCC--CCCCCCcccccccCcccc
Q 043346           37 MDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPF--DAHTTEMVILRYRAPKIL  114 (135)
Q Consensus        37 ~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~~~~~~--~~~~~~~~~~~~~ape~~  114 (135)
                      ++...+..++.|++.|+.|||+++++|+||||+||+++ +.+.+++ +|||++.......  .......++..|+|||.+
T Consensus       236 l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~-~~~~~kL-~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~  313 (401)
T cd05107         236 LSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLIC-EGKLVKI-CDFGLARDIMRDSNYISKGSTFLPLKWMAPESI  313 (401)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEe-CCCEEEE-EecCcceecccccccccCCCcCCCCceeChHHh
Confidence            45567788999999999999999999999999999999 6788999 7999987653221  122234567789999999


Q ss_pred             cCCCCCCchhHHHHhhhhhh
Q 043346          115 FGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus       115 ~~~~~~~~~~D~wslg~il~  134 (135)
                      .+.. .+.++|+||+|+++|
T Consensus       314 ~~~~-~~~~~DvwslGvil~  332 (401)
T cd05107         314 FNNL-YTTLSDVWSFGILLW  332 (401)
T ss_pred             cCCC-CCcHhHHHHHHHHHH
Confidence            7765 678899999999986

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.92  E-value=6.2e-25  Score=146.80  Aligned_cols=118  Identities=31%  Similarity=0.594  Sum_probs=98.6

Q ss_pred             ceeEEEeccCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEecccccccccC
Q 043346           15 RENLVFEYVNINLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEID   93 (135)
Q Consensus        15 ~~~lv~e~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~~~   93 (135)
                      ..++++|++++++.+.+... ..++++.+..++.|++.|+.|||+.+++|+|++|+||+++ +++.+++ +|||.+....
T Consensus        90 ~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~-~~~~~kl-~dfg~~~~~~  167 (302)
T cd07864          90 AFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLN-NKGQIKL-ADFGLARLYN  167 (302)
T ss_pred             cEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC-CCCcEEe-Cccccccccc
Confidence            58899999988888888763 4689999999999999999999999999999999999999 7788999 7999988664


Q ss_pred             CCCC-CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           94 APFD-AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        94 ~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .... ......++..|+|||.+.+....+.++|+||+|++++
T Consensus       168 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~  209 (302)
T cd07864         168 SEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILG  209 (302)
T ss_pred             CCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHH
Confidence            4321 2222345678999999876555678999999999986

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.92  E-value=1.9e-25  Score=141.69  Aligned_cols=130  Identities=18%  Similarity=0.304  Sum_probs=102.9

Q ss_pred             cchhhhcccee------cceeEEEecc-CCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhhCC--cccCCCCCc
Q 043346            3 EMMKSMSLWVH------KRENLVFEYV-NINLHKFIQQ----YHPMDSHLIKKFLYCILSGISYCHARK--IIHRDLTTM   69 (135)
Q Consensus         3 ~~~~~~~~~~~------~~~~lv~e~~-~~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lh~~~--i~h~dl~~~   69 (135)
                      |++++++....      +..|++++|. .|+|.+.+..    +..+++.+++.++.+++.|++++|+..  +.||||||.
T Consensus        79 ~vl~l~dh~l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~  158 (302)
T KOG2345|consen   79 NVLRLVDHQLREEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPA  158 (302)
T ss_pred             chHHHHHHHHHhhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcc
Confidence            56666665522      2489999998 6899999875    347899999999999999999999998  999999999


Q ss_pred             ceeeecCCCeeEEecccccccccCCCCC---------CCCCCcccccccCcccccCCCC--CCchhHHHHhhhhhh
Q 043346           70 NLLADIENKTVKIAADSGMAKEIDAPFD---------AHTTEMVILRYRAPKILFGRTN--CFAAIDMWAVLYLLR  134 (135)
Q Consensus        70 nil~~~~~~~~~i~~d~~~~~~~~~~~~---------~~~~~~~~~~~~ape~~~~~~~--~~~~~D~wslg~il~  134 (135)
                      ||++. +.+..++ .|||.+....-...         .......|..|.|||.+.-+.+  .+.++|+|||||+||
T Consensus       159 NILls-~~~~~vl-~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLY  232 (302)
T KOG2345|consen  159 NILLS-DSGLPVL-MDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLY  232 (302)
T ss_pred             eeEec-CCCceEE-EeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHH
Confidence            99999 6788888 69998865421111         1233466888999999954432  678999999999998

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.92  E-value=6.6e-25  Score=143.78  Aligned_cols=130  Identities=24%  Similarity=0.389  Sum_probs=108.1

Q ss_pred             ccchhhhccce---ecceeEEEeccC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHh-----hCCcccCCCCC
Q 043346            2 QEMMKSMSLWV---HKRENLVFEYVN-INLHKFIQQ----YHPMDSHLIKKFLYCILSGISYCH-----ARKIIHRDLTT   68 (135)
Q Consensus         2 ~~~~~~~~~~~---~~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lh-----~~~i~h~dl~~   68 (135)
                      .|+++..+.+.   +...++++|+++ ++|.+++..    ..++++..+..++.|++.|+.++|     +.+++|+||+|
T Consensus        59 ~~i~~~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p  138 (265)
T cd08217          59 PNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKP  138 (265)
T ss_pred             CccceeeeeeecCCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCH
Confidence            36777766553   235789999995 699999875    357899999999999999999999     89999999999


Q ss_pred             cceeeecCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           69 MNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        69 ~nil~~~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +||+++ ..+.+++ +|||++..............+++.|+|||.+.+.. .+.++|+||||++++
T Consensus       139 ~nili~-~~~~~kl-~d~g~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~-~~~~~Dv~slG~il~  201 (265)
T cd08217         139 ANIFLD-ANNNVKL-GDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHMS-YDEKSDIWSLGCLIY  201 (265)
T ss_pred             HHEEEe-cCCCEEE-ecccccccccCCcccccccccCCCccChhhhcCCC-CCchhHHHHHHHHHH
Confidence            999999 6788999 79999987765543344557889999999997765 678899999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.92  E-value=4.2e-25  Score=146.67  Aligned_cols=128  Identities=17%  Similarity=0.354  Sum_probs=106.5

Q ss_pred             cchhhhcccee-cceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhh-CCcccCCCCCcceeeecCCCe
Q 043346            3 EMMKSMSLWVH-KRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHA-RKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         3 ~~~~~~~~~~~-~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~~~nil~~~~~~~   79 (135)
                      |+++..+.+.. +..++|+||++ ++|.+++.+.+.++...+..++.+++.++.|||+ .+++|+|++|+||+++ +.+.
T Consensus        64 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~-~~~~  142 (284)
T cd06620          64 YIVSFYGAFLNENNICMCMEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVN-SRGQ  142 (284)
T ss_pred             CcceEeeeEecCCEEEEEEecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEEC-CCCc
Confidence            66777767644 47899999995 5999999887889999999999999999999997 5899999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||++......  ......++..|+|||.+.+.. .+.++|+||+||++|.
T Consensus       143 ~~l-~d~gl~~~~~~~--~~~~~~~~~~~~aPE~~~~~~-~~~~~Di~slG~~l~~  194 (284)
T cd06620         143 IKL-CDFGVSGELINS--IADTFVGTSTYMSPERIQGGK-YTVKSDVWSLGISIIE  194 (284)
T ss_pred             EEE-ccCCcccchhhh--ccCccccCcccCCHHHHccCC-CCccchHHHHHHHHHH
Confidence            999 799988654332  122456788999999987664 6788999999999873

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=8.5e-25  Score=142.56  Aligned_cols=129  Identities=22%  Similarity=0.456  Sum_probs=109.2

Q ss_pred             cchhhhcccee-cceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            3 EMMKSMSLWVH-KRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         3 ~~~~~~~~~~~-~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      ++++..+++.. +..++++|+++ ++|.+++...+.+++..+..++.|++.++.++|+.|++|+|++|+||+++ ..+.+
T Consensus        60 ~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~-~~~~~  138 (254)
T cd06627          60 NIVKYIGSIETSDSLYIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTT-KDGVV  138 (254)
T ss_pred             CccEEEEEEEeCCEEEEEEecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEC-CCCCE
Confidence            45666666543 47889999995 59999998878899999999999999999999999999999999999999 56888


Q ss_pred             EEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           81 KIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ++ .|||.+..............++..|+|||...+.. .+.++|+||+|+++|
T Consensus       139 ~l-~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~-~~~~~Dv~~lG~~l~  190 (254)
T cd06627         139 KL-ADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSG-ASTASDIWSLGCTVI  190 (254)
T ss_pred             EE-eccccceecCCCcccccccccchhhcCHhhhcCCC-CCcchhHHHHHHHHH
Confidence            99 79999987765544344556788999999987665 678899999999986

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.92  E-value=4.6e-25  Score=144.83  Aligned_cols=130  Identities=25%  Similarity=0.337  Sum_probs=106.7

Q ss_pred             cchhhhccce-ecceeEEEeccC-CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC
Q 043346            3 EMMKSMSLWV-HKRENLVFEYVN-INLHKFIQQY---HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN   77 (135)
Q Consensus         3 ~~~~~~~~~~-~~~~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~   77 (135)
                      |+++..+.+. ++..++++|++. ++|.+++...   ..+++..+..++.|++.|+.+||+++++|+|++|+||+++ ++
T Consensus        60 ~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~-~~  138 (267)
T cd06610          60 NVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLG-ED  138 (267)
T ss_pred             CEEEEEEEEeeCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEc-CC
Confidence            4566665554 447899999995 5999999763   4589999999999999999999999999999999999999 67


Q ss_pred             CeeEEecccccccccCCCCCC----CCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           78 KTVKIAADSGMAKEIDAPFDA----HTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~~----~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +.+++ .|||++.....+...    .....++..|++||.+......+.++|+||+|++++
T Consensus       139 ~~~~l-~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~  198 (267)
T cd06610         139 GSVKI-ADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAI  198 (267)
T ss_pred             CCEEE-cccchHHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHH
Confidence            88899 799999876544322    234467889999999977644788899999999986

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.92  E-value=8.8e-25  Score=143.38  Aligned_cols=131  Identities=23%  Similarity=0.431  Sum_probs=107.2

Q ss_pred             cchhhhccce-ecceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            3 EMMKSMSLWV-HKRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         3 ~~~~~~~~~~-~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      |+++..+... .+..++++|++. ++|.+++.++..+++..+..++.|++.|+.+||+.+++|+||+|+||+++ .++.+
T Consensus        60 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~-~~~~~  138 (264)
T cd06626          60 NLVKYYGVEVHREKVYIFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLD-HNGVI  138 (264)
T ss_pred             ChhheeeeEecCCEEEEEEecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC-CCCCE
Confidence            5667766653 347889999995 69999998877789999999999999999999999999999999999999 67889


Q ss_pred             EEecccccccccCCCCCCC----CCCcccccccCcccccCCC--CCCchhHHHHhhhhhhC
Q 043346           81 KIAADSGMAKEIDAPFDAH----TTEMVILRYRAPKILFGRT--NCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~~~~----~~~~~~~~~~ape~~~~~~--~~~~~~D~wslg~il~~  135 (135)
                      ++ +|||.+..........    ....+++.|+|||.+.+..  ..+.++|+||+|+++++
T Consensus       139 kl-~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~  198 (264)
T cd06626         139 KL-GDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLE  198 (264)
T ss_pred             EE-cccccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHH
Confidence            99 8999988765432221    1346778999999996653  25678999999999873

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.92  E-value=8e-25  Score=144.57  Aligned_cols=130  Identities=27%  Similarity=0.448  Sum_probs=109.0

Q ss_pred             ccchhhhcccee-cceeEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVH-KRENLVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~-~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|+++..+.+.+ +..+++||++ +++|.+++.+.+.+++..+..++.|++.|+.+||+.+++|+|++|+||+++ ..+.
T Consensus        62 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~-~~~~  140 (280)
T cd05581          62 PGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLD-KDMH  140 (280)
T ss_pred             CCchhHHHHhcCCceEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEEC-CCCC
Confidence            367777777644 4889999999 579999999888899999999999999999999999999999999999998 6678


Q ss_pred             eEEecccccccccCCCC--------------------CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPF--------------------DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~--------------------~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +++ .|||++.......                    .......++..|+|||...+.. .+.++|+||+|++++
T Consensus       141 ~~l-~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~-~~~~~Di~slG~~l~  213 (280)
T cd05581         141 IKI-TDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKP-AGKSSDLWALGCIIY  213 (280)
T ss_pred             EEe-cCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCC-CChhhhHHHHHHHHH
Confidence            888 7999988665432                    1223445678899999987665 678899999999986

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.92  E-value=7.3e-25  Score=146.81  Aligned_cols=131  Identities=27%  Similarity=0.506  Sum_probs=104.3

Q ss_pred             cchhhhcccee---------cceeEEEeccCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCccee
Q 043346            3 EMMKSMSLWVH---------KRENLVFEYVNINLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLL   72 (135)
Q Consensus         3 ~~~~~~~~~~~---------~~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil   72 (135)
                      |+++..+++.+         ...++++||+++++.+.+.. ...+++..+..++.|++.|+.|||+++++|+|++|+||+
T Consensus        68 ~i~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil  147 (311)
T cd07866          68 NVVPLIDMAVERPDKSKRKRGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANIL  147 (311)
T ss_pred             CccchhhheecccccccccCceEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence            55666655422         24689999998888888765 457999999999999999999999999999999999999


Q ss_pred             eecCCCeeEEecccccccccCCCCCC-----------CCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           73 ADIENKTVKIAADSGMAKEIDAPFDA-----------HTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        73 ~~~~~~~~~i~~d~~~~~~~~~~~~~-----------~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ++ .++.+++ +|||++.........           .....+++.|+|||.+.+....+.++|+||+|+++|+
T Consensus       148 ~~-~~~~~~l-~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e  219 (311)
T cd07866         148 ID-NQGILKI-ADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAE  219 (311)
T ss_pred             EC-CCCCEEE-CcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHH
Confidence            99 6788999 799999765432211           1223557789999998766557788999999999873

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.92  E-value=2.5e-25  Score=160.15  Aligned_cols=129  Identities=22%  Similarity=0.348  Sum_probs=111.2

Q ss_pred             cchhhhccce------ecceeEEEeccC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceee
Q 043346            3 EMMKSMSLWV------HKRENLVFEYVN-INLHKFIQQ--YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLA   73 (135)
Q Consensus         3 ~~~~~~~~~~------~~~~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~   73 (135)
                      |+...+.++.      +++.|||||+|+ ||..+..+.  ...+.++.+..+++.++.|+.+||.+.++|||+|-.||++
T Consensus        77 nv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLL  156 (953)
T KOG0587|consen   77 NVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLL  156 (953)
T ss_pred             CcceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEE
Confidence            4555555552      347999999995 699999986  5678999999999999999999999999999999999999


Q ss_pred             ecCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCC----CCchhHHHHhhhhh
Q 043346           74 DIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTN----CFAAIDMWAVLYLL  133 (135)
Q Consensus        74 ~~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~----~~~~~D~wslg~il  133 (135)
                      . .++.+|+ .|||.++..........++.|||.|||||++.....    ++..+|+||||++.
T Consensus       157 T-~e~~VKL-vDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITa  218 (953)
T KOG0587|consen  157 T-ENAEVKL-VDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITA  218 (953)
T ss_pred             e-ccCcEEE-eeeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhcccee
Confidence            9 7899999 699999998888788889999999999999955432    56689999999863

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.92  E-value=8.7e-25  Score=144.85  Aligned_cols=130  Identities=27%  Similarity=0.510  Sum_probs=107.6

Q ss_pred             cchhhhcccee---cceeEEEeccCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            3 EMMKSMSLWVH---KRENLVFEYVNINLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         3 ~~~~~~~~~~~---~~~~lv~e~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      |+++..+.+..   +..++++|+++++|.+++.+. ..+++..+..++.|++.|+++||+.+++|+|++|+||+++ +++
T Consensus        59 ~i~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~-~~~  137 (287)
T cd07840          59 NIVRLKEIVTSKGKGSIYMVFEYMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILIN-NDG  137 (287)
T ss_pred             CeeeheeeEecCCCCcEEEEeccccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEc-CCC
Confidence            56667666643   478999999988999988764 5789999999999999999999999999999999999999 678


Q ss_pred             eeEEecccccccccCCCCC-CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           79 TVKIAADSGMAKEIDAPFD-AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .+++ +|||.+........ ......++..|+|||.+.+....++++|+||||+++|
T Consensus       138 ~~~l-~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~  193 (287)
T cd07840         138 VLKL-ADFGLARPYTKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILA  193 (287)
T ss_pred             CEEE-ccccceeeccCCCcccccccccccccCCceeeEccccCChHHHHHHHHHHHH
Confidence            8999 89999886654421 1233455778999998876555788999999999987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.92  E-value=7.8e-25  Score=144.23  Aligned_cols=129  Identities=24%  Similarity=0.362  Sum_probs=101.3

Q ss_pred             cchhhhccceec-------ceeEEEeccC-CCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCC
Q 043346            3 EMMKSMSLWVHK-------RENLVFEYVN-INLHKFIQQY------HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTT   68 (135)
Q Consensus         3 ~~~~~~~~~~~~-------~~~lv~e~~~-~~L~~~~~~~------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~   68 (135)
                      |+++.++.....       ..++++||+. ++|..++...      ..+++..+..++.|++.|+.|||+++++|+|++|
T Consensus        62 ~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp  141 (273)
T cd05035          62 NVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAA  141 (273)
T ss_pred             CeeeEEeeeccCCccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccch
Confidence            556666554322       3689999995 6999888541      3578999999999999999999999999999999


Q ss_pred             cceeeecCCCeeEEecccccccccCCCCC--CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           69 MNLLADIENKTVKIAADSGMAKEIDAPFD--AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        69 ~nil~~~~~~~~~i~~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +||+++ +.+.+++ +|||.++.......  .......+..|+|||.+.+.. .+.++|+||+|+++|
T Consensus       142 ~Nil~~-~~~~~kl-~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~~Dv~SlG~il~  206 (273)
T cd05035         142 RNCMLR-EDMTVCV-ADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRV-YTSKSDVWAFGVTMW  206 (273)
T ss_pred             heEEEC-CCCeEEE-CCccceeeccccccccccccccCCccccCHhhcccCC-CCcccchHHHHHHHH
Confidence            999999 6788999 89999886643321  122233456799999987665 678899999999987

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.92  E-value=8.7e-25  Score=146.64  Aligned_cols=127  Identities=22%  Similarity=0.346  Sum_probs=104.5

Q ss_pred             ccchhhhccceec-ceeEEEeccCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNINLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|+++..+++.++ ..++|+|++.+++.+.+.. .+.+++..+..++.|++.|+.|||+.+++|+||+|+||+++ +++.
T Consensus        75 ~niv~~~~~~~~~~~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~-~~~~  153 (307)
T cd06607          75 PNTIEYKGCYLREHTAWLVMEYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLT-EPGT  153 (307)
T ss_pred             CCEEEEEEEEEeCCeEEEEHHhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEC-CCCC
Confidence            3667777776544 7889999999988888764 45789999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccC--CCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFG--RTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~--~~~~~~~~D~wslg~il~  134 (135)
                      +++ +|||++......    ....+++.|+|||++.+  ....+.++|+||+|+++|
T Consensus       154 ~kL-~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~  205 (307)
T cd06607         154 VKL-ADFGSASLVSPA----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI  205 (307)
T ss_pred             EEE-eecCcceecCCC----CCccCCccccCceeeeccCCCCCCcccchHHHHHHHH
Confidence            999 799988654322    34567788999998842  233677899999999987

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.92  E-value=1.1e-25  Score=161.24  Aligned_cols=132  Identities=20%  Similarity=0.246  Sum_probs=107.4

Q ss_pred             ccchhhhccceec-ceeEEEeccCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeec-
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNINLHKFIQQYH----PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI-   75 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~~L~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~-   75 (135)
                      .|||+.+....+. ..|++.|.|..+|.+++...+    ..........+.|++.|+++||+.+|+|||+||.||++.. 
T Consensus       563 ~NviRyyc~E~d~qF~YIalELC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~  642 (903)
T KOG1027|consen  563 PNVIRYYCSEQDRQFLYIALELCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVP  642 (903)
T ss_pred             CceEEEEeeccCCceEEEEehHhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEcc
Confidence            3778888777555 788999999999999998731    1111345677899999999999999999999999999985 


Q ss_pred             ---CCCeeEEecccccccccCCCCC---CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           76 ---ENKTVKIAADSGMAKEIDAPFD---AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        76 ---~~~~~~i~~d~~~~~~~~~~~~---~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                         ....++| +|||++++......   ......||-+|+|||++.+.. ...++|++|+||++||
T Consensus       643 ~~~~~~ra~i-SDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~-~~~avDiFslGCvfyY  706 (903)
T KOG1027|consen  643 SADGTLRAKI-SDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDR-KTQAVDIFSLGCVFYY  706 (903)
T ss_pred             CCCcceeEEe-cccccccccCCCcchhhcccCCCCcccccCHHHHhccc-cCcccchhhcCceEEE
Confidence               2256788 89999999876543   345678899999999998776 4668999999999997

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.92  E-value=8e-25  Score=148.95  Aligned_cols=127  Identities=26%  Similarity=0.474  Sum_probs=105.0

Q ss_pred             cchhhhccceec-------ceeEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeec
Q 043346            3 EMMKSMSLWVHK-------RENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI   75 (135)
Q Consensus         3 ~~~~~~~~~~~~-------~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~   75 (135)
                      |++++.+.+...       ..++++|+++++|.+++.. .++++..+..++.|++.|+.++|+.|++|+||+|+||+++ 
T Consensus        75 ~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~-~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~-  152 (343)
T cd07851          75 NVIGLLDVFTPASSLEDFQDVYLVTHLMGADLNNIVKC-QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN-  152 (343)
T ss_pred             CHHHHHHHhhccccccccccEEEEEecCCCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC-
Confidence            556666555332       3789999998899999876 5799999999999999999999999999999999999999 


Q ss_pred             CCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           76 ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        76 ~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      .++.+++ +|||.+......   .....++..|+|||.+.+....+.++|+||+|+++|+
T Consensus       153 ~~~~~kL-~dfg~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~e  208 (343)
T cd07851         153 EDCELKI-LDFGLARHTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE  208 (343)
T ss_pred             CCCCEEE-cccccccccccc---ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHH
Confidence            6788999 799998765433   2334567889999998765456789999999999873

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.92  E-value=1e-24  Score=142.28  Aligned_cols=130  Identities=23%  Similarity=0.406  Sum_probs=108.6

Q ss_pred             ccchhhhcccee-cceeEEEeccC-CCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeec
Q 043346            2 QEMMKSMSLWVH-KRENLVFEYVN-INLHKFIQQY----HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI   75 (135)
Q Consensus         2 ~~~~~~~~~~~~-~~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~   75 (135)
                      .|+++..+.+.+ ...++++|+++ ++|.+++.+.    ..+++..+..++.+++.|+.+||+++++|+|++|+||+++ 
T Consensus        59 ~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~-  137 (258)
T cd08215          59 PNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLT-  137 (258)
T ss_pred             CChhheEEEEecCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEc-
Confidence            356666666544 47889999996 5999999763    6789999999999999999999999999999999999999 


Q ss_pred             CCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           76 ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        76 ~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ..+.+++ .|||.+..............+++.|+|||...+.. .+.++|+||+|++++
T Consensus       138 ~~~~~~l-~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~-~~~~~Dv~slG~~~~  194 (258)
T cd08215         138 SNGLVKL-GDFGISKVLSSTVDLAKTVVGTPYYLSPELCQNKP-YNYKSDIWSLGCVLY  194 (258)
T ss_pred             CCCcEEE-CCccceeecccCcceecceeeeecccChhHhccCC-CCccccHHHHHHHHH
Confidence            6788899 79999987655543444557888999999987766 678899999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.92  E-value=1.4e-24  Score=141.77  Aligned_cols=129  Identities=27%  Similarity=0.417  Sum_probs=106.9

Q ss_pred             ccchhhhcccee-cceeEEEeccC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeec
Q 043346            2 QEMMKSMSLWVH-KRENLVFEYVN-INLHKFIQQ----YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI   75 (135)
Q Consensus         2 ~~~~~~~~~~~~-~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~   75 (135)
                      .|++++.+.+.+ ...++++|+++ ++|.+++.+    ...+++..+..++.|++.|+.+||+.|++|+|++|+||+++ 
T Consensus        59 ~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~-  137 (256)
T cd08530          59 PNIISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLV-  137 (256)
T ss_pred             CCchhhhhhhccCCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEe-
Confidence            367777767644 48899999995 599998866    35688999999999999999999999999999999999999 


Q ss_pred             CCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           76 ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        76 ~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ..+.+++ .|||.+......  ......+++.|++||...+.. .+.++|+||+|+++++
T Consensus       138 ~~~~~kl-~d~g~~~~~~~~--~~~~~~~~~~~~~Pe~~~~~~-~~~~~D~~slG~~~~~  193 (256)
T cd08530         138 ANDLVKI-GDLGISKVLKKN--MAKTQIGTPHYMAPEVWKGRP-YSYKSDIWSLGCLLYE  193 (256)
T ss_pred             cCCcEEE-eeccchhhhccC--CcccccCCccccCHHHHCCCC-CCchhhHHHHHHHHHH
Confidence            5778899 799998766544  223345778899999997765 6778999999999873

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.92  E-value=1.5e-24  Score=143.64  Aligned_cols=130  Identities=25%  Similarity=0.413  Sum_probs=104.3

Q ss_pred             ccchhhhcccee--cceeEEEeccC-CCHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcc
Q 043346            2 QEMMKSMSLWVH--KRENLVFEYVN-INLHKFIQQY--------HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMN   70 (135)
Q Consensus         2 ~~~~~~~~~~~~--~~~~lv~e~~~-~~L~~~~~~~--------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~n   70 (135)
                      .|+++.+++..+  ...++++|++. ++|.+++...        ..+++..+..++.|++.|+.|||+++++|+||+|+|
T Consensus        68 ~ni~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~n  147 (280)
T cd05043          68 QNILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARN  147 (280)
T ss_pred             CCCCeEEEEEecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhh
Confidence            367777776544  47889999985 6999998753        357899999999999999999999999999999999


Q ss_pred             eeeecCCCeeEEecccccccccCCCCC--CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           71 LLADIENKTVKIAADSGMAKEIDAPFD--AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        71 il~~~~~~~~~i~~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ++++ +.+.+++ +|||+++.+.....  ......++..|+|||.+.+.. .+.++|+||+|+++|
T Consensus       148 il~~-~~~~~kl-~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~-~~~~~Di~slG~~l~  210 (280)
T cd05043         148 CVID-EELQVKI-TDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKE-YSSASDVWSFGVLLW  210 (280)
T ss_pred             EEEc-CCCcEEE-CCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCC-CCchhhHHHhHHHHH
Confidence            9998 6688999 79999876533211  112234456799999997765 678899999999986

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.92  E-value=1e-24  Score=141.72  Aligned_cols=129  Identities=20%  Similarity=0.355  Sum_probs=107.8

Q ss_pred             cchhhhcccee-cceeEEEeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            3 EMMKSMSLWVH-KRENLVFEYVN-INLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         3 ~~~~~~~~~~~-~~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      ++++..+.+.. ...++++|+++ ++|.+++... ..+++..+..++.|++.++.+||+.+++|+|++|+||+++ .++.
T Consensus        58 ~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~-~~~~  136 (253)
T cd05122          58 NIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLT-SDGE  136 (253)
T ss_pred             CEeEEEEEEecCCeEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEc-cCCe
Confidence            45666666644 47889999996 6999999875 5889999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ .|||.+........ .....++..|++||...+.. .+.++|+||+|+++|+
T Consensus       137 ~~l-~d~~~~~~~~~~~~-~~~~~~~~~~~~PE~~~~~~-~~~~~Dv~slG~il~~  189 (253)
T cd05122         137 VKL-IDFGLSAQLSDTKA-RNTMVGTPYWMAPEVINGKP-YDYKADIWSLGITAIE  189 (253)
T ss_pred             EEE-eecccccccccccc-ccceecCCcccCHHHHcCCC-CCccccHHHHHHHHHH
Confidence            999 79999877654422 34456788899999997765 6788999999999873

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.92  E-value=1.1e-24  Score=148.31  Aligned_cols=127  Identities=26%  Similarity=0.483  Sum_probs=103.0

Q ss_pred             cchhhhcccee-------cceeEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeec
Q 043346            3 EMMKSMSLWVH-------KRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI   75 (135)
Q Consensus         3 ~~~~~~~~~~~-------~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~   75 (135)
                      |+++..+.+..       ...++++++++++|.+.+.. ..+++..+..++.|++.|+.|||+++++|+||+|+||+++ 
T Consensus        77 ~iv~~~~~~~~~~~~~~~~~~~lv~~~~~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~-  154 (345)
T cd07877          77 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-  154 (345)
T ss_pred             cccceeeeeeecccccccccEEEEehhcccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEc-
Confidence            56666665532       24678888888899888765 4689999999999999999999999999999999999999 


Q ss_pred             CCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           76 ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        76 ~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      .++.+++ +|||++......   .....++..|+|||.+.+....+.++|+||+|+++|+
T Consensus       155 ~~~~~kl-~dfg~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~e  210 (345)
T cd07877         155 EDCELKI-LDFGLARHTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE  210 (345)
T ss_pred             CCCCEEE-eccccccccccc---ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHH
Confidence            6678999 799998754322   2334678889999998775447788999999999873

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.92  E-value=1.4e-24  Score=142.99  Aligned_cols=129  Identities=22%  Similarity=0.388  Sum_probs=106.1

Q ss_pred             ccchhhhcccee-cceeEEEeccC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhh-CCcccCCCCCcceeee
Q 043346            2 QEMMKSMSLWVH-KRENLVFEYVN-INLHKFIQQ----YHPMDSHLIKKFLYCILSGISYCHA-RKIIHRDLTTMNLLAD   74 (135)
Q Consensus         2 ~~~~~~~~~~~~-~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~~~nil~~   74 (135)
                      +|+++..+.+.+ +..+++|||+. ++|.+.+..    ...+++..+..++.|++.++.+||+ .+++|+|++|+||+++
T Consensus        69 ~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~  148 (269)
T cd08528          69 PNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLG  148 (269)
T ss_pred             CCeeeEEeeEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEEC
Confidence            366777766644 48899999995 599887743    3468999999999999999999996 7899999999999999


Q ss_pred             cCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           75 IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        75 ~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                       ..+.+++ +|||.+....... ......++..|++||...+.. .+.++|+||+|+++|
T Consensus       149 -~~~~~~l-~dfg~~~~~~~~~-~~~~~~~~~~~~~Pe~~~~~~-~~~~~Dv~slG~ll~  204 (269)
T cd08528         149 -EDDKVTI-TDFGLAKQKQPES-KLTSVVGTILYSCPEIVKNEP-YGEKADVWAFGCILY  204 (269)
T ss_pred             -CCCcEEE-ecccceeeccccc-ccccccCcccCcChhhhcCCC-CchHHHHHHHHHHHH
Confidence             6678899 7999998654442 334556788899999998765 788999999999987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.92  E-value=2.5e-24  Score=145.06  Aligned_cols=127  Identities=21%  Similarity=0.339  Sum_probs=103.7

Q ss_pred             ccchhhhccceec-ceeEEEeccCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNINLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|+++..+++.++ ..+++|||+.+++.+.+.. ..++++..+..++.|++.|+.+||+++++|+||+|+||+++ ..+.
T Consensus        85 ~~iv~~~~~~~~~~~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~-~~~~  163 (317)
T cd06635          85 PNSIEYKGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLT-EPGQ  163 (317)
T ss_pred             CCEEEEEEEEeeCCeEEEEEeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEEC-CCCC
Confidence            3667777766444 7889999998888888764 46789999999999999999999999999999999999998 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccC--CCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFG--RTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~--~~~~~~~~D~wslg~il~  134 (135)
                      +++ +|||++.....    .....+++.|+|||.+.+  ....+.++|+||+|+++|
T Consensus       164 ~kl-~dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~  215 (317)
T cd06635         164 VKL-ADFGSASIASP----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI  215 (317)
T ss_pred             EEE-ecCCCccccCC----cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHH
Confidence            999 79998765432    234467788999999842  233678899999999986

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.92  E-value=2.4e-24  Score=141.24  Aligned_cols=129  Identities=22%  Similarity=0.377  Sum_probs=106.4

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeec
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQ----YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI   75 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~   75 (135)
                      .|+++.++.+.+. ..++++||+. ++|.+.+.+    ...+++..+..++.|++.|+.+||+.+++|+|++|+|++++ 
T Consensus        62 ~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~-  140 (260)
T cd08222          62 PAIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLK-  140 (260)
T ss_pred             CcHHHHHHHHhcCCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEee-
Confidence            4677887777544 7889999995 599888764    35689999999999999999999999999999999999998 


Q ss_pred             CCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           76 ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        76 ~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      + +.+++ +|||.+..............+++.|+|||...+.. .+.++|+||+|+++|
T Consensus       141 ~-~~~~l-~d~g~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~~Dv~slG~~~~  196 (260)
T cd08222         141 N-NLLKI-GDFGVSRLLMGSCDLATTFTGTPYYMSPEALKHQG-YDSKSDIWSLGCILY  196 (260)
T ss_pred             c-CCEee-cccCceeecCCCcccccCCCCCcCccCHHHHccCC-CCchhhHHHHHHHHH
Confidence            3 45888 89999877655444445566788999999986655 677899999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.92  E-value=1.9e-24  Score=143.11  Aligned_cols=131  Identities=24%  Similarity=0.368  Sum_probs=104.8

Q ss_pred             ccchhhhcccee---cceeEEEeccC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecC
Q 043346            2 QEMMKSMSLWVH---KRENLVFEYVN-INLHKFIQQYH-PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE   76 (135)
Q Consensus         2 ~~~~~~~~~~~~---~~~~lv~e~~~-~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~   76 (135)
                      .|+++..+++..   ...+++||++. ++|.+++.... .++...+..++.|++.|+.+||+++++|+|++|+||+++ .
T Consensus        66 ~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~-~  144 (284)
T cd05038          66 ENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVE-S  144 (284)
T ss_pred             CChheEEeeeecCCCCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEc-C
Confidence            356666666543   36889999995 69999998744 689999999999999999999999999999999999999 6


Q ss_pred             CCeeEEecccccccccCCCCC---CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           77 NKTVKIAADSGMAKEIDAPFD---AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        77 ~~~~~i~~d~~~~~~~~~~~~---~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      .+.+++ +|||.+........   ......++..|++||...+.. .+.++|+||||+++++
T Consensus       145 ~~~~~l-~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~-~~~~~Di~slG~~l~e  204 (284)
T cd05038         145 EDLVKI-SDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSK-FSSASDVWSFGVTLYE  204 (284)
T ss_pred             CCCEEE-cccccccccccCCcceeccCCCCCcccccCcHHHccCC-CCcccchHHHhhhhhe
Confidence            688899 79999987653321   112233455699999987665 6788999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.92  E-value=2.7e-24  Score=143.61  Aligned_cols=131  Identities=21%  Similarity=0.337  Sum_probs=105.6

Q ss_pred             ccchhhhccceec-ceeEEEeccCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhh-CCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNINLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHA-RKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~~~nil~~~~~~   78 (135)
                      .|+++.++.+... ..+++||++++++.+.... .+.+++..+..++.|++.|+.|||+ .+++|+||+|+||+++ +++
T Consensus        74 ~~i~~~~~~~~~~~~~~~v~e~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~-~~~  152 (296)
T cd06618          74 PYIVKCYGYFITDSDVFICMELMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLD-ASG  152 (296)
T ss_pred             CchHhhheeeecCCeEEEEeeccCcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEc-CCC
Confidence            3677787777444 7899999998888887765 4578999999999999999999997 5999999999999998 678


Q ss_pred             eeEEecccccccccCCCCCCCCCCcccccccCcccccCCC---CCCchhHHHHhhhhhhC
Q 043346           79 TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRT---NCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~---~~~~~~D~wslg~il~~  135 (135)
                      .+++ +|||.+....... ......++..|+|||.+.+..   ..+.++|+||+|+++|.
T Consensus       153 ~~kL-~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~e  210 (296)
T cd06618         153 NVKL-CDFGISGRLVDSK-AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVE  210 (296)
T ss_pred             CEEE-CccccchhccCCC-cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHH
Confidence            8999 7999987654332 222335677899999986542   35678999999999873

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.92  E-value=1.9e-24  Score=146.41  Aligned_cols=127  Identities=28%  Similarity=0.556  Sum_probs=104.7

Q ss_pred             cchhhhcccee--cceeEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            3 EMMKSMSLWVH--KRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         3 ~~~~~~~~~~~--~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      |+++..+.+..  ...++++|+++++|.+++.. .++++..+..++.|++.|+++||+.+++|+|++|+|++++ ..+.+
T Consensus        70 niv~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~-~~~~~  147 (328)
T cd07856          70 NIISLSDIFISPLEDIYFVTELLGTDLHRLLTS-RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILIN-ENCDL  147 (328)
T ss_pred             CeeeEeeeEecCCCcEEEEeehhccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeEC-CCCCE
Confidence            67777776643  36889999998899888865 5688889999999999999999999999999999999999 67889


Q ss_pred             EEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           81 KIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ++ +|||.+......   .....+++.|+|||.+.+....+.++|+||+|+++|+
T Consensus       148 ~l-~dfg~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e  198 (328)
T cd07856         148 KI-CDFGLARIQDPQ---MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAE  198 (328)
T ss_pred             Ee-CccccccccCCC---cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHH
Confidence            99 799988754322   2334567889999998664447889999999999874

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.92  E-value=1.6e-24  Score=147.55  Aligned_cols=127  Identities=28%  Similarity=0.512  Sum_probs=103.6

Q ss_pred             cchhhhccceec-------ceeEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeec
Q 043346            3 EMMKSMSLWVHK-------RENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI   75 (135)
Q Consensus         3 ~~~~~~~~~~~~-------~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~   75 (135)
                      |+++..+.+...       ..++++|+++++|.+++.. ..+++..+..++.|++.|+.+||+.+++|+||+|+||+++ 
T Consensus        75 ~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~-~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~-  152 (343)
T cd07880          75 NVIGLLDVFTPDLSLDRFHDFYLVMPFMGTDLGKLMKH-EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVN-  152 (343)
T ss_pred             CccceeeeecCCccccccceEEEEEecCCCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc-
Confidence            566666655322       3589999998899888865 5789999999999999999999999999999999999999 


Q ss_pred             CCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           76 ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        76 ~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ..+.+++ +|||++......   .....+++.|+|||.+.+....+.++|+||+|+++|+
T Consensus       153 ~~~~~kl-~dfg~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~  208 (343)
T cd07880         153 EDCELKI-LDFGLARQTDSE---MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAE  208 (343)
T ss_pred             CCCCEEE-eecccccccccC---ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHH
Confidence            6778899 799998765432   2334567889999999765447788999999999873

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.92  E-value=1.8e-24  Score=143.83  Aligned_cols=130  Identities=22%  Similarity=0.315  Sum_probs=105.4

Q ss_pred             cchhhhcccee-cceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            3 EMMKSMSLWVH-KRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         3 ~~~~~~~~~~~-~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      ++++..+.+.. +..++||||+. ++|.+++.+...+++..+..++.|++.++.+||+.+++|+|++|+||+++ ..+.+
T Consensus        66 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~-~~~~~  144 (288)
T cd05583          66 FLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLD-SEGHV  144 (288)
T ss_pred             chhhhheeeecCCEEEEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC-CCCCE
Confidence            56666655544 47889999995 69999998877899999999999999999999999999999999999999 56788


Q ss_pred             EEecccccccccCCCCC-CCCCCcccccccCcccccCCC-CCCchhHHHHhhhhhh
Q 043346           81 KIAADSGMAKEIDAPFD-AHTTEMVILRYRAPKILFGRT-NCFAAIDMWAVLYLLR  134 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~-~~~~~~D~wslg~il~  134 (135)
                      ++ +|||++........ ......++..|++||...+.. ..+.++|+||+|+++|
T Consensus       145 ~l-~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~  199 (288)
T cd05583         145 VL-TDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTF  199 (288)
T ss_pred             EE-EECccccccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHH
Confidence            98 79999876543322 223345788999999986543 2567899999999986

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.92  E-value=3e-24  Score=144.48  Aligned_cols=127  Identities=21%  Similarity=0.338  Sum_probs=103.9

Q ss_pred             cchhhhccceec-ceeEEEeccCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            3 EMMKSMSLWVHK-RENLVFEYVNINLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         3 ~~~~~~~~~~~~-~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      |+++..+.+.+. ..|++||++.+++.+.+.. ..++++..+..++.|++.++.|||++|++|+|++|+||+++ ..+.+
T Consensus        82 ~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~-~~~~~  160 (313)
T cd06633          82 NTIEYKGCYLKEHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLT-EPGQV  160 (313)
T ss_pred             CCccEEEEEEeCCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEEC-CCCCE
Confidence            567777766544 7889999998888888865 45789999999999999999999999999999999999998 66789


Q ss_pred             EEecccccccccCCCCCCCCCCcccccccCcccccC--CCCCCchhHHHHhhhhhhC
Q 043346           81 KIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFG--RTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~--~~~~~~~~D~wslg~il~~  135 (135)
                      ++ +|||++....    ......++..|+|||.+.+  ....+.++|+||+|+++|+
T Consensus       161 kL-~dfg~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~e  212 (313)
T cd06633         161 KL-ADFGSASKSS----PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE  212 (313)
T ss_pred             EE-eecCCCcccC----CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHH
Confidence            99 7999876432    2234567888999999842  2336778999999999873

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.92  E-value=1.4e-24  Score=146.83  Aligned_cols=132  Identities=16%  Similarity=0.250  Sum_probs=102.0

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQY--HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN   77 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~   77 (135)
                      .|+++.++.+..+ ..++++|++. +++.+++.+.  ..+++..+..++.|++.|++|||+++++||||||+||+++ ..
T Consensus        59 ~niv~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~-~~  137 (328)
T cd08226          59 PNIMTSWTVFTTGSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILIS-GD  137 (328)
T ss_pred             CCcceEeeeEecCCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEe-CC
Confidence            3677887877544 7889999995 5999988763  3588999999999999999999999999999999999999 66


Q ss_pred             CeeEEecccccccccCCCCCC-------CCCCcccccccCcccccCC-CCCCchhHHHHhhhhhhC
Q 043346           78 KTVKIAADSGMAKEIDAPFDA-------HTTEMVILRYRAPKILFGR-TNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~~-------~~~~~~~~~~~ape~~~~~-~~~~~~~D~wslg~il~~  135 (135)
                      +.+++ .+|+...........       .....++..|+|||.+.+. ..++.++|+||+||++|+
T Consensus       138 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~e  202 (328)
T cd08226         138 GLVSL-SGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACE  202 (328)
T ss_pred             CcEEE-echHHHhhhhccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHH
Confidence            78888 688755433221111       1112345569999999764 236788999999999873

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.92  E-value=7.1e-26  Score=145.21  Aligned_cols=130  Identities=21%  Similarity=0.311  Sum_probs=107.7

Q ss_pred             ccchhhhccc-eecceeEEEeccCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHhh-CCcccCCCCCcceeee
Q 043346            2 QEMMKSMSLW-VHKRENLVFEYVNINLHKFIQQ-----YHPMDSHLIKKFLYCILSGISYCHA-RKIIHRDLTTMNLLAD   74 (135)
Q Consensus         2 ~~~~~~~~~~-~~~~~~lv~e~~~~~L~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~~~nil~~   74 (135)
                      .||++.++.. .++..|++||.++.|+..+.+.     +..+++.-+.++.--.+.||.||-+ ..++|||+||+||+++
T Consensus       123 p~IVkfyGa~F~EGdcWiCMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILld  202 (361)
T KOG1006|consen  123 PNIVKFYGALFSEGDCWICMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLD  202 (361)
T ss_pred             cHHHHHhhhhhcCCceeeeHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEe
Confidence            4788998877 5559999999999888777653     4578999999988888999999987 4899999999999999


Q ss_pred             cCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCC-CCCchhHHHHhhhhhh
Q 043346           75 IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRT-NCFAAIDMWAVLYLLR  134 (135)
Q Consensus        75 ~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~-~~~~~~D~wslg~il~  134 (135)
                       ..|.+|+ +|||.+..+... -..+...|...|||||-+.... .+.-++|+||||++||
T Consensus       203 -r~G~vKL-CDFGIcGqLv~S-iAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~  260 (361)
T KOG1006|consen  203 -RHGDVKL-CDFGICGQLVDS-IAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLY  260 (361)
T ss_pred             -cCCCEee-ecccchHhHHHH-HHhhhccCCccccChhccCCccCCcchhhhhhhhcceEe
Confidence             7799999 999998766544 3445567888999999994433 3778899999999987

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.92  E-value=2.8e-24  Score=144.31  Aligned_cols=126  Identities=21%  Similarity=0.329  Sum_probs=102.5

Q ss_pred             cchhhhccceec-ceeEEEeccCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            3 EMMKSMSLWVHK-RENLVFEYVNINLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         3 ~~~~~~~~~~~~-~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      |+++..+++... ..++|+|++.+++.+.+.. ...+++..+..++.|++.++.+||+++++|+||+|+||+++ ..+.+
T Consensus        76 ~i~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~-~~~~~  154 (308)
T cd06634          76 NTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS-EPGLV  154 (308)
T ss_pred             CcccEEEEEEcCCeeEEEEEccCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEEC-CCCcE
Confidence            566666666444 7889999998888887754 45689999999999999999999999999999999999998 66889


Q ss_pred             EEecccccccccCCCCCCCCCCcccccccCcccccC--CCCCCchhHHHHhhhhhh
Q 043346           81 KIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFG--RTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~--~~~~~~~~D~wslg~il~  134 (135)
                      ++ +|||.+......    ....+++.|+|||.+.+  ....+.++|+||+|+++|
T Consensus       155 kl-~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~  205 (308)
T cd06634         155 KL-GDFGSASIMAPA----NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI  205 (308)
T ss_pred             EE-CCcccceeecCc----ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHH
Confidence            99 899988754322    33457788999999853  223567899999999987

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.91  E-value=1.8e-24  Score=155.01  Aligned_cols=121  Identities=21%  Similarity=0.289  Sum_probs=92.3

Q ss_pred             ecceeEEEeccC-CCHHHHHHhcCC--------------------CCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcce
Q 043346           13 HKRENLVFEYVN-INLHKFIQQYHP--------------------MDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNL   71 (135)
Q Consensus        13 ~~~~~lv~e~~~-~~L~~~~~~~~~--------------------~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~ni   71 (135)
                      +...++++||++ ++|.+++.....                    .....+..++.|++.||.|||+++|+||||||+||
T Consensus       207 ~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NI  286 (566)
T PLN03225        207 EDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNI  286 (566)
T ss_pred             CCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHE
Confidence            347899999995 699998875321                    11344668999999999999999999999999999


Q ss_pred             eeecCCCeeEEecccccccccCCCC-CCCCCCcccccccCcccccCCCC---------------------CCchhHHHHh
Q 043346           72 LADIENKTVKIAADSGMAKEIDAPF-DAHTTEMVILRYRAPKILFGRTN---------------------CFAAIDMWAV  129 (135)
Q Consensus        72 l~~~~~~~~~i~~d~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~---------------------~~~~~D~wsl  129 (135)
                      +++.+.+.+++ +|||+++...... .......+++.|+|||.+.....                     .+.++|+||+
T Consensus       287 Ll~~~~~~~KL-~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSl  365 (566)
T PLN03225        287 IFSEGSGSFKI-IDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSA  365 (566)
T ss_pred             EEeCCCCcEEE-EeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHH
Confidence            99855678999 8999998654322 22345678899999997633221                     2234599999


Q ss_pred             hhhhh
Q 043346          130 LYLLR  134 (135)
Q Consensus       130 g~il~  134 (135)
                      ||++|
T Consensus       366 GviL~  370 (566)
T PLN03225        366 GLIFL  370 (566)
T ss_pred             HHHHH
Confidence            99987

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.91  E-value=6.8e-24  Score=141.10  Aligned_cols=129  Identities=25%  Similarity=0.385  Sum_probs=104.4

Q ss_pred             ccchhhhcccee---cceeEEEeccC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceee
Q 043346            2 QEMMKSMSLWVH---KRENLVFEYVN-INLHKFIQQ----YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLA   73 (135)
Q Consensus         2 ~~~~~~~~~~~~---~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~   73 (135)
                      .|++++++.+..   +..+++||+++ ++|.+++..    ...+++..+..++.|++.++.|+|+.+++|+|++|+||++
T Consensus        59 ~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~  138 (287)
T cd06621          59 PYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILL  138 (287)
T ss_pred             CCeeeeeeEEEccCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE
Confidence            467777776632   36899999995 599888753    3468899999999999999999999999999999999999


Q ss_pred             ecCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           74 DIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        74 ~~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      + ..+.+++ +|||++.......  .....++..|+|||.+.+.. .+.++|+||+|+++|.
T Consensus       139 ~-~~~~~~l-~dfg~~~~~~~~~--~~~~~~~~~y~~pE~~~~~~-~~~~~Dv~slG~il~~  195 (287)
T cd06621         139 T-RKGQVKL-CDFGVSGELVNSL--AGTFTGTSFYMAPERIQGKP-YSITSDVWSLGLTLLE  195 (287)
T ss_pred             e-cCCeEEE-eeccccccccccc--cccccCCccccCHHHhcCCC-CCchhhHHHHHHHHHH
Confidence            9 6678899 7999987654332  22345677899999987665 6788999999999873

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.91  E-value=2.6e-25  Score=158.90  Aligned_cols=130  Identities=23%  Similarity=0.396  Sum_probs=111.0

Q ss_pred             ccchhhhccceeccee-EEEecc-CCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHKREN-LVFEYV-NINLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~~~~-lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      .|||++.+..++.++. ++.||| ||+|..|++++ +.++.-+...+++.|+.||+||.+.+++||||..+|||++ .+-
T Consensus       690 PNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVN-snL  768 (996)
T KOG0196|consen  690 PNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVN-SNL  768 (996)
T ss_pred             CcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeec-cce
Confidence            4899999999888655 788999 79999999985 5788899999999999999999999999999999999999 778


Q ss_pred             eeEEecccccccccCCCCCCCCCCcc---cccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           79 TVKIAADSGMAKEIDAPFDAHTTEMV---ILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~~~~~~~---~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .+|+ +|||+++.+.++.....+..|   ...|.|||.+.-+. +++++|+||+|+++.
T Consensus       769 vCKV-sDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RK-FTsASDVWSyGIVmW  825 (996)
T KOG0196|consen  769 VCKV-SDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRK-FTSASDVWSYGIVMW  825 (996)
T ss_pred             EEEe-ccccceeecccCCCccccccCCccceeecChhHhhhcc-cCchhhccccceEEE
Confidence            8999 899999988655433322222   45799999998777 899999999999874

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.91  E-value=3.6e-24  Score=145.68  Aligned_cols=127  Identities=29%  Similarity=0.551  Sum_probs=102.3

Q ss_pred             ccchhhhccceec-------ceeEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeee
Q 043346            2 QEMMKSMSLWVHK-------RENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD   74 (135)
Q Consensus         2 ~~~~~~~~~~~~~-------~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~   74 (135)
                      .|++++.+++...       ..++++|++..+|.+...  ..++++.+..++.|++.|+++||+.+++|+||+|+||+++
T Consensus        74 ~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~  151 (342)
T cd07879          74 ENVIGLLDVFTSAVSGDEFQDFYLVMPYMQTDLQKIMG--HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVN  151 (342)
T ss_pred             CCccchhheecccccCCCCceEEEEecccccCHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC
Confidence            3566776665432       458999999878877653  4689999999999999999999999999999999999999


Q ss_pred             cCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           75 IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        75 ~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                       ..+.+++ +|||++.....   ......+++.|+|||.+.+....+.++|+||+|+++|+
T Consensus       152 -~~~~~kL-~dfg~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~e  207 (342)
T cd07879         152 -EDCELKI-LDFGLARHADA---EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAE  207 (342)
T ss_pred             -CCCCEEE-eeCCCCcCCCC---CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHH
Confidence             6788999 79999875432   22344667889999998765447788999999999874

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.91  E-value=3.6e-24  Score=145.02  Aligned_cols=117  Identities=28%  Similarity=0.380  Sum_probs=100.2

Q ss_pred             ceeEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhh--------CCcccCCCCCcceeeecCCCeeEEecc
Q 043346           15 RENLVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHA--------RKIIHRDLTTMNLLADIENKTVKIAAD   85 (135)
Q Consensus        15 ~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~--------~~i~h~dl~~~nil~~~~~~~~~i~~d   85 (135)
                      +.|||++|- .|||++|+.+ ..++.+...+++..+++||.|||.        -.|.|||||++||++. +++.+.| +|
T Consensus       283 QLwLvTdYHe~GSL~DyL~r-~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVK-kn~~C~I-AD  359 (513)
T KOG2052|consen  283 QLWLVTDYHEHGSLYDYLNR-NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK-KNGTCCI-AD  359 (513)
T ss_pred             EEEEeeecccCCcHHHHHhh-ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEc-cCCcEEE-ee
Confidence            689999999 5899999999 789999999999999999999995        3699999999999999 7899999 89


Q ss_pred             cccccccCCCC----CCCCCCcccccccCcccccCCCC-----CCchhHHHHhhhhhh
Q 043346           86 SGMAKEIDAPF----DAHTTEMVILRYRAPKILFGRTN-----CFAAIDMWAVLYLLR  134 (135)
Q Consensus        86 ~~~~~~~~~~~----~~~~~~~~~~~~~ape~~~~~~~-----~~~~~D~wslg~il~  134 (135)
                      +|++.......    -.....+||..|||||++.....     .-..+|+||||.++.
T Consensus       360 LGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlW  417 (513)
T KOG2052|consen  360 LGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLW  417 (513)
T ss_pred             ceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHH
Confidence            99998775442    23567899999999999966542     224689999999874

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.91  E-value=8.5e-24  Score=137.90  Aligned_cols=130  Identities=25%  Similarity=0.415  Sum_probs=109.1

Q ss_pred             ccchhhhcccee---cceeEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC
Q 043346            2 QEMMKSMSLWVH---KRENLVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN   77 (135)
Q Consensus         2 ~~~~~~~~~~~~---~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~   77 (135)
                      .|+++..+...+   ...++++|++ +++|.+++.+...+++..+..++.|++.++.+||+.+++|+|++|+||+++ .+
T Consensus        59 ~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~-~~  137 (260)
T cd06606          59 PNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVD-SD  137 (260)
T ss_pred             CCEeeEEEEEecCCCCeEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEc-CC
Confidence            356666666543   4688999999 569999998877899999999999999999999999999999999999999 57


Q ss_pred             CeeEEecccccccccCCCCC--CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           78 KTVKIAADSGMAKEIDAPFD--AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +.+++ +|||.+........  ......++..|++||...+.. .+.++|+||+|+++|
T Consensus       138 ~~~~l-~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~-~~~~~Dv~slG~il~  194 (260)
T cd06606         138 GVVKL-ADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEE-YGRAADIWSLGCTVI  194 (260)
T ss_pred             CCEEE-cccccEEecccccccccccCCCCCccccCHhhhcCCC-CCchhhHHHHHHHHH
Confidence            88899 79999887755532  234456788999999997766 678899999999987

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.91  E-value=4.8e-25  Score=153.72  Aligned_cols=130  Identities=25%  Similarity=0.349  Sum_probs=110.1

Q ss_pred             ccchhhhccceec-ceeEEEecc-CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYV-NINLHKFIQQYH--PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN   77 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~   77 (135)
                      .||+.+.+.+..+ .+++++||+ +|+|.+|+.++.  .........++.||+.|++||.+.+++|||+.++|++++ .+
T Consensus       595 PNIveLvGVC~~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~-~e  673 (807)
T KOG1094|consen  595 PNIVELLGVCVQDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVD-GE  673 (807)
T ss_pred             CCeeEEEeeeecCCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeec-Cc
Confidence            4888999998555 677999999 689999999863  334556777999999999999999999999999999999 88


Q ss_pred             CeeEEecccccccccCCCC--CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           78 KTVKIAADSGMAKEIDAPF--DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .++|+ +|||+++.+.+..  ....-++-...|||+|.+..+. .+.++|+|++|++++
T Consensus       674 ~~iKi-adfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgk-FttaSDvWafgvTlw  730 (807)
T KOG1094|consen  674 FTIKI-ADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGK-FTTASDVWAFGVTLW  730 (807)
T ss_pred             ccEEe-cCcccccccccCCceeeecceeeeeeehhHHHHHhcc-ccchhhhhhhHHHHH
Confidence            99999 9999999775442  3334456678899999998776 889999999999986

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.91  E-value=1.8e-24  Score=138.13  Aligned_cols=118  Identities=28%  Similarity=0.526  Sum_probs=103.5

Q ss_pred             ceeEEEeccCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEecccccccccC
Q 043346           15 RENLVFEYVNINLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEID   93 (135)
Q Consensus        15 ~~~lv~e~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~~~   93 (135)
                      ..|+|+++|+-+|.-.+... .+++..++.+++.+++.|+.|+|...++|||+|+.|++++ ..+.+++ +|||+++.+.
T Consensus        98 t~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt-~dgilkl-ADFGlar~fs  175 (376)
T KOG0669|consen   98 TFYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLIT-KDGILKL-ADFGLARAFS  175 (376)
T ss_pred             eeeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEc-CCceEEe-ecccccccee
Confidence            48999999999999998764 6899999999999999999999999999999999999999 7789999 8999997664


Q ss_pred             CCCC----CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           94 APFD----AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        94 ~~~~----~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .+..    .-+..+.|..|.+||.+.|...++++.|+|+.||++.
T Consensus       176 ~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCima  220 (376)
T KOG0669|consen  176 TSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMA  220 (376)
T ss_pred             cccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHH
Confidence            3322    2234566899999999999998999999999999975

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.91  E-value=9.1e-24  Score=143.92  Aligned_cols=129  Identities=23%  Similarity=0.319  Sum_probs=105.5

Q ss_pred             cchhhhcccee-----cceeEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhh---------CCcccCCCC
Q 043346            3 EMMKSMSLWVH-----KRENLVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHA---------RKIIHRDLT   67 (135)
Q Consensus         3 ~~~~~~~~~~~-----~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~---------~~i~h~dl~   67 (135)
                      ||++.+....+     ..+|||+++. .|+|.++++. ...+.....+++..++.||+|||+         ..|+|||||
T Consensus       265 nIl~Fi~~ekr~t~~~~eywLVt~fh~kGsL~dyL~~-ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlk  343 (534)
T KOG3653|consen  265 NILQFIGAEKRGTADRMEYWLVTEFHPKGSLCDYLKA-NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLK  343 (534)
T ss_pred             hHHHhhchhccCCccccceeEEeeeccCCcHHHHHHh-ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCcccccccc
Confidence            56666555432     2689999998 6899999998 578999999999999999999996         369999999


Q ss_pred             CcceeeecCCCeeEEecccccccccCCCCC--CCCCCcccccccCcccccCCCCCC-----chhHHHHhhhhhh
Q 043346           68 TMNLLADIENKTVKIAADSGMAKEIDAPFD--AHTTEMVILRYRAPKILFGRTNCF-----AAIDMWAVLYLLR  134 (135)
Q Consensus        68 ~~nil~~~~~~~~~i~~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~-----~~~D~wslg~il~  134 (135)
                      ++||++. +..++.| +|||++..+.....  .....+||..|||||++.+.....     .+.||||+|.++.
T Consensus       344 SkNVLvK-~DlTccI-aDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLW  415 (534)
T KOG3653|consen  344 SKNVLVK-NDLTCCI-ADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLW  415 (534)
T ss_pred             ccceEEc-cCCcEEe-eccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHH
Confidence            9999999 7788999 89999998864422  233478999999999996654333     4689999999874

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.91  E-value=2e-24  Score=136.28  Aligned_cols=128  Identities=23%  Similarity=0.487  Sum_probs=106.3

Q ss_pred             ccchhhhccceec---ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC
Q 043346            2 QEMMKSMSLWVHK---RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN   77 (135)
Q Consensus         2 ~~~~~~~~~~~~~---~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~   77 (135)
                      .||+++++...+.   .+-+++|+.+ .+..+..   ..++...+..++.+++.||.|||+.||.|||+||.|++++...
T Consensus        93 ~NIi~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly---~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~  169 (338)
T KOG0668|consen   93 PNIIKLLDIVKDPESKTPSLIFEYVNNTDFKQLY---PTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHEL  169 (338)
T ss_pred             CCeeehhhhhcCccccCchhHhhhhccccHHHHh---hhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhh
Confidence            3778888777443   5679999995 4665554   4578889999999999999999999999999999999999888


Q ss_pred             CeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           78 KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ..+++ +|+|++....+. ..-...+.+..|--||.+...+.+..+-|+|||||+++
T Consensus       170 rkLrl-IDWGLAEFYHp~-~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA  224 (338)
T KOG0668|consen  170 RKLRL-IDWGLAEFYHPG-KEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA  224 (338)
T ss_pred             ceeee-eecchHhhcCCC-ceeeeeeehhhcCCchheeechhccccHHHHHHHHHHH
Confidence            89999 799999866443 45555666778899999988877889999999999975

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.90  E-value=2e-23  Score=137.72  Aligned_cols=129  Identities=22%  Similarity=0.359  Sum_probs=99.0

Q ss_pred             cchhhhccceec-------ceeEEEeccC-CCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCC
Q 043346            3 EMMKSMSLWVHK-------RENLVFEYVN-INLHKFIQQY------HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTT   68 (135)
Q Consensus         3 ~~~~~~~~~~~~-------~~~lv~e~~~-~~L~~~~~~~------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~   68 (135)
                      |+++.++.....       ..++++|++. ++|.+++...      ..++...+..++.|++.|++|||+++++|+||+|
T Consensus        62 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp  141 (273)
T cd05074          62 NVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAA  141 (273)
T ss_pred             CcceEEEEEccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccch
Confidence            566666655321       2367888884 6998887531      2478899999999999999999999999999999


Q ss_pred             cceeeecCCCeeEEecccccccccCCCCC--CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           69 MNLLADIENKTVKIAADSGMAKEIDAPFD--AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        69 ~nil~~~~~~~~~i~~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +||+++ .++.+++ +|||.+........  ......+++.|++||.+.+.. .+.++|+||||+++|
T Consensus       142 ~nili~-~~~~~kl-~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~sDi~slG~il~  206 (273)
T cd05074         142 RNCMLN-ENMTVCV-ADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNV-YTTHSDVWAFGVTMW  206 (273)
T ss_pred             hhEEEc-CCCCEEE-CcccccccccCCcceecCCCccCchhhcCHhHHhcCc-cchhhhhHHHHHHHH
Confidence            999998 6788999 79999886543221  112233456799999987665 677899999999987

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.90  E-value=8.2e-24  Score=149.18  Aligned_cols=130  Identities=25%  Similarity=0.387  Sum_probs=111.6

Q ss_pred             ccchhhhccceec-ceeEEEecc-CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYV-NINLHKFIQQY--HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN   77 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~   77 (135)
                      .|++++++.+++. -+|+|+||| .|+|.+|+++.  ..++.-..+.++.||..|++||..++++||||..+|.++. ++
T Consensus       323 pNLVqLLGVCT~EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVg-En  401 (1157)
T KOG4278|consen  323 PNLVQLLGVCTHEPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG-EN  401 (1157)
T ss_pred             ccHHHHhhhhccCCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhcccc-cc
Confidence            4899999999877 778999998 79999999873  4577888899999999999999999999999999999999 88


Q ss_pred             CeeEEecccccccccCCCC-CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           78 KTVKIAADSGMAKEIDAPF-DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ..+|+ +|||+++.+..+. +.+...--.+.|.|||.+.-.. ++.++|+|+|||+|+
T Consensus       402 hiVKv-ADFGLsRlMtgDTYTAHAGAKFPIKWTAPEsLAyNt-FSiKSDVWAFGVLLW  457 (1157)
T KOG4278|consen  402 HIVKV-ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNT-FSIKSDVWAFGVLLW  457 (1157)
T ss_pred             ceEEe-eccchhhhhcCCceecccCccCcccccCcccccccc-cccchhhHHHHHHHH
Confidence            99999 8999999887653 3333333456799999997666 788999999999985

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.90  E-value=1.6e-23  Score=151.30  Aligned_cols=130  Identities=25%  Similarity=0.431  Sum_probs=107.5

Q ss_pred             ccchhhhccceec-ceeEEEecc-CCCHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHhhCCccc
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYV-NINLHKFIQQYH----------------PMDSHLIKKFLYCILSGISYCHARKIIH   63 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~-~~~L~~~~~~~~----------------~~~~~~~~~~~~~i~~~l~~lh~~~i~h   63 (135)
                      .|++.+.+..+++ ..++++||+ .|+|.++++++.                .++......++.||+.|++||++..++|
T Consensus       362 ~niv~llG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vH  441 (609)
T KOG0200|consen  362 PNIVNLLGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVH  441 (609)
T ss_pred             cchhhheeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccc
Confidence            4788888888664 788999999 589999998744                3888899999999999999999999999


Q ss_pred             CCCCCcceeeecCCCeeEEecccccccccCCCCCCC-CCCc--ccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           64 RDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAH-TTEM--VILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        64 ~dl~~~nil~~~~~~~~~i~~d~~~~~~~~~~~~~~-~~~~--~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ||+..+||++. .+..+|+ +|||+++.......-. ....  -...|||||.+.... ++.++|+||+|+++|
T Consensus       442 RDLAaRNVLi~-~~~~~kI-aDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~-ft~kSDVWSfGI~L~  512 (609)
T KOG0200|consen  442 RDLAARNVLIT-KNKVIKI-ADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRV-FTSKSDVWSFGILLW  512 (609)
T ss_pred             hhhhhhhEEec-CCCEEEE-ccccceeccCCCCceEecCCCCccceeecCHHHhccCc-ccccchhhHHHHHHH
Confidence            99999999999 7789999 8999999654432211 1111  345699999998855 888999999999987

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.90  E-value=3.1e-24  Score=148.21  Aligned_cols=128  Identities=22%  Similarity=0.366  Sum_probs=108.3

Q ss_pred             cchhhhccc-eecceeEEEeccCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            3 EMMKSMSLW-VHKRENLVFEYVNINLHKFIQQYH---PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         3 ~~~~~~~~~-~~~~~~lv~e~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      ++|+++.-| ..++.|||+|.+.-+|.+.+++.+   ++....+..++.|+..||++|-.+|++|.||||+|||++....
T Consensus       495 Hclrl~r~F~hknHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~  574 (752)
T KOG0670|consen  495 HCLRLFRHFKHKNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKN  574 (752)
T ss_pred             HHHHHHHHhhhcceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcc
Confidence            466776666 455999999999999999999844   6788899999999999999999999999999999999996667


Q ss_pred             eeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           79 TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .+|+ +|||.+.....+  ..+++..+..|.|||+++|.+ +....|+||+||+||
T Consensus       575 iLKL-CDfGSA~~~~en--eitPYLVSRFYRaPEIiLG~~-yd~~iD~WSvgctLY  626 (752)
T KOG0670|consen  575 ILKL-CDFGSASFASEN--EITPYLVSRFYRAPEIILGLP-YDYPIDTWSVGCTLY  626 (752)
T ss_pred             eeee-ccCccccccccc--cccHHHHHHhccCcceeecCc-ccCCccceeeceeeE
Confidence            7788 999998766543  334445566799999999998 677889999999998

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.89  E-value=1.3e-23  Score=143.35  Aligned_cols=131  Identities=21%  Similarity=0.321  Sum_probs=109.4

Q ss_pred             cchhhhcccee--cceeEEEeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhC--CcccCCCCCcceeeecCC
Q 043346            3 EMMKSMSLWVH--KRENLVFEYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHAR--KIIHRDLTTMNLLADIEN   77 (135)
Q Consensus         3 ~~~~~~~~~~~--~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~--~i~h~dl~~~nil~~~~~   77 (135)
                      .|+|.|++++=  +.+|-|.|||+| +|.-+++.+.-.++.++..|+-||+.||.||.+.  .|+|-||||.||++...+
T Consensus       528 RIVKlYDyfslDtdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~Gt  607 (775)
T KOG1151|consen  528 RIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGT  607 (775)
T ss_pred             eeeeeeeeeeeccccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCc
Confidence            47889999843  367899999987 8888888888899999999999999999999985  699999999999987332


Q ss_pred             --CeeEEecccccccccCCC-------CCCCCCCcccccccCcccccC---CCCCCchhHHHHhhhhhh
Q 043346           78 --KTVKIAADSGMAKEIDAP-------FDAHTTEMVILRYRAPKILFG---RTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 --~~~~i~~d~~~~~~~~~~-------~~~~~~~~~~~~~~ape~~~~---~~~~~~~~D~wslg~il~  134 (135)
                        |.+|| .|||+++.+.+.       ....+.+.||-.|++||++.-   .+..+.++|+||+|||+|
T Consensus       608 acGeIKI-TDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFy  675 (775)
T KOG1151|consen  608 ACGEIKI-TDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFY  675 (775)
T ss_pred             ccceeEe-eecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhh
Confidence              67899 799999977543       223456788999999999932   345788999999999998

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.89  E-value=6.1e-23  Score=144.50  Aligned_cols=130  Identities=20%  Similarity=0.379  Sum_probs=112.2

Q ss_pred             ccchhhhccceecceeEEEeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHKRENLVFEYVN-INLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .+|+++.+..++...|+|||.+. |.|..|++.+ ..++-.....++.|+..|+.|||+.+++||||..+||++. ....
T Consensus       451 phIikLIGv~~e~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVs-Sp~C  529 (974)
T KOG4257|consen  451 PHIIKLIGVCVEQPMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVS-SPQC  529 (974)
T ss_pred             cchhheeeeeeccceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeec-Ccce
Confidence            37899999999999999999995 8999999874 4788899999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCC-CCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAH-TTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~-~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +|+ +|||+++.+.+...-. +...-...|||||.+.-+. ++.++|+|-|||++.
T Consensus       530 VKL-aDFGLSR~~ed~~yYkaS~~kLPIKWmaPESINfRr-FTtASDVWMFgVCmW  583 (974)
T KOG4257|consen  530 VKL-ADFGLSRYLEDDAYYKASRGKLPIKWMAPESINFRR-FTTASDVWMFGVCMW  583 (974)
T ss_pred             eee-cccchhhhccccchhhccccccceeecCccccchhc-ccchhhHHHHHHHHH
Confidence            999 8999999886553322 2333466899999997666 889999999999874

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.89  E-value=7.7e-23  Score=154.49  Aligned_cols=123  Identities=15%  Similarity=0.245  Sum_probs=98.2

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCCcceeeecC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCH---ARKIIHRDLTTMNLLADIE   76 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~   76 (135)
                      +|++++++++.++ ..++||||+. ++|.++++.   +++.....++.|++.|++|+|   +.+++|||+||+||+++ .
T Consensus       743 pnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~---l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~-~  818 (968)
T PLN00113        743 PNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN---LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIID-G  818 (968)
T ss_pred             CCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhc---CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEEC-C
Confidence            4788998888554 7889999995 799999964   788899999999999999999   67999999999999998 4


Q ss_pred             CCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           77 NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        77 ~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ....++  .++.......    .....+++.|+|||++.+.. ++.++|+||+||++|.
T Consensus       819 ~~~~~~--~~~~~~~~~~----~~~~~~t~~y~aPE~~~~~~-~~~~sDv~S~Gvvl~e  870 (968)
T PLN00113        819 KDEPHL--RLSLPGLLCT----DTKCFISSAYVAPETRETKD-ITEKSDIYGFGLILIE  870 (968)
T ss_pred             CCceEE--Eecccccccc----CCCccccccccCcccccCCC-CCcccchhhHHHHHHH
Confidence            455554  3444332211    12236788999999997766 7889999999999873

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.88  E-value=4e-22  Score=128.74  Aligned_cols=129  Identities=29%  Similarity=0.488  Sum_probs=108.1

Q ss_pred             ccchhhhcccee-cceeEEEeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVH-KRENLVFEYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~-~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .+++++.+.... ...++++|++++ +|.+++.....++......++.+++.++.++|+.+++|+|++|+||+++ +++.
T Consensus        47 ~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~-~~~~  125 (244)
T smart00220       47 PNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKKRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLD-EDGH  125 (244)
T ss_pred             CcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEEC-CCCc
Confidence            356777777754 478999999965 9999998766689999999999999999999999999999999999999 5688


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +++ .|||.+....... ......++..|++||...+.. .+.++|+||+|++++
T Consensus       126 ~~l-~d~~~~~~~~~~~-~~~~~~~~~~~~~pE~~~~~~-~~~~~Di~slG~~l~  177 (244)
T smart00220      126 VKL-ADFGLARQLDPGG-LLTTFVGTPEYMAPEVLLGKG-YGKAVDVWSLGVILY  177 (244)
T ss_pred             EEE-ccccceeeecccc-ccccccCCcCCCCHHHHccCC-CCchhhHHHHHHHHH
Confidence            899 7999988765432 334456778899999997655 677999999999986

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.87  E-value=8.8e-22  Score=122.48  Aligned_cols=95  Identities=16%  Similarity=0.200  Sum_probs=79.2

Q ss_pred             CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEecccccccccCCCCCCCCCCc
Q 043346           25 INLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEM  103 (135)
Q Consensus        25 ~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~~~~~~~~~~~~~  103 (135)
                      |+|.+++.+ +..+++..+..++.|++.|++|||+++      ||+||+++ .++.+++   ||.+......     ...
T Consensus         1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~-~~~~~~~---fG~~~~~~~~-----~~~   65 (176)
T smart00750        1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLT-WDGLLKL---DGSVAFKTPE-----QSR   65 (176)
T ss_pred             CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEc-Cccceee---ccceEeeccc-----cCC
Confidence            689999987 456999999999999999999999998      99999998 5566664   8877654332     125


Q ss_pred             ccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346          104 VILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus       104 ~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++.|+|||++.+.. ++.++|+||+|+++|.
T Consensus        66 g~~~y~aPE~~~~~~-~~~~~DiwSlG~il~e   96 (176)
T smart00750       66 VDPYFMAPEVIQGQS-YTEKADIYSLGITLYE   96 (176)
T ss_pred             CcccccChHHhcCCC-CcchhhHHHHHHHHHH
Confidence            789999999998776 7889999999999973

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.87  E-value=1.9e-21  Score=137.32  Aligned_cols=120  Identities=25%  Similarity=0.307  Sum_probs=90.5

Q ss_pred             ecceeEEEecc-CCCHHHHHHhcC------------------------CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCC
Q 043346           13 HKRENLVFEYV-NINLHKFIQQYH------------------------PMDSHLIKKFLYCILSGISYCHARKIIHRDLT   67 (135)
Q Consensus        13 ~~~~~lv~e~~-~~~L~~~~~~~~------------------------~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~   67 (135)
                      ++..|+|+||+ +++|.+++....                        ..+...+..++.|++.++.|+|+++++|||||
T Consensus       257 ~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLK  336 (507)
T PLN03224        257 KGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIK  336 (507)
T ss_pred             CCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCc
Confidence            34689999999 569998886411                        23456788899999999999999999999999


Q ss_pred             CcceeeecCCCeeEEecccccccccCCCCCC-CCCCcccccccCcccccCCCC---------------------CCchhH
Q 043346           68 TMNLLADIENKTVKIAADSGMAKEIDAPFDA-HTTEMVILRYRAPKILFGRTN---------------------CFAAID  125 (135)
Q Consensus        68 ~~nil~~~~~~~~~i~~d~~~~~~~~~~~~~-~~~~~~~~~~~ape~~~~~~~---------------------~~~~~D  125 (135)
                      |+||+++ ..+.+++ +|||++......... ......++.|+|||.+.....                     .....|
T Consensus       337 p~NILl~-~~~~~kL-~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~D  414 (507)
T PLN03224        337 PENLLVT-VDGQVKI-IDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFD  414 (507)
T ss_pred             hHhEEEC-CCCcEEE-EeCcCccccccCCccCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccc
Confidence            9999999 5678899 799998755332211 122344789999999853221                     112469


Q ss_pred             HHHhhhhhh
Q 043346          126 MWAVLYLLR  134 (135)
Q Consensus       126 ~wslg~il~  134 (135)
                      +||+||++|
T Consensus       415 vwSlGvil~  423 (507)
T PLN03224        415 SYTAGVLLM  423 (507)
T ss_pred             hhhHHHHHH
Confidence            999999987

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.86  E-value=8.5e-22  Score=143.92  Aligned_cols=127  Identities=20%  Similarity=0.247  Sum_probs=104.9

Q ss_pred             cchhhhccce-ecceeEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            3 EMMKSMSLWV-HKRENLVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         3 ~~~~~~~~~~-~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      ++++.+..+. ....|+||||+ +++|.+++...+.+++..+..++.|++.||.|||.++|+||||||+||+++ ..+.+
T Consensus        65 ~Iv~~~~~~~~~~~~~lVmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~-~~g~v  143 (669)
T cd05610          65 FIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLIS-NEGHI  143 (669)
T ss_pred             CcCeEEEEEEECCEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEc-CCCCE
Confidence            5667766654 34789999999 569999998877889999999999999999999999999999999999998 66889


Q ss_pred             EEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhh
Q 043346           81 KIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLY  131 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~  131 (135)
                      ++ +|||+++.............+++.|++||......+....+++|++|+
T Consensus       144 kL-~DFGls~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~s~~~s~g~  193 (669)
T cd05610         144 KL-TDFGLSKVTLNRELNMMDILTTPSMAKPKNDYSRTPGQVLSLISSLGF  193 (669)
T ss_pred             EE-EeCCCCccccCCcccccccccCccccCccccccCCCCceeeeeeecCc
Confidence            99 799999876555445556788999999998765554455667787774

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.86  E-value=5e-21  Score=122.61  Aligned_cols=131  Identities=27%  Similarity=0.421  Sum_probs=106.2

Q ss_pred             ccchhhhcccee-cceeEEEeccCC-CHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVH-KRENLVFEYVNI-NLHKFIQQYHP-MDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~-~~~~lv~e~~~~-~L~~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      .++++..+++.. ...++++|++.+ +|.+++..... +++.....++.+++.++.++|+.++.|+|++|+|++++ ..+
T Consensus        57 ~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~-~~~  135 (225)
T smart00221       57 PNIVKLYGVFEDPEPLYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLG-MDG  135 (225)
T ss_pred             CChhhheeeeecCCceEEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc-CCC
Confidence            356667666644 478899999965 99999988665 89999999999999999999999999999999999999 568


Q ss_pred             eeEEecccccccccCCCC-CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           79 TVKIAADSGMAKEIDAPF-DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .+++ +|||.+....... .......++..|++||...+....+.++|+|++|++++
T Consensus       136 ~~~l-~d~g~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~  191 (225)
T smart00221      136 LVKL-ADFGLARFIHRDLAALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILY  191 (225)
T ss_pred             CEEE-eeCceeeEecCcccccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHH
Confidence            8898 7999988765442 12334566778999999843333667899999999886

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.86  E-value=7.9e-21  Score=120.03  Aligned_cols=131  Identities=29%  Similarity=0.472  Sum_probs=106.4

Q ss_pred             cchhhhcccee-cceeEEEeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            3 EMMKSMSLWVH-KRENLVFEYVN-INLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         3 ~~~~~~~~~~~-~~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      ++++..+.+.. ...++++|+++ ++|.+++... ..++......++.+++.+++++|+.+++|+|++|.||+++...+.
T Consensus        52 ~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~  131 (215)
T cd00180          52 NIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGK  131 (215)
T ss_pred             CeeeEeeeeecCCeEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCc
Confidence            45555556644 47889999997 6999999875 578999999999999999999999999999999999999942678


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +++ +||+.+..............+...|++||........+.++|+|++|++++
T Consensus       132 ~~l-~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~  185 (215)
T cd00180         132 VKL-ADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILY  185 (215)
T ss_pred             EEE-ecCCceEEccCCcchhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHH
Confidence            888 799999876554322344556778999999976533678899999999986

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.85  E-value=9.1e-22  Score=126.87  Aligned_cols=129  Identities=19%  Similarity=0.325  Sum_probs=98.9

Q ss_pred             ccchhhhccc--eecceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeee-cCC
Q 043346            2 QEMMKSMSLW--VHKRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD-IEN   77 (135)
Q Consensus         2 ~~~~~~~~~~--~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~-~~~   77 (135)
                      ++|++-|+.-  +-+.+++++|++. |+|.+-+.. .++.+.....++.|+++|+.|+|+++++|||||.+||++- .+-
T Consensus        81 ~hIi~tY~vaFqt~d~YvF~qE~aP~gdL~snv~~-~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df  159 (378)
T KOG1345|consen   81 QHIIDTYEVAFQTSDAYVFVQEFAPRGDLRSNVEA-AGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADF  159 (378)
T ss_pred             hhhhHHHHHHhhcCceEEEeeccCccchhhhhcCc-ccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCc
Confidence            4667776554  3446778999995 799887765 4678888999999999999999999999999999999986 344


Q ss_pred             CeeEEecccccccccCCCCCCCCCCcccccccCcccccCCC----CCCchhHHHHhhhhhhC
Q 043346           78 KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRT----NCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~----~~~~~~D~wslg~il~~  135 (135)
                      ..+|+ +|||.+...+.....   .-.+..|.+||.+....    ...+++|+|.||+++||
T Consensus       160 ~rvKl-cDFG~t~k~g~tV~~---~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~  217 (378)
T KOG1345|consen  160 YRVKL-CDFGLTRKVGTTVKY---LEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFY  217 (378)
T ss_pred             cEEEe-eecccccccCceehh---hhhhcccCCcHHHhhccccceEecccccchheeeeeee
Confidence            68889 999998765443211   12345688999884332    24678899999999986

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.84  E-value=6.9e-22  Score=139.59  Aligned_cols=128  Identities=21%  Similarity=0.346  Sum_probs=112.1

Q ss_pred             cchhhhccce-ecceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            3 EMMKSMSLWV-HKRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         3 ~~~~~~~~~~-~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      ||+-.++.+- +...|++||||+ |+|.+...-.+++++.++...++..+.|++|+|+.|-.|||+|-.||++. +.+.+
T Consensus        73 nivay~gsylr~dklwicMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanillt-d~gDv  151 (829)
T KOG0576|consen   73 NIVAYFGSYLRRDKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLT-DEGDV  151 (829)
T ss_pred             ChHHHHhhhhhhcCcEEEEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeec-ccCce
Confidence            5666766664 448999999996 59999888888999999999999999999999999999999999999999 88999


Q ss_pred             EEecccccccccCCCCCCCCCCcccccccCccccc--CCCCCCchhHHHHhhhh
Q 043346           81 KIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILF--GRTNCFAAIDMWAVLYL  132 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~--~~~~~~~~~D~wslg~i  132 (135)
                      ++ +|||.+..++........+.||+.|||||+-.  .+..+...+|+|++|+.
T Consensus       152 kl-aDfgvsaqitati~KrksfiGtpywmapEvaaverkggynqlcdiwa~git  204 (829)
T KOG0576|consen  152 KL-ADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGIT  204 (829)
T ss_pred             ee-cccCchhhhhhhhhhhhcccCCccccchhHHHHHhcccccccccccccccc
Confidence            99 89999999988877888999999999999981  12236778999999964

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.84  E-value=4.5e-21  Score=129.02  Aligned_cols=127  Identities=22%  Similarity=0.401  Sum_probs=103.3

Q ss_pred             cchhhhccc-eecceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            3 EMMKSMSLW-VHKRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         3 ~~~~~~~~~-~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      |+++..+.+ .+++..+|+||++ ....++...   ++..++..+++.++.||+++|.+||+|||+||+|++.+...+.-
T Consensus        96 ni~~~~~~~rnnd~v~ivlp~~~H~~f~~l~~~---l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg  172 (418)
T KOG1167|consen   96 NIIKLNGCFRNNDQVAIVLPYFEHDRFRDLYRS---LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRG  172 (418)
T ss_pred             hhhcchhhhccCCeeEEEecccCccCHHHHHhc---CCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCc
Confidence            667776666 4448899999996 477777765   66889999999999999999999999999999999999887887


Q ss_pred             EEecccccccccC-----------------C----------------C-----------CCCCCCCcccccccCcccccC
Q 043346           81 KIAADSGMAKEID-----------------A----------------P-----------FDAHTTEMVILRYRAPKILFG  116 (135)
Q Consensus        81 ~i~~d~~~~~~~~-----------------~----------------~-----------~~~~~~~~~~~~~~ape~~~~  116 (135)
                      .+ .|||++....                 .                +           ........||++|.|||++..
T Consensus       173 ~L-vDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k  251 (418)
T KOG1167|consen  173 VL-VDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFR  251 (418)
T ss_pred             eE-EechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhh
Confidence            88 6999997210                 0                0           001234689999999999988


Q ss_pred             CCCCCchhHHHHhhhhh
Q 043346          117 RTNCFAAIDMWAVLYLL  133 (135)
Q Consensus       117 ~~~~~~~~D~wslg~il  133 (135)
                      .+..++++|+||.|||+
T Consensus       252 ~~~QttaiDiws~GVI~  268 (418)
T KOG1167|consen  252 CPRQTTAIDIWSAGVIL  268 (418)
T ss_pred             ccCcCCccceeecccee
Confidence            88789999999999986

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.84  E-value=1.6e-21  Score=140.60  Aligned_cols=130  Identities=20%  Similarity=0.336  Sum_probs=110.7

Q ss_pred             ccchhhhccceecceeEEEeccC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHKRENLVFEYVN-INLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|+++++++.-.....+|++++. |+|.+|++. ++.+..+..+.+..||++||+|||+++++||||..+|+++. ....
T Consensus       758 pnl~RLLgvc~~s~~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVk-sP~h  836 (1177)
T KOG1025|consen  758 PNLLRLLGVCMLSTLQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVK-SPNH  836 (1177)
T ss_pred             chHHHHhhhcccchHHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeec-CCCe
Confidence            47889999987777889999995 799999987 46889999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCC--CcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTT--EMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~--~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +|+ .|||+++........-..  ....+.|||-|.+..+. ++.++||||+||.+.
T Consensus       837 vki-tdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~-~thqSDVWsfGVtiW  891 (1177)
T KOG1025|consen  837 VKI-TDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRK-YTHQSDVWSFGVTIW  891 (1177)
T ss_pred             EEE-EecchhhccCcccccccccccccCcHHHHHHHhhccC-CCchhhhhhhhhhHH
Confidence            999 899999987655333222  23356799999998777 889999999999874

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.84  E-value=3.1e-21  Score=137.33  Aligned_cols=130  Identities=22%  Similarity=0.321  Sum_probs=108.1

Q ss_pred             ccchhhhccceecceeEEEeccC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHKRENLVFEYVN-INLHKFIQQ--YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      +++|++++..-+....+|+|.+. |+|.+.+.+  ...+.-....+++.||+.||.||.+++++|||+..+|+++. ...
T Consensus       171 ~hliRLyGvVl~qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNllla-spr  249 (1039)
T KOG0199|consen  171 PHLIRLYGVVLDQPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLA-SPR  249 (1039)
T ss_pred             cceeEEeeeeccchhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheec-ccc
Confidence            47888888887677889999995 799999987  34677888999999999999999999999999999999999 578


Q ss_pred             eeEEecccccccccCCCCCCC---CCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           79 TVKIAADSGMAKEIDAPFDAH---TTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~~---~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .+|| +|||+.+.++.+..-.   -..--...|+|||.+..+. ++.++|+|++||+++
T Consensus       250 tVKI-~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~k-FShaSDvWmyGVTiW  306 (1039)
T KOG0199|consen  250 TVKI-CDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRK-FSHASDVWMYGVTIW  306 (1039)
T ss_pred             eeee-ecccceeccCCCCcceEecCCCcCcccccCHhHhcccc-ccccchhhhhhhhHH
Confidence            9999 8999999876542211   1111234699999998877 889999999999985

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.82  E-value=1.7e-19  Score=122.07  Aligned_cols=119  Identities=17%  Similarity=0.234  Sum_probs=98.6

Q ss_pred             cceeEEEeccCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC----CeeEEecccc
Q 043346           14 KRENLVFEYVNINLHKFIQQY--HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN----KTVKIAADSG   87 (135)
Q Consensus        14 ~~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~----~~~~i~~d~~   87 (135)
                      ...|+||+.++.+|.+.....  +.++..++..++.|++.+++++|+.|++||||||.|++++...    ..+.+ .|||
T Consensus        94 ~~~~iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~l-lDfG  172 (322)
T KOG1164|consen   94 DFNFIVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYL-LDFG  172 (322)
T ss_pred             ceeEEEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEE-EecC
Confidence            367899999999999988653  5899999999999999999999999999999999999998543    45777 6999


Q ss_pred             ccc--ccCCC-------CCC-CCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           88 MAK--EIDAP-------FDA-HTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        88 ~~~--~~~~~-------~~~-~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +++  .....       ... ...+.||..|+++.+..+.. .++..|+||+++++.
T Consensus       173 lar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e-~~r~DDles~~Y~l~  228 (322)
T KOG1164|consen  173 LARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIE-QGRRDDLESLFYMLL  228 (322)
T ss_pred             CCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCc-cCCchhhhhHHHHHH
Confidence            999  32111       111 34567999999999998887 788999999987763

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.82  E-value=2.5e-20  Score=134.12  Aligned_cols=116  Identities=27%  Similarity=0.391  Sum_probs=102.1

Q ss_pred             eEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEecccccccccCCCC
Q 043346           17 NLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPF   96 (135)
Q Consensus        17 ~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~~~~~~   96 (135)
                      .-.||||.++|..++...+.++..++-.++.|++.|++|+|+.|+.|||+|++|+++. .++.+++ +|||.+..+.-+.
T Consensus       397 ~~~mE~~~~Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~-~~g~lki-~Dfg~~~vf~~~~  474 (601)
T KOG0590|consen  397 LQSMEYCPYDLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVT-ENGILKI-IDFGAASVFRYPW  474 (601)
T ss_pred             hhhhhcccHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEe-cCCceEE-eecCcceeeccCc
Confidence            3349999779999999987899999999999999999999999999999999999999 6789999 8999998765443


Q ss_pred             ----CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           97 ----DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        97 ----~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                          ......+|+..|+|||++.+..+..+..|+||.|+++.
T Consensus       475 e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~  516 (601)
T KOG0590|consen  475 EKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYI  516 (601)
T ss_pred             chhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEE
Confidence                34567789999999999999888888999999998864

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.80  E-value=2.8e-19  Score=120.48  Aligned_cols=130  Identities=16%  Similarity=0.284  Sum_probs=104.4

Q ss_pred             ccchhhhcccee--cceeEEEeccC-CCHHHHHHh--------cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcc
Q 043346            2 QEMMKSMSLWVH--KRENLVFEYVN-INLHKFIQQ--------YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMN   70 (135)
Q Consensus         2 ~~~~~~~~~~~~--~~~~lv~e~~~-~~L~~~~~~--------~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~n   70 (135)
                      +|++.+.....+  ..++.++.+.+ |+|..|+..        ....+..+...++.|+..|++|+|+.+++|.||..+|
T Consensus       347 ~nll~V~~V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRN  426 (563)
T KOG1024|consen  347 PNLLSVLGVSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARN  426 (563)
T ss_pred             CCccceeEEEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhc
Confidence            466777655533  36788888887 699999982        1256778899999999999999999999999999999


Q ss_pred             eeeecCCCeeEEecccccccccCCC-CC-CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           71 LLADIENKTVKIAADSGMAKEIDAP-FD-AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        71 il~~~~~~~~~i~~d~~~~~~~~~~-~~-~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .+++ +.-.+|+ .|-.+++..-+. .. .....-....||+||.+.+.. ++..+|+|||||++.
T Consensus       427 CvId-d~LqVkl-tDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~-yssasDvWsfGVllW  489 (563)
T KOG1024|consen  427 CVID-DQLQVKL-TDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSH-YSSASDVWSFGVLLW  489 (563)
T ss_pred             ceeh-hheeEEe-ccchhccccCcccccccCCCCCCcccccCHHHHhhhh-hcchhhhHHHHHHHH
Confidence            9999 7788999 899999866432 22 233445567899999998877 788899999999985

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.80  E-value=4.6e-19  Score=121.79  Aligned_cols=72  Identities=29%  Similarity=0.444  Sum_probs=63.2

Q ss_pred             cchhhhccceec-----ceeEEEeccCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhh-CCcccCCCCCcceeee
Q 043346            3 EMMKSMSLWVHK-----RENLVFEYVNINLHKFIQQ--YHPMDSHLIKKFLYCILSGISYCHA-RKIIHRDLTTMNLLAD   74 (135)
Q Consensus         3 ~~~~~~~~~~~~-----~~~lv~e~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~~~nil~~   74 (135)
                      .||++++.|...     +.++|+|+++-+|...++.  ..+++-..++.|++|++.||.|||+ .||+|-||||+|||+-
T Consensus       143 ~VV~LlD~FkhsGpNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~  222 (590)
T KOG1290|consen  143 CVVQLLDHFKHSGPNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLC  222 (590)
T ss_pred             eeeeeeccceecCCCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeee
Confidence            567777777432     7899999999999999986  4589999999999999999999997 5999999999999973

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.77  E-value=2.2e-18  Score=109.80  Aligned_cols=124  Identities=23%  Similarity=0.271  Sum_probs=98.8

Q ss_pred             cceec-ceeEEEeccCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC--CeeEEecc
Q 043346           10 LWVHK-RENLVFEYVNINLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN--KTVKIAAD   85 (135)
Q Consensus        10 ~~~~~-~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~--~~~~i~~d   85 (135)
                      +.+++ ...+||+.+++||.+.+.- ...++-.+++.++.|++.-++|+|.++.+||||||+|++.+...  ..+.+ +|
T Consensus        79 y~~e~~ynvlVMdLLGPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~L-ID  157 (341)
T KOG1163|consen   79 YGTEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYL-ID  157 (341)
T ss_pred             hccccccceeeeeccCccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEE-Ee
Confidence            33343 5679999999988887763 56799999999999999999999999999999999999987433  34456 79


Q ss_pred             cccccccCCCCC-------CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           86 SGMAKEIDAPFD-------AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        86 ~~~~~~~~~~~~-------~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ||+++.+.+..+       ......||..|.+--...+.. .++..|+-|+|+++.|
T Consensus       158 FGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~e-qSRRDDmeSvgYvLmY  213 (341)
T KOG1163|consen  158 FGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIE-QSRRDDMESVGYVLMY  213 (341)
T ss_pred             ccchhhhccccccccCccccCCccceeeeehhhhhhhhhh-hhhhhhhhhhcceeee
Confidence            999998755432       345568899999887777665 5678899999977654

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.77  E-value=2.2e-18  Score=114.07  Aligned_cols=119  Identities=22%  Similarity=0.293  Sum_probs=101.6

Q ss_pred             ceeEEEeccCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC----CeeEEecccccc
Q 043346           15 RENLVFEYVNINLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN----KTVKIAADSGMA   89 (135)
Q Consensus        15 ~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~----~~~~i~~d~~~~   89 (135)
                      +.-+|+|.+++||.+.++- ..+|+..++..++.|++.-++++|++.++.|||||+|++|+..+    ..+.+ +|||++
T Consensus        98 ~NiLVidLLGPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~Ihi-iDFGmA  176 (449)
T KOG1165|consen   98 YNILVIDLLGPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHI-IDFGMA  176 (449)
T ss_pred             hhhhhhhhhCcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEE-Eeccch
Confidence            5568999999999999985 56899999999999999999999999999999999999998322    35667 799999


Q ss_pred             cccCCCCC-------CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           90 KEIDAPFD-------AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        90 ~~~~~~~~-------~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +..-++.+       ++....||..||+---..|+. .++..|+-|||-+++|
T Consensus       177 K~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrE-QSRRDDLEaLGHvFmY  228 (449)
T KOG1165|consen  177 KEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGRE-QSRRDDLEALGHVFMY  228 (449)
T ss_pred             hhhcCccccccCccccccccccceeeeEeeccccch-hhhhhhHHHhhhhhhh
Confidence            98765533       566789999999998888887 6788899999977765

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.76  E-value=1.3e-17  Score=111.24  Aligned_cols=131  Identities=29%  Similarity=0.473  Sum_probs=105.3

Q ss_pred             cchhhhccceec-ceeEEEeccC-CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC
Q 043346            3 EMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYH---PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN   77 (135)
Q Consensus         3 ~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~   77 (135)
                      ++++..+.+... ..+++++++. +++.+++....   .++......+..|++.+++++|+.+++|||+||+|++++...
T Consensus        59 ~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~  138 (384)
T COG0515          59 NIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDG  138 (384)
T ss_pred             ceeeEEEEEecCCEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCC
Confidence            355666666444 4689999995 58887777654   789999999999999999999999999999999999999443


Q ss_pred             CeeEEecccccccccCCCCC------CCCCCcccccccCcccccCC--CCCCchhHHHHhhhhhh
Q 043346           78 KTVKIAADSGMAKEIDAPFD------AHTTEMVILRYRAPKILFGR--TNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~------~~~~~~~~~~~~ape~~~~~--~~~~~~~D~wslg~il~  134 (135)
                      ..+++ .|||.+........      ......++..|++||...+.  .......|+||+|++++
T Consensus       139 ~~~~l-~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~  202 (384)
T COG0515         139 RVVKL-IDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLY  202 (384)
T ss_pred             CeEEE-eccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHH
Confidence            36888 79999986544332      34677889999999999873  34788899999997765

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.66  E-value=3.1e-16  Score=98.89  Aligned_cols=76  Identities=18%  Similarity=0.278  Sum_probs=63.4

Q ss_pred             ceeEEEeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH-hhCCcccCCCCCcceeeecCCCeeEEeccccccccc
Q 043346           15 RENLVFEYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYC-HARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEI   92 (135)
Q Consensus        15 ~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~l-h~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~~   92 (135)
                      ..++||||+++ ++.....+.++++...+..++.|++.++.++ |+.|++|||+||+||+++ + +.+++ +|||++...
T Consensus        91 ~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~-~~v~L-iDFG~a~~~  167 (190)
T cd05147          91 SHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-D-GKLYI-IDVSQSVEH  167 (190)
T ss_pred             CCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-C-CcEEE-EEccccccC
Confidence            34899999976 5554444456889999999999999999999 799999999999999998 3 67888 799998754


Q ss_pred             C
Q 043346           93 D   93 (135)
Q Consensus        93 ~   93 (135)
                      .
T Consensus       168 ~  168 (190)
T cd05147         168 D  168 (190)
T ss_pred             C
Confidence            3

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.65  E-value=3.1e-17  Score=115.56  Aligned_cols=118  Identities=21%  Similarity=0.266  Sum_probs=99.8

Q ss_pred             hccceecceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEeccc
Q 043346            8 MSLWVHKRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADS   86 (135)
Q Consensus         8 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~   86 (135)
                      +.++++.+.++++++.. +++...+.+...+++.....+...++.+++++|+.++++||+|++||+++ ..|.+++ .||
T Consensus        64 yafqt~~kl~l~ld~~rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld-~~Ghi~~-tdf  141 (612)
T KOG0603|consen   64 YAFQTDGKLYLILDFLRGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLL-LEGHIKL-TDF  141 (612)
T ss_pred             eeeccccchhHhhhhcccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeec-ccCcccc-CCc
Confidence            34456668888999885 58888888878889999999999999999999999999999999999999 7788999 799


Q ss_pred             ccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           87 GMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      |+++..-...    ..+||..|||||++.+   ...++|+||+|++.|
T Consensus       142 glske~v~~~----~~cgt~eymApEI~~g---h~~a~D~ws~gvl~f  182 (612)
T KOG0603|consen  142 GLSKEAVKEK----IACGTYEYRAPEIING---HLSAADWWSFGVLAF  182 (612)
T ss_pred             hhhhHhHhhh----hcccchhhhhhHhhhc---cCCcccchhhhhhHH
Confidence            9998664332    2288999999999983   456789999999876

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.64  E-value=7.1e-16  Score=114.68  Aligned_cols=128  Identities=22%  Similarity=0.208  Sum_probs=105.8

Q ss_pred             hhhhccc-eecceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeee------cC
Q 043346            5 MKSMSLW-VHKRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD------IE   76 (135)
Q Consensus         5 ~~~~~~~-~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~------~~   76 (135)
                      .++.... .++..++|+||.+ |+|.+++...+..++..+..+..|++..+++||..+|+|+||||+|.++.      .+
T Consensus       757 ~~~~~a~~~~~~S~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~  836 (974)
T KOG1166|consen  757 MHISSAHVFQNASVLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSD  836 (974)
T ss_pred             HHHHHHHccCCcceeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCc
Confidence            3343333 5567889999996 79999999878899999999999999999999999999999999999984      34


Q ss_pred             CCeeEEecccccccccCC--CCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           77 NKTVKIAADSGMAKEIDA--PFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        77 ~~~~~i~~d~~~~~~~~~--~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ...+++ +|||.+..+..  +.......++|-.+-++|+..|++ ++..+|.|.++.+++
T Consensus       837 ~~~l~l-IDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grp-WtYq~DyfGlAa~~h  894 (974)
T KOG1166|consen  837 SKGLYL-IDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRP-WTYQIDYFGLAATVH  894 (974)
T ss_pred             ccceEE-EecccceeeeEcCCCcEEeeeeccccchhHHHhcCCC-CchhhhhHHHHHHHH
Confidence            457888 79999986642  223445667888899999999887 999999999987765

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.64  E-value=2.3e-15  Score=102.19  Aligned_cols=119  Identities=21%  Similarity=0.257  Sum_probs=89.8

Q ss_pred             cceeEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC---CeeEEeccccccc
Q 043346           14 KRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN---KTVKIAADSGMAK   90 (135)
Q Consensus        14 ~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~---~~~~i~~d~~~~~   90 (135)
                      ...|+||.....+|++++..+ ..+.....-++.|+++|+.|||+.|+.|||+|.+||++..+.   ..+.+ +|||++-
T Consensus       316 ~tlylvMkrY~~tLr~yl~~~-~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVv-aDFGCcL  393 (598)
T KOG4158|consen  316 KTLYLVMKRYRQTLREYLWTR-HRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVV-ADFGCCL  393 (598)
T ss_pred             ceEEEehhcchhhHHHHHhcC-CCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEE-cccceee
Confidence            368999999999999999873 456777888899999999999999999999999999997443   24455 8999874


Q ss_pred             ccCC-----C-CCCCCCCcccccccCcccccCCCC-----CCchhHHHHhhhhhh
Q 043346           91 EIDA-----P-FDAHTTEMVILRYRAPKILFGRTN-----CFAAIDMWAVLYLLR  134 (135)
Q Consensus        91 ~~~~-----~-~~~~~~~~~~~~~~ape~~~~~~~-----~~~~~D~wslg~il~  134 (135)
                      --..     + ....-+.-|....||||+....+.     .-.++|.|+.|.+.|
T Consensus       394 Ad~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaY  448 (598)
T KOG4158|consen  394 ADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAY  448 (598)
T ss_pred             eccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHH
Confidence            2211     1 111123345667899999855442     234789999999877

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.63  E-value=6.9e-16  Score=105.48  Aligned_cols=94  Identities=18%  Similarity=0.141  Sum_probs=70.6

Q ss_pred             cceeEEEeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCC-CCcceeeecCCCeeEEecccccccc
Q 043346           14 KRENLVFEYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDL-TTMNLLADIENKTVKIAADSGMAKE   91 (135)
Q Consensus        14 ~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl-~~~nil~~~~~~~~~i~~d~~~~~~   91 (135)
                      +..|+||||+.| +|.. ...   ..   ...++.|++.++.+||++|++|||| ||+||+++ ..+.+++ +|||+++.
T Consensus        91 ~~~~LVmE~~~G~~L~~-~~~---~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~-~~~~ikL-iDFGlA~~  161 (365)
T PRK09188         91 GKDGLVRGWTEGVPLHL-ARP---HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMG-PDGEAAV-IDFQLASV  161 (365)
T ss_pred             CCcEEEEEccCCCCHHH-hCc---cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEc-CCCCEEE-EECcccee
Confidence            468999999965 7863 211   11   1467889999999999999999999 99999998 5678899 79999987


Q ss_pred             cCCCCCCC--------CCCcccccccCcccccC
Q 043346           92 IDAPFDAH--------TTEMVILRYRAPKILFG  116 (135)
Q Consensus        92 ~~~~~~~~--------~~~~~~~~~~ape~~~~  116 (135)
                      +.......        ....+++.|+|||.+..
T Consensus       162 ~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~  194 (365)
T PRK09188        162 FRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP  194 (365)
T ss_pred             cccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence            65432111        23456777899998843

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.63  E-value=1.4e-15  Score=95.97  Aligned_cols=76  Identities=18%  Similarity=0.240  Sum_probs=63.0

Q ss_pred             eeEEEeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhh-CCcccCCCCCcceeeecCCCeeEEecccccccccC
Q 043346           16 ENLVFEYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHA-RKIIHRDLTTMNLLADIENKTVKIAADSGMAKEID   93 (135)
Q Consensus        16 ~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~~~   93 (135)
                      .++|||+++| ++.........++......++.|++.++.++|. +|++|+|+||.||+++  .+.+++ +|||++....
T Consensus        92 ~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~--~~~~~l-iDFG~a~~~~  168 (190)
T cd05145          92 NVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH--DGKPYI-IDVSQAVELD  168 (190)
T ss_pred             CEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE--CCCEEE-EEcccceecC
Confidence            4899999975 444332334567888999999999999999999 9999999999999998  477888 7999997664


Q ss_pred             C
Q 043346           94 A   94 (135)
Q Consensus        94 ~   94 (135)
                      .
T Consensus       169 ~  169 (190)
T cd05145         169 H  169 (190)
T ss_pred             C
Confidence            4

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.63  E-value=2.7e-16  Score=101.08  Aligned_cols=96  Identities=16%  Similarity=0.162  Sum_probs=69.1

Q ss_pred             ceeEEEeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEecccccccccC
Q 043346           15 RENLVFEYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEID   93 (135)
Q Consensus        15 ~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~~~   93 (135)
                      ..+++|||++| +|.+..    ..++    ....++..++..+|+.|++|+|++|+|++++ ..+ +++ +|||......
T Consensus       117 ~~~lvmEyi~G~tL~~~~----~~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~-~~g-i~l-iDfg~~~~~~  185 (232)
T PRK10359        117 TYIMLIEYIEGVELNDMP----EISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVS-KNG-LRI-IDLSGKRCTA  185 (232)
T ss_pred             CeEEEEEEECCccHHHhh----hccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEe-CCC-EEE-EECCCccccc
Confidence            57899999976 887763    2233    2456899999999999999999999999998 445 888 7999876542


Q ss_pred             CCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           94 APFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        94 ~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .... .           ......+. +..++|+||||+.+.
T Consensus       186 e~~a-~-----------d~~vler~-y~~~~di~~lg~~~~  213 (232)
T PRK10359        186 QRKA-K-----------DRIDLERH-YGIKNEIKDLGYYLL  213 (232)
T ss_pred             chhh-H-----------HHHHHHhH-hcccccccceeEeeh
Confidence            2210 0           01223333 446789999998764

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.61  E-value=1.3e-16  Score=110.51  Aligned_cols=114  Identities=21%  Similarity=0.383  Sum_probs=95.2

Q ss_pred             ceeEEEeccC-CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEeccccccc
Q 043346           15 RENLVFEYVN-INLHKFIQQY---HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAK   90 (135)
Q Consensus        15 ~~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~   90 (135)
                      ..|+.|+.|. .+|.+.+...   ..-+......++.|+..+++|   ++.+|+|++|.||+.. ....+++ .|||+..
T Consensus       330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~-~d~q~kI-gDFgl~t  404 (516)
T KOG1033|consen  330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFS-DDDQLKI-GDFGLVT  404 (516)
T ss_pred             chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccc-cchhhhh-hhhhhee
Confidence            5789999995 6999999753   245677889999999999999   9999999999999988 6667899 7999987


Q ss_pred             ccCCCC------CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           91 EIDAPF------DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        91 ~~~~~~------~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ......      ...+...+|..||+||.+.+.. ++.++|+||||++||
T Consensus       405 s~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~-y~~kvdIyaLGlil~  453 (516)
T KOG1033|consen  405 SQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQ-YSEKVDIYALGLILA  453 (516)
T ss_pred             ecccCCcccchhhhhhhcccccccCCHHHHhhhh-hhhhcchhhHHHHHH
Confidence            654332      2345668899999999999887 789999999999987

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.58  E-value=5.1e-15  Score=93.77  Aligned_cols=112  Identities=13%  Similarity=-0.007  Sum_probs=77.3

Q ss_pred             cceeEEEeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCC-CCcceeeecCCCeeEEecccccccc
Q 043346           14 KRENLVFEYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDL-TTMNLLADIENKTVKIAADSGMAKE   91 (135)
Q Consensus        14 ~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl-~~~nil~~~~~~~~~i~~d~~~~~~   91 (135)
                      +..+++|||+.| +|.+....       ....++.|++.+++++|++|++|+|| ||.||+++ ..+.+++ +|||++..
T Consensus        71 ~~~~lvmeyI~G~~L~~~~~~-------~~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~-~~g~i~L-IDFG~A~~  141 (218)
T PRK12274         71 DGRHLDRSYLAGAAMYQRPPR-------GDLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQ-EDGSPAV-IDFQLAVR  141 (218)
T ss_pred             cCEEEEEeeecCccHHhhhhh-------hhHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEc-CCCCEEE-EECCCcee
Confidence            356899999966 77654322       12357789999999999999999999 79999998 5677888 79999985


Q ss_pred             cCCCCCC----C---------CCCcccccccCcccccCCCC-CCchhHHHHhhhhhh
Q 043346           92 IDAPFDA----H---------TTEMVILRYRAPKILFGRTN-CFAAIDMWAVLYLLR  134 (135)
Q Consensus        92 ~~~~~~~----~---------~~~~~~~~~~ape~~~~~~~-~~~~~D~wslg~il~  134 (135)
                      .......    .         .-...++.+++|+.-.-... .-...++++.|+-+|
T Consensus       142 ~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~  198 (218)
T PRK12274        142 GNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVY  198 (218)
T ss_pred             cCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHH
Confidence            5433211    0         01134667777766533221 224568888887765

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.56  E-value=1.5e-15  Score=100.42  Aligned_cols=116  Identities=13%  Similarity=0.165  Sum_probs=76.8

Q ss_pred             ceeEEEeccCCCHHHHHHh---cCCCC----HHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEecccc
Q 043346           15 RENLVFEYVNINLHKFIQQ---YHPMD----SHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSG   87 (135)
Q Consensus        15 ~~~lv~e~~~~~L~~~~~~---~~~~~----~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~~   87 (135)
                      +.+++|+.+.+||.+.+..   .....    ......+..|++..++++|+.|++|+||+|+|++++ .+|.+.+ .||+
T Consensus       113 n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~~~nfll~-~~G~v~L-g~F~  190 (288)
T PF14531_consen  113 NRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIKPENFLLD-QDGGVFL-GDFS  190 (288)
T ss_dssp             SEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEE--TTS-EEE---GG
T ss_pred             hhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccceeeEEEc-CCCCEEE-cChH
Confidence            3577888888888888653   22221    112234458889999999999999999999999999 6799999 7998


Q ss_pred             cccccCCCCCCCCCCcccccccCcccccCC-------CCCCchhHHHHhhhhhhC
Q 043346           88 MAKEIDAPFDAHTTEMVILRYRAPKILFGR-------TNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-------~~~~~~~D~wslg~il~~  135 (135)
                      .....+.....   ...+..|.+||.....       ...+.+.|.|+||+++|+
T Consensus       191 ~~~r~g~~~~~---~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~  242 (288)
T PF14531_consen  191 SLVRAGTRYRC---SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYS  242 (288)
T ss_dssp             GEEETTEEEEG---GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHH
T ss_pred             HHeecCceeec---cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHH
Confidence            87765544322   2334678899987432       226778999999999984

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.53  E-value=5.6e-15  Score=109.59  Aligned_cols=83  Identities=25%  Similarity=0.412  Sum_probs=69.0

Q ss_pred             HHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEecccccccccCCCC-C--------------CCCCCcccccccCccc
Q 043346           49 ILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPF-D--------------AHTTEMVILRYRAPKI  113 (135)
Q Consensus        49 i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~~~~~~-~--------------~~~~~~~~~~~~ape~  113 (135)
                      ++.+++|+|..+|+|||+||+|.++. .-+.+|+ .|||+.+...-.. .              .-...++||.|.|||+
T Consensus       152 mvla~Eylh~ygivhrdlkpdnllIT-~mGhiKl-TDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeV  229 (1205)
T KOG0606|consen  152 MVLAVEYLHSYGIVHRDLKPDNLLIT-SMGHIKL-TDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEV  229 (1205)
T ss_pred             hhHHhHhhccCCeecCCCCCCcceee-ecccccc-cchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhh
Confidence            37889999999999999999999999 6789999 7999997542110 0              1233589999999999


Q ss_pred             ccCCCCCCchhHHHHhhhhhh
Q 043346          114 LFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus       114 ~~~~~~~~~~~D~wslg~il~  134 (135)
                      +..+. |+..+|+|++|+|+|
T Consensus       230 ilrqg-ygkpvdwwamGiIly  249 (1205)
T KOG0606|consen  230 ILRQG-YGKPVDWWAMGIILY  249 (1205)
T ss_pred             hhhhc-cCCCccHHHHHHHHH
Confidence            98766 788999999999998

>smart00090 RIO RIO-like kinase

Probab=99.52  E-value=2.8e-14  Score=92.81  Aligned_cols=79  Identities=23%  Similarity=0.274  Sum_probs=64.8

Q ss_pred             cceeEEEeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCCcceeeecCCCeeEEecccccccc
Q 043346           14 KRENLVFEYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARK-IIHRDLTTMNLLADIENKTVKIAADSGMAKE   91 (135)
Q Consensus        14 ~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~-i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~   91 (135)
                      ...++|||++++ +|.................++.|++.++.++|+.| ++|+|++|+||+++  .+.+++ +|||.+..
T Consensus       121 ~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~--~~~i~L-iDFg~a~~  197 (237)
T smart00090      121 RRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH--DGKVVI-IDVSQSVE  197 (237)
T ss_pred             cCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE--CCCEEE-EEChhhhc
Confidence            356899999976 66665544455667778899999999999999999 99999999999998  567888 79999876


Q ss_pred             cCCC
Q 043346           92 IDAP   95 (135)
Q Consensus        92 ~~~~   95 (135)
                      ...+
T Consensus       198 ~~~~  201 (237)
T smart00090      198 LDHP  201 (237)
T ss_pred             cCCc
Confidence            5544

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.48  E-value=1.2e-14  Score=108.38  Aligned_cols=121  Identities=21%  Similarity=0.219  Sum_probs=89.6

Q ss_pred             eecceeEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEecccccccc
Q 043346           12 VHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKE   91 (135)
Q Consensus        12 ~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~   91 (135)
                      +++..|+|-+|..-+|++++.-+.-+..-+.+-++.|++.|++.||+.||+|+|||.+||++. .-..+.+ +||...+.
T Consensus        92 t~kAAylvRqyvkhnLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiT-SWNW~~L-tDFAsFKP  169 (1431)
T KOG1240|consen   92 TDKAAYLVRQYVKHNLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILIT-SWNWLYL-TDFASFKP  169 (1431)
T ss_pred             hhHHHHHHHHHHhhhhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEe-eechhhh-hcccccCC
Confidence            344567777777778999888766667778888999999999999999999999999999999 4456677 79987654


Q ss_pred             cCCCCCCCC-------CCcccccccCcccccCCC---------C-CCchhHHHHhhhhhh
Q 043346           92 IDAPFDAHT-------TEMVILRYRAPKILFGRT---------N-CFAAIDMWAVLYLLR  134 (135)
Q Consensus        92 ~~~~~~~~~-------~~~~~~~~~ape~~~~~~---------~-~~~~~D~wslg~il~  134 (135)
                      ..-+.....       +...-..|.|||-+....         + .+++=|+||+||+++
T Consensus       170 tYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCVia  229 (1431)
T KOG1240|consen  170 TYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIA  229 (1431)
T ss_pred             ccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHH
Confidence            432222111       112234699999984311         1 456789999999985

>PRK10345 hypothetical protein; Provisional

Probab=99.48  E-value=1.6e-13  Score=87.59  Aligned_cols=86  Identities=15%  Similarity=0.198  Sum_probs=64.8

Q ss_pred             ccchhhhccceec----cee-EEEeccC---CCHHHHHHhcCCCCHHHHHHHHHHHHHHH-HHHhhCCcccCCCCCccee
Q 043346            2 QEMMKSMSLWVHK----REN-LVFEYVN---INLHKFIQQYHPMDSHLIKKFLYCILSGI-SYCHARKIIHRDLTTMNLL   72 (135)
Q Consensus         2 ~~~~~~~~~~~~~----~~~-lv~e~~~---~~L~~~~~~~~~~~~~~~~~~~~~i~~~l-~~lh~~~i~h~dl~~~nil   72 (135)
                      .||++.++++..+    ..+ +|+|+.+   ++|.+++++ +.+++.  ...+.|++.++ +|||+++|+||||||+||+
T Consensus        61 ~nIvr~yg~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~~-~~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NIL  137 (210)
T PRK10345         61 SGIPRYYGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQ-CRYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNIL  137 (210)
T ss_pred             cccceeeEEEEeCCCCeEEEEEEecCCCCcchhHHHHHHc-ccccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEE
Confidence            4788888888554    233 7899954   699999977 456655  35678888777 9999999999999999999


Q ss_pred             eecC---CCeeEEecc-cccccc
Q 043346           73 ADIE---NKTVKIAAD-SGMAKE   91 (135)
Q Consensus        73 ~~~~---~~~~~i~~d-~~~~~~   91 (135)
                      ++..   ...+++ +| ||....
T Consensus       138 l~~~~~~~~~~~L-iDg~G~~~~  159 (210)
T PRK10345        138 CQRISESEVIPVV-CDNIGESTF  159 (210)
T ss_pred             EeccCCCCCcEEE-EECCCCcce
Confidence            9742   236888 79 554443

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.44  E-value=1.9e-14  Score=104.05  Aligned_cols=130  Identities=25%  Similarity=0.312  Sum_probs=104.7

Q ss_pred             cchhhhccceec-ceeEEEeccC-CCHHHHH-HhcC-CCCHHHHHHHHHHHHHHHHHHh-hCCcccCCCCCcceeeecCC
Q 043346            3 EMMKSMSLWVHK-RENLVFEYVN-INLHKFI-QQYH-PMDSHLIKKFLYCILSGISYCH-ARKIIHRDLTTMNLLADIEN   77 (135)
Q Consensus         3 ~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~-~~~~-~~~~~~~~~~~~~i~~~l~~lh-~~~i~h~dl~~~nil~~~~~   77 (135)
                      |++..++...+. ..+++.++.. +++...+ .... ..++.....++.|+..++.|+| ..++.|+|++|+|.+++ .+
T Consensus        82 n~~~~~~~~~~~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~-~s  160 (601)
T KOG0590|consen   82 NTVHMIEPSSSPRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLD-ES  160 (601)
T ss_pred             cccccCCccCCCcccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhc-cC
Confidence            566677777655 5668888874 5888887 4433 6778888999999999999999 99999999999999999 55


Q ss_pred             C-eeEEecccccccccCC-C--CCCCCCCcc-cccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           78 K-TVKIAADSGMAKEIDA-P--FDAHTTEMV-ILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 ~-~~~i~~d~~~~~~~~~-~--~~~~~~~~~-~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      + ..++ +|||++..... .  ........| ++.|+|||...+..+..+..|+||.|+++.
T Consensus       161 ~~~l~~-~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~  221 (601)
T KOG0590|consen  161 GSALKI-ADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLS  221 (601)
T ss_pred             CCcccC-CCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCccccccccccc
Confidence            6 7888 89999987654 2  223345677 999999999988766788999999998863

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.38  E-value=1.2e-12  Score=91.86  Aligned_cols=130  Identities=22%  Similarity=0.325  Sum_probs=100.2

Q ss_pred             cchhhhccceec-ceeEEEeccC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCc-ccCCCCCcceeeecCCC
Q 043346            3 EMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKI-IHRDLTTMNLLADIENK   78 (135)
Q Consensus         3 ~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i-~h~dl~~~nil~~~~~~   78 (135)
                      |+.+..+...+. ....|.++|. |+|.+.+.. .-.++.-....+.++++.|+.|+|...+ .|+.+++.|.+++ ...
T Consensus         8 n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nClvd-~~w   86 (484)
T KOG1023|consen    8 NLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNCLVD-SRW   86 (484)
T ss_pred             hhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccceee-eeE
Confidence            566777777544 7788999995 899999987 4467777888889999999999999765 8999999999999 788


Q ss_pred             eeEEecccccccccCC--CCCCCCCCcccccccCcccccCCC--C----CCchhHHHHhhhhhh
Q 043346           79 TVKIAADSGMAKEIDA--PFDAHTTEMVILRYRAPKILFGRT--N----CFAAIDMWAVLYLLR  134 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~--~~~~~~~~~~~~~~~ape~~~~~~--~----~~~~~D~wslg~il~  134 (135)
                      .+|+ .|||+......  .............|.|||.+.+..  .    .+.+.|+||+|++++
T Consensus        87 ~lkl-t~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~  149 (484)
T KOG1023|consen   87 VLKL-TDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMY  149 (484)
T ss_pred             EEEe-chhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHH
Confidence            9999 89999886643  111122222344699999996642  1    356789999999986

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.37  E-value=3.7e-12  Score=83.07  Aligned_cols=71  Identities=20%  Similarity=0.272  Sum_probs=57.9

Q ss_pred             eeEEEeccCC--CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEecccccccccC
Q 043346           16 ENLVFEYVNI--NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEID   93 (135)
Q Consensus        16 ~~lv~e~~~~--~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~~~   93 (135)
                      .++|||+++|  +|.+++.. ..+++..    +.+++.++.++|+.|++|+|++|.||+++ ..+.+++ +|||.+....
T Consensus       121 ~~lV~e~l~G~~~L~~~l~~-~~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~-~~~~v~L-IDfg~~~~~~  193 (239)
T PRK01723        121 ADILIERIEGARDLVALLQE-APLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLD-PDGKFWL-IDFDRGELRT  193 (239)
T ss_pred             eeEEEEecCCCCCHHHHHhc-CCCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEc-CCCCEEE-EECCCcccCC
Confidence            3599999963  89888865 4555543    57899999999999999999999999998 4567888 7999887654

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.36  E-value=4.6e-12  Score=80.97  Aligned_cols=73  Identities=25%  Similarity=0.243  Sum_probs=61.8

Q ss_pred             ecceeEEEeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEecccccccc
Q 043346           13 HKRENLVFEYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKE   91 (135)
Q Consensus        13 ~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~   91 (135)
                      ....+++||+++| +|.+.+.....    ....++.+++.++.++|+.+++|+|++|.||+++  .+.+++ +|||.+..
T Consensus        71 ~~~~~lv~e~~~G~~L~~~~~~~~~----~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~--~~~~~l-iDf~~a~~  143 (211)
T PRK14879         71 PENFIIVMEYIEGEPLKDLINSNGM----EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS--GGKIYL-IDFGLAEF  143 (211)
T ss_pred             CCCCEEEEEEeCCcCHHHHHHhccH----HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE--CCCEEE-EECCcccC
Confidence            3477899999965 99998866322    7888999999999999999999999999999998  466788 79998875


Q ss_pred             c
Q 043346           92 I   92 (135)
Q Consensus        92 ~   92 (135)
                      .
T Consensus       144 ~  144 (211)
T PRK14879        144 S  144 (211)
T ss_pred             C
Confidence            3

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.35  E-value=2.3e-12  Score=84.18  Aligned_cols=126  Identities=17%  Similarity=0.247  Sum_probs=90.8

Q ss_pred             ccchhhhcccee-cceeEEEeccC-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhCC--cccCCCCCcceeeec
Q 043346            2 QEMMKSMSLWVH-KRENLVFEYVN-INLHKFIQQYH--PMDSHLIKKFLYCILSGISYCHARK--IIHRDLTTMNLLADI   75 (135)
Q Consensus         2 ~~~~~~~~~~~~-~~~~lv~e~~~-~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lh~~~--i~h~dl~~~nil~~~   75 (135)
                      .|++.+.+.+.. ++..++.+|+. |+|++.+.+..  -.+..++.+++.+++.|+.|||+..  +..--++..+++++ 
T Consensus       247 pnilpvlgacnsppnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmid-  325 (448)
T KOG0195|consen  247 PNILPVLGACNSPPNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMID-  325 (448)
T ss_pred             CchhhhhhhccCCCCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEec-
Confidence            477778777744 48899999996 79999998744  3567889999999999999999853  44456788888888 


Q ss_pred             CCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCC--CCchhHHHHhhhhhh
Q 043346           76 ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTN--CFAAIDMWAVLYLLR  134 (135)
Q Consensus        76 ~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~--~~~~~D~wslg~il~  134 (135)
                      +.-+.++  ..+-.+..    -........|.||+||.++.++.  .-.++|+|||++++.
T Consensus       326 edltari--smad~kfs----fqe~gr~y~pawmspealqrkped~n~raadmwsfaillw  380 (448)
T KOG0195|consen  326 EDLTARI--SMADTKFS----FQEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLW  380 (448)
T ss_pred             chhhhhe--ecccceee----eeccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHH
Confidence            4444444  22222211    12233455789999999977653  345789999999875

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.33  E-value=5.4e-12  Score=90.86  Aligned_cols=69  Identities=23%  Similarity=0.385  Sum_probs=58.8

Q ss_pred             cceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEeccccccccc
Q 043346           14 KRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEI   92 (135)
Q Consensus        14 ~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~~   92 (135)
                      ...+++|||++ ++|.+++.        ....++.+++.++.++|+.+++|||+||+||+++  .+.+++ +|||+++..
T Consensus       409 ~~~~lv~E~~~g~~L~~~l~--------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl~--~~~~~l-iDFGla~~~  477 (535)
T PRK09605        409 EEKTIVMEYIGGKDLKDVLE--------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIVR--DDRLYL-IDFGLGKYS  477 (535)
T ss_pred             CCCEEEEEecCCCcHHHHHH--------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEEE--CCcEEE-EeCcccccC
Confidence            36789999995 59988875        3467889999999999999999999999999995  467888 799999764


Q ss_pred             C
Q 043346           93 D   93 (135)
Q Consensus        93 ~   93 (135)
                      .
T Consensus       478 ~  478 (535)
T PRK09605        478 D  478 (535)
T ss_pred             C
Confidence            3

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.31  E-value=7.7e-12  Score=79.28  Aligned_cols=69  Identities=26%  Similarity=0.384  Sum_probs=57.9

Q ss_pred             cceeEEEeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEeccccccccc
Q 043346           14 KRENLVFEYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEI   92 (135)
Q Consensus        14 ~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~~   92 (135)
                      +..+++||+++| +|.+.+.....       .++.+++.++.++|+.+++|+|++|.|++++  .+.+++ +|||++...
T Consensus        70 ~~~~lv~e~~~g~~l~~~~~~~~~-------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~--~~~~~l-iDfg~a~~~  139 (199)
T TIGR03724        70 DNKTIVMEYIEGKPLKDVIEEGND-------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR--DDKLYL-IDFGLGKYS  139 (199)
T ss_pred             CCCEEEEEEECCccHHHHHhhcHH-------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE--CCcEEE-EECCCCcCC
Confidence            356899999964 99888765321       7889999999999999999999999999998  477888 799988754

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.29  E-value=1.1e-11  Score=78.63  Aligned_cols=72  Identities=28%  Similarity=0.353  Sum_probs=58.2

Q ss_pred             cceeEEEeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEeccccccccc
Q 043346           14 KRENLVFEYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEI   92 (135)
Q Consensus        14 ~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~~   92 (135)
                      ...+++||+++| +|.+....      .....++.+++.++.++|+.+++|+|++|.||+++ ..+.+++ +|||.+...
T Consensus       104 ~~~~lv~e~~~g~~L~~~~~~------~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~-~~~~~~l-iDfg~~~~~  175 (198)
T cd05144         104 NRHAVVMEYIDGVELYRVRVL------EDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVD-DDEKIYI-IDWPQMVST  175 (198)
T ss_pred             CCceEEEEEeCCcchhhcccc------ccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEc-CCCcEEE-EECCccccC
Confidence            356899999965 77554321      34567889999999999999999999999999998 5778898 799998654


Q ss_pred             C
Q 043346           93 D   93 (135)
Q Consensus        93 ~   93 (135)
                      .
T Consensus       176 ~  176 (198)
T cd05144         176 D  176 (198)
T ss_pred             C
Confidence            3

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.20  E-value=6.7e-11  Score=74.23  Aligned_cols=75  Identities=25%  Similarity=0.304  Sum_probs=57.1

Q ss_pred             ceeEEEeccCC-CHH-HHHHhcCCCCHHHHHHHHHHHHHHHHHHhh-CCcccCCCCCcceeeecCCCeeEEecccccccc
Q 043346           15 RENLVFEYVNI-NLH-KFIQQYHPMDSHLIKKFLYCILSGISYCHA-RKIIHRDLTTMNLLADIENKTVKIAADSGMAKE   91 (135)
Q Consensus        15 ~~~lv~e~~~~-~L~-~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~   91 (135)
                      ..+++||++++ ++. ..+... .. ......++.+++.++.++|. .+++|+|++|+||+++  .+.+++ +|||.+..
T Consensus        89 ~~~lv~e~~~g~~~~~~~l~~~-~~-~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~--~~~~~l-iDfg~a~~  163 (187)
T cd05119          89 RHVLVMEFIGGDGIPAPRLKDV-RL-LEDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD--DGKVYI-IDVPQAVE  163 (187)
T ss_pred             CCEEEEEEeCCCCccChhhhhh-hh-cccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE--CCcEEE-EECccccc
Confidence            46899999965 221 112111 11 16678899999999999999 9999999999999999  577888 79999876


Q ss_pred             cCC
Q 043346           92 IDA   94 (135)
Q Consensus        92 ~~~   94 (135)
                      ...
T Consensus       164 ~~~  166 (187)
T cd05119         164 IDH  166 (187)
T ss_pred             ccC
Confidence            544

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.18  E-value=1.1e-10  Score=73.72  Aligned_cols=79  Identities=20%  Similarity=0.283  Sum_probs=58.9

Q ss_pred             cceeEEEeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH-hhCCcccCCCCCcceeeecCCCeeEEecccccccc
Q 043346           14 KRENLVFEYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYC-HARKIIHRDLTTMNLLADIENKTVKIAADSGMAKE   91 (135)
Q Consensus        14 ~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~l-h~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~   91 (135)
                      .+.++|||++++ .+....-+...++++....+..+++.++..+ |+.|++|+|+++.||++. + +.+.+ +||+.+..
T Consensus        97 ~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL~~-~-~~v~i-IDF~qav~  173 (197)
T cd05146          97 KKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNMLWH-D-GKVWF-IDVSQSVE  173 (197)
T ss_pred             cCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEE-C-CcEEE-EECCCcee
Confidence            357899999975 3322112223455667778889999999988 899999999999999997 3 55777 79998876


Q ss_pred             cCCC
Q 043346           92 IDAP   95 (135)
Q Consensus        92 ~~~~   95 (135)
                      ...+
T Consensus       174 ~~hp  177 (197)
T cd05146         174 PTHP  177 (197)
T ss_pred             CCCC
Confidence            5443

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.14  E-value=7.9e-11  Score=83.25  Aligned_cols=128  Identities=19%  Similarity=0.225  Sum_probs=101.4

Q ss_pred             cchhhhccceec-ceeEEEeccCCCHHHHHHhcCC-CCHHHHHHHHHHHHH----HHHHHhhCCcccCCCCCcceeeecC
Q 043346            3 EMMKSMSLWVHK-RENLVFEYVNINLHKFIQQYHP-MDSHLIKKFLYCILS----GISYCHARKIIHRDLTTMNLLADIE   76 (135)
Q Consensus         3 ~~~~~~~~~~~~-~~~lv~e~~~~~L~~~~~~~~~-~~~~~~~~~~~~i~~----~l~~lh~~~i~h~dl~~~nil~~~~   76 (135)
                      |.++....|... ..|+-.|.++.+|.++...... +++...+..+.+...    |+.++|..+++|-|++|.|++...+
T Consensus       179 ~~v~~~~~~e~~~~lfiqtE~~~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~  258 (524)
T KOG0601|consen  179 NPVRDSPAWEGSGILFIQTELCGESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSD  258 (524)
T ss_pred             cccccCcccccCCcceeeeccccchhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccc
Confidence            345556666544 7888899999999999987554 788889999999999    9999999999999999999999944


Q ss_pred             CCeeEEecccccccccCCCCCC-----CCCCcccccccCcccccCCCCCCchhHHHHhhhhh
Q 043346           77 NKTVKIAADSGMAKEIDAPFDA-----HTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLL  133 (135)
Q Consensus        77 ~~~~~i~~d~~~~~~~~~~~~~-----~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il  133 (135)
                      ....+. .||++...+.+..-.     .....+...|++||...+.  .+...|++++|-++
T Consensus       259 ~~s~~~-~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l--~~~~~di~sl~ev~  317 (524)
T KOG0601|consen  259 WTSCKL-TDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGL--ATFASDIFSLGEVI  317 (524)
T ss_pred             cceeec-CCcceeEEccCCccccceeeeecCCCCceEeChhhhccc--cchHhhhcchhhhh
Confidence            477777 799999887654321     1222567789999999776  57788999999664

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=99.04  E-value=2.5e-09  Score=68.36  Aligned_cols=77  Identities=23%  Similarity=0.309  Sum_probs=64.2

Q ss_pred             ceeEEEeccCC--CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC--CeeEEeccccccc
Q 043346           15 RENLVFEYVNI--NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN--KTVKIAADSGMAK   90 (135)
Q Consensus        15 ~~~lv~e~~~~--~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~--~~~~i~~d~~~~~   90 (135)
                      ..++++|.+++  +|.+++......+......++.++...+.-||..|++|+|+++.||++..+.  ..+.+ +||+.+.
T Consensus        91 ~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~lH~~gi~H~Dl~~~NILv~~~~~~~~~~l-IDld~~~  169 (206)
T PF06293_consen   91 RSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKLHDAGIYHGDLNPSNILVDPDDGQYRFYL-IDLDRMR  169 (206)
T ss_pred             eEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHHHHCcCCCCCCCcccEEEeCCCCceeEEE-Ecchhce
Confidence            45899999954  8999998755577778889999999999999999999999999999999443  25666 6998776


Q ss_pred             cc
Q 043346           91 EI   92 (135)
Q Consensus        91 ~~   92 (135)
                      ..
T Consensus       170 ~~  171 (206)
T PF06293_consen  170 FR  171 (206)
T ss_pred             eC
Confidence            54

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=99.00  E-value=3.8e-09  Score=69.99  Aligned_cols=76  Identities=20%  Similarity=0.265  Sum_probs=62.4

Q ss_pred             ceeEEEeccCC--CHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeec------CCCeeEEec
Q 043346           15 RENLVFEYVNI--NLHKFIQQ--YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI------ENKTVKIAA   84 (135)
Q Consensus        15 ~~~lv~e~~~~--~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~------~~~~~~i~~   84 (135)
                      ..++|+|++++  +|.+++..  ....++.....++.++...+.-||..|++|+|++++||+++.      +...+.+ +
T Consensus       109 ~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~L-I  187 (268)
T PRK15123        109 TSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSV-I  187 (268)
T ss_pred             eeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEE-E
Confidence            47899999965  79998864  234566777899999999999999999999999999999984      1356677 7


Q ss_pred             ccccccc
Q 043346           85 DSGMAKE   91 (135)
Q Consensus        85 d~~~~~~   91 (135)
                      ||+.+..
T Consensus       188 Dl~r~~~  194 (268)
T PRK15123        188 DLHRAQI  194 (268)
T ss_pred             ECCcccc
Confidence            9998754

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.99  E-value=2.6e-09  Score=71.68  Aligned_cols=126  Identities=23%  Similarity=0.326  Sum_probs=90.1

Q ss_pred             cchhhhccceec------ceeEEEeccC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhhC--CcccCCCCCc
Q 043346            3 EMMKSMSLWVHK------RENLVFEYVN-INLHKFIQQ----YHPMDSHLIKKFLYCILSGISYCHAR--KIIHRDLTTM   69 (135)
Q Consensus         3 ~~~~~~~~~~~~------~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lh~~--~i~h~dl~~~   69 (135)
                      |+++.-.+|++.      +..++.||+. |++.+++++    ...+......+|+.||+.|+.|||+.  -++|+++.-+
T Consensus       128 nlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~  207 (458)
T KOG1266|consen  128 NLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCD  207 (458)
T ss_pred             HHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchh
Confidence            567777777554      3568889995 799999986    34677888999999999999999996  5999999999


Q ss_pred             ceeeecCCCeeEEecccccccccCCC-----CCCCCCCcccccccCcccccCCCCCCchhHHHHhhhh
Q 043346           70 NLLADIENKTVKIAADSGMAKEIDAP-----FDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYL  132 (135)
Q Consensus        70 nil~~~~~~~~~i~~d~~~~~~~~~~-----~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~i  132 (135)
                      .+++. .++.+++  +-+........     ........+.++|.+||.-.... ...++|+|++|..
T Consensus       208 tifiq-~ngLIki--g~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn-~~~a~dIy~fgmc  271 (458)
T KOG1266|consen  208 TIFIQ-HNGLIKI--GSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTN-TTGASDIYKFGMC  271 (458)
T ss_pred             heeec-CCceEEe--cccCccccchhhhhhhHhhhhccccCCccccCCcCcccc-cccchhhhhhhHH
Confidence            99999 7788887  33322222111     01222334567888888653333 4557899999954

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.97  E-value=4.4e-09  Score=65.42  Aligned_cols=77  Identities=22%  Similarity=0.313  Sum_probs=60.7

Q ss_pred             ceeEEEeccCC--CHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee--EEeccccc
Q 043346           15 RENLVFEYVNI--NLHKFIQQY--HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV--KIAADSGM   88 (135)
Q Consensus        15 ~~~lv~e~~~~--~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~--~i~~d~~~   88 (135)
                      .-++.||+.+|  ++.+++.+.  ....++....++.++-..+.-||.++++|+||.++||++.+++...  .+ +|||+
T Consensus        84 ~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~l-Idfgl  162 (229)
T KOG3087|consen   84 GGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPIL-IDFGL  162 (229)
T ss_pred             CCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEE-Eeecc
Confidence            56799999976  899998763  2333344478888999999999999999999999999998555443  45 79999


Q ss_pred             cccc
Q 043346           89 AKEI   92 (135)
Q Consensus        89 ~~~~   92 (135)
                      +...
T Consensus       163 s~~s  166 (229)
T KOG3087|consen  163 SSVS  166 (229)
T ss_pred             hhcc
Confidence            8754

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=98.95  E-value=2.9e-09  Score=64.00  Aligned_cols=69  Identities=20%  Similarity=0.218  Sum_probs=55.9

Q ss_pred             cceeEEEeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCCcceeeecCCCeeEEecccccc
Q 043346           14 KRENLVFEYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHAR---KIIHRDLTTMNLLADIENKTVKIAADSGMA   89 (135)
Q Consensus        14 ~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~i~~d~~~~   89 (135)
                      +..++++|++++ .+..+       +......++.++..++..+|..   +++|+|++|+|++++ +.+.+++ .||+.+
T Consensus        66 ~~~~~v~e~~~g~~~~~~-------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~-~~~~~~l-~Df~~~  136 (155)
T cd05120          66 GWSYLLMEWIEGETLDEV-------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVD-DGKILGI-IDWEYA  136 (155)
T ss_pred             CccEEEEEecCCeecccC-------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEE-CCcEEEE-Eecccc
Confidence            368999999965 44432       5566677889999999999984   699999999999999 5678888 799987


Q ss_pred             cc
Q 043346           90 KE   91 (135)
Q Consensus        90 ~~   91 (135)
                      ..
T Consensus       137 ~~  138 (155)
T cd05120         137 GY  138 (155)
T ss_pred             cC
Confidence            64

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.94  E-value=5.6e-09  Score=64.90  Aligned_cols=69  Identities=22%  Similarity=0.301  Sum_probs=53.7

Q ss_pred             cceeEEEeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEeccccccccc
Q 043346           14 KRENLVFEYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEI   92 (135)
Q Consensus        14 ~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~~   92 (135)
                      +...++|||.+| .|.+.+...   .    ..++..+-.-+.-||..|++|+|+.++|+++. ..+ +.+ +|||++...
T Consensus        72 ~~~~I~me~I~G~~lkd~l~~~---~----~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~-~~~-i~~-IDfGLg~~s  141 (204)
T COG3642          72 DNGLIVMEYIEGELLKDALEEA---R----PDLLREVGRLVGKLHKAGIVHGDLTTSNIILS-GGR-IYF-IDFGLGEFS  141 (204)
T ss_pred             CCCEEEEEEeCChhHHHHHHhc---c----hHHHHHHHHHHHHHHhcCeecCCCccceEEEe-CCc-EEE-EECCccccc
Confidence            356799999987 777788764   2    44556666667889999999999999999998 333 666 699999754

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=98.80  E-value=1.6e-08  Score=71.43  Aligned_cols=74  Identities=15%  Similarity=0.182  Sum_probs=55.2

Q ss_pred             ceeEEEeccCC-CHHHHHHhc-CCCCHHHHHHHHHHHHH-HHHHHhhCCcccCCCCCcceeeecCCCeeEEecccccccc
Q 043346           15 RENLVFEYVNI-NLHKFIQQY-HPMDSHLIKKFLYCILS-GISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKE   91 (135)
Q Consensus        15 ~~~lv~e~~~~-~L~~~~~~~-~~~~~~~~~~~~~~i~~-~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~   91 (135)
                      ..+++|||++| +|.+..... ...+   ...++.+++. .+..+|..|++|+|++|.||++. ..+.+++ .|||++..
T Consensus       232 ~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~ql~~~g~~H~D~hPgNilv~-~~g~i~l-iDfG~~~~  306 (437)
T TIGR01982       232 ERVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQVLRDGFFHADLHPGNIFVL-KDGKIIA-LDFGIVGR  306 (437)
T ss_pred             CceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHHHHhCCceeCCCCcccEEEC-CCCcEEE-EeCCCeeE
Confidence            45799999965 887776532 1222   2345555554 46788999999999999999998 6678888 79999977


Q ss_pred             cC
Q 043346           92 ID   93 (135)
Q Consensus        92 ~~   93 (135)
                      ..
T Consensus       307 l~  308 (437)
T TIGR01982       307 LS  308 (437)
T ss_pred             CC
Confidence            64

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=98.78  E-value=7e-08  Score=69.85  Aligned_cols=124  Identities=15%  Similarity=0.224  Sum_probs=85.7

Q ss_pred             ccchhhhccceec-ceeEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHh-hCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCH-ARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh-~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .+|++.++.++.. ..|+|+|.+.+ |..++++   +....+.--+.||+.||.||| +.+++|+++.-+.++++ ..|.
T Consensus        69 P~Il~yL~t~e~~~~~ylvTErV~P-l~~~lk~---l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn-~~Ge  143 (690)
T KOG1243|consen   69 PNILSYLDTTEEEGTLYLVTERVRP-LETVLKE---LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVN-ESGE  143 (690)
T ss_pred             chhhhhhhhhcccCceEEEeecccc-HHHHHHH---hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEc-CCCc
Confidence            4788888888544 89999998853 3333443   225566666899999999997 57999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      -++ .+|..................--.|..|+.+...   .-..|.|-||++++
T Consensus       144 WkL-ggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~s---~~s~D~~~Lg~li~  194 (690)
T KOG1243|consen  144 WKL-GGLELVSKASGFNAPAKSLYLIESFDDPEEIDPS---EWSIDSWGLGCLIE  194 (690)
T ss_pred             EEE-eeeEEEeccccCCcccccchhhhcccChhhcCcc---ccchhhhhHHHHHH
Confidence            888 6888776543332222222223345666654322   13469999999874

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.73  E-value=9.3e-09  Score=64.71  Aligned_cols=76  Identities=29%  Similarity=0.357  Sum_probs=48.7

Q ss_pred             ceeEEEeccC--CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHH-HhhCCcccCCCCCcceeeecCCCeeEEecccccccc
Q 043346           15 RENLVFEYVN--INLHKFIQQYHPMDSHLIKKFLYCILSGISY-CHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKE   91 (135)
Q Consensus        15 ~~~lv~e~~~--~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~-lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~   91 (135)
                      ...+||||++  |.....+.. ..++.+....++.+++..+.. +|+.|++|+|+++.||+++ ++ .+.+ +|||.+..
T Consensus        80 ~~~ivME~I~~~G~~~~~l~~-~~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~-~~-~~~i-IDf~qav~  155 (188)
T PF01163_consen   80 RNVIVMEYIGEDGVPLPRLKD-VDLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVD-DG-KVYI-IDFGQAVD  155 (188)
T ss_dssp             TTEEEEE--EETTEEGGCHHH-CGGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEE-TT-CEEE---GTTEEE
T ss_pred             CCEEEEEecCCCccchhhHHh-ccccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEee-cc-eEEE-EecCccee
Confidence            4679999997  632233333 112244566677788775554 6799999999999999999 43 6777 79998876


Q ss_pred             cCC
Q 043346           92 IDA   94 (135)
Q Consensus        92 ~~~   94 (135)
                      ...
T Consensus       156 ~~~  158 (188)
T PF01163_consen  156 SSH  158 (188)
T ss_dssp             TTS
T ss_pred             cCC
Confidence            543

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>cd05151 ChoK Choline Kinase (ChoK)

Probab=98.71  E-value=3.3e-08  Score=60.98  Aligned_cols=66  Identities=21%  Similarity=0.156  Sum_probs=50.0

Q ss_pred             ceeEEEeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCc-----ccCCCCCcceeeecCCCeeEEeccccc
Q 043346           15 RENLVFEYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKI-----IHRDLTTMNLLADIENKTVKIAADSGM   88 (135)
Q Consensus        15 ~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i-----~h~dl~~~nil~~~~~~~~~i~~d~~~   88 (135)
                      ..++|||+++| ++.+.        .......+.+++.++..||+.++     +|+|++|.||+++ + +.+++ +||+.
T Consensus        65 ~~~lv~e~i~G~~l~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~-~~~~l-iDf~~  133 (170)
T cd05151          65 TGVLITEFIEGSELLTE--------DFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-D-GRLWL-IDWEY  133 (170)
T ss_pred             CCeEEEEecCCCccccc--------cccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-C-CeEEE-Eeccc
Confidence            46899999976 55432        01123456789999999999885     9999999999998 3 56777 79998


Q ss_pred             ccc
Q 043346           89 AKE   91 (135)
Q Consensus        89 ~~~   91 (135)
                      +..
T Consensus       134 a~~  136 (170)
T cd05151         134 AGM  136 (170)
T ss_pred             ccC
Confidence            764

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.68  E-value=7.4e-09  Score=74.94  Aligned_cols=87  Identities=21%  Similarity=0.341  Sum_probs=66.9

Q ss_pred             HHHHHHHHHHHhhC-CcccCCCCCcceeeecCCCeeEEecccccccccCCCCC-------C--CCCCcccccccCccccc
Q 043346           46 LYCILSGISYCHAR-KIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFD-------A--HTTEMVILRYRAPKILF  115 (135)
Q Consensus        46 ~~~i~~~l~~lh~~-~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~~~~~~~-------~--~~~~~~~~~~~ape~~~  115 (135)
                      +.+++.|+.++|.. +++|+++.|++|+++ .++..|+ ++|+.+.....+..       .  .........|.|||.+.
T Consensus       105 l~~v~dgl~flh~sAk~VH~ni~p~~i~~n-a~~~wkl-~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~  182 (700)
T KOG2137|consen  105 LGNVADGLAFLHRSAKVVHGNIQPEAIVVN-ANGDWKL-AGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLL  182 (700)
T ss_pred             hhcccchhhhhccCcceeecccchhheeec-cCcceee-ccchhhhccCCCCccccccCCCCCChhhccCcccccchhhc
Confidence            45667899999975 899999999999999 7788899 79988876554211       1  11122344699999998


Q ss_pred             CCCCCCchhHHHHhhhhhhC
Q 043346          116 GRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus       116 ~~~~~~~~~D~wslg~il~~  135 (135)
                      +.. .++++|++|+|+++|+
T Consensus       183 ~~~-~~~~sd~fSlG~li~~  201 (700)
T KOG2137|consen  183 GTT-NTPASDVFSLGVLIYT  201 (700)
T ss_pred             ccc-ccccccceeeeeEEEE
Confidence            855 7889999999999874

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=98.67  E-value=2.6e-08  Score=73.83  Aligned_cols=69  Identities=19%  Similarity=0.179  Sum_probs=47.3

Q ss_pred             cCCCCCc-ceeeecCCCeeEEecccccccccCCCC--CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           63 HRDLTTM-NLLADIENKTVKIAADSGMAKEIDAPF--DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        63 h~dl~~~-nil~~~~~~~~~i~~d~~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +++..|. |+++. .....+. .+|+.+.......  .......||+.|+|||++.+.. ++.++|+||+||++|
T Consensus       500 ~~~~~p~~~~~~~-p~~~~~~-~~~~~~~~~~~g~~~~~~~~~vGT~~Y~APE~l~~~~-~~~~~DiwSlG~il~  571 (669)
T cd05610         500 TQKPRPHGNLYQT-PKQVKIG-TPYRTPKSVRRGAAPVEGERILGTPDYLAPELLLGKP-HGPAVDWWALGVCLF  571 (669)
T ss_pred             CCCCCCCCceeEC-Ccccccc-ccCCCchhhhcccccccCCceeeCccccCHHHcCCCC-CCcHHHHHHHHHHHH
Confidence            3445555 34444 4344455 6888776543321  2234468899999999998876 788999999999997

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=98.66  E-value=1.9e-08  Score=75.91  Aligned_cols=118  Identities=21%  Similarity=0.217  Sum_probs=89.8

Q ss_pred             cceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEeccccccccc
Q 043346           14 KRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEI   92 (135)
Q Consensus        14 ~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~~   92 (135)
                      ...++++++++ ++|...+..-+..+++-..-....++.+.++||...+.|+|++|.|.+.. ..+..++ .+++.....
T Consensus       877 sP~~L~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~-~~gh~~l-~~~~t~~~v  954 (1205)
T KOG0606|consen  877 SPLPLVGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIA-YDGHRPL-TDFGTLSKV  954 (1205)
T ss_pred             CCcchhhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccchhhcccccccchhhc-ccCCccc-Ccccccccc
Confidence            36789999996 59998888766667667777778889999999999999999999999988 5566666 576522211


Q ss_pred             C------CC-------------------------CCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           93 D------AP-------------------------FDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        93 ~------~~-------------------------~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .      +.                         -.......+|+.|.+||...+.. ..+.+|+|++|++++
T Consensus       955 g~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~-hgs~ad~~~~g~~l~ 1026 (1205)
T KOG0606|consen  955 GLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRR-HGSAADWWSSGVCLF 1026 (1205)
T ss_pred             ccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCccccccc-CCCcchhhhhhhhhh
Confidence            0      00                         00123457889999999999887 677889999999875

>PRK09902 hypothetical protein; Provisional

Probab=98.61  E-value=3.9e-07  Score=58.20  Aligned_cols=78  Identities=17%  Similarity=0.162  Sum_probs=63.1

Q ss_pred             ceeEEEeccC--CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC-eeEEecccccc
Q 043346           15 RENLVFEYVN--INLHKFIQQY--HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK-TVKIAADSGMA   89 (135)
Q Consensus        15 ~~~lv~e~~~--~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~-~~~i~~d~~~~   89 (135)
                      +.++|+|-++  .+|.+.+.++  .+.++.....+..++...+.-||..|+.|+|+.+.||+++..+. .+.+ +||..+
T Consensus        99 rA~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~l-IDlEk~  177 (216)
T PRK09902         99 RALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGF-LDLEKS  177 (216)
T ss_pred             EEEEEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEE-EEhhcc
Confidence            4679999886  4999998763  34577777899999999999999999999999999999983322 3777 699887


Q ss_pred             cccC
Q 043346           90 KEID   93 (135)
Q Consensus        90 ~~~~   93 (135)
                      +...
T Consensus       178 r~~l  181 (216)
T PRK09902        178 RRRL  181 (216)
T ss_pred             chhh
Confidence            6543

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.55  E-value=4.7e-08  Score=69.51  Aligned_cols=122  Identities=16%  Similarity=0.175  Sum_probs=86.2

Q ss_pred             hccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEecc
Q 043346            8 MSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAAD   85 (135)
Q Consensus         8 ~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~~d   85 (135)
                      ...|.+. +.|+--|+|+ +++.....-...+++...+.+..|++.++.++|+...+|+|++|+||++...++..++ .+
T Consensus       332 ~~~W~~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~-~~  410 (524)
T KOG0601|consen  332 NSSWSQLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKL-GD  410 (524)
T ss_pred             CCCccccccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhc-cc
Confidence            3455444 6677788995 4655555434567888899999999999999999999999999999999954466777 68


Q ss_pred             cccccccCCCCCCCCCCccccccc-CcccccCCCCCCchhHHHHhhhhh
Q 043346           86 SGMAKEIDAPFDAHTTEMVILRYR-APKILFGRTNCFAAIDMWAVLYLL  133 (135)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~-ape~~~~~~~~~~~~D~wslg~il  133 (135)
                      ++....+...   ...+.....+. ..|++........++|++|||.-+
T Consensus       411 ~~~~t~~~~~---~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~  456 (524)
T KOG0601|consen  411 FGCWTRLAFS---SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSV  456 (524)
T ss_pred             ccccccccee---cccccccccccccchhhccccccccccccccccccc
Confidence            8887653221   12222333445 256665555477889999998543

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=98.54  E-value=1.6e-07  Score=67.76  Aligned_cols=71  Identities=11%  Similarity=0.193  Sum_probs=48.6

Q ss_pred             ceeEEEeccCC-CHHHH--HHhcC----CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC---CeeEEec
Q 043346           15 RENLVFEYVNI-NLHKF--IQQYH----PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN---KTVKIAA   84 (135)
Q Consensus        15 ~~~lv~e~~~~-~L~~~--~~~~~----~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~---~~~~i~~   84 (135)
                      ..++||||++| .+.+.  +.+.+    .+.+..+..++.|+       ...|++|+|++|.||+++.++   +.+++ .
T Consensus       235 ~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi-------f~~GffHaDpHPGNIlv~~~g~~~~~i~l-l  306 (537)
T PRK04750        235 ETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV-------FRDGFFHADMHPGNIFVSYDPPENPRYIA-L  306 (537)
T ss_pred             CceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH-------HhCCeeeCCCChHHeEEecCCCCCCeEEE-E
Confidence            34599999965 88764  33322    23333344444444       458999999999999998432   27888 6


Q ss_pred             ccccccccC
Q 043346           85 DSGMAKEID   93 (135)
Q Consensus        85 d~~~~~~~~   93 (135)
                      |||+.....
T Consensus       307 DFGivg~l~  315 (537)
T PRK04750        307 DFGIVGSLN  315 (537)
T ss_pred             ecceEEECC
Confidence            999998764

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=98.39  E-value=9.2e-07  Score=56.83  Aligned_cols=66  Identities=21%  Similarity=0.308  Sum_probs=49.1

Q ss_pred             ceeEEEeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEecccccccc
Q 043346           15 RENLVFEYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKE   91 (135)
Q Consensus        15 ~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~   91 (135)
                      ..+++|||++| .|.+...    +++    .+...+..++.-+|+.|+.|+|.+|.|+++. + +.+++ +|++..+.
T Consensus       117 ~~~ll~EYIeG~~l~d~~~----i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~-~-~~i~i-ID~~~k~~  183 (229)
T PF06176_consen  117 SYVLLMEYIEGVELNDIED----IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVS-N-NGIRI-IDTQGKRM  183 (229)
T ss_pred             EEEEEEEEecCeecccchh----cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEE-C-CcEEE-EECccccc
Confidence            45689999977 6654432    222    2446677889999999999999999999988 4 44777 69987654

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.16  E-value=1.2e-05  Score=56.45  Aligned_cols=116  Identities=15%  Similarity=0.171  Sum_probs=85.3

Q ss_pred             eeEEEeccCC--CHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEecccc
Q 043346           16 ENLVFEYVNI--NLHKFIQQ------YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSG   87 (135)
Q Consensus        16 ~~lv~e~~~~--~L~~~~~~------~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~~   87 (135)
                      .-+.|..+.|  .+..++..      ...+..+..++.++.++.+..-||..|-.-+|++++|++++ +...+.+ .|-.
T Consensus        85 iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVs-d~~~V~L-VdsD  162 (637)
T COG4248          85 IGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVS-DDSKVVL-VDSD  162 (637)
T ss_pred             eEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeee-cCceEEE-Eccc
Confidence            5577777743  56666542      23467888999999999999999999999999999999999 6677776 3533


Q ss_pred             cccccCCCCCCCCCCcccccccCcccccC----CCCCCchhHHHHhhhhhh
Q 043346           88 MAKEIDAPFDAHTTEMVILRYRAPKILFG----RTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~ape~~~~----~~~~~~~~D~wslg~il~  134 (135)
                      .-. +..+.....+.++.+.|.+||...-    +...+...|.|.||+++|
T Consensus       163 sfq-i~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF  212 (637)
T COG4248         163 SFQ-INANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIF  212 (637)
T ss_pred             cee-eccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHH
Confidence            222 2244455667788999999998741    112455679999999987

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=98.12  E-value=5.5e-06  Score=54.78  Aligned_cols=75  Identities=27%  Similarity=0.389  Sum_probs=54.9

Q ss_pred             ecceeEEEeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEecccccccc
Q 043346           13 HKRENLVFEYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKE   91 (135)
Q Consensus        13 ~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~   91 (135)
                      .++..+|||+.+| -|.. +    +++......++..|+.-+.-.-..|++|+|+++-||+++ +++.+.+ +||-.+..
T Consensus       179 ~nRHaVvMe~ieG~eL~~-~----r~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~-~dg~~~v-IDwPQ~v~  251 (304)
T COG0478         179 WNRHAVVMEYIEGVELYR-L----RLDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVT-EDGDIVV-IDWPQAVP  251 (304)
T ss_pred             cccceeeeehcccceeec-c----cCcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEe-cCCCEEE-EeCccccc
Confidence            3467899999987 3322 1    223455666777788777877799999999999999999 5666777 69887765


Q ss_pred             cCC
Q 043346           92 IDA   94 (135)
Q Consensus        92 ~~~   94 (135)
                      ...
T Consensus       252 ~~h  254 (304)
T COG0478         252 ISH  254 (304)
T ss_pred             CCC
Confidence            443

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=98.01  E-value=1.5e-05  Score=51.07  Aligned_cols=31  Identities=23%  Similarity=0.313  Sum_probs=23.7

Q ss_pred             CCcccCCCCCcceeeecC-CCeeEEeccccccc
Q 043346           59 RKIIHRDLTTMNLLADIE-NKTVKIAADSGMAK   90 (135)
Q Consensus        59 ~~i~h~dl~~~nil~~~~-~~~~~i~~d~~~~~   90 (135)
                      ..++|+|+.+.|++++.+ .+.+.+ +||+.+.
T Consensus       174 ~~l~HgD~~~~Nil~~~~~~~~~~i-ID~e~~~  205 (223)
T cd05154         174 PGLVHGDYRLGNVLFHPDEPRVVAV-LDWELAT  205 (223)
T ss_pred             cEEEECCCCcccEEEcCCCCcEEEE-Eeccccc
Confidence            457899999999999842 455667 6998765

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=97.94  E-value=0.00011  Score=52.84  Aligned_cols=86  Identities=10%  Similarity=0.222  Sum_probs=66.5

Q ss_pred             cchhhhccce-----ecceeEEEeccC--CCHHHHHHh---------------cCCCCHHHHHHHHHHHHHHHHHHhhCC
Q 043346            3 EMMKSMSLWV-----HKRENLVFEYVN--INLHKFIQQ---------------YHPMDSHLIKKFLYCILSGISYCHARK   60 (135)
Q Consensus         3 ~~~~~~~~~~-----~~~~~lv~e~~~--~~L~~~~~~---------------~~~~~~~~~~~~~~~i~~~l~~lh~~~   60 (135)
                      |+|++.+.+.     +....+|++|..  ++|.++.-.               +.+.++..++.++.|+..||..+|+.|
T Consensus       334 NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssG  413 (655)
T KOG3741|consen  334 NVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSG  413 (655)
T ss_pred             ceeehhhhhhhhccCcceEEEEEecCCCCchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcC
Confidence            5666666653     336889999984  588886632               225678999999999999999999999


Q ss_pred             cccCCCCCcceeeecCCCeeEEeccccccc
Q 043346           61 IIHRDLTTMNLLADIENKTVKIAADSGMAK   90 (135)
Q Consensus        61 i~h~dl~~~nil~~~~~~~~~i~~d~~~~~   90 (135)
                      +..+-+.+++|++. ...++++ ...|...
T Consensus       414 LAck~L~~~kIlv~-G~~RIri-S~C~i~D  441 (655)
T KOG3741|consen  414 LACKTLDLKKILVT-GKMRIRI-SGCGIMD  441 (655)
T ss_pred             ceeecccHhHeEee-CcceEEE-eccccee
Confidence            99999999999999 4446777 4555443

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=97.76  E-value=8.2e-05  Score=48.78  Aligned_cols=77  Identities=19%  Similarity=0.290  Sum_probs=55.3

Q ss_pred             ceeEEEeccCCC--HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhh-CCcccCCCCCcceeeecCCCeeEEecccccccc
Q 043346           15 RENLVFEYVNIN--LHKFIQQYHPMDSHLIKKFLYCILSGISYCHA-RKIIHRDLTTMNLLADIENKTVKIAADSGMAKE   91 (135)
Q Consensus        15 ~~~lv~e~~~~~--L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~   91 (135)
                      +..++||+++..  -.-.++. -+..+.+...+..+++..+.-|-. .+++|+||+.-||++. + +.+.+ +|++.+..
T Consensus       140 ~nVLvMEfIg~~g~pAP~LkD-v~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~-~-~~p~i-ID~~QaV~  215 (268)
T COG1718         140 NNVLVMEFIGDDGLPAPRLKD-VPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH-D-GEPYI-IDVSQAVT  215 (268)
T ss_pred             CCeEEEEeccCCCCCCCCccc-CCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEE-C-CeEEE-EECccccc
Confidence            456999999633  1111111 233344677888899999988887 8999999999999999 4 56666 69998876


Q ss_pred             cCCC
Q 043346           92 IDAP   95 (135)
Q Consensus        92 ~~~~   95 (135)
                      ...|
T Consensus       216 ~~hp  219 (268)
T COG1718         216 IDHP  219 (268)
T ss_pred             cCCC
Confidence            6544

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=97.03  E-value=0.0041  Score=45.30  Aligned_cols=75  Identities=16%  Similarity=0.267  Sum_probs=50.4

Q ss_pred             ceeEEEeccCC-CHHHHH--HhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEecccccccc
Q 043346           15 RENLVFEYVNI-NLHKFI--QQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKE   91 (135)
Q Consensus        15 ~~~lv~e~~~~-~L~~~~--~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~   91 (135)
                      .-.++|||++| .+.+..  ++ .+.+...+.....++  -++.+-..|..|.|..|.|+++. ..+.+.. .|||+...
T Consensus       240 ~~VLtmE~i~Gi~i~d~~~l~~-~g~d~k~ia~~~~~~--f~~q~~~dgffHaDpHpGNi~v~-~~g~i~~-lDfGi~g~  314 (517)
T COG0661         240 RRVLTMEWIDGIKISDIAALKS-AGIDRKELAELLVRA--FLRQLLRDGFFHADPHPGNILVR-SDGRIVL-LDFGIVGR  314 (517)
T ss_pred             CcEEEEEeeCCEecccHHHHHh-cCCCHHHHHHHHHHH--HHHHHHhcCccccCCCccceEEe-cCCcEEE-EcCcceec
Confidence            56799999977 777764  34 445533332222222  13444458999999999999999 4466666 59999877


Q ss_pred             cCC
Q 043346           92 IDA   94 (135)
Q Consensus        92 ~~~   94 (135)
                      +..
T Consensus       315 l~~  317 (517)
T COG0661         315 LDP  317 (517)
T ss_pred             CCH
Confidence            643

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=96.95  E-value=0.0081  Score=43.90  Aligned_cols=76  Identities=21%  Similarity=0.230  Sum_probs=49.6

Q ss_pred             ceeEEEeccCC---CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecC---CCeeEEeccccc
Q 043346           15 RENLVFEYVNI---NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE---NKTVKIAADSGM   88 (135)
Q Consensus        15 ~~~lv~e~~~~---~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~---~~~~~i~~d~~~   88 (135)
                      .-.|+|||++|   +=.+.+++ .+.+...+..-+.+...  +-+-..|.+|.|-.|.||++..+   ...+.+ .|+|+
T Consensus       276 ~RVLtME~~~G~~i~Dl~~i~~-~gi~~~~i~~~l~~~~~--~qIf~~GffHaDPHPGNilv~~~~~~~~~ivl-lDhGl  351 (538)
T KOG1235|consen  276 KRVLTMEYVDGIKINDLDAIDK-RGISPHDILNKLVEAYL--EQIFKTGFFHADPHPGNILVRPNPEGDEEIVL-LDHGL  351 (538)
T ss_pred             ceEEEEEecCCccCCCHHHHHH-cCCCHHHHHHHHHHHHH--HHHHhcCCccCCCCCCcEEEecCCCCCccEEE-Ecccc
Confidence            56799999964   33355665 34555544443333322  23334679999999999999942   456666 59999


Q ss_pred             ccccCC
Q 043346           89 AKEIDA   94 (135)
Q Consensus        89 ~~~~~~   94 (135)
                      ......
T Consensus       352 ~~~is~  357 (538)
T KOG1235|consen  352 YAVISH  357 (538)
T ss_pred             cccccH
Confidence            876643

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=96.83  E-value=0.0036  Score=39.60  Aligned_cols=74  Identities=16%  Similarity=0.075  Sum_probs=55.4

Q ss_pred             eeEEEeccC-CCHHH---HHHhcCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCCcceeeecCCCeeEEeccccc
Q 043346           16 ENLVFEYVN-INLHK---FIQQYHPMDSHLIKKFLYCILSGISYCHA---RKIIHRDLTTMNLLADIENKTVKIAADSGM   88 (135)
Q Consensus        16 ~~lv~e~~~-~~L~~---~~~~~~~~~~~~~~~~~~~i~~~l~~lh~---~~i~h~dl~~~nil~~~~~~~~~i~~d~~~   88 (135)
                      .+++.|+.+ +++..   .+.+.-..+++...+++.+++..+.+++.   ..+.-.|++++|+.++ +++.+++ +|...
T Consensus        31 ~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~~~lcDv~~~nfgv~-~~~~lk~-iDld~  108 (188)
T PF12260_consen   31 RFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGFFYLCDVSPDNFGVN-DDGRLKL-IDLDD  108 (188)
T ss_pred             CEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCcEEEeecchHHeEEe-CCCcEEE-Eechh
Confidence            467889986 34432   12222345788999999999999999987   4567799999999999 6678898 68876


Q ss_pred             ccc
Q 043346           89 AKE   91 (135)
Q Consensus        89 ~~~   91 (135)
                      ...
T Consensus       109 v~~  111 (188)
T PF12260_consen  109 VFV  111 (188)
T ss_pred             cch
Confidence            543

Proteins in this uncharacterised family are described as transmembrane proteins.

>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]

Probab=96.53  E-value=0.0065  Score=42.67  Aligned_cols=90  Identities=16%  Similarity=0.210  Sum_probs=62.7

Q ss_pred             Cccchhhhccceec-------ceeEEEeccCCC--HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhh-CCcccCCCCCcc
Q 043346            1 MQEMMKSMSLWVHK-------RENLVFEYVNIN--LHKFIQQYHPMDSHLIKKFLYCILSGISYCHA-RKIIHRDLTTMN   70 (135)
Q Consensus         1 ~~~~~~~~~~~~~~-------~~~lv~e~~~~~--L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~~~n   70 (135)
                      |||+.++.....+-       ...|||++++.+  -.-.++ .-.++...+..+-.|++.-+.-|.. ++++|.||+--|
T Consensus       217 ~RNLkRl~~aGIP~PePIlLk~hVLVM~FlGrdgw~aPkLK-d~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN  295 (520)
T KOG2270|consen  217 MRNLKRLNNAGIPCPEPILLKNHVLVMEFLGRDGWAAPKLK-DASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFN  295 (520)
T ss_pred             HHHHHHHHhcCCCCCCceeeecceEeeeeccCCCCcCcccc-cccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhh
Confidence            56777776666331       457999999643  222222 2356677788888888888887765 799999999999


Q ss_pred             eeeecCCCeeEEecccccccccCC
Q 043346           71 LLADIENKTVKIAADSGMAKEIDA   94 (135)
Q Consensus        71 il~~~~~~~~~i~~d~~~~~~~~~   94 (135)
                      +++.  .|.+.+ +|.+.+.....
T Consensus       296 ~Lyh--dG~lyi-IDVSQSVE~DH  316 (520)
T KOG2270|consen  296 LLYH--DGKLYI-IDVSQSVEHDH  316 (520)
T ss_pred             heEE--CCEEEE-EEccccccCCC
Confidence            9988  366677 68877765443

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=96.44  E-value=0.0008  Score=49.77  Aligned_cols=111  Identities=14%  Similarity=0.073  Sum_probs=72.7

Q ss_pred             eecceeEEEeccCCC--HHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEeccccc
Q 043346           12 VHKRENLVFEYVNIN--LHKFI-QQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGM   88 (135)
Q Consensus        12 ~~~~~~lv~e~~~~~--L~~~~-~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~   88 (135)
                      .+...++.++++++.  -..-. .....+..-.+....+.-..+++++|+.-=+|+|    ||+..  +...+. .+++.
T Consensus       305 ~E~~~~i~~~i~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s--~~~~~~-~~~~v  377 (829)
T KOG0576|consen  305 GEDYLWIPMRICSTGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILGS--EEEVKL-LDFAV  377 (829)
T ss_pred             cccccchhhhhhcCCccccccCChhhHhhhhhhhhhhhhhhcccccccccccccCcc----ccccc--cccccc-ccccC
Confidence            344677888888532  11111 0111233444555566667788889987667877    66655  355666 68888


Q ss_pred             ccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhh
Q 043346           89 AKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLY  131 (135)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~  131 (135)
                      ...+.... ...++.+++.++|||+..+.. +....|.|++++
T Consensus       378 ~~~L~~~~-~~~t~~~~~~~~~pev~~~~~-~~~~p~~~~~~~  418 (829)
T KOG0576|consen  378 PPQLTRTM-KPRTAIGTPEPLAPEVIQENT-IDGCPDSGSLAV  418 (829)
T ss_pred             CcccCccc-ccccCCCCCCCCCchhhcccc-cccCCCccCCCc
Confidence            77665543 456778999999999987776 566779999885

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=95.54  E-value=0.076  Score=42.39  Aligned_cols=111  Identities=19%  Similarity=0.224  Sum_probs=66.7

Q ss_pred             EeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCc---ceeeecCCCeeEEec--ccccccccC
Q 043346           20 FEYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTM---NLLADIENKTVKIAA--DSGMAKEID   93 (135)
Q Consensus        20 ~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~---nil~~~~~~~~~i~~--d~~~~~~~~   93 (135)
                      .+++.+ ++.+.+..-+..+......+..+.++|+.++|+....|.-+..+   +.-.+ ..+...+ .  ++.......
T Consensus       265 ~~~~s~~~~~~~~q~v~~i~~~~~r~~~~~~~~GL~~~h~~~l~~v~L~~s~~~~~~~~-~e~~~~~-sl~~~~ss~~l~  342 (1351)
T KOG1035|consen  265 QEICSKVELRSLLQSVGSIPLETLRILHQKLLEGLAYLHSLSLEHVVLSASSSKESTVD-GEGVVAI-SLSDFDSSKPLP  342 (1351)
T ss_pred             HhhcCccchHHHHhhccccCHHHHHHHHHHHhhhHHHHHHhccceeEEecccccccccC-ccceeec-chhhhcccccCC
Confidence            355654 77777777778889999999999999999999986655544443   11112 1122333 2  555554443


Q ss_pred             CCCCCCCCCcccccccCcccccCCCC-CCchhHHHHhhhhh
Q 043346           94 APFDAHTTEMVILRYRAPKILFGRTN-CFAAIDMWAVLYLL  133 (135)
Q Consensus        94 ~~~~~~~~~~~~~~~~ape~~~~~~~-~~~~~D~wslg~il  133 (135)
                      .... ......+..+.++|....... .....|+|.+|...
T Consensus       343 d~~~-~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~  382 (1351)
T KOG1035|consen  343 DNEK-SFSDLLAEIRNADEDLKENTAKKSRLTDLWCLGLLL  382 (1351)
T ss_pred             Cccc-chhhcCccccccccccccccchhhhhhHHHHHHHHH
Confidence            3321 222233445667777755441 23346999999764

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=95.14  E-value=0.23  Score=31.80  Aligned_cols=59  Identities=19%  Similarity=0.296  Sum_probs=41.2

Q ss_pred             ecceeEEEecc-C------CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecC
Q 043346           13 HKRENLVFEYV-N------INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE   76 (135)
Q Consensus        13 ~~~~~lv~e~~-~------~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~   76 (135)
                      +...-+|+|.. +      .+|.+++++ +.+++ .....+.   .-.++|-+.+|+.+|++|.||++...
T Consensus        89 ~~G~Glv~e~I~d~dG~~s~TL~~~l~~-~~~~~-~~~~~L~---~f~~~l~~~~Iv~~dl~~~NIv~~~~  154 (199)
T PF10707_consen   89 NLGLGLVVELIRDADGNISPTLEDYLKE-GGLTE-ELRQALD---EFKRYLLDHHIVIRDLNPHNIVVQRR  154 (199)
T ss_pred             CCceEEEEEEEECCCCCcCccHHHHHHc-CCccH-HHHHHHH---HHHHHHHHcCCeecCCCcccEEEEec
Confidence            33567888876 2      378888866 45665 3333333   34567888999999999999999743

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=94.99  E-value=0.022  Score=39.52  Aligned_cols=72  Identities=18%  Similarity=0.260  Sum_probs=49.3

Q ss_pred             ecceeEEEeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEecccccccc
Q 043346           13 HKRENLVFEYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKE   91 (135)
Q Consensus        13 ~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~   91 (135)
                      .++.+.|||.++| .|.+.-+-   .+   ...+...+..-+.-|...|++|+|.+--||++. +.+.+++ +||-....
T Consensus       180 ~~RH~Vvmelv~g~Pl~~v~~v---~d---~~~ly~~lm~~Iv~la~~GlIHgDFNEFNimv~-dd~~i~v-IDFPQmvS  251 (465)
T KOG2268|consen  180 HNRHCVVMELVDGYPLRQVRHV---ED---PPTLYDDLMGLIVRLANHGLIHGDFNEFNIMVK-DDDKIVV-IDFPQMVS  251 (465)
T ss_pred             ccceeeHHHhhcccceeeeeec---CC---hHHHHHHHHHHHHHHHHcCceecccchheeEEe-cCCCEEE-eechHhhc
Confidence            3467888998865 55443221   12   223345555666778889999999999999999 6666777 69876654


Q ss_pred             c
Q 043346           92 I   92 (135)
Q Consensus        92 ~   92 (135)
                      .
T Consensus       252 ~  252 (465)
T KOG2268|consen  252 T  252 (465)
T ss_pred             c
Confidence            4

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=94.97  E-value=0.097  Score=36.98  Aligned_cols=73  Identities=19%  Similarity=0.199  Sum_probs=52.2

Q ss_pred             ceeEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhC-CcccCCCCCcceeeecCCCeeEEecccccccccC
Q 043346           15 RENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHAR-KIIHRDLTTMNLLADIENKTVKIAADSGMAKEID   93 (135)
Q Consensus        15 ~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~~~   93 (135)
                      ..|++|++-++++...    .....+++..++.+.+..+.-+..+ ..-||++.-.||+++  .|.+.+ +||.+++...
T Consensus       300 y~yl~~kdhgt~is~i----k~~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId--~GnvtL-IDfklsRl~~  372 (488)
T COG5072         300 YLYLHFKDHGTPISII----KADRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID--EGNVTL-IDFKLSRLSY  372 (488)
T ss_pred             EEEEEEecCCceeeee----ecccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee--cCceEE-EEeeeeeccc
Confidence            5567777766554321    1234667777877777766666654 678999999999999  578888 7999998543


Q ss_pred             C
Q 043346           94 A   94 (135)
Q Consensus        94 ~   94 (135)
                      +
T Consensus       373 ~  373 (488)
T COG5072         373 S  373 (488)
T ss_pred             C
Confidence            3

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=94.90  E-value=0.082  Score=35.96  Aligned_cols=30  Identities=33%  Similarity=0.355  Sum_probs=24.5

Q ss_pred             CCcccCCCCCcceeeecCCCeeEEeccccccc
Q 043346           59 RKIIHRDLTTMNLLADIENKTVKIAADSGMAK   90 (135)
Q Consensus        59 ~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~   90 (135)
                      .+++|+|+.+.|++++ +++...+ +||+.+.
T Consensus       187 ~~l~HgD~~~~Nvl~~-~~~~~~v-IDfd~~~  216 (307)
T TIGR00938       187 RGVIHADLFPDNVLFD-GDSVKGV-IDFYFAC  216 (307)
T ss_pred             CccCCCCCCcCcEEEE-CCceEEE-eeccccc
Confidence            6899999999999998 4454556 6998874

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>PRK05231 homoserine kinase; Provisional

Probab=94.89  E-value=0.029  Score=38.28  Aligned_cols=31  Identities=29%  Similarity=0.327  Sum_probs=24.4

Q ss_pred             CCcccCCCCCcceeeecCCCeeEEecccccccc
Q 043346           59 RKIIHRDLTTMNLLADIENKTVKIAADSGMAKE   91 (135)
Q Consensus        59 ~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~   91 (135)
                      .+++|+|+.+.|++++ ++...-+ +||+.+..
T Consensus       187 ~~liHgD~~~~Nil~~-~~~~~~i-IDf~~~~~  217 (319)
T PRK05231        187 RGVIHADLFRDNVLFE-GDRLSGF-IDFYFACN  217 (319)
T ss_pred             cccCCCCCCCCcEEEE-CCceEEE-EecccccC
Confidence            4899999999999998 4444456 69988753

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=94.83  E-value=0.055  Score=35.12  Aligned_cols=32  Identities=28%  Similarity=0.294  Sum_probs=25.4

Q ss_pred             CCcccCCCCCcceeeecCCCeeEEecccccccc
Q 043346           59 RKIIHRDLTTMNLLADIENKTVKIAADSGMAKE   91 (135)
Q Consensus        59 ~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~   91 (135)
                      ..++|+|+.+.||+++...+.+.+ +||..+..
T Consensus       170 ~~l~H~Dl~~~Nil~~~~~~~~~l-IDwe~a~~  201 (235)
T cd05157         170 IVFCHNDLLSGNIIYNEEKNSVKF-IDYEYAGY  201 (235)
T ss_pred             EEEEcCCCCcCcEEEeCCCCCEEE-EEcccCCc
Confidence            468999999999999942456777 69987764

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=94.73  E-value=0.061  Score=35.07  Aligned_cols=31  Identities=26%  Similarity=0.314  Sum_probs=24.0

Q ss_pred             CCcccCCCCCcceeeecCCCeeEEecccccccc
Q 043346           59 RKIIHRDLTTMNLLADIENKTVKIAADSGMAKE   91 (135)
Q Consensus        59 ~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~   91 (135)
                      .+++|+|+.+.|++++ +.+..-+ +||+.+..
T Consensus       164 ~~l~HGD~~~~Nvlv~-~~~i~gi-IDw~~a~~  194 (235)
T cd05155         164 PVWFHGDLAPGNLLVQ-DGRLSAV-IDFGCLGV  194 (235)
T ss_pred             ceEEeCCCCCCcEEEE-CCCEEEE-EeCcccCc
Confidence            4589999999999998 4444446 69997653

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]

Probab=94.71  E-value=0.0048  Score=50.46  Aligned_cols=117  Identities=15%  Similarity=0.012  Sum_probs=79.5

Q ss_pred             ceeEEEecc-CCCHHHHHHhcC---CCCHHHHHHHHHHH-HHHHHHHhhC-----CcccCCCCCcceeeecCCCeeEEec
Q 043346           15 RENLVFEYV-NINLHKFIQQYH---PMDSHLIKKFLYCI-LSGISYCHAR-----KIIHRDLTTMNLLADIENKTVKIAA   84 (135)
Q Consensus        15 ~~~lv~e~~-~~~L~~~~~~~~---~~~~~~~~~~~~~i-~~~l~~lh~~-----~i~h~dl~~~nil~~~~~~~~~i~~   84 (135)
                      ..|..++++ .|++.+.+.++.   +.-.+.......++ +....-+|++     -.+|+++++-|.++. .+..++. .
T Consensus      1305 ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~tnlg~T~v~~~Lkf~lpmIV-tny~v~~-g 1382 (2724)
T KOG1826|consen 1305 EEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLTNLGNTNVSKSLKFTLPMIV-TNYNVKL-G 1382 (2724)
T ss_pred             HHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcccCCccchhhhhhhhcccee-cCCcccc-c
Confidence            345667777 357777776521   22233344444555 6777777753     367899999999998 6778888 7


Q ss_pred             ccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           85 DSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        85 d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ++|+.+.............+++.|++|++...-. .+.++|+|..|+-+|
T Consensus      1383 k~gLdKIknp~~sf~Gl~l~sp~~v~qli~N~ik-~t~rsdilr~s~~ly 1431 (2724)
T KOG1826|consen 1383 KGGLDKIKNPVLSFFGLELCSPIYVLQLIKNEIK-FTKRSDILRRSLSLY 1431 (2724)
T ss_pred             ccccccccCchHhhhhhhhCCHHHHHHHHHHHHh-hhhHHHHHHHHHHHH
Confidence            9999884444445566677788888888775544 555589999877665

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=94.60  E-value=0.056  Score=34.65  Aligned_cols=32  Identities=31%  Similarity=0.297  Sum_probs=20.7

Q ss_pred             CCcccCCCCCcceeeecCCCeeEEecccccccc
Q 043346           59 RKIIHRDLTTMNLLADIENKTVKIAADSGMAKE   91 (135)
Q Consensus        59 ~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~   91 (135)
                      ..++|+|+.|.||+++.+++.+-+ +||+.+..
T Consensus       166 ~~~~HgD~~~~Nil~~~~~~~i~i-ID~e~a~~  197 (239)
T PF01636_consen  166 PVLIHGDLHPGNILVDPSDGRIGI-IDFEDAGW  197 (239)
T ss_dssp             EEEE-SS-SGGGEEEESSTTEEEE---GTT-EE
T ss_pred             cEEEEeccccccceeeeccceeEE-EecccceE
Confidence            569999999999999944455556 69987653

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=94.51  E-value=0.12  Score=34.96  Aligned_cols=29  Identities=24%  Similarity=0.374  Sum_probs=23.2

Q ss_pred             CCcccCCCCCcceeeecCCCeeEEeccccccc
Q 043346           59 RKIIHRDLTTMNLLADIENKTVKIAADSGMAK   90 (135)
Q Consensus        59 ~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~   90 (135)
                      .+++|+|+.+.|++++ . +.+.+ +||+.+.
T Consensus       187 ~~liHgD~~~~Nil~~-~-~~i~l-IDfd~~~  215 (313)
T TIGR02906       187 RGFCHQDYAYHNILLK-D-NEVYV-IDFDYCT  215 (313)
T ss_pred             CceEcCCCCcccEEEe-C-CcEEE-EECcccc
Confidence            5789999999999998 4 44566 6998664

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=94.29  E-value=0.13  Score=34.73  Aligned_cols=31  Identities=32%  Similarity=0.344  Sum_probs=24.6

Q ss_pred             CCcccCCCCCcceeeecCCCeeEEecccccccc
Q 043346           59 RKIIHRDLTTMNLLADIENKTVKIAADSGMAKE   91 (135)
Q Consensus        59 ~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~   91 (135)
                      .+++|+|+.|.|++++ +.+...+ +||+.+..
T Consensus       175 ~~l~HgD~~~~Nil~~-~~~~~~i-IDfe~a~~  205 (296)
T cd05153         175 RGVIHADLFRDNVLFD-GDELSGV-IDFYFACT  205 (296)
T ss_pred             CcCCccCcCcccEEEe-CCceEEE-eehhhhcC
Confidence            4799999999999999 4455556 69987753

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=93.90  E-value=0.14  Score=34.63  Aligned_cols=33  Identities=24%  Similarity=0.138  Sum_probs=26.0

Q ss_pred             CCcccCCCCCcceeeecC---CCeeEEeccccccccc
Q 043346           59 RKIIHRDLTTMNLLADIE---NKTVKIAADSGMAKEI   92 (135)
Q Consensus        59 ~~i~h~dl~~~nil~~~~---~~~~~i~~d~~~~~~~   92 (135)
                      ..++|+|+.+.||+++.+   .+.+.+ +||..+..-
T Consensus       179 ~~lcH~Dl~~~Nil~~~~~~~~~~i~l-IDwEya~~~  214 (302)
T cd05156         179 VVFCHNDLQEGNILLLNPSSETKKLVL-IDFEYASYN  214 (302)
T ss_pred             ceEEecCCCcCeEEecCCCCCCCcEEE-EeeCCCCCC
Confidence            468999999999999832   366777 799888643

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=93.60  E-value=0.09  Score=34.39  Aligned_cols=30  Identities=23%  Similarity=0.238  Sum_probs=24.2

Q ss_pred             CCcccCCCCCcceeeecCCCeeEEeccccccc
Q 043346           59 RKIIHRDLTTMNLLADIENKTVKIAADSGMAK   90 (135)
Q Consensus        59 ~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~   90 (135)
                      ..++|+|+.|.|++++ +.+...+ +||+.+.
T Consensus       163 ~~l~HgD~~~~Nil~~-~~~~~~i-IDwe~a~  192 (244)
T cd05150         163 LVVTHGDACLPNIIVD-PGKFSGF-IDLGRLG  192 (244)
T ss_pred             eEEECCCCCCccEEEe-CCcEEEE-EEccccc
Confidence            4589999999999999 4455567 6998775

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>PLN02236 choline kinase

Probab=93.40  E-value=0.18  Score=35.06  Aligned_cols=33  Identities=27%  Similarity=0.296  Sum_probs=26.2

Q ss_pred             CCcccCCCCCcceeeecCCCeeEEeccccccccc
Q 043346           59 RKIIHRDLTTMNLLADIENKTVKIAADSGMAKEI   92 (135)
Q Consensus        59 ~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~~   92 (135)
                      ..++|+|+++.||+++.+.+.+.+ +||..+...
T Consensus       200 ~~~cH~Dl~~~Nil~~~~~~~~~l-ID~Eya~~~  232 (344)
T PLN02236        200 IGFCHNDLQYGNIMIDEETRAITI-IDYEYASYN  232 (344)
T ss_pred             ceEEeCCCCcCcEEEeCCCCcEEE-Eeehhcccc
Confidence            368999999999999844566788 699887643

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=92.92  E-value=0.24  Score=34.35  Aligned_cols=30  Identities=33%  Similarity=0.292  Sum_probs=23.3

Q ss_pred             cccCCCCCcceeeecCCCeeEEecccccccc
Q 043346           61 IIHRDLTTMNLLADIENKTVKIAADSGMAKE   91 (135)
Q Consensus        61 i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~   91 (135)
                      ++|+|+.|.|++++.++...-+ +||+.+..
T Consensus       199 iIH~D~~~~NVl~d~~~~~~g~-iDFdDa~~  228 (331)
T COG2334         199 IIHGDLHPDNVLFDDDTDVSGF-IDFDDAGY  228 (331)
T ss_pred             eeecCCCccceeEcCCCCeeeE-EEcccccc
Confidence            9999999999999944333455 69988753

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=92.76  E-value=0.33  Score=31.07  Aligned_cols=32  Identities=28%  Similarity=0.289  Sum_probs=21.0

Q ss_pred             CCcccCCCCCcceeeecCCCeeEEecccccccc
Q 043346           59 RKIIHRDLTTMNLLADIENKTVKIAADSGMAKE   91 (135)
Q Consensus        59 ~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~   91 (135)
                      ..++|+|+.+.||+++...+.+++ +||..+..
T Consensus       143 ~v~cHnDl~~~Nil~~~~~~~~~l-IDfEya~~  174 (211)
T PF01633_consen  143 LVFCHNDLNPGNILINNKDGEVKL-IDFEYAGY  174 (211)
T ss_dssp             EEEE-S--SGGGEEETSSSSCEEE---GTT-EE
T ss_pred             ceEeeccCccccEEeccCCCeEEE-ecHHHHhh
Confidence            468899999999999436788888 79988764

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]

Probab=92.69  E-value=0.32  Score=32.67  Aligned_cols=49  Identities=22%  Similarity=0.177  Sum_probs=34.3

Q ss_pred             HHHHHHHHHHHHHHHHhhC--CcccCCCCCcceeeecCCCeeEEecccccccc
Q 043346           41 LIKKFLYCILSGISYCHAR--KIIHRDLTTMNLLADIENKTVKIAADSGMAKE   91 (135)
Q Consensus        41 ~~~~~~~~i~~~l~~lh~~--~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~   91 (135)
                      .+...+..+-.++.-.+..  -++|.|+.|.|++.+ +.+.+.+ +||.-+..
T Consensus       133 ~~~~~~~~l~~~l~~~~~~~~v~cH~Dl~~~N~l~t-~~~~l~L-IDWEyAg~  183 (269)
T COG0510         133 LLRKKLKELRRALEEVPKDDLVPCHNDLNPGNLLLT-DKGGLFL-IDWEYAGL  183 (269)
T ss_pred             HHHHHHHHHHHHhhhcCCCceeeecCCCCccceEEc-CCCcEEE-EecccCCC
Confidence            3444445555555555544  689999999999999 5577888 69987653

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=92.36  E-value=0.11  Score=33.90  Aligned_cols=29  Identities=21%  Similarity=0.208  Sum_probs=23.3

Q ss_pred             CCcccCCCCCcceeeecCCCeeEEeccccccc
Q 043346           59 RKIIHRDLTTMNLLADIENKTVKIAADSGMAK   90 (135)
Q Consensus        59 ~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~   90 (135)
                      ..++|+|+.|.|++++ +.+ ..+ +||+.+.
T Consensus       153 ~~~~HgD~~~~Nii~~-~~~-~~i-IDwe~a~  181 (226)
T TIGR02172       153 STCLHGDFQIGNLITS-GKG-TYW-IDLGDFG  181 (226)
T ss_pred             CceEecCCCCCcEEEc-CCC-cEE-EechhcC
Confidence            3578999999999998 445 667 6998775

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>TIGR02721 ycfN_thiK thiamine kinase

Probab=92.13  E-value=0.13  Score=34.00  Aligned_cols=29  Identities=24%  Similarity=0.370  Sum_probs=23.3

Q ss_pred             CcccCCCCCcceeeecCCCeeEEecccccccc
Q 043346           60 KIIHRDLTTMNLLADIENKTVKIAADSGMAKE   91 (135)
Q Consensus        60 ~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~   91 (135)
                      .++|+|+.|.|++++ +.+ +.+ +||+.+..
T Consensus       147 ~l~H~Dl~~~Nil~~-~~~-~~l-IDwE~a~~  175 (256)
T TIGR02721       147 APLHMDVHAYNLVVT-PQG-LKL-IDWEYASD  175 (256)
T ss_pred             eeecCCCCcCcEEEe-CCC-CEE-EeccccCc
Confidence            589999999999998 444 566 69987754

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>PHA03111 Ser/Thr kinase; Provisional

Probab=91.90  E-value=0.38  Score=33.68  Aligned_cols=38  Identities=21%  Similarity=0.079  Sum_probs=25.9

Q ss_pred             HHHHHHHHHHHHHHHHHHh----hCCcccCCCCCcceeeecC
Q 043346           39 SHLIKKFLYCILSGISYCH----ARKIIHRDLTTMNLLADIE   76 (135)
Q Consensus        39 ~~~~~~~~~~i~~~l~~lh----~~~i~h~dl~~~nil~~~~   76 (135)
                      .+-++.++.|++.-.-...    ..+.+|.||||+||++-.+
T Consensus       278 ~~YikfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds  319 (444)
T PHA03111        278 VEYIKFIFLQIALLYIKIYELPCCDNFLHVDLKPDNILIFDS  319 (444)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCCCcceeeeccCCCCcEEEecC
Confidence            3456667777765442232    3578999999999999733

>PRK10271 thiK thiamine kinase; Provisional

Probab=91.82  E-value=0.19  Score=31.88  Aligned_cols=30  Identities=20%  Similarity=0.256  Sum_probs=23.9

Q ss_pred             CcccCCCCCcceeeecCCCeeEEeccccccccc
Q 043346           60 KIIHRDLTTMNLLADIENKTVKIAADSGMAKEI   92 (135)
Q Consensus        60 ~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~~   92 (135)
                      ..+|+|+.|.|+++. +.+ +++ +|++.+..-
T Consensus        78 ~p~H~D~~~~N~~~~-~~~-~~l-IDwe~a~~g  107 (188)
T PRK10271         78 APLHMDVHAGNLVHS-ASG-LRL-IDWEYAGDG  107 (188)
T ss_pred             eeecCCCCCccEEEE-CCC-EEE-EeCCcccCC
Confidence            568999999999987 545 777 799988643

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=91.81  E-value=0.2  Score=33.08  Aligned_cols=36  Identities=19%  Similarity=0.343  Sum_probs=28.6

Q ss_pred             HHHHHHHhh--CCcccCCCCCcceeeecCCCeeEEecccc
Q 043346           50 LSGISYCHA--RKIIHRDLTTMNLLADIENKTVKIAADSG   87 (135)
Q Consensus        50 ~~~l~~lh~--~~i~h~dl~~~nil~~~~~~~~~i~~d~~   87 (135)
                      +.++.-.|+  .+.+|+|..|+||+.+ ..|.+|+ .|=+
T Consensus       151 i~~L~~fH~~~~~~lHGD~np~NiM~D-~~G~lKl-VDP~  188 (308)
T PF07387_consen  151 IKDLMDFHSENQHCLHGDCNPDNIMCD-KFGYLKL-VDPV  188 (308)
T ss_pred             HHHHHHhhccCCCeecCCCChhheeec-CCCCEEe-cChh
Confidence            455677784  5899999999999999 7788888 4644

The function of this family is unknown.

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=91.58  E-value=0.18  Score=33.90  Aligned_cols=32  Identities=25%  Similarity=0.326  Sum_probs=23.8

Q ss_pred             CCcccCCCCCcceeeecCCCeeEEecccccccc
Q 043346           59 RKIIHRDLTTMNLLADIENKTVKIAADSGMAKE   91 (135)
Q Consensus        59 ~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~   91 (135)
                      ..++|+|+++.|++++.+....-+ +||+.+..
T Consensus       185 ~~lvHGD~~~~Nilv~~~~~~~gv-iDWe~a~i  216 (276)
T cd05152         185 TVLVHGDLHPGHILIDEDARVTGL-IDWTEAKV  216 (276)
T ss_pred             CeeEeCCCCCCcEEEeCCCCEEEE-ECcHhccc
Confidence            458999999999999933333446 69997753

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=91.29  E-value=0.43  Score=32.53  Aligned_cols=30  Identities=20%  Similarity=0.248  Sum_probs=23.9

Q ss_pred             CCcccCCCCCcceeeecCCCeeEEeccccccc
Q 043346           59 RKIIHRDLTTMNLLADIENKTVKIAADSGMAK   90 (135)
Q Consensus        59 ~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~   90 (135)
                      .+++|+|+.++|++++ +++.+.+ +||..+.
T Consensus       196 ~~lcHgD~~~~Nvl~~-~~~~~~i-IDfd~~~  225 (309)
T TIGR02904       196 TVLVHGKLSLSHFLYD-ETRGGYF-INFEKAS  225 (309)
T ss_pred             eeeeCCCCcHHhEEEc-CCCCEEE-EEhhhcc
Confidence            3799999999999998 4455666 5887765

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>PRK06149 hypothetical protein; Provisional

Probab=91.18  E-value=0.44  Score=37.88  Aligned_cols=33  Identities=18%  Similarity=0.217  Sum_probs=24.4

Q ss_pred             hCCcccCCCCCcceeeecCC-C--e-eEEecccccccc
Q 043346           58 ARKIIHRDLTTMNLLADIEN-K--T-VKIAADSGMAKE   91 (135)
Q Consensus        58 ~~~i~h~dl~~~nil~~~~~-~--~-~~i~~d~~~~~~   91 (135)
                      ..+++|.|+++.||+++.+. +  . .-+ +|||.+..
T Consensus       207 ~~g~IH~Dl~~~Nilv~~~~~~~~~v~gi-IDFgD~~~  243 (972)
T PRK06149        207 PLQAVHLDITDDNVVGSRDADGRWQPDGV-IDFGDLVR  243 (972)
T ss_pred             cccccCCCCCcccEEEcCCCCCCcceeEE-EEcccchh
Confidence            36899999999999998442 2  1 245 69998753

>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly

Probab=90.72  E-value=0.36  Score=33.94  Aligned_cols=35  Identities=20%  Similarity=0.122  Sum_probs=23.2

Q ss_pred             HHHHHHHHHHHHHHH---HHh-hCCcccCCCCCcceeee
Q 043346           40 HLIKKFLYCILSGIS---YCH-ARKIIHRDLTTMNLLAD   74 (135)
Q Consensus        40 ~~~~~~~~~i~~~l~---~lh-~~~i~h~dl~~~nil~~   74 (135)
                      +-++.++.|++.-.-   .+- ..+.+|.||||+||++-
T Consensus       275 ~YvkfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiF  313 (434)
T PF05445_consen  275 EYVKFIFLQIALLYIKIYELPCCTNFLHVDLKPDNILIF  313 (434)
T ss_pred             HHHHHHHHHHHHHHeeeecCCCcceeeecccCcCcEEEe
Confidence            345566666654321   121 35789999999999987

; GO: 0004672 protein kinase activity, 0005524 ATP binding

>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain

Probab=90.67  E-value=0.85  Score=28.99  Aligned_cols=33  Identities=18%  Similarity=0.237  Sum_probs=24.7

Q ss_pred             hCCcccCCCCCcceeeecCC-C---eeEEecccccccc
Q 043346           58 ARKIIHRDLTTMNLLADIEN-K---TVKIAADSGMAKE   91 (135)
Q Consensus        58 ~~~i~h~dl~~~nil~~~~~-~---~~~i~~d~~~~~~   91 (135)
                      ...++|+|+.+.|+++..+. +   .+.+ +||..+..
T Consensus       119 ~~vl~HgD~~~~N~~~~~~~~~~~~~~~l-iDfq~~~~  155 (196)
T smart00587      119 FNVLNHGDLWANNIMFKYDDEGKPEDVAL-IDFQLSHY  155 (196)
T ss_pred             ceEEeeCCCCccceeeccCCCCCccceEE-EecccCCc
Confidence            35789999999999997432 2   4667 69987753

subfamily of choline kinases

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=90.57  E-value=0.23  Score=34.27  Aligned_cols=32  Identities=19%  Similarity=0.196  Sum_probs=26.0

Q ss_pred             CcccCCCCCcceeeecCCCeeEEeccccccccc
Q 043346           60 KIIHRDLTTMNLLADIENKTVKIAADSGMAKEI   92 (135)
Q Consensus        60 ~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~~   92 (135)
                      -.+|.|+.+.||++..+.+.+++ +||..+...
T Consensus       183 v~CHnDl~~~NiL~~~~~~~l~l-ID~EYag~n  214 (330)
T PLN02421        183 VFAHNDLLSGNLMLNEDEGKLYF-IDFEYGSYS  214 (330)
T ss_pred             EEEECCCCcccEEEeCCCCcEEE-EcccccCCC
Confidence            37899999999999745567888 799988654

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=89.15  E-value=0.6  Score=30.16  Aligned_cols=38  Identities=21%  Similarity=0.219  Sum_probs=29.9

Q ss_pred             HHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEecccccc
Q 043346           45 FLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMA   89 (135)
Q Consensus        45 ~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~   89 (135)
                      -+.++++-+..+|..||+-+|+++.|..=      -++ .|||.+
T Consensus       169 ~~~~~~~dl~~~~k~gI~~~Dv~~~ny~~------G~l-vDfs~~  206 (207)
T PF13095_consen  169 DIPQMLRDLKILHKLGIVPRDVKPRNYRG------GKL-VDFSSS  206 (207)
T ss_pred             HHHHHHHHHHHHHHCCeeeccCccccccC------CEE-EecccC
Confidence            35677888899999999999999999862      255 588753

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=88.17  E-value=0.45  Score=32.89  Aligned_cols=31  Identities=23%  Similarity=0.307  Sum_probs=24.2

Q ss_pred             CCcccCCCCCcceeeecCCCeeEEecccccccc
Q 043346           59 RKIIHRDLTTMNLLADIENKTVKIAADSGMAKE   91 (135)
Q Consensus        59 ~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~   91 (135)
                      ..++|+|+.+.|++++. .+.+-+ .||+.+..
T Consensus       198 ~~lvHGD~~~gNlii~~-~~~~gV-lDwe~~~l  228 (321)
T COG3173         198 PVLVHGDYRPGNLIIDP-GRPTGV-LDWELATL  228 (321)
T ss_pred             ceeeeCCcccCCEEEeC-CCeeEE-Eecccccc
Confidence            46899999999999994 444556 59998753

>PRK11768 serine/threonine protein kinase; Provisional

Probab=87.33  E-value=1.3  Score=30.55  Aligned_cols=29  Identities=21%  Similarity=0.135  Sum_probs=22.9

Q ss_pred             CCcccCCCCCcceeeecCCCeeEEecccccccc
Q 043346           59 RKIIHRDLTTMNLLADIENKTVKIAADSGMAKE   91 (135)
Q Consensus        59 ~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~   91 (135)
                      .+++|+|+.+.|+++. +  ...+ +||+.+..
T Consensus       196 ~~liHgD~h~~NvL~~-d--~~~i-IDFDd~~~  224 (325)
T PRK11768        196 LLRLHGDCHPGNILWR-D--GPHF-VDLDDARM  224 (325)
T ss_pred             ccceecCCCchhcccc-C--CcEE-EeCCCCCC
Confidence            4789999999999995 4  3456 69988763

>PRK12396 5-methylribose kinase; Reviewed

Probab=87.17  E-value=1.1  Score=32.11  Aligned_cols=30  Identities=30%  Similarity=0.461  Sum_probs=23.1

Q ss_pred             hCCcccCCCCCcceeeecCCCeeEEeccccccc
Q 043346           58 ARKIIHRDLTTMNLLADIENKTVKIAADSGMAK   90 (135)
Q Consensus        58 ~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~   90 (135)
                      ...++|+|++|.||+++ . ...++ +|..++-
T Consensus       226 ~~aLlHGDlHtGSI~v~-~-~~~kv-IDpEFAf  255 (409)
T PRK12396        226 AQALIHGDLHTGSVFVK-N-DSTKV-IDPEFAF  255 (409)
T ss_pred             chhhccCcCCCCCEEec-C-CceEE-Ecccccc
Confidence            36799999999999999 3 34666 5877663

>PRK06148 hypothetical protein; Provisional

Probab=86.91  E-value=0.61  Score=37.30  Aligned_cols=32  Identities=28%  Similarity=0.502  Sum_probs=24.3

Q ss_pred             CCcccCCCCCcceeeecCCC-eeE-Eecccccccc
Q 043346           59 RKIIHRDLTTMNLLADIENK-TVK-IAADSGMAKE   91 (135)
Q Consensus        59 ~~i~h~dl~~~nil~~~~~~-~~~-i~~d~~~~~~   91 (135)
                      .+++|.|+++.||+++.+.. .+. + +|||.+..
T Consensus       203 ~~vIHgDln~~NiLv~~~~~~~isGi-IDFgDa~~  236 (1013)
T PRK06148        203 AQVIHNDANDYNILVDADDGERISGL-IDFGDAVH  236 (1013)
T ss_pred             cceECCCCCcccEEEcCCCCcceEEE-EECccccc
Confidence            57999999999999984431 344 5 69998754

>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]

Probab=85.94  E-value=4  Score=29.79  Aligned_cols=56  Identities=21%  Similarity=0.256  Sum_probs=38.9

Q ss_pred             EEEeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH-hhCCcccCCCCCcceeee
Q 043346           18 LVFEYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYC-HARKIIHRDLTTMNLLAD   74 (135)
Q Consensus        18 lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~l-h~~~i~h~dl~~~nil~~   74 (135)
                      ++=+|..| ++..+++. ...++....+++.-.+.|+--+ --.+.+|.|+.|.||++.
T Consensus       322 l~E~~~~Gl~v~~~v~~-~~~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlir  379 (565)
T KOG1236|consen  322 LVETYERGLSVLRFVKW-KSQPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIR  379 (565)
T ss_pred             eeeeccccccHHhhhhc-ccChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEE
Confidence            44445656 88888876 3455566666666666665443 346899999999999986

>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function

Probab=84.29  E-value=2  Score=28.93  Aligned_cols=32  Identities=25%  Similarity=0.336  Sum_probs=24.2

Q ss_pred             CCcccCCCCCcceeeecCCC----eeEEecccccccc
Q 043346           59 RKIIHRDLTTMNLLADIENK----TVKIAADSGMAKE   91 (135)
Q Consensus        59 ~~i~h~dl~~~nil~~~~~~----~~~i~~d~~~~~~   91 (135)
                      +-++|+|+.+.|+++..+..    .+++ .||..++.
T Consensus       215 ~vl~HGD~w~nNilf~~~~~g~~~~~~l-iDfQ~~~~  250 (294)
T PF02958_consen  215 NVLCHGDFWTNNILFKYDDDGKPIDVVL-IDFQLARY  250 (294)
T ss_pred             eEEEcCccCHHhEeEcccccccccccee-eccccccC
Confidence            45889999999999974432    4666 69887753

All known members of this group are proteins from drosophila and Caenorhabditis elegans.

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=84.19  E-value=0.78  Score=32.76  Aligned_cols=30  Identities=30%  Similarity=0.458  Sum_probs=23.7

Q ss_pred             hCCcccCCCCCcceeeecCCCeeEEeccccccc
Q 043346           58 ARKIIHRDLTTMNLLADIENKTVKIAADSGMAK   90 (135)
Q Consensus        58 ~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~   90 (135)
                      ...++|+|+.+.||++. .+ .+++ +|+.++.
T Consensus       222 ~~~l~HgDl~~gni~~~-~~-~~~v-iD~E~a~  251 (401)
T PRK09550        222 AEALLHGDLHTGSIFVT-EE-ETKV-IDPEFAF  251 (401)
T ss_pred             CCceeeccCCcccEEee-CC-CcEE-Eeccccc
Confidence            35789999999999998 33 4677 6998664

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=83.69  E-value=3.5  Score=26.36  Aligned_cols=68  Identities=24%  Similarity=0.223  Sum_probs=42.7

Q ss_pred             ceeEEEeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCC--cceeeecCCCeeEEecccccccc
Q 043346           15 RENLVFEYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTT--MNLLADIENKTVKIAADSGMAKE   91 (135)
Q Consensus        15 ~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~--~nil~~~~~~~~~i~~d~~~~~~   91 (135)
                      ..++.|||++| .|...-...   +.+.    ...++...--|-..||-|..++-  .|+++. + +.+.+ +||..+..
T Consensus        86 ~~~i~me~i~G~~L~~~~~~~---~rk~----l~~vlE~a~~LD~~GI~H~El~~~~k~vlv~-~-~~~~i-IDFd~At~  155 (201)
T COG2112          86 EDFIRMEYIDGRPLGKLEIGG---DRKH----LLRVLEKAYKLDRLGIEHGELSRPWKNVLVN-D-RDVYI-IDFDSATF  155 (201)
T ss_pred             hhhhhhhhhcCcchhhhhhcc---cHHH----HHHHHHHHHHHHHhccchhhhcCCceeEEec-C-CcEEE-EEccchhh
Confidence            34567999976 776544331   2233    34455555556678999999876  355555 3 36677 69998874


Q ss_pred             c
Q 043346           92 I   92 (135)
Q Consensus        92 ~   92 (135)
                      .
T Consensus       156 k  156 (201)
T COG2112         156 K  156 (201)
T ss_pred             c
Confidence            3

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	135
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		6e-18
3gbz_A	329	Structure Of The Cmgc Cdk Kinase From Giardia Lambl		1e-17
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		1e-17
1ung_A	292	Structural Mechanism For The Inhibition Of Cdk5-P25		2e-17
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		4e-17
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		4e-17
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		4e-17
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		7e-17
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		7e-17
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		8e-17
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		2e-16
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		2e-16
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		2e-16
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		2e-16
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		2e-16
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		2e-16
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		2e-16
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		2e-16
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		2e-16
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		3e-16
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		4e-16
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		4e-16
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		5e-16
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		7e-16
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		7e-16
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		8e-16
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		8e-16
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		8e-16
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		8e-16
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		8e-16
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		8e-16
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		8e-16
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		8e-16
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		8e-16
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		9e-16
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		9e-16
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		1e-15
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		1e-15
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		1e-15
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		1e-15
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		4e-15
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		4e-15
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		4e-15
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		5e-15
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		5e-15
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		8e-15
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		2e-13
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		3e-13
2i6l_A	320	Crystal Structure Of Human Mitogen Activated Protei		5e-13
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		2e-12
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		3e-12
3eb0_A	383	Crystal Structure Of Cgd4_240 From Cryptosporidium		2e-11
4e7w_A	394	Structure Of Gsk3 From Ustilago Maydis Length = 394		5e-11
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		2e-10
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		2e-10
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		2e-10
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		3e-10
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		3e-10
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		3e-10
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		3e-10
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		3e-10
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		3e-10
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		3e-10
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		3e-10
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		3e-10
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		4e-10
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		4e-10
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		4e-10
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		4e-10
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		4e-10
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		4e-10
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		4e-10
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		4e-10
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		4e-10
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		4e-10
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		4e-10
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		5e-10
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		5e-10
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		5e-10
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		5e-10
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		5e-10
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		5e-10
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		5e-10
3rgf_A	405	Crystal Structure Of Human Cdk8CYCC Length = 405		5e-10
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		5e-10
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		5e-10
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		5e-10
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		5e-10
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		5e-10
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		5e-10
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		5e-10
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		6e-10
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		6e-10
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		6e-10
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		6e-10
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		7e-10
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		8e-10
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		8e-10
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		9e-10
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		9e-10
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		9e-10
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		1e-09
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		2e-09
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		2e-09
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		2e-09
3e3p_A	360	Glycogen Synthase Kinase From Leishmania Major Leng		2e-09
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		2e-09
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		2e-09
3e3b_X	339	Crystal Structure Of Catalytic Subunit Of Human Pro		2e-09
3juh_A	335	Crystal Structure Of A Mutant Of Human Protein Kina		3e-09
3ofm_A	350	Structure Of A Human Ck2alpha Prime, The Paralog Is		3e-09
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		4e-09
2zjw_A	340	Crystal Structure Of Human Ck2 Alpha Complexed With		4e-09
3h30_A	334	Crystal Structure Of The Catalytic Subunit Of Human		5e-09
3nga_A	333	Human Ck2 Catalytic Domain In Complex With Cx-4945		5e-09
1jwh_A	337	Crystal Structure Of Human Protein Kinase Ck2 Holoe		5e-09
3bqc_A	335	High Ph-Value Crystal Structure Of Emodin In Comple		5e-09
3nsz_A	330	Human Ck2 Catalytic Domain In Complex With Amppn Le		5e-09
1pjk_A	334	Crystal Structure Of A C-terminal Deletion Mutant O		5e-09
3mb6_A	331	Human Ck2 Catalytic Domain In Complex With A Difura		5e-09
2r7i_A	335	Crystal Structure Of Catalytic Subunit Of Protein K		5e-09
3q9w_A	336	Crystal Structure Of Human Ck2 Alpha In Complex Wit		5e-09
4dgm_A	326	Crystal Structure Of Maize Ck2 In Complex With The		5e-09
3q04_A	328	Crystal Structure Of The Apo-Form Of Human Ck2 Alph		5e-09
4dgn_A	326	Crystal Structure Of Maize Ck2 In Complex With The		5e-09
1na7_A	329	Crystal Structure Of The Catalytic Subunit Of Human		5e-09
3u87_A	349	Structure Of A Chimeric Construct Of Human Ck2alpha		6e-09
1m2p_A	325	Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- Anthra		6e-09
3kxg_A	327	Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subun		6e-09
1daw_A	327	Crystal Structure Of A Binary Complex Of Protein Ki		6e-09
2qc6_A	332	Protein Kinase Ck2 In Complex With Dbc Length = 332		6e-09
2pvh_A	352	Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]tri		6e-09
3pvg_A	331	Crystal Structure Of Z. Mays Ck2 Alpha Subunit In C		6e-09
4anm_A	335	Complex Of Ck2 With A Cdc7 Inhibitor Length = 335		6e-09
1ds5_A	332	Dimeric Crystal Structure Of The Alpha Subunit In C		6e-09
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		1e-08
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		1e-08
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		1e-08
4dgl_C	335	Crystal Structure Of The Ck2 Tetrameric Holoenzyme		4e-08
3fi3_A	364	Crystal Structure Of Jnk3 With Indazole Inhibitor,		6e-08
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		6e-08
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		6e-08
3kvx_A	364	Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le		7e-08
2r9s_A	356	C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu		8e-08
3fv8_A	355	Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le		8e-08
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		9e-08
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		1e-07
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		1e-07
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		1e-07
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		1e-07
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		1e-07
3rp9_A	458	Crystal Structure Of The Apo Mapk From Toxoplasma G		1e-07
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		1e-07
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		1e-07
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		1e-07
4ec8_A	373	Structure Of Full Length Cdk9 In Complex With Cycli		1e-07
3mi9_A	351	Crystal Structure Of Hiv-1 Tat Complexed With Human		1e-07
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		1e-07
3blh_A	331	Crystal Structure Of Human Cdk9CYCLINT1 Length = 33		1e-07
4bcf_A	331	Structure Of Cdk9 In Complex With Cyclin T And A 2-		1e-07
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		1e-07
3fi2_A	353	Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib		2e-07
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		2e-07
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		2e-07
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		2e-07
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		2e-07
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		2e-07
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		2e-07
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		2e-07
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		2e-07
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		2e-07
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		2e-07
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		2e-07
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		2e-07
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		2e-07
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		2e-07
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		2e-07
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		2e-07
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		2e-07
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		3e-07
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		3e-07
2g01_A	370	Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit		3e-07
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		3e-07
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		3e-07
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		3e-07
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		3e-07
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		3e-07
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		3e-07
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		3e-07
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		3e-07
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		3e-07
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		3e-07
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		3e-07
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		3e-07
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		3e-07
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		3e-07
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		4e-07
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		4e-07
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		4e-07
3hec_A	348	P38 In Complex With Imatinib Length = 348		4e-07
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		4e-07
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		4e-07
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		4e-07
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		4e-07
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		4e-07
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		4e-07
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		4e-07
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		4e-07
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		4e-07
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		4e-07
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		4e-07
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		4e-07
2oza_B	366	Structure Of P38alpha Complex Length = 366		4e-07
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		4e-07
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		4e-07
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		4e-07
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		4e-07
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		4e-07
2exc_X	356	Inhibitor Complex Of Jnk3 Length = 356		4e-07
4h36_A	356	Crystal Structure Of Jnk3 In Complex With Atf2 Pept		4e-07
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		4e-07
2o0u_A	364	Crystal Structure Of Human Jnk3 Complexed With N-{3		4e-07
2b1p_A	355	Inhibitor Complex Of Jnk3 Length = 355		4e-07
3o17_A	370	Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3		4e-07
2ok1_A	365	Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3		4e-07
1pmn_A	364	Crystal Structure Of Jnk3 In Complex With An Imidaz		4e-07
3oxi_A	362	Design And Synthesis Of Disubstituted Thiophene And		4e-07
3ptg_A	363	Design And Synthesis Of A Novel, Orally Efficacious		4e-07
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		4e-07
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		4e-07
1jnk_A	423	The C-Jun N-Terminal Kinase (Jnk3s) Complexed With		5e-07
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		5e-07
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		5e-07
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		5e-07
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		5e-07
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		6e-07
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		6e-07
3elj_A	369	Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine		6e-07
3pze_A	358	Jnk1 In Complex With Inhibitor Length = 358		6e-07
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		6e-07
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		7e-07
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		7e-07
4exu_A	371	Mapk13, Inactive Form Length = 371		7e-07
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		7e-07
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		8e-07
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		9e-07
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		9e-07
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		1e-06
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		1e-06
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		1e-06
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		1e-06
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		1e-06
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		1e-06
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		1e-06
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		1e-06
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		1e-06
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		1e-06
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		1e-06
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		1e-06
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		1e-06
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		1e-06
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		2e-06
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		2e-06
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		2e-06
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		2e-06
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		2e-06
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		2e-06
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		2e-06
2xs0_A	386	Linear Binding Motifs For Jnk And For Calcineurin A		2e-06
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		2e-06
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		2e-06
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		3e-06
3n9x_A	432	Crystal Structure Of Map Kinase From Plasmodium Ber		3e-06
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		3e-06
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		3e-06
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		3e-06
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		3e-06
3nie_A	429	Crystal Structure Of Pf11_0147 Length = 429		3e-06
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		3e-06
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		4e-06
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		4e-06
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		4e-06
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		4e-06
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		5e-06
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		5e-06
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		6e-06
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		6e-06
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		6e-06
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		6e-06
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		6e-06
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		7e-06
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		7e-06
3pg1_A	362	Map Kinase Lmampk10 From Leishmania Major (1.95 Ang		8e-06
3uib_A	362	Map Kinase Lmampk10 From Leishmania Major In Comple		8e-06
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		9e-06
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		9e-06
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		9e-06
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		1e-05
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		1e-05
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		1e-05
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		1e-05
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		1e-05
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		1e-05
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		1e-05
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		1e-05
1zyc_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		1e-05
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-05
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		2e-05
3b2t_A	311	Structure Of Phosphotransferase Length = 311		2e-05
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		3e-05
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-05
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		3e-05
3kvw_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		4e-05
3k2l_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		4e-05
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		4e-05
4azf_A	417	Human Dyrk2 In Complex With Leucettine L41 Length =		4e-05
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		5e-05
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		5e-05
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		6e-05
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		6e-05
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		6e-05
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		6e-05
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		6e-05
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		6e-05
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		6e-05
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		6e-05
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		6e-05
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		6e-05
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		7e-05
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		7e-05
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		7e-05
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		7e-05
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		7e-05
3a7f_A	303	Human Mst3 Kinase Length = 303		7e-05
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		7e-05
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		7e-05
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		7e-05
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		7e-05
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		7e-05
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		7e-05
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		7e-05
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		7e-05
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		7e-05
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		7e-05
2pzp_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		8e-05
2pwl_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		8e-05
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		8e-05
2q0b_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		9e-05
2py3_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		9e-05
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		9e-05
2pz5_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		9e-05
2qr7_A	342	2.0a X-Ray Structure Of C-Terminal Kinase Domain Of		9e-05
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		1e-04
1gjo_A	316	The Fgfr2 Tyrosine Kinase Domain Length = 316		1e-04
3ri1_A	313	Crystal Structure Of The Catalytic Domain Of Fgfr2		1e-04
3kxx_A	317	Structure Of The Mutant Fibroblast Growth Factor Re		1e-04
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		1e-04
2pvy_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-04
3cjf_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		1e-04
2psq_A	370	Crystal Structure Of Unphosphorylated Unactivated W		1e-04
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		1e-04
2qr8_A	342	2.0a X-ray Structure Of C-terminal Kinase Domain Of		1e-04
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		1e-04
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		1e-04
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		1e-04
3q4t_A	322	Crystal Structure Of Activin Receptor Type-Iia (Acv		1e-04
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		1e-04
2pvf_A	334	Crystal Structure Of Tyrosine Phosphorylated Activa		2e-04
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		2e-04
3cly_A	334	Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase		2e-04
2iwi_A	312	Crystal Structure Of The Human Pim2 In Complex With		2e-04
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		2e-04
2pzr_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-04
3soa_A	444	Full-Length Human Camkii Length = 444		2e-04
3c7q_A	316	Structure Of Vegfr2 Kinase Domain In Complex With B		2e-04
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		2e-04
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		2e-04
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		2e-04
3kk9_A	282	Camkii Substrate Complex B Length = 282		2e-04
3kk8_A	284	Camkii Substrate Complex A Length = 284		2e-04
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		2e-04
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		2e-04
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		3e-04
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		3e-04
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		3e-04
3cjg_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		3e-04
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		3e-04
3u6j_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		3e-04
3rhx_B	306	Crystal Structure Of The Catalytic Domain Of Fgfr1		3e-04
3ewh_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		3e-04
4agc_A	353	Crystal Structure Of Vegfr2 (Juxtamembrane And Kina		3e-04
3vnt_A	318	Crystal Structure Of The Kinase Domain Of Human Veg		3e-04
1y6a_A	366	Crystal Structure Of Vegfr2 In Complex With A 2-Ani		3e-04
3vhe_A	359	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		3e-04
3vid_A	356	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		3e-04
3js2_A	317	Crystal Structure Of Minimal Kinase Domain Of Fibro		3e-04
2oh4_A	316	Crystal Structure Of Vegfr2 With A Benzimidazole-Ur		3e-04
3vhk_A	368	Crystal Structure Of The Vegfr2 Kinase Domain In Co		3e-04
2xir_A	316	Crystal Structure Of The Vegfr2 Kinase Domain In Co		3e-04
1fgk_A	310	Crystal Structure Of The Tyrosine Kinase Domain Of		3e-04
1yhs_A	273	Crystal Structure Of Pim-1 Bound To Staurosporine L		3e-04
3c4f_A	302	Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M		3e-04
3gql_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		3e-04
3tt0_A	382	Co-Structure Of Fibroblast Growth Factor Receptor 1		3e-04
4f63_A	309	Crystal Structure Of Human Fibroblast Growth Factor		3e-04
3gqi_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		4e-04
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		4e-04
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		4e-04
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		4e-04
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		4e-04
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		4e-04
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		4e-04
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		4e-04
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		4e-04
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		4e-04
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		4e-04
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		4e-04
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		5e-04
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		5e-04
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		5e-04
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		5e-04
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		5e-04
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		5e-04
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		5e-04
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		5e-04
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		5e-04
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		5e-04
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		5e-04
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		5e-04
1zxe_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		6e-04
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		6e-04
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		6e-04
3uc4_A	362	The Crystal Structure Of Snf1-Related Kinase 2.6 Le		7e-04
4dtk_A	276	Novel And Selective Pan-Pim Kinase Inhibitor Length		7e-04
3ujg_A	361	Crystal Structure Of Snrk2.6 In Complex With Hab1 L		7e-04
3r00_A	299	The Discovery Of Novel Benzofuran-2-Carboxylic Acid		7e-04
1yxs_A	293	Crystal Structure Of Kinase Pim1 With P123m Mutatio		7e-04
4a7c_A	308	Crystal Structure Of Pim1 Kinase With Etp46546 Leng		7e-04
3jxw_A	294	Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-		7e-04
1ywn_A	316	Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p		7e-04
1ywv_A	293	Crystal Structures Of Proto-Oncogene Kinase Pim1: A		7e-04
4as0_A	273	Cyclometalated Phthalimides As Protein Kinase Inhib		7e-04
3c4e_A	273	Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7		7e-04
2p2i_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		7e-04
2xix_A	301	Protein Kinase Pim-1 In Complex With Fragment-1 Fro		7e-04
2p2h_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		7e-04
3f2a_A	300	Crystal Structure Of Human Pim-1 In Complex With Da		7e-04
3uix_A	298	Crystal Structure Of Pim1 Kinase In Complex With Sm		7e-04
1xqz_A	300	Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolut		7e-04
2xiy_A	301	Protein Kinase Pim-1 In Complex With Fragment-2 Fro		7e-04
2xj0_A	301	Protein Kinase Pim-1 In Complex With Fragment-4 Fro		7e-04
3dcv_A	328	Crystal Structure Of Human Pim1 Kinase Complexed Wi		8e-04
4alv_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		8e-04
2bil_B	313	The Human Protein Kinase Pim1 In Complex With Its C		8e-04
3cy3_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		8e-04
2bik_B	313	Human Pim1 Phosphorylated On Ser261 Length = 313		8e-04
3a99_A	320	Structure Of Pim-1 Kinase Crystallized In The Prese		8e-04
3ma3_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		8e-04
3jpv_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		8e-04
2j2i_B	312	Crystal Structure Of The Humab Pim1 In Complex With		8e-04
1xws_A	313	Crystal Structure Of The Human Pim1 Kinase Domain L		8e-04
2obj_A	333	Crystal Structure Of Human Pim-1 Kinase In Complex		8e-04
4alu_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		8e-04
3cxw_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		8e-04
1vr2_A	316	Human Vascular Endothelial Growth Factor Receptor 2		9e-04

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score = 85.9 bits (211), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 43/117 (36%), Positives = 70/117 (59%), Gaps = 3/117 (2%)
Query: 14  KRENLVFEYVNINLHKFIQQYHP-MDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLL 72
           K+  LVFE+ + +L K+    +  +D  ++K FL+ +L G+ +CH+R ++HRDL   NLL
Sbjct: 74  KKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLL 133
Query: 73  ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            +  N  +K+ AD G+A+    P   ++ E+V L YR P +LFG      +IDMW+ 
Sbjct: 134 IN-RNGELKL-ADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSA 188

>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 71/119 (59%), Gaps = 5/119 (4%)
Query: 15  RENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
           R +L+FEY   +L K++ +   +   +IK FLY +++G+++CH+R+ +HRDL   NLL  
Sbjct: 107 RLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLS 166
Query: 75  I----ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           +    E   +KI  D G+A+    P    T E++ L YR P+IL G  +   ++D+W++
Sbjct: 167 VSDASETPVLKI-GDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSI 224

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 71/119 (59%), Gaps = 3/119 (2%)
Query: 12  VHKRENLVFEYVNINLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMN 70
             K   LVFEY++ +L +++    + ++ H +K FL+ +L G++YCH +K++HRDL   N
Sbjct: 71  TEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQN 130
Query: 71  LLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           LL + E   +K+ AD G+A+    P   +  E+V L YR P IL G T+    IDMW V
Sbjct: 131 LLIN-ERGELKL-ADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGV 187

>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 42/117 (35%), Positives = 70/117 (59%), Gaps = 3/117 (2%)
Query: 14  KRENLVFEYVNINLHKFIQQYHP-MDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLL 72
           K+  LVFE+ + +L K+    +  +D  ++K FL+ +L G+ +CH+R ++HRDL   NLL
Sbjct: 74  KKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLL 133
Query: 73  ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            +  N  +K+ A+ G+A+    P   ++ E+V L YR P +LFG      +IDMW+ 
Sbjct: 134 IN-RNGELKL-ANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSA 188

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 83.2 bits (204), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 48/117 (41%), Positives = 71/117 (60%), Gaps = 3/117 (2%)
Query: 14  KRENLVFEYVNINLHKFIQQYHP-MDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLL 72
           KR  LVFE+++ +L K +      ++S   K FL  +L+GI+YCH R+++HRDL   NLL
Sbjct: 73  KRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLL 132
Query: 73  ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            + E + +KI AD G+A+    P   +T E+V L YRAP +L G       ID+W+V
Sbjct: 133 INREGE-LKI-ADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSV 187

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 83.2 bits (204), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 48/117 (41%), Positives = 71/117 (60%), Gaps = 3/117 (2%)
Query: 14  KRENLVFEYVNINLHKFIQQYHP-MDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLL 72
           KR  LVFE+++ +L K +      ++S   K FL  +L+GI+YCH R+++HRDL   NLL
Sbjct: 73  KRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLL 132
Query: 73  ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            + E + +KI AD G+A+    P   +T E+V L YRAP +L G       ID+W+V
Sbjct: 133 INREGE-LKI-ADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSV 187

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 83.2 bits (204), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 48/117 (41%), Positives = 71/117 (60%), Gaps = 3/117 (2%)
Query: 14  KRENLVFEYVNINLHKFIQQYHP-MDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLL 72
           KR  LVFE+++ +L K +      ++S   K FL  +L+GI+YCH R+++HRDL   NLL
Sbjct: 73  KRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLL 132
Query: 73  ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            + E + +KI AD G+A+    P   +T E+V L YRAP +L G       ID+W+V
Sbjct: 133 INREGE-LKI-ADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSV 187

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 82.4 bits (202), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 71/114 (62%), Gaps = 4/114 (3%)
Query: 18  LVFEYVNINLHKFI--QQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           LVFE+++ +L KF+       +   LIK +L+ +L G+++CH+ +++HRDL   NLL + 
Sbjct: 79  LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT 138
Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           E   +K+ AD G+A+    P   +T E+V L YRAP+IL G      A+D+W++
Sbjct: 139 EG-AIKL-ADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSL 190

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 82.4 bits (202), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 44/116 (37%), Positives = 72/116 (62%), Gaps = 8/116 (6%)
Query: 18  LVFEYVNINLHKFIQQYH----PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLA 73
           LVFE+++ +L KF+        P+   LIK +L+ +L G+++CH+ +++HRDL   NLL 
Sbjct: 86  LVFEFLHQDLKKFMDASALTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 143
Query: 74  DIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           + E   +K+ AD G+A+    P   +T E+V L YRAP+IL G      A+D+W++
Sbjct: 144 NTEG-AIKL-ADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSL 197

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 82.4 bits (202), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 71/114 (62%), Gaps = 4/114 (3%)
Query: 18  LVFEYVNINLHKFI--QQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           LVFE+++ +L KF+       +   LIK +L+ +L G+S+CH+ +++HRDL   NLL + 
Sbjct: 79  LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHRVLHRDLKPQNLLINT 138
Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           E   +K+ AD G+A+    P   +T E+V L YRAP+IL G      A+D+W++
Sbjct: 139 EG-AIKL-ADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSL 190

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 71/114 (62%), Gaps = 4/114 (3%)
Query: 18  LVFEYVNINLHKFI--QQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           LVFE+++ +L KF+       +   LIK +L+ +L G+++CH+ +++HRDL   NLL + 
Sbjct: 79  LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT 138
Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           E   +K+ AD G+A+    P   +T E+V L YRAP+IL G      A+D+W++
Sbjct: 139 EG-AIKL-ADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSL 190

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 71/114 (62%), Gaps = 4/114 (3%)
Query: 18  LVFEYVNINLHKFI--QQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           LVFE+++ +L KF+       +   LIK +L+ +L G+++CH+ +++HRDL   NLL + 
Sbjct: 79  LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT 138
Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           E   +K+ AD G+A+    P   +T E+V L YRAP+IL G      A+D+W++
Sbjct: 139 EG-AIKL-ADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSL 190

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 71/114 (62%), Gaps = 4/114 (3%)
Query: 18  LVFEYVNINLHKFI--QQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           LVFE+++ +L KF+       +   LIK +L+ +L G+++CH+ +++HRDL   NLL + 
Sbjct: 78  LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT 137
Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           E   +K+ AD G+A+    P   +T E+V L YRAP+IL G      A+D+W++
Sbjct: 138 EG-AIKL-ADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSL 189

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 71/114 (62%), Gaps = 4/114 (3%)
Query: 18  LVFEYVNINLHKFI--QQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           LVFE+++ +L KF+       +   LIK +L+ +L G+++CH+ +++HRDL   NLL + 
Sbjct: 79  LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT 138
Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           E   +K+ AD G+A+    P   +T E+V L YRAP+IL G      A+D+W++
Sbjct: 139 EG-AIKL-ADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSL 190

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 71/114 (62%), Gaps = 4/114 (3%)
Query: 18  LVFEYVNINLHKFI--QQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           LVFE+++ +L KF+       +   LIK +L+ +L G+++CH+ +++HRDL   NLL + 
Sbjct: 78  LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT 137
Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           E   +K+ AD G+A+    P   +T E+V L YRAP+IL G      A+D+W++
Sbjct: 138 EG-AIKL-ADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSL 189

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 71/114 (62%), Gaps = 4/114 (3%)
Query: 18  LVFEYVNINLHKFI--QQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           LVFE+++ +L KF+       +   LIK +L+ +L G+++CH+ +++HRDL   NLL + 
Sbjct: 80  LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT 139
Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           E   +K+ AD G+A+    P   +T E+V L YRAP+IL G      A+D+W++
Sbjct: 140 EG-AIKL-ADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSL 191

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 71/114 (62%), Gaps = 4/114 (3%)
Query: 18  LVFEYVNINLHKFI--QQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           LVFE+++ +L KF+       +   LIK +L+ +L G+++CH+ +++HRDL   NLL + 
Sbjct: 78  LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT 137
Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           E   +K+ AD G+A+    P   +T E+V L YRAP+IL G      A+D+W++
Sbjct: 138 EG-AIKL-ADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSL 189

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 71/114 (62%), Gaps = 4/114 (3%)
Query: 18  LVFEYVNINLHKFI--QQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           LVFE+++ +L KF+       +   LIK +L+ +L G+++CH+ +++HRDL   NLL + 
Sbjct: 86  LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT 145
Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           E   +K+ AD G+A+    P   +T E+V L YRAP+IL G      A+D+W++
Sbjct: 146 EG-AIKL-ADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSL 197

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 44/116 (37%), Positives = 72/116 (62%), Gaps = 8/116 (6%)
Query: 18  LVFEYVNINLHKFIQQYH----PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLA 73
           LVFE+++ +L KF+        P+   LIK +L+ +L G+++CH+ +++HRDL   NLL 
Sbjct: 83  LVFEFLHQDLKKFMDASALTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 140
Query: 74  DIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           + E   +K+ AD G+A+    P   +T E+V L YRAP+IL G      A+D+W++
Sbjct: 141 NTEG-AIKL-ADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSL 194

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 71/114 (62%), Gaps = 4/114 (3%)
Query: 18  LVFEYVNINLHKFI--QQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           LVFE+++++L KF+       +   LIK +L+ +L G+++CH+ +++HRDL   NLL + 
Sbjct: 80  LVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINT 139
Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           E   +K+ AD G+A+    P   +  E+V L YRAP+IL G      A+D+W++
Sbjct: 140 EG-AIKL-ADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSL 191

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 80.1 bits (196), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 71/114 (62%), Gaps = 4/114 (3%)
Query: 18  LVFEYVNINLHKFI--QQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           LVFE+++++L KF+       +   LIK +L+ +L G+++CH+ +++HRDL   NLL + 
Sbjct: 82  LVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINT 141
Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           E   +K+ AD G+A+    P   +  E+V L YRAP+IL G      A+D+W++
Sbjct: 142 EG-AIKL-ADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSL 193

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 80.1 bits (196), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 70/114 (61%), Gaps = 4/114 (3%)
Query: 18  LVFEYVNINLHKFI--QQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           LVFE+V+ +L KF+       +   LIK +L+ +L G+++CH+ +++HRDL   NLL + 
Sbjct: 82  LVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT 141
Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           E   +K+ AD G+A+    P   +  E+V L YRAP+IL G      A+D+W++
Sbjct: 142 EG-AIKL-ADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSL 193

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 79.3 bits (194), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 44/116 (37%), Positives = 71/116 (61%), Gaps = 8/116 (6%)
Query: 18  LVFEYVNINLHKFIQQYH----PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLA 73
           LVFE+V+ +L  F+        P+   LIK +L+ +L G+++CH+ +++HRDL   NLL 
Sbjct: 78  LVFEHVHQDLKTFMDASALTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 135
Query: 74  DIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           + E   +K+ AD G+A+    P   +T E+V L YRAP+IL G      A+D+W++
Sbjct: 136 NTEG-AIKL-ADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSL 189

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 79.0 bits (193), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 70/114 (61%), Gaps = 4/114 (3%)
Query: 18  LVFEYVNINLHKFI--QQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           LVFE+++ +L KF+       +   LIK +L+ +L G+++CH+ +++HRDL   NLL + 
Sbjct: 83  LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT 142
Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           E   +K+ AD G+A+    P   +  E+V L YRAP+IL G      A+D+W++
Sbjct: 143 EG-AIKL-ADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSL 194

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 79.0 bits (193), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 70/114 (61%), Gaps = 4/114 (3%)
Query: 18  LVFEYVNINLHKFI--QQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           LVFE+++ +L KF+       +   LIK +L+ +L G+++CH+ +++HRDL   NLL + 
Sbjct: 78  LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT 137
Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           E   +K+ AD G+A+    P   +  E+V L YRAP+IL G      A+D+W++
Sbjct: 138 EG-AIKL-ADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSL 189

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 79.0 bits (193), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 70/114 (61%), Gaps = 4/114 (3%)
Query: 18  LVFEYVNINLHKFI--QQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           LVFE+++ +L KF+       +   LIK +L+ +L G+++CH+ +++HRDL   NLL + 
Sbjct: 79  LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT 138
Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           E   +K+ AD G+A+    P   +  E+V L YRAP+IL G      A+D+W++
Sbjct: 139 EG-AIKL-ADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSL 190

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 79.0 bits (193), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 70/114 (61%), Gaps = 4/114 (3%)
Query: 18  LVFEYVNINLHKFI--QQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           LVFE+++ +L KF+       +   LIK +L+ +L G+++CH+ +++HRDL   NLL + 
Sbjct: 80  LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT 139
Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           E   +K+ AD G+A+    P   +  E+V L YRAP+IL G      A+D+W++
Sbjct: 140 EG-AIKL-ADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSL 191

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 79.0 bits (193), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 70/114 (61%), Gaps = 4/114 (3%)
Query: 18  LVFEYVNINLHKFI--QQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           LVFE+++ +L KF+       +   LIK +L+ +L G+++CH+ +++HRDL   NLL + 
Sbjct: 82  LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT 141
Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           E   +K+ AD G+A+    P   +  E+V L YRAP+IL G      A+D+W++
Sbjct: 142 EG-AIKL-ADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSL 193

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 79.0 bits (193), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 70/114 (61%), Gaps = 4/114 (3%)
Query: 18  LVFEYVNINLHKFI--QQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           LVFE+++ +L KF+       +   LIK +L+ +L G+++CH+ +++HRDL   NLL + 
Sbjct: 81  LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT 140
Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           E   +K+ AD G+A+    P   +  E+V L YRAP+IL G      A+D+W++
Sbjct: 141 EG-AIKL-ADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSL 192

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 79.0 bits (193), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 70/114 (61%), Gaps = 4/114 (3%)
Query: 18  LVFEYVNINLHKFI--QQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           LVFE+++ +L KF+       +   LIK +L+ +L G+++CH+ +++HRDL   NLL + 
Sbjct: 79  LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT 138
Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           E   +K+ AD G+A+    P   +  E+V L YRAP+IL G      A+D+W++
Sbjct: 139 EG-AIKL-ADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSL 190

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 79.0 bits (193), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 70/114 (61%), Gaps = 4/114 (3%)
Query: 18  LVFEYVNINLHKFI--QQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           LVFE+++ +L KF+       +   LIK +L+ +L G+++CH+ +++HRDL   NLL + 
Sbjct: 82  LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT 141
Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           E   +K+ AD G+A+    P   +  E+V L YRAP+IL G      A+D+W++
Sbjct: 142 EG-AIKL-ADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSL 193

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 79.0 bits (193), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 70/114 (61%), Gaps = 4/114 (3%)
Query: 18  LVFEYVNINLHKFI--QQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           LVFE+++ +L KF+       +   LIK +L+ +L G+++CH+ +++HRDL   NLL + 
Sbjct: 79  LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT 138
Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           E   +K+ AD G+A+    P   +  E+V L YRAP+IL G      A+D+W++
Sbjct: 139 EG-AIKL-ADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSL 190

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 79.0 bits (193), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 70/114 (61%), Gaps = 4/114 (3%)
Query: 18  LVFEYVNINLHKFI--QQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           LVFE+++ +L KF+       +   LIK +L+ +L G+++CH+ +++HRDL   NLL + 
Sbjct: 81  LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT 140
Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           E   +K+ AD G+A+    P   +  E+V L YRAP+IL G      A+D+W++
Sbjct: 141 EG-AIKL-ADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSL 192

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 79.0 bits (193), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 70/114 (61%), Gaps = 4/114 (3%)
Query: 18  LVFEYVNINLHKFI--QQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           LVFE+++ +L KF+       +   LIK +L+ +L G+++CH+ +++HRDL   NLL + 
Sbjct: 78  LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT 137
Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           E   +K+ AD G+A+    P   +  E+V L YRAP+IL G      A+D+W++
Sbjct: 138 EG-AIKL-ADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSL 189

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 78.6 bits (192), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 70/114 (61%), Gaps = 4/114 (3%)
Query: 18  LVFEYVNINLHKFI--QQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           LVFE+++ +L KF+       +   LIK +L+ +L G+++CH+ +++HRDL   NLL + 
Sbjct: 79  LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT 138
Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           E   +K+ AD G+A+    P   +  E+V L YRAP+IL G      A+D+W++
Sbjct: 139 EG-AIKL-ADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSL 190

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 78.6 bits (192), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 70/114 (61%), Gaps = 4/114 (3%)
Query: 18  LVFEYVNINLHKFI--QQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           LVFE+++ +L KF+       +   LIK +L+ +L G+++CH+ +++HRDL   NLL + 
Sbjct: 80  LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT 139
Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           E   +K+ AD G+A+    P   +  E+V L YRAP+IL G      A+D+W++
Sbjct: 140 EG-AIKL-ADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSL 191

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 70/114 (61%), Gaps = 4/114 (3%)
Query: 18  LVFEYVNINLHKFI--QQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           LVFE+++++L  F+       +   LIK +L+ +L G+++CH+ +++HRDL   NLL + 
Sbjct: 81  LVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT 140
Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           E   +K+ AD G+A+    P   +  E+V L YRAP+IL G      A+D+W++
Sbjct: 141 EG-AIKL-ADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSL 192

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 70/114 (61%), Gaps = 4/114 (3%)
Query: 18  LVFEYVNINLHKFI--QQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           LVFE+++++L  F+       +   LIK +L+ +L G+++CH+ +++HRDL   NLL + 
Sbjct: 82  LVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT 141
Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           E   +K+ AD G+A+    P   +  E+V L YRAP+IL G      A+D+W++
Sbjct: 142 EG-AIKL-ADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSL 193

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 70/114 (61%), Gaps = 4/114 (3%)
Query: 18  LVFEYVNINLHKFI--QQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           LVFE+++ +L KF+       +   LIK +L+ +L G+++CH+ +++HRDL   NLL + 
Sbjct: 81  LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINT 140
Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           E   +K+ AD G+A+    P   +  E+V L YRAP+IL G      A+D+W++
Sbjct: 141 EG-AIKL-ADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSL 192

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 70/114 (61%), Gaps = 4/114 (3%)
Query: 18  LVFEYVNINLHKFI--QQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           LVFE+++ +L KF+       +   LIK +L+ +L G+++CH+ +++HRDL   NLL + 
Sbjct: 80  LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINT 139
Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           E   +K+ AD G+A+    P   +  E+V L YRAP+IL G      A+D+W++
Sbjct: 140 EG-AIKL-ADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSL 191

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 69/114 (60%), Gaps = 4/114 (3%)
Query: 18  LVFEYVNINLHKFI--QQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           LVFE+++ +L  F+       +   LIK +L+ +L G+++CH+ +++HRDL   NLL + 
Sbjct: 82  LVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT 141
Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           E   +K+ AD G+A+    P   +  E+V L YRAP+IL G      A+D+W++
Sbjct: 142 EG-AIKL-ADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSL 193

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 68/114 (59%), Gaps = 3/114 (2%)
Query: 17  NLVFEYVNINLHKFIQQYHP-MDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
            LVFE++  +L K + +    +    IK +LY +L G+++CH  +I+HRDL   NLL + 
Sbjct: 95  TLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLIN- 153
Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            +  +K+A D G+A+    P  ++T E+V L YRAP +L G      ++D+W++
Sbjct: 154 SDGALKLA-DFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSI 206

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 68/114 (59%), Gaps = 3/114 (2%)
Query: 17  NLVFEYVNINLHKFIQQYHP-MDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
            LVFE++  +L K + +    +    IK +LY +L G+++CH  +I+HRDL   NLL + 
Sbjct: 95  TLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLIN- 153
Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            +  +K+A D G+A+    P  ++T E+V L YRAP +L G      ++D+W++
Sbjct: 154 SDGALKLA-DFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSI 206

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 76.3 bits (186), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 69/114 (60%), Gaps = 4/114 (3%)
Query: 18  LVFEYVNINLHKFI--QQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           LVFE+++ +L  F+       +   LIK +L+ +L G+++CH+ +++HRDL   NLL + 
Sbjct: 79  LVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINT 138
Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           E   +K+ AD G+A+    P   +  E+V L YRAP+IL G      A+D+W++
Sbjct: 139 EG-AIKL-ADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSL 190

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 76.3 bits (186), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 72/117 (61%), Gaps = 3/117 (2%)
Query: 14  KRENLVFEYVNINLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLL 72
           KR  LVFE+V+  +   ++ + + +D  +++K+L+ I++GI +CH+  IIHRD+   N+L
Sbjct: 97  KRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENIL 156
Query: 73  ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
              ++  VK+  D G A+ + AP + +  E+    YRAP++L G      A+D+WA+
Sbjct: 157 VS-QSGVVKL-CDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAI 211

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 75.5 bits (184), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 66/117 (56%), Gaps = 8/117 (6%)
Query: 18  LVFEYVNINLHKFIQQY------HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNL 71
           LVFE+++ +L K++           ++ +L+K F + +L G+++CH  KI+HRDL   NL
Sbjct: 80  LVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNL 139
Query: 72  LADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWA 128
           L  I  +      D G+A+    P +  ++E+V L YRAP +L G      +ID+W+
Sbjct: 140 L--INKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWS 194

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 66/115 (57%), Gaps = 5/115 (4%)
Query: 17  NLVFEYVNINLHKFIQQYHPM--DSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
           +LVF+++  +L   I+    +   SH IK ++   L G+ Y H   I+HRDL   NLL D
Sbjct: 88  SLVFDFMETDLEVIIKDNSLVLTPSH-IKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLD 146
Query: 75  IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            EN  +K+A D G+AK   +P  A+  ++V   YRAP++LFG       +DMWAV
Sbjct: 147 -ENGVLKLA-DFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARMYGVGVDMWAV 199

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 42/116 (36%), Positives = 64/116 (55%), Gaps = 6/116 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           +V + +  +LH+ I    P+    ++ FLY +L G+ Y H+ ++IHRDL   NLL + EN
Sbjct: 137 VVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVN-EN 195
Query: 78  KTVKIAADSGMAKEIDAPFDAH---TTEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
             +KI  D GMA+ +      H    TE V  R YRAP+++        AID+W+V
Sbjct: 196 CELKI-GDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSV 250

>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320

Iteration: 1
 Score = 69.3 bits (168), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 66/114 (57%), Gaps = 5/114 (4%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           +V EY+  +L   ++Q   ++ H  + F+Y +L G+ Y H+  ++HRDL   NL  + E+
Sbjct: 99  IVQEYMETDLANVLEQGPLLEEH-ARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTED 157
Query: 78  KTVKIAADSGMAKEIDAPFD--AHTTEMVILR-YRAPKILFGRTNCFAAIDMWA 128
             +KI  D G+A+ +D  +    H +E ++ + YR+P++L    N   AIDMWA
Sbjct: 158 LVLKI-GDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWA 210

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 61/117 (52%), Gaps = 3/117 (2%)
Query: 14  KRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLL 72
           +R +LVFEY +   LH+  +    +  HL+K   +  L  +++CH    IHRD+   N+L
Sbjct: 75  RRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENIL 134
Query: 73  ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             I   +V    D G A+ +  P D +  E+    YR+P++L G T     +D+WA+
Sbjct: 135 --ITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAI 189

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 64/116 (55%), Gaps = 6/116 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           +V + +  +LH+ I    P+    ++ FLY +L G+ Y H+ ++IHRDL   NLL + EN
Sbjct: 136 VVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVN-EN 194
Query: 78  KTVKIAADSGMAKEIDAPFDAHT---TEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
             +KI  D GMA+ +      H    TE V  R YRAP+++        AID+W+V
Sbjct: 195 CELKI-GDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSV 249

>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 64/117 (54%), Gaps = 6/117 (5%)
Query: 17  NLVFEYVNINLHK----FIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLL 72
           N++ EYV   LHK    FI+    +  +LI  ++Y +   + + H+  I HRD+   NLL
Sbjct: 114 NVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLL 173
Query: 73  ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            + ++ T+K+  D G AK++  P +     +    YRAP+++ G T    +ID+W++
Sbjct: 174 VNSKDNTLKL-CDFGSAKKL-IPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSI 228

>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394

Iteration: 1
 Score = 62.8 bits (151), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 64/117 (54%), Gaps = 6/117 (5%)
Query: 17  NLVFEYVNINLHKFIQQY----HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLL 72
           NLV EYV   +++  + Y      M   LIK ++Y +L  ++Y H+  I HRD+   NLL
Sbjct: 114 NLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLL 173
Query: 73  ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            D  +  +K+  D G AK + A  + + + +    YRAP+++FG TN    ID+W+ 
Sbjct: 174 LDPPSGVLKL-IDFGSAKILIA-GEPNVSXICSRYYRAPELIFGATNYTTNIDIWST 228

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 6/116 (5%)
Query: 17  NLVFEYVNINLHKFIQQYHPMDSHL----IKKFLYCILSGISYCHARKIIHRDLTTMNLL 72
           NLV +YV   +++  + Y      L    +K ++Y +   ++Y H+  I HRD+   NLL
Sbjct: 129 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 188
Query: 73  ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWA 128
            D +   +K+  D G AK++    + + + +    YRAP+++FG T+  ++ID+W+
Sbjct: 189 LDPDTAVLKL-CDFGSAKQL-VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWS 242

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 62/120 (51%), Gaps = 8/120 (6%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           +V EY    L  +I Q   M     ++F   I+S + YCH  KI+HRDL   NLL D E+
Sbjct: 91  MVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLD-EH 149
Query: 78  KTVKIAADSGMAKEI-DAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWA---VLYLL 133
             VKI AD G++  + D  F    T      Y AP+++ G+      +D+W+   +LY++
Sbjct: 150 LNVKI-ADFGLSNIMTDGNF--LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVM 206

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 62/120 (51%), Gaps = 8/120 (6%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           +V EY    L  +I Q   M     ++F   I+S + YCH  KI+HRDL   NLL D E+
Sbjct: 90  MVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLD-EH 148
Query: 78  KTVKIAADSGMAKEI-DAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWA---VLYLL 133
             VKI AD G++  + D  F    T      Y AP+++ G+      +D+W+   +LY++
Sbjct: 149 LNVKI-ADFGLSNIMTDGNF--LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVM 205

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 6/116 (5%)
Query: 17  NLVFEYVNINLHKFIQQYHPMDSHL----IKKFLYCILSGISYCHARKIIHRDLTTMNLL 72
           NLV +YV   +++  + Y      L    +K ++Y +   ++Y H+  I HRD+   NLL
Sbjct: 123 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 182
Query: 73  ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWA 128
            D +   +K+  D G AK++    + + + +    YRAP+++FG T+  ++ID+W+
Sbjct: 183 LDPDTAVLKL-CDFGSAKQL-VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWS 236

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 6/116 (5%)
Query: 17  NLVFEYVNINLHKFIQQYHPMDSHL----IKKFLYCILSGISYCHARKIIHRDLTTMNLL 72
           NLV +YV   +++  + Y      L    +K ++Y +   ++Y H+  I HRD+   NLL
Sbjct: 133 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 192
Query: 73  ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWA 128
            D +   +K+  D G AK++    + + + +    YRAP+++FG T+  ++ID+W+
Sbjct: 193 LDPDTAVLKL-CDFGSAKQL-VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWS 246

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 6/116 (5%)
Query: 17  NLVFEYVNINLHKFIQQYHPMDSHL----IKKFLYCILSGISYCHARKIIHRDLTTMNLL 72
           NLV +YV   +++  + Y      L    +K ++Y +   ++Y H+  I HRD+   NLL
Sbjct: 131 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 190
Query: 73  ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWA 128
            D +   +K+  D G AK++    + + + +    YRAP+++FG T+  ++ID+W+
Sbjct: 191 LDPDTAVLKL-CDFGSAKQL-VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWS 244

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 6/116 (5%)
Query: 17  NLVFEYVNINLHKFIQQYHPMDSHL----IKKFLYCILSGISYCHARKIIHRDLTTMNLL 72
           NLV +YV   +++  + Y      L    +K ++Y +   ++Y H+  I HRD+   NLL
Sbjct: 129 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 188
Query: 73  ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWA 128
            D +   +K+  D G AK++    + + + +    YRAP+++FG T+  ++ID+W+
Sbjct: 189 LDPDTAVLKL-CDFGSAKQL-VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWS 242

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 6/116 (5%)
Query: 17  NLVFEYVNINLHKFIQQYHPMDSHL----IKKFLYCILSGISYCHARKIIHRDLTTMNLL 72
           NLV +YV   +++  + Y      L    +K ++Y +   ++Y H+  I HRD+   NLL
Sbjct: 174 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 233
Query: 73  ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWA 128
            D +   +K+  D G AK++    + + + +    YRAP+++FG T+  ++ID+W+
Sbjct: 234 LDPDTAVLKL-CDFGSAKQL-VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWS 287

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 62/120 (51%), Gaps = 8/120 (6%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           +V EY    L  +I Q   M     ++F   I+S + YCH  KI+HRDL   NLL D E+
Sbjct: 81  MVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLD-EH 139
Query: 78  KTVKIAADSGMAKEI-DAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWA---VLYLL 133
             VKI AD G++  + D  F    T      Y AP+++ G+      +D+W+   +LY++
Sbjct: 140 LNVKI-ADFGLSNIMTDGNF--LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVM 196

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 62/120 (51%), Gaps = 8/120 (6%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           +V EY    L  +I Q   M     ++F   I+S + YCH  KI+HRDL   NLL D E+
Sbjct: 85  MVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLD-EH 143
Query: 78  KTVKIAADSGMAKEI-DAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWA---VLYLL 133
             VKI AD G++  + D  F    T      Y AP+++ G+      +D+W+   +LY++
Sbjct: 144 LNVKI-ADFGLSNIMTDGNF--LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVM 200

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 6/116 (5%)
Query: 17  NLVFEYVNINLHKFIQQYHPMDSHL----IKKFLYCILSGISYCHARKIIHRDLTTMNLL 72
           NLV +YV   +++  + Y      L    +K ++Y +   ++Y H+  I HRD+   NLL
Sbjct: 95  NLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 154
Query: 73  ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWA 128
            D +   +K+  D G AK++    + + + +    YRAP+++FG T+  ++ID+W+
Sbjct: 155 LDPDTAVLKL-CDFGSAKQL-VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWS 208

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 8/133 (6%)
Query: 1   MQEMMKSMSLWVHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARK 60
           + +++++ ++   K   +V + +  +L+K ++  H  + H I  FLY IL G+ Y H+  
Sbjct: 88  INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH-ICYFLYQILRGLKYIHSAN 146
Query: 61  IIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHT---TEMVILR-YRAPKILFG 116
           ++HRDL   NLL +     +KI  D G+A+  D   D HT   TE V  R YRAP+I+  
Sbjct: 147 VLHRDLKPSNLLLNT-TSDLKI-CDFGLARVADPDHD-HTGFLTEYVATRWYRAPEIMLN 203
Query: 117 RTNCFAAIDMWAV 129
                 +ID+W+V
Sbjct: 204 SKGYTKSIDIWSV 216

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/133 (33%), Positives = 72/133 (54%), Gaps = 8/133 (6%)
Query: 1   MQEMMKSMSLWVHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARK 60
           + +++++ ++   K   LV   +  +L+K ++  H  + H I  FLY IL G+ Y H+  
Sbjct: 106 INDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDH-ICYFLYQILRGLKYIHSAN 164
Query: 61  IIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHT---TEMVILR-YRAPKILFG 116
           ++HRDL   NLL +     +KI  D G+A+  D   D HT   TE V  R YRAP+I+  
Sbjct: 165 VLHRDLKPSNLLLNT-TXDLKI-CDFGLARVADPDHD-HTGFLTEYVATRWYRAPEIMLN 221
Query: 117 RTNCFAAIDMWAV 129
                 +ID+W+V
Sbjct: 222 SKGYTKSIDIWSV 234

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 8/133 (6%)
Query: 1   MQEMMKSMSLWVHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARK 60
           + +++++ ++   K   +V + +  +L+K ++  H  + H I  FLY IL G+ Y H+  
Sbjct: 86  INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH-ICYFLYQILRGLKYIHSAN 144
Query: 61  IIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHT---TEMVILR-YRAPKILFG 116
           ++HRDL   NLL +     +KI  D G+A+  D   D HT   TE V  R YRAP+I+  
Sbjct: 145 VLHRDLKPSNLLLNT-TXDLKI-CDFGLARVADPDHD-HTGFLTEYVATRWYRAPEIMLN 201
Query: 117 RTNCFAAIDMWAV 129
                 +ID+W+V
Sbjct: 202 SKGYTKSIDIWSV 214

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 8/133 (6%)
Query: 1   MQEMMKSMSLWVHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARK 60
           + +++++ ++   K   +V + +  +L+K ++  H  + H I  FLY IL G+ Y H+  
Sbjct: 90  INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH-ICYFLYQILRGLKYIHSAN 148
Query: 61  IIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHT---TEMVILR-YRAPKILFG 116
           ++HRDL   NLL +     +KI  D G+A+  D   D HT   TE V  R YRAP+I+  
Sbjct: 149 VLHRDLKPSNLLLNT-TXDLKI-CDFGLARVADPDHD-HTGFLTEYVATRWYRAPEIMLN 205
Query: 117 RTNCFAAIDMWAV 129
                 +ID+W+V
Sbjct: 206 SKGYTKSIDIWSV 218

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 8/133 (6%)
Query: 1   MQEMMKSMSLWVHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARK 60
           + +++++ ++   K   +V + +  +L+K ++  H  + H I  FLY IL G+ Y H+  
Sbjct: 86  INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH-ICYFLYQILRGLKYIHSAN 144
Query: 61  IIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHT---TEMVILR-YRAPKILFG 116
           ++HRDL   NLL +     +KI  D G+A+  D   D HT   TE V  R YRAP+I+  
Sbjct: 145 VLHRDLKPSNLLLNT-TXDLKI-XDFGLARVADPDHD-HTGFLTEYVATRWYRAPEIMLN 201
Query: 117 RTNCFAAIDMWAV 129
                 +ID+W+V
Sbjct: 202 SKGYTKSIDIWSV 214

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 8/133 (6%)
Query: 1   MQEMMKSMSLWVHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARK 60
           + +++++ ++   K   +V + +  +L+K ++  H  + H I  FLY IL G+ Y H+  
Sbjct: 86  INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH-ICYFLYQILRGLKYIHSAN 144
Query: 61  IIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHT---TEMVILR-YRAPKILFG 116
           ++HRDL   NLL +     +KI  D G+A+  D   D HT   TE V  R YRAP+I+  
Sbjct: 145 VLHRDLKPSNLLLNT-TXDLKI-CDFGLARVADPDHD-HTGFLTEYVATRWYRAPEIMLN 201
Query: 117 RTNCFAAIDMWAV 129
                 +ID+W+V
Sbjct: 202 SKGYTKSIDIWSV 214

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 72/134 (53%), Gaps = 10/134 (7%)
Query: 1   MQEMMKSMSLWVHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARK 60
           + +++++ ++   K   +V + +  +L+K ++  H  + H I  FLY IL G+ Y H+  
Sbjct: 86  INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH-ICYFLYQILRGLKYIHSAN 144
Query: 61  IIHRDLTTMNLLADIENKTVKIA-ADSGMAKEIDAPFDAHT---TEMVILR-YRAPKILF 115
           ++HRDL   NLL    N T  +   D G+A+  D   D HT   TE V  R YRAP+I+ 
Sbjct: 145 VLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHD-HTGFLTEYVATRWYRAPEIML 200
Query: 116 GRTNCFAAIDMWAV 129
                  +ID+W+V
Sbjct: 201 NSKGYTKSIDIWSV 214

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 8/133 (6%)
Query: 1   MQEMMKSMSLWVHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARK 60
           + +++++ ++   K   +V + +  +L+K ++  H  + H I  FLY IL G+ Y H+  
Sbjct: 90  INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH-ICYFLYQILRGLKYIHSAN 148
Query: 61  IIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHT---TEMVILR-YRAPKILFG 116
           ++HRDL   NLL +     +KI  D G+A+  D   D HT   TE V  R YRAP+I+  
Sbjct: 149 VLHRDLKPSNLLLNT-TXDLKI-CDFGLARVADPDHD-HTGFLTEYVATRWYRAPEIMLN 205
Query: 117 RTNCFAAIDMWAV 129
                 +ID+W+V
Sbjct: 206 SKGYTKSIDIWSV 218

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 72/134 (53%), Gaps = 10/134 (7%)
Query: 1   MQEMMKSMSLWVHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARK 60
           + +++++ ++   K   +V + +  +L+K ++  H  + H I  FLY IL G+ Y H+  
Sbjct: 91  INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH-ICYFLYQILRGLKYIHSAN 149
Query: 61  IIHRDLTTMNLLADIENKTVKIA-ADSGMAKEIDAPFDAHT---TEMVILR-YRAPKILF 115
           ++HRDL   NLL    N T  +   D G+A+  D   D HT   TE V  R YRAP+I+ 
Sbjct: 150 VLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHD-HTGFLTEYVATRWYRAPEIML 205
Query: 116 GRTNCFAAIDMWAV 129
                  +ID+W+V
Sbjct: 206 NSKGYTKSIDIWSV 219

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 72/134 (53%), Gaps = 10/134 (7%)
Query: 1   MQEMMKSMSLWVHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARK 60
           + +++++ ++   K   +V + +  +L+K ++  H  + H I  FLY IL G+ Y H+  
Sbjct: 92  INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH-ICYFLYQILRGLKYIHSAN 150
Query: 61  IIHRDLTTMNLLADIENKTVKIA-ADSGMAKEIDAPFDAHT---TEMVILR-YRAPKILF 115
           ++HRDL   NLL    N T  +   D G+A+  D   D HT   TE V  R YRAP+I+ 
Sbjct: 151 VLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHD-HTGFLTEYVATRWYRAPEIML 206
Query: 116 GRTNCFAAIDMWAV 129
                  +ID+W+V
Sbjct: 207 NSKGYTKSIDIWSV 220

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 72/134 (53%), Gaps = 10/134 (7%)
Query: 1   MQEMMKSMSLWVHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARK 60
           + +++++ ++   K   +V + +  +L+K ++  H  + H I  FLY IL G+ Y H+  
Sbjct: 83  INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH-ICYFLYQILRGLKYIHSAN 141
Query: 61  IIHRDLTTMNLLADIENKTVKIA-ADSGMAKEIDAPFDAHT---TEMVILR-YRAPKILF 115
           ++HRDL   NLL    N T  +   D G+A+  D   D HT   TE V  R YRAP+I+ 
Sbjct: 142 VLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHD-HTGFLTEYVATRWYRAPEIML 197
Query: 116 GRTNCFAAIDMWAV 129
                  +ID+W+V
Sbjct: 198 NSKGYTKSIDIWSV 211

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 72/134 (53%), Gaps = 10/134 (7%)
Query: 1   MQEMMKSMSLWVHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARK 60
           + +++++ ++   K   +V + +  +L+K ++  H  + H I  FLY IL G+ Y H+  
Sbjct: 90  INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH-ICYFLYQILRGLKYIHSAN 148
Query: 61  IIHRDLTTMNLLADIENKTVKIA-ADSGMAKEIDAPFDAHT---TEMVILR-YRAPKILF 115
           ++HRDL   NLL    N T  +   D G+A+  D   D HT   TE V  R YRAP+I+ 
Sbjct: 149 VLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHD-HTGFLTEYVATRWYRAPEIML 204
Query: 116 GRTNCFAAIDMWAV 129
                  +ID+W+V
Sbjct: 205 NSKGYTKSIDIWSV 218

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 72/134 (53%), Gaps = 10/134 (7%)
Query: 1   MQEMMKSMSLWVHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARK 60
           + +++++ ++   K   +V + +  +L+K ++  H  + H I  FLY IL G+ Y H+  
Sbjct: 88  INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH-ICYFLYQILRGLKYIHSAN 146
Query: 61  IIHRDLTTMNLLADIENKTVKIA-ADSGMAKEIDAPFDAHT---TEMVILR-YRAPKILF 115
           ++HRDL   NLL    N T  +   D G+A+  D   D HT   TE V  R YRAP+I+ 
Sbjct: 147 VLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHD-HTGFLTEYVATRWYRAPEIML 202
Query: 116 GRTNCFAAIDMWAV 129
                  +ID+W+V
Sbjct: 203 NSKGYTKSIDIWSV 216

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 72/134 (53%), Gaps = 10/134 (7%)
Query: 1   MQEMMKSMSLWVHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARK 60
           + +++++ ++   K   +V + +  +L+K ++  H  + H I  FLY IL G+ Y H+  
Sbjct: 88  INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH-ICYFLYQILRGLKYIHSAN 146
Query: 61  IIHRDLTTMNLLADIENKTVKIA-ADSGMAKEIDAPFDAHT---TEMVILR-YRAPKILF 115
           ++HRDL   NLL    N T  +   D G+A+  D   D HT   TE V  R YRAP+I+ 
Sbjct: 147 VLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHD-HTGFLTEYVATRWYRAPEIML 202
Query: 116 GRTNCFAAIDMWAV 129
                  +ID+W+V
Sbjct: 203 NSKGYTKSIDIWSV 216

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 72/134 (53%), Gaps = 10/134 (7%)
Query: 1   MQEMMKSMSLWVHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARK 60
           + +++++ ++   K   +V + +  +L+K ++  H  + H I  FLY IL G+ Y H+  
Sbjct: 84  INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH-ICYFLYQILRGLKYIHSAN 142
Query: 61  IIHRDLTTMNLLADIENKTVKIA-ADSGMAKEIDAPFDAHT---TEMVILR-YRAPKILF 115
           ++HRDL   NLL    N T  +   D G+A+  D   D HT   TE V  R YRAP+I+ 
Sbjct: 143 VLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHD-HTGFLTEYVATRWYRAPEIML 198
Query: 116 GRTNCFAAIDMWAV 129
                  +ID+W+V
Sbjct: 199 NSKGYTKSIDIWSV 212

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 72/134 (53%), Gaps = 10/134 (7%)
Query: 1   MQEMMKSMSLWVHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARK 60
           + +++++ ++   K   +V + +  +L+K ++  H  + H I  FLY IL G+ Y H+  
Sbjct: 106 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH-ICYFLYQILRGLKYIHSAN 164
Query: 61  IIHRDLTTMNLLADIENKTVKIA-ADSGMAKEIDAPFDAHT---TEMVILR-YRAPKILF 115
           ++HRDL   NLL    N T  +   D G+A+  D   D HT   TE V  R YRAP+I+ 
Sbjct: 165 VLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHD-HTGFLTEYVATRWYRAPEIML 220
Query: 116 GRTNCFAAIDMWAV 129
                  +ID+W+V
Sbjct: 221 NSKGYTKSIDIWSV 234

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 72/134 (53%), Gaps = 10/134 (7%)
Query: 1   MQEMMKSMSLWVHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARK 60
           + +++++ ++   K   +V + +  +L+K ++  H  + H I  FLY IL G+ Y H+  
Sbjct: 84  INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH-ICYFLYQILRGLKYIHSAN 142
Query: 61  IIHRDLTTMNLLADIENKTVKIA-ADSGMAKEIDAPFDAHT---TEMVILR-YRAPKILF 115
           ++HRDL   NLL    N T  +   D G+A+  D   D HT   TE V  R YRAP+I+ 
Sbjct: 143 VLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHD-HTGFLTEYVATRWYRAPEIML 198
Query: 116 GRTNCFAAIDMWAV 129
                  +ID+W+V
Sbjct: 199 NSKGYTKSIDIWSV 212

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 72/134 (53%), Gaps = 10/134 (7%)
Query: 1   MQEMMKSMSLWVHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARK 60
           + +++++ ++   K   +V + +  +L+K ++  H  + H I  FLY IL G+ Y H+  
Sbjct: 94  INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH-ICYFLYQILRGLKYIHSAN 152
Query: 61  IIHRDLTTMNLLADIENKTVKIA-ADSGMAKEIDAPFDAHT---TEMVILR-YRAPKILF 115
           ++HRDL   NLL    N T  +   D G+A+  D   D HT   TE V  R YRAP+I+ 
Sbjct: 153 VLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHD-HTGFLTEYVATRWYRAPEIML 208
Query: 116 GRTNCFAAIDMWAV 129
                  +ID+W+V
Sbjct: 209 NSKGYTKSIDIWSV 222

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 72/134 (53%), Gaps = 10/134 (7%)
Query: 1   MQEMMKSMSLWVHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARK 60
           + +++++ ++   K   +V + +  +L+K ++  H  + H I  FLY IL G+ Y H+  
Sbjct: 86  INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH-ICYFLYQILRGLKYIHSAN 144
Query: 61  IIHRDLTTMNLLADIENKTVKIA-ADSGMAKEIDAPFDAHT---TEMVILR-YRAPKILF 115
           ++HRDL   NLL    N T  +   D G+A+  D   D HT   TE V  R YRAP+I+ 
Sbjct: 145 VLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHD-HTGFLTEYVATRWYRAPEIML 200
Query: 116 GRTNCFAAIDMWAV 129
                  +ID+W+V
Sbjct: 201 NSKGYTKSIDIWSV 214

>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC Length = 405

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 51/95 (53%), Gaps = 7/95 (7%)
Query: 41  LIKKFLYCILSGISYCHARKIIHRDLTTMNLLA---DIENKTVKIAADSGMAKEIDAPFD 97
           ++K  LY IL GI Y HA  ++HRDL   N+L      E   VKI AD G A+  ++P  
Sbjct: 129 MVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKI-ADMGFARLFNSPLK 187
Query: 98  AHT---TEMVILRYRAPKILFGRTNCFAAIDMWAV 129
                   +V   YRAP++L G  +   AID+WA+
Sbjct: 188 PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAI 222

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 6/116 (5%)
Query: 17  NLVFEYVNINLHKFIQQYHPMDSHL----IKKFLYCILSGISYCHARKIIHRDLTTMNLL 72
           NLV +YV   +++  + Y      L    +K ++Y +   ++Y H+  I HRD+   NLL
Sbjct: 96  NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 155
Query: 73  ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWA 128
            D +   +K+  D G AK++    + + + +    YRAP+++FG T+  ++ID+W+
Sbjct: 156 LDPDTAVLKL-CDFGSAKQL-VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWS 209

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 72/134 (53%), Gaps = 10/134 (7%)
Query: 1   MQEMMKSMSLWVHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARK 60
           + +++++ ++   K   +V + +  +L+K ++  H  + H I  FLY IL G+ Y H+  
Sbjct: 90  INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH-ICYFLYQILRGLKYIHSAN 148
Query: 61  IIHRDLTTMNLLADIENKTVKIA-ADSGMAKEIDAPFDAHT---TEMVILR-YRAPKILF 115
           ++HRDL   NLL    N T  +   D G+A+  D   D HT   TE V  R YRAP+I+ 
Sbjct: 149 VLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHD-HTGFLTEYVATRWYRAPEIML 204
Query: 116 GRTNCFAAIDMWAV 129
                  +ID+W+V
Sbjct: 205 NSKGYTKSIDIWSV 218

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 6/116 (5%)
Query: 17  NLVFEYVNINLHKFIQQYHPMDSHL----IKKFLYCILSGISYCHARKIIHRDLTTMNLL 72
           NLV +YV   +++  + Y      L    +K ++Y +   ++Y H+  I HRD+   NLL
Sbjct: 95  NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 154
Query: 73  ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWA 128
            D +   +K+  D G AK++    + + + +    YRAP+++FG T+  ++ID+W+
Sbjct: 155 LDPDTAVLKL-CDFGSAKQL-VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWS 208

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 6/116 (5%)
Query: 17  NLVFEYVNINLHKFIQQYHPMDSHL----IKKFLYCILSGISYCHARKIIHRDLTTMNLL 72
           NLV +YV   +++  + Y      L    +K ++Y +   ++Y H+  I HRD+   NLL
Sbjct: 95  NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 154
Query: 73  ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWA 128
            D +   +K+  D G AK++    + + + +    YRAP+++FG T+  ++ID+W+
Sbjct: 155 LDPDTAVLKL-CDFGSAKQL-VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWS 208

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 42/115 (36%), Positives = 64/115 (55%), Gaps = 6/115 (5%)
Query: 17  NLVFEYVNINLHKFIQQYHP--MDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
            LVFE+V+ +L  ++ +  P  + +  IK  +   L G+ + HA  I+HRDL   N+L  
Sbjct: 95  TLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILV- 153
Query: 75  IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
               TVK+ AD G+A+ I +   A T  +V L YRAP++L   T     +DMW+V
Sbjct: 154 TSGGTVKL-ADFGLAR-IYSYQMALTPVVVTLWYRAPEVLLQSTYA-TPVDMWSV 205

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 6/116 (5%)
Query: 17  NLVFEYVNINLHKFIQQYHPMDSHL----IKKFLYCILSGISYCHARKIIHRDLTTMNLL 72
           NLV +YV   +++  + Y      L    +K ++Y +   ++Y H+  I HRD+   NLL
Sbjct: 95  NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 154
Query: 73  ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWA 128
            D +   +K+  D G AK++    + + + +    YRAP+++FG T+  ++ID+W+
Sbjct: 155 LDPDTAVLKL-CDFGSAKQL-VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWS 208

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 6/116 (5%)
Query: 17  NLVFEYVNINLHKFIQQYHPMDSHL----IKKFLYCILSGISYCHARKIIHRDLTTMNLL 72
           NLV +YV   +++  + Y      L    +K ++Y +   ++Y H+  I HRD+   NLL
Sbjct: 99  NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 158
Query: 73  ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWA 128
            D +   +K+  D G AK++    + + + +    YRAP+++FG T+  ++ID+W+
Sbjct: 159 LDPDTAVLKL-CDFGSAKQL-VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWS 212

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 64/117 (54%), Gaps = 6/117 (5%)
Query: 17  NLVFEYVNINLHKFIQQYHPMDSHL----IKKFLYCILSGISYCHARKIIHRDLTTMNLL 72
           NLV +YV   +++  + Y      L    +K ++Y +   ++Y H+  I HRD+   NLL
Sbjct: 107 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 166
Query: 73  ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            D +   +K+  D G AK++    + + + +    YRAP+++FG T+  ++ID+W+ 
Sbjct: 167 LDPDTAVLKL-CDFGSAKQL-VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSA 221

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 6/116 (5%)
Query: 17  NLVFEYVNINLHKFIQQYHPMDSHL----IKKFLYCILSGISYCHARKIIHRDLTTMNLL 72
           NLV +YV   +++  + Y      L    +K ++Y +   ++Y H+  I HRD+   NLL
Sbjct: 114 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 173
Query: 73  ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWA 128
            D +   +K+  D G AK++    + + + +    YRAP+++FG T+  ++ID+W+
Sbjct: 174 LDPDTAVLKL-CDFGSAKQL-VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWS 227

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 64/117 (54%), Gaps = 6/117 (5%)
Query: 17  NLVFEYVNINLHKFIQQYHPMDSHL----IKKFLYCILSGISYCHARKIIHRDLTTMNLL 72
           NLV +YV   +++  + Y      L    +K ++Y +   ++Y H+  I HRD+   NLL
Sbjct: 107 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 166
Query: 73  ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            D +   +K+  D G AK++    + + + +    YRAP+++FG T+  ++ID+W+ 
Sbjct: 167 LDPDTAVLKL-CDFGSAKQL-VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSA 221

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 6/116 (5%)
Query: 17  NLVFEYVNINLHKFIQQYHPMDSHL----IKKFLYCILSGISYCHARKIIHRDLTTMNLL 72
           NLV +YV   +++  + Y      L    +K ++Y +   ++Y H+  I HRD+   NLL
Sbjct: 103 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 162
Query: 73  ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWA 128
            D +   +K+  D G AK++    + + + +    YRAP+++FG T+  ++ID+W+
Sbjct: 163 LDPDTAVLKL-CDFGSAKQL-VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWS 216

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 72/134 (53%), Gaps = 10/134 (7%)
Query: 1   MQEMMKSMSLWVHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARK 60
           +++++++ +L   +   +V + +  +L+K ++     + H I  FLY IL G+ Y H+  
Sbjct: 106 IRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDH-ICYFLYQILRGLKYIHSAN 164
Query: 61  IIHRDLTTMNLLADIENKTVKIA-ADSGMAKEIDAPFDAHT---TEMVILR-YRAPKILF 115
           ++HRDL   NLL    N T  +   D G+A+  D   D HT   TE V  R YRAP+I+ 
Sbjct: 165 VLHRDLKPSNLLI---NTTCDLKICDFGLARIADPEHD-HTGFLTEXVATRWYRAPEIML 220
Query: 116 GRTNCFAAIDMWAV 129
                  +ID+W+V
Sbjct: 221 NSKGYTKSIDIWSV 234

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 6/116 (5%)
Query: 17  NLVFEYVNINLHKFIQQYHPMDSHL----IKKFLYCILSGISYCHARKIIHRDLTTMNLL 72
           NLV +YV   +++  + Y      L    +K ++Y +   ++Y H+  I HRD+   NLL
Sbjct: 95  NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 154
Query: 73  ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWA 128
            D +   +K+  D G AK++    + + + +    YRAP+++FG T+  ++ID+W+
Sbjct: 155 LDPDTAVLKL-CDFGSAKQL-VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWS 208

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 6/116 (5%)
Query: 17  NLVFEYVNINLHKFIQQYHPMDSHL----IKKFLYCILSGISYCHARKIIHRDLTTMNLL 72
           NLV +YV   +++  + Y      L    +K ++Y +   ++Y H+  I HRD+   NLL
Sbjct: 95  NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 154
Query: 73  ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWA 128
            D +   +K+  D G AK++    + + + +    YRAP+++FG T+  ++ID+W+
Sbjct: 155 LDPDTAVLKL-CDFGSAKQL-VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWS 208

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 6/116 (5%)
Query: 17  NLVFEYVNINLHKFIQQYHPMDSHL----IKKFLYCILSGISYCHARKIIHRDLTTMNLL 72
           NLV +YV   +++  + Y      L    +K ++Y +   ++Y H+  I HRD+   NLL
Sbjct: 95  NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 154
Query: 73  ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWA 128
            D +   +K+  D G AK++    + + + +    YRAP+++FG T+  ++ID+W+
Sbjct: 155 LDPDTAVLKL-CDFGSAKQL-VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWS 208

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 64/117 (54%), Gaps = 6/117 (5%)
Query: 17  NLVFEYVNINLHKFIQQYHPMDSHL----IKKFLYCILSGISYCHARKIIHRDLTTMNLL 72
           NLV +YV   +++  + Y      L    +K ++Y +   ++Y H+  I HRD+   NLL
Sbjct: 108 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 167
Query: 73  ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            D +   +K+  D G AK++    + + + +    YRAP+++FG T+  ++ID+W+ 
Sbjct: 168 LDPDTAVLKL-CDFGSAKQL-VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSA 222

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 72/134 (53%), Gaps = 10/134 (7%)
Query: 1   MQEMMKSMSLWVHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARK 60
           + +++++ ++   K   +V + +  +L+K ++  H  + H I  FLY IL G+ Y H+  
Sbjct: 90  INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDH-ICYFLYQILRGLKYIHSAN 148
Query: 61  IIHRDLTTMNLLADIENKTVKIA-ADSGMAKEIDAPFDAHT---TEMVILR-YRAPKILF 115
           ++HRDL   NLL    N T  +   D G+A+  D   D HT   TE V  R YRAP+I+ 
Sbjct: 149 VLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHD-HTGFLTEYVATRWYRAPEIML 204
Query: 116 GRTNCFAAIDMWAV 129
                  +ID+W+V
Sbjct: 205 NSKGYTKSIDIWSV 218

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 64/117 (54%), Gaps = 6/117 (5%)
Query: 17  NLVFEYVNINLHKFIQQYHPMDSHL----IKKFLYCILSGISYCHARKIIHRDLTTMNLL 72
           NLV +YV   +++  + Y      L    +K ++Y +   ++Y H+  I HRD+   NLL
Sbjct: 100 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 159
Query: 73  ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            D +   +K+  D G AK++    + + + +    YRAP+++FG T+  ++ID+W+ 
Sbjct: 160 LDPDTAVLKL-CDFGSAKQL-VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSA 214

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 71/134 (52%), Gaps = 10/134 (7%)
Query: 1   MQEMMKSMSLWVHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARK 60
           + +++++ ++   K   +V + +  +L+K ++  H  + H I  FLY IL G+ Y H+  
Sbjct: 90  INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH-ICYFLYQILRGLKYIHSAN 148
Query: 61  IIHRDLTTMNLLADIENKTVKIA-ADSGMAKEIDAPFDAHTT---EMVILR-YRAPKILF 115
           ++HRDL   NLL    N T  +   D G+A+  D   D HT    E V  R YRAP+I+ 
Sbjct: 149 VLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHD-HTGFLXEXVATRWYRAPEIML 204
Query: 116 GRTNCFAAIDMWAV 129
                  +ID+W+V
Sbjct: 205 NSKGYTKSIDIWSV 218

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 71/134 (52%), Gaps = 10/134 (7%)
Query: 1   MQEMMKSMSLWVHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARK 60
           + +++++ ++   K   +V + +  +L+K ++  H  + H I  FLY IL G+ Y H+  
Sbjct: 91  INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH-ICYFLYQILRGLKYIHSAN 149
Query: 61  IIHRDLTTMNLLADIENKTVKIA-ADSGMAKEIDAPFDAHTT---EMVILR-YRAPKILF 115
           ++HRDL   NLL    N T  +   D G+A+  D   D HT    E V  R YRAP+I+ 
Sbjct: 150 VLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHD-HTGFLXEXVATRWYRAPEIML 205
Query: 116 GRTNCFAAIDMWAV 129
                  +ID+W+V
Sbjct: 206 NSKGYTKSIDIWSV 219

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 6/115 (5%)
Query: 17  NLVFEYVNINLHKFIQQYHP--MDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
            LVFE+V+ +L  ++ +  P  + +  IK  +   L G+ + HA  I+HRDL   N+L  
Sbjct: 87  TLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILV- 145
Query: 75  IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
               TVK+ AD G+A+ I +   A    +V L YRAP++L   T     +DMW+V
Sbjct: 146 TSGGTVKL-ADFGLAR-IYSYQMALAPVVVTLWYRAPEVLLQSTYA-TPVDMWSV 197

>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 8/119 (6%)
Query: 17  NLVFEYVNINLHKFIQQYH----PMDSHLIKKFLYCILSGISYCH--ARKIIHRDLTTMN 70
           N+V EYV   LH+  + Y+         LIK FL+ ++  I   H  +  + HRD+   N
Sbjct: 102 NVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHN 161
Query: 71  LLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           +L +  + T+K+  D G AK++ +P + +   +    YRAP+++FG  +   A+D+W+V
Sbjct: 162 VLVNEADGTLKLC-DFGSAKKL-SPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSV 218

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 61/120 (50%), Gaps = 8/120 (6%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           +V EY    L  +I +   M     ++F   I+  I YCH  KI+HRDL   NLL D +N
Sbjct: 86  MVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLD-DN 144
Query: 78  KTVKIAADSGMAKEI-DAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWA---VLYLL 133
             VKI AD G++  + D  F    T      Y AP+++ G+      +D+W+   VLY++
Sbjct: 145 LNVKI-ADFGLSNIMTDGNF--LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVM 201

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 6/115 (5%)
Query: 17  NLVFEYVNINLHKFIQQYHP--MDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
            LVFE+V+ +L  ++ +  P  + +  IK  +   L G+ + HA  I+HRDL   N+L  
Sbjct: 87  TLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILV- 145
Query: 75  IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
               TVK+ AD G+A+ I +   A    +V L YRAP++L   T     +DMW+V
Sbjct: 146 TSGGTVKL-ADFGLAR-IYSYQMALDPVVVTLWYRAPEVLLQSTYA-TPVDMWSV 197

>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein Kinase Ck2alpha Prime With A Potent Indazole-Derivative Inhibitor Length = 339

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 62/118 (52%), Gaps = 4/118 (3%)
Query: 12  VHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNL 71
           V K   LVFEY+N     F Q Y  +    I+ ++Y +L  + YCH++ I+HRD+   N+
Sbjct: 111 VSKTPALVFEYINNT--DFKQLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNV 168
Query: 72  LADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           + D + K +++  D G+A E   P   +   +    ++ P++L        ++DMW++
Sbjct: 169 MIDHQQKKLRL-IDWGLA-EFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSL 224

>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase Ck2alpha With Altered Cosubstrate Specificity Length = 335

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 63/118 (53%), Gaps = 4/118 (3%)
Query: 12  VHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNL 71
           V +   LVFE+VN     F Q Y  +  + I+ ++Y IL  + YCH+  I+HRD+   N+
Sbjct: 105 VSRTPALVFEHVNNT--DFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNV 162
Query: 72  LADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           L D E++ +++  D G+A E   P   +   +    ++ P++L        ++DMW++
Sbjct: 163 LIDHEHRKLRL-IDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSL 218

>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo Sapiens Length = 350

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 62/118 (52%), Gaps = 4/118 (3%)
Query: 12  VHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNL 71
           V K   LVFEY+N     F Q Y  +    I+ ++Y +L  + YCH++ I+HRD+   N+
Sbjct: 106 VSKTPALVFEYINNT--DFKQLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNV 163
Query: 72  LADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           + D + K +++  D G+A E   P   +   +    ++ P++L        ++DMW++
Sbjct: 164 MIDHQQKKLRL-IDWGLA-EFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSL 219

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 6/115 (5%)
Query: 17  NLVFEYVNINLHKFIQQYHP--MDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
            LVFE+V+ +L  ++ +  P  + +  IK  +   L G+ + HA  I+HRDL   N+L  
Sbjct: 87  TLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILV- 145
Query: 75  IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
               TVK+ AD G+A+ I +   A    +V L YRAP++L   T     +DMW+V
Sbjct: 146 TSGGTVKL-ADFGLAR-IYSYQMALFPVVVTLWYRAPEVLLQSTYA-TPVDMWSV 197

>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With Ellagic Acid Length = 340

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 63/118 (53%), Gaps = 4/118 (3%)
Query: 12  VHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNL 71
           V +   LVFE+VN     F Q Y  +  + I+ ++Y IL  + YCH+  I+HRD+   N+
Sbjct: 110 VSRTPALVFEHVNNT--DFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNV 167
Query: 72  LADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           + D E++ +++  D G+A E   P   +   +    ++ P++L        ++DMW++
Sbjct: 168 MIDHEHRKLRL-IDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSL 223

>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D- Ribofuranosylbenzimidazole Length = 334

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 63/118 (53%), Gaps = 4/118 (3%)
Query: 12  VHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNL 71
           V +   LVFE+VN     F Q Y  +  + I+ ++Y IL  + YCH+  I+HRD+   N+
Sbjct: 105 VSRTPALVFEHVNNT--DFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNV 162
Query: 72  LADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           + D E++ +++  D G+A E   P   +   +    ++ P++L        ++DMW++
Sbjct: 163 MIDHEHRKLRL-IDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSL 218

>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945 Length = 333

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 63/118 (53%), Gaps = 4/118 (3%)
Query: 12  VHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNL 71
           V +   LVFE+VN     F Q Y  +  + I+ ++Y IL  + YCH+  I+HRD+   N+
Sbjct: 105 VSRTPALVFEHVNNT--DFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNV 162
Query: 72  LADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           + D E++ +++  D G+A E   P   +   +    ++ P++L        ++DMW++
Sbjct: 163 MIDHEHRKLRL-IDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSL 218

>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme Length = 337

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 63/118 (53%), Gaps = 4/118 (3%)
Query: 12  VHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNL 71
           V +   LVFE+VN     F Q Y  +  + I+ ++Y IL  + YCH+  I+HRD+   N+
Sbjct: 105 VSRTPALVFEHVNNT--DFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNV 162
Query: 72  LADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           + D E++ +++  D G+A E   P   +   +    ++ P++L        ++DMW++
Sbjct: 163 MIDHEHRKLRL-IDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSL 218

>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With The Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 63/118 (53%), Gaps = 4/118 (3%)
Query: 12  VHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNL 71
           V +   LVFE+VN     F Q Y  +  + I+ ++Y IL  + YCH+  I+HRD+   N+
Sbjct: 105 VSRTPALVFEHVNNT--DFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNV 162
Query: 72  LADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           + D E++ +++  D G+A E   P   +   +    ++ P++L        ++DMW++
Sbjct: 163 MIDHEHRKLRL-IDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSL 218

>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn Length = 330

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 63/118 (53%), Gaps = 4/118 (3%)
Query: 12  VHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNL 71
           V +   LVFE+VN     F Q Y  +  + I+ ++Y IL  + YCH+  I+HRD+   N+
Sbjct: 104 VSRTPALVFEHVNNT--DFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNV 161
Query: 72  LADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           + D E++ +++  D G+A E   P   +   +    ++ P++L        ++DMW++
Sbjct: 162 MIDHEHRKLRL-IDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSL 217

>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human Protein Kinase Ck2 Catalytic Subunit Length = 334

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 63/118 (53%), Gaps = 4/118 (3%)
Query: 12  VHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNL 71
           V +   LVFE+VN     F Q Y  +  + I+ ++Y IL  + YCH+  I+HRD+   N+
Sbjct: 104 VSRTPALVFEHVNNT--DFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNV 161
Query: 72  LADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           + D E++ +++  D G+A E   P   +   +    ++ P++L        ++DMW++
Sbjct: 162 MIDHEHRKLRL-IDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSL 217

>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane Derivative Inhibitor (Cpa) Length = 331

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 63/118 (53%), Gaps = 4/118 (3%)
Query: 12  VHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNL 71
           V +   LVFE+VN     F Q Y  +  + I+ ++Y IL  + YCH+  I+HRD+   N+
Sbjct: 105 VSRTPALVFEHVNNT--DFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNV 162
Query: 72  LADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           + D E++ +++  D G+A E   P   +   +    ++ P++L        ++DMW++
Sbjct: 163 MIDHEHRKLRL-IDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSL 218

>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 63/118 (53%), Gaps = 4/118 (3%)
Query: 12  VHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNL 71
           V +   LVFE+VN     F Q Y  +  + I+ ++Y IL  + YCH+  I+HRD+   N+
Sbjct: 105 VSRTPALVFEHVNNT--DFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNV 162
Query: 72  LADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           + D E++ +++  D G+A E   P   +   +    ++ P++L        ++DMW++
Sbjct: 163 MIDHEHRKLRL-IDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSL 218

>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With Emodin At Ph 8.5 Length = 336

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 63/118 (53%), Gaps = 4/118 (3%)
Query: 12  VHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNL 71
           V +   LVFE+VN     F Q Y  +  + I+ ++Y IL  + YCH+  I+HRD+   N+
Sbjct: 105 VSRTPALVFEHVNNT--DFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNV 162
Query: 72  LADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           + D E++ +++  D G+A E   P   +   +    ++ P++L        ++DMW++
Sbjct: 163 MIDHEHRKLRL-IDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSL 218

>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Apigenin Length = 326

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 64/116 (55%), Gaps = 4/116 (3%)
Query: 14  KRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLA 73
           K  +L+FEYVN    K +  Y  +  + I+ ++Y +L  + YCH++ I+HRD+   N++ 
Sbjct: 101 KTPSLIFEYVNNTDFKVL--YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
Query: 74  DIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           D E + +++  D G+A E   P   +   +    ++ P++L    +   ++DMW++
Sbjct: 159 DHELRKLRL-IDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSL 212

>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph 8.5 Length = 328

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 63/118 (53%), Gaps = 4/118 (3%)
Query: 12  VHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNL 71
           V +   LVFE+VN     F Q Y  +  + I+ ++Y IL  + YCH+  I+HRD+   N+
Sbjct: 103 VSRTPALVFEHVNNT--DFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNV 160
Query: 72  LADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           + D E++ +++  D G+A E   P   +   +    ++ P++L        ++DMW++
Sbjct: 161 MIDHEHRKLRL-IDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSL 216

>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Luteolin Length = 326

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 64/116 (55%), Gaps = 4/116 (3%)
Query: 14  KRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLA 73
           K  +L+FEYVN    K +  Y  +  + I+ ++Y +L  + YCH++ I+HRD+   N++ 
Sbjct: 101 KTPSLIFEYVNNTDFKVL--YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
Query: 74  DIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           D E + +++  D G+A E   P   +   +    ++ P++L    +   ++DMW++
Sbjct: 159 DHELRKLRL-IDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSL 212

>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 63/118 (53%), Gaps = 4/118 (3%)
Query: 12  VHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNL 71
           V +   LVFE+VN     F Q Y  +  + I+ ++Y IL  + YCH+  I+HRD+   N+
Sbjct: 105 VSRTPALVFEHVNNT--DFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNV 162
Query: 72  LADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           + D E++ +++  D G+A E   P   +   +    ++ P++L        ++DMW++
Sbjct: 163 MIDHEHRKLRL-IDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSL 218

>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And Human Ck2alpha' In Complex With A Non-hydrolysable Atp-analogue Length = 349

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 63/118 (53%), Gaps = 4/118 (3%)
Query: 12  VHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNL 71
           V +   LVFE+VN     F Q Y  +  + I+ ++Y IL  + YCH+  I+HRD+   N+
Sbjct: 105 VSRTPALVFEHVNNT--DFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNV 162
Query: 72  LADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           + D E++ +++  D G+A E   P   +   +    ++ P++L        ++DMW++
Sbjct: 163 MIDHEHRKLRL-IDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSL 218

>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- AnthraquinoneCK2 KINASE COMPLEX Length = 325

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 64/116 (55%), Gaps = 4/116 (3%)
Query: 14  KRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLA 73
           K  +L+FEYVN    K +  Y  +  + I+ ++Y +L  + YCH++ I+HRD+   N++ 
Sbjct: 101 KTPSLIFEYVNNTDFKVL--YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
Query: 74  DIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           D E + +++  D G+A E   P   +   +    ++ P++L    +   ++DMW++
Sbjct: 159 DHELRKLRL-IDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSL 212

>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In Complex With The Inhibitor 3,4,5,6,7-Pentabromo-1h-Indazole (K64) Length = 327

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 64/116 (55%), Gaps = 4/116 (3%)
Query: 14  KRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLA 73
           K  +L+FEYVN    K +  Y  +  + I+ ++Y +L  + YCH++ I+HRD+   N++ 
Sbjct: 101 KTPSLIFEYVNNTDFKVL--YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
Query: 74  DIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           D E + +++  D G+A E   P   +   +    ++ P++L    +   ++DMW++
Sbjct: 159 DHELRKLRL-IDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSL 212

>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase Ck2 (Alpha-Subunit) And Mg-Amppnp Length = 327

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 64/116 (55%), Gaps = 4/116 (3%)
Query: 14  KRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLA 73
           K  +L+FEYVN    K +  Y  +  + I+ ++Y +L  + YCH++ I+HRD+   N++ 
Sbjct: 101 KTPSLIFEYVNNTDFKVL--YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
Query: 74  DIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           D E + +++  D G+A E   P   +   +    ++ P++L    +   ++DMW++
Sbjct: 159 DHELRKLRL-IDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSL 212

>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc Length = 332

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 64/116 (55%), Gaps = 4/116 (3%)
Query: 14  KRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLA 73
           K  +L+FEYVN    K +  Y  +  + I+ ++Y +L  + YCH++ I+HRD+   N++ 
Sbjct: 102 KTPSLIFEYVNNTDFKVL--YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 159
Query: 74  DIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           D E + +++  D G+A E   P   +   +    ++ P++L    +   ++DMW++
Sbjct: 160 DHELRKLRL-IDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSL 213

>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine Derivatives As Potent Inhibitors Of Protein Kinase Ck2 Length = 352

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 64/116 (55%), Gaps = 4/116 (3%)
Query: 14  KRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLA 73
           K  +L+FEYVN    K +  Y  +  + I+ ++Y +L  + YCH++ I+HRD+   N++ 
Sbjct: 122 KTPSLIFEYVNNTDFKVL--YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 179
Query: 74  DIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           D E + +++  D G+A E   P   +   +    ++ P++L    +   ++DMW++
Sbjct: 180 DHELRKLRL-IDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSL 233

>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex With The Inhibitor 4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68) Length = 331

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 64/116 (55%), Gaps = 4/116 (3%)
Query: 14  KRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLA 73
           K  +L+FEYVN    K +  Y  +  + I+ ++Y +L  + YCH++ I+HRD+   N++ 
Sbjct: 101 KTPSLIFEYVNNTDFKVL--YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
Query: 74  DIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           D E + +++  D G+A E   P   +   +    ++ P++L    +   ++DMW++
Sbjct: 159 DHELRKLRL-IDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSL 212

>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor Length = 335

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 64/116 (55%), Gaps = 4/116 (3%)
Query: 14  KRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLA 73
           K  +L+FEYVN    K +  Y  +  + I+ ++Y +L  + YCH++ I+HRD+   N++ 
Sbjct: 103 KTPSLIFEYVNNTDFKVL--YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 160
Query: 74  DIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           D E + +++  D G+A E   P   +   +    ++ P++L    +   ++DMW++
Sbjct: 161 DHELRKLRL-IDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSL 214

>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex With Two Beta Peptides Mimicking The Architecture Of The Tetrameric Protein Kinase Ck2 Holoenzyme. Length = 332

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 64/116 (55%), Gaps = 4/116 (3%)
Query: 14  KRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLA 73
           K  +L+FEYVN    K +  Y  +  + I+ ++Y +L  + YCH++ I+HRD+   N++ 
Sbjct: 102 KTPSLIFEYVNNTDFKVL--YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 159
Query: 74  DIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           D E + +++  D G+A E   P   +   +    ++ P++L    +   ++DMW++
Sbjct: 160 DHELRKLRL-IDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSL 213

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 70/115 (60%), Gaps = 6/115 (5%)
Query: 17  NLVFEYVNINLHKFIQQY-HP-MDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
            LVFE+V+ +L  ++ +   P + +  IK  ++ +L G+ + H+ +++HRDL   N+L  
Sbjct: 95  TLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV- 153
Query: 75  IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +  +K+ AD G+A+ I +   A T+ +V L YRAP++L  +++    +D+W+V
Sbjct: 154 TSSGQIKL-ADFGLAR-IYSFQMALTSVVVTLWYRAPEVLL-QSSYATPVDLWSV 205

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 70/115 (60%), Gaps = 6/115 (5%)
Query: 17  NLVFEYVNINLHKFIQQY-HP-MDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
            LVFE+V+ +L  ++ +   P + +  IK  ++ +L G+ + H+ +++HRDL   N+L  
Sbjct: 95  TLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV- 153
Query: 75  IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +  +K+ AD G+A+ I +   A T+ +V L YRAP++L  +++    +D+W+V
Sbjct: 154 TSSGQIKL-ADFGLAR-IYSFQMALTSVVVTLWYRAPEVLL-QSSYATPVDLWSV 205

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 70/115 (60%), Gaps = 6/115 (5%)
Query: 17  NLVFEYVNINLHKFIQQY-HP-MDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
            LVFE+V+ +L  ++ +   P + +  IK  ++ +L G+ + H+ +++HRDL   N+L  
Sbjct: 95  TLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV- 153
Query: 75  IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +  +K+ AD G+A+ I +   A T+ +V L YRAP++L  +++    +D+W+V
Sbjct: 154 TSSGQIKL-ADFGLAR-IYSFQMALTSVVVTLWYRAPEVLL-QSSYATPVDLWSV 205

>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme Length = 335

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 64/118 (54%), Gaps = 4/118 (3%)
Query: 12  VHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNL 71
           V +   LVFE+VN    K ++Q   +  + I+ ++Y IL  + YCH+  I+HRD+   N+
Sbjct: 105 VSRTPALVFEHVNNTDFKQLRQ--TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNV 162
Query: 72  LADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           + D E++ +++  D G+A E   P   +   +    ++ P++L        ++DMW++
Sbjct: 163 MIDHEHRKLRL-IDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSL 218

>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 60/113 (53%), Gaps = 8/113 (7%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV E ++ NL + IQ    +D   +   LY +L GI + H+  IIHRDL   N++    +
Sbjct: 106 LVMELMDANLXQVIQME--LDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVK-SD 162
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
            T+KI  D G+A+     F    T  V+ R YRAP+++ G       +D+W+V
Sbjct: 163 XTLKI-LDFGLARTAGTSF--MMTPYVVTRYYRAPEVILG-MGYKENVDIWSV 211

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 61/113 (53%), Gaps = 6/113 (5%)
Query: 18  LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           L+ EY  +  +++ +Q+    D      ++  + + +SYCH++++IHRD+   NLL    
Sbjct: 89  LILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG-S 147
Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           N  +KI AD G +  + AP    TT    L Y  P+++ GR +    +D+W++
Sbjct: 148 NGELKI-ADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHD-EKVDLWSL 196

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 104 LVTHLMGADLNNIVKXQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 161
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+  D   D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 162 XELKI-LDFGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 209

>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 60/113 (53%), Gaps = 8/113 (7%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV E ++ NL + IQ    +D   +   LY +L GI + H+  IIHRDL   N++    +
Sbjct: 106 LVMELMDANLXQVIQME--LDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVK-SD 162
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
            T+KI  D G+A+     F    T  V+ R YRAP+++ G       +D+W+V
Sbjct: 163 XTLKI-LDFGLARTAGTSF--MMTPYVVTRYYRAPEVILG-MGYKENVDIWSV 211

>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 60/113 (53%), Gaps = 8/113 (7%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV E ++ NL + IQ    +D   +   LY +L GI + H+  IIHRDL   N++    +
Sbjct: 99  LVMELMDANLXQVIQME--LDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVK-SD 155
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
            T+KI  D G+A+     F    T  V+ R YRAP+++ G       +D+W+V
Sbjct: 156 XTLKI-LDFGLARTAGTSF--MMTPYVVTRYYRAPEVILG-MGYKENVDIWSV 204

>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 60/113 (53%), Gaps = 8/113 (7%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV E ++ NL + IQ    +D   +   LY +L GI + H+  IIHRDL   N++    +
Sbjct: 106 LVMELMDANLXQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK-SD 162
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
            T+KI  D G+A+     F    T  V+ R YRAP+++ G       +D+W+V
Sbjct: 163 XTLKI-LDFGLARTAGTSF--MMTPYVVTRYYRAPEVILG-MGYKENVDIWSV 211

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 60/112 (53%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           +V E ++ NL + IQ    +D   +   LY +L GI + H+  IIHRDL   N++    +
Sbjct: 106 IVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK-SD 162
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            T+KI  D G+A+     F   T E+V   YRAP+++ G       +D+W+V
Sbjct: 163 CTLKI-LDFGLARTAGTSF-MMTPEVVTRYYRAPEVILG-MGYKENVDIWSV 211

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 8/113 (7%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           +V E ++ NL + IQ    +D   +   LY +L GI + H+  IIHRDL   N++    +
Sbjct: 106 IVMELMDANLSQVIQME--LDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVK-SD 162
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
            T+KI  D G+A+     F    T  V+ R YRAP+++ G       +D+W+V
Sbjct: 163 ATLKI-LDFGLARTAGTSF--MMTPYVVTRYYRAPEVILG-MGYKENVDIWSV 211

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 110 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 167
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+  D   D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 168 SELKI-LDFGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 215

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 161
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D+G+A+  D   D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 162 CELKI-LDAGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 209

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 60/113 (53%), Gaps = 8/113 (7%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV  ++  +L K ++ +  +    I+  +Y +L G+ Y HA  IIHRDL   NL  + E+
Sbjct: 107 LVMPFMGTDLGKLMK-HEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVN-ED 164
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A++ D+         V+ R YRAP+++         +D+W+V
Sbjct: 165 CELKI-LDFGLARQADSEMXG----XVVTRWYRAPEVILNWMRYTQTVDIWSV 212

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 106 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 163
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+  D   D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 164 SELKI-LDFGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 211

>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 29/115 (25%)
Query: 42  IKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHT- 100
           IK  LY +L G+ Y H+  I+HRDL   N L + ++ +VK+  D G+A+ +D P + ++ 
Sbjct: 158 IKTLLYNLLVGVKYVHSAGILHRDLKPANCLVN-QDCSVKV-CDFGLARTVDYPENGNSQ 215
Query: 101 -------------------------TEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
                                    T  V+ R YRAP+++  + N   AID+W++
Sbjct: 216 LPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSI 270

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 8/113 (7%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           +V E ++ NL + IQ    +D   +   LY +L GI + H+  IIHRDL   N++    +
Sbjct: 106 IVMELMDANLSQVIQME--LDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVK-SD 162
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
            T+KI  D G+A+     F    T  V+ R YRAP+++ G       +D+W+V
Sbjct: 163 ATLKI-LDFGLARTAGTSF--MMTPYVVTRYYRAPEVILG-MGYKENVDIWSV 211

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 8/113 (7%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           +V E ++ NL + IQ    +D   +   LY +L GI + H+  IIHRDL   N++    +
Sbjct: 106 IVMELMDANLSQVIQME--LDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVK-SD 162
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
            T+KI  D G+A+     F    T  V+ R YRAP+++ G       +D+W+V
Sbjct: 163 ATLKI-LDFGLARTAGTSF--MMTPYVVTRYYRAPEVILG-MGYKENVDIWSV 211

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 161
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+  D   D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 162 CELKI-LDGGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 209

>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 42  IKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEI----DAPFD 97
           IK+ +  +L+G+ Y H  KI+HRD+   N+L  I    V   AD G+A+      ++  +
Sbjct: 127 IKRVMQMLLNGLYYIHRNKILHRDMKAANVL--ITRDGVLKLADFGLARAFSLAKNSQPN 184
Query: 98  AHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            +   +V L YR P++L G  +    ID+W  
Sbjct: 185 RYXNRVVTLWYRPPELLLGERDYGPPIDLWGA 216

>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 42  IKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEI----DAPFD 97
           IK+ +  +L+G+ Y H  KI+HRD+   N+L  I    V   AD G+A+      ++  +
Sbjct: 126 IKRVMQMLLNGLYYIHRNKILHRDMKAANVL--ITRDGVLKLADFGLARAFSLAKNSQPN 183
Query: 98  AHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            +   +V L YR P++L G  +    ID+W  
Sbjct: 184 RYXNRVVTLWYRPPELLLGERDYGPPIDLWGA 215

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 8/113 (7%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           +V E ++ NL + IQ    +D   +   LY +L GI + H+  IIHRDL   N++    +
Sbjct: 106 IVMELMDANLSQVIQME--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK-SD 162
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
            T+KI  D G+A+     F    T  V+ R YRAP+++ G       +D+W+V
Sbjct: 163 ATLKI-LDFGLARTAGTSF--MMTPYVVTRYYRAPEVILG-MGYKENVDIWSV 211

>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 42  IKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEI----DAPFD 97
           IK+ +  +L+G+ Y H  KI+HRD+   N+L  I    V   AD G+A+      ++  +
Sbjct: 127 IKRVMQMLLNGLYYIHRNKILHRDMKAANVL--ITRDGVLKLADFGLARAFSLAKNSQPN 184
Query: 98  AHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            +   +V L YR P++L G  +    ID+W  
Sbjct: 185 RYXNRVVTLWYRPPELLLGERDYGPPIDLWGA 216

>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 42  IKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEI----DAPFD 97
           IK+ +  +L+G+ Y H  KI+HRD+   N+L  I    V   AD G+A+      ++  +
Sbjct: 127 IKRVMQMLLNGLYYIHRNKILHRDMKAANVL--ITRDGVLKLADFGLARAFSLAKNSQPN 184
Query: 98  AHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            +   +V L YR P++L G  +    ID+W  
Sbjct: 185 RYXNRVVTLWYRPPELLLGERDYGPPIDLWGA 216

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 104 LVTHLMGADLNNIVKXQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 161
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+  D   D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 162 CELKI-LDFGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 209

>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 60/113 (53%), Gaps = 8/113 (7%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV E ++ NL + IQ    +D   +   LY +L GI + H+  IIHRDL   N++    +
Sbjct: 106 LVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK-SD 162
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
            T+KI  D G+A+     F    T  V+ R YRAP+++ G       +D+W+V
Sbjct: 163 XTLKI-LDFGLARTAGTSF--MMTPYVVTRYYRAPEVILG-MGYKENVDIWSV 211

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 115 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 172
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+  D   D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 173 XELKI-LDFGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 220

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 8/113 (7%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           +V E ++ NL + IQ    +D   +   LY +L GI + H+  IIHRDL   N++    +
Sbjct: 106 IVMELMDANLSQVIQME--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK-SD 162
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
            T+KI  D G+A+     F    T  V+ R YRAP+++ G       +D+W+V
Sbjct: 163 ATLKI-LDFGLARTAGTSF--MMTPYVVTRYYRAPEVILG-MGYKENVDIWSV 211

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 109 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 166
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+  D   D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 167 XELKI-LDFGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 214

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 109 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 166
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+  D   D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 167 XELKI-LDFGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 214

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 104 LVTHLMGADLNNIVKSQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 161
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+ +  D   D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 162 SELKI-LDFGLCRHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 209

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 161
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+  D   D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 162 CELKI-LDRGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 209

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 61/113 (53%), Gaps = 6/113 (5%)
Query: 18  LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           L+ EY  +  +++ +Q+    D      ++  + + +SYCH++++IHRD+   NLL    
Sbjct: 111 LILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA 170
Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            + +KI AD G +  + AP    TT    L Y  P+++ GR +    +D+W++
Sbjct: 171 GE-LKI-ADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHD-EKVDLWSL 218

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 161
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+  D   D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 162 CELKI-LDFGLARHTD---DEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSV 209

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 61/113 (53%), Gaps = 6/113 (5%)
Query: 18  LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           L+ EY  +  +++ +Q+    D      ++  + + +SYCH++++IHRD+   NLL    
Sbjct: 88  LILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA 147
Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            + +KI AD G +  + AP    TT    L Y  P+++ GR +    +D+W++
Sbjct: 148 GE-LKI-ADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHD-EKVDLWSL 195

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 61/113 (53%), Gaps = 6/113 (5%)
Query: 18  LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           L+ EY  +  +++ +Q+    D      ++  + + +SYCH++++IHRD+   NLL    
Sbjct: 102 LILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA 161
Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            + +KI AD G +  + AP    TT    L Y  P+++ GR +    +D+W++
Sbjct: 162 GE-LKI-ADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHD-EKVDLWSL 209

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 61/113 (53%), Gaps = 6/113 (5%)
Query: 18  LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           L+ EY  +  +++ +Q+    D      ++  + + +SYCH++++IHRD+   NLL    
Sbjct: 88  LILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA 147
Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            + +KI AD G +  + AP    TT    L Y  P+++ GR +    +D+W++
Sbjct: 148 GE-LKI-ADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHD-EKVDLWSL 195

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 61/113 (53%), Gaps = 6/113 (5%)
Query: 18  LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           L+ EY  +  +++ +Q+    D      ++  + + +SYCH++++IHRD+   NLL    
Sbjct: 90  LILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA 149
Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            + +KI AD G +  + AP    TT    L Y  P+++ GR +    +D+W++
Sbjct: 150 GE-LKI-ADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHD-EKVDLWSL 197

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 61/113 (53%), Gaps = 6/113 (5%)
Query: 18  LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           L+ EY  +  +++ +Q+    D      ++  + + +SYCH++++IHRD+   NLL    
Sbjct: 84  LILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA 143
Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            + +KI AD G +  + AP    TT    L Y  P+++ GR +    +D+W++
Sbjct: 144 GE-LKI-ADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHD-EKVDLWSL 191

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 161
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+  D   D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 162 CELKI-LDFGLARHTD---DEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSV 209

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 61/113 (53%), Gaps = 6/113 (5%)
Query: 18  LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           L+ EY  +  +++ +Q+    D      ++  + + +SYCH++++IHRD+   NLL    
Sbjct: 89  LILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA 148
Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            + +KI AD G +  + AP    TT    L Y  P+++ GR +    +D+W++
Sbjct: 149 GE-LKI-ADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHD-EKVDLWSL 196

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 61/113 (53%), Gaps = 6/113 (5%)
Query: 18  LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           L+ EY  +  +++ +Q+    D      ++  + + +SYCH++++IHRD+   NLL    
Sbjct: 85  LILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA 144
Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            + +KI AD G +  + AP    TT    L Y  P+++ GR +    +D+W++
Sbjct: 145 GE-LKI-ADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHD-EKVDLWSL 192

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 61/113 (53%), Gaps = 6/113 (5%)
Query: 18  LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           L+ EY  +  +++ +Q+    D      ++  + + +SYCH++++IHRD+   NLL    
Sbjct: 82  LILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA 141
Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            + +KI AD G +  + AP    TT    L Y  P+++ GR +    +D+W++
Sbjct: 142 GE-LKI-ADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHD-EKVDLWSL 189

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 60/113 (53%), Gaps = 6/113 (5%)
Query: 18  LVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           L+ EY     ++K +Q+    D      ++  + + +SYCH++++IHRD+   NLL    
Sbjct: 90  LILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA 149
Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            + +KI AD G +  + AP    TT    L Y  P+++ GR +    +D+W++
Sbjct: 150 GE-LKI-ADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHD-EKVDLWSL 197

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 60/113 (53%), Gaps = 6/113 (5%)
Query: 18  LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           L+ EY  +  +++ +Q+    D      ++  + + +SYCH++++IHRD+   NLL    
Sbjct: 90  LILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA 149
Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            + +KI AD G +  + AP    TT    L Y  P+ + GR +    +D+W++
Sbjct: 150 GE-LKI-ADFGWS--VHAPSSRRTTLCGTLDYLPPEXIEGRXHD-EKVDLWSL 197

>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 59/112 (52%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           +V E ++ NL + IQ    +D   +   LY +L GI + H+  IIHRDL   N++    +
Sbjct: 106 IVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK-SD 162
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            T+KI  D G+A+     F     E+V   YRAP+++ G       +D+W+V
Sbjct: 163 CTLKI-LDFGLARTAGTSF-MMEPEVVTRYYRAPEVILG-MGYKENVDLWSV 211

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 161
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+  D   D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 162 CELKI-LDYGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 209

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 60/113 (53%), Gaps = 6/113 (5%)
Query: 18  LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           L+ EY  +  +++ +Q+    D      ++  + + +SYCH++++IHRD+   NLL    
Sbjct: 89  LILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG-S 147
Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           N  +KI AD G +  + AP     T    L Y  P+++ GR +    +D+W++
Sbjct: 148 NGELKI-ADFGWS--VHAPSSRRDTLCGTLDYLPPEMIEGRMHD-EKVDLWSL 196

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 127 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 184
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+  D   D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 185 CELKI-LDFGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 232

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 110 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 167
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+  D   D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 168 CELKI-LDFGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 215

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 106 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 163
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+  D   D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 164 CELKI-LDFGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 211

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 110 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 167
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+  D   D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 168 CELKI-LDFGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 215

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 115 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 172
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+  D   D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 173 CELKI-LDFGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 220

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 116 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 173
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+  D   D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 174 CELKI-LDFGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 221

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 116 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 173
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+  D   D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 174 CELKI-LDFGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 221

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 101 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 158
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+  D   D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 159 CELKI-LDFGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 206

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 161
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+  D   D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 162 CELKI-LDFGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 209

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 161
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+  D   D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 162 CELKI-LDFGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 209

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 109 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 166
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+  D   D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 167 CELKI-LDFGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 214

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 116 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 173
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+  D   D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 174 CELKI-LDFGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 221

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 8/113 (7%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           +V E ++ NL + IQ    +D   +   LY +L GI + H+  IIHRDL   N++    +
Sbjct: 106 IVMELMDANLSQVIQME--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK-SD 162
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
            T+KI  D G+A+     F    T  V+ R YRAP+++ G       +D+W+V
Sbjct: 163 CTLKI-LDFGLARTAGTSF--MMTPYVVTRYYRAPEVILG-MGYKENVDIWSV 211

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 161
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+  D   D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 162 CELKI-LDFGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 209

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 161
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+  D   D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 162 CELKI-LDFGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 209

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 100 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 157
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+  D   D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 158 CELKI-LDFGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 205

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 123 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 180
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+  D   D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 181 CELKI-LDFGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 228

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 109 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 166
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+  D   D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 167 CELKI-LDFGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 214

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 102 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 159
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+  D   D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 160 CELKI-LDFGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 207

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 103 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 160
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+  D   D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 161 CELKI-LDFGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 208

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 100 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 157
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+  D   D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 158 CELKI-LDFGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 205

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 124 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 181
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+  D   D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 182 CELKI-LDFGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 229

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 161
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+  D   D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 162 CELKI-LDFGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 209

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 106 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 163
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+  D   D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 164 CELKI-LDFGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 211

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 101 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 158
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+  D   D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 159 CELKI-LDFGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 206

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 161
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+  D   D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 162 CELKI-LDFGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 209

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 124 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 181
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+  D   D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 182 CELKI-LDFGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 229

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 161
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+  D   D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 162 CELKI-LDFGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 209

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 110 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 167
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+  D   D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 168 CELKI-LDFGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 215

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 106 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 163
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+  D   D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 164 CELKI-LDFGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 211

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 161
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+  D   D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 162 CELKI-LDFGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 209

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 114 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 171
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+  D   D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 172 CELKI-LDFGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 219

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 111 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 168
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+  D   D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 169 CELKI-LDFGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 216

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 123 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 180
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+  D   D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 181 CELKI-LDFGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 228

>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 60/113 (53%), Gaps = 8/113 (7%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV E ++ NL + IQ    +D   +   LY +L GI + H+  IIHRDL   N++    +
Sbjct: 100 LVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK-SD 156
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
            T+KI  D G+A+     F    T  V+ R YRAP+++ G       +D+W+V
Sbjct: 157 CTLKI-LDFGLARTAGTSF--MMTPYVVTRYYRAPEVILG-MGYKENVDIWSV 205

>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 60/113 (53%), Gaps = 8/113 (7%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV E ++ NL + IQ    +D   +   LY +L GI + H+  IIHRDL   N++    +
Sbjct: 100 LVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK-SD 156
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
            T+KI  D G+A+     F    T  V+ R YRAP+++ G       +D+W+V
Sbjct: 157 CTLKI-LDFGLARTAGTSF--MMTPYVVTRYYRAPEVILG-MGYKENVDIWSV 205

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 36  PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAP 95
           P   +  + F++ I++G+ Y H+  I+HRDLT  NLL    N  +KI AD G+A ++  P
Sbjct: 108 PFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLL-TRNMNIKI-ADFGLATQLKMP 165
Query: 96  FDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            + H T      Y +P+I     +   + D+W++
Sbjct: 166 HEKHYTLCGTPNYISPEIATRSAHGLES-DVWSL 198

>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 60/113 (53%), Gaps = 8/113 (7%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV E ++ NL + IQ    +D   +   LY +L GI + H+  IIHRDL   N++    +
Sbjct: 106 LVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK-SD 162
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
            T+KI  D G+A+     F    T  V+ R YRAP+++ G       +D+W+V
Sbjct: 163 CTLKI-LDFGLARTAGTSF--MMTPYVVTRYYRAPEVILG-MGYKENVDIWSV 211

>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 60/113 (53%), Gaps = 8/113 (7%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV E ++ NL + IQ    +D   +   LY +L GI + H+  IIHRDL   N++    +
Sbjct: 99  LVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK-SD 155
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
            T+KI  D G+A+     F    T  V+ R YRAP+++ G       +D+W+V
Sbjct: 156 CTLKI-LDFGLARTAGTSF--MMTPYVVTRYYRAPEVILG-MGYKENVDIWSV 204

>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 59/112 (52%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           +V E ++ NL + IQ    +D   +   LY +L GI + H+  IIHRDL   N++    +
Sbjct: 106 IVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK-SD 162
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            T+KI  D G+A+     F     E+V   YRAP+++ G       +D+W+V
Sbjct: 163 CTLKI-LDFGLARTAGTSF-MMEPEVVTRYYRAPEVILG-MGYKENVDIWSV 211

>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 60/113 (53%), Gaps = 8/113 (7%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV E ++ NL + IQ    +D   +   LY +L GI + H+  IIHRDL   N++    +
Sbjct: 107 LVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK-SD 163
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
            T+KI  D G+A+     F    T  V+ R YRAP+++ G       +D+W+V
Sbjct: 164 CTLKI-LDFGLARTAGTSF--MMTPYVVTRYYRAPEVILG-MGYKENVDIWSV 212

>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 60/113 (53%), Gaps = 8/113 (7%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV E ++ NL + IQ    +D   +   LY +L GI + H+  IIHRDL   N++    +
Sbjct: 107 LVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK-SD 163
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
            T+KI  D G+A+     F    T  V+ R YRAP+++ G       +D+W+V
Sbjct: 164 CTLKI-LDFGLARTAGTSF--MMTPYVVTRYYRAPEVILG-MGYKENVDIWSV 212

>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 60/113 (53%), Gaps = 8/113 (7%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV E ++ NL + IQ    +D   +   LY +L GI + H+  IIHRDL   N++    +
Sbjct: 105 LVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK-SD 161
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
            T+KI  D G+A+     F    T  V+ R YRAP+++ G       +D+W+V
Sbjct: 162 CTLKI-LDFGLARTAGTSF--MMTPYVVTRYYRAPEVILG-MGYKENVDIWSV 210

>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 60/113 (53%), Gaps = 8/113 (7%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV E ++ NL + IQ    +D   +   LY +L GI + H+  IIHRDL   N++    +
Sbjct: 106 LVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK-SD 162
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
            T+KI  D G+A+     F    T  V+ R YRAP+++ G       +D+W+V
Sbjct: 163 CTLKI-LDFGLARTAGTSF--MMTPYVVTRYYRAPEVILG-MGYKENVDIWSV 211

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 100 LVTHLMGADLNNIVKCAKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 157
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+  D   D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 158 CELKI-LDFGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 205

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 9/121 (7%)
Query: 18  LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           +V EYV+   L  +I +   +D    ++    ILSG+ YCH   ++HRDL   N+L D  
Sbjct: 93  MVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDA- 151
Query: 77  NKTVKIAADSGMAKEI-DAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWA---VLYL 132
           +   KI AD G++  + D  F   +       Y AP+++ GR      +D+W+   +LY 
Sbjct: 152 HMNAKI-ADFGLSNMMSDGEFLRXSCGSP--NYAAPEVISGRLYAGPEVDIWSSGVILYA 208
Query: 133 L 133
           L
Sbjct: 209 L 209

>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 60/113 (53%), Gaps = 8/113 (7%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV E ++ NL + IQ    +D   +   LY +L GI + H+  IIHRDL   N++    +
Sbjct: 144 LVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK-SD 200
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
            T+KI  D G+A+     F    T  V+ R YRAP+++ G       +D+W+V
Sbjct: 201 CTLKI-LDFGLARTAGTSF--MMTPYVVTRYYRAPEVILG-MGYKENVDIWSV 249

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 59/121 (48%), Gaps = 13/121 (10%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           ++ E +  +LH+ I      D H I+ F+Y  L  +   H   +IHRDL   NLL +  N
Sbjct: 91  IIQELMQTDLHRVISTQMLSDDH-IQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLIN-SN 148
Query: 78  KTVKIAADSGMAKEID-------APFDAHT--TEMVILR-YRAPKILFGRTNCFAAIDMW 127
             +K+  D G+A+ ID        P    +  TE V  R YRAP+++        A+D+W
Sbjct: 149 CDLKV-CDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVW 207
Query: 128 A 128
           +
Sbjct: 208 S 208

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 58/113 (51%), Gaps = 6/113 (5%)
Query: 18  LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           L+ EY  +  +++ +Q+    D      ++  + + +SYCH++++IHRD+   NLL    
Sbjct: 88  LILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA 147
Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            + +KIA        + AP    TT    L Y  P+++ GR +    +D+W++
Sbjct: 148 GE-LKIA---NFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHD-EKVDLWSL 195

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 60/113 (53%), Gaps = 8/113 (7%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV E ++ NL + IQ    +D   +   LY +L GI + H+  IIHRDL   N++    +
Sbjct: 144 LVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK-SD 200
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
            T+KI  D G+A+     F    T  V+ R YRAP+++ G       +D+W+V
Sbjct: 201 CTLKI-LDFGLARTAGTSF--MMTPYVVTRYYRAPEVILG-MGYKENVDIWSV 249

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 58/113 (51%), Gaps = 6/113 (5%)
Query: 18  LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           L+ EY  +  +++ +Q+    D      ++  + + +SYCH++++IHRD+   NLL    
Sbjct: 87  LILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA 146
Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            + +KIA        + AP    TT    L Y  P+++ GR +    +D+W++
Sbjct: 147 GE-LKIA---NFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHD-EKVDLWSL 194

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 60/113 (53%), Gaps = 6/113 (5%)
Query: 18  LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           L+ EY  +  +++ +Q+    D      ++  + + +SYCH++++IHRD+   NLL    
Sbjct: 86  LILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA 145
Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            + +KI AD G +    AP    TT    L Y  P+++ GR +    +D+W++
Sbjct: 146 GE-LKI-ADFGWS--CHAPSSRRTTLSGTLDYLPPEMIEGRMHD-EKVDLWSL 193

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 133 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 190
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+  D   D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 191 CELKI-LDFGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSV 238

>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 8/113 (7%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           +V E ++ NL + IQ    +D   +   LY +L GI + H+  IIHRDL   N++    +
Sbjct: 111 IVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK-SD 167
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
            T+KI  D G+A+     F    T  V+ R YRAP+++ G       +D+W+V
Sbjct: 168 CTLKI-LDFGLARTAGTSF--MMTPYVVTRYYRAPEVILG-MGYKENVDLWSV 216

>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 8/113 (7%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           +V E ++ NL + IQ    +D   +   LY +L GI + H+  IIHRDL   N++    +
Sbjct: 100 IVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK-SD 156
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
            T+KI  D G+A+     F    T  V+ R YRAP+++ G       +D+W+V
Sbjct: 157 CTLKI-LDFGLARTAGTSF--MMTPYVVTRYYRAPEVILG-MGYKENVDLWSV 205

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 59/121 (48%), Gaps = 13/121 (10%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           ++ E +  +LH+ I      D H I+ F+Y  L  +   H   +IHRDL   NLL +  N
Sbjct: 91  IIQELMQTDLHRVISTQMLSDDH-IQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLIN-SN 148
Query: 78  KTVKIAADSGMAKEID-------APFDAHT--TEMVILR-YRAPKILFGRTNCFAAIDMW 127
             +K+  D G+A+ ID        P    +  TE V  R YRAP+++        A+D+W
Sbjct: 149 CDLKV-CDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVW 207
Query: 128 A 128
           +
Sbjct: 208 S 208

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 8/113 (7%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           +V E ++ NL + IQ    +D   +   LY +L GI + H+  IIHRDL   N++    +
Sbjct: 107 IVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK-SD 163
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
            T+KI  D G+A+     F    T  V+ R YRAP+++ G       +D+W+V
Sbjct: 164 CTLKI-LDFGLARTAGTSF--MMTPYVVTRYYRAPEVILG-MGYKENVDIWSV 212

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 8/113 (7%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           +V E ++ NL + IQ    +D   +   LY +L GI + H+  IIHRDL   N++    +
Sbjct: 106 IVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK-SD 162
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
            T+KI  D G+A+     F    T  V+ R YRAP+++ G       +D+W+V
Sbjct: 163 CTLKI-LDFGLARTAGTSF--MMTPYVVTRYYRAPEVILG-MGYKENVDIWSV 211

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 9/113 (7%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV  ++  +L K +          I+  +Y +L G+ Y H+  ++HRDL   NL  + E+
Sbjct: 124 LVMPFMQTDLQKIMGME--FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVN-ED 180
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+      DA  T  V+ R YRAP+++    +    +D+W+V
Sbjct: 181 CELKI-LDFGLARHA----DAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSV 228

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 8/113 (7%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y +L G+ Y H+  IIHRDL   N+  + E+
Sbjct: 110 LVTTLMGADLNNIVKSQALSDEH-VQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVN-ED 167
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
             ++I  D G+A++     D   T  V  R YRAP+I+    +    +D+W+V
Sbjct: 168 SELRI-LDFGLARQA----DEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 215

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 8/113 (7%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           +V E ++ NL + IQ    +D   +   LY +L GI + H+  IIHRDL   N++    +
Sbjct: 106 IVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK-SD 162
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
            T+KI  D G+A+     F    T  V+ R YRAP+++ G       +D+W+V
Sbjct: 163 CTLKI-LDFGLARTAGTSF--MMTPYVVTRYYRAPEVILG-MGYKENVDIWSV 211

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 124 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 181
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+  D   D     +    YRAP+I+    +    +D+W+V
Sbjct: 182 CELKI-LDFGLARHTD---DEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSV 229

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 7/89 (7%)
Query: 42  IKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTT 101
           I+  +Y +L G+ Y H+  ++HRDL   NL  + E+  +KI  D G+A+      DA  T
Sbjct: 128 IQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVN-EDCELKI-LDFGLARHA----DAEMT 181
Query: 102 EMVILR-YRAPKILFGRTNCFAAIDMWAV 129
             V+ R YRAP+++    +    +D+W+V
Sbjct: 182 GYVVTRWYRAPEVILSWMHYNQTVDIWSV 210

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 58/118 (49%), Gaps = 6/118 (5%)
Query: 18  LVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           LV EY+    L ++I+ + P+       F   IL GI + H  +I+HRD+   N+L D  
Sbjct: 88  LVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILID-S 146
Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMV-ILRYRAPKILFGRT--NCFAAIDMWAVLY 131
           NKT+KI  D G+AK +       T  ++  ++Y +P+   G     C     +  VLY
Sbjct: 147 NKTLKI-FDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLY 203

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 60/113 (53%), Gaps = 6/113 (5%)
Query: 18  LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           L+ EY  +  +++ +Q+    D      ++  + + +SYCH++++IHRD+   NLL    
Sbjct: 85  LILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA 144
Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            + +KI AD G +  + AP    T     L Y  P+++ GR +    +D+W++
Sbjct: 145 GE-LKI-ADFGWS--VHAPSSRRTXLCGTLDYLPPEMIEGRMHD-EKVDLWSL 192

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 60/113 (53%), Gaps = 6/113 (5%)
Query: 18  LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           L+ EY  +  +++ +Q+    D      ++  + + +SYCH++++IHRD+   NLL    
Sbjct: 85  LILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA 144
Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            + +KI AD G +  + AP    T     L Y  P+++ GR +    +D+W++
Sbjct: 145 GE-LKI-ADFGWS--VHAPSSRRTELCGTLDYLPPEMIEGRMHD-EKVDLWSL 192

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 61/113 (53%), Gaps = 8/113 (7%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV E ++ NL + I  +  +D   +   LY +L GI + H+  IIHRDL   N++    +
Sbjct: 106 LVMELMDANLCQVI--HMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK-SD 162
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
            T+KI  D G+A+     F    T  V+ R YRAP+++ G     A +D+W+V
Sbjct: 163 CTLKI-LDFGLARTACTNF--MMTPYVVTRYYRAPEVILG-MGYAANVDIWSV 211

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 60/113 (53%), Gaps = 6/113 (5%)
Query: 18  LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           L+ EY  +  +++ +Q+    D      ++  + + +SYCH++++IHRD+   NLL    
Sbjct: 86  LILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA 145
Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            + +KI AD G +  + AP     T    L Y  P+++ GR +    +D+W++
Sbjct: 146 GE-LKI-ADFGWS--VHAPSSRRDTLCGTLDYLPPEMIEGRMHD-EKVDLWSL 193

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 60/113 (53%), Gaps = 6/113 (5%)
Query: 18  LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           L+ EY  +  +++ +Q+    D      ++  + + +SYCH++++IHRD+   NLL    
Sbjct: 86  LILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA 145
Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            + +KI AD G +  + AP    T     L Y  P+++ GR +    +D+W++
Sbjct: 146 GE-LKI-ADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEGRMHD-EKVDLWSL 193

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 60/113 (53%), Gaps = 6/113 (5%)
Query: 18  LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           L+ EY  +  +++ +Q+    D      ++  + + +SYCH++++IHRD+   NLL    
Sbjct: 85  LILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA 144
Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            + +KI AD G +  + AP    T     L Y  P+++ GR +    +D+W++
Sbjct: 145 GE-LKI-ADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEGRMHD-EKVDLWSL 192

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 60/113 (53%), Gaps = 6/113 (5%)
Query: 18  LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           L+ EY  +  +++ +Q+    D      ++  + + +SYCH++++IHRD+   NLL    
Sbjct: 85  LILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA 144
Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            + +KI AD G +  + AP    T     L Y  P+++ GR +    +D+W++
Sbjct: 145 GE-LKI-ADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEGRMHD-EKVDLWSL 192

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 60/113 (53%), Gaps = 6/113 (5%)
Query: 18  LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           L+ EY  +  +++ +Q+    D      ++  + + +SYCH++++IHRD+   NLL    
Sbjct: 90  LILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA 149
Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            + +KI AD G +  + AP    T     L Y  P+++ GR +    +D+W++
Sbjct: 150 GE-LKI-ADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEGRMHD-EKVDLWSL 197

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 161
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI    G+A+  D   D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 162 CELKILG-FGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 209

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 57/117 (48%), Gaps = 4/117 (3%)
Query: 18  LVFEYVNINLHKF-IQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
            V EYVN     F +Q+   +     + +   I   ++Y H R II+RDL   N+L D E
Sbjct: 130 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE 189
Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
              +K+  D GM KE   P D  +T      Y AP+IL G    F ++D WA+  L+
Sbjct: 190 GH-IKL-TDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGF-SVDWWALGVLM 243

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKE--IDAPFDAHTTEMVIL 106
           I+S + YCH ++I+HRDL   NLL D  +  +KI AD G + E  +    DA        
Sbjct: 123 IVSAVQYCHQKRIVHRDLKAENLLLDA-DMNIKI-ADFGFSNEFTVGGKLDAFCGAPP-- 178
Query: 107 RYRAPKILFGRTNCFAAIDMWAVLYLL 133
            Y AP++  G+      +D+W++  +L
Sbjct: 179 -YAAPELFQGKKYDGPEVDVWSLGVIL 204

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 66/139 (47%), Gaps = 28/139 (20%)
Query: 18  LVFEYVNINLHKFIQQ--YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           LVF+Y+  +LH  I+     P+    +   +Y ++  I Y H+  ++HRD+   N+L + 
Sbjct: 88  LVFDYMETDLHAVIRANILEPVHKQYV---VYQLIKVIKYLHSGGLLHRDMKPSNILLNA 144
Query: 76  ENKTVKIAADSGMAK-----------------EIDAPFDAHT---TEMVILR-YRAPKIL 114
           E   VK+A D G+++                 E    FD      T+ V  R YRAP+IL
Sbjct: 145 ECH-VKVA-DFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEIL 202
Query: 115 FGRTNCFAAIDMWAVLYLL 133
            G T     IDMW++  +L
Sbjct: 203 LGSTKYTKGIDMWSLGCIL 221

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 13/121 (10%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           ++ E +  +LH+ I      D H I+ F+Y  L  +   H   +IHRDL   NLL +  N
Sbjct: 91  IIQELMQTDLHRVISTQMLSDDH-IQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLIN-SN 148
Query: 78  KTVKIAADSGMAKEID--APFDAHTT-------EMVILR-YRAPKILFGRTNCFAAIDMW 127
             +K+  D G+A+ ID  A  ++  T       E V  R YRAP+++        A+D+W
Sbjct: 149 CDLKV-CDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVW 207
Query: 128 A 128
           +
Sbjct: 208 S 208

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 127 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 184
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+  D   D     +    YRAP+I+    +    +D+W+V
Sbjct: 185 CELKI-LDFGLARHTD---DEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSV 232

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 161
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+  D   D     +    YRAP+I+    +    +D+W+V
Sbjct: 162 CELKI-LDFGLARHTD---DEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSV 209

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 100 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 157
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+  D   D     +    YRAP+I+    +    +D+W+V
Sbjct: 158 CELKI-LDFGLARHTD---DEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSV 205

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 161
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+  D   D     +    YRAP+I+    +    +D+W+V
Sbjct: 162 CELKI-LDFGLARHTD---DEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSV 209

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Query: 18  LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           L+ EY  +  +++ +Q+    D      ++  + + +SYCH++K+IHRD+   NLL    
Sbjct: 85  LILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKKVIHRDIKPENLLLGSA 144
Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            + +KI AD G +  + AP          L Y  P+++ GR +    +D+W++
Sbjct: 145 GE-LKI-ADFGWS--VHAPSSRRAALCGTLDYLPPEMIEGRMHD-EKVDLWSL 192

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 4/114 (3%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           +VFE VN      +    P+     + +   ++ GI Y H +KIIHRD+   NLL   E+
Sbjct: 115 MVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVG-ED 173
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFA--AIDMWAV 129
             +KI AD G++ E        +  +    + AP+ L      F+  A+D+WA+
Sbjct: 174 GHIKI-ADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAM 226

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 8/113 (7%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV E ++ NL + I  +  +D   +   LY +L GI + H+  IIHRDL   N++    +
Sbjct: 104 LVMELMDANLCQVI--HMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK-SD 160
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
            T+KI  D G+A+     F    T  V+ R YRAP+++ G       +D+W+V
Sbjct: 161 CTLKI-LDFGLARTASTNF--MMTPYVVTRYYRAPEVILG-MGYKENVDIWSV 209

>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 59/113 (52%), Gaps = 8/113 (7%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           +V E ++ NL + IQ    +D   +   LY +L GI + H+  IIHRDL   N++    +
Sbjct: 108 IVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK-SD 164
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
            T+KI  D G+A+     F       V+ R YRAP+++ G       +D+W+V
Sbjct: 165 CTLKI-LDFGLARTAGTSF--MMVPFVVTRYYRAPEVILG-MGYKENVDIWSV 213

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 8/123 (6%)
Query: 15  RENLVF--EYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNL 71
           +ENL F  EY+N  +L   IQ  H  D      +   I+ G+ + H++ I++RDL   N+
Sbjct: 91  KENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNI 150
Query: 72  LADIENKTVKIAADSGMAKEIDAPFDAHTTEMV-ILRYRAPKILFGRTNCFAAIDMWAVL 130
           L D ++  +KI AD GM KE +   DA T E      Y AP+IL G+     ++D W+  
Sbjct: 151 LLD-KDGHIKI-ADFGMCKE-NMLGDAKTNEFCGTPDYIAPEILLGQKYN-HSVDWWSFG 206
Query: 131 YLL 133
            LL
Sbjct: 207 VLL 209

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 8/113 (7%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y +L G+ Y H+  IIHRDL   N+  + E+
Sbjct: 110 LVTTLMGADLNNIVKCQALSDEH-VQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVN-ED 167
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
             ++I  D G+A++     D   T  V  R YRAP+I+    +    +D+W+V
Sbjct: 168 SELRI-LDFGLARQA----DEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 215

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 111 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 168
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+      D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 169 CELKI-LDFGLARHT---ADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 216

>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 24/133 (18%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           +V E  + +L K  +    +    IK  LY +L G ++ H   IIHRDL   N L + ++
Sbjct: 107 IVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLN-QD 165
Query: 78  KTVKIAADSGMAKEIDAPFDAH----------------------TTEMVILRYRAPKILF 115
            +VK+  D G+A+ I++  D +                      T+ +V   YRAP+++ 
Sbjct: 166 CSVKV-CDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELIL 224
Query: 116 GRTNCFAAIDMWA 128
            + N   +ID+W+
Sbjct: 225 LQENYTKSIDIWS 237

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 111 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 168
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+      D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 169 CELKI-LDFGLARHT---ADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 216

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 9/121 (7%)
Query: 18  LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           +V EYV+   L  +I ++  ++    ++    ILS + YCH   ++HRDL   N+L D  
Sbjct: 88  MVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLD-A 146
Query: 77  NKTVKIAADSGMAKEI-DAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWA---VLYL 132
           +   KI AD G++  + D  F    T      Y AP+++ GR      +D+W+   +LY 
Sbjct: 147 HMNAKI-ADFGLSNMMSDGEF--LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYA 203
Query: 133 L 133
           L
Sbjct: 204 L 204

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 111 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 168
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+      D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 169 CELKI-LDFGLARHT---ADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 216

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 10/90 (11%)
Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKE--IDAPFDAHTTEMVIL 106
           I+S + YCH ++I+HRDL   NLL D  +  +KI AD G + E  +    D         
Sbjct: 120 IVSAVQYCHQKRIVHRDLKAENLLLDA-DMNIKI-ADFGFSNEFTVGGKLDTFCGSPP-- 175
Query: 107 RYRAPKILFGRTNCFAAIDMWA---VLYLL 133
            Y AP++  G+      +D+W+   +LY L
Sbjct: 176 -YAAPELFQGKKYDGPEVDVWSLGVILYTL 204

>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 27/137 (19%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           +V E  + +L K  +    +    +K  LY +L G  + H   IIHRDL   N L + ++
Sbjct: 109 IVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFIHESGIIHRDLKPANCLLN-QD 167
Query: 78  KTVKIAADSGMAKEIDAPFDAH-------------------------TTEMVILRYRAPK 112
            +VKI  D G+A+ I++  D H                         T+ +V   YRAP+
Sbjct: 168 CSVKI-CDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPE 226
Query: 113 ILFGRTNCFAAIDMWAV 129
           ++  + N   +ID+W+ 
Sbjct: 227 LILLQENYTNSIDIWST 243

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Query: 18  LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           L+ EY  +  +++ +Q+    D      ++  + + +SYCH++++IHRD+   NLL    
Sbjct: 88  LILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA 147
Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            + +KI AD G +  + AP          L Y  P+++ GR +    +D+W++
Sbjct: 148 GE-LKI-ADFGWS--VHAPSSRRAALCGTLDYLPPEMIEGRMHD-EKVDLWSL 195

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Query: 18  LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           L+ EY  +  +++ +Q+    D      ++  + + +SYCH++++IHRD+   NLL    
Sbjct: 85  LILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA 144
Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            + +KI AD G +  + AP          L Y  P+++ GR +    +D+W++
Sbjct: 145 GE-LKI-ADFGWS--VHAPSSRRAALCGTLDYLPPEMIEGRMHD-EKVDLWSL 192

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 58/113 (51%), Gaps = 6/113 (5%)
Query: 18  LVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           L+ EY     ++K +Q+    D      ++  + + +SYCH++++IHRD+   NLL    
Sbjct: 90  LILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA 149
Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            + +KI AD G +  + AP          L Y  P+++ GR +    +D+W++
Sbjct: 150 GE-LKI-ADFGWS--VHAPSSRRXXLXGTLDYLPPEMIEGRMHD-EKVDLWSL 197

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Query: 18  LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           L+ EY  +  +++ +Q+    D      ++  + + +SYCH++++IHRD+   NLL    
Sbjct: 87  LILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA 146
Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            + +KI AD G +  + AP          L Y  P+++ GR +    +D+W++
Sbjct: 147 GE-LKI-ADFGWS--VHAPSSRRXXLCGTLDYLPPEMIEGRMHD-EKVDLWSL 194

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Query: 18  LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           L+ EY  +  +++ +Q+    D      ++  + + +SYCH++++IHRD+   NLL    
Sbjct: 88  LILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA 147
Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            + +KI AD G +  + AP          L Y  P+++ GR +    +D+W++
Sbjct: 148 GE-LKI-ADFGWS--VHAPSSRRXXLCGTLDYLPPEMIEGRMHD-EKVDLWSL 195

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Query: 18  LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           L+ EY  +  +++ +Q+    D      ++  + + +SYCH++++IHRD+   NLL    
Sbjct: 85  LILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA 144
Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            + +KI AD G +  + AP          L Y  P+++ GR +    +D+W++
Sbjct: 145 GE-LKI-ADFGWS--VHAPSSRRXXLCGTLDYLPPEMIEGRMHD-EKVDLWSL 192

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 60/116 (51%), Gaps = 6/116 (5%)
Query: 18  LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           L+ EY  +  +++ +Q+    D      ++  + + +SYCH++++IHRD+   NLL    
Sbjct: 111 LILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA 170
Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYL 132
            + +KI AD G +  + AP          L Y  P+++ GR +    +D+W++  L
Sbjct: 171 GE-LKI-ADFGWS--VHAPSSRRDDLCGTLDYLPPEMIEGRMHD-EKVDLWSLGVL 221

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 63/123 (51%), Gaps = 13/123 (10%)
Query: 18  LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           +V EYV+   L  +I ++  ++    ++    ILS + YCH   ++HRDL   N+L D  
Sbjct: 88  MVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLD-A 146
Query: 77  NKTVKIAADSGMAKEI-DAPF--DAHTTEMVILRYRAPKILFGRTNCFAAIDMWA---VL 130
           +   KI AD G++  + D  F  D+  +      Y AP+++ GR      +D+W+   +L
Sbjct: 147 HMNAKI-ADFGLSNMMSDGEFLRDSCGSP----NYAAPEVISGRLYAGPEVDIWSCGVIL 201
Query: 131 YLL 133
           Y L
Sbjct: 202 YAL 204

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Query: 18  LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           L+ EY  +  +++ +Q+    D      ++  + + +SYCH++++IHRD+   NLL    
Sbjct: 88  LILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA 147
Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            + +KI AD G +  + AP          L Y  P+++ GR +    +D+W++
Sbjct: 148 GE-LKI-ADFGWS--VHAPSSRRDDLCGTLDYLPPEMIEGRMHD-EKVDLWSL 195

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 56/117 (47%), Gaps = 4/117 (3%)
Query: 18  LVFEYVNINLHKF-IQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
            V EYVN     F +Q+   +     + +   I   ++Y H R II+RDL   N+L D E
Sbjct: 98  FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE 157
Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
              +K+  D GM KE   P D  +       Y AP+IL G    F ++D WA+  L+
Sbjct: 158 GH-IKL-TDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGF-SVDWWALGVLM 211

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 161
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D  +A+  D   D  T  +    YRAP+I+    +    +D+W+V
Sbjct: 162 CELKI-LDFYLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 209

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 8/113 (7%)
Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y +L G+ Y H+  IIHRDL   N+  + E+
Sbjct: 102 LVTTLMGADLNNIVKCQALSDEH-VQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVN-ED 159
Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
             ++I  D G+A++     D   T  V  R YRAP+I+    +    +D+W+V
Sbjct: 160 CELRI-LDFGLARQA----DEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 207

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 56/117 (47%), Gaps = 4/117 (3%)
Query: 18  LVFEYVNINLHKF-IQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
            V EYVN     F +Q+   +     + +   I   ++Y H R II+RDL   N+L D E
Sbjct: 83  FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE 142
Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
              +K+  D GM KE   P D  +       Y AP+IL G    F ++D WA+  L+
Sbjct: 143 GH-IKL-TDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGF-SVDWWALGVLM 196

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 56/117 (47%), Gaps = 4/117 (3%)
Query: 18  LVFEYVNINLHKF-IQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
            V EYVN     F +Q+   +     + +   I   ++Y H R II+RDL   N+L D E
Sbjct: 87  FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE 146
Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
              +K+  D GM KE   P D  +       Y AP+IL G    F ++D WA+  L+
Sbjct: 147 GH-IKL-TDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGF-SVDWWALGVLM 200

>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs Resolution) Length = 362

Iteration: 1
 Score = 45.8 bits (107), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 42  IKKFLYCILSGISYCHARKIIHRDLTTMN-LLADIENKTVKIAADSGMAKEIDAPFDAHT 100
           I+ F+Y IL G+   H   ++HRDL   N LLAD  + T+    D  +A+E  A  DA+ 
Sbjct: 136 IQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITI---CDFNLAREDTA--DANK 190
Query: 101 TEMVILR-YRAPKILFGRTNCFAAIDMWA 128
           T  V  R YRAP+++         +DMW+
Sbjct: 191 THYVTHRWYRAPELVMQFKGFTKLVDMWS 219

>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With Sb203580 Length = 362

Iteration: 1
 Score = 45.8 bits (107), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 42  IKKFLYCILSGISYCHARKIIHRDLTTMN-LLADIENKTVKIAADSGMAKEIDAPFDAHT 100
           I+ F+Y IL G+   H   ++HRDL   N LLAD  + T+    D  +A+E  A  DA+ 
Sbjct: 136 IQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITI---CDFNLAREDTA--DANK 190
Query: 101 TEMVILR-YRAPKILFGRTNCFAAIDMWA 128
           T  V  R YRAP+++         +DMW+
Sbjct: 191 THYVTHRWYRAPELVMQFKGFTKLVDMWS 219

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 11/100 (11%)
Query: 39  SHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIA-ADSGMAKEIDAPFD 97
           SH I++    IL  +++CH   I+HRDL   NLL   ++K   +  AD G+A E+     
Sbjct: 106 SHCIQQ----ILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQ 161
Query: 98  AHTTEMVILRYRAPKILFGRTNCFA-AIDMWA---VLYLL 133
           A         Y +P++L  R + +   +DMWA   +LY+L
Sbjct: 162 AWFGFAGTPGYLSPEVL--RKDPYGKPVDMWACGVILYIL 199

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKI-AADSGMAKEIDAPFDAHTTEMVILR 107
           +LSGI+Y H  KI+HRDL   NLL + ++K   I   D G++   +A       ++    
Sbjct: 158 VLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKMKDKIGTAY 216
Query: 108 YRAPKILFGRTNCFAAIDMWA---VLYLL 133
           Y AP++L G  +     D+W+   +LY+L
Sbjct: 217 YIAPEVLHGTYD--EKCDVWSTGVILYIL 243

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKI-AADSGMAKEIDAPFDAHTTEMVILR 107
           +LSGI+Y H  KI+HRDL   NLL + ++K   I   D G++   +A       ++    
Sbjct: 159 VLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKMKDKIGTAY 217
Query: 108 YRAPKILFGRTNCFAAIDMWA---VLYLL 133
           Y AP++L G  +     D+W+   +LY+L
Sbjct: 218 YIAPEVLHGTYD--EKCDVWSTGVILYIL 244

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKI-AADSGMAKEIDAPFDAHTTEMVILR 107
           +LSGI+Y H  KI+HRDL   NLL + ++K   I   D G++   +A       ++    
Sbjct: 135 VLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKXKDKIGTAY 193
Query: 108 YRAPKILFGRTNCFAAIDMWA---VLYLL 133
           Y AP++L G  +     D+W+   +LY+L
Sbjct: 194 YIAPEVLHGTYD--EKCDVWSTGVILYIL 220

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 11/100 (11%)
Query: 39  SHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIA-ADSGMAKEIDAPFD 97
           SH I++    IL  +++CH   I+HRDL   NLL   ++K   +  AD G+A E+     
Sbjct: 106 SHCIQQ----ILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQ 161
Query: 98  AHTTEMVILRYRAPKILFGRTNCFA-AIDMWA---VLYLL 133
           A         Y +P++L  R + +   +DMWA   +LY+L
Sbjct: 162 AWFGFAGTPGYLSPEVL--RKDPYGKPVDMWACGVILYIL 199

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 6/115 (5%)
Query: 14  KRENLVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLL 72
           KR  L+ E+     L+K +Q++   D      F+  +   + YCH RK+IHRD+   NLL
Sbjct: 87  KRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLL 146
Query: 73  ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMW 127
              + + +KI AD G +  + AP          L Y  P+++ G+T+    +D+W
Sbjct: 147 MGYKGE-LKI-ADFGWS--VHAPSLRRRXMCGTLDYLPPEMIEGKTHD-EKVDLW 196

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 6/115 (5%)
Query: 14  KRENLVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLL 72
           KR  L+ E+     L+K +Q++   D      F+  +   + YCH RK+IHRD+   NLL
Sbjct: 88  KRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLL 147
Query: 73  ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMW 127
              + + +KI AD G +  + AP          L Y  P+++ G+T+    +D+W
Sbjct: 148 MGYKGE-LKI-ADFGWS--VHAPSLRRRXMCGTLDYLPPEMIEGKTHD-EKVDLW 197

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 8/123 (6%)
Query: 15  RENLVF--EYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNL 71
           +ENL F  EY+N  +L   IQ  H  D      +   I+ G+ + H++ I++RDL   N+
Sbjct: 90  KENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNI 149
Query: 72  LADIENKTVKIAADSGMAKEIDAPFDAHTTEMV-ILRYRAPKILFGRTNCFAAIDMWAVL 130
           L D ++  +KI AD GM KE +   DA T        Y AP+IL G+     ++D W+  
Sbjct: 150 LLD-KDGHIKI-ADFGMCKE-NMLGDAKTNXFCGTPDYIAPEILLGQKYN-HSVDWWSFG 205
Query: 131 YLL 133
            LL
Sbjct: 206 VLL 208

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 16/95 (16%)
Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEI--------------DA 94
           IL  +SY H++ IIHRDL  MN+  D E++ VKI  D G+AK +                
Sbjct: 125 ILEALSYIHSQGIIHRDLKPMNIFID-ESRNVKI-GDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 95  PFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             D  T+ +    Y A ++L G  +    IDM+++
Sbjct: 183 SSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSL 217

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKI-AADSGMAKEIDAPFDAHTTEMVILR 107
           +LSGI+Y H  KI+HRDL   NLL + ++K   I   D G++   +A       ++    
Sbjct: 135 VLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKMKDKIGTAY 193
Query: 108 YRAPKILFGRTNCFAAIDMWA---VLYLL 133
           Y AP++L G  +     D+W+   +LY+L
Sbjct: 194 YIAPEVLHGTYD--EKCDVWSTGVILYIL 220

>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 16/95 (16%)
Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEI--------------DA 94
           IL  +SY H++ IIHRDL  MN+  D E++ VKI  D G+AK +                
Sbjct: 125 ILEALSYIHSQGIIHRDLKPMNIFID-ESRNVKI-GDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 95  PFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             D  T+ +    Y A ++L G  +    IDM+++
Sbjct: 183 SSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSL 217

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 10/90 (11%)
Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKE--IDAPFDAHTTEMVIL 106
           I+S + YCH + I+HRDL   NLL D  +  +KI AD G + E       DA        
Sbjct: 122 IVSAVQYCHQKFIVHRDLKAENLLLDA-DXNIKI-ADFGFSNEFTFGNKLDAFCGAPP-- 177
Query: 107 RYRAPKILFGRTNCFAAIDMWA---VLYLL 133
            Y AP++  G+      +D+W+   +LY L
Sbjct: 178 -YAAPELFQGKKYDGPEVDVWSLGVILYTL 206

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMV-ILR 107
           I+S + YCH + I+HRDL   NLL D  +  +KI AD G + E    F     E      
Sbjct: 122 IVSAVQYCHQKFIVHRDLKAENLLLDA-DMNIKI-ADFGFSNEFT--FGNKLDEFCGSPP 177
Query: 108 YRAPKILFGRTNCFAAIDMWA---VLYLL 133
           Y AP++  G+      +D+W+   +LY L
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTL 206

>pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 47  YCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAP--FDAHTTEMV 104
           Y +  G+ Y  ++K IHRDLT  N+L   EN  +KI AD G+A++I+    +   T   +
Sbjct: 151 YQLARGMEYLASQKCIHRDLTARNVLV-TENNVMKI-ADFGLARDINNIDYYKKTTNGRL 208
Query: 105 ILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
            +++ AP+ LF R     + D+W+   L+
Sbjct: 209 PVKWMAPEALFDRVYTHQS-DVWSFGVLM 236

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKIA-ADSGMAKEIDAPFDAHTTEMVILR 107
           +LSGI+Y H  KI+HRDL   NLL + ++K   I   D G++   +A       ++    
Sbjct: 141 VLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKMKDKIGTAY 199
Query: 108 YRAPKILFGRTNCFAAIDMWA---VLYLL 133
           Y AP++L G  +     D+W+   +LY+L
Sbjct: 200 YIAPEVLHGTYD--EKCDVWSTGVILYIL 226

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 10/90 (11%)
Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKE--IDAPFDAHTTEMVIL 106
           I+S + YCH + I+HRDL   NLL D  +  +KI AD G + E       DA        
Sbjct: 122 IVSAVQYCHQKFIVHRDLKAENLLLDA-DMNIKI-ADFGFSNEFTFGNKLDAFCGAPP-- 177
Query: 107 RYRAPKILFGRTNCFAAIDMWA---VLYLL 133
            Y AP++  G+      +D+W+   +LY L
Sbjct: 178 -YAAPELFQGKKYDGPEVDVWSLGVILYTL 206

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 10/90 (11%)
Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKE--IDAPFDAHTTEMVIL 106
           I+S + YCH + I+HRDL   NLL D  +  +KI AD G + E  +    D         
Sbjct: 123 IVSAVQYCHQKYIVHRDLKAENLLLD-GDMNIKI-ADFGFSNEFTVGNKLDTFCGSPP-- 178
Query: 107 RYRAPKILFGRTNCFAAIDMWA---VLYLL 133
            Y AP++  G+      +D+W+   +LY L
Sbjct: 179 -YAAPELFQGKKYDGPEVDVWSLGVILYTL 207

>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex With An Indirubin Ligand Length = 429

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 16/119 (13%)
Query: 18  LVFEYVNINLHKFIQQ--YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           + FE +++NL++ I++  +      L++KF + IL  +   H  +IIH DL   N+L   
Sbjct: 176 MTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENIL--- 232
Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILR-----YRAPKILFGRTNCFAAIDMWAV 129
               +K    SG+ K ID     +  + V        YRAP+++ G       IDMW++
Sbjct: 233 ----LKQQGRSGI-KVIDFGSSCYEHQRVYTXIQSRFYRAPEVILG-ARYGMPIDMWSL 285

>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) Length = 429

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 16/119 (13%)
Query: 18  LVFEYVNINLHKFIQQ--YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           + FE +++NL++ I++  +      L++KF + IL  +   H  +IIH DL   N+L   
Sbjct: 176 MTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENIL--- 232
Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILR-----YRAPKILFGRTNCFAAIDMWAV 129
               +K    SG+ K ID     +  + V        YRAP+++ G       IDMW++
Sbjct: 233 ----LKQQGRSGI-KVIDFGSSCYEHQRVYXXIQSRFYRAPEVILG-ARYGMPIDMWSL 285

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 13/101 (12%)
Query: 39  SHLIKKFLYCILSGISYCHARKIIHRDLTTMNLL--ADIENKTVKIAADSGMAKEIDAPF 96
           SH I++ L  +L    +CH   ++HRDL   NLL  + ++   VK+ AD G+A E++   
Sbjct: 124 SHCIQQILEAVL----HCHQMGVVHRDLKPENLLLASKLKGAAVKL-ADFGLAIEVEGEQ 178
Query: 97  DAHTTEMVILRYRAPKILFGRTNCFA-AIDMWA---VLYLL 133
            A         Y +P++L  R + +   +D+WA   +LY+L
Sbjct: 179 QAWFGFAGTPGYLSPEVL--RKDPYGKPVDLWACGVILYIL 217

>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41 Length = 417

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 16/119 (13%)
Query: 18  LVFEYVNINLHKFIQQ--YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           + FE +++NL++ I++  +      L++KF + IL  +   H  +IIH DL   N+L   
Sbjct: 176 MTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENIL--- 232
Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILR-----YRAPKILFGRTNCFAAIDMWAV 129
               +K    SG+ K ID     +  + V        YRAP+++ G       IDMW++
Sbjct: 233 ----LKQQGRSGI-KVIDFGSSCYEHQRVYTXIQSRFYRAPEVILG-ARYGMPIDMWSL 285

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 5/108 (4%)
Query: 24  NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIA 83
           N  L K+I++    D    + +   I+S + Y H + IIHRDL   N+L + E+  ++I 
Sbjct: 113 NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQI- 170
Query: 84  ADSGMAKEIDAPFDAHTTEMVI--LRYRAPKILFGRTNCFAAIDMWAV 129
            D G AK +            +   +Y +P++L  ++ C ++ D+WA+
Sbjct: 171 TDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS-DLWAL 217

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 5/108 (4%)
Query: 24  NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIA 83
           N  L K+I++    D    + +   I+S + Y H + IIHRDL   N+L + E+  ++I 
Sbjct: 113 NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQI- 170
Query: 84  ADSGMAKEIDAPF-DAHTTEMV-ILRYRAPKILFGRTNCFAAIDMWAV 129
            D G AK +      A     V   +Y +P++L  ++ C ++ D+WA+
Sbjct: 171 TDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSS-DLWAL 217

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRY 108
           I+S + YCH + I+HRDL   NLL D  +  +KI AD G + E     +   T      Y
Sbjct: 115 IVSAVQYCHQKFIVHRDLKAENLLLDA-DMNIKI-ADFGFSNEFTFG-NKLDTFCGSPPY 171
Query: 109 RAPKILFGRTNCFAAIDMWA---VLYLL 133
            AP++  G+      +D+W+   +LY L
Sbjct: 172 AAPELFQGKKYDGPEVDVWSLGVILYTL 199

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 5/108 (4%)
Query: 24  NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIA 83
           N  L K+I++    D    + +   I+S + Y H + IIHRDL   N+L + E+  ++I 
Sbjct: 98  NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQI- 155
Query: 84  ADSGMAKEIDAPFDAHTTEMVI--LRYRAPKILFGRTNCFAAIDMWAV 129
            D G AK +            +   +Y +P++L  ++ C ++ D+WA+
Sbjct: 156 TDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS-DLWAL 202

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 5/108 (4%)
Query: 24  NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIA 83
           N  L K+I++    D    + +   I+S + Y H + IIHRDL   N+L + E+  ++I 
Sbjct: 91  NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQI- 148
Query: 84  ADSGMAKEIDAPFDAHTTEMVI--LRYRAPKILFGRTNCFAAIDMWAV 129
            D G AK +            +   +Y +P++L  ++ C ++ D+WA+
Sbjct: 149 TDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS-DLWAL 195

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 5/108 (4%)
Query: 24  NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIA 83
           N  L K+I++    D    + +   I+S + Y H + IIHRDL   N+L + E+  ++I 
Sbjct: 92  NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQI- 149
Query: 84  ADSGMAKEIDAPFDAHTTEMVI--LRYRAPKILFGRTNCFAAIDMWAV 129
            D G AK +            +   +Y +P++L  ++ C ++ D+WA+
Sbjct: 150 TDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS-DLWAL 196

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRY 108
           I+S + YCH + I+HRDL   NLL D  +  +KI AD G + E     +   T      Y
Sbjct: 122 IVSAVQYCHQKFIVHRDLKAENLLLDA-DMNIKI-ADFGFSNEFTFG-NKLDTFCGSPPY 178
Query: 109 RAPKILFGRTNCFAAIDMWA---VLYLL 133
            AP++  G+      +D+W+   +LY L
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTL 206

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 5/108 (4%)
Query: 24  NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIA 83
           N  L K+I++    D    + +   I+S + Y H + IIHRDL   N+L + E+  ++I 
Sbjct: 116 NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQI- 173
Query: 84  ADSGMAKEIDAPFDAHTTEMVI--LRYRAPKILFGRTNCFAAIDMWAV 129
            D G AK +            +   +Y +P++L  ++ C ++ D+WA+
Sbjct: 174 TDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS-DLWAL 220

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 5/108 (4%)
Query: 24  NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIA 83
           N  L K+I++    D    + +   I+S + Y H + IIHRDL   N+L + E+  ++I 
Sbjct: 114 NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQI- 171
Query: 84  ADSGMAKEIDAPFDAHTTEMVI--LRYRAPKILFGRTNCFAAIDMWAV 129
            D G AK +            +   +Y +P++L  ++ C ++ D+WA+
Sbjct: 172 TDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS-DLWAL 218

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 5   MKSMSLWVHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHR 64
           +K   LW+      + EY+       + +  P+D   I   L  IL G+ Y H+ K IHR
Sbjct: 95  LKDTKLWI------IMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHR 148
Query: 65  DLTTMNLLADIENKTVKIAADSGMAKEI 92
           D+   N+L   E+  VK+ AD G+A ++
Sbjct: 149 DIKAANVLLS-EHGEVKL-ADFGVAGQL 174

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 5/108 (4%)
Query: 24  NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIA 83
           N  L K+I++    D    + +   I+S + Y H + IIHRDL   N+L + E+  ++I 
Sbjct: 114 NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQI- 171
Query: 84  ADSGMAKEIDAPFDAHTTEMVI--LRYRAPKILFGRTNCFAAIDMWAV 129
            D G AK +            +   +Y +P++L  ++ C ++ D+WA+
Sbjct: 172 TDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS-DLWAL 218

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 5/108 (4%)
Query: 24  NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIA 83
           N  L K+I++    D    + +   I+S + Y H + IIHRDL   N+L + E+  ++I 
Sbjct: 116 NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQI- 173
Query: 84  ADSGMAKEIDAPFDAHTTEMVI--LRYRAPKILFGRTNCFAAIDMWAV 129
            D G AK +            +   +Y +P++L  ++ C ++ D+WA+
Sbjct: 174 TDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS-DLWAL 220

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRY 108
           I+S + YCH + I+HRDL   NLL D  +  +KI AD G + E     +   T      Y
Sbjct: 122 IVSAVQYCHQKFIVHRDLKAENLLLDA-DMNIKI-ADFGFSNEFTFG-NKLDTFCGSPPY 178
Query: 109 RAPKILFGRTNCFAAIDMWA---VLYLL 133
            AP++  G+      +D+W+   +LY L
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTL 206

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 5/108 (4%)
Query: 24  NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIA 83
           N  L K+I++    D    + +   I+S + Y H + IIHRDL   N+L + E+  ++I 
Sbjct: 93  NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQI- 150
Query: 84  ADSGMAKEIDAPFDAHTTEMVI--LRYRAPKILFGRTNCFAAIDMWAV 129
            D G AK +            +   +Y +P++L  ++ C ++ D+WA+
Sbjct: 151 TDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS-DLWAL 197

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 5   MKSMSLWVHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHR 64
           +K   LW+      + EY+       + +  P+D   I   L  IL G+ Y H+ K IHR
Sbjct: 75  LKDTKLWI------IMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHR 128
Query: 65  DLTTMNLLADIENKTVKIAADSGMAKEI 92
           D+   N+L   E+  VK+ AD G+A ++
Sbjct: 129 DIKAANVLLS-EHGEVKL-ADFGVAGQL 154

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 5/108 (4%)
Query: 24  NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIA 83
           N  L K+I++    D    + +   I+S + Y H + IIHRDL   N+L + E+  ++I 
Sbjct: 114 NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQI- 171
Query: 84  ADSGMAKEIDAPFDAHTTEMVI--LRYRAPKILFGRTNCFAAIDMWAV 129
            D G AK +            +   +Y +P++L  ++ C ++ D+WA+
Sbjct: 172 TDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSS-DLWAL 218

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 5   MKSMSLWVHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHR 64
           +K   LW+      + EY+       + +  P+D   I   L  IL G+ Y H+ K IHR
Sbjct: 75  LKDTKLWI------IMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHR 128
Query: 65  DLTTMNLLADIENKTVKIAADSGMAKEI 92
           D+   N+L   E+  VK+ AD G+A ++
Sbjct: 129 DIKAANVLLS-EHGEVKL-ADFGVAGQL 154

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 5   MKSMSLWVHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHR 64
           +K   LW+      + EY+       + +  P+D   I   L  IL G+ Y H+ K IHR
Sbjct: 90  LKDTKLWI------IMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHR 143
Query: 65  DLTTMNLLADIENKTVKIAADSGMAKEI 92
           D+   N+L   E+  VK+ AD G+A ++
Sbjct: 144 DIKAANVLLS-EHGEVKL-ADFGVAGQL 169

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRY 108
           I+S + YCH + I+HRDL   NLL D  +  +KI AD G + E     +   T      Y
Sbjct: 122 IVSAVQYCHQKFIVHRDLKAENLLLDA-DMNIKI-ADFGFSNEFTFG-NKLDTFCGSPPY 178
Query: 109 RAPKILFGRTNCFAAIDMWA---VLYLL 133
            AP++  G+      +D+W+   +LY L
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTL 206

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 5/108 (4%)
Query: 24  NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIA 83
           N  L K+I++    D    + +   I+S + Y H + IIHRDL   N+L + E+  ++I 
Sbjct: 94  NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQI- 151
Query: 84  ADSGMAKEIDAPFDAHTTEMVI--LRYRAPKILFGRTNCFAAIDMWAV 129
            D G AK +            +   +Y +P++L  ++ C ++ D+WA+
Sbjct: 152 TDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS-DLWAL 198

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 5/108 (4%)
Query: 24  NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIA 83
           N  L K+I++    D    + +   I+S + Y H + IIHRDL   N+L + E+  ++I 
Sbjct: 114 NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQI- 171
Query: 84  ADSGMAKEIDAPFDAHTTEMVI--LRYRAPKILFGRTNCFAAIDMWAV 129
            D G AK +            +   +Y +P++L  ++ C ++ D+WA+
Sbjct: 172 TDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS-DLWAL 218

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 5/108 (4%)
Query: 24  NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIA 83
           N  L K+I++    D    + +   I+S + Y H + IIHRDL   N+L + E+  ++I 
Sbjct: 116 NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQI- 173
Query: 84  ADSGMAKEIDAPFDAHTTEMVI--LRYRAPKILFGRTNCFAAIDMWAV 129
            D G AK +            +   +Y +P++L  ++ C ++ D+WA+
Sbjct: 174 TDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS-DLWAL 220

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 5/108 (4%)
Query: 24  NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIA 83
           N  L K+I++    D    + +   I+S + Y H + IIHRDL   N+L + E+  ++I 
Sbjct: 117 NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQI- 174
Query: 84  ADSGMAKEIDAPF-DAHTTEMV-ILRYRAPKILFGRTNCFAAIDMWAV 129
            D G AK +      A     V   +Y +P++L  ++ C ++ D+WA+
Sbjct: 175 TDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSS-DLWAL 221

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 5/108 (4%)
Query: 24  NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIA 83
           N  L K+I++    D    + +   I+S + Y H + IIHRDL   N+L + E+  ++I 
Sbjct: 117 NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQI- 174
Query: 84  ADSGMAKEIDAPFDAHTTEMVI--LRYRAPKILFGRTNCFAAIDMWAV 129
            D G AK +            +   +Y +P++L  ++ C ++ D+WA+
Sbjct: 175 TDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS-DLWAL 221

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 5/108 (4%)
Query: 24  NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIA 83
           N  L K+I++    D    + +   I+S + Y H + IIHRDL   N+L + E+  ++I 
Sbjct: 116 NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQI- 173
Query: 84  ADSGMAKEIDAPFDAHTTEMVI--LRYRAPKILFGRTNCFAAIDMWAV 129
            D G AK +            +   +Y +P++L  ++ C ++ D+WA+
Sbjct: 174 TDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS-DLWAL 220

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 5/108 (4%)
Query: 24  NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIA 83
           N  L K+I++    D    + +   I+S + Y H + IIHRDL   N+L + E+  ++I 
Sbjct: 121 NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQI- 178
Query: 84  ADSGMAKEIDAPFDAHTTEMVI--LRYRAPKILFGRTNCFAAIDMWAV 129
            D G AK +            +   +Y +P++L  ++ C ++ D+WA+
Sbjct: 179 TDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS-DLWAL 225

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 5/108 (4%)
Query: 24  NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIA 83
           N  L K+I++    D    + +   I+S + Y H + IIHRDL   N+L + E+  ++I 
Sbjct: 119 NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQI- 176
Query: 84  ADSGMAKEIDAPFDAHTTEMVI--LRYRAPKILFGRTNCFAAIDMWAV 129
            D G AK +            +   +Y +P++L  ++ C ++ D+WA+
Sbjct: 177 TDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS-DLWAL 223

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 6/92 (6%)
Query: 45  FLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMV 104
           F+   + G+ Y H  ++IHRDL   NL  + ++  VKI  D G+A +I+   +   T   
Sbjct: 147 FMRQTIQGVQYLHNNRVIHRDLKLGNLFLN-DDMDVKI-GDFGLATKIEFDGERKKTLCG 204
Query: 105 ILRYRAPKILFGRTNCFAAIDMWA---VLYLL 133
              Y AP++L  + + F  +D+W+   +LY L
Sbjct: 205 TPNYIAPEVLCKKGHSF-EVDIWSLGCILYTL 235

>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 47  YCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAP--FDAHTTEMV 104
           Y +  G+ Y  ++K IHRDL   N+L   EN  +KI AD G+A++I+    +   T   +
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKI-ADFGLARDINNIDYYKKTTNGRL 221
Query: 105 ILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
            +++ AP+ LF R     + D+W+   L+
Sbjct: 222 PVKWMAPEALFDRVYTHQS-DVWSFGVLM 249

>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 47  YCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAP--FDAHTTEMV 104
           Y +  G+ Y  ++K IHRDL   N+L   EN  +KI AD G+A++I+    +   T   +
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKI-ADFGLARDINNIDYYKKTTNGRL 221
Query: 105 ILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
            +++ AP+ LF R     + D+W+   L+
Sbjct: 222 PVKWMAPEALFDRVYTHQS-DVWSFGVLM 249

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 45  FLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMV 104
           +L  I+ G  Y H  ++IHRDL   NL  + E+  VKI  D G+A +++   +   T   
Sbjct: 122 YLRQIVLGCQYLHRNRVIHRDLKLGNLFLN-EDLEVKI-GDFGLATKVEYDGERKKTLCG 179
Query: 105 ILRYRAPKILFGRTNCFAAIDMWAV 129
              Y AP++L  + + F  +D+W++
Sbjct: 180 TPNYIAPEVLSKKGHSF-EVDVWSI 203

>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 42.4 bits (98), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 47  YCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAP--FDAHTTEMV 104
           Y +  G+ Y  ++K IHRDL   N+L   EN  +KI AD G+A++I+    +   T   +
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKI-ADFGLARDINNIDYYKKTTNGRL 221
Query: 105 ILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
            +++ AP+ LF R     + D+W+   L+
Sbjct: 222 PVKWMAPEALFDRVYTHQS-DVWSFGVLM 249

>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 42.4 bits (98), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 47  YCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAP--FDAHTTEMV 104
           Y +  G+ Y  ++K IHRDL   N+L   EN  +KI AD G+A++I+    +   T   +
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKI-ADFGLARDINNIDYYKKTTNGRL 221
Query: 105 ILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
            +++ AP+ LF R     + D+W+   L+
Sbjct: 222 PVKWMAPEALFDRVYTHQS-DVWSFGVLM 249

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 42.4 bits (98), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 45  FLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMV 104
           +L  I+ G  Y H  ++IHRDL   NL  + E+  VKI  D G+A +++   +   T   
Sbjct: 122 YLRQIVLGCQYLHRNRVIHRDLKLGNLFLN-EDLEVKI-GDFGLATKVEYDGERKKTLCG 179
Query: 105 ILRYRAPKILFGRTNCFAAIDMWAV 129
              Y AP++L  + + F  +D+W++
Sbjct: 180 TPNYIAPEVLSKKGHSF-EVDVWSI 203

>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 42.4 bits (98), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 47  YCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAP--FDAHTTEMV 104
           Y +  G+ Y  ++K IHRDL   N+L   EN  +KI AD G+A++I+    +   T   +
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKI-ADFGLARDINNIDYYKKTTNGRL 221
Query: 105 ILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
            +++ AP+ LF R     + D+W+   L+
Sbjct: 222 PVKWMAPEALFDRVYTHQS-DVWSFGVLM 249

>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 46  LYCILSGISYCHARKIIHRDLTTMNLLADIEN---KTVKIAADSGMAKEIDAPFDAHTTE 102
           L+ I   + Y HA+ ++HRDL   N+L   E+   ++++I  D G AK++ A      T 
Sbjct: 122 LFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRI-CDFGFAKQLRAENGLLXTP 180
Query: 103 MVILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
                + AP++L  R    AA D+W++  LL
Sbjct: 181 CYTANFVAPEVLE-RQGYDAACDIWSLGVLL 210

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 45  FLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMV 104
           +L  I+ G  Y H  ++IHRDL   NL  + E+  VKI  D G+A +++   +   T   
Sbjct: 126 YLRQIVLGCQYLHRNRVIHRDLKLGNLFLN-EDLEVKI-GDFGLATKVEYDGERKKTLCG 183
Query: 105 ILRYRAPKILFGRTNCFAAIDMWAV 129
              Y AP++L  + + F  +D+W++
Sbjct: 184 TPNYIAPEVLSKKGHSF-EVDVWSI 207

>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 47  YCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAP--FDAHTTEMV 104
           Y +  G+ Y  ++K IHRDL   N+L   EN  +KI AD G+A++I+    +   T   +
Sbjct: 156 YQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKI-ADFGLARDINNIDYYKKTTNGRL 213
Query: 105 ILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
            +++ AP+ LF R     + D+W+   L+
Sbjct: 214 PVKWMAPEALFDRVYTHQS-DVWSFGVLM 241

>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 47  YCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAP--FDAHTTEMV 104
           Y +  G+ Y  ++K IHRDL   N+L   EN  +KI AD G+A++I+    +   T   +
Sbjct: 153 YQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKI-ADFGLARDINNIDYYKKTTNGRL 210
Query: 105 ILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
            +++ AP+ LF R     + D+W+   L+
Sbjct: 211 PVKWMAPEALFDRVYTHQS-DVWSFGVLM 238

>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 8/125 (6%)
Query: 11  WVHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMN 70
           ++  RE    EY     H   +Q   + S  +    Y +  G+ Y  ++K IHRDL   N
Sbjct: 124 YLQAREPPGLEYSYNPSHNPEEQ---LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARN 180
Query: 71  LLADIENKTVKIAADSGMAKEID--APFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWA 128
           +L   E+  +KI AD G+A++I     +   T   + +++ AP+ LF R     + D+W+
Sbjct: 181 VLV-TEDNVMKI-ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS-DVWS 237
Query: 129 VLYLL 133
              LL
Sbjct: 238 FGVLL 242

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRY 108
           IL G+ Y H  +I+HRD+   N+L +  +  +KI +D G +K +        T    L+Y
Sbjct: 117 ILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKI-SDFGTSKRLAGINPCTETFTGTLQY 175
Query: 109 RAPKIL-FGRTNCFAAIDMWAV 129
            AP+I+  G      A D+W++
Sbjct: 176 MAPEIIDKGPRGYGKAADIWSL 197

>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 47  YCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAP--FDAHTTEMV 104
           Y +  G+ Y  ++K IHRDL   N+L   EN  +KI AD G+A++I+    +   T   +
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKI-ADFGLARDINNIDYYKNTTNGRL 221
Query: 105 ILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
            +++ AP+ LF R     + D+W+   L+
Sbjct: 222 PVKWMAPEALFDRVYTHQS-DVWSFGVLM 249

>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 39  SHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEI--DAPF 96
            HLI  + + +  G+ +  +RK IHRDL   N+L   E   VKI  D G+A++I  D  +
Sbjct: 144 EHLIX-YSFQVAKGMEFLASRKXIHRDLAARNILLS-EKNVVKI-XDFGLARDIYKDPDY 200
Query: 97  DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
                  + L++ AP+ +F R     + D+W+   LL
Sbjct: 201 VRKGDARLPLKWMAPETIFDRVYTIQS-DVWSFGVLL 236

>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 47  YCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAP--FDAHTTEMV 104
           Y +  G+ Y  ++K IHRDL   N+L   EN  +KI AD G+A++I+    +   T   +
Sbjct: 210 YQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKI-ADFGLARDINNIDYYKKTTNGRL 267
Query: 105 ILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
            +++ AP+ LF R     + D+W+   L+
Sbjct: 268 PVKWMAPEALFDRVYTHQS-DVWSFGVLM 295

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 10/94 (10%)
Query: 45  FLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMV 104
           F+   + G+ Y H  ++IHRDL   NL  + ++  VKI  D G+A +I+  FD    + +
Sbjct: 147 FMRQTIQGVQYLHNNRVIHRDLKLGNLFLN-DDMDVKI-GDFGLATKIE--FDGERKKXL 202
Query: 105 --ILRYRAPKILFGRTNCFAAIDMWA---VLYLL 133
                Y AP++L  + + F  +D+W+   +LY L
Sbjct: 203 CGTPNYIAPEVLCKKGHSF-EVDIWSLGCILYTL 235

>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 46  LYCILSGISYCHARKIIHRDLTTMNLLADIEN---KTVKIAADSGMAKEIDAPFDAHTTE 102
           L+ I   + Y HA+ ++HRDL   N+L   E+   ++++I  D G AK++ A      T 
Sbjct: 122 LFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRI-CDFGFAKQLRAENGLLMTP 180
Query: 103 MVILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
                + AP++L  R    AA D+W++  LL
Sbjct: 181 CYTANFVAPEVL-ERQGYDAACDIWSLGVLL 210

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRY 108
           IL G+ Y H  +I+HRD+   N+L +  +  +KI +D G +K +        T    L+Y
Sbjct: 131 ILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKI-SDFGTSKRLAGINPCTETFTGTLQY 189
Query: 109 RAPKIL-FGRTNCFAAIDMWAV 129
            AP+I+  G      A D+W++
Sbjct: 190 MAPEIIDKGPRGYGKAADIWSL 211

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAP--FDAHTTEMVIL 106
           + +G++Y   RK +HRDL T N L   EN  VKI AD G+++ I +   + A   + + +
Sbjct: 183 VAAGMAYLSERKFVHRDLATRNCLVG-ENMVVKI-ADFGLSRNIYSADYYKADGNDAIPI 240
Query: 107 RYRAPKILF 115
           R+  P+ +F
Sbjct: 241 RWMPPESIF 249

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query: 5   MKSMSLWVHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHR 64
           +K   LW+      + EY+       + +  P D   I   L  IL G+ Y H+ K IHR
Sbjct: 91  LKGSKLWI------IMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHR 144
Query: 65  DLTTMNLLADIENKTVKIAADSGMAKEI 92
           D+   N+L   E   VK+ AD G+A ++
Sbjct: 145 DIKAANVLLS-EQGDVKL-ADFGVAGQL 170

>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a) Kinase Domain In Complex With Dorsomorphin Length = 322

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 45  FLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTT--E 102
           +L+  + G+   H   I HRD+ + N+L  ++N      AD G+A + +A   A  T  +
Sbjct: 136 YLHEDIPGLKDGHKPAISHRDIKSKNVL--LKNNLTACIADFGLALKFEAGKSAGDTHGQ 193
Query: 103 MVILRYRAPKILFGRTN----CFAAIDMWAVLYLL 133
           +   RY AP++L G  N     F  IDM+A+  +L
Sbjct: 194 VGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVL 228

>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 47  YCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEID--APFDAHTTEMV 104
           Y +  G+ Y  ++K IHRDL   N+L   EN  +KI AD G+A++I+        T   +
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKI-ADFGLARDINNIDXXKKTTNGRL 221
Query: 105 ILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
            +++ AP+ LF R     + D+W+   L+
Sbjct: 222 PVKWMAPEALFDRVYTHQS-DVWSFGVLM 249

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 5   MKSMSLWVHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHR 64
           +KS  LW+      + EY+       + +  P++   I   L  IL G+ Y H+ + IHR
Sbjct: 87  LKSTKLWI------IMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHR 140
Query: 65  DLTTMNLLADIENKTVKIAADSGMAKEI 92
           D+   N+L   E   VK+ AD G+A ++
Sbjct: 141 DIKAANVLLS-EQGDVKL-ADFGVAGQL 166

>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 47  YCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEID--APFDAHTTEMV 104
           Y +  G+ Y  ++K IHRDL   N+L   EN  +KI AD G+A++I+        T   +
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKI-ADFGLARDINNIDXXKKTTNGRL 221
Query: 105 ILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
            +++ AP+ LF R     + D+W+   L+
Sbjct: 222 PVKWMAPEALFDRVYTHQS-DVWSFGVLM 249

>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 15/57 (26%), Positives = 31/57 (54%)
Query: 26  NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKI 82
           +L  +I +  P+     + F   +++ I +CH+R ++HRD+   N+L D+     K+
Sbjct: 125 DLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKL 181

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 10  LWVHKRENLVFEYVNINLHKFIQQYHPMDSHLI----KKFLYCILSGISYCHARKIIHRD 65
           L+  KR N + EY+     + I +   MDS         F   I SG++Y H+  IIHRD
Sbjct: 76  LYKDKRLNFITEYIKGGTLRGIIKS--MDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRD 133
Query: 66  LTTMNLLADIENKTVKIAADSGMAK 90
           L + N L   ENK V + AD G+A+
Sbjct: 134 LNSHNCLVR-ENKNV-VVADFGLAR 156

>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 47  YCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAP--FDAHTTEMV 104
           Y +  G+ Y  ++K IHRDL   N+L   EN  ++I AD G+A++I+    +   T   +
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLV-TENNVMRI-ADFGLARDINNIDYYKKTTNGRL 221
Query: 105 ILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
            +++ AP+ LF R     + D+W+   L+
Sbjct: 222 PVKWMAPEALFDRVYTHQS-DVWSFGVLM 249

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 13/101 (12%)
Query: 39  SHLIKKFLYCILSGISYCHARKIIHRDLTTMNLL--ADIENKTVKIAADSGMAKEIDAPF 96
           SH I++ L  +L    +CH   ++HR+L   NLL  + ++   VK+ AD G+A E++   
Sbjct: 113 SHCIQQILEAVL----HCHQMGVVHRNLKPENLLLASKLKGAAVKL-ADFGLAIEVEGEQ 167
Query: 97  DAHTTEMVILRYRAPKILFGRTNCFA-AIDMWA---VLYLL 133
            A         Y +P++L  R + +   +D+WA   +LY+L
Sbjct: 168 QAWFGFAGTPGYLSPEVL--RKDPYGKPVDLWACGVILYIL 206

>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 10/129 (7%)
Query: 7   SMSLWVHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDL 66
           ++S ++  + N    Y   +L+K          HLI  + + +  G+ +  +RK IHRDL
Sbjct: 120 NLSTYLRSKRNEFVPYKPEDLYKDFLTLE----HLIX-YSFQVAKGMEFLASRKXIHRDL 174
Query: 67  TTMNLLADIENKTVKIAADSGMAKEIDAPFDA--HTTEMVILRYRAPKILFGRTNCFAAI 124
              N+L   E   VKI  D G+A++I    D        + L++ AP+ +F R     + 
Sbjct: 175 AARNILLS-EKNVVKI-CDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQS- 231
Query: 125 DMWAVLYLL 133
           D+W+   LL
Sbjct: 232 DVWSFGVLL 240

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 10/94 (10%)
Query: 45  FLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMV 104
           F+   + G+ Y H  ++IHRDL   NL  + ++  VKI  D G+A +I+  FD    + +
Sbjct: 147 FMRQTIQGVQYLHNNRVIHRDLKLGNLFLN-DDMDVKI-GDFGLATKIE--FDGERKKDL 202
Query: 105 --ILRYRAPKILFGRTNCFAAIDMWA---VLYLL 133
                Y AP++L  + + F  +D+W+   +LY L
Sbjct: 203 CGTPNYIAPEVLCKKGHSF-EVDIWSLGCILYTL 235

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 10/94 (10%)
Query: 45  FLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMV 104
           F+   + G+ Y H  ++IHRDL   NL  + ++  VKI  D G+A +I+  FD    + +
Sbjct: 131 FMRQTIQGVQYLHNNRVIHRDLKLGNLFLN-DDMDVKI-GDFGLATKIE--FDGERKKDL 186
Query: 105 --ILRYRAPKILFGRTNCFAAIDMWA---VLYLL 133
                Y AP++L  + + F  +D+W+   +LY L
Sbjct: 187 CGTPNYIAPEVLCKKGHSF-EVDIWSLGCILYTL 219

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Query: 39  SHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIA-ADSGMAKEIDAPFD 97
           SH I++    IL  I+YCH+  I+HR+L   NLL   + K   +  AD G+A E++    
Sbjct: 108 SHCIQQ----ILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA 163
Query: 98  AHTTEMVILRYRAPKILFGRTNCFAAIDMWA---VLYLL 133
            H        Y +P++L  +      +D+WA   +LY+L
Sbjct: 164 WHGFAGTP-GYLSPEVL-KKDPYSKPVDIWACGVILYIL 200

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Query: 39  SHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIA-ADSGMAKEIDAPFD 97
           SH I++    IL  I+YCH+  I+HR+L   NLL   + K   +  AD G+A E++    
Sbjct: 107 SHCIQQ----ILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA 162
Query: 98  AHTTEMVILRYRAPKILFGRTNCFAAIDMWA---VLYLL 133
            H        Y +P++L  +      +D+WA   +LY+L
Sbjct: 163 WHGFAGT-PGYLSPEVL-KKDPYSKPVDIWACGVILYIL 199

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Query: 39  SHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIA-ADSGMAKEIDAPFD 97
           SH I++    IL  I+YCH+  I+HR+L   NLL   + K   +  AD G+A E++    
Sbjct: 108 SHCIQQ----ILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA 163
Query: 98  AHTTEMVILRYRAPKILFGRTNCFAAIDMWA---VLYLL 133
            H        Y +P++L  +      +D+WA   +LY+L
Sbjct: 164 WHGFAGTP-GYLSPEVL-KKDPYSKPVDIWACGVILYIL 200

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 13/101 (12%)
Query: 39  SHLIKKFLYCILSGISYCHARKIIHRDLTTMNLL--ADIENKTVKIAADSGMAKEIDAPF 96
           SH I++ L  +L    +CH   ++HRDL   NLL  +  +   VK+ AD G+A E+    
Sbjct: 106 SHCIQQILEAVL----HCHQMGVVHRDLKPENLLLASKCKGAAVKL-ADFGLAIEVQGDQ 160
Query: 97  DAHTTEMVILRYRAPKILFGRTNCFA-AIDMWA---VLYLL 133
            A         Y +P++L  R   +   +D+WA   +LY+L
Sbjct: 161 QAWFGFAGTPGYLSPEVL--RKEAYGKPVDIWACGVILYIL 199

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRY 108
           IL G+S+ H  K+IHRD+   N+L   EN  VK+  D G++ ++D       T +    +
Sbjct: 138 ILRGLSHLHQHKVIHRDIKGQNVLL-TENAEVKL-VDFGVSAQLDRTVGRRNTFIGTPYW 195
Query: 109 RAPKILFGRTNCFAAIDMWAVLYLL 133
            AP+++    N  A  D  + L+ L
Sbjct: 196 MAPEVIACDENPDATYDFKSDLWSL 220

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 7/87 (8%)
Query: 45  FLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMV 104
           +L  I+ G  Y H  ++IHRDL   NL  + E+  VKI  D G+A +++  +D    +++
Sbjct: 146 YLRQIVLGCQYLHRNRVIHRDLKLGNLFLN-EDLEVKI-GDFGLATKVE--YDGERKKVL 201
Query: 105 --ILRYRAPKILFGRTNCFAAIDMWAV 129
                Y AP++L  + + F  +D+W++
Sbjct: 202 CGTPNYIAPEVLSKKGHSF-EVDVWSI 227

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 7/87 (8%)
Query: 45  FLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMV 104
           +L  I+ G  Y H  ++IHRDL   NL  + E+  VKI  D G+A +++  +D    +++
Sbjct: 144 YLRQIVLGCQYLHRNRVIHRDLKLGNLFLN-EDLEVKI-GDFGLATKVE--YDGERKKVL 199
Query: 105 --ILRYRAPKILFGRTNCFAAIDMWAV 129
                Y AP++L  + + F  +D+W++
Sbjct: 200 CGTPNYIAPEVLSKKGHSF-EVDVWSI 225

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 7/87 (8%)
Query: 45  FLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMV 104
           +L  I+ G  Y H  ++IHRDL   NL  + E+  VKI  D G+A +++  +D    +++
Sbjct: 120 YLRQIVLGCQYLHRNRVIHRDLKLGNLFLN-EDLEVKI-GDFGLATKVE--YDGERKKVL 175
Query: 105 --ILRYRAPKILFGRTNCFAAIDMWAV 129
                Y AP++L  + + F  +D+W++
Sbjct: 176 CGTPNYIAPEVLSKKGHSF-EVDVWSI 201

>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 39  SHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEI--DAPF 96
            HLI  + + +  G+ +  +RK IHRDL   N+L   E   VKI  D G+A++I  D  +
Sbjct: 144 EHLIC-YSFQVAKGMEFLASRKXIHRDLAARNILLS-EKNVVKI-CDFGLARDIYKDPDY 200
Query: 97  DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
                  + L++ AP+ +F R     + D+W+   LL
Sbjct: 201 VRKGDARLPLKWMAPETIFDRVYTIQS-DVWSFGVLL 236

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 54/100 (54%), Gaps = 12/100 (12%)
Query: 39  SHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIA-ADSGMAKEIDAPFD 97
           SH I++    IL  I+YCH+  I+HR+L   NLL   + K   +  AD G+A E++    
Sbjct: 131 SHCIQQ----ILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA 186
Query: 98  AHTTEMVILRYRAPKILFGRTNCFA-AIDMWA---VLYLL 133
            H        Y +P++L  + + ++  +D+WA   +LY+L
Sbjct: 187 WHGFAGTP-GYLSPEVL--KKDPYSKPVDIWACGVILYIL 223

>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 39  SHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEI--DAPF 96
            HLI  + + +  G+ +  +RK IHRDL   N+L   E   VKI  D G+A++I  D  +
Sbjct: 139 EHLIC-YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKI-CDFGLARDIYKDPDY 195
Query: 97  DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
                  + L++ AP+ +F R     + D+W+   LL
Sbjct: 196 VRKGDARLPLKWMAPETIFDRVYTIQS-DVWSFGVLL 231

>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 47  YCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEID--APFDAHTTEMV 104
           Y +  G+ Y  ++K IHRDL   N+L   E+  +KI AD G+A++I     +   T   +
Sbjct: 146 YQVARGMEYLASKKCIHRDLAARNVLV-TEDNVMKI-ADFGLARDIHHIDYYKKTTNGRL 203
Query: 105 ILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
            +++ AP+ LF R     + D+W+   LL
Sbjct: 204 PVKWMAPEALFDRIYTHQS-DVWSFGVLL 231

>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 39  SHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEI--DAPF 96
            HLI  + + +  G+ +  +RK IHRDL   N+L   E   VKI  D G+A++I  D  +
Sbjct: 139 EHLIC-YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKI-CDFGLARDIYKDPDY 195
Query: 97  DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
                  + L++ AP+ +F R     + D+W+   LL
Sbjct: 196 VRKGDARLPLKWMAPETIFDRVYTIQS-DVWSFGVLL 231

>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 39  SHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEI--DAPF 96
            HLI  + + +  G+ +  +RK IHRDL   N+L   E   VKI  D G+A++I  D  +
Sbjct: 185 EHLIC-YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKI-CDFGLARDIYKDPDY 241
Query: 97  DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
                  + L++ AP+ +F R     + D+W+   LL
Sbjct: 242 VRKGDARLPLKWMAPETIFDRVYTIQS-DVWSFGVLL 277

>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 39  SHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEI--DAPF 96
            HLI  + + +  G+ +  +RK IHRDL   N+L   E   VKI  D G+A++I  D  +
Sbjct: 150 EHLIC-YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKI-CDFGLARDIYKDPDY 206
Query: 97  DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
                  + L++ AP+ +F R     + D+W+   LL
Sbjct: 207 VRKGDARLPLKWMAPETIFDRVYTIQS-DVWSFGVLL 242

>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 2-Anilino-5-Aryl-Oxazole Inhibitor Length = 366

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 39  SHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEI--DAPF 96
            HLI  + + +  G+ +  +RK IHRDL   N+L   E   VKI  D G+A++I  D  +
Sbjct: 198 EHLIC-YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKI-CDFGLARDIYKDPDY 254
Query: 97  DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
                  + L++ AP+ +F R     + D+W+   LL
Sbjct: 255 VRKGDARLPLKWMAPETIFDRVYTIQS-DVWSFGVLL 290

>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel Pyrrolopyrimidine Inhibitor Length = 359

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 39  SHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEI--DAPF 96
            HLI  + + +  G+ +  +RK IHRDL   N+L   E   VKI  D G+A++I  D  +
Sbjct: 193 EHLIC-YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKI-CDFGLARDIYKDPDY 249
Query: 97  DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
                  + L++ AP+ +F R     + D+W+   LL
Sbjct: 250 VRKGDARLPLKWMAPETIFDRVYTIQS-DVWSFGVLL 285

>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With Compound A Length = 356

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 39  SHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEI--DAPF 96
            HLI  + + +  G+ +  +RK IHRDL   N+L   E   VKI  D G+A++I  D  +
Sbjct: 191 EHLIC-YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKI-CDFGLARDIYKDPDY 247
Query: 97  DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
                  + L++ AP+ +F R     + D+W+   LL
Sbjct: 248 VRKGDARLPLKWMAPETIFDRVYTIQS-DVWSFGVLL 283

>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 47  YCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEID--APFDAHTTEMV 104
           Y +  G+ Y  ++K IHRDL   N+L   E+  +KI AD G+A++I     +   T   +
Sbjct: 157 YQVARGMEYLASKKCIHRDLAARNVLV-TEDNVMKI-ADFGLARDIHHIDYYKKTTNGRL 214
Query: 105 ILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
            +++ AP+ LF R     + D+W+   LL
Sbjct: 215 PVKWMAPEALFDRIYTHQS-DVWSFGVLL 242

>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 16/123 (13%)
Query: 22  YVNINLHKFIQQYHPMDSHLIKKFL---------YCILSGISYCHARKIIHRDLTTMNLL 72
           Y+    ++F+    P D  L K FL         + +  G+ +  +RK IHRDL   N+L
Sbjct: 123 YLRSKRNEFVPYKTPED--LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNIL 180
Query: 73  ADIENKTVKIAADSGMAKEIDAPFDA--HTTEMVILRYRAPKILFGRTNCFAAIDMWAVL 130
              E   VKI  D G+A++I    D        + L++ AP+ +F R     + D+W+  
Sbjct: 181 LS-EKNVVKI-CDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQS-DVWSFG 237
Query: 131 YLL 133
            LL
Sbjct: 238 VLL 240

>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Back Pocket Binder Length = 368

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 39  SHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEI--DAPF 96
            HLI  + + +  G+ +  +RK IHRDL   N+L   E   VKI  D G+A++I  D  +
Sbjct: 200 EHLIC-YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKI-CDFGLARDIYKDPDY 256
Query: 97  DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
                  + L++ AP+ +F R     + D+W+   LL
Sbjct: 257 VRKGDARLPLKWMAPETIFDRVYTIQS-DVWSFGVLL 292

>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 39  SHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEI--DAPF 96
            HLI  + + +  G+ +  +RK IHRDL   N+L   E   VKI  D G+A++I  D  +
Sbjct: 148 EHLIC-YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKI-CDFGLARDIYKDPDY 204
Query: 97  DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
                  + L++ AP+ +F R     + D+W+   LL
Sbjct: 205 VRKGDARLPLKWMAPETIFDRVYTIQS-DVWSFGVLL 240

>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 47  YCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEID--APFDAHTTEMV 104
           Y +  G+ Y  ++K IHRDL   N+L   E+  +KI AD G+A++I     +   T   +
Sbjct: 150 YQVARGMEYLASKKCIHRDLAARNVLV-TEDNVMKI-ADFGLARDIHHIDYYKKTTNGRL 207
Query: 105 ILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
            +++ AP+ LF R     + D+W+   LL
Sbjct: 208 PVKWMAPEALFDRIYTHQS-DVWSFGVLL 235

>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine Length = 273

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 26  NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKI 82
           +L  FI +   +   L + F + +L  + +CH   ++HRD+   N+L D+    +K+
Sbjct: 96  DLFDFITERGALQEELARSFFWQVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKL 152

>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 47  YCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEID--APFDAHTTEMV 104
           Y +  G+ Y  ++K IHRDL   N+L   E+  +KI AD G+A++I     +   T   +
Sbjct: 142 YQVARGMEYLASKKCIHRDLAARNVLV-TEDNVMKI-ADFGLARDIHHIDYYKKTTNGRL 199
Query: 105 ILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
            +++ AP+ LF R     + D+W+   LL
Sbjct: 200 PVKWMAPEALFDRIYTHQS-DVWSFGVLL 227

>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 47  YCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEID--APFDAHTTEMV 104
           Y +  G+ Y  ++K IHRDL   N+L   E+  +KI AD G+A++I     +   T   +
Sbjct: 157 YQVARGMEYLASKKCIHRDLAARNVLV-TEDNVMKI-ADFGLARDIHHIDYYKKTTNGRL 214
Query: 105 ILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
            +++ AP+ LF R     + D+W+   LL
Sbjct: 215 PVKWMAPEALFDRIYTHQS-DVWSFGVLL 242

>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 47  YCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEID--APFDAHTTEMV 104
           Y +  G+ Y  ++K IHRDL   N+L   E+  +KI AD G+A++I     +   T   +
Sbjct: 198 YQVARGMEYLASKKCIHRDLAARNVLV-TEDNVMKI-ADFGLARDIHHIDYYKKTTNGRL 255
Query: 105 ILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
            +++ AP+ LF R     + D+W+   LL
Sbjct: 256 PVKWMAPEALFDRIYTHQS-DVWSFGVLL 283

>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 47  YCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEID--APFDAHTTEMV 104
           Y +  G+ Y  ++K IHRDL   N+L   E+  +KI AD G+A++I     +   T   +
Sbjct: 149 YQVARGMEYLASKKCIHRDLAARNVLV-TEDNVMKI-ADFGLARDIHHIDYYKKTTNGRL 206
Query: 105 ILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
            +++ AP+ LF R     + D+W+   LL
Sbjct: 207 PVKWMAPEALFDRIYTHQS-DVWSFGVLL 234

>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 8/109 (7%)
Query: 30  FIQQYHPMDSHLIKKFLYC---ILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADS 86
           F   ++P +    K  + C   +  G+ Y  ++K IHRDL   N+L   E+  +KI AD 
Sbjct: 137 FNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV-TEDNVMKI-ADF 194
Query: 87  GMAKEID--APFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
           G+A++I         T   + +++ AP+ LF R     + D+W+   LL
Sbjct: 195 GLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQS-DVWSFGVLL 242

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 8/108 (7%)
Query: 26  NLHKFIQQYHP---MDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNL-LADIENKTVK 81
           +L K++ Q+     +    I+  L  I S + Y H  +IIHRDL   N+ L     + + 
Sbjct: 105 DLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIH 164
Query: 82  IAADSGMAKEIDAPFDAHTTEMV-ILRYRAPKILFGRTNCFAAIDMWA 128
              D G AKE+D       TE V  L+Y AP++L  +      +D W+
Sbjct: 165 KIIDLGYAKELDQ--GELCTEFVGTLQYLAPELLEQKKYT-VTVDYWS 209

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 8/108 (7%)
Query: 26  NLHKFIQQYHP---MDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNL-LADIENKTVK 81
           +L K++ Q+     +    I+  L  I S + Y H  +IIHRDL   N+ L     + + 
Sbjct: 104 DLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIH 163
Query: 82  IAADSGMAKEIDAPFDAHTTEMV-ILRYRAPKILFGRTNCFAAIDMWA 128
              D G AKE+D       TE V  L+Y AP++L  +      +D W+
Sbjct: 164 KIIDLGYAKELDQ--GELCTEFVGTLQYLAPELLEQKKYT-VTVDYWS 208

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 17/137 (12%)
Query: 8   MSLWVHKREN----LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKII 62
           +  + H+RE     L  EY +   L   I+    M     ++F + +++G+ Y H   I 
Sbjct: 68  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 63  HRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVI------LRYRAPKILFG 116
           HRD+   NLL D E   +KI +D G+A      F  +  E ++      L Y AP++L  
Sbjct: 128 HRDIKPENLLLD-ERDNLKI-SDFGLA----TVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 117 RTNCFAAIDMWAVLYLL 133
           R      +D+W+   +L
Sbjct: 182 REFHAEPVDVWSCGIVL 198

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 17/137 (12%)
Query: 8   MSLWVHKREN----LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKII 62
           +  + H+RE     L  EY +   L   I+    M     ++F + +++G+ Y H   I 
Sbjct: 68  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 63  HRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVI------LRYRAPKILFG 116
           HRD+   NLL D E   +KI +D G+A      F  +  E ++      L Y AP++L  
Sbjct: 128 HRDIKPENLLLD-ERDNLKI-SDFGLA----TVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 117 RTNCFAAIDMWAVLYLL 133
           R      +D+W+   +L
Sbjct: 182 REFHAEPVDVWSCGIVL 198

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 17/137 (12%)
Query: 8   MSLWVHKREN----LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKII 62
           +  + H+RE     L  EY +   L   I+    M     ++F + +++G+ Y H   I 
Sbjct: 68  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 63  HRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVI------LRYRAPKILFG 116
           HRD+   NLL D E   +KI +D G+A      F  +  E ++      L Y AP++L  
Sbjct: 128 HRDIKPENLLLD-ERDNLKI-SDFGLA----TVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 117 RTNCFAAIDMWAVLYLL 133
           R      +D+W+   +L
Sbjct: 182 REFHAEPVDVWSCGIVL 198

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 17/132 (12%)
Query: 8   MSLWVHKREN----LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKII 62
           +  + H+RE     L  EY +   L   I+    M     ++F + +++G+ Y H   I 
Sbjct: 68  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 63  HRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVI------LRYRAPKILFG 116
           HRD+   NLL D E   +KI +D G+A      F  +  E ++      L Y AP++L  
Sbjct: 128 HRDIKPENLLLD-ERDNLKI-SDFGLA----TVFRYNNRERLLNKMXGTLPYVAPELLKR 181
Query: 117 RTNCFAAIDMWA 128
           R      +D+W+
Sbjct: 182 REFHAEPVDVWS 193

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 17/137 (12%)
Query: 8   MSLWVHKREN----LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKII 62
           +  + H+RE     L  EY +   L   I+    M     ++F + +++G+ Y H   I 
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 63  HRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVI------LRYRAPKILFG 116
           HRD+   NLL D E   +KI +D G+A      F  +  E ++      L Y AP++L  
Sbjct: 127 HRDIKPENLLLD-ERDNLKI-SDFGLA----TVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 117 RTNCFAAIDMWAVLYLL 133
           R      +D+W+   +L
Sbjct: 181 REFHAEPVDVWSCGIVL 197

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 17/137 (12%)
Query: 8   MSLWVHKREN----LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKII 62
           +  + H+RE     L  EY +   L   I+    M     ++F + +++G+ Y H   I 
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 63  HRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVI------LRYRAPKILFG 116
           HRD+   NLL D E   +KI +D G+A      F  +  E ++      L Y AP++L  
Sbjct: 127 HRDIKPENLLLD-ERDNLKI-SDFGLA----TVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 117 RTNCFAAIDMWAVLYLL 133
           R      +D+W+   +L
Sbjct: 181 REFHAEPVDVWSCGIVL 197

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 17/137 (12%)
Query: 8   MSLWVHKREN----LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKII 62
           +  + H+RE     L  EY +   L   I+    M     ++F + +++G+ Y H   I 
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 63  HRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVI------LRYRAPKILFG 116
           HRD+   NLL D E   +KI +D G+A      F  +  E ++      L Y AP++L  
Sbjct: 127 HRDIKPENLLLD-ERDNLKI-SDFGLA----TVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 117 RTNCFAAIDMWAVLYLL 133
           R      +D+W+   +L
Sbjct: 181 REFHAEPVDVWSCGIVL 197

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 17/137 (12%)
Query: 8   MSLWVHKREN----LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKII 62
           +  + H+RE     L  EY +   L   I+    M     ++F + +++G+ Y H   I 
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 63  HRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVI------LRYRAPKILFG 116
           HRD+   NLL D E   +KI +D G+A      F  +  E ++      L Y AP++L  
Sbjct: 127 HRDIKPENLLLD-ERDNLKI-SDFGLA----TVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 117 RTNCFAAIDMWAVLYLL 133
           R      +D+W+   +L
Sbjct: 181 REFHAEPVDVWSCGIVL 197

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 17/137 (12%)
Query: 8   MSLWVHKREN----LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKII 62
           +  + H+RE     L  EY +   L   I+    M     ++F + +++G+ Y H   I 
Sbjct: 68  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 63  HRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVI------LRYRAPKILFG 116
           HRD+   NLL D E   +KI +D G+A      F  +  E ++      L Y AP++L  
Sbjct: 128 HRDIKPENLLLD-ERDNLKI-SDFGLA----TVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 117 RTNCFAAIDMWAVLYLL 133
           R      +D+W+   +L
Sbjct: 182 REFHAEPVDVWSCGIVL 198

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 17/137 (12%)
Query: 8   MSLWVHKREN----LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKII 62
           +  + H+RE     L  EY +   L   I+    M     ++F + +++G+ Y H   I 
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 63  HRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVI------LRYRAPKILFG 116
           HRD+   NLL D E   +KI +D G+A      F  +  E ++      L Y AP++L  
Sbjct: 127 HRDIKPENLLLD-ERDNLKI-SDFGLA----TVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 117 RTNCFAAIDMWAVLYLL 133
           R      +D+W+   +L
Sbjct: 181 REFHAEPVDVWSCGIVL 197

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 17/137 (12%)
Query: 8   MSLWVHKREN----LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKII 62
           +  + H+RE     L  EY +   L   I+    M     ++F + +++G+ Y H   I 
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 63  HRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVI------LRYRAPKILFG 116
           HRD+   NLL D E   +KI +D G+A      F  +  E ++      L Y AP++L  
Sbjct: 127 HRDIKPENLLLD-ERDNLKI-SDFGLA----TVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 117 RTNCFAAIDMWAVLYLL 133
           R      +D+W+   +L
Sbjct: 181 REFHAEPVDVWSCGIVL 197

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 17/137 (12%)
Query: 8   MSLWVHKREN----LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKII 62
           +  + H+RE     L  EY +   L   I+    M     ++F + +++G+ Y H   I 
Sbjct: 68  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 63  HRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVI------LRYRAPKILFG 116
           HRD+   NLL D E   +KI +D G+A      F  +  E ++      L Y AP++L  
Sbjct: 128 HRDIKPENLLLD-ERDNLKI-SDFGLA----TVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 117 RTNCFAAIDMWAVLYLL 133
           R      +D+W+   +L
Sbjct: 182 REFHAEPVDVWSCGIVL 198

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 17/137 (12%)
Query: 8   MSLWVHKREN----LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKII 62
           +  + H+RE     L  EY +   L   I+    M     ++F + +++G+ Y H   I 
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 63  HRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVI------LRYRAPKILFG 116
           HRD+   NLL D E   +KI +D G+A      F  +  E ++      L Y AP++L  
Sbjct: 127 HRDIKPENLLLD-ERDNLKI-SDFGLA----TVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 117 RTNCFAAIDMWAVLYLL 133
           R      +D+W+   +L
Sbjct: 181 REFHAEPVDVWSCGIVL 197

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 17/137 (12%)
Query: 8   MSLWVHKREN----LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKII 62
           +  + H+RE     L  EY +   L   I+    M     ++F + +++G+ Y H   I 
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 63  HRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVI------LRYRAPKILFG 116
           HRD+   NLL D E   +KI +D G+A      F  +  E ++      L Y AP++L  
Sbjct: 127 HRDIKPENLLLD-ERDNLKI-SDFGLA----TVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 117 RTNCFAAIDMWAVLYLL 133
           R      +D+W+   +L
Sbjct: 181 REFHAEPVDVWSCGIVL 197

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 17/137 (12%)
Query: 8   MSLWVHKREN----LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKII 62
           +  + H+RE     L  EY +   L   I+    M     ++F + +++G+ Y H   I 
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 63  HRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVI------LRYRAPKILFG 116
           HRD+   NLL D E   +KI +D G+A      F  +  E ++      L Y AP++L  
Sbjct: 127 HRDIKPENLLLD-ERDNLKI-SDFGLA----TVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 117 RTNCFAAIDMWAVLYLL 133
           R      +D+W+   +L
Sbjct: 181 REFHAEPVDVWSCGIVL 197

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 17/137 (12%)
Query: 8   MSLWVHKREN----LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKII 62
           +  + H+RE     L  EY +   L   I+    M     ++F + +++G+ Y H   I 
Sbjct: 68  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 63  HRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVI------LRYRAPKILFG 116
           HRD+   NLL D E   +KI +D G+A      F  +  E ++      L Y AP++L  
Sbjct: 128 HRDIKPENLLLD-ERDNLKI-SDFGLA----TVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 117 RTNCFAAIDMWAVLYLL 133
           R      +D+W+   +L
Sbjct: 182 REFHAEPVDVWSCGIVL 198

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 17/137 (12%)
Query: 8   MSLWVHKREN----LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKII 62
           +  + H+RE     L  EY +   L   I+    M     ++F + +++G+ Y H   I 
Sbjct: 66  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 125
Query: 63  HRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVI------LRYRAPKILFG 116
           HRD+   NLL D E   +KI +D G+A      F  +  E ++      L Y AP++L  
Sbjct: 126 HRDIKPENLLLD-ERDNLKI-SDFGLA----TVFRYNNRERLLNKMCGTLPYVAPELLKR 179
Query: 117 RTNCFAAIDMWAVLYLL 133
           R      +D+W+   +L
Sbjct: 180 REFHAEPVDVWSCGIVL 196

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 17/137 (12%)
Query: 8   MSLWVHKREN----LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKII 62
           +  + H+RE     L  EY +   L   I+    M     ++F + +++G+ Y H   I 
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 63  HRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVI------LRYRAPKILFG 116
           HRD+   NLL D E   +KI +D G+A      F  +  E ++      L Y AP++L  
Sbjct: 127 HRDIKPENLLLD-ERDNLKI-SDFGLA----TVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 117 RTNCFAAIDMWAVLYLL 133
           R      +D+W+   +L
Sbjct: 181 REFHAEPVDVWSCGIVL 197

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 17/137 (12%)
Query: 8   MSLWVHKREN----LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKII 62
           +  + H+RE     L  EY +   L   I+    M     ++F + +++G+ Y H   I 
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 63  HRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVI------LRYRAPKILFG 116
           HRD+   NLL D E   +KI +D G+A      F  +  E ++      L Y AP++L  
Sbjct: 127 HRDIKPENLLLD-ERDNLKI-SDFGLA----TVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 117 RTNCFAAIDMWAVLYLL 133
           R      +D+W+   +L
Sbjct: 181 REFHAEPVDVWSCGIVL 197

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 17/137 (12%)
Query: 8   MSLWVHKREN----LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKII 62
           +  + H+RE     L  EY +   L   I+    M     ++F + +++G+ Y H   I 
Sbjct: 68  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 63  HRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVI------LRYRAPKILFG 116
           HRD+   NLL D E   +KI +D G+A      F  +  E ++      L Y AP++L  
Sbjct: 128 HRDIKPENLLLD-ERDNLKI-SDFGLA----TVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 117 RTNCFAAIDMWAVLYLL 133
           R      +D+W+   +L
Sbjct: 182 REFHAEPVDVWSCGIVL 198

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 17/137 (12%)
Query: 8   MSLWVHKREN----LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKII 62
           +  + H+RE     L  EY +   L   I+    M     ++F + +++G+ Y H   I 
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 63  HRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVI------LRYRAPKILFG 116
           HRD+   NLL D E   +KI +D G+A      F  +  E ++      L Y AP++L  
Sbjct: 127 HRDIKPENLLLD-ERDNLKI-SDFGLA----TVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 117 RTNCFAAIDMWAVLYLL 133
           R      +D+W+   +L
Sbjct: 181 REFHAEPVDVWSCGIVL 197

>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303

Iteration: 1
 Score = 39.7 bits (91), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFD 97
           IL  +SY H++ IIHR+L   N+  D E++ VKI  D G+AK +    D
Sbjct: 125 ILEALSYIHSQGIIHRNLKPXNIFID-ESRNVKI-GDFGLAKNVHRSLD 171

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 39.7 bits (91), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 17  NLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
            LV EYV +   +     H +    +  F   I  G++Y HA+  IHRDL   N+L D  
Sbjct: 111 QLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLD-N 169
Query: 77  NKTVKIAADSGMAKEI 92
           ++ VKI  D G+AK +
Sbjct: 170 DRLVKI-GDFGLAKAV 184

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 15/119 (12%)
Query: 19  VFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK 78
           +FE + IN HKF       D       +  ILSGI Y H   I+HRD+   N+L + +N 
Sbjct: 133 LFEQI-INRHKF-------DECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNS 184
Query: 79  TVKIA-ADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWA---VLYLL 133
            + I   D G++      +      +    Y AP++L  + N     D+W+   ++Y+L
Sbjct: 185 LLNIKIVDFGLSSFFSKDYKLR-DRLGTAYYIAPEVLKKKYN--EKCDVWSCGVIMYIL 240

>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Query: 45  FLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMV 104
           F   ++SG+SYCHA ++ HRDL   N L D          D G +K         +T + 
Sbjct: 120 FFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST-VG 178
Query: 105 ILRYRAPKILFGRTNCFAAIDMWA 128
              Y AP++L  +       D+W+
Sbjct: 179 TPAYIAPEVLLKKEYDGKVADVWS 202

>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor Length = 276

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 26  NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKI 82
           +L  FI +   +   L + F + +L  + +CH   ++HRD+   N+L D+    +K+
Sbjct: 99  DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL 155

>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Query: 45  FLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMV 104
           F   ++SG+SYCHA ++ HRDL   N L D          D G +K         +T + 
Sbjct: 119 FFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST-VG 177
Query: 105 ILRYRAPKILFGRTNCFAAIDMWA 128
              Y AP++L  +       D+W+
Sbjct: 178 TPAYIAPEVLLKKEYDGKVADVWS 201

>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As Potent Pim-1 Inhibitors Length = 299

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 26  NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKI 82
           +L  FI +   +   L + F + +L  + +CH   ++HRD+   N+L D+    +K+
Sbjct: 101 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL 157

>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 26  NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKI 82
           +L  FI +   +   L + F + +L  + +CH   ++HRD+   N+L D+    +K+
Sbjct: 100 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL 156

>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546 Length = 308

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 26  NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKI 82
           +L  FI +   +   L + F + +L  + +CH   ++HRD+   N+L D+    +K+
Sbjct: 123 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL 179

>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As Potent, Highly Selective And Orally Bioavailable Pim Kinases Inhibitors Length = 294

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 26  NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKI 82
           +L  FI +   +   L + F + +L  + +CH   ++HRD+   N+L D+    +K+
Sbjct: 101 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL 157

>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 39  SHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDA 98
            HLI  + + +  G+ +  +RK IHRDL   N+L   E   VKI  D G+A++I    D 
Sbjct: 148 EHLIC-YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKI-CDFGLARDIXKDPDX 204
Query: 99  --HTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
                  + L++ AP+ +F R     + D+W+   LL
Sbjct: 205 VRKGDARLPLKWMAPETIFDRVYTIQS-DVWSFGVLL 240

>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target Of Aberrant Somatic Hypermutations In Diffuse Large Cell Lymphoma Length = 293

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 26  NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKI 82
           +L  FI +   +   L + F + +L  + +CH   ++HRD+   N+L D+    +K+
Sbjct: 100 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL 156

>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors Length = 273

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 26  NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKI 82
           +L  FI +   +   L + F + +L  + +CH   ++HRD+   N+L D+    +K+
Sbjct: 96  DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL 152

>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7- Azaindole Length = 273

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 26  NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKI 82
           +L  FI +   +   L + F + +L  + +CH   ++HRD+   N+L D+    +K+
Sbjct: 96  DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL 152

>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 39  SHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDA 98
            HLI  + + +  G+ +  +RK IHRDL   N+L   E   VKI  D G+A++I    D 
Sbjct: 139 EHLIC-YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKI-CDFGLARDIXKDPDX 195
Query: 99  --HTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
                  + L++ AP+ +F R     + D+W+   LL
Sbjct: 196 VRKGDARLPLKWMAPETIFDRVYTIQS-DVWSFGVLL 231

>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 26  NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKI 82
           +L  FI +   +   L + F + +L  + +CH   ++HRD+   N+L D+    +K+
Sbjct: 116 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL 172

>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 39  SHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDA 98
            HLI  + + +  G+ +  +RK IHRDL   N+L   E   VKI  D G+A++I    D 
Sbjct: 139 EHLIC-YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKI-CDFGLARDIXKDPDX 195
Query: 99  --HTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
                  + L++ AP+ +F R     + D+W+   LL
Sbjct: 196 VRKGDARLPLKWMAPETIFDRVYTIQS-DVWSFGVLL 231

>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa Length = 300

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 26  NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKI 82
           +L  FI +   +   L + F + +L  + +CH   ++HRD+   N+L D+    +K+
Sbjct: 115 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL 171

>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small Molecule Inhibitor Length = 298

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 26  NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKI 82
           +L  FI +   +   L + F + +L  + +CH   ++HRD+   N+L D+    +K+
Sbjct: 101 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL 157

>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution Length = 300

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 26  NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKI 82
           +L  FI +   +   L + F + +L  + +CH   ++HRD+   N+L D+    +K+
Sbjct: 115 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL 171

>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 26  NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKI 82
           +L  FI +   +   L + F + +L  + +CH   ++HRD+   N+L D+    +K+
Sbjct: 116 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL 172

>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 26  NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKI 82
           +L  FI +   +   L + F + +L  + +CH   ++HRD+   N+L D+    +K+
Sbjct: 116 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL 172

>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4- Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One Length = 328

Iteration: 1
 Score = 39.3 bits (90), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 26  NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKI 82
           +L  FI +   +   L + F + +L  + +CH   ++HRD+   N+L D+    +K+
Sbjct: 143 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL 199

>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 26  NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKI 82
           +L  FI +   +   L + F + +L  + +CH   ++HRD+   N+L D+    +K+
Sbjct: 143 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL 199

>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus Peptide Pimtide Length = 313

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 26  NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKI 82
           +L  FI +   +   L + F + +L  + +CH   ++HRD+   N+L D+    +K+
Sbjct: 128 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL 184

>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And The Jnk Inhibitor V Length = 314

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 26  NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKI 82
           +L  FI +   +   L + F + +L  + +CH   ++HRD+   N+L D+    +K+
Sbjct: 129 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL 185

>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261 Length = 313

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 26  NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKI 82
           +L  FI +   +   L + F + +L  + +CH   ++HRD+   N+L D+    +K+
Sbjct: 128 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL 184

>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of P27kip1 Carboxy-Terminal Peptide Length = 320

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 26  NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKI 82
           +L  FI +   +   L + F + +L  + +CH   ++HRD+   N+L D+    +K+
Sbjct: 135 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL 191

>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Naphtho-Difuran Ligand Length = 313

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 26  NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKI 82
           +L  FI +   +   L + F + +L  + +CH   ++HRD+   N+L D+    +K+
Sbjct: 129 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL 185

>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Pyrrolo[2,3- A]carbazole Ligand Length = 313

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 26  NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKI 82
           +L  FI +   +   L + F + +L  + +CH   ++HRD+   N+L D+    +K+
Sbjct: 129 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL 185

>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531 Length = 312

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 26  NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKI 82
           +L  FI +   +   L + F + +L  + +CH   ++HRD+   N+L D+    +K+
Sbjct: 128 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL 184

>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain Length = 313

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 26  NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKI 82
           +L  FI +   +   L + F + +L  + +CH   ++HRD+   N+L D+    +K+
Sbjct: 128 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL 184

>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With Inhibitor Length = 333

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 26  NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKI 82
           +L  FI +   +   L + F + +L  + +CH   ++HRD+   N+L D+    +K+
Sbjct: 148 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL 204

>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 26  NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKI 82
           +L  FI +   +   L + F + +L  + +CH   ++HRD+   N+L D+    +K+
Sbjct: 143 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL 199

>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Beta Carboline Ligand I Length = 314

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 26  NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKI 82
           +L  FI +   +   L + F + +L  + +CH   ++HRD+   N+L D+    +K+
Sbjct: 129 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL 185

>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316

Iteration: 1
 Score = 38.9 bits (89), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 39  SHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEI--DAPF 96
            HLI  + + +  G+ +  +RK IHRDL   N+L   E   VKI  D G+A++I  D   
Sbjct: 148 EHLIC-YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKI-CDFGLARDIYKDPDX 204
Query: 97  DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
                  + L++ AP+ +F R     + D+W+   LL
Sbjct: 205 VRKGDARLPLKWMAPETIFDRVYTIQS-DVWSFGVLL 240

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	135
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	3e-33
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	1e-32
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	2e-32
3o0g_A	292	Cell division protein kinase 5; kinase activator c	7e-32
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	2e-31
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	2e-31
3niz_A	311	Rhodanese family protein; structural genomics, str	3e-31
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	5e-31
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	5e-31
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	3e-30
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	8e-30
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	5e-29
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	2e-28
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	2e-28
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	5e-27
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	1e-26
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	2e-26
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	3e-26
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	3e-24
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	2e-23
3rp9_A	458	Mitogen-activated protein kinase; structural genom	4e-21
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	1e-20
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	3e-20
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	4e-20
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	5e-20
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	1e-19
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	2e-19
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	8e-19
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	1e-18
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	4e-18
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	5e-18
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	9e-18
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	2e-17
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	3e-17
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	4e-15
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	6e-15
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	3e-14
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	1e-13
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	2e-13
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	3e-13
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	4e-13
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	7e-13
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	7e-13
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	8e-13
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	8e-13
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	1e-12
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	1e-12
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	2e-12
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	2e-12
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	2e-12
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	3e-12
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	4e-12
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	4e-12
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	4e-12
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	4e-12
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	4e-12
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	4e-12
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	5e-12
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	5e-12
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	6e-12
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	7e-12
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	7e-12
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	9e-12
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	1e-11
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	1e-11
2a19_B	284	Interferon-induced, double-stranded RNA-activated	1e-11
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	2e-11
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	2e-11
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	2e-11
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	2e-11
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	2e-11
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	2e-11
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	2e-11
3q4u_A	301	Activin receptor type-1; structural genomics conso	3e-11
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	4e-11
3soc_A	322	Activin receptor type-2A; structural genomics cons	4e-11
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	4e-11
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	5e-11
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	5e-11
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	5e-11
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	6e-11
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	6e-11
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	7e-11
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	8e-11
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	9e-11
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	1e-10
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	1e-10
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	1e-10
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	1e-10
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	2e-10
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	4e-10
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	4e-10
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	5e-10
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	6e-10
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	7e-10
3ork_A	311	Serine/threonine protein kinase; structural genomi	7e-10
3bhy_A	283	Death-associated protein kinase 3; death associate	8e-10
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	8e-10
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	8e-10
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	9e-10
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	1e-09
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	1e-09
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	1e-09
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	2e-09
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	3e-09
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	3e-09
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	3e-09
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	3e-09
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	4e-09
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	4e-09
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	5e-09
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	6e-09
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	7e-09
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	8e-09
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	9e-09
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	9e-09
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	9e-09
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	1e-08
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	1e-08
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	1e-08
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	1e-08
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	1e-08
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	1e-08
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	2e-08
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	2e-08
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	2e-08
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	3e-08
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	4e-08
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	4e-08
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	5e-08
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	6e-08
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	7e-08
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	7e-08
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	7e-08
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	8e-08
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	8e-08
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	2e-07
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	2e-07
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	2e-07
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	2e-07
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	3e-07
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	3e-07
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	3e-07
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	3e-07
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	3e-07
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	4e-07
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	4e-07
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	4e-07
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	5e-07
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	5e-07
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	7e-07
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	7e-07
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	8e-07
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	9e-07
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	1e-06
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	1e-06
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	1e-06
3pls_A	298	Macrophage-stimulating protein receptor; protein k	1e-06
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	1e-06
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	1e-06
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	2e-06
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	2e-06
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	2e-06
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	3e-06
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	3e-06
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	3e-06
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	3e-06
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	3e-06
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	3e-06
4aoj_A	329	High affinity nerve growth factor receptor; transf	3e-06
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	4e-06
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	4e-06
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	4e-06
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	4e-06
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	5e-06
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	5e-06
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	5e-06
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	5e-06
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	5e-06
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	6e-06
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	6e-06
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	7e-06
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	1e-05
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	1e-05
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	1e-05
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	1e-05
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	1e-05
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	2e-05
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	2e-05
2dyl_A	318	Dual specificity mitogen-activated protein kinase	2e-05
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	2e-05
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	2e-05
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	2e-05
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	3e-05
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	3e-05
3an0_A	340	Dual specificity mitogen-activated protein kinase;	3e-05
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	3e-05
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	4e-05
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	4e-05
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	4e-05
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	4e-05
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	5e-05
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	6e-05
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	6e-05
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	6e-05
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	6e-05
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	6e-05
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	6e-05
3fme_A	290	Dual specificity mitogen-activated protein kinase;	7e-05
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	7e-05
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	9e-05
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	1e-04
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	1e-04
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	1e-04
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	1e-04
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	1e-04
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	1e-04
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	2e-04
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	2e-04
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	2e-04
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	2e-04
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	3e-04
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	3e-04
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	3e-04
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	4e-04
3aln_A	327	Dual specificity mitogen-activated protein kinase;	4e-04
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	5e-04
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	5e-04
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	9e-04

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score =  117 bits (296), Expect = 3e-33
 Identities = 40/117 (34%), Positives = 72/117 (61%), Gaps = 3/117 (2%)

Query: 14  KRENLVFEYVNINLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLL 72
           KR  LVFE+V+  +   ++ + + +D  +++K+L+ I++GI +CH+  IIHRD+   N+L
Sbjct: 97  KRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENIL 156

Query: 73  ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
              ++  VK+  D G A+ + AP + +  E+    YRAP++L G      A+D+WA+
Sbjct: 157 VS-QSGVVKL-CDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAI 211

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score =  115 bits (291), Expect = 1e-32
 Identities = 39/117 (33%), Positives = 71/117 (60%), Gaps = 5/117 (4%)

Query: 17  NLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           +L+FEY   +L K++ +   +   +IK FLY +++G+++CH+R+ +HRDL   NLL  + 
Sbjct: 109 HLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVS 168

Query: 77  NKT----VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           + +    +KI  D G+A+    P    T E++ L YR P+IL G  +   ++D+W++
Sbjct: 169 DASETPVLKI-GDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSI 224

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score =  114 bits (289), Expect = 2e-32
 Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 3/114 (2%)

Query: 17  NLVFEYVNINLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           +LVFEY +  +   + +Y   +  HL+K   +  L  +++CH    IHRD+   N+L   
Sbjct: 78  HLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILIT- 136

Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           ++  +K+  D G A+ +  P D +  E+    YR+P++L G T     +D+WA+
Sbjct: 137 KHSVIKL-CDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAI 189

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score =  113 bits (285), Expect = 7e-32
 Identities = 41/114 (35%), Positives = 68/114 (59%), Gaps = 3/114 (2%)

Query: 17  NLVFEYVNINLHKFIQQYH-PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
            LVFE+ + +L K+    +  +D  ++K FL+ +L G+ +CH+R ++HRDL   NLL + 
Sbjct: 77  TLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLIN- 135

Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            N  +K+ A+ G+A+    P   ++ E+V L YR P +LFG      +IDMW+ 
Sbjct: 136 RNGELKL-ANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSA 188

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score =  112 bits (282), Expect = 2e-31
 Identities = 45/114 (39%), Positives = 67/114 (58%), Gaps = 3/114 (2%)

Query: 17  NLVFEYVNINLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
            LVFE+++ +L K +      ++S   K FL  +L+GI+YCH R+++HRDL   NLL + 
Sbjct: 76  VLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLIN- 134

Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
               +KI AD G+A+    P   +T E+V L YRAP +L G       ID+W+V
Sbjct: 135 REGELKI-ADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSV 187

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score =  111 bits (281), Expect = 3e-31
 Identities = 40/114 (35%), Positives = 68/114 (59%), Gaps = 3/114 (2%)

Query: 17  NLVFEYVNINLHKFIQQYH-PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
            LVFE++  +L K + +    +    IK +LY +L G+++CH  +I+HRDL   NLL + 
Sbjct: 95  TLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLIN- 153

Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            +  +K+ AD G+A+    P  ++T E+V L YRAP +L G      ++D+W++
Sbjct: 154 SDGALKL-ADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSI 206

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score =  111 bits (281), Expect = 5e-31
 Identities = 46/121 (38%), Positives = 73/121 (60%), Gaps = 5/121 (4%)

Query: 12  VHKREN--LVFEYVNINLHKFIQQYH-PMDSHLIKKFLYCILSGISYCHARKIIHRDLTT 68
           +H  ++  LVFEY++ +L +++      ++ H +K FL+ +L G++YCH +K++HRDL  
Sbjct: 69  IHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKP 128

Query: 69  MNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWA 128
            NLL + E   +K+ AD G+A+    P   +  E+V L YR P IL G T+    IDMW 
Sbjct: 129 QNLLIN-ERGELKL-ADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWG 186

Query: 129 V 129
           V
Sbjct: 187 V 187

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score =  111 bits (280), Expect = 5e-31
 Identities = 39/119 (32%), Positives = 69/119 (57%), Gaps = 8/119 (6%)

Query: 17  NLVFEYVNINLHKFIQQY------HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMN 70
            LVFE+++ +L K++           ++ +L+K F + +L G+++CH  KI+HRDL   N
Sbjct: 79  TLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQN 138

Query: 71  LLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           LL + +   +K+  D G+A+    P +  ++E+V L YRAP +L G      +ID+W+ 
Sbjct: 139 LLIN-KRGQLKL-GDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSC 195

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score =  110 bits (278), Expect = 3e-30
 Identities = 39/117 (33%), Positives = 63/117 (53%), Gaps = 6/117 (5%)

Query: 17  NLVFEYVNINLHKFIQQY----HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLL 72
           NLV EYV   +++  + Y      M   LIK ++Y +L  ++Y H+  I HRD+   NLL
Sbjct: 114 NLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLL 173

Query: 73  ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            D  +  +K+  D G AK +    + + + +    YRAP+++FG TN    ID+W+ 
Sbjct: 174 LDPPSGVLKL-IDFGSAKILI-AGEPNVSYICSRYYRAPELIFGATNYTTNIDIWST 228

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score =  108 bits (273), Expect = 8e-30
 Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 5/121 (4%)

Query: 12  VHKREN--LVFEYVNINLHKFIQQYH-PMDSHLIKKFLYCILSGISYCHARKIIHRDLTT 68
              + N  LVF+++  +L   I+     +    IK ++   L G+ Y H   I+HRDL  
Sbjct: 81  FGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKP 140

Query: 69  MNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWA 128
            NLL D EN  +K+ AD G+AK   +P  A+T ++V   YRAP++LFG       +DMWA
Sbjct: 141 NNLLLD-ENGVLKL-ADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWA 198

Query: 129 V 129
           V
Sbjct: 199 V 199

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score =  106 bits (266), Expect = 5e-29
 Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 6/115 (5%)

Query: 17  NLVFEYVNINLHKFI--QQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
            LVFE+V+ +L  ++       + +  IK  +   L G+ + HA  I+HRDL   N+L  
Sbjct: 95  TLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVT 154

Query: 75  IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
               TVK+ AD G+A+       A T  +V L YRAP++L   T     +DMW+V
Sbjct: 155 -SGGTVKL-ADFGLARIYSYQM-ALTPVVVTLWYRAPEVLLQSTYA-TPVDMWSV 205

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score =  106 bits (267), Expect = 2e-28
 Identities = 33/117 (28%), Positives = 64/117 (54%), Gaps = 6/117 (5%)

Query: 17  NLVFEYVNINLHKFIQQY----HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLL 72
           NLV +YV   +++  + Y      +    +K ++Y +   ++Y H+  I HRD+   NLL
Sbjct: 129 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 188

Query: 73  ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            D +   +K+  D G AK++    + + + +    YRAP+++FG T+  ++ID+W+ 
Sbjct: 189 LDPDTAVLKL-CDFGSAKQLV-RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSA 243

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score =  104 bits (263), Expect = 2e-28
 Identities = 33/131 (25%), Positives = 68/131 (51%), Gaps = 6/131 (4%)

Query: 1   MQEMMKSMSLWVHKRENLVFEYVNINLHKFIQQYHP--MDSHLIKKFLYCILSGISYCHA 58
           + ++          +  LVFE+V+ +L  ++ +     + +  IK  ++ +L G+ + H+
Sbjct: 79  LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 138

Query: 59  RKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRT 118
            +++HRDL   N+L    +  +K+ AD G+A+         T+ +V L YRAP++L   +
Sbjct: 139 HRVVHRDLKPQNILVT-SSGQIKL-ADFGLARIYSFQMA-LTSVVVTLWYRAPEVLLQSS 195

Query: 119 NCFAAIDMWAV 129
                +D+W+V
Sbjct: 196 YA-TPVDLWSV 205

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score =  102 bits (256), Expect = 5e-27
 Identities = 42/127 (33%), Positives = 62/127 (48%), Gaps = 16/127 (12%)

Query: 18  LVFEYVNINLHKFI---------QQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTT 68
           L+F+Y   +L   I         ++   +   ++K  LY IL GI Y HA  ++HRDL  
Sbjct: 97  LLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKP 156

Query: 69  MNLLADIENK---TVKIAADSGMAKEIDAPFDAHTT---EMVILRYRAPKILFGRTNCFA 122
            N+L   E      VKI AD G A+  ++P          +V   YRAP++L G  +   
Sbjct: 157 ANILVMGEGPERGRVKI-ADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTK 215

Query: 123 AIDMWAV 129
           AID+WA+
Sbjct: 216 AIDIWAI 222

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score =  100 bits (251), Expect = 1e-26
 Identities = 34/137 (24%), Positives = 66/137 (48%), Gaps = 10/137 (7%)

Query: 1   MQEMMKSMSLWVHKREN---LVFEYVNINLHKFIQQYH-PMDSHLIKKFLYCILSGISYC 56
           + E+ ++ +   ++ +    LVF++   +L   +           IK+ +  +L+G+ Y 
Sbjct: 81  LIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYI 140

Query: 57  HARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAH----TTEMVILRYRAPK 112
           H  KI+HRD+   N+L    +  +K+ AD G+A+      ++     T  +V L YR P+
Sbjct: 141 HRNKILHRDMKAANVLIT-RDGVLKL-ADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPE 198

Query: 113 ILFGRTNCFAAIDMWAV 129
           +L G  +    ID+W  
Sbjct: 199 LLLGERDYGPPIDLWGA 215

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score =  100 bits (251), Expect = 2e-26
 Identities = 34/117 (29%), Positives = 64/117 (54%), Gaps = 6/117 (5%)

Query: 17  NLVFEYVNINLHKFIQQY----HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLL 72
           N++ EYV   LHK ++ +      +  +LI  ++Y +   + + H+  I HRD+   NLL
Sbjct: 114 NVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLL 173

Query: 73  ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            + ++ T+K+  D G AK++  P +     +    YRAP+++ G T    +ID+W++
Sbjct: 174 VNSKDNTLKL-CDFGSAKKLI-PSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSI 228

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 99.7 bits (249), Expect = 3e-26
 Identities = 37/119 (31%), Positives = 63/119 (52%), Gaps = 8/119 (6%)

Query: 17  NLVFEYVNINLHKFIQQYH----PMDSHLIKKFLYCILSGISYCHAR--KIIHRDLTTMN 70
           N+V EYV   LH+  + Y+         LIK FL+ ++  I   H     + HRD+   N
Sbjct: 102 NVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHN 161

Query: 71  LLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           +L +  + T+K+  D G AK++  P + +   +    YRAP+++FG  +   A+D+W+V
Sbjct: 162 VLVNEADGTLKLC-DFGSAKKLS-PSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSV 218

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 93.9 bits (234), Expect = 3e-24
 Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 6/119 (5%)

Query: 12  VHKRENLVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMN 70
           V +   LVFE+V N +  +  Q     D   I+ ++Y IL  + YCH+  I+HRD+   N
Sbjct: 104 VSRTPALVFEHVNNTDFKQLYQTLTDYD---IRFYMYEILKALDYCHSMGIMHRDVKPHN 160

Query: 71  LLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           ++ D E++ +++  D G+A E   P   +   +    ++ P++L        ++DMW++
Sbjct: 161 VMIDHEHRKLRL-IDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSL 217

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 91.6 bits (228), Expect = 2e-23
 Identities = 37/115 (32%), Positives = 65/115 (56%), Gaps = 5/115 (4%)

Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           +V EY+  +L   ++Q   ++ H  + F+Y +L G+ Y H+  ++HRDL   NL  + E+
Sbjct: 99  IVQEYMETDLANVLEQGPLLEEH-ARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTED 157

Query: 78  KTVKIAADSGMAKEIDAPFDAHT--TEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+ +D  +      +E ++ + YR+P++L    N   AIDMWA 
Sbjct: 158 LVLKI-GDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAA 211

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 86.8 bits (215), Expect = 4e-21
 Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 29/139 (20%)

Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           +V E  + +  K  +    +    IK  LY +L G+ Y H+  I+HRDL   N L + ++
Sbjct: 134 VVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVN-QD 192

Query: 78  KTVKIAADSGMAKEIDAPFDAHT--------------------------TEMVILR-YRA 110
            +VK+  D G+A+ +D P + ++                          T  V+ R YRA
Sbjct: 193 CSVKV-CDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRA 251

Query: 111 PKILFGRTNCFAAIDMWAV 129
           P+++  + N   AID+W++
Sbjct: 252 PELILLQENYTEAIDVWSI 270

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 84.6 bits (210), Expect = 1e-20
 Identities = 41/115 (35%), Positives = 62/115 (53%), Gaps = 6/115 (5%)

Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           +V + +  +L+K ++  H  + H I  FLY IL G+ Y H+  ++HRDL   NLL +   
Sbjct: 107 IVQDLMETDLYKLLKTQHLSNDH-ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN-TT 164

Query: 78  KTVKIAADSGMAKEIDAPFDAHT--TEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+  D   D     TE V  R YRAP+I+        +ID+W+V
Sbjct: 165 CDLKI-CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 218

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 83.5 bits (207), Expect = 3e-20
 Identities = 38/115 (33%), Positives = 58/115 (50%), Gaps = 8/115 (6%)

Query: 18  LVFEYVNINLHKFI--QQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           LV E +  +L + I  Q+      H I+ F+Y IL G+   H   ++HRDL   N+L   
Sbjct: 111 LVTELMRTDLAQVIHDQRIVISPQH-IQYFMYHILLGLHVLHEAGVVHRDLHPGNILLA- 168

Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
           +N  + I  D  +A+E  A  DA+ T  V  R YRAP+++         +DMW+ 
Sbjct: 169 DNNDITI-CDFNLAREDTA--DANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSA 220

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 83.7 bits (207), Expect = 4e-20
 Identities = 38/113 (33%), Positives = 59/113 (52%), Gaps = 8/113 (7%)

Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV E ++ NL + IQ    +D   +   LY +L GI + H+  IIHRDL   N++    +
Sbjct: 144 LVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK-SD 200

Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
            T+KI  D G+A+          T  V+ R YRAP+++ G       +D+W+V
Sbjct: 201 CTLKI-LDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSV 249

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 82.7 bits (205), Expect = 5e-20
 Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 9/113 (7%)

Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV  ++  +L K +      +   I+  +Y +L G+ Y H+  ++HRDL   NL  + E+
Sbjct: 106 LVMPFMQTDLQKIMGL-KFSEEK-IQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVN-ED 162

Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+      DA  T  V+ R YRAP+++    +    +D+W+V
Sbjct: 163 CELKI-LDFGLAR----HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSV 210

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 82.0 bits (203), Expect = 1e-19
 Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 8/113 (7%)

Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV  ++  +L K ++     +   I+  +Y +L G+ Y HA  IIHRDL   NL  + E+
Sbjct: 107 LVMPFMGTDLGKLMKHEKLGEDR-IQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVN-ED 164

Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+      D+  T  V+ R YRAP+++         +D+W+V
Sbjct: 165 CELKI-LDFGLAR----QADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSV 212

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 81.6 bits (202), Expect = 2e-19
 Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 8/113 (7%)

Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV   +  +L+  ++     D H ++  +Y IL G+ Y H+  IIHRDL   NL  + E+
Sbjct: 111 LVTHLMGADLNNIVKCQKLTDDH-VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-ED 168

Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G+A+          T  V  R YRAP+I+    +    +D+W+V
Sbjct: 169 CELKI-LDFGLARHTADEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSV 216

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 79.6 bits (197), Expect = 8e-19
 Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 13/122 (10%)

Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           ++ E +  +LH+ I      D H I+ F+Y  L  +   H   +IHRDL   NLL +  N
Sbjct: 91  IIQELMQTDLHRVISTQMLSDDH-IQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLIN-SN 148

Query: 78  KTVKIAADSGMAKEIDAPFDAHT---------TEMVILR-YRAPKILFGRTNCFAAIDMW 127
             +K+  D G+A+ ID     ++          E V  R YRAP+++        A+D+W
Sbjct: 149 CDLKV-CDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVW 207

Query: 128 AV 129
           + 
Sbjct: 208 SC 209

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 79.0 bits (195), Expect = 1e-18
 Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 8/113 (7%)

Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           +V E ++ NL + IQ         +   LY +L GI + H+  IIHRDL   N++    +
Sbjct: 107 IVMELMDANLCQVIQM-ELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK-SD 163

Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILR-YRAPKILFGRTNCFAAIDMWAV 129
            T+KI  D G+A+          T  V+ R YRAP+++ G       +D+W+V
Sbjct: 164 CTLKI-LDFGLARTAGT--SFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSV 212

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 77.9 bits (192), Expect = 4e-18
 Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 24/134 (17%)

Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           +V E  + +L K  +    +    IK  LY +L G ++ H   IIHRDL   N L + ++
Sbjct: 107 IVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLN-QD 165

Query: 78  KTVKIAADSGMAKEIDAPFDAHT---------------------TEMVILR-YRAPKILF 115
            +VK+  D G+A+ I++  D +                      T  V+ R YRAP+++ 
Sbjct: 166 CSVKV-CDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELIL 224

Query: 116 GRTNCFAAIDMWAV 129
            + N   +ID+W+ 
Sbjct: 225 LQENYTKSIDIWST 238

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 77.8 bits (192), Expect = 5e-18
 Identities = 37/133 (27%), Positives = 59/133 (44%), Gaps = 24/133 (18%)

Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LVF+Y+  +LH  I+       H  +  +Y ++  I Y H+  ++HRD+   N+L +   
Sbjct: 88  LVFDYMETDLHAVIRANILEPVH-KQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLN-AE 145

Query: 78  KTVKIAADSGMAKEIDAPFDAHT--------------------TEMVILR-YRAPKILFG 116
             VK+ AD G+++                              T+ V  R YRAP+IL G
Sbjct: 146 CHVKV-ADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLG 204

Query: 117 RTNCFAAIDMWAV 129
            T     IDMW++
Sbjct: 205 STKYTKGIDMWSL 217

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 76.8 bits (189), Expect = 9e-18
 Identities = 26/132 (19%), Positives = 56/132 (42%), Gaps = 18/132 (13%)

Query: 17  NLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
            +V E  NI+L+ ++++   +D    K +   +L  +   H   I+H DL   N L  I 
Sbjct: 132 YMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFL--IV 189

Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVI--LRYRAPKILFGRTNCF----------AAI 124
           +  +K+  D G+A ++     +   +  +  + Y  P+ +   ++               
Sbjct: 190 DGMLKL-IDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKS 248

Query: 125 DMWAV---LYLL 133
           D+W++   LY +
Sbjct: 249 DVWSLGCILYYM 260

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 75.9 bits (187), Expect = 2e-17
 Identities = 26/132 (19%), Positives = 56/132 (42%), Gaps = 18/132 (13%)

Query: 17  NLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
            +V E  NI+L+ ++++   +D    K +   +L  +   H   I+H DL   N L  I 
Sbjct: 85  YMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFL--IV 142

Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVI--LRYRAPKILFGRTNCF----------AAI 124
           +  +K+  D G+A ++     +   +  +  + Y  P+ +   ++               
Sbjct: 143 DGMLKL-IDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKS 201

Query: 125 DMWAV---LYLL 133
           D+W++   LY +
Sbjct: 202 DVWSLGCILYYM 213

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 75.0 bits (185), Expect = 3e-17
 Identities = 26/132 (19%), Positives = 56/132 (42%), Gaps = 18/132 (13%)

Query: 17  NLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
            +V E  NI+L+ ++++   +D    K +   +L  +   H   I+H DL   N L  I 
Sbjct: 104 YMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFL--IV 161

Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVI--LRYRAPKILFGRTNCF----------AAI 124
           +  +K+  D G+A ++     +   +  +  + Y  P+ +   ++               
Sbjct: 162 DGMLKL-IDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKS 220

Query: 125 DMWAV---LYLL 133
           D+W++   LY +
Sbjct: 221 DVWSLGCILYYM 232

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 69.3 bits (170), Expect = 4e-15
 Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 7/120 (5%)

Query: 18  LVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           +V E     +L +  ++   +     + +L  I+ G  Y H  ++IHRDL   NL  + E
Sbjct: 118 VVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN-E 176

Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWA---VLYLL 133
           +  VKI  D G+A +++   +          Y AP++L  + + F   D+W+   ++Y L
Sbjct: 177 DLEVKI-GDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEV-DVWSIGCIMYTL 234

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 68.4 bits (168), Expect = 6e-15
 Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 7/120 (5%)

Query: 18  LVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           +V E     +L +  ++   +     + +L  I+ G  Y H  ++IHRDL   NL  + E
Sbjct: 92  VVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN-E 150

Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWA---VLYLL 133
           +  VKI  D G+A +++   +          Y AP++L  + + F   D+W+   ++Y L
Sbjct: 151 DLEVKI-GDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEV-DVWSIGCIMYTL 208

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 66.6 bits (163), Expect = 3e-14
 Identities = 22/114 (19%), Positives = 47/114 (41%), Gaps = 6/114 (5%)

Query: 17  NLVFEYVNINLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
            L  E    +L +  + +   +    +  +L   L  +++ H++ ++H D+   N+    
Sbjct: 133 YLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLG- 191

Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
                K+  D G+  E+         E    RY AP++L G      A D++++
Sbjct: 192 PRGRCKL-GDFGLLVELGTAGAGEVQEGDP-RYMAPELLQGSYGT--AADVFSL 241

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 65.2 bits (159), Expect = 1e-13
 Identities = 37/148 (25%), Positives = 64/148 (43%), Gaps = 33/148 (22%)

Query: 18  LVFEYVNINLHKFIQQYHPMDSHL-------IKKFLYCILSGISYCHARKIIHRDLTTMN 70
           +  E  N+NL   ++  +  D +L           L  I SG+++ H+ KIIHRDL   N
Sbjct: 86  IALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQN 145

Query: 71  LL------------ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVIL----RYRAPKIL 114
           +L               EN  + I +D G+ K++D+   +  T +        +RAP++L
Sbjct: 146 ILVSTSSRFTADQQTGAENLRILI-SDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELL 204

Query: 115 FGRTNCFA------AIDMWA---VLYLL 133
               N         +ID+++   V Y +
Sbjct: 205 EESNNLQTKRRLTRSIDIFSMGCVFYYI 232

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 64.1 bits (157), Expect = 2e-13
 Identities = 36/121 (29%), Positives = 64/121 (52%), Gaps = 8/121 (6%)

Query: 18  LVFEYV-NINLHKFIQ-QYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           LV E   N  ++++++ +  P   +  + F++ I++G+ Y H+  I+HRDLT  NLL   
Sbjct: 88  LVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLT- 146

Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWA---VLYL 132
            N  +KI AD G+A ++  P + H T      Y +P+I     +   + D+W+   + Y 
Sbjct: 147 RNMNIKI-ADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLES-DVWSLGCMFYT 204

Query: 133 L 133
           L
Sbjct: 205 L 205

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 64.0 bits (156), Expect = 3e-13
 Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 8/113 (7%)

Query: 18  LVFEYVNINLHKFIQQ--YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMN-LLAD 74
           + FE +++NL++ I++  +      L++KF + IL  +   H  +IIH DL   N LL  
Sbjct: 176 MTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQ 235

Query: 75  IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMW 127
                +K+  D G +           T +    YRAP+++ G       IDMW
Sbjct: 236 QGRSGIKV-IDFGSSCYEH---QRVYTYIQSRFYRAPEVILG-ARYGMPIDMW 283

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 63.5 bits (155), Expect = 4e-13
 Identities = 40/126 (31%), Positives = 61/126 (48%), Gaps = 20/126 (15%)

Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           +V EY    L  +I +   M     ++F   I+  I YCH  KI+HRDL   NLL D +N
Sbjct: 86  MVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLD-DN 144

Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILR-------YRAPKILFGRTNCFAAIDMWA-- 128
             VKI AD G++           T+   L+       Y AP+++ G+      +D+W+  
Sbjct: 145 LNVKI-ADFGLS--------NIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCG 195

Query: 129 -VLYLL 133
            VLY++
Sbjct: 196 IVLYVM 201

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 62.7 bits (153), Expect = 7e-13
 Identities = 36/127 (28%), Positives = 55/127 (43%), Gaps = 19/127 (14%)

Query: 18  LVFEYV------NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNL 71
           +VFE V       +   K      P+     + +   ++ GI Y H +KIIHRD+   NL
Sbjct: 115 MVFELVNQGPVMEVPTLK------PLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNL 168

Query: 72  LADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCF--AAIDMWA- 128
           L   E+  +KI AD G++ E        +  +    + AP+ L      F   A+D+WA 
Sbjct: 169 LVG-EDGHIKI-ADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAM 226

Query: 129 --VLYLL 133
              LY  
Sbjct: 227 GVTLYCF 233

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 62.8 bits (153), Expect = 8e-13
 Identities = 19/86 (22%), Positives = 35/86 (40%), Gaps = 2/86 (2%)

Query: 17  NLVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           N+  E +   +L + I+Q   +       +L   L G+ Y H R+I+H D+   N+L   
Sbjct: 126 NIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSS 185

Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTT 101
           +     +  D G A  +       + 
Sbjct: 186 DGSRAAL-CDFGHALCLQPDGLGKSL 210

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 62.4 bits (152), Expect = 8e-13
 Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 4/83 (4%)

Query: 17  NLVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARK--IIHRDLTTMNLLA 73
            LV E + +  L  +++++  M   +++ +   IL G+ + H R   IIHRDL   N+  
Sbjct: 105 VLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFI 164

Query: 74  DIENKTVKIAADSGMAKEIDAPF 96
                +VKI  D G+A    A F
Sbjct: 165 TGPTGSVKI-GDLGLATLKRASF 186

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 62.3 bits (152), Expect = 1e-12
 Identities = 33/133 (24%), Positives = 52/133 (39%), Gaps = 21/133 (15%)

Query: 18  LVFEYVNIN--LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           +  EY            +          +    IL  +SY H++ IIHRDL  MN+  D 
Sbjct: 92  IQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFID- 150

Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILR--------------YRAPKILFGRTNCF 121
           E++ VKI  D G+AK +    D    +   L               Y A ++L G  +  
Sbjct: 151 ESRNVKI-GDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYN 209

Query: 122 AAIDMWA---VLY 131
             IDM++   + +
Sbjct: 210 EKIDMYSLGIIFF 222

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 62.0 bits (151), Expect = 1e-12
 Identities = 25/122 (20%), Positives = 51/122 (41%), Gaps = 10/122 (8%)

Query: 18  LVFEYVNIN--LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           L+ E       L  FI +   +   L + F + +L  + +CH   ++HRD+   N+L D+
Sbjct: 125 LILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL 184

Query: 76  ENKTVKIAADSGMAKEI-DAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWA---VLY 131
               +K+  D G    + D  +     +   + Y  P+ +        +  +W+   +LY
Sbjct: 185 NRGELKL-IDFGSGALLKDTVY--TDFDGTRV-YSPPEWIRYHRYHGRSAAVWSLGILLY 240

Query: 132 LL 133
            +
Sbjct: 241 DM 242

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 62.1 bits (151), Expect = 2e-12
 Identities = 27/129 (20%), Positives = 52/129 (40%), Gaps = 14/129 (10%)

Query: 18  LVFEYVNINLHKFIQQYHPMDSHL-IKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           +  E     L ++++Q       L     L    SG+++ H+  I+HRDL   N+L  + 
Sbjct: 95  IAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMP 154

Query: 77  NKT----VKIAADSGMAKEIDAP---FDAHTTEMVILRYRAPKILFGRTNCFA--AIDMW 127
           N        I +D G+ K++      F   +       + AP++L           +D++
Sbjct: 155 NAHGKIKAMI-SDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIF 213

Query: 128 A---VLYLL 133
           +   V Y +
Sbjct: 214 SAGCVFYYV 222

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 61.6 bits (150), Expect = 2e-12
 Identities = 21/104 (20%), Positives = 44/104 (42%), Gaps = 10/104 (9%)

Query: 18  LVFEYV-NINLHKFIQ-QYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           ++        L+  ++     +D +  ++    I+ G+ Y HA+ I+H+DL + N+    
Sbjct: 106 IITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVF--Y 163

Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVI-----LRYRAPKIL 114
           +N  V I  D G+             + +      L + AP+I+
Sbjct: 164 DNGKVVI-TDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEII 206

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 61.2 bits (149), Expect = 2e-12
 Identities = 30/118 (25%), Positives = 52/118 (44%), Gaps = 6/118 (5%)

Query: 17  NLVFEYV-NINLHKFIQQYH---PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLL 72
            +  E V   +L   ++        +   I  +   IL G+ Y H  +I+HRD+   N+L
Sbjct: 95  KIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVL 154

Query: 73  ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPK-ILFGRTNCFAAIDMWAV 129
            +  +  +KI +D G +K +        T    L+Y AP+ I  G      A D+W++
Sbjct: 155 INTYSGVLKI-SDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSL 211

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 60.8 bits (148), Expect = 4e-12
 Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 13/123 (10%)

Query: 18  LVFEYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           L+ EY +   +  ++  +  M     +     I+S + YCH ++I+HRDL   NLL D  
Sbjct: 91  LIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLD-A 149

Query: 77  NKTVKIAADSGMAKEIDAPFDAHT---TEMVILRYRAPKILFGRTNCFAAIDMWA---VL 130
           +  +KI AD G + E                   Y AP++  G+      +D+W+   +L
Sbjct: 150 DMNIKI-ADFGFSNEFTVGGKLDAFCGA----PPYAAPELFQGKKYDGPEVDVWSLGVIL 204

Query: 131 YLL 133
           Y L
Sbjct: 205 YTL 207

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 60.9 bits (148), Expect = 4e-12
 Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 6/110 (5%)

Query: 27  LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADS 86
           L  FI ++  +D  L       ++S + Y   + IIHRD+   N++   E+ T+K+  D 
Sbjct: 117 LFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIA-EDFTIKL-IDF 174

Query: 87  GMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWA---VLYLL 133
           G A  ++     +T    I  Y AP++L G       ++MW+    LY L
Sbjct: 175 GSAAYLERGKLFYTFCGTIE-YCAPEVLMGNPYRGPELEMWSLGVTLYTL 223

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 60.9 bits (148), Expect = 4e-12
 Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 21/129 (16%)

Query: 18  LVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHAR--------KIIHRDLTT 68
           L+ +Y  N +L+ +++    +D+  + K  Y  +SG+ + H           I HRDL +
Sbjct: 112 LITDYHENGSLYDYLKS-TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKS 170

Query: 69  MNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVI----LRYRAPKILFGRTNC---- 120
            N+L   +N T  I AD G+A +  +  +             RY  P++L    N     
Sbjct: 171 KNILVK-KNGTCCI-ADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQ 228

Query: 121 -FAAIDMWA 128
            +   DM++
Sbjct: 229 SYIMADMYS 237

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 60.8 bits (148), Expect = 4e-12
 Identities = 28/135 (20%), Positives = 51/135 (37%), Gaps = 21/135 (15%)

Query: 18  LVFEYV-NINLHKFIQQYHPMDSHL----IKKFLYCILSGISYCHARKIIHRDLTTMNLL 72
           L+  +     L   I++     + L    I   L  I  G+   HA+   HRDL   N+L
Sbjct: 107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNIL 166

Query: 73  ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVI---------LRYRAPKILFGRTNCFA- 122
              +     +  D G   +     +     + +         + YRAP++   +++C   
Sbjct: 167 LG-DEGQPVL-MDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVID 224

Query: 123 -AIDMWA---VLYLL 133
              D+W+   VLY +
Sbjct: 225 ERTDVWSLGCVLYAM 239

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 60.8 bits (148), Expect = 4e-12
 Identities = 27/122 (22%), Positives = 53/122 (43%), Gaps = 10/122 (8%)

Query: 18  LVFEYVN--INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           LV E      +L  +I +  P+     + F   +++ I +CH+R ++HRD+   N+L D+
Sbjct: 115 LVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDL 174

Query: 76  ENKTVKIAADSGMAKEI-DAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWA---VLY 131
                K+  D G    + D P+     +   + Y  P+ +           +W+   +LY
Sbjct: 175 RRGCAKL-IDFGSGALLHDEPY--TDFDGTRV-YSPPEWISRHQYHALPATVWSLGILLY 230

Query: 132 LL 133
            +
Sbjct: 231 DM 232

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 60.9 bits (148), Expect = 4e-12
 Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 9/121 (7%)

Query: 17  NLVFEYV-NINLHKFIQQY--HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLA 73
            +V +Y    +L K I            I  +   I   + + H RKI+HRD+ + N+  
Sbjct: 99  YIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFL 158

Query: 74  DIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWA---VL 130
             ++ TV++  D G+A+ +++  +     +    Y +P+I   +     + D+WA   VL
Sbjct: 159 T-KDGTVQL-GDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKS-DIWALGCVL 215

Query: 131 Y 131
           Y
Sbjct: 216 Y 216

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 60.8 bits (147), Expect = 5e-12
 Identities = 15/127 (11%), Positives = 38/127 (29%), Gaps = 16/127 (12%)

Query: 18  LVFEYVNINLHKFIQQYH-------PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMN 70
           L+    +++L                     +      ++   +   ++ ++H   T  N
Sbjct: 165 LLMPAASVDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDN 224

Query: 71  LLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCF-AAIDMWA- 128
           L     +  + +  D     ++           V + Y   + L   T  F  A++ W  
Sbjct: 225 LFIM-PDGRLML-GDVSALWKVGTRG---PASSVPVTYAPREFLNASTATFTHALNAWQL 279

Query: 129 --VLYLL 133
              +Y +
Sbjct: 280 GLSIYRV 286

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 59.9 bits (146), Expect = 5e-12
 Identities = 31/114 (27%), Positives = 57/114 (50%), Gaps = 8/114 (7%)

Query: 18  LVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           L+ EY     +++ +Q+    D      ++  + + +SYCH++++IHRD+   NLL    
Sbjct: 86  LILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG-S 144

Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRT-NCFAAIDMWAV 129
              +KI AD G +    AP    T     L Y  P+++ GR  +    +D+W++
Sbjct: 145 AGELKI-ADFGWSVH--APSSRRTDLCGTLDYLPPEMIEGRMHD--EKVDLWSL 193

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 60.2 bits (146), Expect = 6e-12
 Identities = 23/136 (16%), Positives = 51/136 (37%), Gaps = 25/136 (18%)

Query: 18  LVFEYVNI-NLHKFIQQ---YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLA 73
           L+ E+    +L+  +++    + +        L  ++ G+++     I+HR++   N++ 
Sbjct: 86  LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMR 145

Query: 74  DI---ENKTVKIAADSGMAKEIDAPFDAHT---TEMVILRYRAPKILFGRTNCF------ 121
            I        K+  D G A+E++      +   TE     Y  P +              
Sbjct: 146 VIGEDGQSVYKL-TDFGAARELEDDEQFVSLYGTEE----YLHPDMYERAVLRKDHQKKY 200

Query: 122 -AAIDMWA---VLYLL 133
            A +D+W+     Y  
Sbjct: 201 GATVDLWSIGVTFYHA 216

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 60.0 bits (146), Expect = 7e-12
 Identities = 27/103 (26%), Positives = 52/103 (50%), Gaps = 8/103 (7%)

Query: 18  LVFEYV-NINLHKFIQQ---YHPMDSHLIKKFLYCILSGISYCHARK--IIHRDLTTMNL 71
           +V EY+   +L++ + +      +D        Y +  G++Y H R   I+HR+L + NL
Sbjct: 111 IVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNL 170

Query: 72  LADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKIL 114
           L D +  TVK+  D G+++   + F +  +      + AP++L
Sbjct: 171 LVD-KKYTVKV-CDFGLSRLKASTFLSSKSAAGTPEWMAPEVL 211

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 60.2 bits (146), Expect = 7e-12
 Identities = 23/136 (16%), Positives = 52/136 (38%), Gaps = 25/136 (18%)

Query: 18  LVFEYVNI-NLHKFIQQ---YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLA 73
           L+ E+    +L+  +++    + +        L  ++ G+++     I+HR++   N++ 
Sbjct: 86  LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMR 145

Query: 74  DI---ENKTVKIAADSGMAKEIDAPFDAHT---TEMVILRYRAPKILFGRTNCF------ 121
            I        K+  D G A+E++      +   TE     Y  P +              
Sbjct: 146 VIGEDGQSVYKL-TDFGAARELEDDEQFVSLYGTEE----YLHPDMYERAVLRKDHQKKY 200

Query: 122 -AAIDMWAV---LYLL 133
            A +D+W++    Y  
Sbjct: 201 GATVDLWSIGVTFYHA 216

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 59.6 bits (145), Expect = 9e-12
 Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 6/101 (5%)

Query: 18  LVFEYV-NINLHKFIQ-QYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           +V ++    +L+  +       +   +         G+ Y HA+ IIHRDL + N+    
Sbjct: 96  IVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLH- 154

Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVI--LRYRAPKIL 114
           E+ TVKI  D G+A E      +H  E +   + + AP+++
Sbjct: 155 EDNTVKI-GDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 194

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 59.5 bits (145), Expect = 1e-11
 Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 21/127 (16%)

Query: 18  LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           +V EYV+   L  +I ++  ++    ++    ILS + YCH   ++HRDL   N+L D  
Sbjct: 88  MVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLD-A 146

Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILR-------YRAPKILFGRTNCFAAIDMWA- 128
           +   KI AD G++           ++   LR       Y AP+++ GR      +D+W+ 
Sbjct: 147 HMNAKI-ADFGLS--------NMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSC 197

Query: 129 --VLYLL 133
             +LY L
Sbjct: 198 GVILYAL 204

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 59.3 bits (144), Expect = 1e-11
 Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 10/117 (8%)

Query: 18  LVFEYVNINLHKFIQQ--YHPMDSHLIKKFLYCILSGISYCHARK--IIHRDLTTMN-LL 72
           LVFE ++ NL+  ++   +  +  +L +KF   + + + +    +  IIH DL   N LL
Sbjct: 133 LVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILL 192

Query: 73  ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            + +   +KI  D G + ++          +    YR+P++L G      AIDMW++
Sbjct: 193 CNPKRSAIKI-VDFGSSCQLG---QRIYQYIQSRFYRSPEVLLGMPYDL-AIDMWSL 244

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 58.8 bits (143), Expect = 1e-11
 Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 4/77 (5%)

Query: 27  LHKFIQQYH--PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAA 84
           L ++I++     +D  L  +    I  G+ Y H++K+I+RDL   N+    + K VKI  
Sbjct: 107 LEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLV-DTKQVKI-G 164

Query: 85  DSGMAKEIDAPFDAHTT 101
           D G+   +        +
Sbjct: 165 DFGLVTSLKNDGKRTRS 181

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 58.9 bits (143), Expect = 2e-11
 Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 13/120 (10%)

Query: 18  LVFEYVNINLHKFIQQ--YHPMDSHLIKKFLYCILSGISYCHAR-KIIHRDLTTMNLLAD 74
           +VFE +  NL   I++  +  +    +K+    +L G+ Y H R  IIH D+   N+L +
Sbjct: 107 MVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLME 166

Query: 75  IENK-----TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           I +       +KI AD G A   D   + +T  +    YR+P++L G        D+W+ 
Sbjct: 167 IVDSPENLIQIKI-ADLGNACWYD---EHYTNSIQTREYRSPEVLLG-APWGCGADIWST 221

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 59.3 bits (144), Expect = 2e-11
 Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 9/98 (9%)

Query: 43  KKFLYCILSGISYCHARKIIHRDLTTMNLLADI--ENKTVKIAADSGMAKEIDAPFDAHT 100
           K + Y +L  + Y H   IIHRDL   N+L     E+  +KI  D G +K +        
Sbjct: 242 KLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKI-TDFGHSKILG-ETSLMR 299

Query: 101 TEMVILRYRAPKILFG--RTNCFAAIDMWA---VLYLL 133
           T      Y AP++L          A+D W+   +L++ 
Sbjct: 300 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 337

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 58.9 bits (143), Expect = 2e-11
 Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 4/79 (5%)

Query: 17  NLVFEYV-NINLHKFIQ-QYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
           N + EY+    L   I+             F   I SG++Y H+  IIHRDL + N L  
Sbjct: 83  NFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVR 142

Query: 75  IENKTVKIAADSGMAKEID 93
            ENK V + AD G+A+ + 
Sbjct: 143 -ENKNVVV-ADFGLARLMV 159

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 58.5 bits (142), Expect = 2e-11
 Identities = 19/90 (21%), Positives = 41/90 (45%), Gaps = 8/90 (8%)

Query: 17  NLVFEYV-NINLHKFIQQY----HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNL 71
           N+V E     +L + I+ +      +    + K+   + S + + H+R+++HRD+   N+
Sbjct: 108 NIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANV 167

Query: 72  LADIENKTVKIAADSGMAKEIDAPFD-AHT 100
                   VK+  D G+ +   +    AH+
Sbjct: 168 FIT-ATGVVKL-GDLGLGRFFSSKTTAAHS 195

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 58.9 bits (142), Expect = 2e-11
 Identities = 34/128 (26%), Positives = 51/128 (39%), Gaps = 18/128 (14%)

Query: 18  LVFEYVNI-NLHKFIQQ---YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLL- 72
           L  EY    +L K++ Q      +    I+  L  I S + Y H  +IIHRDL   N++ 
Sbjct: 95  LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVL 154

Query: 73  -ADIENKTVKIAADSGMAKEIDAPFDAHT---TEMVILRYRAPKILFGRTNCFAAIDMW- 127
               +    KI  D G AKE+D          T      Y AP++L  +      +D W 
Sbjct: 155 QPGPQRLIHKI-IDLGYAKELDQGELCTEFVGTLQ----YLAPELLEQKKYT-VTVDYWS 208

Query: 128 --AVLYLL 133
              + +  
Sbjct: 209 FGTLAFEC 216

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 59.0 bits (143), Expect = 2e-11
 Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 21/127 (16%)

Query: 18  LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           +V EYV+   L  +I +   +D    ++    ILSG+ YCH   ++HRDL   N+L D  
Sbjct: 93  MVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLD-A 151

Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILR-------YRAPKILFGRTNCFAAIDMWA- 128
           +   KI AD G++           ++   LR       Y AP+++ GR      +D+W+ 
Sbjct: 152 HMNAKI-ADFGLS--------NMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSS 202

Query: 129 --VLYLL 133
             +LY L
Sbjct: 203 GVILYAL 209

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 58.7 bits (142), Expect = 2e-11
 Identities = 22/134 (16%), Positives = 50/134 (37%), Gaps = 22/134 (16%)

Query: 19  VFEYV-NINLHKFIQQ---YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
             +     NL  ++ +       +  +       I   + + H++ ++HRDL   N+   
Sbjct: 139 QMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFT 198

Query: 75  IENKTVKIAADSGMAKEIDAPFDAHTTEMVILR------------YRAPKILFGRTNCFA 122
             +  VK+  D G+   +D   +  T    +              Y +P+ + G  N   
Sbjct: 199 -MDDVVKV-GDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGN-NYSH 255

Query: 123 AIDMWA---VLYLL 133
            +D+++   +L+ L
Sbjct: 256 KVDIFSLGLILFEL 269

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 58.1 bits (141), Expect = 3e-11
 Identities = 30/129 (23%), Positives = 52/129 (40%), Gaps = 21/129 (16%)

Query: 18  LVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHAR--------KIIHRDLTT 68
           L+  Y    +L+ ++Q    +D+    + +  I SG+++ H           I HRDL +
Sbjct: 83  LITHYHEMGSLYDYLQL-TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKS 141

Query: 69  MNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVI----LRYRAPKILFGRTNC---- 120
            N+L   +N    I AD G+A       +             RY AP++L          
Sbjct: 142 KNILVK-KNGQCCI-ADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFD 199

Query: 121 -FAAIDMWA 128
            +  +D+WA
Sbjct: 200 SYKRVDIWA 208

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 57.6 bits (140), Expect = 4e-11
 Identities = 34/127 (26%), Positives = 55/127 (43%), Gaps = 18/127 (14%)

Query: 18  LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           L  EY +   L   I+    M     ++F + +++G+ Y H   I HRD+   NLL D E
Sbjct: 82  LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD-E 140

Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILR-------YRAPKILFGRTNCFAAIDMWA- 128
              +KI +D G+A         +     +L        Y AP++L  R      +D+W+ 
Sbjct: 141 RDNLKI-SDFGLATVFR-----YNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 194

Query: 129 --VLYLL 133
             VL  +
Sbjct: 195 GIVLTAM 201

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 57.8 bits (140), Expect = 4e-11
 Identities = 34/128 (26%), Positives = 56/128 (43%), Gaps = 20/128 (15%)

Query: 18  LVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHAR----------KIIHRDL 66
           L+  +    +L  F++  + +  + +      +  G++Y H             I HRD+
Sbjct: 99  LITAFHEKGSLSDFLKA-NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDI 157

Query: 67  TTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVI--LRYRAPKILFGRTN----C 120
            + N+L    N T  I AD G+A + +A   A  T   +   RY AP++L G  N     
Sbjct: 158 KSKNVLLK-NNLTACI-ADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDA 215

Query: 121 FAAIDMWA 128
           F  IDM+A
Sbjct: 216 FLRIDMYA 223

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 57.9 bits (140), Expect = 4e-11
 Identities = 33/129 (25%), Positives = 54/129 (41%), Gaps = 21/129 (16%)

Query: 18  LVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHAR--------KIIHRDLTT 68
           LV +Y  + +L  ++ + + +    + K      SG+++ H           I HRDL +
Sbjct: 117 LVSDYHEHGSLFDYLNR-YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKS 175

Query: 69  MNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVI----LRYRAPKILFGRTNC---- 120
            N+L   +N T  I AD G+A   D+  D             RY AP++L    N     
Sbjct: 176 KNILVK-KNGTCCI-ADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFE 233

Query: 121 -FAAIDMWA 128
            F   D++A
Sbjct: 234 SFKRADIYA 242

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 57.2 bits (139), Expect = 5e-11
 Identities = 20/118 (16%), Positives = 46/118 (38%), Gaps = 14/118 (11%)

Query: 18  LVFEYV-NINLHKFI--QQYHPMDSHLIKKFLYCILSGISYCHARK--IIHRDLTTMNLL 72
           L+  ++   +L+  +       +D     KF   +  G+++ H  +  I    L + +++
Sbjct: 86  LITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVM 145

Query: 73  ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGR--TNCFAAIDMWA 128
            D E+ T +I + + +              M    + AP+ L  +       + DMW+
Sbjct: 146 ID-EDMTARI-SMADVKFSFQ-----SPGRMYAPAWVAPEALQKKPEDTNRRSADMWS 196

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 57.7 bits (140), Expect = 5e-11
 Identities = 34/127 (26%), Positives = 55/127 (43%), Gaps = 18/127 (14%)

Query: 18  LVFEYVNIN-LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           L  EY +   L   I+    M     ++F + +++G+ Y H   I HRD+   NLL D E
Sbjct: 82  LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD-E 140

Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILR-------YRAPKILFGRTNCFAAIDMWA- 128
              +KI +D G+A         +     +L        Y AP++L  R      +D+W+ 
Sbjct: 141 RDNLKI-SDFGLATVFR-----YNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 194

Query: 129 --VLYLL 133
             VL  +
Sbjct: 195 GIVLTAM 201

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 57.5 bits (139), Expect = 5e-11
 Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 10/94 (10%)

Query: 49  ILSGISYCHARKIIHRDLTTMN-LLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVIL- 106
           I S + Y H + I HRD+   N L +  ++  +K+  D G++KE     +     M    
Sbjct: 177 IFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKL-VDFGLSKEFYKLNNGEYYGMTTKA 235

Query: 107 ---RYRAPKILFGRTNCF-AAIDMWA---VLYLL 133
               + AP++L      +    D W+   +L+LL
Sbjct: 236 GTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLL 269

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 57.2 bits (139), Expect = 6e-11
 Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 11/121 (9%)

Query: 18  LVFEYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           L+ E+     L+K +Q++   D      F+  +   + YCH RK+IHRD+   NLL    
Sbjct: 91  LMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMG-Y 149

Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRT-NCFAAIDMWA---VLYL 132
              +KI AD G +    AP     T    L Y  P+++ G+T +    +D+W    + Y 
Sbjct: 150 KGELKI-ADFGWSVH--APSLRRRTMCGTLDYLPPEMIEGKTHD--EKVDLWCAGVLCYE 204

Query: 133 L 133
            
Sbjct: 205 F 205

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 57.4 bits (139), Expect = 6e-11
 Identities = 20/124 (16%), Positives = 46/124 (37%), Gaps = 21/124 (16%)

Query: 26  NLHKFIQQ---YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKI 82
           NL  ++         +  +       I   + + H++ ++HRDL   N+     +  VK+
Sbjct: 101 NLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFT-MDDVVKV 159

Query: 83  AADSGMAKEIDAPFDAHTTEMVILR------------YRAPKILFGRTNCFAAIDMWA-- 128
             D G+   +D   +  T    +              Y +P+ + G +      D+++  
Sbjct: 160 -GDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKV-DIFSLG 217

Query: 129 -VLY 131
            +L+
Sbjct: 218 LILF 221

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 57.3 bits (139), Expect = 7e-11
 Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 13/100 (13%)

Query: 43  KKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTE 102
           +K +  +L  I   H   I+HRDL   N+L D ++  +K+  D G + ++D        E
Sbjct: 127 RKIMRALLEVICALHKLNIVHRDLKPENILLD-DDMNIKL-TDFGFSCQLDP--GEKLRE 182

Query: 103 MV-ILRYRAPKILFGRTNCFA-----AIDMWA---VLYLL 133
           +     Y AP+I+    N         +DMW+   ++Y L
Sbjct: 183 VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTL 222

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 56.9 bits (138), Expect = 9e-11
 Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 23/105 (21%)

Query: 43  KKFLYCILSGISYCHARKIIHRDLTTMNLL--ADIENKTVKIAADSGMAKEIDAPFDAHT 100
           K + Y +L  + Y H   IIHRDL   N+L  +  E+  +KI  D G +K +        
Sbjct: 117 KLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKI-TDFGHSKILG------- 168

Query: 101 TEMVILR-------YRAPKILFG--RTNCFAAIDMWA---VLYLL 133
            E  ++R       Y AP++L          A+D W+   +L++ 
Sbjct: 169 -ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 212

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 56.7 bits (137), Expect = 1e-10
 Identities = 26/121 (21%), Positives = 51/121 (42%), Gaps = 11/121 (9%)

Query: 19  VFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARK-IIHRDLTTMNLLADIEN 77
           + ++              +   +IK  +  +L+  SY H  K I HRD+   N+L D +N
Sbjct: 130 ILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMD-KN 188

Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMV-ILRYRAPKILFGRTNCF-AAIDMWA---VLYL 132
             VK+ +D G ++ +    D           +  P+     ++   A +D+W+    LY+
Sbjct: 189 GRVKL-SDFGESEYMV---DKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYV 244

Query: 133 L 133
           +
Sbjct: 245 M 245

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 57.0 bits (138), Expect = 1e-10
 Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 15/125 (12%)

Query: 18  LVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           ++ EY     L++ I           + F   +LSG+SYCH+ +I HRDL   N L D  
Sbjct: 93  IIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLD-G 151

Query: 77  NKT--VKIAADSGMAKEIDAPFDAHT---TEMVILRYRAPKILFGRTNCFAAIDMWA--- 128
           +    +KI  D G +K         +   T      Y AP++L  +       D+W+   
Sbjct: 152 SPAPRLKI-CDFGYSKSSVLHSQPKSTVGT----PAYIAPEVLLRQEYDGKIADVWSCGV 206

Query: 129 VLYLL 133
            LY++
Sbjct: 207 TLYVM 211

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 56.6 bits (137), Expect = 1e-10
 Identities = 27/107 (25%), Positives = 42/107 (39%), Gaps = 11/107 (10%)

Query: 18  LVFEYV-NINLHKFIQQYHP---MDSHLIKKFLYCILSGISYCHARK---IIHRDLTTMN 70
           LV EY    +L+  +    P     +     +      G++Y H+ +   +IHRDL   N
Sbjct: 76  LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPN 135

Query: 71  LLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGR 117
           LL       +KI  D G A +I       T       + AP++  G 
Sbjct: 136 LLLVAGGTVLKI-CDFGTACDIQTHM---TNNKGSAAWMAPEVFEGS 178

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 56.3 bits (136), Expect = 1e-10
 Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 25/106 (23%)

Query: 43  KKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTE 102
           +  +  +L  +S+ HA  I+HRDL   N+L D +N  +++ +D G +  ++         
Sbjct: 203 RSIMRSLLEAVSFLHANNIVHRDLKPENILLD-DNMQIRL-SDFGFSCHLE--------P 252

Query: 103 MVILR-------YRAPKILFGRTNCFA-----AIDMWA---VLYLL 133
              LR       Y AP+IL    +         +D+WA   +L+ L
Sbjct: 253 GEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTL 298

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 55.7 bits (135), Expect = 2e-10
 Identities = 26/130 (20%), Positives = 51/130 (39%), Gaps = 22/130 (16%)

Query: 18  LVFEYVN---INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
           +V EY       +   + +           +   ++ G+ Y H++ I+H+D+   NLL  
Sbjct: 85  MVMEYCVCGMQEMLDSVPE-KRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLT 143

Query: 75  IENKTVKIAADSGMAKEIDAPFDAHTTEMVILR-------YRAPKILFGRTN-CFAAIDM 126
               T+KI +  G+A+ +       T      R       ++ P+I  G        +D+
Sbjct: 144 -TGGTLKI-SALGVAEALHPFAADDT-----CRTSQGSPAFQPPEIANGLDTFSGFKVDI 196

Query: 127 WA---VLYLL 133
           W+    LY +
Sbjct: 197 WSAGVTLYNI 206

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 55.1 bits (133), Expect = 4e-10
 Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 7/89 (7%)

Query: 49  ILSGISYCHARKIIHRDLTTMNLL-ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILR 107
           I  GI + H   I+H DL   N+L  + + K +KI  D G+A+    P +          
Sbjct: 196 ICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKI-IDFGLARRYK-PREKLKVNFGTPE 253

Query: 108 YRAPKILFGRTNCFAAIDMWAV---LYLL 133
           + AP+++      F   DMW+V    Y+L
Sbjct: 254 FLAPEVVNYDFVSFPT-DMWSVGVIAYML 281

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 55.1 bits (133), Expect = 4e-10
 Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 7/89 (7%)

Query: 49  ILSGISYCHARKIIHRDLTTMNLL-ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILR 107
              G+ + H   I+H D+   N++    +  +VKI  D G+A +++ P +          
Sbjct: 158 ACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKI-IDFGLATKLN-PDEIVKVTTATAE 215

Query: 108 YRAPKILFGRTNCFAAIDMWAV---LYLL 133
           + AP+I+      F   DMWA+    Y+L
Sbjct: 216 FAAPEIVDREPVGFYT-DMWAIGVLGYVL 243

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 55.1 bits (132), Expect = 5e-10
 Identities = 15/115 (13%), Positives = 35/115 (30%), Gaps = 10/115 (8%)

Query: 27  LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADS 86
           L      +  +  H   +    ++  ++  H   ++H  L  ++++ D +   V +    
Sbjct: 198 LLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLD-QRGGVFL-TGF 255

Query: 87  GMAKEIDAPFDAHTTEMVI-LRYRAPKILFGR----TNCFAAIDMWA---VLYLL 133
                  A   +            A ++L       T    A D W     +Y +
Sbjct: 256 EHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWI 310

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 54.8 bits (132), Expect = 6e-10
 Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 7/89 (7%)

Query: 49  ILSGISYCHARKIIHRDLTTMNLL-ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILR 107
           +  G+ + H    +H DL   N++     +  +K+  D G+   +D P  +         
Sbjct: 264 VCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKL-IDFGLTAHLD-PKQSVKVTTGTAE 321

Query: 108 YRAPKILFGRTNCFAAIDMWAV---LYLL 133
           + AP++  G+   +   DMW+V    Y+L
Sbjct: 322 FAAPEVAEGKPVGYYT-DMWSVGVLSYIL 349

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 54.2 bits (131), Expect = 7e-10
 Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 7/89 (7%)

Query: 49  ILSGISYCHARKIIHRDLTTMNLL-ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILR 107
           +   + + H+  I H D+   N++     + T+KI  + G A+++  P D          
Sbjct: 111 VCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKI-IEFGQARQLK-PGDNFRLLFTAPE 168

Query: 108 YRAPKILFGRTNCFAAIDMWAV---LYLL 133
           Y AP++        A  DMW++   +Y+L
Sbjct: 169 YYAPEVHQHDVVSTAT-DMWSLGTLVYVL 196

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 54.2 bits (131), Expect = 7e-10
 Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 4/90 (4%)

Query: 18  LVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           +V EYV+ + L   +    PM      + +      +++ H   IIHRD+   N++    
Sbjct: 93  IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS-A 151

Query: 77  NKTVKIAADSGMAKEIDAPFDAHT-TEMVI 105
              VK+  D G+A+ I    ++ T T  VI
Sbjct: 152 TNAVKV-MDFGIARAIADSGNSVTQTAAVI 180

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 54.1 bits (131), Expect = 8e-10
 Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 9/91 (9%)

Query: 49  ILSGISYCHARKIIHRDLTTMNLL---ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVI 105
           IL G+ Y H+++I H DL   N++    ++ N  +K+  D G+A +I+   +        
Sbjct: 117 ILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKL-IDFGIAHKIE-AGNEFKNIFGT 174

Query: 106 LRYRAPKILFGRTNCFAAIDMWAV---LYLL 133
             + AP+I+        A DMW++    Y+L
Sbjct: 175 PEFVAPEIVNYEPLGLEA-DMWSIGVITYIL 204

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 54.3 bits (131), Expect = 8e-10
 Identities = 26/126 (20%), Positives = 49/126 (38%), Gaps = 17/126 (13%)

Query: 18  LVFEYVNINLHKFIQQ--YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMN-LLAD 74
           + FE +  N  +F+++  + P     ++   Y +   + + H  ++ H DL   N L  +
Sbjct: 99  IAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVN 158

Query: 75  IENKTVKIAADSGMAKE--------ID---APFDAHTTEMVIL-R-YRAPKILFGRTNCF 121
            E +T+     S   K          D   A FD      ++  R YR P+++       
Sbjct: 159 SEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQ 218

Query: 122 AAIDMW 127
              D+W
Sbjct: 219 -PCDVW 223

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 54.3 bits (131), Expect = 8e-10
 Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 9/90 (10%)

Query: 49  ILSGISYCHARKIIHRDLTTMNLL--ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVIL 106
           +LSG++Y H   I+HRDL   NLL  +  ++  +KI  D G++   +         +   
Sbjct: 145 VLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKI-VDFGLSAVFE-NQKKMKERLGTA 202

Query: 107 RYRAPKILFGRTNCFAAIDMWAV---LYLL 133
            Y AP++L  + +     D+W++   L++L
Sbjct: 203 YYIAPEVLRKKYD--EKCDVWSIGVILFIL 230

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 53.9 bits (130), Expect = 9e-10
 Identities = 23/115 (20%), Positives = 50/115 (43%), Gaps = 16/115 (13%)

Query: 17  NLVFEYV-NINLHKFIQ-QYHPMDSHLIKKFLYCILSGISYCHARK--IIHRDLTTMNLL 72
            +V E+V   +L+  +  + HP+   +  + +  I  GI Y   +   I+HRDL + N+ 
Sbjct: 97  RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIF 156

Query: 73  AD----IENKTVKIAADSGMAKEIDAPFDAHTTEMVI--LRYRAPKILFGRTNCF 121
                       K+ AD G++++       H+   ++   ++ AP+ +      +
Sbjct: 157 LQSLDENAPVCAKV-ADFGLSQQ-----SVHSVSGLLGNFQWMAPETIGAEEESY 205

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 53.5 bits (129), Expect = 1e-09
 Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 9/91 (9%)

Query: 49  ILSGISYCHARKIIHRDLTTMNLL---ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVI 105
           IL G++Y H +KI H DL   N++    +I    +K+  D G+A EI+            
Sbjct: 124 ILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKL-IDFGLAHEIE-DGVEFKNIFGT 181

Query: 106 LRYRAPKILFGRTNCFAAIDMWAV---LYLL 133
             + AP+I+        A DMW++    Y+L
Sbjct: 182 PEFVAPEIVNYEPLGLEA-DMWSIGVITYIL 211

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 53.9 bits (130), Expect = 1e-09
 Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 9/90 (10%)

Query: 49  ILSGISYCHARKIIHRDLTTMNLLADI--ENKTVKIAADSGMAKEIDAPFDAHTTEMVIL 106
           +LSGI+Y H  KI+HRDL   NLL +   ++  ++I  D G++   +        ++   
Sbjct: 135 VLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRI-IDFGLSTHFE-ASKKMKDKIGTA 192

Query: 107 RYRAPKILFGRTNCFAAIDMWAV---LYLL 133
            Y AP++L G  +     D+W+    LY+L
Sbjct: 193 YYIAPEVLHGTYD--EKCDVWSTGVILYIL 220

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 53.6 bits (129), Expect = 1e-09
 Identities = 40/138 (28%), Positives = 58/138 (42%), Gaps = 24/138 (17%)

Query: 18  LVFEYVNINLHKFIQQY---HPMDSHLIKKFLYCILSGISYCHARK--IIHRDLTTMNLL 72
           L+ E     L +F+++     P+    + K  Y     + + H +K  IIHRDL   NLL
Sbjct: 111 LLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLL 170

Query: 73  ADIENKTVKIAADSGMAKEIDAPFDAHTT-------EMVILR-----YRAPKILFGRTNC 120
                 T+K+  D G A  I    D   +       E  I R     YR P+I+   +N 
Sbjct: 171 LS-NQGTIKL-CDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNF 228

Query: 121 FA--AIDMWA---VLYLL 133
                 D+WA   +LYLL
Sbjct: 229 PIGEKQDIWALGCILYLL 246

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 53.0 bits (128), Expect = 2e-09
 Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 18  LVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           LV EY+    L ++I+ + P+       F   IL GI + H  +I+HRD+   N+L D  
Sbjct: 88  LVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILID-S 146

Query: 77  NKTVKIAADSGMAKEIDA 94
           NKT+KI  D G+AK +  
Sbjct: 147 NKTLKI-FDFGIAKALSE 163

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 52.6 bits (127), Expect = 3e-09
 Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 9/96 (9%)

Query: 44  KFLYCILSGISYCHARKIIHRDLTTMNLL---ADIENKTVKIAADSGMAKEIDAPFDAHT 100
            F+  IL G++Y H +KI H DL   N++    +I    +K+  D G+A EI+       
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKL-IDFGLAHEIE-DGVEFK 176

Query: 101 TEMVILRYRAPKILFGRTNCFAAIDMWAV---LYLL 133
                  + AP+I+        A DMW++    Y+L
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEA-DMWSIGVITYIL 211

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 52.6 bits (127), Expect = 3e-09
 Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 9/91 (9%)

Query: 49  ILSGISYCHARKIIHRDLTTMNLL---ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVI 105
           IL+G+ Y H+ +I H DL   N++    ++    +KI  D G+A +ID   +        
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKI-IDFGLAHKID-FGNEFKNIFGT 180

Query: 106 LRYRAPKILFGRTNCFAAIDMWAV---LYLL 133
             + AP+I+        A DMW++    Y+L
Sbjct: 181 PEFVAPEIVNYEPLGLEA-DMWSIGVITYIL 210

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 52.7 bits (126), Expect = 3e-09
 Identities = 17/116 (14%), Positives = 38/116 (32%), Gaps = 11/116 (9%)

Query: 27  LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADS 86
           L      +  +  H   +    ++  ++  H   ++H  L  ++++ D +   V +    
Sbjct: 193 LLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLD-QRGGVFL-TGF 250

Query: 87  GMAKEIDAPFDAHTT------EMVILRYRAPKILFGRTNCFAAIDMWA---VLYLL 133
                  A   +  +      E+   R         RT    + D WA   V+Y +
Sbjct: 251 EHLVRDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWI 306

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 52.3 bits (126), Expect = 3e-09
 Identities = 23/100 (23%), Positives = 43/100 (43%), Gaps = 11/100 (11%)

Query: 39  SHLIKKFLYCILSGISYCHARKIIHRDLTTMNLL--ADIENKTVKIAADSGMAKEIDAPF 96
           SH +++    IL  + YCH   IIHRD+    +L  +   +  VK+    G+A ++    
Sbjct: 133 SHYMRQ----ILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKL-GGFGVAIQLGESG 187

Query: 97  DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV---LYLL 133
                 +    + AP+++          D+W     L++L
Sbjct: 188 LVAGGRVGTPHFMAPEVVKREPYGKPV-DVWGCGVILFIL 226

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 52.2 bits (126), Expect = 4e-09
 Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 15/101 (14%)

Query: 39  SHLIKKFLYCILSGISYCHARKIIHRDLTTMNLL--ADIENKTVKIAADSGMAKEIDAPF 96
           S +I++    +LS + Y H   I+HRDL   NLL     EN  + I  D G++K      
Sbjct: 109 SLVIQQ----VLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMI-TDFGLSKMEQ--- 160

Query: 97  DAHTTEMV-ILRYRAPKILFGRTNCFAAIDMWA---VLYLL 133
           +   +       Y AP++L  +     A+D W+   + Y+L
Sbjct: 161 NGIMSTACGTPGYVAPEVL-AQKPYSKAVDCWSIGVITYIL 200

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 51.9 bits (125), Expect = 4e-09
 Identities = 27/128 (21%), Positives = 54/128 (42%), Gaps = 16/128 (12%)

Query: 17  NLVFEYV-NINLHKFIQQYHPMDSHL----IKKFLYCILSGISYCHARK-----IIHRDL 66
            +V EY    +L   I +      +L    + + +  +   +  CH R      ++HRDL
Sbjct: 83  YIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDL 142

Query: 67  TTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDM 126
              N+  D   + VK+  D G+A+ ++       T +    Y +P+ +   +    + D+
Sbjct: 143 KPANVFLD-GKQNVKL-GDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKS-DI 199

Query: 127 WA---VLY 131
           W+   +LY
Sbjct: 200 WSLGCLLY 207

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 51.9 bits (125), Expect = 5e-09
 Identities = 25/111 (22%), Positives = 44/111 (39%), Gaps = 21/111 (18%)

Query: 39  SHLIKKFLYCILSGISYCHARKIIHRDLTTMNLL--ADIENKTVKIAADSGMAKEIDAPF 96
           S +++     + S + + H + I HRDL   N+L     +   VKI  D  +   I    
Sbjct: 114 SVVVQD----VASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKI-CDFDLGSGIKLNG 168

Query: 97  DAHTTEMVILR-------YRAPKILFGRTNCFA----AIDMWA---VLYLL 133
           D        L        Y AP+++   +   +      D+W+   +LY+L
Sbjct: 169 DCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYIL 219

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 51.9 bits (125), Expect = 6e-09
 Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 11/100 (11%)

Query: 39  SHLIKKFLYCILSGISYCHARKIIHRDLTTMNLL--ADIENKTVKIAADSGMAKEIDAPF 96
           SH I++    IL  + +CH   ++HR+L   NLL  + ++   VK+ AD G+A E++   
Sbjct: 113 SHCIQQ----ILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKL-ADFGLAIEVEGEQ 167

Query: 97  DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV---LYLL 133
            A         Y +P++L  +      +D+WA    LY+L
Sbjct: 168 QAWFGFAGTPGYLSPEVL-RKDPYGKPVDLWACGVILYIL 206

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 51.8 bits (124), Expect = 7e-09
 Identities = 31/120 (25%), Positives = 49/120 (40%), Gaps = 21/120 (17%)

Query: 18  LVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHA---------RKIIHRDLT 67
           LV EY  N +L K++   H  D     +  + +  G++Y H            I HRDL 
Sbjct: 89  LVMEYYPNGSLXKYLSL-HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLN 147

Query: 68  TMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVI--------LRYRAPKILFGRTN 119
           + N+L    + T  I +D G++  +         E           +RY AP++L G  N
Sbjct: 148 SRNVLVK-NDGTCVI-SDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVN 205

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 51.6 bits (124), Expect = 8e-09
 Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 10/96 (10%)

Query: 44  KFLYCILSGISYCHARKIIHRDLTTMNLL--ADIENKTVKIAADSGMAKEIDAPFDAHTT 101
             +  IL  ++Y H   I+HRDL   NLL      +  +KI AD G++K ++        
Sbjct: 152 DAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKI-ADFGLSKIVEH--QVLMK 208

Query: 102 EMV-ILRYRAPKILFGRTNCFAAIDMWAV---LYLL 133
            +     Y AP+IL         +DMW+V    Y+L
Sbjct: 209 TVCGTPGYCAPEIL-RGCAYGPEVDMWSVGIITYIL 243

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 51.1 bits (122), Expect = 9e-09
 Identities = 26/138 (18%), Positives = 49/138 (35%), Gaps = 25/138 (18%)

Query: 18  LVFEYVN-------INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMN 70
           LV E  +       INL+K   +   M   L+  F   +L  I   H  +IIH D+   N
Sbjct: 144 LVGELYSYGTLLNAINLYKNTPE-KVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDN 202

Query: 71  LL----------ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVI--LRYRAPKILFGRT 118
            +           D  +  + +  D G + ++                 ++  ++L  + 
Sbjct: 203 FILGNGFLEQDDEDDLSAGLAL-IDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKP 261

Query: 119 NCFAAIDMW---AVLYLL 133
             +  ID +   A +Y +
Sbjct: 262 WNY-QIDYFGVAATVYCM 278

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 51.1 bits (123), Expect = 9e-09
 Identities = 27/126 (21%), Positives = 51/126 (40%), Gaps = 17/126 (13%)

Query: 18  LVFEYVNINLHKFIQQ--YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMN-LLAD 74
           +VFE + ++ + FI++  + P     I+K  Y I   +++ H+ K+ H DL   N L   
Sbjct: 94  IVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQ 153

Query: 75  IENKTVKIAADSGMAKE--------ID---APFDAHTTEMVIL-R-YRAPKILFGRTNCF 121
            +             +         +D   A +D      ++  R YRAP+++       
Sbjct: 154 SDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQ 213

Query: 122 AAIDMW 127
              D+W
Sbjct: 214 -PCDVW 218

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 51.2 bits (123), Expect = 9e-09
 Identities = 32/132 (24%), Positives = 51/132 (38%), Gaps = 23/132 (17%)

Query: 18  LVFEYVNINLHKFIQQ--YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMN-LLAD 74
           L+FE +  +L++ I +  Y+      IK +   IL  ++Y     + H DL   N LL D
Sbjct: 113 LIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDD 172

Query: 75  IENKTVKIAADSGMA--------------KEID---APFD--AHTTEMVILRYRAPKILF 115
              +   I                     K ID   A F    H + +   +YRAP+++ 
Sbjct: 173 PYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVIL 232

Query: 116 GRTNCFAAIDMW 127
                  + DMW
Sbjct: 233 NLGWDV-SSDMW 243

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 50.8 bits (122), Expect = 1e-08
 Identities = 27/142 (19%), Positives = 47/142 (33%), Gaps = 29/142 (20%)

Query: 11  WVHKRE-NLVFEYVNI-NLHKFIQQYHPMDSHL----IKKFLYCILSGISYCHARKIIHR 64
           W       +  EY N  +L   I + + + S+     +K  L  +  G+ Y H+  ++H 
Sbjct: 80  WAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHM 139

Query: 65  DLTTMNLL------------------ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVIL 106
           D+   N+                           KI  D G    I +P      E    
Sbjct: 140 DIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKI-GDLGHVTRISSP----QVEEGDS 194

Query: 107 RYRAPKILFGRTNCFAAIDMWA 128
           R+ A ++L          D++A
Sbjct: 195 RFLANEVLQENYTHLPKADIFA 216

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 50.8 bits (122), Expect = 1e-08
 Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 8/91 (8%)

Query: 49  ILSGISYCHARKIIHRDLTTMNLL---ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVI 105
           I   + Y HA+ ++HRDL   N+L        ++++I  D G AK++ A      T    
Sbjct: 125 ITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRI-CDFGFAKQLRAENGLLMTPCYT 183

Query: 106 LRYRAPKILFGRTNCFAAIDMWA---VLYLL 133
             + AP++L  R    AA D+W+   +LY +
Sbjct: 184 ANFVAPEVL-ERQGYDAACDIWSLGVLLYTM 213

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 50.7 bits (122), Expect = 1e-08
 Identities = 27/108 (25%), Positives = 48/108 (44%), Gaps = 15/108 (13%)

Query: 18  LVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARK---IIHRDLTTMNLL- 72
           LV E+     L++ +     +   ++  +   I  G++Y H      IIHRDL + N+L 
Sbjct: 83  LVMEFARGGPLNRVLSG-KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILI 141

Query: 73  ------ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKIL 114
                  D+ NK +KI  D G+A+E         +      + AP+++
Sbjct: 142 LQKVENGDLSNKILKI-TDFGLAREWHR--TTKMSAAGAYAWMAPEVI 186

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 50.8 bits (122), Expect = 1e-08
 Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 9/90 (10%)

Query: 49  ILSGISYCHARKIIHRDLTTMNLL--ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVIL 106
           + SGI+Y H   I+HRDL   N+L  +  ++  +KI  D G++             +   
Sbjct: 130 VFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKI-IDFGLSTCFQ-QNTKMKDRIGTA 187

Query: 107 RYRAPKILFGRTNCFAAIDMWAV---LYLL 133
            Y AP++L G  +     D+W+    LY+L
Sbjct: 188 YYIAPEVLRGTYD--EKCDVWSAGVILYIL 215

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 50.7 bits (122), Expect = 1e-08
 Identities = 30/97 (30%), Positives = 41/97 (42%), Gaps = 22/97 (22%)

Query: 49  ILSGISYCHARKIIHRDLTTMNLL--ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVIL 106
           IL G+ Y H   I+H DL   N+L  +      +KI  D GM+++I             L
Sbjct: 140 ILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKI-VDFGMSRKIG--------HACEL 190

Query: 107 R-------YRAPKILFGRTNCFAAIDMWAV---LYLL 133
           R       Y AP+IL       A  DMW +    Y+L
Sbjct: 191 REIMGTPEYLAPEILNYDPITTAT-DMWNIGIIAYML 226

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 50.4 bits (121), Expect = 1e-08
 Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 4/76 (5%)

Query: 18  LVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           LV EYV   +L  ++ ++    + L+  F   I  G++Y HA+  IHRDL   N+L D  
Sbjct: 112 LVMEYVPLGSLRDYLPRHSIGLAQLLL-FAQQICEGMAYLHAQHYIHRDLAARNVLLD-N 169

Query: 77  NKTVKIAADSGMAKEI 92
           ++ VKI  D G+AK +
Sbjct: 170 DRLVKI-GDFGLAKAV 184

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 50.3 bits (121), Expect = 2e-08
 Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 9/96 (9%)

Query: 43  KKFLYCILSGISYCHARKIIHRDLTTMNLL--ADIENKTVKIAADSGMAKEIDAPFDAHT 100
            + +  + SGI+Y H   I+HRDL   N+L  +  ++  +KI  D G++           
Sbjct: 124 ARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKI-IDFGLSTCFQ-QNTKMK 181

Query: 101 TEMVILRYRAPKILFGRTNCFAAIDMWA---VLYLL 133
             +    Y AP++L G  +     D+W+   +LY+L
Sbjct: 182 DRIGTAYYIAPEVLRGTYD--EKCDVWSAGVILYIL 215

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 50.5 bits (121), Expect = 2e-08
 Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 9/90 (10%)

Query: 49  ILSGISYCHARKIIHRDLTTMNLL--ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVIL 106
           ILSGI Y H   I+HRD+   N+L         +KI  D G++             +   
Sbjct: 155 ILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKI-VDFGLSSFFS-KDYKLRDRLGTA 212

Query: 107 RYRAPKILFGRTNCFAAIDMWAV---LYLL 133
            Y AP++L  + N     D+W+    +Y+L
Sbjct: 213 YYIAPEVLKKKYN--EKCDVWSCGVIMYIL 240

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 49.9 bits (120), Expect = 2e-08
 Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 9/96 (9%)

Query: 43  KKFLYCILSGISYCHARKIIHRDLTTMNLL--ADIENKTVKIAADSGMAKEIDAPFDAHT 100
            + +  +LS ++YCH   + HRDL   N L   D  +  +K+  D G+A     P     
Sbjct: 109 ARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKL-IDFGLAARFK-PGKMMR 166

Query: 101 TEMVILRYRAPKILFGRTNCFAAIDMWAV---LYLL 133
           T++    Y +P++L G        D W+    +Y+L
Sbjct: 167 TKVGTPYYVSPQVLEGLYG--PECDEWSAGVMMYVL 200

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 49.6 bits (119), Expect = 3e-08
 Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 4/79 (5%)

Query: 18  LVFEYV-NINLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           L+ E++ + +L +++ +  + ++     K+   I  G+ Y  +R+ +HRDL   N+L + 
Sbjct: 102 LIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVE- 160

Query: 76  ENKTVKIAADSGMAKEIDA 94
               VKI  D G+ K I+ 
Sbjct: 161 SEHQVKI-GDFGLTKAIET 178

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 49.2 bits (118), Expect = 4e-08
 Identities = 20/96 (20%), Positives = 43/96 (44%), Gaps = 9/96 (9%)

Query: 43  KKFLYCILSGISYCHARKIIHRDLTTMNLL--ADIENKTVKIAADSGMAKEIDAPFDAHT 100
            + +  +++ ++Y H++ ++H+DL   N+L      +  +KI  D G+A+      +  T
Sbjct: 127 AELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKI-IDFGLAELFK-SDEHST 184

Query: 101 TEMVILRYRAPKILFGRTNCFAAIDMWAV---LYLL 133
                  Y AP++           D+W+    +Y L
Sbjct: 185 NAAGTALYMAPEVFKRDVT--FKCDIWSAGVVMYFL 218

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 49.2 bits (118), Expect = 4e-08
 Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 26/107 (24%)

Query: 39  SHLIKKFLYCILSGISYCHARKIIHRDLTTMNLL--ADIENKTVKIAADSGMAKEIDAPF 96
           SH I++    IL  I+YCH+  I+HR+L   NLL  +  +   VK+ AD G+A E++   
Sbjct: 131 SHCIQQ----ILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKL-ADFGLAIEVN--- 182

Query: 97  DAHTTEMVILR-------YRAPKILFGRTNCFAAIDMWA---VLYLL 133
                +            Y +P++L  +      +D+WA   +LY+L
Sbjct: 183 -----DSEAWHGFAGTPGYLSPEVL-KKDPYSKPVDIWACGVILYIL 223

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 49.2 bits (118), Expect = 5e-08
 Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 11/100 (11%)

Query: 39  SHLIKKFLYCILSGISYCHARKIIHRDLTTMNLL--ADIENKTVKIAADSGMAKEIDAPF 96
           S++++K    ++S +S+ H   ++HRDL   NLL   + +N  +KI  D G A+      
Sbjct: 109 SYIMRK----LVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKI-IDFGFARLKPPDN 163

Query: 97  DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV---LYLL 133
               T    L Y AP++L  +     + D+W++   LY +
Sbjct: 164 QPLKTPCFTLHYAAPELL-NQNGYDESCDLWSLGVILYTM 202

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 49.0 bits (117), Expect = 6e-08
 Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 12/100 (12%)

Query: 39  SHLIKKFLYCILSGISYCHARKIIHRDLTTMNLL--ADIENKTVKIAADSGMAKEIDAPF 96
           S ++K     I   I Y H+  I HRD+   NLL  +   N  +K+  D G AKE     
Sbjct: 164 SEIMKS----IGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKL-TDFGFAKETT-SH 217

Query: 97  DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV---LYLL 133
           ++ TT      Y AP++L G      + DMW++   +Y+L
Sbjct: 218 NSLTTPCYTPYYVAPEVL-GPEKYDKSCDMWSLGVIMYIL 256

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 48.7 bits (117), Expect = 7e-08
 Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 26/107 (24%)

Query: 39  SHLIKKFLYCILSGISYCHARKIIHRDLTTMNLL--ADIENKTVKIAADSGMAKEIDAPF 96
           SH I++    IL  I+YCH+  I+HR+L   NLL  +  +   VK+ AD G+A E++   
Sbjct: 108 SHCIQQ----ILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKL-ADFGLAIEVN--- 159

Query: 97  DAHTTEMVILR-------YRAPKILFGRTNCFAAIDMWA---VLYLL 133
                +            Y +P++L  +      +D+WA   +LY+L
Sbjct: 160 -----DSEAWHGFAGTPGYLSPEVL-KKDPYSKPVDIWACGVILYIL 200

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 48.4 bits (116), Expect = 7e-08
 Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 4/78 (5%)

Query: 18  LVFEYV-NINLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           L+ EY+   +L  ++Q++   +D   + ++   I  G+ Y   ++ IHRDL T N+L + 
Sbjct: 90  LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE- 148

Query: 76  ENKTVKIAADSGMAKEID 93
               VKI  D G+ K + 
Sbjct: 149 NENRVKI-GDFGLTKVLP 165

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 48.4 bits (116), Expect = 7e-08
 Identities = 21/99 (21%), Positives = 38/99 (38%), Gaps = 10/99 (10%)

Query: 18  LVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           +    +N ++L   +++  P+        +  I S +   HA    HRD+   N+L    
Sbjct: 111 VDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVS-A 169

Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTE--MVI--LRYRAP 111
           +    +  D G+A       D   T+    +  L Y AP
Sbjct: 170 DDFAYL-VDFGIASATT---DEKLTQLGNTVGTLYYMAP 204

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 48.5 bits (116), Expect = 8e-08
 Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 4/78 (5%)

Query: 18  LVFEYV-NINLHKFIQQYHP-MDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           L+ EY+   +L  ++Q++   +D   + ++   I  G+ Y   ++ IHRDL T N+L + 
Sbjct: 121 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE- 179

Query: 76  ENKTVKIAADSGMAKEID 93
               VKI  D G+ K + 
Sbjct: 180 NENRVKI-GDFGLTKVLP 196

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 48.5 bits (116), Expect = 8e-08
 Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 13/92 (14%)

Query: 49  ILSGISYCHARKIIHRDLTTMNLL--ADIENKTVKIAADSGMAKEIDAP--FDAHTTEMV 104
           I + I + H+  I HRD+   NLL  +  ++  +K+  D G AKE           T   
Sbjct: 137 IGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKL-TDFGFAKETTQNALQTPCYT--- 192

Query: 105 ILRYRAPKILFGRTNCFAAIDMWA---VLYLL 133
              Y AP++L G      + DMW+   ++Y+L
Sbjct: 193 -PYYVAPEVL-GPEKYDKSCDMWSLGVIMYIL 222

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 47.7 bits (114), Expect = 2e-07
 Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 4/79 (5%)

Query: 18  LVFEYV-NINLHKFIQQYHP-MDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           LV EY+ +  L  F+Q++   +D+  +  +   I  G+ Y  +R+ +HRDL   N+L + 
Sbjct: 103 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVE- 161

Query: 76  ENKTVKIAADSGMAKEIDA 94
               VKI AD G+AK +  
Sbjct: 162 SEAHVKI-ADFGLAKLLPL 179

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 47.6 bits (113), Expect = 2e-07
 Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 3/66 (4%)

Query: 18  LVFEYVNINLHKFIQQ--YHPMDSHLIKKFLYCILSGISYCHAR-KIIHRDLTTMNLLAD 74
           +VFE +  +L K+I +  Y  +    +KK +  +L G+ Y H + +IIH D+   N+L  
Sbjct: 122 MVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLS 181

Query: 75  IENKTV 80
           +  + +
Sbjct: 182 VNEQYI 187

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 47.2 bits (112), Expect = 2e-07
 Identities = 26/122 (21%), Positives = 51/122 (41%), Gaps = 19/122 (15%)

Query: 18  LVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           +V EYV   +L +   Q   +       +L  IL  +SY H+  +++ DL   N++  + 
Sbjct: 161 IVMEYVGGQSLKRSKGQ--KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIM--LT 216

Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVI--LRYRAPKILFGRTNCFAAIDMWA---VLY 131
            + +K+  D G    I++         +     ++AP+I+        A D++     L 
Sbjct: 217 EEQLKL-IDLGAVSRINS------FGYLYGTPGFQAPEIVRTGPT--VATDIYTVGRTLA 267

Query: 132 LL 133
            L
Sbjct: 268 AL 269

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 47.1 bits (112), Expect = 2e-07
 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 6/78 (7%)

Query: 18  LVFEYV-NINLHKFIQQ--YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
           +V  Y+ + +L  FI+   ++P    LI  F   +  G+ +  ++K +HRDL   N + D
Sbjct: 168 VVLPYMKHGDLRNFIRNETHNPTVKDLIG-FGLQVAKGMKFLASKKFVHRDLAARNCMLD 226

Query: 75  IENKTVKIAADSGMAKEI 92
            E  TVK+ AD G+A+++
Sbjct: 227 -EKFTVKV-ADFGLARDM 242

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 46.9 bits (112), Expect = 3e-07
 Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 11/83 (13%)

Query: 18  LVFEYV-NINLHKFIQQYHPMDS-------HLIKKFLYCILSGISYCHARKIIHRDLTTM 69
           ++  ++ + +LH F+      ++        L++ F+  I  G+ Y  +R  IHRDL   
Sbjct: 108 VILPFMKHGDLHAFLLASRIGENPFNLPLQTLVR-FMVDIACGMEYLSSRNFIHRDLAAR 166

Query: 70  NLLADIENKTVKIAADSGMAKEI 92
           N +   E+ TV + AD G++++I
Sbjct: 167 NCMLA-EDMTVCV-ADFGLSRKI 187

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 46.9 bits (112), Expect = 3e-07
 Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 13/86 (15%)

Query: 18  LVFEYV-NINLHKFIQQYHPMDSHLIK----------KFLYCILSGISYCHARKIIHRDL 66
           ++ E +   +L  +++   P  ++             +    I  G++Y +A K +HRDL
Sbjct: 105 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDL 164

Query: 67  TTMNLLADIENKTVKIAADSGMAKEI 92
              N +   E+ TVKI  D GM ++I
Sbjct: 165 AARNCMVA-EDFTVKI-GDFGMTRDI 188

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 46.9 bits (112), Expect = 3e-07
 Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 11/83 (13%)

Query: 18  LVFEYV-NINLHKFIQQYHPMDS-------HLIKKFLYCILSGISYCHARKIIHRDLTTM 69
           ++  ++   +LH ++                L+K F+  I  G+ Y   R  +HRDL   
Sbjct: 118 VILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLK-FMVDIALGMEYLSNRNFLHRDLAAR 176

Query: 70  NLLADIENKTVKIAADSGMAKEI 92
           N +   ++ TV + AD G++K+I
Sbjct: 177 NCMLR-DDMTVCV-ADFGLSKKI 197

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 46.9 bits (112), Expect = 3e-07
 Identities = 23/93 (24%), Positives = 39/93 (41%), Gaps = 19/93 (20%)

Query: 18  LVFEYV-NINLHKFIQQYHPMDSHLIK----------------KFLYCILSGISYCHARK 60
           L  EY  + NL  F+++   +++                     F   +  G+ Y   ++
Sbjct: 103 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ 162

Query: 61  IIHRDLTTMNLLADIENKTVKIAADSGMAKEID 93
            IHRDL   N+L   EN   KI AD G+++  +
Sbjct: 163 FIHRDLAARNILVG-ENYVAKI-ADFGLSRGQE 193

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 46.5 bits (111), Expect = 3e-07
 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 3/49 (6%)

Query: 46  LYCILSGISYCHARKIIHRDLTTMNLL--ADIENKTVKIAADSGMAKEI 92
           +  I   I Y H+  I HRD+   NLL  +   N  +K+  D G AKE 
Sbjct: 123 MKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKL-TDFGFAKET 170

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 46.7 bits (111), Expect = 4e-07
 Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 7/115 (6%)

Query: 18  LVFEYV-NINLHKFIQQYHPMDSHLIK--KFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
           ++ E++   NL  ++++ +  +   +        I S + Y   +  IHR+L   N L  
Sbjct: 293 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVG 352

Query: 75  IENKTVKIAADSGMAKEI-DAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWA 128
            EN  VK+ AD G+++ +    + AH      +++ AP+ L        + D+WA
Sbjct: 353 -ENHLVKV-ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS-DVWA 404

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 46.6 bits (110), Expect = 4e-07
 Identities = 37/123 (30%), Positives = 53/123 (43%), Gaps = 17/123 (13%)

Query: 18  LVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
            V EYVN  +L   IQQ           +   I  G+ +  ++ II+RDL   N++ D E
Sbjct: 419 FVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSE 478

Query: 77  NKTVKIAADSGMAKEIDAPFDAHTT-----EMVILRYRAPKILFGRTNCFAAIDMWA--- 128
              +KI AD GM KE         T     +     Y AP+I+  +    +  D WA   
Sbjct: 479 GH-IKI-ADFGMCKENIWDGVTTKTFCGTPD-----YIAPEIIAYQPYGKSV-DWWAFGV 530

Query: 129 VLY 131
           +LY
Sbjct: 531 LLY 533

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 46.5 bits (111), Expect = 4e-07
 Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 6/78 (7%)

Query: 18  LVFEYV-NINLHKFIQQ--YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
           +V  Y+ + +L  FI+   ++P    LI  F   +  G+ Y  ++K +HRDL   N + D
Sbjct: 104 VVLPYMKHGDLRNFIRNETHNPTVKDLIG-FGLQVAKGMKYLASKKFVHRDLAARNCMLD 162

Query: 75  IENKTVKIAADSGMAKEI 92
            E  TVK+ AD G+A+++
Sbjct: 163 -EKFTVKV-ADFGLARDM 178

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 46.4 bits (110), Expect = 5e-07
 Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 7/115 (6%)

Query: 18  LVFEYV-NINLHKFIQQYHPMDSHLIK--KFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
           +V EY+   +L  F++        L +       I SG++Y      +HRDL   N+L  
Sbjct: 338 IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG 397

Query: 75  IENKTVKIAADSGMAKEI-DAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWA 128
            EN   K+ AD G+A+ I D  + A       +++ AP+          + D+W+
Sbjct: 398 -ENLVCKV-ADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS-DVWS 449

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 46.1 bits (109), Expect = 5e-07
 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 2/49 (4%)

Query: 44  KFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEI 92
            + + +  G+ +  +RK IHRDL   N+L   E   VKI  D G+A++I
Sbjct: 197 CYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKI-CDFGLARDI 243

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 46.0 bits (109), Expect = 7e-07
 Identities = 26/114 (22%), Positives = 54/114 (47%), Gaps = 7/114 (6%)

Query: 18  LVFEYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
            + + +N  +LH  + Q+       ++ +   I+ G+ + H R +++RDL   N+L D E
Sbjct: 269 FILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD-E 327

Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMV-ILRYRAPKILFGRTNCFAAIDMWAV 129
           +  V+I +D G+A +            V    Y AP++L       ++ D +++
Sbjct: 328 HGHVRI-SDLGLACDFS---KKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSL 377

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 45.8 bits (109), Expect = 7e-07
 Identities = 22/86 (25%), Positives = 34/86 (39%), Gaps = 13/86 (15%)

Query: 18  LVFEYV-NINLHKFIQQYHPMDSH--------LIKKFLYCILSGISYCHARKIIHRDLTT 68
           ++ E +   +L  F+++  P  S         L+      I  G  Y      IHRD+  
Sbjct: 151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH-VARDIACGCQYLEENHFIHRDIAA 209

Query: 69  MNLL--ADIENKTVKIAADSGMAKEI 92
            N L       +  KI  D GMA++I
Sbjct: 210 RNCLLTCPGPGRVAKI-GDFGMARDI 234

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 45.9 bits (109), Expect = 8e-07
 Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 7/115 (6%)

Query: 18  LVFEYV-NINLHKFIQQYHPMDSHLIK--KFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
           +V EY+   +L  F++        L +       I SG++Y      +HRDL   N+L  
Sbjct: 255 IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG 314

Query: 75  IENKTVKIAADSGMAKEI-DAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWA 128
            EN   K+ AD G+A+ I D  + A       +++ AP+          + D+W+
Sbjct: 315 -ENLVCKV-ADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS-DVWS 366

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 45.3 bits (108), Expect = 9e-07
 Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 6/79 (7%)

Query: 18  LVFEYV-NINLHKFIQQYHPMDSHLIKKFLYC--ILSGISYCHARKIIHRDLTTMNLLAD 74
           +V E V   +   F++        +           +G+ Y  ++  IHRDL   N L  
Sbjct: 189 IVMELVQGGDFLTFLRT-EGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVT 247

Query: 75  IENKTVKIAADSGMAKEID 93
            E   +KI +D GM++E  
Sbjct: 248 -EKNVLKI-SDFGMSREEA 264

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 45.4 bits (108), Expect = 1e-06
 Identities = 37/125 (29%), Positives = 56/125 (44%), Gaps = 21/125 (16%)

Query: 18  LVFEYVN---INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
            V EYVN   +  H  +Q+   +     + +   I   ++Y H R II+RDL   N+L D
Sbjct: 130 FVIEYVNGGDLMFH--MQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD 187

Query: 75  IENKTVKIAADSGMAKE-IDAPFDAH----TTEMVILRYRAPKILFGRTNCFAAIDMWA- 128
            E   +K+  D GM KE +           T       Y AP+IL G    F ++D WA 
Sbjct: 188 SEGH-IKL-TDYGMCKEGLRPGDTTSTFCGTPN-----YIAPEILRGEDYGF-SVDWWAL 239

Query: 129 --VLY 131
             +++
Sbjct: 240 GVLMF 244

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 45.4 bits (108), Expect = 1e-06
 Identities = 22/86 (25%), Positives = 34/86 (39%), Gaps = 13/86 (15%)

Query: 18  LVFEYV-NINLHKFIQQYHPMDSH--------LIKKFLYCILSGISYCHARKIIHRDLTT 68
           ++ E +   +L  F+++  P  S         L+      I  G  Y      IHRD+  
Sbjct: 110 ILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH-VARDIACGCQYLEENHFIHRDIAA 168

Query: 69  MNLL--ADIENKTVKIAADSGMAKEI 92
            N L       +  KI  D GMA++I
Sbjct: 169 RNCLLTCPGPGRVAKI-GDFGMARDI 193

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 45.6 bits (108), Expect = 1e-06
 Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 15/91 (16%)

Query: 48  CILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAH----TTEM 103
            I  G+   H  +I++RDL   N+L D     ++I +D G+A  +           T   
Sbjct: 294 EICCGLEDLHRERIVYRDLKPENILLDDHGH-IRI-SDLGLAVHVPEGQTIKGRVGTVG- 350

Query: 104 VILRYRAPKILFGRTNCFAAIDMWA---VLY 131
               Y AP+++      F+  D WA   +LY
Sbjct: 351 ----YMAPEVVKNERYTFSP-DWWALGCLLY 376

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 45.0 bits (107), Expect = 1e-06
 Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 6/78 (7%)

Query: 18  LVFEYV-NINLHKFIQQ--YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
           ++  Y+ + +L +FI+    +P    LI  F   +  G+ Y   +K +HRDL   N + D
Sbjct: 100 VLLPYMCHGDLLQFIRSPQRNPTVKDLIS-FGLQVARGMEYLAEQKFVHRDLAARNCMLD 158

Query: 75  IENKTVKIAADSGMAKEI 92
            E+ TVK+ AD G+A++I
Sbjct: 159 -ESFTVKV-ADFGLARDI 174

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 44.9 bits (107), Expect = 1e-06
 Identities = 36/125 (28%), Positives = 56/125 (44%), Gaps = 21/125 (16%)

Query: 18  LVFEYVN---INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
            V EYVN   +  H  +Q+   +     + +   I   ++Y H R II+RDL   N+L D
Sbjct: 87  FVIEYVNGGDLMFH--MQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD 144

Query: 75  IENKTVKIAADSGMAKE-IDAPFDAH----TTEMVILRYRAPKILFGRTNCFAAIDMWA- 128
            E   +K+  D GM KE +           T       Y AP+IL G  +   ++D WA 
Sbjct: 145 SEGH-IKL-TDYGMCKEGLRPGDTTSTFCGTPN-----YIAPEILRGE-DYGFSVDWWAL 196

Query: 129 --VLY 131
             +++
Sbjct: 197 GVLMF 201

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 44.9 bits (107), Expect = 1e-06
 Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 2/49 (4%)

Query: 44  KFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEI 92
            F Y +  G+++  ++  IHRDL   N+L     +  KI  D G+A++I
Sbjct: 149 SFSYQVAKGMAFLASKNCIHRDLAARNILLT-HGRITKI-CDFGLARDI 195

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 44.6 bits (106), Expect = 2e-06
 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 2/49 (4%)

Query: 44  KFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEI 92
            + + +  G+ +  +RK IHRDL   N+L   E   VKI  D G+A++I
Sbjct: 152 CYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKI-CDFGLARDI 198

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 44.3 bits (105), Expect = 2e-06
 Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 5/78 (6%)

Query: 18  LVFEYV-NINLHKFIQQYHPMDSHLIK--KFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
           +V EY+   +L  +++             KF   +   + Y      +HRDL   N+L  
Sbjct: 264 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVS 323

Query: 75  IENKTVKIAADSGMAKEI 92
            E+   K+ +D G+ KE 
Sbjct: 324 -EDNVAKV-SDFGLTKEA 339

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 44.1 bits (105), Expect = 2e-06
 Identities = 40/125 (32%), Positives = 56/125 (44%), Gaps = 21/125 (16%)

Query: 18  LVFEYVN---INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
            V E+VN   +  H  IQ+    D    + +   I+S + + H + II+RDL   N+L D
Sbjct: 101 FVMEFVNGGDLMFH--IQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLD 158

Query: 75  IENKTVKIAADSGMAKE-IDAPFDAH----TTEMVILRYRAPKILFGRTNCFAAIDMWA- 128
            E    K+ AD GM KE I           T +     Y AP+IL        A+D WA 
Sbjct: 159 HEGH-CKL-ADFGMCKEGICNGVTTATFCGTPD-----YIAPEILQEMLYGP-AVDWWAM 210

Query: 129 --VLY 131
             +LY
Sbjct: 211 GVLLY 215

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 43.9 bits (104), Expect = 3e-06
 Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 5/79 (6%)

Query: 18  LVFEYV-NINLHKFIQQYHPMDSHLIK--KFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
           ++ E++   +L  F++        L K   F   I  G+++   R  IHRDL   N+L  
Sbjct: 259 IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVS 318

Query: 75  IENKTVKIAADSGMAKEID 93
             +   KI AD G+A+ I+
Sbjct: 319 -ASLVCKI-ADFGLARVIE 335

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 43.9 bits (104), Expect = 3e-06
 Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 4/79 (5%)

Query: 18  LVFEYV-NINLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           LV +Y+   +L   ++Q+   +   L+  +   I  G+ Y     ++HR+L   N+L   
Sbjct: 91  LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLK- 149

Query: 76  ENKTVKIAADSGMAKEIDA 94
               V++ AD G+A  +  
Sbjct: 150 SPSQVQV-ADFGVADLLPP 167

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 43.8 bits (104), Expect = 3e-06
 Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 2/49 (4%)

Query: 44  KFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEI 92
                + +G++Y   RK +HRDL T N L   EN  VKI AD G+++ I
Sbjct: 178 CIARQVAAGMAYLSERKFVHRDLATRNCLVG-ENMVVKI-ADFGLSRNI 224

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 43.8 bits (104), Expect = 3e-06
 Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 5/79 (6%)

Query: 18  LVFEYV-NINLHKFIQQYHPMDSHLIK--KFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
           ++ E++   NL  ++++ +  +   +        I S + Y   +  IHRDL   N L  
Sbjct: 86  IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 145

Query: 75  IENKTVKIAADSGMAKEID 93
            EN  VK+ AD G+++ + 
Sbjct: 146 -ENHLVKV-ADFGLSRLMT 162

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 43.8 bits (104), Expect = 3e-06
 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)

Query: 44  KFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEI 92
            F Y +  G+ +   +  +HRDL   N+L     K VKI  D G+A++I
Sbjct: 176 CFAYQVAKGMEFLEFKSCVHRDLAARNVLVT-HGKVVKI-CDFGLARDI 222

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 44.0 bits (104), Expect = 3e-06
 Identities = 32/123 (26%), Positives = 52/123 (42%), Gaps = 13/123 (10%)

Query: 18  LVFEYVN-----INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLL 72
           LV   +N      +++   +            +   I+SG+ + H R II+RDL   N+L
Sbjct: 262 LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVL 321

Query: 73  ADIENKTVKIAADSGMAKEIDAPFDAHTTEMV-ILRYRAPKILFGRTNCFAAIDMWA--- 128
            D +   V+I +D G+A E        T        + AP++L G    F+  D +A   
Sbjct: 322 LDDDGN-VRI-SDLGLAVE-LKAGQTKTKGYAGTPGFMAPELLLGEEYDFSV-DYFALGV 377

Query: 129 VLY 131
            LY
Sbjct: 378 TLY 380

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 43.8 bits (104), Expect = 3e-06
 Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 18/91 (19%)

Query: 18  LVFEYV-NINLHKFIQQYHPMDSHLIK---------------KFLYCILSGISYCHARKI 61
           +VFEY+ + +L++F++ + P    L                      + +G+ Y      
Sbjct: 120 MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHF 179

Query: 62  IHRDLTTMNLLADIENKTVKIAADSGMAKEI 92
           +HRDL T N L   +   VKI  D GM+++I
Sbjct: 180 VHRDLATRNCLVG-QGLVVKI-GDFGMSRDI 208

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 43.8 bits (104), Expect = 4e-06
 Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 19/92 (20%)

Query: 18  LVFEYV-NINLHKFIQQYHPMDSHLIK----------------KFLYCILSGISYCHARK 60
           ++ EY    NL ++++   P                          Y +  G+ Y  ++K
Sbjct: 118 VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK 177

Query: 61  IIHRDLTTMNLLADIENKTVKIAADSGMAKEI 92
            IHRDL   N+L   EN  +KI AD G+A++I
Sbjct: 178 CIHRDLAARNVLVT-ENNVMKI-ADFGLARDI 207

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 43.9 bits (104), Expect = 4e-06
 Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 2/49 (4%)

Query: 44  KFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEI 92
              Y +  G+ Y  ++K IHRDL   N+L   E+  +KI AD G+A++I
Sbjct: 195 SCAYQVARGMEYLASKKCIHRDLAARNVLVT-EDNVMKI-ADFGLARDI 241

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 43.8 bits (104), Expect = 4e-06
 Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 4/79 (5%)

Query: 18  LVFEYV-NINLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           L+ + +    L  +++++   + S  +  +   I  G++Y   R+++HRDL   N+L   
Sbjct: 93  LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK- 151

Query: 76  ENKTVKIAADSGMAKEIDA 94
             + VKI  D G+AK + A
Sbjct: 152 TPQHVKI-TDFGLAKLLGA 169

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 43.4 bits (103), Expect = 4e-06
 Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 2/49 (4%)

Query: 44  KFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEI 92
            F   +  G+++  ++  IHRD+   N+L        KI  D G+A++I
Sbjct: 168 HFSSQVAQGMAFLASKNCIHRDVAARNVLLT-NGHVAKI-GDFGLARDI 214

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 43.4 bits (103), Expect = 5e-06
 Identities = 38/125 (30%), Positives = 54/125 (43%), Gaps = 21/125 (16%)

Query: 18  LVFEYVN---INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
            V EYVN   +  H  IQQ           +   I  G+ +  ++ II+RDL   N++ D
Sbjct: 98  FVMEYVNGGDLMYH--IQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLD 155

Query: 75  IENKTVKIAADSGMAKE-IDAPFDAH----TTEMVILRYRAPKILFGRTNCFAAIDMWA- 128
            E   +KI AD GM KE I           T +     Y AP+I+  +    +  D WA 
Sbjct: 156 SEGH-IKI-ADFGMCKENIWDGVTTKTFCGTPD-----YIAPEIIAYQPYGKSV-DWWAF 207

Query: 129 --VLY 131
             +LY
Sbjct: 208 GVLLY 212

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 43.4 bits (103), Expect = 5e-06
 Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 18/93 (19%)

Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTT------- 101
           I+S + Y H + IIHRDL   N+L + E+  ++I  D G AK +                
Sbjct: 139 IVSALEYLHGKGIIHRDLKPENILLN-EDMHIQI-TDFGTAKVLSPESKQARANSFVGTA 196

Query: 102 EMVILRYRAPKILFGRTNCFAAIDMWA---VLY 131
           +     Y +P++L  ++ C  + D+WA   ++Y
Sbjct: 197 Q-----YVSPELLTEKSAC-KSSDLWALGCIIY 223

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 43.4 bits (103), Expect = 5e-06
 Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 5/78 (6%)

Query: 18  LVFEYV-NINLHKFIQQYHPMDSHLIK--KFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
           +V EY+   +L  +++             KF   +   + Y      +HRDL   N+L  
Sbjct: 92  IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVS 151

Query: 75  IENKTVKIAADSGMAKEI 92
            E+   K+ +D G+ KE 
Sbjct: 152 -EDNVAKV-SDFGLTKEA 167

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 43.3 bits (102), Expect = 5e-06
 Identities = 17/78 (21%), Positives = 39/78 (50%), Gaps = 4/78 (5%)

Query: 18  LVFEYV-NINLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           ++ E      L  F+Q     +D   +  + Y + + ++Y  +++ +HRD+   N+L   
Sbjct: 467 IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS- 525

Query: 76  ENKTVKIAADSGMAKEID 93
            N  VK+  D G+++ ++
Sbjct: 526 SNDCVKL-GDFGLSRYME 542

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 43.1 bits (102), Expect = 5e-06
 Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 19/92 (20%)

Query: 18  LVFEYV-NINLHKFIQQYHPMDSHLIK----------------KFLYCILSGISYCHARK 60
           ++ EY    NL ++++   P                          Y +  G+ Y  ++K
Sbjct: 164 VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK 223

Query: 61  IIHRDLTTMNLLADIENKTVKIAADSGMAKEI 92
            IHRDL   N+L   EN  +KI AD G+A++I
Sbjct: 224 CIHRDLAARNVLVT-ENNVMKI-ADFGLARDI 253

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 43.1 bits (102), Expect = 6e-06
 Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 4/79 (5%)

Query: 18  LVFEYV-NINLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           L+ + +    L  +++++   + S  +  +   I  G++Y   R+++HRDL   N+L   
Sbjct: 93  LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK- 151

Query: 76  ENKTVKIAADSGMAKEIDA 94
             + VKI  D G+AK + A
Sbjct: 152 TPQHVKI-TDFGLAKLLGA 169

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 43.0 bits (102), Expect = 6e-06
 Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 3/86 (3%)

Query: 18  LVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           LV E      L+K++QQ   +    I + ++ +  G+ Y      +HRDL   N+L    
Sbjct: 94  LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLV-T 152

Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTE 102
               KI +D G++K + A  + +  +
Sbjct: 153 QHYAKI-SDFGLSKALRADENYYKAQ 177

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 43.0 bits (102), Expect = 7e-06
 Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 2/49 (4%)

Query: 44  KFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEI 92
            F + I  G+ Y    K++HRDL   N+L   E + +KI +D G+++++
Sbjct: 154 SFAWQISQGMQYLAEMKLVHRDLAARNILVA-EGRKMKI-SDFGLSRDV 200

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 42.2 bits (100), Expect = 1e-05
 Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 19/92 (20%)

Query: 18  LVFEYV-NINLHKFIQQYHPMDSHL-------------IKKFLYC---ILSGISYCHARK 60
           +VFEY+ + +L+KF++ + P    L             + + L+    I SG+ Y  ++ 
Sbjct: 94  MVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH 153

Query: 61  IIHRDLTTMNLLADIENKTVKIAADSGMAKEI 92
            +HRDL T N L    N  VKI  D GM++++
Sbjct: 154 FVHRDLATRNCLVG-ANLLVKI-GDFGMSRDV 183

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 42.2 bits (100), Expect = 1e-05
 Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 21/125 (16%)

Query: 18  LVFEYVN---INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
            V EY N   +  H  + +         + +   I+S + Y H+R +++RD+   NL+ D
Sbjct: 82  FVMEYANGGELFFH--LSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD 139

Query: 75  IENKTVKIAADSGMAKE-IDAPFDAH----TTEMVILRYRAPKILFGRTNCFAAIDMWA- 128
            +   +KI  D G+ KE I           T E     Y AP++L    +   A+D W  
Sbjct: 140 KDGH-IKI-TDFGLCKEGISDGATMKTFCGTPE-----YLAPEVLED-NDYGRAVDWWGL 191

Query: 129 --VLY 131
             V+Y
Sbjct: 192 GVVMY 196

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 42.2 bits (100), Expect = 1e-05
 Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 7/77 (9%)

Query: 18  LVFEYVN---INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
            V EY+N   +  H  IQ  H  D      +   I+ G+ + H++ I++RDL   N+L D
Sbjct: 95  FVMEYLNGGDLMYH--IQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLD 152

Query: 75  IENKTVKIAADSGMAKE 91
            +   +KI AD GM KE
Sbjct: 153 KDGH-IKI-ADFGMCKE 167

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 42.0 bits (99), Expect = 1e-05
 Identities = 21/88 (23%), Positives = 34/88 (38%), Gaps = 9/88 (10%)

Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMV-ILR 107
           I+  I   H    +HRD+   N+L D     +++ AD G   ++ A     +   V    
Sbjct: 171 IVMAIDSVHRLGYVHRDIKPDNILLDRCGH-IRL-ADFGSCLKLRADGTVRSLVAVGTPD 228

Query: 108 YRAPKILFGRTNCFA------AIDMWAV 129
           Y +P+IL                D WA+
Sbjct: 229 YLSPEILQAVGGGPGTGSYGPECDWWAL 256

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 42.2 bits (100), Expect = 1e-05
 Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 16/92 (17%)

Query: 48  CILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKE-IDAPFDAH----TTE 102
            I S + Y H+  I++RDL   N+L D +   + +  D G+ KE I+          T E
Sbjct: 147 EIASALGYLHSLNIVYRDLKPENILLDSQGH-IVL-TDFGLCKENIEHNSTTSTFCGTPE 204

Query: 103 MVILRYRAPKILFGRTNCFAAIDMWA---VLY 131
                Y AP++L  +       D W    VLY
Sbjct: 205 -----YLAPEVLHKQPYDRTV-DWWCLGAVLY 230

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 41.9 bits (98), Expect = 2e-05
 Identities = 22/98 (22%), Positives = 45/98 (45%), Gaps = 19/98 (19%)

Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKI-AADSGMAKEIDAPFDAHTTEMVILR 107
           +++ + + H++  +HRD+   N L  +  +  ++   D G+AK     +   +T   I  
Sbjct: 112 MINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK----KYRDTSTHQHI-P 166

Query: 108 YRAPKILFGRTNCFAAI------------DMWAVLYLL 133
           YR  K L G T  +A++            D+ ++ Y+L
Sbjct: 167 YRENKNLTG-TARYASVNTHLGIEQSRRDDLESLGYVL 203

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 41.8 bits (98), Expect = 2e-05
 Identities = 14/69 (20%), Positives = 35/69 (50%), Gaps = 3/69 (4%)

Query: 27  LHKFIQQYHPMDSHLIKKFLYCILSGISYCHA-RKIIHRDLTTMNLLADIENKTVKIAAD 85
           L + +++   +   ++ K    ++ G++Y     KI+HRD+   N+L +     +K+  D
Sbjct: 118 LDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVN-SRGEIKL-CD 175

Query: 86  SGMAKEIDA 94
            G++ ++  
Sbjct: 176 FGVSGQLID 184

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 41.6 bits (98), Expect = 2e-05
 Identities = 17/79 (21%), Positives = 34/79 (43%), Gaps = 4/79 (5%)

Query: 18  LVFEYVNINLHKFIQQYH-PMDSHLIKKFLYCILSGISYCHA-RKIIHRDLTTMNLLADI 75
           +  E +     K  ++   P+   ++ K    I+  + Y      +IHRD+   N+L D 
Sbjct: 101 IAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLD- 159

Query: 76  ENKTVKIAADSGMAKEIDA 94
           E   +K+  D G++  +  
Sbjct: 160 ERGQIKL-CDFGISGRLVD 177

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 41.8 bits (99), Expect = 2e-05
 Identities = 21/92 (22%), Positives = 40/92 (43%), Gaps = 19/92 (20%)

Query: 18  LVFEYV-NINLHKFIQQYHPMDSHLIK----------------KFLYCILSGISYCHARK 60
           ++F Y  + +LH+F+    P                         +  I +G+ Y  +  
Sbjct: 89  MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH 148

Query: 61  IIHRDLTTMNLLADIENKTVKIAADSGMAKEI 92
           ++H+DL T N+L   +   VKI +D G+ +E+
Sbjct: 149 VVHKDLATRNVLVY-DKLNVKI-SDLGLFREV 178

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 41.6 bits (98), Expect = 2e-05
 Identities = 34/119 (28%), Positives = 63/119 (52%), Gaps = 14/119 (11%)

Query: 18  LVFEYV-NINLHKFIQQYHPMDS--HLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
           +V EY+ N +L  F++++    +   L+   L  I SG+ Y      +HRDL   N+L +
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQFTVIQLVG-MLRGIASGMKYLSDMGYVHRDLAARNILIN 181

Query: 75  IENKTVKIAADSGMAKEI-DAPFDAHTTE--MVILRYRAPK-ILFGRTNCF-AAIDMWA 128
             N   K+ +D G+ + + D P  A+TT    + +R+ +P+ I + +   F +A D+W+
Sbjct: 182 -SNLVCKV-SDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK---FTSASDVWS 235

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 41.5 bits (98), Expect = 2e-05
 Identities = 19/86 (22%), Positives = 37/86 (43%), Gaps = 4/86 (4%)

Query: 18  LVFEYV-NINLHKFIQQYHP-MDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           +V E     +L   ++++        + ++   +  G+ Y  +++ IHRDL   NLL   
Sbjct: 97  MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLA- 155

Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTT 101
               VKI  D G+ + +    D +  
Sbjct: 156 TRDLVKI-GDFGLMRALPQNDDHYVM 180

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 41.1 bits (97), Expect = 3e-05
 Identities = 17/78 (21%), Positives = 40/78 (51%), Gaps = 4/78 (5%)

Query: 18  LVFEYV-NINLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           ++ E      L  F+Q   + +D   +  + Y + + ++Y  +++ +HRD+   N+L   
Sbjct: 92  IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS- 150

Query: 76  ENKTVKIAADSGMAKEID 93
            N  VK+  D G+++ ++
Sbjct: 151 SNDCVKL-GDFGLSRYME 167

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 41.1 bits (97), Expect = 3e-05
 Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 6/89 (6%)

Query: 18  LVFEYV-NINLHKFIQQY--HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
           +V EY+ N +L  F++ +        L+   L  + +G+ Y      +HRDL   N+L D
Sbjct: 127 IVTEYMENGSLDTFLRTHDGQFTIMQLVG-MLRGVGAGMRYLSDLGYVHRDLAARNVLVD 185

Query: 75  IENKTVKIAADSGMAKEIDAPFDAHTTEM 103
             N   K+ +D G+++ ++   DA  T  
Sbjct: 186 -SNLVCKV-SDFGLSRVLEDDPDAAYTTT 212

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 40.9 bits (96), Expect = 3e-05
 Identities = 18/86 (20%), Positives = 35/86 (40%), Gaps = 7/86 (8%)

Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMV-ILR 107
           ++  I   H    +HRD+   N+L D+    +++ AD G   ++       ++  V    
Sbjct: 184 MVIAIDSVHQLHYVHRDIKPDNILMDMNGH-IRL-ADFGSCLKLMEDGTVQSSVAVGTPD 241

Query: 108 YRAPKILFGRTNCFA----AIDMWAV 129
           Y +P+IL              D W++
Sbjct: 242 YISPEILQAMEGGKGRYGPECDWWSL 267

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 40.7 bits (96), Expect = 4e-05
 Identities = 16/79 (20%), Positives = 40/79 (50%), Gaps = 6/79 (7%)

Query: 18  LVFEYV-NINLHKFIQQ--YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
           ++ EY+ N  L  ++++  +      L++     +   + Y  +++ +HRDL   N L +
Sbjct: 96  IITEYMANGCLLNYLREMRHRFQTQQLLE-MCKDVCEAMEYLESKQFLHRDLAARNCLVN 154

Query: 75  IENKTVKIAADSGMAKEID 93
            +   VK+ +D G+++ + 
Sbjct: 155 -DQGVVKV-SDFGLSRYVL 171

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 40.8 bits (96), Expect = 4e-05
 Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 6/87 (6%)

Query: 18  LVFEYV-NINLHKFIQQY--HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
           ++ EY+ N  L KF+++         L+   L  I +G+ Y      +HRDL   N+L +
Sbjct: 123 IITEYMENGALDKFLREKDGEFSVLQLVG-MLRGIAAGMKYLANMNYVHRDLAARNILVN 181

Query: 75  IENKTVKIAADSGMAKEIDAPFDAHTT 101
             N   K+ +D G+++ ++   +A  T
Sbjct: 182 -SNLVCKV-SDFGLSRVLEDDPEATYT 206

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 40.8 bits (96), Expect = 4e-05
 Identities = 19/85 (22%), Positives = 35/85 (41%), Gaps = 6/85 (7%)

Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMV-ILR 107
           ++  +   H+   IHRD+   N+L D     +K+ AD G   +++          V    
Sbjct: 177 VVLALDAIHSMGFIHRDVKPDNMLLDKSGH-LKL-ADFGTCMKMNKEGMVRCDTAVGTPD 234

Query: 108 YRAPKILFGRTNCFA---AIDMWAV 129
           Y +P++L  +          D W+V
Sbjct: 235 YISPEVLKSQGGDGYYGRECDWWSV 259

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 40.8 bits (96), Expect = 4e-05
 Identities = 22/88 (25%), Positives = 37/88 (42%), Gaps = 13/88 (14%)

Query: 48  CILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAH----TTEM 103
            ++  + Y   ++IIHRD+   N+L D E+  V I  D  +A  +           T   
Sbjct: 123 ELVMALDYLQNQRIIHRDMKPDNILLD-EHGHVHI-TDFNIAAMLPRETQITTMAGTKP- 179

Query: 104 VILRYRAPKILFGRTNCF--AAIDMWAV 129
               Y AP++   R       A+D W++
Sbjct: 180 ----YMAPEMFSSRKGAGYSFAVDWWSL 203

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 40.3 bits (95), Expect = 5e-05
 Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 5/79 (6%)

Query: 18  LVFEYV-NINLHKFIQQYHPMDSHLIK--KFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
           ++ EY+ N +L  F++    +   + K       I  G+++   R  IHRDL   N+L  
Sbjct: 84  IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS 143

Query: 75  IENKTVKIAADSGMAKEID 93
            +  + KI AD G+A+ I+
Sbjct: 144 -DTLSCKI-ADFGLARLIE 160

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 40.4 bits (95), Expect = 6e-05
 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 2/66 (3%)

Query: 36  PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAP 95
            +    I      IL G+S+ H  K+IHRD+   N+L   EN  VK+  D G++ ++D  
Sbjct: 125 TLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLT-ENAEVKL-VDFGVSAQLDRT 182

Query: 96  FDAHTT 101
                T
Sbjct: 183 VGRRNT 188

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 40.3 bits (95), Expect = 6e-05
 Identities = 15/79 (18%), Positives = 35/79 (44%), Gaps = 6/79 (7%)

Query: 18  LVFEYV-NINLHKFIQQY--HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
           ++ E      L  ++++         L+  +   I   ++Y  +   +HRD+   N+L  
Sbjct: 89  IIMELYPYGELGHYLERNKNSLKVLTLVL-YSLQICKAMAYLESINCVHRDIAVRNILVA 147

Query: 75  IENKTVKIAADSGMAKEID 93
              + VK+  D G+++ I+
Sbjct: 148 -SPECVKL-GDFGLSRYIE 164

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 40.3 bits (95), Expect = 6e-05
 Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 2/53 (3%)

Query: 52  GISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMV 104
           G+ Y H R IIHRD+ ++N+L D EN   KI  D G++K+       H + +V
Sbjct: 151 GLHYLHTRAIIHRDVKSINILLD-ENFVPKI-TDFGISKKGTELDQTHLSTVV 201

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 40.1 bits (94), Expect = 6e-05
 Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 12/121 (9%)

Query: 18  LVFEYVN---INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARK-IIHRDLTTMNLLA 73
            V EY N   +  H  + +         + +   I+S + Y H+ K +++RDL   NL+ 
Sbjct: 225 FVMEYANGGELFFH--LSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML 282

Query: 74  DIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWA---VL 130
           D +   +KI  D G+ KE         T      Y AP++L    +   A+D W    V+
Sbjct: 283 DKDGH-IKI-TDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDN-DYGRAVDWWGLGVVM 339

Query: 131 Y 131
           Y
Sbjct: 340 Y 340

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 40.2 bits (95), Expect = 6e-05
 Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 4/78 (5%)

Query: 18  LVFEYV-NINLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           +V EY+ N  L  +++ +   ++   + +  Y +  G+++  + + IHRDL   N L D 
Sbjct: 80  IVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVD- 138

Query: 76  ENKTVKIAADSGMAKEID 93
            +  VK+ +D GM + + 
Sbjct: 139 RDLCVKV-SDFGMTRYVL 155

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 40.2 bits (95), Expect = 6e-05
 Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 16/92 (17%)

Query: 48  CILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKE-IDAPFDAH----TTE 102
            I   + + H + II+RDL   N++ + +   VK+  D G+ KE I      H    T E
Sbjct: 129 EISMALGHLHQKGIIYRDLKPENIMLNHQGH-VKL-TDFGLCKESIHDGTVTHTFCGTIE 186

Query: 103 MVILRYRAPKILFGRTNCFAAIDMWA---VLY 131
                Y AP+IL    +  A  D W+   ++Y
Sbjct: 187 -----YMAPEILMRSGHNRAV-DWWSLGALMY 212

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 39.9 bits (94), Expect = 7e-05
 Identities = 12/58 (20%), Positives = 26/58 (44%), Gaps = 2/58 (3%)

Query: 27  LHKFIQQYHPMDSHLIKKFLYCILSGISYCHA-RKIIHRDLTTMNLLADIENKTVKIA 83
             + I +   +   ++ K    I+  + + H+   +IHRD+   N+L +     VK+ 
Sbjct: 96  YKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLIN-ALGQVKMC 152

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 40.0 bits (94), Expect = 7e-05
 Identities = 15/66 (22%), Positives = 31/66 (46%), Gaps = 2/66 (3%)

Query: 36  PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAP 95
            ++   I      +L  ++Y HA+ +IHRD+ + ++L    +  VK+ +D G   +I   
Sbjct: 137 RLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLT-LDGRVKL-SDFGFCAQISKD 194

Query: 96  FDAHTT 101
                +
Sbjct: 195 VPKRKS 200

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 39.6 bits (93), Expect = 9e-05
 Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 2/66 (3%)

Query: 36  PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAP 95
            MD   I       L  + + H+ ++IHRD+ + N+L    + +VK+  D G   +I   
Sbjct: 112 CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG-MDGSVKL-TDFGFCAQITPE 169

Query: 96  FDAHTT 101
               +T
Sbjct: 170 QSKRST 175

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 39.3 bits (92), Expect = 1e-04
 Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 2/66 (3%)

Query: 36  PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAP 95
            +    I   L   L G+ Y H  + IHRD+   N+L +      K+ AD G+A ++   
Sbjct: 121 TLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLN-TEGHAKL-ADFGVAGQLTDT 178

Query: 96  FDAHTT 101
                T
Sbjct: 179 MAKRNT 184

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 39.1 bits (92), Expect = 1e-04
 Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 6/79 (7%)

Query: 18  LVFEYV-NINLHKFIQQYHPM--DSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
           LV E++ +  L  +++    +     L+      +  G++Y     +IHRDL   N L  
Sbjct: 80  LVTEFMEHGCLSDYLRTQRGLFAAETLLG-MCLDVCEGMAYLEEACVIHRDLAARNCLVG 138

Query: 75  IENKTVKIAADSGMAKEID 93
            EN+ +K+ +D GM + + 
Sbjct: 139 -ENQVIKV-SDFGMTRFVL 155

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 39.2 bits (92), Expect = 1e-04
 Identities = 14/67 (20%), Positives = 31/67 (46%), Gaps = 2/67 (2%)

Query: 35  HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDA 94
             +    I+     +L  +++ H+++IIHRDL   N+L       +++ AD G++ +   
Sbjct: 112 RGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMT-LEGDIRL-ADFGVSAKNLK 169

Query: 95  PFDAHTT 101
                 +
Sbjct: 170 TLQKRDS 176

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 39.1 bits (92), Expect = 1e-04
 Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 13/87 (14%)

Query: 48  CILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKE-IDAPFDAH----TTE 102
            +   + + H+  II+RDL   N+L D E   +K+  D G++KE ID    A+    T E
Sbjct: 134 ELALALDHLHSLGIIYRDLKPENILLDEEGH-IKL-TDFGLSKESIDHEKKAYSFCGTVE 191

Query: 103 MVILRYRAPKILFGRTNCFAAIDMWAV 129
                Y AP+++  R +  +A D W+ 
Sbjct: 192 -----YMAPEVVNRRGHTQSA-DWWSF 212

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 39.3 bits (92), Expect = 1e-04
 Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 21/99 (21%)

Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKI-AADSGMAKE-IDAPFDAHTTEMVIL 106
           ++S I Y H++  IHRD+   N L  +  K   +   D G+AK+  DA    H      +
Sbjct: 114 MISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQH------I 167

Query: 107 RYRAPKILFGRTNCFAAI------------DMWAVLYLL 133
            YR  K L G T  +A+I            D+ ++ Y+L
Sbjct: 168 PYRENKNLTG-TARYASINTHLGIEQSRRDDLESLGYVL 205

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 39.2 bits (92), Expect = 1e-04
 Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 2/66 (3%)

Query: 36  PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAP 95
           P+D   I   L  IL G+ Y H+ K IHRD+   N+L   E+  VK+ AD G+A ++   
Sbjct: 115 PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS-EHGEVKL-ADFGVAGQLTDT 172

Query: 96  FDAHTT 101
                T
Sbjct: 173 QIKRNT 178

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 39.2 bits (92), Expect = 2e-04
 Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 14/88 (15%)

Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAH------TTE 102
           I+  + + H   II+RD+   N+L D     V +  D G++KE  A           T E
Sbjct: 168 IVLALEHLHKLGIIYRDIKLENILLDSNGH-VVL-TDFGLSKEFVADETERAYDFCGTIE 225

Query: 103 MVILRYRAPKILFG-RTNCFAAIDMWAV 129
                Y AP I+ G  +    A+D W++
Sbjct: 226 -----YMAPDIVRGGDSGHDKAVDWWSL 248

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 38.8 bits (91), Expect = 2e-04
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 2/46 (4%)

Query: 48  CILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEID 93
            I+    Y H+  +I+RDL   NLL D +   +++  D G AK + 
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQV-TDFGFAKRVK 192

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 38.7 bits (91), Expect = 2e-04
 Identities = 29/110 (26%), Positives = 43/110 (39%), Gaps = 28/110 (25%)

Query: 18  LVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILS-------------GISYCHARKIIH 63
           LV+ Y+ N +L             L        LS             GI++ H    IH
Sbjct: 107 LVYVYMPNGSL----------LDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIH 156

Query: 64  RDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVI--LRYRAP 111
           RD+ + N+L D E  T KI +D G+A+  +       T  ++    Y AP
Sbjct: 157 RDIKSANILLD-EAFTAKI-SDFGLARASEKFAQTVMTSRIVGTTAYMAP 204

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 38.4 bits (90), Expect = 2e-04
 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 4/79 (5%)

Query: 18  LVFEYV-NINLHKFIQQYHP-MDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           LV E      LHKF+      +    + + L+ +  G+ Y   +  +HRDL   N+L   
Sbjct: 86  LVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLV- 144

Query: 76  ENKTVKIAADSGMAKEIDA 94
                KI +D G++K + A
Sbjct: 145 NRHYAKI-SDFGLSKALGA 162

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 38.4 bits (89), Expect = 3e-04
 Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 6/80 (7%)

Query: 18  LVFEYV-NINLHKFIQQY--HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
           LV E      LHKF+         S++ +  L+ +  G+ Y   +  +HR+L   N+L  
Sbjct: 412 LVMEMAGGGPLHKFLVGKREEIPVSNVAE-LLHQVSMGMKYLEEKNFVHRNLAARNVLLV 470

Query: 75  IENKTVKIAADSGMAKEIDA 94
                 KI +D G++K + A
Sbjct: 471 -NRHYAKI-SDFGLSKALGA 488

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 38.0 bits (89), Expect = 3e-04
 Identities = 13/85 (15%), Positives = 37/85 (43%), Gaps = 12/85 (14%)

Query: 18  LVFEYV-NINLHKFIQQYHPMDSHLIKKFLYC--ILSGISYCHARKIIHRDLTTMNLL-- 72
           LV E+V   +L  ++++ +    +++ K      + + + +     +IH ++   N+L  
Sbjct: 89  LVQEFVKFGSLDTYLKK-NKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLI 147

Query: 73  -----ADIENKTVKIAADSGMAKEI 92
                       +K+ +D G++  +
Sbjct: 148 REEDRKTGNPPFIKL-SDPGISITV 171

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 38.1 bits (89), Expect = 3e-04
 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 2/66 (3%)

Query: 36  PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAP 95
            +D   I   L  +L G+ Y H    IHRD+   N+L   E+ +V+I AD G++  +   
Sbjct: 117 VLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLG-EDGSVQI-ADFGVSAFLATG 174

Query: 96  FDAHTT 101
            D    
Sbjct: 175 GDITRN 180

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 37.8 bits (88), Expect = 4e-04
 Identities = 18/74 (24%), Positives = 31/74 (41%)

Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           +V E + I+L K   Q        + +    +L  + Y H  + +H D+   NLL   +N
Sbjct: 129 MVMERLGIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKN 188

Query: 78  KTVKIAADSGMAKE 91
                 AD G++  
Sbjct: 189 PDQVYLADYGLSYR 202

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 37.7 bits (88), Expect = 4e-04
 Identities = 14/72 (19%), Positives = 32/72 (44%), Gaps = 7/72 (9%)

Query: 18  LVFEYVNINLHKFIQQYH-----PMDSHLIKKFLYCILSGISYCHA-RKIIHRDLTTMNL 71
           +  E ++ +  KF +  +      +   ++ K     +  +++     KIIHRD+   N+
Sbjct: 98  ICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNI 157

Query: 72  LADIENKTVKIA 83
           L D  +  +K+ 
Sbjct: 158 LLD-RSGNIKLC 168

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 37.5 bits (88), Expect = 5e-04
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 49  ILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEID 93
           +   + Y H++ II+RDL   N+L D     +KI  D G AK + 
Sbjct: 115 VCLALEYLHSKDIIYRDLKPENILLDKNGH-IKI-TDFGFAKYVP 157

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 37.6 bits (86), Expect = 5e-04
 Identities = 19/115 (16%), Positives = 42/115 (36%), Gaps = 5/115 (4%)

Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHAR-KIIHRDLTTMNLLADIE 76
           +V E+    +     +         K  L+ + + ++   A  +  HRDL   N+L  ++
Sbjct: 139 IVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVL--LK 196

Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLY 131
             ++K    +   K    P      ++ I+ Y   ++       F  + M   L+
Sbjct: 197 KTSLKKLHYTLNGKSSTIPS--CGLQVSIIDYTLSRLERDGIVVFCDVSMDEDLF 249

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 37.0 bits (86), Expect = 9e-04
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 36  PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIA 83
           P+    I    +  L G++Y H+  +IHRD+   N+L   E   VK+ 
Sbjct: 150 PLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS-EPGLVKLG 196

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	135
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.98
3niz_A	311	Rhodanese family protein; structural genomics, str	99.98
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.98
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.98
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.98
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.98
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.98
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.98
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.98
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.98
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.98
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.97
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.97
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.97
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.97
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.97
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.97
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.97
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.97
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.97
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.97
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.97
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.97
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.97
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.97
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.97
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.97
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.97
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.97
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.97
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.97
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.97
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.97
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.97
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.97
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.97
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.97
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.97
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.97
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.97
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.97
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.97
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.97
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.97
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.97
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.97
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.97
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.97
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.97
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.97
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.97
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.97
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.97
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.97
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.97
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.97
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.97
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.97
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.97
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.97
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.97
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.97
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.97
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.97
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.97
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.97
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.97
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.97
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.97
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.97
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.97
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.97
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.97
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.97
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.97
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.97
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.97
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.97
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.97
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.97
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.97
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.97
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.97
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.97
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.97
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.97
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.96
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.96
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.96
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.96
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.96
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.96
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.96
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.96
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.96
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.96
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.96
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.96
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.96
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.96
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.96
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.96
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.96
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.96
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.96
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.96
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.96
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.96
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.96
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.96
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.96
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.96
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.96
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.96
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.96
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.96
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.96
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.96
3bhy_A	283	Death-associated protein kinase 3; death associate	99.96
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.96
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.96
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.96
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.96
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.96
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.96
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.96
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.96
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.96
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.96
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.96
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.96
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.96
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.96
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.96
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.96
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.96
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.96
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.96
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.96
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.96
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.96
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.96
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.96
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.96
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.96
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.96
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.96
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.96
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.96
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.96
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.96
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.96
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.96
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.96
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.96
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.96
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.96
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.96
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.96
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.96
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.96
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.96
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.96
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.96
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.96
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.96
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.96
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.96
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.96
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.96
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.96
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.96
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.96
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.96
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.96
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.96
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.96
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.96
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.96
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.96
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.96
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.96
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.96
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.96
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.96
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.96
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.96
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.96
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.96
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.96
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.96
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.96
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.96
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.96
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.96
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.96
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.95
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.95
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.95
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.95
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.95
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.95
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.95
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.95
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.95
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.95
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.95
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.95
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.95
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.95
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.95
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.95
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.95
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.94
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.94
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.91
3uqc_A	286	Probable conserved transmembrane protein; structur	99.9
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.85
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.72
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.51
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.23
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	98.58
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	98.32
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	98.31
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	97.78
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	97.75
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	97.46
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	97.37
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	97.23
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	96.2
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	95.3
3ats_A	357	Putative uncharacterized protein; hypothetical pro	93.63
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	93.35
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	93.14
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	92.86
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	92.16
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	91.03
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	89.32
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	88.98
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	88.06
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	86.99
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	85.69
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	85.21
4ano_A	219	ESSB; membrane protein, membrane secretion, ESS ty	84.61
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	84.47
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	84.39
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	83.94

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=9.8e-42  Score=224.07  Aligned_cols=130  Identities=31%  Similarity=0.501  Sum_probs=107.4

Q ss_pred             ccchhhhccceec-ceeEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      +||+++++++..+ ..|+||||++|+|.+++.+++++++..+..++.|++.|++|||++||+||||||+||+++ .++.+
T Consensus        73 pnIv~~~~~~~~~~~~~ivmEy~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~-~~~~v  151 (275)
T 3hyh_A           73 PHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLD-EHLNV  151 (275)
T ss_dssp             TTBCCEEEEEECSSEEEEEEECCCEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEEC-TTCCE
T ss_pred             CCCCeEEEEEEECCEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEEC-CCCCE
Confidence            4889999988554 889999999889999999989999999999999999999999999999999999999999 67889


Q ss_pred             EEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           81 KIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      |+ +|||+++..... ....+.+||+.|||||++.+..+.+.++|+||+||++|
T Consensus       152 kl-~DFGla~~~~~~-~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily  203 (275)
T 3hyh_A          152 KI-ADFGLSNIMTDG-NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILY  203 (275)
T ss_dssp             EE-CCSSCC----------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHH
T ss_pred             EE-eecCCCeecCCC-CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHH
Confidence            99 899999866443 34456789999999999998876678999999999998

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=7.8e-42  Score=227.51  Aligned_cols=130  Identities=23%  Similarity=0.389  Sum_probs=116.3

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .||+++++.+.++ +.|+|||||+ |+|.+++.+.+.+++..+..++.|++.|++|||+++|+||||||+||+++ .++.
T Consensus        92 pnIv~l~~~~~~~~~~yivmEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~-~~g~  170 (311)
T 4aw0_A           92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMH  170 (311)
T ss_dssp             TTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-TTSC
T ss_pred             CCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEc-CCCC
Confidence            4889999888555 8899999995 59999999989999999999999999999999999999999999999999 6789


Q ss_pred             eEEecccccccccCCC--CCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAP--FDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~--~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +|+ +|||+++.+...  .....+.+||+.|||||++.+.. ++.++|+||+||++|
T Consensus       171 vKl-~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~-y~~~~DiWSlGvily  225 (311)
T 4aw0_A          171 IQI-TDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKS-ACKSSDLWALGCIIY  225 (311)
T ss_dssp             EEE-CCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSC-BCHHHHHHHHHHHHH
T ss_pred             EEE-EEcCCceecCCCCCcccccCcccCcccCCHHHHcCCC-CCcHHHHHHHHHHHH
Confidence            999 899999876533  23456779999999999998876 788999999999998

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=1.1e-41  Score=226.54  Aligned_cols=130  Identities=21%  Similarity=0.263  Sum_probs=114.7

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .||+++++.+.++ ..|+|||||+ |+|.+++.+.+.+++..+..++.|++.||+|||++||+||||||+||+++ ..+.
T Consensus        86 pnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~-~~g~  164 (304)
T 3ubd_A           86 PFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLD-EEGH  164 (304)
T ss_dssp             TTEECEEEEEEETTEEEEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEEC-TTSC
T ss_pred             CCCCeEEEEEEECCEEEEEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEc-CCCC
Confidence            4889999988555 8999999995 69999999989999999999999999999999999999999999999999 6789


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +|+ +|||+++..........+.+||+.|||||++.+.. ++.++|+||+||++|
T Consensus       165 vKl-~DFGla~~~~~~~~~~~~~~GT~~YmAPE~~~~~~-y~~~~DiwSlGvily  217 (304)
T 3ubd_A          165 IKL-TDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRG-HTQSADWWSFGVLMF  217 (304)
T ss_dssp             EEE-ESSEEEEC-----CCCCSCCCCGGGCCHHHHHTSC-CCTHHHHHHHHHHHH
T ss_pred             EEe-cccccceeccCCCccccccccCcccCCHHHhccCC-CCCCCcccchHHHHH
Confidence            999 89999987665555666789999999999998876 788999999999998

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=3.9e-41  Score=226.99  Aligned_cols=129  Identities=17%  Similarity=0.339  Sum_probs=116.5

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|||++++.+..+ ..|+|||||+ |+|.+++.+ +++++..+..++.|++.||+|||++||+||||||+||+++ ..+.
T Consensus       131 pnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~-~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~-~~g~  208 (346)
T 4fih_A          131 ENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT-HDGR  208 (346)
T ss_dssp             TTBCCEEEEEEETTEEEEEECCCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC-TTCC
T ss_pred             CCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEC-CCCC
Confidence            4899999988555 8999999996 599999876 6799999999999999999999999999999999999999 6789


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +|+ +|||+++..........+.+||+.|||||++.+.. ++.++|+||+||++|
T Consensus       209 vKl-~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~-y~~~~DiWSlGvily  261 (346)
T 4fih_A          209 VKL-SDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLP-YGPEVDIWSLGIMVI  261 (346)
T ss_dssp             EEE-CCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCC-BCTHHHHHHHHHHHH
T ss_pred             EEE-ecCcCceecCCCCCcccccccCcCcCCHHHHCCCC-CCcHHHHHHHHHHHH
Confidence            999 89999998766656667789999999999998776 789999999999998

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=1e-40  Score=224.24  Aligned_cols=131  Identities=20%  Similarity=0.294  Sum_probs=112.2

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .||+++++++.++ ..|+|||||+ |+|.+++++.+.+++..+..++.|++.||+|||+++|+||||||+||+++.++..
T Consensus       110 pnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~  189 (336)
T 4g3f_A          110 PRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSR  189 (336)
T ss_dssp             TTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCC
T ss_pred             CCCCcEEEEEEECCEEEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCE
Confidence            4899999988655 7899999995 6999999998899999999999999999999999999999999999999954446


Q ss_pred             eEEecccccccccCCCCC-----CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFD-----AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~-----~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +|+ +|||+++.......     .....+||+.|||||++.+.+ ++.++|+||+||++|
T Consensus       190 vKl-~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~-y~~~~DiwSlGvily  247 (336)
T 4g3f_A          190 AAL-CDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP-CDAKVDIWSSCCMML  247 (336)
T ss_dssp             EEE-CCCTTCEEC------------CCCCCCGGGCCHHHHTTCC-CCTHHHHHHHHHHHH
T ss_pred             EEE-eeCCCCeEccCCCcccceecCCccccCccccCHHHHCCCC-CCcHHHHHHHHHHHH
Confidence            999 89999987643321     223467999999999998876 788999999999998

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=2.2e-40  Score=228.13  Aligned_cols=129  Identities=17%  Similarity=0.339  Sum_probs=116.3

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|||++++.+..+ ..|+|||||+ |+|.++++. +++++..+..++.|++.||+|||++||+||||||+||+++ ..+.
T Consensus       208 pnIV~l~~~~~~~~~~~iVmEy~~gG~L~~~i~~-~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~-~~g~  285 (423)
T 4fie_A          208 ENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT-HDGR  285 (423)
T ss_dssp             TTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEEC-TTCC
T ss_pred             CCCCceEEEEEECCEEEEEEeCCCCCcHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEc-CCCC
Confidence            4899999988555 8999999996 599999876 6799999999999999999999999999999999999999 6789


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +|+ +|||+++............+||+.|||||++.+.. ++.++|+|||||++|
T Consensus       286 vKl-~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~-y~~~~DiWSlGvily  338 (423)
T 4fie_A          286 VKL-SDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLP-YGPEVDIWSLGIMVI  338 (423)
T ss_dssp             EEE-CCCTTCEECCSSCCCBCCCEECTTTCCHHHHTTCC-BCTHHHHHHHHHHHH
T ss_pred             EEE-ecCccceECCCCCccccccccCcCcCCHHHHCCCC-CCcHHHHHHHHHHHH
Confidence            999 89999998766655667789999999999998776 789999999999998

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=5.4e-41  Score=226.58  Aligned_cols=130  Identities=21%  Similarity=0.347  Sum_probs=113.7

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQY--HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN   77 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~   77 (135)
                      .||+++++++.++ ..|+|||||+ |+|.+++...  ..+++..+..++.|++.||+|||++||+||||||+||+++ ..
T Consensus        83 pnIV~~~~~~~~~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~-~~  161 (350)
T 4b9d_A           83 PNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLT-KD  161 (350)
T ss_dssp             TTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEEC-TT
T ss_pred             CCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEEC-CC
Confidence            4899999988655 8899999995 6999999753  4578999999999999999999999999999999999999 67


Q ss_pred             CeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           78 KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +.+|+ +|||+++............+||+.|||||++.+.. ++.++|+|||||++|
T Consensus       162 g~vKl-~DFGla~~~~~~~~~~~~~~GT~~YmAPE~l~~~~-y~~~~DiwSlGvily  216 (350)
T 4b9d_A          162 GTVQL-GDFGIARVLNSTVELARACIGTPYYLSPEICENKP-YNNKSDIWALGCVLY  216 (350)
T ss_dssp             CCEEE-CSTTEESCCCHHHHHHHHHHSCCTTCCHHHHTTCC-CCHHHHHHHHHHHHH
T ss_pred             CCEEE-cccccceeecCCcccccccCCCccccCHHHHCCCC-CCcHHHHHHHHHHHH
Confidence            88999 89999987654433345568999999999998876 788999999999998

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=1.9e-39  Score=214.75  Aligned_cols=128  Identities=23%  Similarity=0.377  Sum_probs=111.8

Q ss_pred             ccchhhhcccee-----cceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCC--cccCCCCCcceee
Q 043346            2 QEMMKSMSLWVH-----KRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARK--IIHRDLTTMNLLA   73 (135)
Q Consensus         2 ~~~~~~~~~~~~-----~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~--i~h~dl~~~nil~   73 (135)
                      +|||++++++..     +..|+|||||+ |+|.+++.+.+.+++..+..++.|++.||+|||+++  |+||||||+||++
T Consensus        85 pnIV~~~~~~~~~~~~~~~~~lvmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl  164 (290)
T 3fpq_A           85 PNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFI  164 (290)
T ss_dssp             TTBCCEEEEEEEEETTEEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEE
T ss_pred             CCCCcEEEEEeeccCCCcEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeE
Confidence            489999988743     35799999995 699999999889999999999999999999999998  9999999999999


Q ss_pred             ecCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           74 DIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        74 ~~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +..++.+|+ +|||+++....  ....+.+||+.|||||++.+.  ++.++|+|||||++|
T Consensus       165 ~~~~g~vKl-~DFGla~~~~~--~~~~~~~GTp~YmAPE~~~~~--y~~~~DiwSlGvily  220 (290)
T 3fpq_A          165 TGPTGSVKI-GDLGLATLKRA--SFAKAVIGTPEFMAPEMYEEK--YDESVDVYAFGMCML  220 (290)
T ss_dssp             SSTTSCEEE-CCTTGGGGCCT--TSBEESCSSCCCCCGGGGGTC--CCTHHHHHHHHHHHH
T ss_pred             ECCCCCEEE-EeCcCCEeCCC--CccCCcccCccccCHHHcCCC--CCcHHHHHHHHHHHH
Confidence            855789999 89999975433  334567899999999998753  788999999999998

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=2.2e-39  Score=215.75  Aligned_cols=131  Identities=20%  Similarity=0.246  Sum_probs=110.0

Q ss_pred             ccchhhhccceecceeEEEeccC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHKRENLVFEYVN-INLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      +||++++++++++..++|||||+ |+|.+++.. .+++++..+..++.|++.||.|||+++|+||||||+||+++ +++.
T Consensus        92 pNIV~l~g~~~~~~~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~-~~~~  170 (307)
T 3omv_A           92 VNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLH-EGLT  170 (307)
T ss_dssp             TTBCCEEEEECSSSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEE-TTEE
T ss_pred             CCEeeEEEEEECCeEEEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEEC-CCCc
Confidence            58999999998889999999995 799999976 46799999999999999999999999999999999999999 7789


Q ss_pred             eEEecccccccccCCC--CCCCCCCcccccccCcccccCC--CCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAP--FDAHTTEMVILRYRAPKILFGR--TNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~--~~~~~~~~~~~~~~ape~~~~~--~~~~~~~D~wslg~il~  134 (135)
                      +|+ +|||+++.....  ........||+.|||||++.+.  ..++.++|+|||||++|
T Consensus       171 ~Ki-~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~  228 (307)
T 3omv_A          171 VKI-GDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLY  228 (307)
T ss_dssp             EEE-CCCSSCBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHH
T ss_pred             EEE-eeccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHH
Confidence            999 899999866432  2234556899999999999643  23788999999999997

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=2.9e-38  Score=226.77  Aligned_cols=129  Identities=20%  Similarity=0.286  Sum_probs=114.9

Q ss_pred             ccchhhhcccee-cceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVH-KRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~-~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .||+++++.+.. ++.|+||||++ |+|.+++.+.+.+++..+..++.||+.||+|||++||+||||||+||+++ ..+.
T Consensus       252 P~IV~l~~~f~~~~~lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld-~~G~  330 (689)
T 3v5w_A          252 PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD-EHGH  330 (689)
T ss_dssp             TTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEEC-TTSC
T ss_pred             CCEeEEEEEEEECCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEe-CCCC
Confidence            478888887754 48999999995 69999999989999999999999999999999999999999999999999 7789


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +|+ +|||++......  ...+.+||+.|||||++.++..++.++|+|||||++|
T Consensus       331 vKL-~DFGlA~~~~~~--~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilY  382 (689)
T 3v5w_A          331 VRI-SDLGLACDFSKK--KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLF  382 (689)
T ss_dssp             EEE-CCCTTCEECSSC--CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHH
T ss_pred             EEe-cccceeeecCCC--CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHH
Confidence            999 899999876543  3456789999999999976555889999999999998

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=1.2e-38  Score=211.95  Aligned_cols=130  Identities=18%  Similarity=0.381  Sum_probs=102.3

Q ss_pred             ccchhhhccceec-------------ceeEEEeccC-CCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHhhCCcccC
Q 043346            2 QEMMKSMSLWVHK-------------RENLVFEYVN-INLHKFIQQYHP---MDSHLIKKFLYCILSGISYCHARKIIHR   64 (135)
Q Consensus         2 ~~~~~~~~~~~~~-------------~~~lv~e~~~-~~L~~~~~~~~~---~~~~~~~~~~~~i~~~l~~lh~~~i~h~   64 (135)
                      +||+++++.+.+.             ..|++||||+ |+|.+++.....   .+...+..++.|++.|++|||++||+||
T Consensus        63 pnIV~~~~~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHR  142 (299)
T 4g31_A           63 PGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHR  142 (299)
T ss_dssp             TTBCCEEEEEEEEC----------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred             CCCCeEEEEEEecCccccccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccc
Confidence            4788998887543             2689999995 699999987543   3456788999999999999999999999


Q ss_pred             CCCCcceeeecCCCeeEEecccccccccCCCCC------------CCCCCcccccccCcccccCCCCCCchhHHHHhhhh
Q 043346           65 DLTTMNLLADIENKTVKIAADSGMAKEIDAPFD------------AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYL  132 (135)
Q Consensus        65 dl~~~nil~~~~~~~~~i~~d~~~~~~~~~~~~------------~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~i  132 (135)
                      ||||+||+++ .++.+|+ +|||+++.......            .....+||+.|||||++.+.. ++.++|+|||||+
T Consensus       143 DlKp~NILl~-~~~~vKl-~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~-y~~~~DiwSlGvi  219 (299)
T 4g31_A          143 DLKPSNIFFT-MDDVVKV-GDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNS-YSHKVDIFSLGLI  219 (299)
T ss_dssp             CCCGGGEEEC-TTCCEEE-CCCCCC--------------------------CCCTTSCHHHHTTCC-CCTHHHHHHHHHH
T ss_pred             cCcHHHeEEC-CCCcEEE-ccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCC-CCCHHHHHHHHHH
Confidence            9999999999 6788999 89999987643321            223467999999999998876 7899999999999


Q ss_pred             hh
Q 043346          133 LR  134 (135)
Q Consensus       133 l~  134 (135)
                      +|
T Consensus       220 ly  221 (299)
T 4g31_A          220 LF  221 (299)
T ss_dssp             HH
T ss_pred             HH
Confidence            97

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=3.9e-38  Score=216.38  Aligned_cols=131  Identities=30%  Similarity=0.533  Sum_probs=113.9

Q ss_pred             ccchhhhccce-------ecceeEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeee
Q 043346            2 QEMMKSMSLWV-------HKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD   74 (135)
Q Consensus         2 ~~~~~~~~~~~-------~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~   74 (135)
                      .||+++++++.       .++.|+|||||+|+|.+++.+++++++..+..++.|++.||+|||++||+||||||+||+++
T Consensus       113 pnIv~l~~~~~~~~~~~~~~~~~ivmE~~~g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~  192 (398)
T 4b99_A          113 DNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVN  192 (398)
T ss_dssp             TTBCCEEEECCCSSCTTTCCCEEEEEECCSEEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC
T ss_pred             CCcceEeeeeecccccccCCEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccC
Confidence            47788877653       24789999999999999999888999999999999999999999999999999999999999


Q ss_pred             cCCCeeEEecccccccccCCC----CCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           75 IENKTVKIAADSGMAKEIDAP----FDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        75 ~~~~~~~i~~d~~~~~~~~~~----~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                       ..+.+|+ +|||+++.+...    .....+.+||+.|+|||++.+..+++.++|+||+||++|
T Consensus       193 -~~~~~Ki-~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~  254 (398)
T 4b99_A          193 -ENCELKI-GDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFG  254 (398)
T ss_dssp             -TTCCEEE-CCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHH
T ss_pred             -CCCCEEE-eecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHH
Confidence             7789999 899999876432    223456799999999999988776899999999999997

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=2.1e-38  Score=210.75  Aligned_cols=130  Identities=26%  Similarity=0.424  Sum_probs=112.5

Q ss_pred             ccchhhhccceec-ceeEEEecc-CCCHHHHHHhc-------------CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYV-NINLHKFIQQY-------------HPMDSHLIKKFLYCILSGISYCHARKIIHRDL   66 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~-~~~L~~~~~~~-------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl   66 (135)
                      +||+++++++.++ ..++||||| +|+|.+++.+.             ..+++..+..++.|++.||.|||+++|+||||
T Consensus        75 pnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDl  154 (299)
T 4asz_A           75 EHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDL  154 (299)
T ss_dssp             TTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCCccEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCcc
Confidence            5899999998655 789999999 57999999763             36899999999999999999999999999999


Q ss_pred             CCcceeeecCCCeeEEecccccccccCCCCC--CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           67 TTMNLLADIENKTVKIAADSGMAKEIDAPFD--AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        67 ~~~nil~~~~~~~~~i~~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ||+||+++ .++.+|+ +|||+++.......  ......+|+.|||||++.+.. ++.++|+|||||++|
T Consensus       155 Kp~NILl~-~~~~~Ki-~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~-~~~k~DVwS~Gvvl~  221 (299)
T 4asz_A          155 ATRNCLVG-ENLLVKI-GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRK-FTTESDVWSLGVVLW  221 (299)
T ss_dssp             SGGGEEEC-GGGCEEE-CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCC-CCHHHHHHHHHHHHH
T ss_pred             CHhhEEEC-CCCcEEE-CCcccceecCCCCceeecCceecChhhcCHHHHcCCC-CCchhhHHHHHHHHH
Confidence            99999999 6789999 89999986643322  233456899999999998776 789999999999997

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=1.4e-37  Score=209.10  Aligned_cols=130  Identities=24%  Similarity=0.407  Sum_probs=105.7

Q ss_pred             ccchhhhccceec-ceeEEEecc-CCCHHHHHHhc---------------CCCCHHHHHHHHHHHHHHHHHHhhCCcccC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYV-NINLHKFIQQY---------------HPMDSHLIKKFLYCILSGISYCHARKIIHR   64 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~-~~~L~~~~~~~---------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~   64 (135)
                      +|||++++++.++ ..++||||| +|+|.+++.+.               +++++.++..++.|++.||.|||+++|+||
T Consensus       103 pnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHR  182 (329)
T 4aoj_A          103 QHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHR  182 (329)
T ss_dssp             TTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred             CCCCcEEEEEEECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecc
Confidence            5899999998665 789999999 57999999753               358899999999999999999999999999


Q ss_pred             CCCCcceeeecCCCeeEEecccccccccCCCC--CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           65 DLTTMNLLADIENKTVKIAADSGMAKEIDAPF--DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        65 dl~~~nil~~~~~~~~~i~~d~~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ||||+||+++ .++.+|+ +|||+++......  .......||+.|||||++.+.. ++.++|+|||||++|
T Consensus       183 DLKp~NILl~-~~~~~Ki-~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~-~~~~sDvwS~Gvvl~  251 (329)
T 4aoj_A          183 DLATRNCLVG-QGLVVKI-GDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRK-FTTESDVWSFGVVLW  251 (329)
T ss_dssp             CCCGGGEEEE-TTTEEEE-CCCC----------------CCCCGGGCCHHHHTTCC-CCHHHHHHHHHHHHH
T ss_pred             cccHhhEEEC-CCCcEEE-cccccceeccCCCcceecCcccccccccChhhhcCCC-CCccccccchHHHHH
Confidence            9999999999 7799999 8999998664332  2334567899999999998876 789999999999997

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=2.7e-37  Score=210.10  Aligned_cols=129  Identities=18%  Similarity=0.319  Sum_probs=109.2

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .||+++++.+.++ +.|+||||++ ++|.+++.   .+++.++..++.|++.|++|||++||+||||||+||+++.+.+.
T Consensus        80 ~nIv~l~~~~~~~~~~~lvmE~~~g~~L~~~~~---~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~  156 (361)
T 4f9c_A           80 DNVMGVKYCFRKNDHVVIAMPYLEHESFLDILN---SLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKK  156 (361)
T ss_dssp             TTBCCCSEEEEETTEEEEEEECCCCCCHHHHHT---TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTE
T ss_pred             CCCceEEEEEEECCEEEEEEeCCCcccHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCe
Confidence            4788998888555 8899999995 69999884   58999999999999999999999999999999999999966689


Q ss_pred             eEEecccccccccCCCC----------------------------CCCCCCcccccccCcccccCCCCCCchhHHHHhhh
Q 043346           80 VKIAADSGMAKEIDAPF----------------------------DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLY  131 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~----------------------------~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~  131 (135)
                      +|+ +|||+++......                            ....+.+||+.|+|||++.+.+.++.++|+||+||
T Consensus       157 ~kl-~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~  235 (361)
T 4f9c_A          157 YAL-VDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGV  235 (361)
T ss_dssp             EEE-CCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHH
T ss_pred             EEE-CcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHH
Confidence            999 8999997553321                            11234679999999999988777889999999999


Q ss_pred             hhh
Q 043346          132 LLR  134 (135)
Q Consensus       132 il~  134 (135)
                      ++|
T Consensus       236 il~  238 (361)
T 4f9c_A          236 IFL  238 (361)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            998

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=1.2e-37  Score=207.88  Aligned_cols=130  Identities=21%  Similarity=0.411  Sum_probs=112.6

Q ss_pred             ccchhhhccceec-ceeEEEecc-CCCHHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHhhCCccc
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYV-NINLHKFIQQY----------------HPMDSHLIKKFLYCILSGISYCHARKIIH   63 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~-~~~L~~~~~~~----------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h   63 (135)
                      +|||++++++.++ ..++||||| +|+|.+++...                ..+++..+..++.|++.||.|||+++++|
T Consensus        89 pNIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiH  168 (308)
T 4gt4_A           89 PNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVH  168 (308)
T ss_dssp             TTBCCEEEEECSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             CCCCCcceEEEECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence            5899999998655 789999999 57999999642                35889999999999999999999999999


Q ss_pred             CCCCCcceeeecCCCeeEEecccccccccCCC--CCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           64 RDLTTMNLLADIENKTVKIAADSGMAKEIDAP--FDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        64 ~dl~~~nil~~~~~~~~~i~~d~~~~~~~~~~--~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      |||||+||+++ +++.+|+ +|||+++.....  ........||+.|||||++.+.. ++.++|||||||++|
T Consensus       169 RDLK~~NILl~-~~~~~Ki-~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~-~s~ksDVwSfGvvl~  238 (308)
T 4gt4_A          169 KDLATRNVLVY-DKLNVKI-SDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGK-FSIDSDIWSYGVVLW  238 (308)
T ss_dssp             SCCSGGGEEEC-GGGCEEE-CCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCC-CCHHHHHHHHHHHHH
T ss_pred             CCccccceEEC-CCCCEEE-CCcccceeccCCCceeEecccccCCcccCHHHHhCCC-CCccchhhhHHHHHH
Confidence            99999999999 7789999 899999866432  22344568899999999998776 789999999999997

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=2.3e-37  Score=209.65  Aligned_cols=130  Identities=24%  Similarity=0.411  Sum_probs=111.3

Q ss_pred             ccchhhhccceec--ceeEEEeccC-CCHHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHhhCCcc
Q 043346            2 QEMMKSMSLWVHK--RENLVFEYVN-INLHKFIQQY----------------HPMDSHLIKKFLYCILSGISYCHARKII   62 (135)
Q Consensus         2 ~~~~~~~~~~~~~--~~~lv~e~~~-~~L~~~~~~~----------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~   62 (135)
                      .|||++++++.+.  ..++|||||+ |+|.+++++.                ..+++..+..++.|++.||+|||+++++
T Consensus       128 pnIV~l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~ii  207 (353)
T 4ase_A          128 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI  207 (353)
T ss_dssp             TTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             CcEEEEEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCee
Confidence            3799999987543  5799999995 6999999752                2478999999999999999999999999


Q ss_pred             cCCCCCcceeeecCCCeeEEecccccccccCCCCC--CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           63 HRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFD--AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        63 h~dl~~~nil~~~~~~~~~i~~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ||||||+||+++ +++.+|+ +|||+++.......  ......+|+.|||||++.+.. ++.++|||||||++|
T Consensus       208 HRDLK~~NILl~-~~~~vKi-~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~-y~~ksDVwS~Gv~l~  278 (353)
T 4ase_A          208 HRDLAARNILLS-EKNVVKI-CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLW  278 (353)
T ss_dssp             CSCCSGGGEEEC-GGGCEEE-CCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCC-CCHHHHHHHHHHHHH
T ss_pred             cCccCccceeeC-CCCCEEE-CcchhhhhcccCCCceeeccccccccccCHHHHhcCC-CCCcccEeehHHHHH
Confidence            999999999999 6789999 89999987644322  334567899999999998776 789999999999997

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=1.9e-36  Score=201.91  Aligned_cols=130  Identities=25%  Similarity=0.350  Sum_probs=106.9

Q ss_pred             ccchhhhccceec-----ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhC--------CcccCCCC
Q 043346            2 QEMMKSMSLWVHK-----RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHAR--------KIIHRDLT   67 (135)
Q Consensus         2 ~~~~~~~~~~~~~-----~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~--------~i~h~dl~   67 (135)
                      +||+++++++.++     ..|+||||++ |+|.+++++ .+++++....++.|++.||.|||++        +|+|||||
T Consensus        57 pNIv~l~g~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~-~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlK  135 (303)
T 3hmm_A           57 ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR-YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLK  135 (303)
T ss_dssp             TTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCC
T ss_pred             CCCCcEEEEEEecCCCceEEEEEecCCCCCcHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCC
Confidence            5899999888643     4689999995 799999987 5689999999999999999999987        99999999


Q ss_pred             CcceeeecCCCeeEEecccccccccCCCCC----CCCCCcccccccCcccccCCC-----CCCchhHHHHhhhhhh
Q 043346           68 TMNLLADIENKTVKIAADSGMAKEIDAPFD----AHTTEMVILRYRAPKILFGRT-----NCFAAIDMWAVLYLLR  134 (135)
Q Consensus        68 ~~nil~~~~~~~~~i~~d~~~~~~~~~~~~----~~~~~~~~~~~~ape~~~~~~-----~~~~~~D~wslg~il~  134 (135)
                      |+||+++ .++.+|+ +|||+++.......    ......||+.|||||++.+..     .++.++|+|||||++|
T Consensus       136 p~NILl~-~~~~~Ki-~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~  209 (303)
T 3hmm_A          136 SKNILVK-KNGTCCI-ADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFW  209 (303)
T ss_dssp             GGGEEEC-TTSCEEE-CCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHH
T ss_pred             cccEEEC-CCCCEEE-EeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHH
Confidence            9999999 7789999 89999987644322    223457999999999997643     1456899999999997

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=3.3e-35  Score=209.76  Aligned_cols=130  Identities=16%  Similarity=0.311  Sum_probs=113.3

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecC-C
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE-N   77 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~-~   77 (135)
                      .||+++++.+.++ ..|+|||||+ |+|.+++.+ .+.+++..+..++.|++.||+|||+++|+||||||+||+++.+ .
T Consensus       214 pnIv~l~~~~~~~~~~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~  293 (573)
T 3uto_A          214 PTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRS  293 (573)
T ss_dssp             TTBCCEEEEEECSSEEEEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSC
T ss_pred             CCCCeEEEEEEECCEEEEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCC
Confidence            4789998888655 8899999995 699999964 4689999999999999999999999999999999999999843 4


Q ss_pred             CeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           78 KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +.+|+ +|||+++.+... ......+||+.|||||++.+.. ++.++|+||+||++|
T Consensus       294 ~~vKl-~DFG~a~~~~~~-~~~~~~~GT~~y~APEv~~~~~-y~~~~DiWSlGvily  347 (573)
T 3uto_A          294 NELKL-IDFGLTAHLDPK-QSVKVTTGTAEFAAPEVAEGKP-VGYYTDMWSVGVLSY  347 (573)
T ss_dssp             CCEEE-CCCSSCEECCTT-SEEEEECSSGGGCCHHHHTTCC-BCHHHHHHHHHHHHH
T ss_pred             CCEEE-eeccceeEccCC-CceeeeEECccccCHHHhCCCC-CCcHHHHHHHHHHHH
Confidence            78999 899999877544 3345568999999999998876 788999999999997

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=1.1e-33  Score=194.43  Aligned_cols=130  Identities=31%  Similarity=0.353  Sum_probs=115.5

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++++.+..+ ..|+||||++ ++|.+++.+.+.+++..+..++.|++.|++|||+++++||||||+||+++ ..+.
T Consensus       113 p~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~-~~g~  191 (396)
T 4dc2_A          113 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD-SEGH  191 (396)
T ss_dssp             TTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC-TTSC
T ss_pred             CCcCeeEEEEEECCEEEEEEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEC-CCCC
Confidence            4678888877544 7899999995 69999999888999999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +++ +|||+++............+||+.|+|||++.+.. ++.++|+|||||++|
T Consensus       192 ikL-~DFGla~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~-~~~~~DiwslGvlly  244 (396)
T 4dc2_A          192 IKL-TDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGED-YGFSVDWWALGVLMF  244 (396)
T ss_dssp             EEE-CCCTTCBCCCCTTCCBCCCCBCGGGCCHHHHTTCC-BCTHHHHHHHHHHHH
T ss_pred             EEE-eecceeeecccCCCccccccCCcccCCchhhcCCC-CChHHHHHHHHHHHH
Confidence            999 89999986555545566788999999999998876 788999999999997

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=6.4e-34  Score=193.19  Aligned_cols=130  Identities=30%  Similarity=0.306  Sum_probs=109.2

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .+++++++.+... ..|+||||++ ++|.+++.+.+.+++..+..++.|++.|++|||++|++||||||+||+++ ..+.
T Consensus        84 p~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~-~~g~  162 (353)
T 3txo_A           84 PFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLD-HEGH  162 (353)
T ss_dssp             TTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC-TTSC
T ss_pred             CceeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEEC-CCCC
Confidence            3678888877554 8899999995 69999999888999999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +++ +|||++.............+||+.|+|||++.+.. ++.++|+|||||++|
T Consensus       163 ikL-~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~  215 (353)
T 3txo_A          163 CKL-ADFGMCKEGICNGVTTATFCGTPDYIAPEILQEML-YGPAVDWWAMGVLLY  215 (353)
T ss_dssp             EEE-CCCTTCBCSCC---------CCGGGCCHHHHHHHH-CTTHHHHHHHHHHHH
T ss_pred             EEE-ccccceeecccCCccccccCCCcCeEChhhcCCCC-cCCccCCCcchHHHH
Confidence            999 89999986555445556778999999999998776 788999999999997

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=3.9e-33  Score=188.29  Aligned_cols=130  Identities=23%  Similarity=0.286  Sum_probs=113.8

Q ss_pred             ccchhhhcccee-cceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVH-KRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~-~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .+++++++.+.. +..|+||||++ ++|.+++.+.+.+++..+..++.|++.|++|||++|++||||||+||+++ ..+.
T Consensus        65 p~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~-~~g~  143 (337)
T 1o6l_A           65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD-KDGH  143 (337)
T ss_dssp             TTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC-TTSC
T ss_pred             CcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEEC-CCCC
Confidence            367777777754 48899999995 59999999888999999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +++ +|||++..............||+.|+|||++.+.. ++.++|+||||+++|
T Consensus       144 vkL-~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~  196 (337)
T 1o6l_A          144 IKI-TDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDND-YGRAVDWWGLGVVMY  196 (337)
T ss_dssp             EEE-CCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSSC-BCTTHHHHHHHHHHH
T ss_pred             EEE-eeccchhhcccCCCcccccccChhhCChhhhcCCC-CCchhhcccchhHHH
Confidence            999 89999986554444556778999999999998766 788999999999997

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=3.2e-33  Score=189.27  Aligned_cols=130  Identities=30%  Similarity=0.384  Sum_probs=114.1

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .+++++++.+..+ ..|+||||++ ++|.+++.+.+.+++..+..++.|++.|++|||++|++||||||+||+++ ..+.
T Consensus        78 p~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~-~~g~  156 (345)
T 1xjd_A           78 PFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLD-KDGH  156 (345)
T ss_dssp             TTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC-TTSC
T ss_pred             CCCCcEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEEC-CCCC
Confidence            3677887777544 8899999995 69999999888999999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +++ +|||+++.............||+.|+|||++.+.. ++.++|+||||+++|
T Consensus       157 vkL-~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~  209 (345)
T 1xjd_A          157 IKI-ADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQK-YNHSVDWWSFGVLLY  209 (345)
T ss_dssp             EEE-CCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCC-BCTHHHHHHHHHHHH
T ss_pred             EEE-eEChhhhhcccCCCcccCCCCCcccCChhhhcCCC-CCChhhhHHHHHHHH
Confidence            999 89999986544444556778999999999998776 788999999999997

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=4.3e-33  Score=189.11  Aligned_cols=129  Identities=29%  Similarity=0.278  Sum_probs=113.2

Q ss_pred             cchhhhcccee-cceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            3 EMMKSMSLWVH-KRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         3 ~~~~~~~~~~~-~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      +++++...+.. +..|+||||++ ++|.+++.+.+.+++..+..++.|++.|++|||++|++||||||+||+++ ..+.+
T Consensus        82 ~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~-~~g~v  160 (353)
T 2i0e_A           82 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLD-SEGHI  160 (353)
T ss_dssp             TBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC-TTSCE
T ss_pred             EEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEc-CCCcE
Confidence            56777776654 48899999995 69999999888999999999999999999999999999999999999999 67889


Q ss_pred             EEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           81 KIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ++ +|||++..............||+.|+|||++.+.. ++.++|+||||+++|
T Consensus       161 kL-~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~  212 (353)
T 2i0e_A          161 KI-ADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQP-YGKSVDWWAFGVLLY  212 (353)
T ss_dssp             EE-CCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCC-BSTHHHHHHHHHHHH
T ss_pred             EE-EeCCcccccccCCcccccccCCccccChhhhcCCC-cCCcccccchHHHHH
Confidence            99 89999986554444556778999999999998766 788999999999997

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=5.4e-33  Score=189.83  Aligned_cols=131  Identities=21%  Similarity=0.260  Sum_probs=114.6

Q ss_pred             ccchhhhcccee-cceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVH-KRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~-~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|+++++..+.. +..|+||||++ ++|.+++.+.+.+++..+..++.|++.|++|||++|++||||||+||+++ ..+.
T Consensus        99 p~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~-~~g~  177 (373)
T 2r5t_A           99 PFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLD-SQGH  177 (373)
T ss_dssp             TTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC-TTSC
T ss_pred             CCCCCEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEC-CCCC
Confidence            367777777754 48899999995 69999999888899999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||+++.............||+.|+|||++.+.. ++.++|+||||+++|.
T Consensus       178 ikL-~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~e  231 (373)
T 2r5t_A          178 IVL-TDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQP-YDRTVDWWCLGAVLYE  231 (373)
T ss_dssp             EEE-CCCCBCGGGBCCCCCCCSBSCCCCCCCHHHHTTCC-CCTHHHHHHHHHHHHH
T ss_pred             EEE-eeCccccccccCCCccccccCCccccCHHHhCCCC-CCchhhhHHHHHHHHH
Confidence            999 89999987555445566778999999999998776 7889999999999973

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=4.9e-33  Score=188.35  Aligned_cols=130  Identities=31%  Similarity=0.350  Sum_probs=114.5

Q ss_pred             ccchhhhcccee-cceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVH-KRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~-~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++++.+.. +..|+|||+++ ++|.+++.+.+.+++..+..++.|++.|++|||+++++||||||+||+++ ..+.
T Consensus        70 p~iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~-~~g~  148 (345)
T 3a8x_A           70 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD-SEGH  148 (345)
T ss_dssp             TTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC-TTSC
T ss_pred             CccCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEC-CCCC
Confidence            467888887754 48899999995 69999999888999999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +++ +|||+++.............||+.|+|||++.+.. ++.++|+|||||++|
T Consensus       149 ~kL-~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~  201 (345)
T 3a8x_A          149 IKL-TDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGED-YGFSVDWWALGVLMF  201 (345)
T ss_dssp             EEE-CCGGGCBCSCCTTCCBCCCCSCGGGCCHHHHTTCC-BCTHHHHHHHHHHHH
T ss_pred             EEE-EeccccccccCCCCcccccCCCccccCccccCCCC-CChHHhHHHHHHHHH
Confidence            999 89999986544444556678999999999998766 788999999999997

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=5.4e-33  Score=187.02  Aligned_cols=130  Identities=25%  Similarity=0.431  Sum_probs=114.5

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++++++... ..|+|||+++ ++|.+++.+.+.+++..+..++.|++.|++|||+++++||||||+||+++ .++.
T Consensus        74 pnIv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~-~~~~  152 (328)
T 3fe3_A           74 PNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLD-ADMN  152 (328)
T ss_dssp             TTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC-TTSC
T ss_pred             CCEeeEEEEEEECCEEEEEEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEc-CCCC
Confidence            4788888888554 8899999994 69999999888999999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +++ +|||++...... .......+|+.|+|||++.+....++++|+||+||++|
T Consensus       153 ~kl-~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~  205 (328)
T 3fe3_A          153 IKI-ADFGFSNEFTVG-GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILY  205 (328)
T ss_dssp             EEE-CSTTCCGGGSSS-CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHH
T ss_pred             EEE-eeccCceecCCC-CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHH
Confidence            999 899999866543 33456689999999999988875668999999999987

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=7e-33  Score=187.01  Aligned_cols=130  Identities=29%  Similarity=0.473  Sum_probs=114.7

Q ss_pred             ccchhhhccceec-ceeEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      .|++++++++..+ ..++||||++|+|.+++.+.+.+++..+..++.|++.|+.|||++|++||||||+||+++ ..+.+
T Consensus        69 pnIv~l~~~~~~~~~~~lv~E~~~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~-~~~~~  147 (336)
T 3h4j_B           69 PHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLD-DNLNV  147 (336)
T ss_dssp             TTBCCEEEEEECSSEEEEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEEC-TTCCE
T ss_pred             CCCCeEEEEEEeCCEEEEEEECCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEc-CCCCE
Confidence            4788888888554 789999999889999998888999999999999999999999999999999999999999 77889


Q ss_pred             EEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           81 KIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ++ +|||++...... .......||+.|+|||++.+....++++|+||+|+++|
T Consensus       148 kl-~DFG~s~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~  199 (336)
T 3h4j_B          148 KI-ADFGLSNIMTDG-NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLY  199 (336)
T ss_dssp             EE-CCSSCTBTTTTS-BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHH
T ss_pred             EE-EEeccceeccCC-cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHH
Confidence            99 899999866544 33455679999999999988775578999999999997

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=1.7e-32  Score=181.58  Aligned_cols=131  Identities=31%  Similarity=0.682  Sum_probs=115.6

Q ss_pred             ccchhhhccceec-ceeEEEeccCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNINLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      +|++++++++.++ ..++|||++++++.+.+.. ++.+++..+..++.|++.|++|||++|++|+||||+||+++ .++.
T Consensus        61 ~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~-~~~~  139 (292)
T 3o0g_A           61 KNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLIN-RNGE  139 (292)
T ss_dssp             TTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC-TTSC
T ss_pred             CCEeeEEeEEEeCCEEEEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc-CCCC
Confidence            4788888888555 7899999999888887765 57899999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +++ +|||++.....+........+|+.|+|||++.+...++.++|+||+|+++|
T Consensus       140 ~kl-~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~  193 (292)
T 3o0g_A          140 LKL-ANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFA  193 (292)
T ss_dssp             EEE-CCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHH
T ss_pred             EEE-eecccceecCCccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHH
Confidence            999 899999887666556667788999999999987766789999999999987

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=2.8e-32  Score=189.85  Aligned_cols=131  Identities=23%  Similarity=0.307  Sum_probs=115.5

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeec--CC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI--EN   77 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~--~~   77 (135)
                      .||+++++++.++ ..|+|||++. ++|.+++...+.+++..+..++.|++.|+.|||++|++||||||+||+++.  .+
T Consensus        70 pnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~  149 (444)
T 3soa_A           70 PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKG  149 (444)
T ss_dssp             TTBCCEEEEEECSSEEEEEECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTT
T ss_pred             cCCCeEEEEEEECCEEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCC
Confidence            4788888888655 7899999995 699999998889999999999999999999999999999999999999984  34


Q ss_pred             CeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           78 KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +.+++ +|||++..............||+.|+|||++.+.. ++.++|+||+|+++|
T Consensus       150 ~~vkL-~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~-~~~~~DIwSlGvily  204 (444)
T 3soa_A          150 AAVKL-ADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDP-YGKPVDLWACGVILY  204 (444)
T ss_dssp             CCEEE-CCCSSCBCCCTTCCBCCCSCSCGGGCCHHHHTTCC-BCTHHHHHHHHHHHH
T ss_pred             CcEEE-ccCceeEEecCCCceeecccCCcccCCHHHhcCCC-CCCccccHHHHHHHH
Confidence            67899 89999987766555556678999999999998765 788999999999997

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=100.00  E-value=1.4e-32  Score=187.08  Aligned_cols=132  Identities=20%  Similarity=0.182  Sum_probs=111.0

Q ss_pred             ccchhhhcccee-cceeEEEeccC-CCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeee
Q 043346            2 QEMMKSMSLWVH-KRENLVFEYVN-INLHKFIQQ-----YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD   74 (135)
Q Consensus         2 ~~~~~~~~~~~~-~~~~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~   74 (135)
                      .|++++++.+.. +..++||||++ ++|.+++..     ...+++..+..++.|++.||+|||+++++||||||+||+++
T Consensus       127 ~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~  206 (365)
T 3e7e_A          127 HMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILG  206 (365)
T ss_dssp             GGBCCEEEEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEEC
T ss_pred             hhhhhhheeeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEec
Confidence            467777777744 48899999995 799999974     45799999999999999999999999999999999999998


Q ss_pred             cC----------CCeeEEecccccccccC--CCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           75 IE----------NKTVKIAADSGMAKEID--APFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        75 ~~----------~~~~~i~~d~~~~~~~~--~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ..          .+.+++ +|||++....  ..........||+.|+|||++.+.. ++.++|+|||||++|.
T Consensus       207 ~~~~~~~~~~~~~~~~kl-~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~e  277 (365)
T 3e7e_A          207 NGFLEQDDEDDLSAGLAL-IDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKP-WNYQIDYFGVAATVYC  277 (365)
T ss_dssp             GGGTCC------CTTEEE-CCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCC-BSTHHHHHHHHHHHHH
T ss_pred             ccccCccccccccCCEEE-eeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCC-CCccccHHHHHHHHHH
Confidence            31          688999 8999997543  2223445668999999999998876 7899999999999973

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=2.3e-32  Score=198.26  Aligned_cols=130  Identities=29%  Similarity=0.265  Sum_probs=113.8

Q ss_pred             cchhhhcccee-cceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            3 EMMKSMSLWVH-KRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         3 ~~~~~~~~~~~-~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      +++++...+.. +..|+||||++ ++|.+++.+.+.+++..+..++.|++.||+|||+++|+||||||+||+++ ..+.+
T Consensus       403 ~i~~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~-~~g~i  481 (674)
T 3pfq_A          403 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLD-SEGHI  481 (674)
T ss_dssp             TBCCEEEECBCSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEEC-SSSCE
T ss_pred             eEEEEEEEEEeCCEEEEEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEc-CCCcE
Confidence            46666666644 47899999995 69999999888999999999999999999999999999999999999999 67899


Q ss_pred             EEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           81 KIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ++ +|||+++.............||+.|+|||++.+.. ++.++|+||||+++|.
T Consensus       482 kL-~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~~~~~DvwSlGvilye  534 (674)
T 3pfq_A          482 KI-ADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQP-YGKSVDWWAFGVLLYE  534 (674)
T ss_dssp             EE-CCCTTCEECCCTTCCBCCCCSCSSSCCHHHHTCCC-BSTHHHHHHHHHHHHH
T ss_pred             EE-eecceeeccccCCcccccccCCCcccCHhhhcCCC-CCccceEechHHHHHH
Confidence            99 89999987555445566788999999999998776 7899999999999973

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=3.1e-32  Score=180.96  Aligned_cols=130  Identities=19%  Similarity=0.334  Sum_probs=114.1

Q ss_pred             ccchhhhccceec-ceeEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++++.+..+ ..++|||++ +++|.+++.+ ..+++..+..++.|++.|+.|||++|++|+||||+||+++ ..+.
T Consensus        77 p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~-~~~~  154 (297)
T 3fxz_A           77 PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG-MDGS  154 (297)
T ss_dssp             TTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC-TTCC
T ss_pred             CCCCeEeEEEEECCEEEEEEECCCCCCHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEC-CCCC
Confidence            4788888887554 789999999 5699999987 4789999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||++..............+|+.|+|||++.+.. ++.++|+||+|+++|.
T Consensus       155 ~kl-~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~e  208 (297)
T 3fxz_A          155 VKL-TDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKA-YGPKVDIWSLGIMAIE  208 (297)
T ss_dssp             EEE-CCCTTCEECCSTTCCBCCCCSCGGGCCHHHHHCSC-BCTHHHHHHHHHHHHH
T ss_pred             EEE-eeCCCceecCCcccccCCccCCcCccChhhhcCCC-CCcHHHHHHHHHHHHH
Confidence            999 89999987766555566778999999999998776 7889999999999973

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.98  E-value=3e-32  Score=182.69  Aligned_cols=127  Identities=22%  Similarity=0.360  Sum_probs=111.9

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++++.+.+. ..|+||||++ ++|.+++.+.+.+++..+..++.|++.|+.|||++|++||||||+||+++ ..+.
T Consensus        66 p~Iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~-~~g~  144 (318)
T 1fot_A           66 PFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLD-KNGH  144 (318)
T ss_dssp             TTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEEC-TTSC
T ss_pred             CCCceEeEEEEeCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEc-CCCC
Confidence            4678888887554 8899999995 69999999888899999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +++ +|||++......   .....||+.|+|||++.+.. ++.++|+||||+++|
T Consensus       145 ~kL-~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~  194 (318)
T 1fot_A          145 IKI-TDFGFAKYVPDV---TYTLCGTPDYIAPEVVSTKP-YNKSIDWWSFGILIY  194 (318)
T ss_dssp             EEE-CCCSSCEECSSC---BCCCCSCTTTCCHHHHTTCC-BCTTHHHHHHHHHHH
T ss_pred             EEE-eecCcceecCCc---cccccCCccccCHhHhcCCC-CCcccchhhhHHHHH
Confidence            999 899999865432   34567899999999998766 788999999999997

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.98  E-value=3.4e-32  Score=181.78  Aligned_cols=132  Identities=30%  Similarity=0.610  Sum_probs=113.2

Q ss_pred             ccchhhhccceec-ceeEEEeccCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNINLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++++++..+ ..++|||+++++|.+.+... ..+++..+..++.|++.|+.|||++|++||||||+||+++ ..+.
T Consensus        79 p~iv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~-~~~~  157 (311)
T 3niz_A           79 PNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLIN-SDGA  157 (311)
T ss_dssp             TTBCCEEEEECCSSCEEEEEECCSEEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC-TTCC
T ss_pred             CCEeeeeeEEccCCEEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEEC-CCCC
Confidence            4788888888554 78999999999999998774 4699999999999999999999999999999999999999 6688


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||++.....+........+|+.|+|||++.+...++.++|+||+|+++|.
T Consensus       158 ~kl-~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~  212 (311)
T 3niz_A          158 LKL-ADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAE  212 (311)
T ss_dssp             EEE-CCCTTCEETTSCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHH
T ss_pred             EEE-ccCcCceecCCCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHH
Confidence            999 8999998776555555666789999999999876557899999999999873

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.98  E-value=5.4e-32  Score=181.19  Aligned_cols=132  Identities=30%  Similarity=0.653  Sum_probs=114.2

Q ss_pred             ccchhhhccceec-ceeEEEeccCCCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeee
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNINLHKFIQQY------HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD   74 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~~L~~~~~~~------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~   74 (135)
                      +|++++++++..+ ..++|||+++++|.+++...      ..+++..+..++.|++.|+.|||++|++||||||+||+++
T Consensus        63 p~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~  142 (317)
T 2pmi_A           63 ENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLIN  142 (317)
T ss_dssp             TTBCCEEEEECCTTEEEEEEECCCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC
T ss_pred             CCcceEEEEEEECCeEEEEEEecCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEc
Confidence            4788888888554 78999999999999999763      3589999999999999999999999999999999999999


Q ss_pred             cCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           75 IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        75 ~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                       ..+.+++ +|||++.....+........+|+.|+|||++.+...++.++|+||||+++|.
T Consensus       143 -~~~~~kl-~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~e  201 (317)
T 2pmi_A          143 -KRGQLKL-GDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAE  201 (317)
T ss_dssp             -TTCCEEE-CCCSSCEETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHH
T ss_pred             -CCCCEEE-CcCccceecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHH
Confidence             6788999 8999998776554455566789999999999876557889999999999873

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.98  E-value=2.2e-32  Score=190.88  Aligned_cols=131  Identities=28%  Similarity=0.519  Sum_probs=108.9

Q ss_pred             ccchhhhcccee------cceeEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeec
Q 043346            2 QEMMKSMSLWVH------KRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI   75 (135)
Q Consensus         2 ~~~~~~~~~~~~------~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~   75 (135)
                      .||+++++++..      ...|+|||+++++|.+++.....+++..+..++.|++.||+|||+.+++||||||+||+++ 
T Consensus       112 ~niv~l~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~-  190 (458)
T 3rp9_A          112 DHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVN-  190 (458)
T ss_dssp             TTBCCEEEECCCSCTTTCCCEEEEECCCSEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC-
T ss_pred             CCCCceEEEEecCCcccCceEEEEEeccccchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEEC-
Confidence            477888877632      3589999999999999999888899999999999999999999999999999999999999 


Q ss_pred             CCCeeEEecccccccccCCCC---------------------------CCCCCCcccccccCcccccCCCCCCchhHHHH
Q 043346           76 ENKTVKIAADSGMAKEIDAPF---------------------------DAHTTEMVILRYRAPKILFGRTNCFAAIDMWA  128 (135)
Q Consensus        76 ~~~~~~i~~d~~~~~~~~~~~---------------------------~~~~~~~~~~~~~ape~~~~~~~~~~~~D~ws  128 (135)
                      ..+.+++ +|||+++......                           ......++|+.|+|||++.+...++.++|+||
T Consensus       191 ~~~~~kl-~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwS  269 (458)
T 3rp9_A          191 QDCSVKV-CDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWS  269 (458)
T ss_dssp             TTCCEEE-CCCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHH
T ss_pred             CCCCEee-cccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHH
Confidence            6788999 8999998764321                           12344578999999998866555889999999


Q ss_pred             hhhhhh
Q 043346          129 VLYLLR  134 (135)
Q Consensus       129 lg~il~  134 (135)
                      |||++|
T Consensus       270 lG~il~  275 (458)
T 3rp9_A          270 IGCIFA  275 (458)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999997

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.98  E-value=4.9e-32  Score=182.16  Aligned_cols=131  Identities=22%  Similarity=0.251  Sum_probs=108.7

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++++.+..+ ..|+|||+++ ++|.+++...+.+++..+..++.|++.|+.|||++|++||||||+||+++ ..+.
T Consensus        81 p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~-~~~~  159 (327)
T 3a62_A           81 PFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLN-HQGH  159 (327)
T ss_dssp             TTBCCEEEEEECSSCEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEEC-TTSC
T ss_pred             CCccceeEEEEcCCEEEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEEC-CCCc
Confidence            4778888777554 8899999996 59999999888899999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||++..............||+.|+|||++.+.. ++.++|+||||+++|.
T Consensus       160 ~kl-~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~e  213 (327)
T 3a62_A          160 VKL-TDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSG-HNRAVDWWSLGALMYD  213 (327)
T ss_dssp             EEE-CCCSCC----------CTTSSCCTTSCHHHHTTSC-CCTHHHHHHHHHHHHH
T ss_pred             EEE-EeCCcccccccCCccccccCCCcCccCHhhCcCCC-CCCcccchhHHHHHHH
Confidence            999 89999876544434455668899999999998766 6889999999999973

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.98  E-value=7.3e-32  Score=184.79  Aligned_cols=131  Identities=22%  Similarity=0.292  Sum_probs=113.0

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++++.+... ..|+|||++. ++|.+++..++.+++..+..++.|++.|+.|||++|++||||||+||+++ ..+.
T Consensus        75 p~Iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~-~~g~  153 (384)
T 4fr4_A           75 PFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLD-EHGH  153 (384)
T ss_dssp             TTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC-TTSC
T ss_pred             CCCCcEEEEEEeCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEC-CCCC
Confidence            4678887777554 8899999995 59999999888999999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCC--CCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGR--TNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~--~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||++...... .......||+.|+|||++.+.  ..++.++|+|||||++|.
T Consensus       154 vkL-~DFG~a~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~e  209 (384)
T 4fr4_A          154 VHI-TDFNIAAMLPRE-TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYE  209 (384)
T ss_dssp             EEE-CCCTTCEECCTT-CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHH
T ss_pred             EEE-eccceeeeccCC-CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHH
Confidence            999 899999876443 344567899999999999643  236789999999999973

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.98  E-value=2.9e-32  Score=189.39  Aligned_cols=131  Identities=18%  Similarity=0.265  Sum_probs=111.5

Q ss_pred             ccchhhhccceec-ceeEEEecc-CCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYV-NINLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~-~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      +|+++++..+.++ ..|+||||+ +|+|.+++.+ .+.+++..+..++.|++.|+.|||+++++||||||+||+++ ..+
T Consensus       134 p~Iv~l~~~~~~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~-~~g  212 (437)
T 4aw2_A          134 KWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMD-MNG  212 (437)
T ss_dssp             TTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC-TTS
T ss_pred             CCEEEEEEEEeeCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEc-CCC
Confidence            4677887777554 889999999 5799999987 57899999999999999999999999999999999999999 778


Q ss_pred             eeEEecccccccccCCCCC-CCCCCcccccccCcccccC----CCCCCchhHHHHhhhhhh
Q 043346           79 TVKIAADSGMAKEIDAPFD-AHTTEMVILRYRAPKILFG----RTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~----~~~~~~~~D~wslg~il~  134 (135)
                      .+|+ +|||+++....... ......||+.|+|||++.+    ...++.++|+||+||++|
T Consensus       213 ~vkL-~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~  272 (437)
T 4aw2_A          213 HIRL-ADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMY  272 (437)
T ss_dssp             CEEE-CCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHH
T ss_pred             CEEE-cchhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHH
Confidence            9999 89999976654432 3345689999999999962    333788999999999997

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.98  E-value=5.9e-32  Score=184.00  Aligned_cols=130  Identities=24%  Similarity=0.366  Sum_probs=112.7

Q ss_pred             ccchhhhccceec-ceeEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC-
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK-   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~-   78 (135)
                      .|++++++++.+. ..++|||++ +++|.+++.+.+.+++..+..++.|++.|+.|||++|++|+||||+||+++..+. 
T Consensus        75 pnIv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~  154 (361)
T 2yab_A           75 PNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIP  154 (361)
T ss_dssp             TTBCCEEEEEECSSEEEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSS
T ss_pred             cCCCcEEEEEEeCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCC
Confidence            4788888888655 789999999 5799999998888999999999999999999999999999999999999984432 


Q ss_pred             --eeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           79 --TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        79 --~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                        .+++ +|||++...... .......||+.|+|||++.+.. ++.++|+||+|+++|
T Consensus       155 ~~~vkl-~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslGvil~  209 (361)
T 2yab_A          155 IPHIKL-IDFGLAHEIEDG-VEFKNIFGTPEFVAPEIVNYEP-LGLEADMWSIGVITY  209 (361)
T ss_dssp             SCCEEE-CCCSSCEECCTT-CCCCCCCSCGGGCCHHHHTTCC-CCTHHHHHHHHHHHH
T ss_pred             ccCEEE-EecCCceEcCCC-CccccCCCCccEECchHHcCCC-CCccccHHHHHHHHH
Confidence              7899 899999876544 3345567999999999998766 788999999999987

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.98  E-value=2.7e-32  Score=183.44  Aligned_cols=132  Identities=33%  Similarity=0.712  Sum_probs=108.2

Q ss_pred             ccchhhhccceec-ceeEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeec----C
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI----E   76 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~----~   76 (135)
                      .|++++++++.++ ..++|||+++++|.+++.+.+.+++..+..++.|++.|+.|||+++++|+||||+||+++.    .
T Consensus        93 ~~iv~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~  172 (329)
T 3gbz_A           93 RNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASE  172 (329)
T ss_dssp             TTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----
T ss_pred             CCcceEEEEEecCCEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCc
Confidence            4788888888655 7899999999999999999888999999999999999999999999999999999999962    3


Q ss_pred             CCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           77 NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        77 ~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .+.+++ +|||++..............+|+.|+|||++.+...++.++|+||||+++|
T Consensus       173 ~~~~kl-~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~  229 (329)
T 3gbz_A          173 TPVLKI-GDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWA  229 (329)
T ss_dssp             CCEEEE-CCTTHHHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHH
T ss_pred             cceEEE-CcCCCccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHH
Confidence            456899 899999877655455566678999999999987666789999999999987

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.98  E-value=5.3e-32  Score=188.51  Aligned_cols=131  Identities=23%  Similarity=0.268  Sum_probs=112.0

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhh-CCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHA-RKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~~~nil~~~~~~   78 (135)
                      .|++++++.+..+ ..++||||++ ++|.+++.+.+.+++..+..++.|++.||+|||+ +|++||||||+||+++ ..+
T Consensus       208 ~~iv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~-~~~  286 (446)
T 4ejn_A          208 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLD-KDG  286 (446)
T ss_dssp             TTSCCEEEEEEETTEEEEEECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEEC-SSS
T ss_pred             CeEeeEEEEEeeCCEEEEEEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEEC-CCC
Confidence            3677887777554 7899999995 6999999988899999999999999999999998 9999999999999999 678


Q ss_pred             eeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           79 TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      .+++ +|||++..............||+.|+|||++.+.. ++.++|+||||+++|.
T Consensus       287 ~~kl-~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~e  341 (446)
T 4ejn_A          287 HIKI-TDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDND-YGRAVDWWGLGVVMYE  341 (446)
T ss_dssp             CEEE-CCCCCCCTTCC-----CCSSSCGGGCCHHHHHTSC-CCTHHHHHHHHHHHHH
T ss_pred             CEEE-ccCCCceeccCCCcccccccCCccccCHhhcCCCC-CCCccchhhhHHHHHH
Confidence            8999 89999986555445556678999999999998776 7889999999999973

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.98  E-value=6.1e-32  Score=183.30  Aligned_cols=128  Identities=23%  Similarity=0.301  Sum_probs=112.0

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .+++++++.+.+. ..|+|||++. ++|.+++.+.+.+++..+..++.|++.|+.|||++|++||||||+||+++ ..+.
T Consensus       101 p~iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~-~~g~  179 (350)
T 1rdq_E          101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGY  179 (350)
T ss_dssp             TTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC-TTSC
T ss_pred             CCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEEC-CCCC
Confidence            4677787777544 8899999994 69999999888899999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||++......   .....||+.|+|||++.+.. ++.++|+||||+++|.
T Consensus       180 ~kL-~DFg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~e  230 (350)
T 1rdq_E          180 IQV-TDFGFAKRVKGR---TWTLCGTPEALAPEIILSKG-YNKAVDWWALGVLIYE  230 (350)
T ss_dssp             EEE-CCCTTCEECSSC---BCCCEECGGGCCHHHHTTCC-BCTHHHHHHHHHHHHH
T ss_pred             EEE-cccccceeccCC---cccccCCccccCHHHhcCCC-CCCcCCEecccHhHhH
Confidence            999 899999876443   34567899999999998766 7889999999999973

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.97  E-value=4.5e-32  Score=179.30  Aligned_cols=131  Identities=37%  Similarity=0.640  Sum_probs=109.3

Q ss_pred             ccchhhhccceec-ceeEEEeccCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNINLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++++++..+ ..++|||+++++|.+++.. .+.+++..+..++.|++.|+.|||++|++|+||||+||+++ ..+.
T Consensus        60 ~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~-~~~~  138 (288)
T 1ob3_A           60 SNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLIN-REGE  138 (288)
T ss_dssp             TTBCCEEEEEECSSCEEEEEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC-TTSC
T ss_pred             CCEeeeeeEEccCCeEEEEEEecCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc-CCCC
Confidence            4788888888554 8899999999999999986 36799999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +++ +|||++.....+........+|+.|+|||++.+...++.++|+||+|+++|
T Consensus       139 ~kl-~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~  192 (288)
T 1ob3_A          139 LKI-ADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFA  192 (288)
T ss_dssp             EEE-CCTTHHHHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHH
T ss_pred             EEE-eECccccccCccccccccccccccccCchheeCCCCCCcHHHHHHHHHHHH
Confidence            999 899999876554444455678999999999977655788999999999987

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.97  E-value=5.1e-32  Score=187.99  Aligned_cols=131  Identities=28%  Similarity=0.485  Sum_probs=109.5

Q ss_pred             ccchhhhcccee------cceeEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeec
Q 043346            2 QEMMKSMSLWVH------KRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI   75 (135)
Q Consensus         2 ~~~~~~~~~~~~------~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~   75 (135)
                      .|++++++++..      ...|+|||+++++|.+++..+..+++..+..++.|++.||+|||++|++||||||+||+++ 
T Consensus        85 ~nIv~l~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~-  163 (432)
T 3n9x_A           85 DYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLN-  163 (432)
T ss_dssp             TTBCCEEEECCCSCTTTCCCEEEEEECCSEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC-
T ss_pred             CCcceEEEEEecCCCCcCCeEEEEEecCCcCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEEC-
Confidence            367777777643      3589999999999999999888899999999999999999999999999999999999999 


Q ss_pred             CCCeeEEecccccccccCCCCC----------------------CCCCCcccccccCcccccCCCCCCchhHHHHhhhhh
Q 043346           76 ENKTVKIAADSGMAKEIDAPFD----------------------AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLL  133 (135)
Q Consensus        76 ~~~~~~i~~d~~~~~~~~~~~~----------------------~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il  133 (135)
                      ..+.+++ +|||+++.......                      ......+|+.|+|||++.+...++.++|+||+||++
T Consensus       164 ~~~~~kL-~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il  242 (432)
T 3n9x_A          164 QDCSVKV-CDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIF  242 (432)
T ss_dssp             TTCCEEE-CCCTTCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHH
T ss_pred             CCCCEEE-ccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHH
Confidence            6788999 89999987643321                      235678899999999986666688999999999999


Q ss_pred             h
Q 043346          134 R  134 (135)
Q Consensus       134 ~  134 (135)
                      |
T Consensus       243 ~  243 (432)
T 3n9x_A          243 A  243 (432)
T ss_dssp             H
T ss_pred             H
Confidence            7

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.97  E-value=5.8e-32  Score=181.73  Aligned_cols=132  Identities=25%  Similarity=0.322  Sum_probs=96.3

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC--
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN--   77 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~--   77 (135)
                      +|++++++++.++ ..|+|||+++ ++|.+++.+.+.+++..+..++.|++.|+.|||+++++||||||+||+++.++  
T Consensus        66 ~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~  145 (325)
T 3kn6_A           66 PNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDN  145 (325)
T ss_dssp             TTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----
T ss_pred             CCeeEEEEEEEcCCEEEEEEEccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCc
Confidence            4788888888655 7899999995 59999999988999999999999999999999999999999999999998432  


Q ss_pred             CeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           78 KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ..+++ +|||++..............+|+.|+|||++.+.. ++.++|+||+|+++|.
T Consensus       146 ~~~kl-~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~-~~~~~DiwslG~il~~  201 (325)
T 3kn6_A          146 LEIKI-IDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNG-YDESCDLWSLGVILYT  201 (325)
T ss_dssp             CEEEE-CCCTTCEECCC----------------------CC-CCHHHHHHHHHHHHHH
T ss_pred             ccEEE-eccccceecCCCCCcccccCCCcCccCHHHhcCCC-CCCccchHHHHHHHHH
Confidence            27899 89999987665545556667899999999997766 7889999999999873

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.97  E-value=7.5e-32  Score=186.19  Aligned_cols=131  Identities=20%  Similarity=0.278  Sum_probs=110.8

Q ss_pred             ccchhhhccceec-ceeEEEecc-CCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYV-NINLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      .++++++..+.+. ..|+||||+ +++|.+++.+. ..+++..+..++.|++.|++|||+++++||||||+||+++ ..+
T Consensus       121 p~Iv~l~~~~~~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld-~~g  199 (412)
T 2vd5_A          121 RWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLD-RCG  199 (412)
T ss_dssp             TTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC-TTS
T ss_pred             CCeeeEEEEEeeCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeec-CCC
Confidence            3677777777544 789999999 57999999875 4799999999999999999999999999999999999999 678


Q ss_pred             eeEEecccccccccCCCCC-CCCCCcccccccCcccccC------CCCCCchhHHHHhhhhhh
Q 043346           79 TVKIAADSGMAKEIDAPFD-AHTTEMVILRYRAPKILFG------RTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~------~~~~~~~~D~wslg~il~  134 (135)
                      .+++ +|||++........ ......||+.|+|||++.+      ...++.++|+|||||++|
T Consensus       200 ~vkL-~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvily  261 (412)
T 2vd5_A          200 HIRL-ADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAY  261 (412)
T ss_dssp             CEEE-CCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHH
T ss_pred             CEEE-eechhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHH
Confidence            9999 89999987654432 2345689999999999963      223688999999999997

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.97  E-value=3.2e-32  Score=184.13  Aligned_cols=132  Identities=24%  Similarity=0.319  Sum_probs=113.4

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC--
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN--   77 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~--   77 (135)
                      .|++++++++.++ ..|+|||+++ ++|.+++.+.+.+++..+..++.|++.|+.|||++|++||||||+||++....  
T Consensus        76 p~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~  155 (342)
T 2qr7_A           76 PNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGN  155 (342)
T ss_dssp             TTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCS
T ss_pred             CCcCeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCC
Confidence            4788888888655 7899999995 69999999888899999999999999999999999999999999999985333  


Q ss_pred             -CeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           78 -KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        78 -~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                       +.+++ +|||++..............+|+.|+|||++.+.. ++.++|+||||+++|.
T Consensus       156 ~~~~kl-~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~e  212 (342)
T 2qr7_A          156 PESIRI-CDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQG-YDAACDIWSLGVLLYT  212 (342)
T ss_dssp             GGGEEE-CCCTTCEECBCTTCCBCCSSCCSSCCCHHHHHHHH-HHHHHHHHHHHHHHHH
T ss_pred             cCeEEE-EECCCcccCcCCCCceeccCCCccccCHHHhcCCC-CCCccCeeeHhHHHHH
Confidence             34899 89999987765545556678899999999997765 6789999999999973

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.97  E-value=7.5e-32  Score=186.09  Aligned_cols=130  Identities=18%  Similarity=0.259  Sum_probs=111.0

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++++.+.++ ..|+||||++ |+|.+++.+ ..+++..+..++.|++.|++|||++|++||||||+||+++ ..+.
T Consensus       129 p~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~-~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~-~~g~  206 (410)
T 3v8s_A          129 PWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLD-KSGH  206 (410)
T ss_dssp             TTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC-TTSC
T ss_pred             CCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeEC-CCCC
Confidence            4678888887555 7899999995 699999876 5799999999999999999999999999999999999999 6789


Q ss_pred             eEEecccccccccCCCCC-CCCCCcccccccCcccccCCCC---CCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFD-AHTTEMVILRYRAPKILFGRTN---CFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~---~~~~~D~wslg~il~  134 (135)
                      +++ +|||++........ ......||+.|+|||++.+...   ++.++|+|||||++|
T Consensus       207 ikL-~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvily  264 (410)
T 3v8s_A          207 LKL-ADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLY  264 (410)
T ss_dssp             EEE-CCCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHH
T ss_pred             EEE-eccceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHH
Confidence            999 89999987654322 3446789999999999976542   567999999999997

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.97  E-value=1e-31  Score=184.11  Aligned_cols=130  Identities=27%  Similarity=0.485  Sum_probs=109.1

Q ss_pred             ccchhhhccceec---ceeEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHK---RENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~---~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      .|++++++++...   ..|+|||+++++|.+++.. +.+++..+..++.|++.|++|||++|++||||||+||+++ ..+
T Consensus        69 ~niv~l~~~~~~~~~~~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~-~~~  146 (388)
T 3oz6_A           69 ENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRA-NILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLN-AEC  146 (388)
T ss_dssp             TTBCCEEEEEECTTSSCEEEEEECCSEEHHHHHHH-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC-TTC
T ss_pred             CCCCeeeeEEecCCCCEEEEEecccCcCHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEc-CCC
Confidence            4788888887432   6899999999999999987 5799999999999999999999999999999999999999 678


Q ss_pred             eeEEecccccccccCCC---------------------CCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           79 TVKIAADSGMAKEIDAP---------------------FDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~---------------------~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .+++ +|||+++.....                     ........+|+.|+|||++.+...++.++|+||+||++|
T Consensus       147 ~~kl-~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~  222 (388)
T 3oz6_A          147 HVKV-ADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILG  222 (388)
T ss_dssp             CEEE-CCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHH
T ss_pred             CEEe-cCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHH
Confidence            8999 899999865321                     112344689999999999987655889999999999997

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.97  E-value=2.6e-31  Score=177.06  Aligned_cols=129  Identities=32%  Similarity=0.532  Sum_probs=110.9

Q ss_pred             ccchhhhccceec------ceeEEEeccCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceee
Q 043346            2 QEMMKSMSLWVHK------RENLVFEYVNINLHKFIQQYH--PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLA   73 (135)
Q Consensus         2 ~~~~~~~~~~~~~------~~~lv~e~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~   73 (135)
                      .|++++++++...      ..+++||+++++|.+++....  .+++..+..++.|++.|++|||+++++|+||||+||++
T Consensus        74 ~niv~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~  153 (308)
T 3g33_A           74 PNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILV  153 (308)
T ss_dssp             TTBCCEEEEEEECCSSSEEEEEEEEECCCCBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEE
T ss_pred             CCeEEeeeeeeccCCCCceeEEEEehhhhcCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE
Confidence            4678888877543      378999999999999998754  38999999999999999999999999999999999999


Q ss_pred             ecCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           74 DIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        74 ~~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      + ..+.+++ +|||++...... .......+|+.|+|||++.+.. ++.++|+||||+++|
T Consensus       154 ~-~~~~~kl-~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~  210 (308)
T 3g33_A          154 T-SGGTVKL-ADFGLARIYSYQ-MALTPVVVTLWYRAPEVLLQST-YATPVDMWSVGCIFA  210 (308)
T ss_dssp             C-TTSCEEE-CSCSCTTTSTTC-CCSGGGGCCCSSCCHHHHHTSC-CCSTHHHHHHHHHHH
T ss_pred             c-CCCCEEE-eeCccccccCCC-cccCCccccccccCchHHcCCC-CCchHHHHHHHHHHH
Confidence            8 6788999 899999866443 3345567899999999998776 788999999999987

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.97  E-value=1.4e-31  Score=177.62  Aligned_cols=131  Identities=27%  Similarity=0.408  Sum_probs=107.6

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++++++.++ ..|+|||+++ ++|.+++...+++++..+..++.|++.|+.|||+++++|+||||+||+++ .++.
T Consensus        71 p~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~-~~~~  149 (294)
T 4eqm_A           71 QNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILID-SNKT  149 (294)
T ss_dssp             TTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC-TTSC
T ss_pred             CCCceEEEeeeeCCeEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC-CCCC
Confidence            4778888888555 7899999995 59999999888999999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCC-CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPF-DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||++....... .......+|+.|+|||.+.+.. .+.++|+||+|+++|+
T Consensus       150 ~kl-~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~~l~~  204 (294)
T 4eqm_A          150 LKI-FDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEA-TDECTDIYSIGIVLYE  204 (294)
T ss_dssp             EEE-CCCSSSTTC-------------CCSSCCHHHHHTCC-CCTTHHHHHHHHHHHH
T ss_pred             EEE-EeCCCccccccccccccCccccCccccCHhHhcCCC-CCchHhHHHHHHHHHH
Confidence            999 8999998764432 2234457899999999998876 6788999999999973

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.97  E-value=2e-31  Score=178.00  Aligned_cols=128  Identities=18%  Similarity=0.256  Sum_probs=108.4

Q ss_pred             ccchhhhccceec-ceeEEEeccCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNINLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      +|++++++++.++ ..++|||+++++|.+++... ..+++..+..++.|++.|++|||+++++|+||||+||+++ ..+.
T Consensus       117 ~~iv~l~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~-~~~~  195 (311)
T 3p1a_A          117 PCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLG-PRGR  195 (311)
T ss_dssp             TTBCCEEEEEEETTEEEEEEECCCCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC-GGGC
T ss_pred             CcEEEEEEEEEeCCEEEEEEeccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEC-CCCC
Confidence            4788888888655 78999999999999998764 4699999999999999999999999999999999999998 6688


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +++ +|||++...... .......||+.|+|||++.+.  ++.++|+||+|+++|
T Consensus       196 ~kl-~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~--~~~~~DiwslG~il~  246 (311)
T 3p1a_A          196 CKL-GDFGLLVELGTA-GAGEVQEGDPRYMAPELLQGS--YGTAADVFSLGLTIL  246 (311)
T ss_dssp             EEE-CCCTTCEECC-------CCCCCGGGCCGGGGGTC--CSTHHHHHHHHHHHH
T ss_pred             EEE-ccceeeeecccC-CCCcccCCCccccCHhHhcCC--CCchhhHHHHHHHHH
Confidence            999 899998766443 334455789999999999763  788999999999987

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.97  E-value=1.5e-31  Score=179.79  Aligned_cols=131  Identities=18%  Similarity=0.231  Sum_probs=111.5

Q ss_pred             ccchhhhccceec-ceeEEEeccCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNINLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++++++..+ ..++|||+++++|.+++.. .+.+++..+..++.|++.|++|||+++++||||||+||+++ ..+.
T Consensus        65 ~~i~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~-~~~~  143 (330)
T 2izr_A           65 DGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIG-RPGN  143 (330)
T ss_dssp             TTSCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC-CGGG
T ss_pred             CCCCEEEEEEecCCccEEEEEeCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeec-cCCC
Confidence            4677787777555 6799999998899999986 46899999999999999999999999999999999999998 4444


Q ss_pred             -----eEEecccccccccCCCCC-------CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 -----VKIAADSGMAKEIDAPFD-------AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 -----~~i~~d~~~~~~~~~~~~-------~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                           +++ +|||++........       ......||+.|+|||++.+.. ++.++|+||||+++|+
T Consensus       144 ~~~~~~kl-~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~il~e  209 (330)
T 2izr_A          144 KTQQVIHI-IDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKE-QSRRDDLEALGHMFMY  209 (330)
T ss_dssp             TCTTSEEE-CCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCC-CCHHHHHHHHHHHHHH
T ss_pred             CCCceEEE-EEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCC-CCchhHHHHHHHHHHH
Confidence                 899 89999987644322       235678999999999998876 7889999999999973

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.97  E-value=8.8e-33  Score=197.21  Aligned_cols=125  Identities=12%  Similarity=0.036  Sum_probs=93.7

Q ss_pred             cchhhhccceec-ceeEEEeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            3 EMMKSMSLWVHK-RENLVFEYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         3 ~~~~~~~~~~~~-~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      |+++++++++++ ..||||||++| +|.+.+.+++++++.   .++.||+.||+|+|++||+||||||+||+++ .++.+
T Consensus       303 ~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~~~~~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~-~dg~v  378 (569)
T 4azs_A          303 DAPAVLAHGENAQSGWLVMEKLPGRLLSDMLAAGEEIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVD-ARQHA  378 (569)
T ss_dssp             CCCCEEEEEECSSEEEEEEECCCSEEHHHHHHTTCCCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEEC-TTSCE
T ss_pred             CeeEEEEEEEECCEEEEEEecCCCCcHHHHHHhCCCCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEEC-CCCCE
Confidence            688888888665 89999999965 999999998888865   4789999999999999999999999999999 67899


Q ss_pred             EEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           81 KIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      |+ +|||+++..........+.+||+.|+|||++.+..  ..++|+||+|++++
T Consensus       379 KL-~DFGlAr~~~~~~~~~~t~vGTp~YmAPE~l~g~~--~~~~d~~s~g~~~~  429 (569)
T 4azs_A          379 RL-IDFGSIVTTPQDCSWPTNLVQSFFVFVNELFAENK--SWNGFWRSAPVHPF  429 (569)
T ss_dssp             EE-CCCTTEESCC---CCSHHHHHHHHHHHHHHC-------------------C
T ss_pred             EE-eecccCeeCCCCCccccCceechhhccHHHhCCCC--CCcccccccccchh
Confidence            99 89999988766655666778999999999998763  56789999998765

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.97  E-value=2.6e-31  Score=180.88  Aligned_cols=130  Identities=26%  Similarity=0.364  Sum_probs=112.2

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecC--C
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE--N   77 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~--~   77 (135)
                      .|++++++++.++ ..|+|||++. ++|.+++...+.+++..+..++.|++.|+.|||+++++||||||+||+++..  .
T Consensus        88 pnIv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~  167 (362)
T 2bdw_A           88 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKG  167 (362)
T ss_dssp             TTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTT
T ss_pred             CCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCC
Confidence            4788888888655 7899999995 5999999888889999999999999999999999999999999999999843  2


Q ss_pred             CeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           78 KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +.+++ +|||++...... .......||+.|+|||++.+.. ++.++|+|||||++|
T Consensus       168 ~~~kl-~DfG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~  221 (362)
T 2bdw_A          168 AAVKL-ADFGLAIEVNDS-EAWHGFAGTPGYLSPEVLKKDP-YSKPVDIWACGVILY  221 (362)
T ss_dssp             CCEEE-CCCTTCBCCTTC-CSCCCSCSCTTTCCHHHHTTCC-CCTHHHHHHHHHHHH
T ss_pred             CCEEE-eecCcceEecCC-cccccCCCCccccCHHHHccCC-CCchhhHHHHHHHHH
Confidence            46899 899999876543 3344568999999999998766 788999999999997

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.97  E-value=1.4e-31  Score=179.63  Aligned_cols=132  Identities=34%  Similarity=0.651  Sum_probs=107.3

Q ss_pred             ccchhhhccceec-ceeEEEeccCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNINLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++++++..+ ..++|||+++++|.+++... ..+++..+..++.|++.|+.|||++|++|+||||+||+++ ..+.
T Consensus        60 ~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~-~~~~  138 (324)
T 3mtl_A           60 ANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLIN-ERGE  138 (324)
T ss_dssp             TTBCCEEEEEECSSCEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEEC-TTCC
T ss_pred             CCCCeeeeEEeeCCEEEEEecccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEEC-CCCC
Confidence            4788888888554 78999999999999999874 4689999999999999999999999999999999999999 6688


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||++.....+........+|+.|+|||++.+...++.++|+||+|+++|+
T Consensus       139 ~kl-~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~  193 (324)
T 3mtl_A          139 LKL-ADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYE  193 (324)
T ss_dssp             EEE-CSSSEEECC------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHH
T ss_pred             EEE-ccCcccccccCCccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHH
Confidence            999 8999998766554455566789999999999876657899999999999873

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.97  E-value=2.8e-31  Score=176.99  Aligned_cols=130  Identities=28%  Similarity=0.367  Sum_probs=110.3

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      .|++++++++.++ ..++|||+++ ++|.+++.. ...+++..+..++.|++.|++|||+++++|+||||+||+++ .++
T Consensus        67 p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~-~~~  145 (310)
T 3s95_A           67 PNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVR-ENK  145 (310)
T ss_dssp             TTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEC-TTS
T ss_pred             cCcccEEEEEecCCeeEEEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEEC-CCC
Confidence            4788888888655 7889999995 599999987 56799999999999999999999999999999999999999 678


Q ss_pred             eeEEecccccccccCCCCCC--------------CCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           79 TVKIAADSGMAKEIDAPFDA--------------HTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~--------------~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .+++ +|||++.........              .....||+.|+|||++.+.. ++.++|+||+|+++|
T Consensus       146 ~~kl-~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~~l~  213 (310)
T 3s95_A          146 NVVV-ADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRS-YDEKVDVFSFGIVLC  213 (310)
T ss_dssp             CEEE-CCCTTCEECC--------------------CCCCSCGGGCCHHHHTTCC-CCTHHHHHHHHHHHH
T ss_pred             CEEE-eecccceecccccccccccccccccccccccccCCCcceeCHHHhcCCC-CCcHHHHHHHHHHHH
Confidence            8999 899999866433221              12567899999999998766 788999999999987

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.97  E-value=2e-31  Score=189.09  Aligned_cols=131  Identities=24%  Similarity=0.274  Sum_probs=113.0

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeec
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQY----HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI   75 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~   75 (135)
                      +++++++..+... ..|+||||++ ++|.+++...    ..+++..+..++.|++.|+.|||++|++||||||+||+++ 
T Consensus       245 p~Iv~l~~~~~~~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~-  323 (543)
T 3c4z_A          245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLD-  323 (543)
T ss_dssp             TTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC-
T ss_pred             CCEeeEEEEEeeCCEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEe-
Confidence            3677777777544 7899999995 6999999763    3699999999999999999999999999999999999999 


Q ss_pred             CCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           76 ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        76 ~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ..+.+++ +|||++..............||+.|+|||++.+.. ++.++|+|||||++|.
T Consensus       324 ~~g~vkL-~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~~~~~DiwSlGvilye  381 (543)
T 3c4z_A          324 DDGNVRI-SDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEE-YDFSVDYFALGVTLYE  381 (543)
T ss_dssp             TTSCEEE-CCCTTCEECCTTCCCBCCCCSCTTTSCHHHHTTCC-BCTHHHHHHHHHHHHH
T ss_pred             CCCCEEE-eecceeeeccCCCcccccccCCccccChhhhcCCC-CChHHhcCcchHHHHH
Confidence            6789999 89999987765544455668999999999998765 7889999999999983

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.97  E-value=3.2e-31  Score=178.12  Aligned_cols=131  Identities=24%  Similarity=0.346  Sum_probs=111.8

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC--
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN--   77 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~--   77 (135)
                      .|++++++++.++ ..++|||++. ++|.+++.+.+.+++..+..++.|++.|+.|||+++++|+||||+||+++..+  
T Consensus        74 p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~  153 (326)
T 2y0a_A           74 PNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVP  153 (326)
T ss_dssp             TTBCCEEEEEECSSEEEEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSS
T ss_pred             CCCCcEEEEEEeCCEEEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCC
Confidence            4788888888655 7899999995 69999998888899999999999999999999999999999999999998332  


Q ss_pred             -CeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           78 -KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        78 -~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                       ..+++ +|||++...... .......+|+.|+|||++.+.. ++.++|+||||+++|+
T Consensus       154 ~~~~kl-~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~~  209 (326)
T 2y0a_A          154 KPRIKI-IDFGLAHKIDFG-NEFKNIFGTPEFVAPEIVNYEP-LGLEADMWSIGVITYI  209 (326)
T ss_dssp             SCCEEE-CCCTTCEECCTT-SCCCCCCSCTTTCCHHHHTTCC-CCTHHHHHHHHHHHHH
T ss_pred             CCCEEE-EECCCCeECCCC-CccccccCCcCcCCceeecCCC-CCcHHHHHHHHHHHHH
Confidence             17899 899999876543 2334567899999999997766 7889999999999873

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.97  E-value=1.9e-31  Score=186.96  Aligned_cols=130  Identities=28%  Similarity=0.469  Sum_probs=114.2

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++++++... ..|+|||++. ++|.+++.+++.+++..+..++.|++.|++|||+++++||||||+||+++ ..+.
T Consensus        76 pnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~-~~~~  154 (476)
T 2y94_A           76 PHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLD-AHMN  154 (476)
T ss_dssp             TTBCCEEEEEECSSEEEEEEECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEC-TTCC
T ss_pred             CCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEe-cCCC
Confidence            4788888888554 8899999995 69999999888899999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +++ +|||++...... .......||+.|+|||++.+....+.++|+||+|+++|
T Consensus       155 vkL-~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~  207 (476)
T 2y94_A          155 AKI-ADFGLSNMMSDG-EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILY  207 (476)
T ss_dssp             EEE-CCCSSCEECCTT-CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHH
T ss_pred             eEE-Eeccchhhcccc-ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHH
Confidence            999 899999876543 33455689999999999988765678999999999987

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.97  E-value=4.9e-31  Score=178.81  Aligned_cols=132  Identities=19%  Similarity=0.329  Sum_probs=111.3

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeec
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQY----HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI   75 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~   75 (135)
                      .||+++++.+.++ ..|+|||+++ ++|.+++.+.    ..+++..+..++.|++.|+.|||+++++||||||+||+++.
T Consensus        86 pnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~  165 (351)
T 3c0i_A           86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLAS  165 (351)
T ss_dssp             TTBCCEEEEEEETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECS
T ss_pred             CCCCcEEEEEEeCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEec
Confidence            4788888888655 7899999996 6998888642    35899999999999999999999999999999999999984


Q ss_pred             CC--CeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           76 EN--KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        76 ~~--~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +.  ..+++ +|||++..............+|+.|+|||++.+.. ++.++|+||+||++|.
T Consensus       166 ~~~~~~vkl-~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~~  225 (351)
T 3c0i_A          166 KENSAPVKL-GGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREP-YGKPVDVWGCGVILFI  225 (351)
T ss_dssp             SSTTCCEEE-CCCTTCEECCTTSCBCCCCCSCGGGCCHHHHTTCC-BCTHHHHHHHHHHHHH
T ss_pred             CCCCCcEEE-ecCcceeEecCCCeeecCCcCCcCccCHHHHcCCC-CCchHhhHHHHHHHHH
Confidence            32  34899 89999987765544455678999999999998766 6889999999999973

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.97  E-value=3.1e-31  Score=182.55  Aligned_cols=131  Identities=25%  Similarity=0.342  Sum_probs=103.7

Q ss_pred             ccchhhhccce-----ecceeEEEeccC-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceee
Q 043346            2 QEMMKSMSLWV-----HKRENLVFEYVN-INLHKFIQQYH--PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLA   73 (135)
Q Consensus         2 ~~~~~~~~~~~-----~~~~~lv~e~~~-~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~   73 (135)
                      .|++++++++.     +...|+||||++ ++|.+++...+  .+++..+..++.|++.|+.|||+++++||||||+||++
T Consensus       115 p~iv~l~~~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill  194 (400)
T 1nxk_A          115 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLY  194 (400)
T ss_dssp             TTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE
T ss_pred             CCcceEeEEEeecccCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEE
Confidence            46777777664     346899999995 59999998743  59999999999999999999999999999999999999


Q ss_pred             ecC--CCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           74 DIE--NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        74 ~~~--~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +..  .+.+++ +|||+++..... .......+|+.|+|||++.+.. ++.++|+|||||++|.
T Consensus       195 ~~~~~~~~~kl-~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~e  255 (400)
T 1nxk_A          195 TSKRPNAILKL-TDFGFAKETTSH-NSLTTPCYTPYYVAPEVLGPEK-YDKSCDMWSLGVIMYI  255 (400)
T ss_dssp             SSSSTTCCEEE-CCCTTCEECC------------CTTCCGGGSCCCC-SSSHHHHHHHHHHHHH
T ss_pred             ecCCCCccEEE-EecccccccCCC-CccccCCCCCCccCHhhcCCCC-CCCcccHHHHHHHHHH
Confidence            843  578999 899999866433 2334567899999999997765 7889999999999973

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.97  E-value=2.5e-31  Score=177.53  Aligned_cols=130  Identities=23%  Similarity=0.375  Sum_probs=101.5

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHhhCC--cccCCCCCcceeee
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYH---PMDSHLIKKFLYCILSGISYCHARK--IIHRDLTTMNLLAD   74 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lh~~~--i~h~dl~~~nil~~   74 (135)
                      .|++++++++.+. ..++|||+++ ++|.+++.+.+   .+++..+..++.|++.|++|||+++  ++||||||+||+++
T Consensus        94 p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~  173 (309)
T 3p86_A           94 PNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVD  173 (309)
T ss_dssp             TTBCCEEEEECSTTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEEC
T ss_pred             CCEeeEEEEEEECCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEe
Confidence            4788888888554 7899999995 59999998754   3899999999999999999999999  99999999999999


Q ss_pred             cCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           75 IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        75 ~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                       ..+.+++ +|||++..............+|+.|+|||++.+.. .+.++|+||||+++|
T Consensus       174 -~~~~~kL-~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~  230 (309)
T 3p86_A          174 -KKYTVKV-CDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEP-SNEKSDVYSFGVILW  230 (309)
T ss_dssp             -TTCCEEE-CCCC-----------------CCTTSCHHHHTTCC-CCTTHHHHHHHHHHH
T ss_pred             -CCCcEEE-CCCCCCccccccccccccCCCCccccChhhhcCCC-CCchhhHHHHHHHHH
Confidence             6788999 89999986655444455678899999999998776 688999999999987

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.97  E-value=2.7e-31  Score=180.69  Aligned_cols=132  Identities=24%  Similarity=0.326  Sum_probs=102.6

Q ss_pred             ccchhhhccceec-ceeEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC-C
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN-K   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~-~   78 (135)
                      .|++++++++..+ ..++||||+ +++|.+++...+.+++..+..++.|++.|++|||++|++||||||+||+++.+. +
T Consensus        76 pniv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~  155 (361)
T 3uc3_A           76 PNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAP  155 (361)
T ss_dssp             TTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSC
T ss_pred             CCCCcEEEEEeeCCEEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCc
Confidence            4788888888544 789999999 569999998888999999999999999999999999999999999999998332 3


Q ss_pred             eeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           79 TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      .+++ +|||+++..... .......+|+.|+|||++.+....+.++|+||+|+++|.
T Consensus       156 ~~kl-~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~e  210 (361)
T 3uc3_A          156 RLKI-CDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYV  210 (361)
T ss_dssp             CEEE-CCCCCC----------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHH
T ss_pred             eEEE-eecCcccccccc-CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHH
Confidence            4899 899998754332 233455789999999999887755556899999999873

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.97  E-value=5.1e-31  Score=177.79  Aligned_cols=131  Identities=24%  Similarity=0.382  Sum_probs=113.9

Q ss_pred             ccchhhhccceec-ceeEEEecc-CC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYV-NI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~-~~-~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      .|++++++++.+. ..++|||++ ++ +|.+++...+.+++..+..++.|++.|+.|||+++++|+||||+||+++ ..+
T Consensus        89 ~~Iv~~~~~~~~~~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~-~~~  167 (335)
T 3dls_A           89 ANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIA-EDF  167 (335)
T ss_dssp             TTBCCEEEEEECSSEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-TTS
T ss_pred             CCEeeEEEEEeeCCEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEc-CCC
Confidence            4788888888655 788999998 45 9999999988999999999999999999999999999999999999999 678


Q ss_pred             eeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           79 TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      .+++ +|||++...... .......+|+.|+|||++.+....+.++|+||||+++|+
T Consensus       168 ~~kL-~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~e  222 (335)
T 3dls_A          168 TIKL-IDFGSAAYLERG-KLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYT  222 (335)
T ss_dssp             CEEE-CCCTTCEECCTT-CCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHH
T ss_pred             cEEE-eecccceECCCC-CceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHH
Confidence            8999 899999876544 333456789999999999887755889999999999873

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=3.4e-31  Score=179.18  Aligned_cols=131  Identities=36%  Similarity=0.598  Sum_probs=114.2

Q ss_pred             ccchhhhccceec-ceeEEEeccCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNINLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++++++.+. ..++|||+++++|.+++..+ ..+++..+..++.|++.|+.|||+++++|+||||+||+++ ..+.
T Consensus        72 ~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~-~~~~  150 (346)
T 1ua2_A           72 PNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLD-ENGV  150 (346)
T ss_dssp             TTBCCEEEEECCTTCCEEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC-TTCC
T ss_pred             CCCCeEEEEEeeCCceEEEEEcCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEc-CCCC
Confidence            4788888887554 88999999999999999774 4689999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +++ +|||++..............+|+.|+|||++.+...++.++|+||||+++|
T Consensus       151 ~kl-~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~  204 (346)
T 1ua2_A          151 LKL-ADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILA  204 (346)
T ss_dssp             EEE-CCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHH
T ss_pred             EEE-EecccceeccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHH
Confidence            999 899999877655555566788999999999977665788999999999987

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.97  E-value=7.1e-31  Score=179.16  Aligned_cols=130  Identities=26%  Similarity=0.444  Sum_probs=109.9

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHhhCCccc
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYH----------------PMDSHLIKKFLYCILSGISYCHARKIIH   63 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~----------------~~~~~~~~~~~~~i~~~l~~lh~~~i~h   63 (135)
                      .|++++++++.++ ..|+||||+. ++|.+++....                .++...+..++.|++.|++|||+++++|
T Consensus       147 pnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH  226 (370)
T 2psq_A          147 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIH  226 (370)
T ss_dssp             TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             CCEeeEEEEEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence            4788888887544 8899999995 69999998643                4788999999999999999999999999


Q ss_pred             CCCCCcceeeecCCCeeEEecccccccccCCCCC--CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           64 RDLTTMNLLADIENKTVKIAADSGMAKEIDAPFD--AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        64 ~dl~~~nil~~~~~~~~~i~~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      |||||+||+++ ..+.+++ +|||++........  ......+++.|+|||++.+.. ++.++|+||||+++|
T Consensus       227 rDlkp~NIll~-~~~~~kl-~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~-~~~~~DvwslG~il~  296 (370)
T 2psq_A          227 RDLAARNVLVT-ENNVMKI-ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMW  296 (370)
T ss_dssp             SCCCGGGEEEC-TTCCEEE-CCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCC-CCHHHHHHHHHHHHH
T ss_pred             cccchhhEEEC-CCCCEEE-ccccCCcccCcccceecccCCCcccceECHhHhcCCC-CCcHHHHHHHHHHHH
Confidence            99999999999 6788999 89999986654322  233456678999999998776 788999999999987

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.97  E-value=7.8e-31  Score=175.92  Aligned_cols=129  Identities=17%  Similarity=0.336  Sum_probs=112.2

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++++.+... ..++|||++. ++|.+++.+ ..+++..+..++.|++.|+.|||+++++|+||||+||+++ ..+.
T Consensus       102 ~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~-~~~~  179 (321)
T 2c30_A          102 FNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ-VRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLT-LDGR  179 (321)
T ss_dssp             TTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC-TTCC
T ss_pred             CCcceEEEEEEECCEEEEEEecCCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC-CCCc
Confidence            4788888887554 7899999995 699998876 5799999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +++ +|||++..............+|+.|+|||++.+.. ++.++|+||||+++|
T Consensus       180 ~kl-~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slG~il~  232 (321)
T 2c30_A          180 VKL-SDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSL-YATEVDIWSLGIMVI  232 (321)
T ss_dssp             EEE-CCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCC-BCTHHHHHHHHHHHH
T ss_pred             EEE-eeeeeeeecccCccccccccCCccccCHhhhcCCC-CCchhhHHHHHHHHH
Confidence            999 89999987765544556678999999999997765 788999999999987

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.97  E-value=3.7e-31  Score=180.02  Aligned_cols=132  Identities=16%  Similarity=0.172  Sum_probs=110.0

Q ss_pred             ccchhhhcccee-----cceeEEEeccCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeec
Q 043346            2 QEMMKSMSLWVH-----KRENLVFEYVNINLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI   75 (135)
Q Consensus         2 ~~~~~~~~~~~~-----~~~~lv~e~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~   75 (135)
                      .|++++++++..     ...++|||+++++|.+++... +.+++..+..++.|++.||+|||+++++||||||+||+++.
T Consensus       108 ~~iv~~~~~~~~~~~~~~~~~lv~e~~g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~  187 (364)
T 3op5_A          108 LGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNY  187 (364)
T ss_dssp             CCSCCEEEEEEEEETTEEEEEEEEECEEEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEES
T ss_pred             CCCCeEEeeeeeccCCcceEEEEEeCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEec
Confidence            367777777644     247999999977999999875 67999999999999999999999999999999999999983


Q ss_pred             -CCCeeEEecccccccccCCCC-------CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           76 -ENKTVKIAADSGMAKEIDAPF-------DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        76 -~~~~~~i~~d~~~~~~~~~~~-------~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                       ..+.+++ +|||+++......       .......||+.|+|||++.+.. ++.++|+||||+++|.
T Consensus       188 ~~~~~~kl-~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~~l~e  253 (364)
T 3op5_A          188 KNPDQVYL-VDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVA-PSRRGDLEILGYCMIQ  253 (364)
T ss_dssp             SCTTCEEE-CCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCC-CCHHHHHHHHHHHHHH
T ss_pred             CCCCeEEE-EECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCC-CCchhhHHHHHHHHHH
Confidence             4578899 8999997654321       1224456999999999998776 7899999999999873

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.97  E-value=4.5e-31  Score=188.07  Aligned_cols=129  Identities=21%  Similarity=0.271  Sum_probs=110.9

Q ss_pred             ccchhhhccceec-ceeEEEecc-CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYV-NINLHKFIQQYH--PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN   77 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~   77 (135)
                      +|+++++..+.++ ..|+||||+ +++|.+++...+  .+++..+..++.|++.|+.|||++|++||||||+||+++ ..
T Consensus       244 p~Iv~l~~~~~~~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld-~~  322 (576)
T 2acx_A          244 RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLD-DH  322 (576)
T ss_dssp             TTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC-TT
T ss_pred             CCEeeEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEe-CC
Confidence            4677887777544 889999999 569999998744  499999999999999999999999999999999999999 67


Q ss_pred             CeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           78 KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +.+++ +|||++...... .......||+.|+|||++.+.. ++.++|+|||||++|
T Consensus       323 g~vKL-~DFGla~~~~~~-~~~~~~~GT~~Y~APEvl~~~~-~~~~~DiwSLGvily  376 (576)
T 2acx_A          323 GHIRI-SDLGLAVHVPEG-QTIKGRVGTVGYMAPEVVKNER-YTFSPDWWALGCLLY  376 (576)
T ss_dssp             SCEEE-CCCTTCEECCTT-CCEECCCSCGGGCCHHHHTTCE-ESSHHHHHHHHHHHH
T ss_pred             CCeEE-EecccceecccC-ccccccCCCccccCHHHHcCCC-CCccchHHHHHHHHH
Confidence            89999 899999876543 2334568999999999998766 788999999999997

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=2.9e-31  Score=178.06  Aligned_cols=130  Identities=18%  Similarity=0.351  Sum_probs=111.6

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecC-C
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE-N   77 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~-~   77 (135)
                      .|++++++.+.+. ..++|||+++ ++|.+++... ..+++..+..++.|++.|+.|||++|++||||||+||+++.. .
T Consensus        61 pnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~  140 (321)
T 1tki_A           61 RNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRS  140 (321)
T ss_dssp             TTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSC
T ss_pred             CCCCeEeEEEecCCEEEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCC
Confidence            4788888888655 8899999995 5999999764 479999999999999999999999999999999999999842 6


Q ss_pred             CeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           78 KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +.+++ +|||++...... .......+|+.|+|||++.+.. ++.++|+||+|+++|
T Consensus       141 ~~~kl-~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~  194 (321)
T 1tki_A          141 STIKI-IEFGQARQLKPG-DNFRLLFTAPEYYAPEVHQHDV-VSTATDMWSLGTLVY  194 (321)
T ss_dssp             CCEEE-CCCTTCEECCTT-CEEEEEESCGGGSCHHHHTTCE-ECHHHHHHHHHHHHH
T ss_pred             CCEEE-EECCCCeECCCC-CccccccCChhhcCcHHhcCCC-CCchhhHHHHHHHHH
Confidence            78899 899999876543 2334567899999999998765 688999999999987

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.97  E-value=1.3e-30  Score=176.92  Aligned_cols=129  Identities=23%  Similarity=0.324  Sum_probs=110.5

Q ss_pred             ccchhhhccceec-ceeEEEeccCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeec---
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNINLHKFIQQYH--PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI---   75 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~---   75 (135)
                      .|++++++.+... ..++|||+++++|.+++....  .+++..+..++.|++.||+|||+++++||||||+||+++.   
T Consensus        96 ~~iv~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~  175 (360)
T 3llt_A           96 NNIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYF  175 (360)
T ss_dssp             GGBCCEEEEEEETTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTC
T ss_pred             CCeecccceeeECCeeEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccc
Confidence            3788888887554 789999999889999998743  5899999999999999999999999999999999999973   


Q ss_pred             ---------------------CCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           76 ---------------------ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        76 ---------------------~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                                           ..+.+++ +|||++......   .....+|+.|+|||++.+.. ++.++|+|||||++|
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl-~DFG~a~~~~~~---~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~  250 (360)
T 3llt_A          176 EKSLITVRRVTDGKKIQIYRTKSTGIKL-IDFGCATFKSDY---HGSIINTRQYRAPEVILNLG-WDVSSDMWSFGCVLA  250 (360)
T ss_dssp             CEEEEEEECTTTCCEEEEEEESCCCEEE-CCCTTCEETTSC---CCSCCSCGGGCCHHHHTTCC-CCTTHHHHHHHHHHH
T ss_pred             cccccchhcccccccccccccCCCCEEE-EeccCceecCCC---CcCccCcccccCcHHHcCCC-CCCccchHHHHHHHH
Confidence                                 3678899 899999764432   34567899999999998776 788999999999987


Q ss_pred             C
Q 043346          135 W  135 (135)
Q Consensus       135 ~  135 (135)
                      .
T Consensus       251 e  251 (360)
T 3llt_A          251 E  251 (360)
T ss_dssp             H
T ss_pred             H
Confidence            3

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.97  E-value=7e-31  Score=175.01  Aligned_cols=131  Identities=28%  Similarity=0.562  Sum_probs=106.7

Q ss_pred             ccchhhhccceec-ceeEEEeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++++++.++ ..++|||++++ +|.+++...+.+++..+..++.|++.|+.|||++|++|+||+|+||+++ ..+.
T Consensus        62 ~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~-~~~~  140 (311)
T 4agu_A           62 PNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILIT-KHSV  140 (311)
T ss_dssp             TTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC-TTSC
T ss_pred             CCccchhheeecCCeEEEEEEeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEc-CCCC
Confidence            4788888888655 78999999975 7888887778899999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +++ +|||.+..............+++.|+|||++.+...++.++|+||+|+++|
T Consensus       141 ~kl-~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~  194 (311)
T 4agu_A          141 IKL-CDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFA  194 (311)
T ss_dssp             EEE-CCCTTCEECC------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHH
T ss_pred             EEE-eeCCCchhccCcccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHH
Confidence            999 899999877655455556688999999999987665789999999999987

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.97  E-value=1.8e-30  Score=171.94  Aligned_cols=131  Identities=16%  Similarity=0.198  Sum_probs=109.0

Q ss_pred             cchhhhccceec-ceeEEEeccCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC---
Q 043346            3 EMMKSMSLWVHK-RENLVFEYVNINLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN---   77 (135)
Q Consensus         3 ~~~~~~~~~~~~-~~~lv~e~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~---   77 (135)
                      +++++++++.++ ..+++||+++++|.+++... ..+++..+..++.|++.|+.|||+++++|+||||+||+++.+.   
T Consensus        67 ~i~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~  146 (298)
T 1csn_A           67 GIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKN  146 (298)
T ss_dssp             TCCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTT
T ss_pred             CCCeEEeecCCCceeEEEEEecCCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCC
Confidence            456666666554 78899999988999999874 4699999999999999999999999999999999999998322   


Q ss_pred             -CeeEEecccccccccCCCCC-------CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           78 -KTVKIAADSGMAKEIDAPFD-------AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        78 -~~~~i~~d~~~~~~~~~~~~-------~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                       ..+++ +|||++........       ......+|+.|+|||++.+.. ++.++|+||||+++|+
T Consensus       147 ~~~~kl-~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~il~e  210 (298)
T 1csn_A          147 ANMIYV-VDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGRE-QSRRDDLEALGHVFMY  210 (298)
T ss_dssp             TTCEEE-CCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCC-CCHHHHHHHHHHHHHH
T ss_pred             CCeEEE-EECccccccccccccccccccCccCCCCCcccCCchhhcCCC-CChHHHHHHHHHHHHH
Confidence             23899 89999987654322       235567899999999998776 7889999999999973

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.97  E-value=2e-30  Score=178.23  Aligned_cols=132  Identities=30%  Similarity=0.471  Sum_probs=109.9

Q ss_pred             ccchhhhccceec-------ceeEEEeccCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcc
Q 043346            2 QEMMKSMSLWVHK-------RENLVFEYVNINLHKFIQQ----YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMN   70 (135)
Q Consensus         2 ~~~~~~~~~~~~~-------~~~lv~e~~~~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~n   70 (135)
                      .|++++++++...       ..++||||+++++.+.+..    ...+++..+..++.|++.|+.|||++|++||||||+|
T Consensus        92 ~niv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~N  171 (394)
T 4e7w_A           92 PNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQN  171 (394)
T ss_dssp             TTBCCEEEEEEEESSSSSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred             CCcceEEEEEEecCCCCCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHH
Confidence            4778887777332       2789999998876665542    5689999999999999999999999999999999999


Q ss_pred             eeeecCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           71 LLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        71 il~~~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      |+++...+.+++ +|||+++..... .......+|+.|+|||++.+...++.++|+||+||++|.
T Consensus       172 ill~~~~~~~kL-~DFG~a~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~e  234 (394)
T 4e7w_A          172 LLLDPPSGVLKL-IDFGSAKILIAG-EPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAE  234 (394)
T ss_dssp             EEEETTTTEEEE-CCCTTCEECCTT-CCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHH
T ss_pred             EEEcCCCCcEEE-eeCCCcccccCC-CCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHH
Confidence            999866789999 899999876443 334456789999999999876668899999999999973

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.97  E-value=2.1e-31  Score=178.84  Aligned_cols=132  Identities=26%  Similarity=0.336  Sum_probs=113.0

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++++++.++ ..++|||+++ ++|.+++.....+++..+..++.|++.|++|||++|++|+||||+||+++ ..+.
T Consensus        65 pnIv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~-~~~~  143 (323)
T 3tki_A           65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDN  143 (323)
T ss_dssp             TTBCCEEEEEECSSEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-TTCC
T ss_pred             CCCCeEEEEEecCCeEEEEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEe-CCCC
Confidence            4788888888655 7789999995 59999998877899999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCC--CCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAP--FDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~--~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||++......  ........||+.|+|||++.+....+.++|+||||+++|.
T Consensus       144 ~kl-~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~  200 (323)
T 3tki_A          144 LKI-SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTA  200 (323)
T ss_dssp             EEE-CCCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHH
T ss_pred             EEE-EEeeccceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHH
Confidence            999 899999765322  2233456889999999999877655778999999999873

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.97  E-value=8.7e-31  Score=183.28  Aligned_cols=127  Identities=29%  Similarity=0.505  Sum_probs=103.4

Q ss_pred             ccchhhhccceec-------ceeEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeee
Q 043346            2 QEMMKSMSLWVHK-------RENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD   74 (135)
Q Consensus         2 ~~~~~~~~~~~~~-------~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~   74 (135)
                      +||+++++.+...       ..|+|||+++++|.+.+..  .+++..+..++.|++.|++|||++|++||||||+||+++
T Consensus       121 pnIv~l~~~~~~~~~~~~~~~~~lv~E~~~~~l~~~~~~--~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~  198 (464)
T 3ttj_A          121 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK  198 (464)
T ss_dssp             TTBCCCSEEECSCCSTTTCCEEEEEEECCSEEHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC
T ss_pred             CCCCcEEEEEccCCccccCCeEEEEEeCCCCCHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEe
Confidence            4788888877432       4699999999888888754  489999999999999999999999999999999999999


Q ss_pred             cCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           75 IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        75 ~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                       ..+.+++ +|||+++..... .......+|+.|+|||++.+.. ++.++|+||+||++|
T Consensus       199 -~~~~~kl-~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~  254 (464)
T 3ttj_A          199 -SDCTLKI-LDFGLARTAGTS-FMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMG  254 (464)
T ss_dssp             -TTSCEEE-CCCCCC-----C-CCC----CCCTTCCHHHHTTCC-CCTTHHHHHHHHHHH
T ss_pred             -CCCCEEE-EEEEeeeecCCC-cccCCCcccccccCHHHHcCCC-CCHHHHHHHHHHHHH
Confidence             6788999 899999866443 3345578899999999998876 788999999999987

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.97  E-value=1.1e-30  Score=176.91  Aligned_cols=131  Identities=27%  Similarity=0.336  Sum_probs=103.3

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeec--CC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI--EN   77 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~--~~   77 (135)
                      .|++++++++..+ ..++|||++. ++|.+++...+.+++..+..++.|++.|+.|||+++++|+||||+||+++.  ..
T Consensus       108 ~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~  187 (349)
T 2w4o_A          108 PNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPD  187 (349)
T ss_dssp             TTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTT
T ss_pred             CCCcceeeeEecCCeEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCC
Confidence            4788888888655 7899999995 699999998888999999999999999999999999999999999999973  36


Q ss_pred             CeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           78 KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +.+++ +|||++...... .......+|+.|+|||++.+.. ++.++|+||||+++|+
T Consensus       188 ~~~kl-~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~e  242 (349)
T 2w4o_A          188 APLKI-ADFGLSKIVEHQ-VLMKTVCGTPGYCAPEILRGCA-YGPEVDMWSVGIITYI  242 (349)
T ss_dssp             CCEEE-CCCC-----------------CGGGSCHHHHTTCC-CCTHHHHHHHHHHHHH
T ss_pred             CCEEE-ccCccccccCcc-cccccccCCCCccCHHHhcCCC-CCcccchHHHHHHHHH
Confidence            78899 899999865433 2334567899999999998766 7889999999999873

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=1.3e-30  Score=177.02  Aligned_cols=132  Identities=23%  Similarity=0.327  Sum_probs=110.0

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|+++++..+... ..++||||++ ++|.+++...+.+++..+..++.|++.||.|||+++++||||||+||+++ ..+.
T Consensus       119 ~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~-~~~~  197 (355)
T 1vzo_A          119 PFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLD-SNGH  197 (355)
T ss_dssp             TTBCCEEEEEEETTEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC-TTSC
T ss_pred             CceeEEEEEEeeCceEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC-CCCc
Confidence            3677777777554 7899999995 69999999888899999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCC-CCCCCCcccccccCcccccCC-CCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPF-DAHTTEMVILRYRAPKILFGR-TNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~-~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||+++...... .......+|+.|+|||++.+. ...+.++|+||||+++|.
T Consensus       198 ~kl-~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~e  254 (355)
T 1vzo_A          198 VVL-TDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYE  254 (355)
T ss_dssp             EEE-SCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHH
T ss_pred             EEE-eeCCCCeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHH
Confidence            999 8999998654332 223456789999999999763 336789999999999873

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.97  E-value=5.8e-31  Score=177.99  Aligned_cols=131  Identities=16%  Similarity=0.159  Sum_probs=110.5

Q ss_pred             ccchhhhcccee-----cceeEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecC
Q 043346            2 QEMMKSMSLWVH-----KRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE   76 (135)
Q Consensus         2 ~~~~~~~~~~~~-----~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~   76 (135)
                      .|++++++++..     ...++|||+++++|.+++...+.+++..+..++.|++.|++|||+++++||||||+||+++. 
T Consensus       108 ~ni~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~-  186 (345)
T 2v62_A          108 LGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGY-  186 (345)
T ss_dssp             CCCCCEEEEEEEESSSCEEEEEEEECEEEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEES-
T ss_pred             cCcceeecccccccCCCcEEEEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEcc-
Confidence            367777777644     47899999997799999988778999999999999999999999999999999999999983 


Q ss_pred             CC--eeEEecccccccccCCCC-------CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           77 NK--TVKIAADSGMAKEIDAPF-------DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        77 ~~--~~~i~~d~~~~~~~~~~~-------~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      .+  .+++ +|||+++......       .......+|+.|+|||++.+.. ++.++|+||||+++|+
T Consensus       187 ~~~~~~kL-~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~il~e  252 (345)
T 2v62_A          187 KNPDQVYL-ADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVA-LSRRSDVEILGYCMLR  252 (345)
T ss_dssp             SSTTSEEE-CCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCC-CCHHHHHHHHHHHHHH
T ss_pred             CCCCcEEE-EeCCCceecccccccccchhccccccCCCccccCHHHhcCCC-CCchhhHHHHHHHHHH
Confidence            44  8899 8999997664221       1224567899999999998775 7889999999999973

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.97  E-value=7.4e-31  Score=176.18  Aligned_cols=131  Identities=18%  Similarity=0.248  Sum_probs=110.1

Q ss_pred             ccchhhhccceecceeEEEeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHKRENLVFEYVN-INLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++++++.++..++|||++. ++|.+++... +.+++..+..++.|++.|+.|||+++++||||||+||+++ ..+.
T Consensus        75 ~~iv~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~-~~~~  153 (325)
T 3kex_A           75 AHIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLK-SPSQ  153 (325)
T ss_dssp             TTBCCEEEEECBSSEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEES-SSSC
T ss_pred             CCcCeEEEEEcCCccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEEC-CCCe
Confidence            47888999888888999999995 6999999873 5789999999999999999999999999999999999998 6788


Q ss_pred             eEEecccccccccCCCCC--CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFD--AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||++........  ......+++.|+|||++.+.. ++.++|+||||+++|.
T Consensus       154 ~kl-~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~e  209 (325)
T 3kex_A          154 VQV-ADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGK-YTHQSDVWSYGVTVWE  209 (325)
T ss_dssp             EEE-CSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCC-CCHHHHHHHHHHHHHH
T ss_pred             EEE-CCCCcccccCcccccccccCCCCcccccChHHhccCC-CChhhHhHHhHHHHHH
Confidence            999 89999987654322  234456777999999997766 7889999999999873

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.97  E-value=2.5e-30  Score=174.23  Aligned_cols=131  Identities=22%  Similarity=0.338  Sum_probs=114.8

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++++++.+. ..+++||+++ ++|.+++...+.+++..+..++.|++.|+.|||+++++|+||+|+||+++ ..+.
T Consensus       101 ~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~-~~~~  179 (335)
T 2owb_A          101 QHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN-EDLE  179 (335)
T ss_dssp             TTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC-TTCC
T ss_pred             CCCCeEEEEEecCCeEEEEEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEc-CCCC
Confidence            4788888888655 7899999996 69999998888899999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||++..............+++.|+|||++.+.. .+.++|+||||+++|+
T Consensus       180 ~kl-~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~il~~  233 (335)
T 2owb_A          180 VKI-GDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKG-HSFEVDVWSIGCIMYT  233 (335)
T ss_dssp             EEE-CCCTTCEECCSTTCCBCCCCSCCSSCCHHHHHTSC-BCTHHHHHHHHHHHHH
T ss_pred             EEE-eeccCceecccCcccccccCCCccccCHHHhccCC-CCchhhHHHHHHHHHH
Confidence            999 89999987765444555677899999999998766 6789999999999873

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.97  E-value=9.8e-31  Score=174.59  Aligned_cols=131  Identities=20%  Similarity=0.318  Sum_probs=103.8

Q ss_pred             ccchhhhccceec-c----eeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeec
Q 043346            2 QEMMKSMSLWVHK-R----ENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI   75 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~----~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~   75 (135)
                      .|++++++.+... .    .|+|||+++ ++|.+++...+.+++..+..++.|++.|+.|||+++++|+||||+||+++ 
T Consensus        72 p~iv~~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~-  150 (311)
T 3ork_A           72 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS-  150 (311)
T ss_dssp             TTBCCEEEEEEEEETTEEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-
T ss_pred             CCcceEEEeeeccCCCCcccEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEc-
Confidence            4678888777443 2    389999995 69999999888999999999999999999999999999999999999999 


Q ss_pred             CCCeeEEecccccccccCCCC---CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           76 ENKTVKIAADSGMAKEIDAPF---DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        76 ~~~~~~i~~d~~~~~~~~~~~---~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ..+.+++ +|||++.......   .......||+.|+|||++.+.. ++.++|+||||+++|.
T Consensus       151 ~~~~~kl-~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~~l~~  211 (311)
T 3ork_A          151 ATNAVKV-MDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS-VDARSDVYSLGCVLYE  211 (311)
T ss_dssp             TTSCEEE-CCCSCC------------------CCTTCCHHHHHTCC-CCHHHHHHHHHHHHHH
T ss_pred             CCCCEEE-eeccCcccccccccccccccccCcCcccCCHHHhcCCC-CCchHhHHHHHHHHHH
Confidence            6788999 8999998664332   2233456899999999998776 7889999999999973

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.97  E-value=1.1e-30  Score=176.56  Aligned_cols=130  Identities=18%  Similarity=0.365  Sum_probs=105.8

Q ss_pred             ccchhhhccceec-ceeEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      .|++++++++..+ ..++|||+.+++|.+++.+.+.+++..+..++.|++.|+.|||+++++||||||+||+++  .+.+
T Consensus        69 ~~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~--~~~~  146 (343)
T 3dbq_A           69 DKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV--DGML  146 (343)
T ss_dssp             TTBCCEEEEEECSSEEEEEECCCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE--TTEE
T ss_pred             CceEEEeeeEeeCCEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE--CCcE
Confidence            4688888888555 788999977889999999988999999999999999999999999999999999999997  4679


Q ss_pred             EEecccccccccCCCCC--CCCCCcccccccCcccccC----------CCCCCchhHHHHhhhhhh
Q 043346           81 KIAADSGMAKEIDAPFD--AHTTEMVILRYRAPKILFG----------RTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~----------~~~~~~~~D~wslg~il~  134 (135)
                      ++ +|||++........  ......||+.|+|||++.+          ...++.++|+||||+++|
T Consensus       147 kl-~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~  211 (343)
T 3dbq_A          147 KL-IDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY  211 (343)
T ss_dssp             EE-CCCSSSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHH
T ss_pred             EE-eecccccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHH
Confidence            99 89999987654322  2345678999999999854          133788999999999987

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.97  E-value=3.5e-30  Score=176.30  Aligned_cols=118  Identities=28%  Similarity=0.545  Sum_probs=102.3

Q ss_pred             ceeEEEeccCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEeccccccc
Q 043346           15 RENLVFEYVNINLHKFIQQ----YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAK   90 (135)
Q Consensus        15 ~~~lv~e~~~~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~   90 (135)
                      ..++|||+++++|.+.+..    +..+++..+..++.|++.|+.|||++|++||||||+||+++...+.+++ +|||++.
T Consensus       112 ~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi~H~Dikp~Nil~~~~~~~~kl-~Dfg~a~  190 (383)
T 3eb0_A          112 YLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKL-CDFGSAK  190 (383)
T ss_dssp             EEEEEECCCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEETTTTEEEE-CCCTTCE
T ss_pred             EEEEEEecCCccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCcCccCccCHHHEEEcCCCCcEEE-EECCCCc
Confidence            3789999999888777753    5689999999999999999999999999999999999999866789999 8999998


Q ss_pred             ccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           91 EIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ..... .......+|+.|+|||++.+...++.++|+||+||++|
T Consensus       191 ~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~  233 (383)
T 3eb0_A          191 KLIPS-EPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFG  233 (383)
T ss_dssp             ECCTT-SCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHH
T ss_pred             ccCCC-CCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHH
Confidence            66444 33445678999999999987666889999999999987

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.97  E-value=4.2e-30  Score=170.19  Aligned_cols=131  Identities=22%  Similarity=0.338  Sum_probs=114.5

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++++++.++ ..+++||+++ ++|.+++...+.+++..+..++.|++.|+.+||+++++|+||+|+||+++ ..+.
T Consensus        75 ~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~-~~~~  153 (294)
T 2rku_A           75 QHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN-EDLE  153 (294)
T ss_dssp             TTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC-TTCC
T ss_pred             CCEeeeeeeeccCCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEc-CCCC
Confidence            4788888888655 7889999996 69999998888899999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||.+..............+++.|+|||++.+.. .+.++|+||+|+++|+
T Consensus       154 ~kl-~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~~  207 (294)
T 2rku_A          154 VKI-GDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKG-HSFEVDVWSIGCIMYT  207 (294)
T ss_dssp             EEE-CCCTTCEECCSTTCCBCCCCSCCSSCCHHHHTTSC-BCTHHHHHHHHHHHHH
T ss_pred             EEE-EeccCceecccCccccccccCCCCcCCcchhccCC-CCchhhHHHHHHHHHH
Confidence            999 89999987765444455667899999999997765 6789999999999873

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.97  E-value=3.9e-30  Score=176.08  Aligned_cols=130  Identities=27%  Similarity=0.461  Sum_probs=110.6

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHhhCCccc
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYH----------------PMDSHLIKKFLYCILSGISYCHARKIIH   63 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~----------------~~~~~~~~~~~~~i~~~l~~lh~~~i~h   63 (135)
                      .|++++++++.++ ..++|||+++ ++|.+++....                .+++..+..++.|++.|++|||+++++|
T Consensus       135 pnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH  214 (382)
T 3tt0_A          135 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIH  214 (382)
T ss_dssp             TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             chhhhheeeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEec
Confidence            4788888888555 7899999995 59999998743                4899999999999999999999999999


Q ss_pred             CCCCCcceeeecCCCeeEEecccccccccCCCC--CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           64 RDLTTMNLLADIENKTVKIAADSGMAKEIDAPF--DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        64 ~dl~~~nil~~~~~~~~~i~~d~~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      |||||+||+++ ..+.+++ +|||++.......  .......+++.|+|||++.+.. ++.++|+||||+++|
T Consensus       215 ~Dlkp~NIll~-~~~~~kL-~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~-~~~~~DiwslG~il~  284 (382)
T 3tt0_A          215 RDLAARNVLVT-EDNVMKI-ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI-YTHQSDVWSFGVLLW  284 (382)
T ss_dssp             SCCCGGGEEEC-TTCCEEE-CSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCC-CCHHHHHHHHHHHHH
T ss_pred             CCCCcceEEEc-CCCcEEE-cccCcccccccccccccccCCCCCcceeCHHHhcCCC-CCchhHHHHHHHHHH
Confidence            99999999999 6688999 8999998765432  2234456688999999998766 788999999999987

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.97  E-value=1.7e-30  Score=178.35  Aligned_cols=131  Identities=18%  Similarity=0.361  Sum_probs=107.5

Q ss_pred             ccchhhhccceec-ceeEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      .|++++++++..+ ..++|||+.+++|.+++.+...+++..+..++.|++.||.|||+++++||||||+||+++  .+.+
T Consensus       116 ~~iv~~~~~~~~~~~~~lv~E~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~--~~~~  193 (390)
T 2zmd_A          116 DKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV--DGML  193 (390)
T ss_dssp             TTBCCEEEEEECSSEEEEEEECCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES--SSCE
T ss_pred             CeEEEEEEEEecCCEEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE--CCeE
Confidence            4788888877544 789999966789999999888899999999999999999999999999999999999996  3679


Q ss_pred             EEecccccccccCCCCC--CCCCCcccccccCcccccCC----------CCCCchhHHHHhhhhhhC
Q 043346           81 KIAADSGMAKEIDAPFD--AHTTEMVILRYRAPKILFGR----------TNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~----------~~~~~~~D~wslg~il~~  135 (135)
                      ++ +|||++........  ......||+.|+|||++.+.          ..++.++|+|||||++|.
T Consensus       194 kl-~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~e  259 (390)
T 2zmd_A          194 KL-IDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYY  259 (390)
T ss_dssp             EE-CCCSSSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHH
T ss_pred             EE-EecCccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHH
Confidence            99 89999987654322  23456799999999999652          237789999999999973

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.97  E-value=3.1e-30  Score=178.56  Aligned_cols=131  Identities=25%  Similarity=0.480  Sum_probs=108.5

Q ss_pred             ccchhhhcccee-------cceeEEEeccCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcc
Q 043346            2 QEMMKSMSLWVH-------KRENLVFEYVNINLHKFIQQ----YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMN   70 (135)
Q Consensus         2 ~~~~~~~~~~~~-------~~~~lv~e~~~~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~n   70 (135)
                      .|++++++++..       ...++||||+++++.+.+..    ...+++..+..++.|++.||.|||+++++||||||+|
T Consensus       107 pniv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~N  186 (420)
T 1j1b_A          107 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQN  186 (420)
T ss_dssp             TTBCCEEEEEEEEETTTTEEEEEEEEECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGG
T ss_pred             CCccceeeEEeccCCCCcceeEEeehhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhh
Confidence            467787776632       13679999998887776653    4679999999999999999999999999999999999


Q ss_pred             eeeecCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           71 LLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        71 il~~~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      |+++.+.+.+|+ +|||+++..... .......+|+.|+|||++.+...++.++|+||+||++|
T Consensus       187 ILl~~~~~~~kl-~DFG~a~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~  248 (420)
T 1j1b_A          187 LLLDPDTAVLKL-CDFGSAKQLVRG-EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLA  248 (420)
T ss_dssp             EEEETTTTEEEE-CCCTTCEECCTT-CCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHH
T ss_pred             EEEeCCCCeEEe-ccchhhhhcccC-CCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHH
Confidence            999966677899 899999876443 23345678999999999987655889999999999997

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.97  E-value=3.6e-30  Score=174.27  Aligned_cols=131  Identities=25%  Similarity=0.500  Sum_probs=110.1

Q ss_pred             ccchhhhcccee---------cceeEEEeccCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcce
Q 043346            2 QEMMKSMSLWVH---------KRENLVFEYVNINLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNL   71 (135)
Q Consensus         2 ~~~~~~~~~~~~---------~~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~ni   71 (135)
                      .|++++++++..         +..++|||+++++|.+.+.. ...+++..+..++.|++.|+.|||++|++|+||||+||
T Consensus        76 ~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NI  155 (351)
T 3mi9_A           76 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANV  155 (351)
T ss_dssp             TTBCCEEEEEEEC--------CEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGE
T ss_pred             CCcccHhheeeccccccccCCceEEEEEeccCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHE
Confidence            367777776643         35789999999998888876 35799999999999999999999999999999999999


Q ss_pred             eeecCCCeeEEecccccccccCCC----CCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           72 LADIENKTVKIAADSGMAKEIDAP----FDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        72 l~~~~~~~~~i~~d~~~~~~~~~~----~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +++ ..+.+++ +|||++......    ........+|+.|+|||++.+...++.++|+||||+++|
T Consensus       156 l~~-~~~~~kl-~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~  220 (351)
T 3mi9_A          156 LIT-RDGVLKL-ADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMA  220 (351)
T ss_dssp             EEC-TTSCEEE-CCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHH
T ss_pred             EEc-CCCCEEE-ccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHH
Confidence            999 6788999 899999866422    122345678999999999987665789999999999987

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.97  E-value=1.2e-30  Score=178.93  Aligned_cols=130  Identities=20%  Similarity=0.320  Sum_probs=110.5

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeec-CC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI-EN   77 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~-~~   77 (135)
                      .|++++++.+.++ ..++|||++. ++|.+++... ..+++..+..++.|++.|++|||+++++||||||+||+++. ..
T Consensus       108 pnIv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~  187 (387)
T 1kob_A          108 PKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKA  187 (387)
T ss_dssp             TTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTC
T ss_pred             cCCCeEEEEEEeCCEEEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCC
Confidence            4788888888555 8899999995 6999999764 47899999999999999999999999999999999999974 34


Q ss_pred             CeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           78 KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +.+++ +|||++...... .......+|+.|+|||++.+.. ++.++|+|||||++|
T Consensus       188 ~~vkL-~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~  241 (387)
T 1kob_A          188 SSVKI-IDFGLATKLNPD-EIVKVTTATAEFAAPEIVDREP-VGFYTDMWAIGVLGY  241 (387)
T ss_dssp             CCEEE-CCCTTCEECCTT-SCEEEECSSGGGCCHHHHTTCC-BCHHHHHHHHHHHHH
T ss_pred             CceEE-EecccceecCCC-cceeeeccCCCccCchhccCCC-CCCcccEeeHhHHHH
Confidence            67899 899999876543 2334457899999999998765 788999999999987

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.97  E-value=2.4e-30  Score=173.99  Aligned_cols=131  Identities=32%  Similarity=0.605  Sum_probs=105.9

Q ss_pred             ccchhhhccceec-ceeEEEeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++++++.+. ..++|||++++ +|.++....+.+++..+..++.|++.|+.+||++|++|+||+|+||+++ ..+.
T Consensus        84 ~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~-~~~~  162 (331)
T 4aaa_A           84 ENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVS-QSGV  162 (331)
T ss_dssp             TTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC-TTSC
T ss_pred             CCEeeEEEEeecCCEEEEEEecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEc-CCCc
Confidence            4788888888655 78999999976 6766666677899999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +++ +|||++..............+++.|+|||++.+...++.++|+||+|+++|
T Consensus       163 ~kl-~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~  216 (331)
T 4aaa_A          163 VKL-CDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVT  216 (331)
T ss_dssp             EEE-CCCTTC------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHH
T ss_pred             EEE-EeCCCceeecCCccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHH
Confidence            999 899999876655445556678999999999987655788999999999987

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.97  E-value=5.2e-30  Score=171.80  Aligned_cols=117  Identities=18%  Similarity=0.337  Sum_probs=98.4

Q ss_pred             eeEEEeccC-CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEecccccccc
Q 043346           16 ENLVFEYVN-INLHKFIQQYH---PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKE   91 (135)
Q Consensus        16 ~~lv~e~~~-~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~   91 (135)
                      .+++||+++ ++|.+++....   ..++..+..++.|++.|+.|||+++++||||||+||+++ ..+.+++ +|||++..
T Consensus       136 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~-~~~~~kL-~DfG~a~~  213 (332)
T 3qd2_B          136 LYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFT-MDDVVKV-GDFGLVTA  213 (332)
T ss_dssp             EEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC-TTCCEEE-CCCTTCEE
T ss_pred             EEEEEEecCCCCHHHHHhcccCccchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEe-CCCCEEE-eecCcccc
Confidence            789999995 59999998744   345667899999999999999999999999999999999 6788999 89999987


Q ss_pred             cCCCC------------CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           92 IDAPF------------DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        92 ~~~~~------------~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      .....            .......+|+.|+|||++.+.. ++.++|+||+|+++|.
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~il~e  268 (332)
T 3qd2_B          214 MDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNN-YSHKVDIFSLGLILFE  268 (332)
T ss_dssp             CSCC--------------CCCSCC-CGGGSCHHHHHCCC-CCTHHHHHHHHHHHHH
T ss_pred             cccchhhccccccccccccccccCCCcCccChHHhcCCC-CcchhhHHHHHHHHHH
Confidence            65442            2234567899999999998776 7889999999999873

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.97  E-value=1.5e-30  Score=171.39  Aligned_cols=130  Identities=18%  Similarity=0.364  Sum_probs=100.9

Q ss_pred             ccchhhhccceecceeEEEeccC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHKRENLVFEYVN-INLHKFIQQYH-PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++++++.++..++|||+++ ++|.+++...+ .+++..+..++.|++.|+.+||+++++|+||||+||+++ .++.
T Consensus        76 ~~iv~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~-~~~~  154 (281)
T 1mp8_A           76 PHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS-SNDC  154 (281)
T ss_dssp             TTBCCEEEEECSSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE-ETTE
T ss_pred             CccceEEEEEccCccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEEC-CCCC
Confidence            47888888888888999999996 49999998643 689999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCC-CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFD-AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +++ +|||++........ ......+++.|+|||++.+.. ++.++|+||||+++|
T Consensus       155 ~kl-~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~  208 (281)
T 1mp8_A          155 VKL-GDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR-FTSASDVWMFGVCMW  208 (281)
T ss_dssp             EEE-CC-------------------CCGGGCCHHHHHHCC-CSHHHHHHHHHHHHH
T ss_pred             EEE-CccccccccCcccccccccCCCcccccChhhcccCC-CCCccCchHHHHHHH
Confidence            999 89999987644322 223345677899999997665 788999999999987

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.97  E-value=3.5e-30  Score=172.55  Aligned_cols=131  Identities=24%  Similarity=0.362  Sum_probs=111.7

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC-
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK-   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~-   78 (135)
                      .|++++++++.+. ..++|||++. ++|.+++...+.+++..+..++.|++.|+.|||+++++|+||+|+||+++.++. 
T Consensus        75 ~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~  154 (321)
T 2a2a_A           75 HNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIP  154 (321)
T ss_dssp             TTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSS
T ss_pred             CCcceEEEEEecCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCC
Confidence            4678888887555 7899999994 699999998888999999999999999999999999999999999999984432 


Q ss_pred             --eeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           79 --TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        79 --~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                        .+++ +|||++...... .......+|+.|+|||++.+.. ++.++|+||||+++|+
T Consensus       155 ~~~~kl-~Dfg~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~il~~  210 (321)
T 2a2a_A          155 IPHIKL-IDFGLAHEIEDG-VEFKNIFGTPEFVAPEIVNYEP-LGLEADMWSIGVITYI  210 (321)
T ss_dssp             SCCEEE-CCCTTCEECCTT-CCCCCCCSCGGGCCHHHHTTCC-CCTHHHHHHHHHHHHH
T ss_pred             cCCEEE-ccCccceecCcc-ccccccCCCCCccCcccccCCC-CCCccccHHHHHHHHH
Confidence              6899 899999876544 2334557899999999998766 7889999999999873

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=4.4e-30  Score=175.08  Aligned_cols=127  Identities=28%  Similarity=0.523  Sum_probs=109.7

Q ss_pred             ccchhhhccceec-------ceeEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeee
Q 043346            2 QEMMKSMSLWVHK-------RENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD   74 (135)
Q Consensus         2 ~~~~~~~~~~~~~-------~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~   74 (135)
                      .|++++++++...       ..|+|||+++++|.+++.. +.+++..+..++.|++.|++|||++|++||||||+||+++
T Consensus        84 pnIv~l~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~  162 (367)
T 1cm8_A           84 ENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKH-EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVN  162 (367)
T ss_dssp             TTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC
T ss_pred             cCCCCceeeEecCCccccCceEEEEEecCCCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEc
Confidence            4778888777543       3599999998899999987 6799999999999999999999999999999999999999


Q ss_pred             cCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           75 IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        75 ~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                       .++.+++ +|||+++.....   .....+|+.|+|||++.+...++.++|+||+||++|
T Consensus       163 -~~~~~kl-~Dfg~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~  217 (367)
T 1cm8_A          163 -EDCELKI-LDFGLARQADSE---MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMA  217 (367)
T ss_dssp             -TTCCEEE-CCCTTCEECCSS---CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHH
T ss_pred             -CCCCEEE-Eeeecccccccc---cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHH
Confidence             6788999 899999875432   345678999999999987555888999999999987

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.97  E-value=1.1e-30  Score=180.72  Aligned_cols=131  Identities=24%  Similarity=0.349  Sum_probs=104.7

Q ss_pred             ccchhhhccceecceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecC--CC
Q 043346            2 QEMMKSMSLWVHKRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE--NK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~--~~   78 (135)
                      .|++++++++..+..++|||++. ++|.+++..++.+++..+..++.|++.|++|||+++++||||||+||+++..  ..
T Consensus       200 pniv~l~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~  279 (419)
T 3i6u_A          200 PCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDC  279 (419)
T ss_dssp             TTBCCCCEEEESSEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSC
T ss_pred             CCEeeEEEEEecCceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcc
Confidence            47888999888778999999995 6999999888889999999999999999999999999999999999999733  23


Q ss_pred             eeEEecccccccccCCCCCCCCCCcccccccCcccccC--CCCCCchhHHHHhhhhhh
Q 043346           79 TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFG--RTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~--~~~~~~~~D~wslg~il~  134 (135)
                      .+++ +|||++...... .......||+.|+|||++.+  ...++.++|+||+|+++|
T Consensus       280 ~~kl-~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~  335 (419)
T 3i6u_A          280 LIKI-TDFGHSKILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF  335 (419)
T ss_dssp             CEEE-CCSSTTTSCC------------CTTCCTTTTC----CTTHHHHHHHHHHHHHH
T ss_pred             eEEE-eecccceecCCC-ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHH
Confidence            5899 899999876443 33445678999999999854  333678999999999987

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.97  E-value=3.7e-30  Score=178.56  Aligned_cols=126  Identities=25%  Similarity=0.420  Sum_probs=108.6

Q ss_pred             cchhhhccceec-ceeEEEeccCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            3 EMMKSMSLWVHK-RENLVFEYVNINLHKFIQQYH--PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         3 ~~~~~~~~~~~~-~~~lv~e~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      |++++++.+... ..+++||+++++|.+++....  .+++..+..++.|++.||+|||+++++||||||+||+++ ..+.
T Consensus       160 ~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~-~~~~  238 (429)
T 3kvw_A          160 NVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLK-QQGR  238 (429)
T ss_dssp             CBCCEEEEEEETTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEES-STTS
T ss_pred             CEEEEEeecccCCeEEEEEeccCCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEc-cCCC
Confidence            778888887544 789999999999999998743  589999999999999999999999999999999999999 4444


Q ss_pred             --eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 --VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 --~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                        +++ +|||++......   .....+|+.|+|||++.+.. ++.++|+|||||++|
T Consensus       239 ~~vkL-~DFG~a~~~~~~---~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~  290 (429)
T 3kvw_A          239 SGIKV-IDFGSSCYEHQR---VYTYIQSRFYRAPEVILGAR-YGMPIDMWSLGCILA  290 (429)
T ss_dssp             CCEEE-CCCTTCEETTCC---CCSSCSCGGGCCHHHHHTBC-CCTHHHHHHHHHHHH
T ss_pred             cceEE-eecccceecCCc---ccccCCCCCccChHHHhCCC-CCchHHHHhHHHHHH
Confidence              899 899998754332   34567899999999998876 788999999999997

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.97  E-value=6.2e-30  Score=173.32  Aligned_cols=127  Identities=20%  Similarity=0.336  Sum_probs=109.2

Q ss_pred             ccchhhhccceec-ceeEEEeccCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNINLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++++++.++ ..++|||++.|+|.+.+.. ...+++..+..++.|++.|+.|||+++++|+||||+||+++ ..+.
T Consensus       114 pniv~~~~~~~~~~~~~lv~e~~~g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~-~~~~  192 (348)
T 1u5q_A          114 PNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS-EPGL  192 (348)
T ss_dssp             TTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEE-TTTE
T ss_pred             CCEeeEEEEEEECCeEEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEC-CCCC
Confidence            4788888888555 7899999999999998864 56799999999999999999999999999999999999999 7789


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccC--CCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFG--RTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~--~~~~~~~~D~wslg~il~  134 (135)
                      +++ +|||++.....    .....+|+.|+|||++.+  ...++.++|+||||+++|
T Consensus       193 ~kL-~DfG~a~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~  244 (348)
T 1u5q_A          193 VKL-GDFGSASIMAP----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI  244 (348)
T ss_dssp             EEE-CCCTTCBSSSS----BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHH
T ss_pred             EEE-eeccCceecCC----CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHH
Confidence            999 89999876533    234678999999999853  333678999999999987

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.97  E-value=4.5e-30  Score=169.04  Aligned_cols=128  Identities=21%  Similarity=0.334  Sum_probs=107.9

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeec
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQY----HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI   75 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~   75 (135)
                      .|++++++++.++ ..++|||+++ ++|.+++.+.    +.+++..+..++.|++.|+.|||+++++|+||||+||+++.
T Consensus        71 ~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~  150 (289)
T 1x8b_A           71 SHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISR  150 (289)
T ss_dssp             TTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-
T ss_pred             CCeeeeeeeeecCCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcC
Confidence            4788888888655 7889999995 5999999864    67899999999999999999999999999999999999983


Q ss_pred             ------------------CCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           76 ------------------ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        76 ------------------~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                                        ....+++ +|||.+......    ....+++.|+|||++.+....++++|+||||+++|
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~kl-~Dfg~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~  222 (289)
T 1x8b_A          151 TSIPNAASEEGDEDDWASNKVMFKI-GDLGHVTRISSP----QVEEGDSRFLANEVLQENYTHLPKADIFALALTVV  222 (289)
T ss_dssp             -------------------CCCEEE-CCCTTCEETTCS----CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHH
T ss_pred             CCCCcccccccccccccCCceEEEE-cccccccccCCc----cccCCCccccChhHhcCCCCCCchhhHHHHHHHHH
Confidence                              2236788 899998876543    23458899999999987755678999999999987

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.97  E-value=2.8e-30  Score=173.51  Aligned_cols=130  Identities=20%  Similarity=0.336  Sum_probs=110.2

Q ss_pred             ccchhhhccceecceeEEEecc-CCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHKRENLVFEYV-NINLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++++++.++..++++|++ +++|.+++.+ .+.+++..+..++.|++.|+.|||+++++||||||+||+++ ..+.
T Consensus        77 ~~iv~~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~-~~~~  155 (327)
T 3poz_A           77 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK-TPQH  155 (327)
T ss_dssp             TTBCCEEEEEESSSEEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE-ETTE
T ss_pred             CCEeEEEEEEecCCeEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEEC-CCCC
Confidence            4788899998888889999999 5799999987 46799999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCC--CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFD--AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +++ +|||+++.......  ......+|+.|+|||.+.+.. ++.++|+||||+++|
T Consensus       156 ~kl-~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~-~~~~~Di~slG~il~  210 (327)
T 3poz_A          156 VKI-TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYGVTVW  210 (327)
T ss_dssp             EEE-CCTTHHHHHTTTCC-------CCCGGGSCHHHHHHCC-CCHHHHHHHHHHHHH
T ss_pred             EEE-ccCcceeEccCCcccccccCCCccccccChHHhccCC-CCchhhhhhhHHHHH
Confidence            999 89999987654322  223345678999999998766 788999999999987

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.97  E-value=5.7e-31  Score=179.89  Aligned_cols=114  Identities=16%  Similarity=0.245  Sum_probs=97.1

Q ss_pred             eeEEEeccCCCHHHHHHhcCCCCH-------HHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEeccccc
Q 043346           16 ENLVFEYVNINLHKFIQQYHPMDS-------HLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGM   88 (135)
Q Consensus        16 ~~lv~e~~~~~L~~~~~~~~~~~~-------~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~   88 (135)
                      .|++||+++|+|.+++.+.+.+++       ..+..++.|++.||+|||+++++||||||+||+++ ..+.+++ +|||+
T Consensus       175 ~~lv~E~~~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~-~~~~~kL-~DFG~  252 (377)
T 3byv_A          175 RFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLD-QRGGVFL-TGFEH  252 (377)
T ss_dssp             EEEEEECCSEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC-TTCCEEE-CCGGG
T ss_pred             EEEEEeccCCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc-CCCCEEE-Eechh
Confidence            789999999999999987555555       78888999999999999999999999999999999 6688999 89999


Q ss_pred             ccccCCCCCCCCCCcccccccCcccccCC----------CCCCchhHHHHhhhhhhC
Q 043346           89 AKEIDAPFDAHTTEMVILRYRAPKILFGR----------TNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~ape~~~~~----------~~~~~~~D~wslg~il~~  135 (135)
                      +.....   ......| +.|+|||++.+.          ..++.++|+||||+++|.
T Consensus       253 a~~~~~---~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~e  305 (377)
T 3byv_A          253 LVRDGA---RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYW  305 (377)
T ss_dssp             CEETTC---EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHH
T ss_pred             heecCC---cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHH
Confidence            986433   2334566 899999999876          137889999999999973

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.97  E-value=7e-30  Score=179.47  Aligned_cols=129  Identities=24%  Similarity=0.357  Sum_probs=109.6

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeec--CC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI--EN   77 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~--~~   77 (135)
                      .|++++++++.+. ..++|||++. ++|.+.+.+.+.+++..+..++.|++.|+.|||++|++||||||+||+++.  ..
T Consensus        81 pniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~  160 (486)
T 3mwu_A           81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKD  160 (486)
T ss_dssp             TTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTT
T ss_pred             CCcCeEEEEEEcCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCC
Confidence            4788888888655 7889999995 699999988889999999999999999999999999999999999999963  34


Q ss_pred             CeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           78 KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +.+++ +|||++...... .......+|+.|+|||++.+.  ++.++|+||+||++|
T Consensus       161 ~~~kl-~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~--~~~~~DiwslG~il~  213 (486)
T 3mwu_A          161 CDIKI-IDFGLSTCFQQN-TKMKDRIGTAYYIAPEVLRGT--YDEKCDVWSAGVILY  213 (486)
T ss_dssp             CCEEE-CSCSCTTTBCCC-----CCTTGGGGCCGGGGGSC--CCHHHHHHHHHHHHH
T ss_pred             CCEEE-EECCcCeECCCC-CccCCCcCCCCCCCHHHhCCC--CCchhhHHHHHHHHH
Confidence            57899 899999866544 334456799999999999764  788999999999987

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.97  E-value=1.8e-30  Score=178.84  Aligned_cols=132  Identities=32%  Similarity=0.584  Sum_probs=103.4

Q ss_pred             ccchhhhccce---ecceeEEEeccCCCHHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCc
Q 043346            2 QEMMKSMSLWV---HKRENLVFEYVNINLHKFIQQY---------HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTM   69 (135)
Q Consensus         2 ~~~~~~~~~~~---~~~~~lv~e~~~~~L~~~~~~~---------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~   69 (135)
                      .|++++++++.   +...++||||++++|.+++...         ..+++..+..++.|++.||.|||+++++||||||+
T Consensus        78 pniv~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~  157 (405)
T 3rgf_A           78 PNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPA  157 (405)
T ss_dssp             TTBCCCCEEEEETTTTEEEEEEECCSEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGG
T ss_pred             CCeeeEeeEEecCCCCeEEEEEeCCCCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHH
Confidence            47888888873   3378999999999999888631         14899999999999999999999999999999999


Q ss_pred             ceeee---cCCCeeEEecccccccccCCCC---CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           70 NLLAD---IENKTVKIAADSGMAKEIDAPF---DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        70 nil~~---~~~~~~~i~~d~~~~~~~~~~~---~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ||++.   ...+.+++ +|||++.......   .......+|+.|+|||++.+...++.++|+||+||++|
T Consensus       158 NIll~~~~~~~~~~kl-~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~  227 (405)
T 3rgf_A          158 NILVMGEGPERGRVKI-ADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFA  227 (405)
T ss_dssp             GEEECCSSTTTTCEEE-CCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHH
T ss_pred             HeEEecCCCCCCcEEE-EECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHH
Confidence            99993   25678999 8999998765432   23345678999999999988665889999999999987

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.97  E-value=1.2e-30  Score=173.14  Aligned_cols=130  Identities=27%  Similarity=0.403  Sum_probs=108.8

Q ss_pred             ccchhhhcccee---cceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC
Q 043346            2 QEMMKSMSLWVH---KRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN   77 (135)
Q Consensus         2 ~~~~~~~~~~~~---~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~   77 (135)
                      .|++++++++.+   ...++|||+++ ++|.++.. .+.+++..+..++.|++.|+.|||+++++|+||||+||+++ ..
T Consensus        96 ~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~-~~  173 (298)
T 2zv2_A           96 PNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT-LKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVG-ED  173 (298)
T ss_dssp             TTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC-SSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC-TT
T ss_pred             CCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEC-CC
Confidence            478888888753   36899999995 57776543 36799999999999999999999999999999999999999 67


Q ss_pred             CeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCC--CCchhHHHHhhhhhh
Q 043346           78 KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTN--CFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~--~~~~~D~wslg~il~  134 (135)
                      +.+++ +|||++..............+|+.|+|||++.+...  .+.++|+||||+++|
T Consensus       174 ~~~kl-~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~  231 (298)
T 2zv2_A          174 GHIKI-ADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLY  231 (298)
T ss_dssp             SCEEE-CCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHH
T ss_pred             CCEEE-ecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHH
Confidence            88999 899999877654444456689999999999976542  367899999999987

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.97  E-value=1.6e-30  Score=187.64  Aligned_cols=130  Identities=22%  Similarity=0.324  Sum_probs=109.4

Q ss_pred             ccchhhhccceecceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            2 QEMMKSMSLWVHKRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         2 ~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      .||+++++++.++..++|||++. ++|.+++..++.+++..+..++.|++.||.|||+++++||||||+||+++ ..+.+
T Consensus       430 pnIv~l~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~-~~~~~  508 (635)
T 4fl3_A          430 PYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLV-TQHYA  508 (635)
T ss_dssp             TTBCCEEEEEESSSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE-ETTEE
T ss_pred             CCEeeEEEEEecCCEEEEEEccCCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEe-CCCCE
Confidence            47889999988778999999995 59999999888899999999999999999999999999999999999999 67889


Q ss_pred             EEecccccccccCCCCC---CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           81 KIAADSGMAKEIDAPFD---AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~~---~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ++ +|||+++.......   ......+++.|+|||++.+.. ++.++|+||||+++|
T Consensus       509 kL-~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~-~~~~sDvwSlGv~l~  563 (635)
T 4fl3_A          509 KI-SDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK-FSSKSDVWSFGVLMW  563 (635)
T ss_dssp             EE-CCTTHHHHTTC-------------CGGGSCHHHHHHCC-CCHHHHHHHHHHHHH
T ss_pred             EE-EEcCCccccccCccccccccCCCCceeeeChhhhcCCC-CCcHHHHHHHHHHHH
Confidence            99 89999987644321   223345678899999997766 788999999999987

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.97  E-value=9e-30  Score=167.27  Aligned_cols=130  Identities=20%  Similarity=0.309  Sum_probs=111.0

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeee--cCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD--IEN   77 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~--~~~   77 (135)
                      .|++++++.+.++ ..++|||+++ ++|.+++..++.+++..+..++.|++.|+++||+++++|+||+|+||++.  ...
T Consensus        66 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~  145 (277)
T 3f3z_A           66 PNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPD  145 (277)
T ss_dssp             TTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTT
T ss_pred             CCEeeEEEEEecCCeEEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCC
Confidence            4778888888655 7899999995 59999998888899999999999999999999999999999999999992  256


Q ss_pred             CeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           78 KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +.+++ +|||++...... .......+|+.|+|||++.+.  .+.++|+||+|+++|+
T Consensus       146 ~~~~l-~Dfg~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~--~~~~~Di~slG~~l~~  199 (277)
T 3f3z_A          146 SPLKL-IDFGLAARFKPG-KMMRTKVGTPYYVSPQVLEGL--YGPECDEWSAGVMMYV  199 (277)
T ss_dssp             CCEEE-CCCTTCEECCTT-SCBCCCCSCTTTCCHHHHTTC--BCTTHHHHHHHHHHHH
T ss_pred             CcEEE-EecccceeccCc-cchhccCCCCCccChHHhccc--CCchhhehhHHHHHHH
Confidence            78899 899999876544 334456789999999998765  6789999999999873

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.97  E-value=5.6e-30  Score=180.31  Aligned_cols=129  Identities=25%  Similarity=0.373  Sum_probs=110.9

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecC--C
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE--N   77 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~--~   77 (135)
                      .||+++++++.++ ..|+|||++. ++|.+++.+...+++..+..++.|++.|+.|||++|++||||||+||+++..  .
T Consensus        96 pniv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~  175 (494)
T 3lij_A           96 PNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKD  175 (494)
T ss_dssp             TTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTT
T ss_pred             CCCCeEEEEEEeCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCC
Confidence            4788998888655 7899999995 6999999888899999999999999999999999999999999999999743  3


Q ss_pred             CeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           78 KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +.+++ +|||++...... .......+|+.|+|||++.+.  ++.++|+||+||++|
T Consensus       176 ~~~kl-~DfG~a~~~~~~-~~~~~~~gt~~y~aPE~l~~~--~~~~~DiwslG~il~  228 (494)
T 3lij_A          176 ALIKI-VDFGLSAVFENQ-KKMKERLGTAYYIAPEVLRKK--YDEKCDVWSIGVILF  228 (494)
T ss_dssp             CCEEE-CCCTTCEECBTT-BCBCCCCSCTTTCCHHHHTTC--BCTHHHHHHHHHHHH
T ss_pred             CcEEE-EECCCCeECCCC-ccccccCCCcCeeCHHHHccc--CCCchhHHHHHHHHH
Confidence            45899 899999876544 334456799999999998643  688999999999987

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.97  E-value=1e-29  Score=174.21  Aligned_cols=131  Identities=15%  Similarity=0.181  Sum_probs=109.7

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQY--HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN   77 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~   77 (135)
                      .||+++++++.++ ..++|||++. ++|.+++...  ..+++..+..++.|++.|++|||+++++||||||+||+++ ..
T Consensus        86 ~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~-~~  164 (389)
T 3gni_B           86 PNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILIS-VD  164 (389)
T ss_dssp             TTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC-TT
T ss_pred             CCCCcEeEEEEECCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc-CC
Confidence            4788888888655 7899999995 6999999874  6799999999999999999999999999999999999999 67


Q ss_pred             CeeEEecccccccccCCCC-------CCCCCCcccccccCcccccCC-CCCCchhHHHHhhhhhh
Q 043346           78 KTVKIAADSGMAKEIDAPF-------DAHTTEMVILRYRAPKILFGR-TNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~-------~~~~~~~~~~~~~ape~~~~~-~~~~~~~D~wslg~il~  134 (135)
                      +.+++ +|||.+.......       .......+|+.|+|||++.+. ..++.++|+||+||++|
T Consensus       165 ~~~kl-~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~  228 (389)
T 3gni_B          165 GKVYL-SGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITAC  228 (389)
T ss_dssp             CCEEE-CCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHH
T ss_pred             CCEEE-cccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHH
Confidence            88999 8999876542211       122334788999999999774 34788999999999987

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.97  E-value=4.2e-30  Score=175.58  Aligned_cols=130  Identities=24%  Similarity=0.291  Sum_probs=110.3

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeee-cCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD-IEN   77 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~-~~~   77 (135)
                      .|++++++++... ..++||||++ ++|.+++.. ...+++..+..++.|++.|+.|||+++++||||||+||++. ...
T Consensus       146 pnIv~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~  225 (373)
T 2x4f_A          146 ANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDA  225 (373)
T ss_dssp             TTBCCEEEEEECSSEEEEEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTT
T ss_pred             CCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCC
Confidence            4788888888655 7899999995 699998875 34689999999999999999999999999999999999985 255


Q ss_pred             CeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           78 KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +.+++ +|||++...... .......+|+.|+|||++.+.. ++.++|+||||+++|
T Consensus       226 ~~~kl-~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~  279 (373)
T 2x4f_A          226 KQIKI-IDFGLARRYKPR-EKLKVNFGTPEFLAPEVVNYDF-VSFPTDMWSVGVIAY  279 (373)
T ss_dssp             TEEEE-CCCSSCEECCTT-CBCCCCCSSCTTCCHHHHTTCB-CCHHHHHHHHHHHHH
T ss_pred             CcEEE-EeCCCceecCCc-cccccccCCCcEeChhhccCCC-CCcHHhHHHHHHHHH
Confidence            78999 899999876544 2334557899999999997765 788999999999987

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.97  E-value=1.8e-30  Score=175.98  Aligned_cols=130  Identities=23%  Similarity=0.400  Sum_probs=108.6

Q ss_pred             ccchhhhccceec--ceeEEEeccC-CCHHHHHHhcCC------------------------------------------
Q 043346            2 QEMMKSMSLWVHK--RENLVFEYVN-INLHKFIQQYHP------------------------------------------   36 (135)
Q Consensus         2 ~~~~~~~~~~~~~--~~~lv~e~~~-~~L~~~~~~~~~------------------------------------------   36 (135)
                      .|++++++++.+.  ..++||||+. ++|.+++.....                                          
T Consensus        86 pniv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (359)
T 3vhe_A           86 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASS  165 (359)
T ss_dssp             TTBCCEEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------
T ss_pred             cceeeeeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccc
Confidence            4788898887553  4889999995 599999986432                                          


Q ss_pred             ------------------------CCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEeccccccccc
Q 043346           37 ------------------------MDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEI   92 (135)
Q Consensus        37 ------------------------~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~~   92 (135)
                                              +++..+..++.|++.|+.|||+++++|+||||+||+++ ..+.+++ +|||++...
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~-~~~~~kl-~Dfg~a~~~  243 (359)
T 3vhe_A          166 GFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKI-CDFGLARDI  243 (359)
T ss_dssp             ------------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC-GGGCEEE-CCCGGGSCT
T ss_pred             ccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEc-CCCcEEE-Eeccceeee
Confidence                                    88999999999999999999999999999999999999 6688999 899999866


Q ss_pred             CCCC--CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           93 DAPF--DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        93 ~~~~--~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ....  .......+|+.|+|||++.+.. ++.++|+||||+++|
T Consensus       244 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~-~~~~~Di~slG~il~  286 (359)
T 3vhe_A          244 YKDPDYVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLW  286 (359)
T ss_dssp             TSCTTCEEC--CEECGGGCCHHHHHHCC-CCHHHHHHHHHHHHH
T ss_pred             cccccchhccccCCCceeEChhhhcCCC-CCchhhhhhHHHHHH
Confidence            4332  2334557788999999997765 788999999999987

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.97  E-value=1.2e-29  Score=170.33  Aligned_cols=127  Identities=26%  Similarity=0.455  Sum_probs=108.0

Q ss_pred             cchhhhccceec-ceeEEEeccCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecC---
Q 043346            3 EMMKSMSLWVHK-RENLVFEYVNINLHKFIQQYH--PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE---   76 (135)
Q Consensus         3 ~~~~~~~~~~~~-~~~lv~e~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~---   76 (135)
                      +++++++++.++ ..++|||+++++|.+++...+  ++++..+..++.|++.|+.|||+++++|+||||+||+++..   
T Consensus        78 ~i~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~  157 (339)
T 1z57_A           78 RCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYT  157 (339)
T ss_dssp             CBCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEE
T ss_pred             eeEeeecccccCCcEEEEEcCCCCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccc
Confidence            467777777544 889999999889999998754  68899999999999999999999999999999999999842   


Q ss_pred             ---------------CCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           77 ---------------NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        77 ---------------~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                                     .+.+++ +|||++......   .....+|+.|+|||++.+.. ++.++|+||||+++|
T Consensus       158 ~~~~~~~~~~~~~~~~~~~kl-~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~il~  225 (339)
T 1z57_A          158 EAYNPKIKRDERTLINPDIKV-VDFGSATYDDEH---HSTLVSTRHYRAPEVILALG-WSQPCDVWSIGCILI  225 (339)
T ss_dssp             EEEC----CEEEEESCCCEEE-CCCSSCEETTSC---CCSSCSCGGGCCHHHHTTSC-CCTHHHHHHHHHHHH
T ss_pred             cccCCccccccccccCCCceE-eeCcccccCccc---cccccCCccccChHHhhCCC-CCcchhhHHHHHHHH
Confidence                           456899 899998764332   34557899999999998766 788999999999987

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.97  E-value=4.3e-30  Score=168.85  Aligned_cols=131  Identities=25%  Similarity=0.443  Sum_probs=91.7

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      .|++++++++.+. ..+++||+++ ++|.+++... ..+++..+..++.|++.|+.+||+++++|+||+|+||+++ .++
T Consensus        71 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~-~~~  149 (278)
T 3cok_A           71 PSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLT-RNM  149 (278)
T ss_dssp             TTBCCEEEEEECSSEEEEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEEC-TTC
T ss_pred             CCeEeEEEEEccCCeEEEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc-CCC
Confidence            4778888888655 7889999995 5999999874 6789999999999999999999999999999999999999 678


Q ss_pred             eeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           79 TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      .+++ +|||++.....+........+++.|+|||.+.+.. .+.++|+||+|+++|+
T Consensus       150 ~~kl-~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~  204 (278)
T 3cok_A          150 NIKI-ADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSA-HGLESDVWSLGCMFYT  204 (278)
T ss_dssp             CEEE-CCCTTCEECC-----------------------------CTHHHHHHHHHHH
T ss_pred             CEEE-EeecceeeccCCCCcceeccCCCCcCCcchhcCCC-CCchhhHHHHHHHHHH
Confidence            8999 89999987655444445567899999999997765 6788999999999873

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.97  E-value=2.7e-30  Score=173.60  Aligned_cols=130  Identities=22%  Similarity=0.361  Sum_probs=107.3

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      .|++++++++.++ ..++|||+++ ++|.+++... +.+++..+..++.|++.|+.|||+++++|+||||+||+++ ..+
T Consensus       110 ~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~-~~~  188 (325)
T 3kul_A          110 PNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVD-SNL  188 (325)
T ss_dssp             TTBCCEEEEECGGGCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-TTC
T ss_pred             CCCCcEEEEEEeCCccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEC-CCC
Confidence            4788888888655 7899999995 6999999764 5799999999999999999999999999999999999998 678


Q ss_pred             eeEEecccccccccCCCCC---CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           79 TVKIAADSGMAKEIDAPFD---AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~---~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .+++ +|||++........   ......+|+.|+|||++.+.. ++.++|+||||+++|
T Consensus       189 ~~kl-~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~-~~~~~Di~slG~il~  245 (325)
T 3kul_A          189 VCKV-SDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRT-FSSASDVWSFGVVMW  245 (325)
T ss_dssp             CEEE-CCCSSCEECC----CCEECC---CCGGGSCHHHHHHCE-ECHHHHHHHHHHHHH
T ss_pred             CEEE-CCCCcccccccCccceeeccCCCCcccccCHhHhcCCC-CCcHHHHHHHHHHHH
Confidence            8999 89999987654322   122334577899999997766 788999999999987

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.96  E-value=1e-29  Score=179.39  Aligned_cols=129  Identities=26%  Similarity=0.383  Sum_probs=111.1

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC-
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK-   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~-   78 (135)
                      +||+++++++.++ ..++|||+++ ++|.+++...+.+++..+..++.|++.|+.|||+++++||||||+||+++..+. 
T Consensus       106 pniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~  185 (504)
T 3q5i_A          106 PNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSL  185 (504)
T ss_dssp             TTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCC
T ss_pred             CCCCeEEEEEEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCC
Confidence            4788888888655 7889999995 699999988889999999999999999999999999999999999999984432 


Q ss_pred             -eeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           79 -TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        79 -~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                       .+++ +|||++...... .......+|+.|+|||++.+.  ++.++|+||+|+++|
T Consensus       186 ~~~kl-~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~--~~~~~DiwslG~il~  238 (504)
T 3q5i_A          186 LNIKI-VDFGLSSFFSKD-YKLRDRLGTAYYIAPEVLKKK--YNEKCDVWSCGVIMY  238 (504)
T ss_dssp             SSEEE-CCCTTCEECCTT-SCBCCCCSCTTTCCHHHHTTC--BCTHHHHHHHHHHHH
T ss_pred             ccEEE-EECCCCEEcCCC-CccccccCCcCCCCHHHhccC--CCchHHHHHHHHHHH
Confidence             6899 899999876544 334556799999999998753  688999999999987

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.96  E-value=9e-30  Score=170.40  Aligned_cols=131  Identities=16%  Similarity=0.296  Sum_probs=107.4

Q ss_pred             ccchhhhccceec---ceeEEEeccC-CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceee-
Q 043346            2 QEMMKSMSLWVHK---RENLVFEYVN-INLHKFIQQYH---PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLA-   73 (135)
Q Consensus         2 ~~~~~~~~~~~~~---~~~lv~e~~~-~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~-   73 (135)
                      .|++++++++...   ..++|||+++ ++|.+++....   .+++..+..++.|++.|+.|||+++++|+||||+||++ 
T Consensus        67 ~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~  146 (319)
T 4euu_A           67 KNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRV  146 (319)
T ss_dssp             TTBCCEEEEEECTTTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE
T ss_pred             CCcceEEEEeecCCCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEe
Confidence            4678887776433   6789999995 69999998643   38999999999999999999999999999999999998 


Q ss_pred             ---ecCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccC-------CCCCCchhHHHHhhhhhhC
Q 043346           74 ---DIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFG-------RTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        74 ---~~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-------~~~~~~~~D~wslg~il~~  135 (135)
                         + ..+.+++ +|||++...... .......+|+.|+|||++.+       ...++.++|+||||+++|.
T Consensus       147 ~~~~-~~~~~kL-~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~e  215 (319)
T 4euu_A          147 IGED-GQSVYKL-TDFGAARELEDD-EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYH  215 (319)
T ss_dssp             ECTT-SCEEEEE-CCCTTCEECCTT-CCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHH
T ss_pred             ccCC-CCceEEE-ccCCCceecCCC-CceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHH
Confidence               4 5567889 899999876544 23345678999999999852       2337789999999999873

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.96  E-value=3.2e-30  Score=172.96  Aligned_cols=131  Identities=24%  Similarity=0.347  Sum_probs=109.1

Q ss_pred             ccchhhhccceec-----ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhC----------CcccCC
Q 043346            2 QEMMKSMSLWVHK-----RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHAR----------KIIHRD   65 (135)
Q Consensus         2 ~~~~~~~~~~~~~-----~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~----------~i~h~d   65 (135)
                      .|++++++++.+.     ..++|||++. ++|.+++.. ..+++..+..++.|++.|++|||+.          +++|+|
T Consensus        78 pniv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~D  156 (322)
T 3soc_A           78 ENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKA-NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRD  156 (322)
T ss_dssp             TTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSC
T ss_pred             CCchhhcceeccCCCCCceEEEEEecCCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCC
Confidence            4788888887553     3689999995 699999987 5699999999999999999999999          999999


Q ss_pred             CCCcceeeecCCCeeEEecccccccccCCCCC--CCCCCcccccccCcccccCCC----CCCchhHHHHhhhhhhC
Q 043346           66 LTTMNLLADIENKTVKIAADSGMAKEIDAPFD--AHTTEMVILRYRAPKILFGRT----NCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        66 l~~~nil~~~~~~~~~i~~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~----~~~~~~D~wslg~il~~  135 (135)
                      |||+||+++ ..+.+++ +|||++........  ......+|+.|+|||++.+..    .++.++|+||||+++|.
T Consensus       157 lkp~Nill~-~~~~~kL-~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~e  230 (322)
T 3soc_A          157 IKSKNVLLK-NNLTACI-ADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWE  230 (322)
T ss_dssp             CSGGGEEEC-TTCCEEE-CCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             CChHhEEEC-CCCeEEE-ccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHH
Confidence            999999999 6788999 89999987654322  234467899999999997642    24567899999999973

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.96  E-value=1e-29  Score=172.28  Aligned_cols=126  Identities=17%  Similarity=0.202  Sum_probs=105.8

Q ss_pred             hhccce--ecceeEEEeccCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC--ee
Q 043346            7 SMSLWV--HKRENLVFEYVNINLHKFIQQY--HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK--TV   80 (135)
Q Consensus         7 ~~~~~~--~~~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~--~~   80 (135)
                      ++++..  +...++|||+++++|.+++...  ..+++..+..++.|++.|+.|||+++++||||||+||+++ ..+  .+
T Consensus       122 ~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~-~~~~~~~  200 (352)
T 2jii_A          122 CMGFGVHQDKYRFLVLPSLGRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVD-PEDQSQV  200 (352)
T ss_dssp             CCEEEEETTTEEEEEEECCCEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEE-TTEEEEE
T ss_pred             hhhccccCCcEEEEEecCCCcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEc-CCCCceE
Confidence            444553  3478999999977999999875  7899999999999999999999999999999999999999 555  78


Q ss_pred             EEecccccccccCCCC-------CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           81 KIAADSGMAKEIDAPF-------DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~-------~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ++ +|||++.......       .......+|+.|+|||++.+.. ++.++|+||||+++|+
T Consensus       201 kl-~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~il~e  260 (352)
T 2jii_A          201 TL-AGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCG-PSRRSDLQSLGYCMLK  260 (352)
T ss_dssp             EE-CCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCC-CCHHHHHHHHHHHHHH
T ss_pred             EE-ecCcceeeccCCCccccccccccccccCCccccCHHHHccCC-CCchhhHHHHHHHHHH
Confidence            99 8999997664321       1224457899999999998766 7889999999999973

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.96  E-value=1.2e-29  Score=166.50  Aligned_cols=131  Identities=26%  Similarity=0.427  Sum_probs=104.3

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++++++.+. ..+++||+++ ++|.+++.+.+.+++..+..++.|++.|+.+||+++++|+||+|+||+++ ..+.
T Consensus        71 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~-~~~~  149 (276)
T 2h6d_A           71 PHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLD-AHMN  149 (276)
T ss_dssp             TTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEEC-TTSC
T ss_pred             CCEeEEEEEEecCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEEC-CCCC
Confidence            4678888877554 7899999995 69999999888899999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||++...... .......+++.|+|||.+.+....+.++|+||||+++|+
T Consensus       150 ~~l-~dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~  203 (276)
T 2h6d_A          150 AKI-ADFGLSNMMSDG-EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYA  203 (276)
T ss_dssp             EEE-CCCCGGGCCCC--------------CCTGGGTTSCCCHHHHHHHHHHHHHHH
T ss_pred             EEE-eecccccccCCC-cceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHH
Confidence            999 899999876543 223445788999999999877645688999999999873

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.96  E-value=5.2e-30  Score=169.21  Aligned_cols=130  Identities=18%  Similarity=0.300  Sum_probs=99.5

Q ss_pred             ccchhhhccceec-ceeEEEeccCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhhC-CcccCCCCCcceeeec
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNINLHKFIQQ----YHPMDSHLIKKFLYCILSGISYCHAR-KIIHRDLTTMNLLADI   75 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lh~~-~i~h~dl~~~nil~~~   75 (135)
                      .|++++++++.++ ..++|||+++++|.+++..    ...+++..+..++.|++.|+.|||++ +++|+||||+||+++ 
T Consensus        66 ~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~-  144 (290)
T 3fme_A           66 PFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLIN-  144 (290)
T ss_dssp             TTBCCEEEEEECSSSEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEEC-
T ss_pred             CeEEEEeeeeeccCCEEEEEehhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEEC-
Confidence            4678888887554 8899999999898887754    46899999999999999999999998 999999999999999 


Q ss_pred             CCCeeEEecccccccccCCCCCCCCCCcccccccCcccc---cCCCCCCchhHHHHhhhhhh
Q 043346           76 ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKIL---FGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        76 ~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~---~~~~~~~~~~D~wslg~il~  134 (135)
                      ..+.+++ +|||++...... .......+|+.|+|||++   .....++.++|+||+|+++|
T Consensus       145 ~~~~~kl-~Dfg~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~  204 (290)
T 3fme_A          145 ALGQVKM-CDFGISGYLVDD-VAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMI  204 (290)
T ss_dssp             TTCCEEB-CCC----------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHH
T ss_pred             CCCCEEE-eecCCccccccc-ccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHH
Confidence            6688999 899999866544 233344789999999997   23344788999999999987

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.96  E-value=1.5e-29  Score=166.69  Aligned_cols=131  Identities=26%  Similarity=0.357  Sum_probs=111.0

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecC--C
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE--N   77 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~--~   77 (135)
                      .|++++++++.++ ..+++||++. ++|.+.+...+.+++..+..++.|++.|+.+||+++++|+||+|+||+++.+  .
T Consensus        65 ~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~  144 (284)
T 3kk8_A           65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKG  144 (284)
T ss_dssp             TTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTT
T ss_pred             CCcCeEEEEEEcCCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCC
Confidence            4778888887555 7789999995 5999999888889999999999999999999999999999999999999733  2


Q ss_pred             CeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           78 KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +.+++ +|||.+...... .......+++.|+|||++.+.. ++.++|+||+|+++|+
T Consensus       145 ~~~kl-~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~~  199 (284)
T 3kk8_A          145 AAVKL-ADFGLAIEVNDS-EAWHGFAGTPGYLSPEVLKKDP-YSKPVDIWACGVILYI  199 (284)
T ss_dssp             CCEEE-CCCTTCEECCSS-CBCCCSCSCGGGCCHHHHTTCC-BCTHHHHHHHHHHHHH
T ss_pred             CcEEE-eeceeeEEcccC-ccccCCCCCcCCcCchhhcCCC-CCcccchHHHHHHHHH
Confidence            34888 899999766544 3334567899999999998776 6889999999999873

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.96  E-value=1.3e-29  Score=172.59  Aligned_cols=131  Identities=21%  Similarity=0.374  Sum_probs=111.5

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++++++... ..++|||+++ ++|.+++.....+++..+..++.|++.|+.|||+.|++|+||+|+||+++ .++.
T Consensus       160 p~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~-~~~~  238 (365)
T 2y7j_A          160 PHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLD-DNMQ  238 (365)
T ss_dssp             TTBCCEEEEEEBSSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-TTCC
T ss_pred             CCEeEEEEEEeeCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC-CCCC
Confidence            4677888877544 7899999996 59999999888899999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCC-----CCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGR-----TNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-----~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||++...... .......+|+.|+|||++.+.     ..++.++|+||||+++|.
T Consensus       239 ikl-~DfG~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~e  297 (365)
T 2y7j_A          239 IRL-SDFGFSCHLEPG-EKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFT  297 (365)
T ss_dssp             EEE-CCCTTCEECCTT-CCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHH
T ss_pred             EEE-EecCcccccCCC-cccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHH
Confidence            999 799998876544 334456789999999998532     236778999999999973

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.96  E-value=3.9e-30  Score=180.62  Aligned_cols=130  Identities=27%  Similarity=0.389  Sum_probs=111.7

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeec--CC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI--EN   77 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~--~~   77 (135)
                      +|++++++++.+. ..++|||++. ++|.+++...+.+++..+..++.|++.|+.|||+++++||||||+||+++.  ..
T Consensus        86 pniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~  165 (484)
T 3nyv_A           86 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKD  165 (484)
T ss_dssp             TTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTT
T ss_pred             CCCCcEEEEEEeCCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCC
Confidence            4788888888655 7899999994 699999998889999999999999999999999999999999999999952  45


Q ss_pred             CeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           78 KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +.+++ +|||++...... .......+|+.|+|||++.+.  ++.++|+||+|+++|.
T Consensus       166 ~~~kl-~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~--~~~~~DiwslG~il~~  219 (484)
T 3nyv_A          166 ANIRI-IDFGLSTHFEAS-KKMKDKIGTAYYIAPEVLHGT--YDEKCDVWSTGVILYI  219 (484)
T ss_dssp             CCEEE-CCTTHHHHBCCC-CSHHHHTTGGGTCCHHHHHTC--CCTHHHHHHHHHHHHH
T ss_pred             CcEEE-EeeeeeEEcccc-cccccCCCCccccCceeecCC--CCCcceeHHHHHHHHH
Confidence            78899 899999876544 233445789999999999763  6889999999999873

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.96  E-value=2.5e-30  Score=170.76  Aligned_cols=128  Identities=16%  Similarity=0.231  Sum_probs=107.1

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYH-PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      .|++++++++.++ ..++|||+++ ++|.+++.+.+ .+++..+..++.|++.|+.|||+++++|+||||+||+++.+ +
T Consensus        72 ~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~-~  150 (289)
T 4fvq_A           72 KHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIRE-E  150 (289)
T ss_dssp             TTBCCEEEEECCTTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEEC-C
T ss_pred             CCEeEEEEEEEeCCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecC-C
Confidence            4788888888554 7899999996 69999998754 49999999999999999999999999999999999999843 4


Q ss_pred             e--------eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           79 T--------VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        79 ~--------~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      .        +++ +|||.+......    ....+++.|+|||++.+...++.++|+||+|+++|.
T Consensus       151 ~~~~~~~~~~kl-~Dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~e  210 (289)
T 4fvq_A          151 DRKTGNPPFIKL-SDPGISITVLPK----DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWE  210 (289)
T ss_dssp             BGGGTBCCEEEE-CCCCSCTTTSCH----HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHH
T ss_pred             cccccccceeee-ccCcccccccCc----cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHH
Confidence            3        888 899998654322    234567889999999874447889999999999873

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.96  E-value=5.9e-30  Score=174.79  Aligned_cols=130  Identities=22%  Similarity=0.372  Sum_probs=99.7

Q ss_pred             ccchhhhccceec-ceeEEEecc-CCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYV-NINLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      +|++++++++.+. ..++|||++ +++|.+++.+. ..+++..+..++.|++.|++|||+++++||||||+||+++ .++
T Consensus       106 ~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~-~~~  184 (373)
T 2qol_A          106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILIN-SNL  184 (373)
T ss_dssp             TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC-TTC
T ss_pred             CCCCeEEEEEeeCCceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEc-CCC
Confidence            4788888888655 789999999 56999999874 4789999999999999999999999999999999999999 678


Q ss_pred             eeEEecccccccccCCCCCC---CCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           79 TVKIAADSGMAKEIDAPFDA---HTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~---~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .+++ +|||++.........   .....+++.|+|||++.+.. ++.++|+||||+++|
T Consensus       185 ~~kl-~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~SlG~il~  241 (373)
T 2qol_A          185 VCKV-SDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK-FTSASDVWSYGIVLW  241 (373)
T ss_dssp             CEEE-CCC----------------------CTTSCHHHHHHCC-CCHHHHHHHHHHHHH
T ss_pred             CEEE-CcCccccccccCCccceeccCCCcCCCccChhhhccCC-cCchhcHHHHHHHHH
Confidence            8999 899999876543221   12223467899999997766 788999999999987

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.96  E-value=1.2e-29  Score=172.70  Aligned_cols=130  Identities=29%  Similarity=0.498  Sum_probs=110.0

Q ss_pred             ccchhhhcccee------cceeEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeec
Q 043346            2 QEMMKSMSLWVH------KRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI   75 (135)
Q Consensus         2 ~~~~~~~~~~~~------~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~   75 (135)
                      .|++++++++..      ...+++||+++++|.+++.. +.+++..+..++.|++.|+.|||++|++|+||||+||+++ 
T Consensus        85 ~niv~~~~~~~~~~~~~~~~~~iv~e~~~~~L~~~l~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~-  162 (364)
T 3qyz_A           85 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN-  162 (364)
T ss_dssp             TTBCCCCEEECCSSTTTCCCEEEEEECCSEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC-
T ss_pred             CCCccceeEEecCCccccceEEEEEcccCcCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEEC-
Confidence            367777776633      25799999999999999977 5799999999999999999999999999999999999999 


Q ss_pred             CCCeeEEecccccccccCCCCC---CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           76 ENKTVKIAADSGMAKEIDAPFD---AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        76 ~~~~~~i~~d~~~~~~~~~~~~---~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ..+.+++ +|||++........   ......+|+.|+|||++.+...++.++|+||+|+++|
T Consensus       163 ~~~~~kl-~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~  223 (364)
T 3qyz_A          163 TTCDLKI-CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILA  223 (364)
T ss_dssp             TTCCEEE-CCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHH
T ss_pred             CCCCEEE-EeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHH
Confidence            6788999 89999986643321   2345688999999999876665789999999999987

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.96  E-value=8.5e-30  Score=169.81  Aligned_cols=131  Identities=22%  Similarity=0.376  Sum_probs=110.1

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCC------------------------CCHHHHHHHHHHHHHHHHH
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHP------------------------MDSHLIKKFLYCILSGISY   55 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~------------------------~~~~~~~~~~~~i~~~l~~   55 (135)
                      .|++++++++.++ ..++|||++. ++|.+++.....                        +++..+..++.|++.|+.|
T Consensus        86 p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~  165 (314)
T 2ivs_A           86 PHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQY  165 (314)
T ss_dssp             TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHH
T ss_pred             CceeeEEEEEecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHH
Confidence            4788888887554 7899999995 699999987433                        7899999999999999999


Q ss_pred             HhhCCcccCCCCCcceeeecCCCeeEEecccccccccCCCCC--CCCCCcccccccCcccccCCCCCCchhHHHHhhhhh
Q 043346           56 CHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFD--AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLL  133 (135)
Q Consensus        56 lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il  133 (135)
                      ||+++++|+||||+||+++ ..+.+++ +|||++........  ......+++.|+|||.+.+.. ++.++|+||||+++
T Consensus       166 lH~~~ivH~dikp~NIli~-~~~~~kl-~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il  242 (314)
T 2ivs_A          166 LAEMKLVHRDLAARNILVA-EGRKMKI-SDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHI-YTTQSDVWSFGVLL  242 (314)
T ss_dssp             HHHTTEECCCCSGGGEEEE-TTTEEEE-CCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCE-ECHHHHHHHHHHHH
T ss_pred             HHHCCCcccccchheEEEc-CCCCEEE-ccccccccccccccceeccCCCCcccccChhhhcCCC-cCchhhHHHHHHHH
Confidence            9999999999999999999 6788999 89999986644322  233456678899999997765 78899999999998


Q ss_pred             hC
Q 043346          134 RW  135 (135)
Q Consensus       134 ~~  135 (135)
                      |+
T Consensus       243 ~e  244 (314)
T 2ivs_A          243 WE  244 (314)
T ss_dssp             HH
T ss_pred             HH
Confidence            73

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.96  E-value=1.4e-29  Score=166.61  Aligned_cols=129  Identities=24%  Similarity=0.432  Sum_probs=108.2

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++++++.+. ..+++||+++ ++|.+++.....+++..+..++.|++.|+.+||++|++|+||+|+||+++ ..+.
T Consensus        69 ~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~-~~~~  147 (279)
T 3fdn_A           69 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG-SAGE  147 (279)
T ss_dssp             TTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEEC-TTSC
T ss_pred             CCCcchhheEecCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEc-CCCC
Confidence            4788888888655 7899999996 59999999888899999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||++......  ......+++.|+|||.+.+.. .+.++|+||+|+++|+
T Consensus       148 ~~l-~Dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~  199 (279)
T 3fdn_A          148 LKI-ADFGWSVHAPSS--RRTDLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYE  199 (279)
T ss_dssp             EEE-CSCCEESCC----------CCCCTTCCHHHHTTCC-CCTTHHHHHHHHHHHH
T ss_pred             EEE-EeccccccCCcc--cccccCCCCCccCHhHhccCC-CCccchhHhHHHHHHH
Confidence            999 899988654332  234557899999999998766 6789999999999873

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.96  E-value=8.9e-30  Score=173.72  Aligned_cols=127  Identities=28%  Similarity=0.499  Sum_probs=98.7

Q ss_pred             ccchhhhccceec-------ceeEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeee
Q 043346            2 QEMMKSMSLWVHK-------RENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD   74 (135)
Q Consensus         2 ~~~~~~~~~~~~~-------~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~   74 (135)
                      .|++++++++...       ..++|||+++++|.+.+..  .+++..+..++.|++.|+.|||++|++||||||+||+++
T Consensus        84 pniv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~--~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~  161 (371)
T 2xrw_A           84 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK  161 (371)
T ss_dssp             TTBCCEEEEECSCCSTTTCCEEEEEEECCSEEHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC
T ss_pred             CCccceEEeeccccccccccceEEEEEcCCCCHHHHHhh--ccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEc
Confidence            4677777776432       5799999999999998863  589999999999999999999999999999999999999


Q ss_pred             cCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           75 IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        75 ~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                       ..+.+++ +|||++...... .......+|+.|+|||++.+.. ++.++|+||+|+++|
T Consensus       162 -~~~~~kl-~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~  217 (371)
T 2xrw_A          162 -SDCTLKI-LDFGLARTAGTS-FMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMG  217 (371)
T ss_dssp             -TTSCEEE-CCCCC-----------------CTTCCHHHHTTCC-CCTTHHHHHHHHHHH
T ss_pred             -CCCCEEE-EEeecccccccc-cccCCceecCCccCHHHhcCCC-CCchHhHHHHHHHHH
Confidence             6788999 899999865433 2334567899999999998766 788999999999987

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.96  E-value=1.2e-29  Score=167.12  Aligned_cols=131  Identities=15%  Similarity=0.282  Sum_probs=108.8

Q ss_pred             ccchhhhccceecceeEEEeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHKRENLVFEYVN-INLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      +|++++++++.++..+++||++. ++|.+++.+. ..+++..+..++.|++.|+.+||+++++|+||+|+||+++ ..+.
T Consensus        73 ~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~-~~~~  151 (281)
T 3cc6_A           73 PHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVA-SPEC  151 (281)
T ss_dssp             TTBCCEEEEECSSSCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEE-ETTE
T ss_pred             CCcceEEEEEcCCCCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEC-CCCc
Confidence            47888888888788899999995 6999999774 4689999999999999999999999999999999999999 6688


Q ss_pred             eEEecccccccccCCCCC-CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFD-AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||++........ ......+++.|+|||++.+.. ++.++|+||||+++|+
T Consensus       152 ~kl-~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~  206 (281)
T 3cc6_A          152 VKL-GDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRR-FTTASDVWMFAVCMWE  206 (281)
T ss_dssp             EEE-CCCCGGGCC---------CCCCCGGGCCHHHHHHCC-CCHHHHHHHHHHHHHH
T ss_pred             EEe-CccCCCcccccccccccccCCCCcceeCchhhccCC-CCchhccHHHHHHHHH
Confidence            999 89999987654322 223445678899999997665 7889999999999873

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=7.5e-30  Score=172.17  Aligned_cols=131  Identities=23%  Similarity=0.386  Sum_probs=109.3

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcC-----------------------CCCHHHHHHHHHHHHHHHHHH
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYH-----------------------PMDSHLIKKFLYCILSGISYC   56 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~-----------------------~~~~~~~~~~~~~i~~~l~~l   56 (135)
                      .|++++++++..+ ..++|||+++ ++|.+++....                       .+++..+..++.|++.|+.||
T Consensus       109 p~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~L  188 (344)
T 1rjb_A          109 ENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFL  188 (344)
T ss_dssp             TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHH
T ss_pred             CCeeeEEEEEeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHH
Confidence            4788888887554 8899999995 69999998643                       278999999999999999999


Q ss_pred             hhCCcccCCCCCcceeeecCCCeeEEecccccccccCCCCC--CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           57 HARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFD--AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        57 h~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      |++|++|+||||+||+++ ..+.+++ +|||++........  ......+|+.|+|||++.+.. ++.++|+||||+++|
T Consensus       189 H~~~ivH~Dikp~NIll~-~~~~~kL-~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~-~~~~~Di~slG~il~  265 (344)
T 1rjb_A          189 EFKSCVHRDLAARNVLVT-HGKVVKI-CDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGI-YTIKSDVWSYGILLW  265 (344)
T ss_dssp             HHTTEEETTCSGGGEEEE-TTTEEEE-CCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCC-CCHHHHHHHHHHHHH
T ss_pred             HhCCcccCCCChhhEEEc-CCCcEEe-CCCccCcccccCccceeccCccCccCccCHHHhccCC-CChhHhHHHHHHHHH
Confidence            999999999999999999 7789999 89999986643322  233456678899999997766 788999999999987


Q ss_pred             C
Q 043346          135 W  135 (135)
Q Consensus       135 ~  135 (135)
                      +
T Consensus       266 e  266 (344)
T 1rjb_A          266 E  266 (344)
T ss_dssp             H
T ss_pred             H
Confidence            3

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.96  E-value=1e-29  Score=170.89  Aligned_cols=131  Identities=20%  Similarity=0.323  Sum_probs=105.1

Q ss_pred             ccchhhhccceecceeEEEecc-CCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHKRENLVFEYV-NINLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++++++..+..++++|++ +++|.+++.. .+.+++..+..++.|++.|+.|||+++++|+||||+||+++ ..+.
T Consensus        77 p~iv~~~~~~~~~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~-~~~~  155 (327)
T 3lzb_A           77 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK-TPQH  155 (327)
T ss_dssp             TTBCCCCEEEESSSEEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE-ETTE
T ss_pred             CCeeEEEEEEecCCceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEc-CCCC
Confidence            4788899988888889999999 5699999987 45799999999999999999999999999999999999998 6788


Q ss_pred             eEEecccccccccCCCCC--CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFD--AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||++........  ......+++.|+|||.+.+.. ++.++|+||||+++|+
T Consensus       156 ~kL-~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~-~~~~~Di~slG~il~e  211 (327)
T 3lzb_A          156 VKI-TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYGVTVWE  211 (327)
T ss_dssp             EEE-CCTTC----------------CCCGGGSCHHHHHHCC-CCHHHHHHHHHHHHHH
T ss_pred             EEE-ccCcceeEccCccccccccCCCccccccCHHHHcCCC-CChHHHHHHHHHHHHH
Confidence            999 89999987643322  223345677899999998766 7889999999999873

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.96  E-value=5.3e-30  Score=171.11  Aligned_cols=133  Identities=21%  Similarity=0.293  Sum_probs=104.7

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC-
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK-   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~-   78 (135)
                      .|++++++++.++ ..++|||++. ++|.+++.+.+.+++..+..++.|++.|++|||+++++|+||||+||+++.++. 
T Consensus        71 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~  150 (316)
T 2ac3_A           71 RNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQV  150 (316)
T ss_dssp             TTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSS
T ss_pred             CCeeeEEEEEeeCCEEEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCc
Confidence            4788888888555 7899999995 699999998888999999999999999999999999999999999999984332 


Q ss_pred             -eeEEecccccccccCCCC-------CCCCCCcccccccCcccccCC----CCCCchhHHHHhhhhhhC
Q 043346           79 -TVKIAADSGMAKEIDAPF-------DAHTTEMVILRYRAPKILFGR----TNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        79 -~~~i~~d~~~~~~~~~~~-------~~~~~~~~~~~~~ape~~~~~----~~~~~~~D~wslg~il~~  135 (135)
                       .+++ +|||++.......       .......+|+.|+|||++.+.    ..++.++|+||||+++|.
T Consensus       151 ~~~kl-~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~  218 (316)
T 2ac3_A          151 SPVKI-CDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYI  218 (316)
T ss_dssp             CSEEE-CCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHH
T ss_pred             CceEE-EEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHH
Confidence             3899 8999987653221       122345689999999999641    225778999999999973

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.96  E-value=1.6e-29  Score=167.95  Aligned_cols=130  Identities=24%  Similarity=0.357  Sum_probs=112.3

Q ss_pred             ccchhhhccceec-ceeEEEeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++++.+.+. ..++|||++++ +|.+++.. +.+++..+..++.|++.|+.+||++|++|+||+|+||+++ ..+.
T Consensus        80 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~-~~~~  157 (303)
T 3a7i_A           80 PYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS-EHGE  157 (303)
T ss_dssp             TTBCCEEEEEEETTEEEEEEECCTTEEHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC-TTSC
T ss_pred             CCEeEEEEEEecCCeEEEEEEeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEEC-CCCC
Confidence            4677888877554 78999999965 99999876 6799999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||.+..............+++.|+|||++.+.. ++.++|+||||+++|+
T Consensus       158 ~kl-~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~  211 (303)
T 3a7i_A          158 VKL-ADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSA-YDSKADIWSLGITAIE  211 (303)
T ss_dssp             EEE-CCCTTCEECBTTBCCBCCCCSCGGGCCHHHHTTCC-BCTHHHHHHHHHHHHH
T ss_pred             EEE-eecccceecCccccccCccCCCcCccCHHHHhcCC-CCchhhhHHHHHHHHH
Confidence            999 89999987765544455678899999999998765 6789999999999873

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.96  E-value=5.2e-30  Score=172.74  Aligned_cols=131  Identities=27%  Similarity=0.435  Sum_probs=108.5

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhc------------------------CCCCHHHHHHHHHHHHHHHHH
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQY------------------------HPMDSHLIKKFLYCILSGISY   55 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~------------------------~~~~~~~~~~~~~~i~~~l~~   55 (135)
                      .|++++++++..+ ..++|||++. ++|.+++...                        ..+++..+..++.|++.|+.|
T Consensus       110 p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~  189 (343)
T 1luf_A          110 PNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAY  189 (343)
T ss_dssp             TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHH
T ss_pred             CCEEEEEEEEccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHH
Confidence            4788888887544 7899999995 5999999863                        568999999999999999999


Q ss_pred             HhhCCcccCCCCCcceeeecCCCeeEEecccccccccCCCC--CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhh
Q 043346           56 CHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPF--DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLL  133 (135)
Q Consensus        56 lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il  133 (135)
                      ||+++++|+||||+||+++ ..+.+++ +|||++.......  .......+++.|+|||++.+.. ++.++|+||||+++
T Consensus       190 LH~~~ivH~Dlkp~NIl~~-~~~~~kl-~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~-~~~~~Di~slG~il  266 (343)
T 1luf_A          190 LSERKFVHRDLATRNCLVG-ENMVVKI-ADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNR-YTTESDVWAYGVVL  266 (343)
T ss_dssp             HHHTTCCCSCCSGGGEEEC-GGGCEEE-CCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCC-CCHHHHHHHHHHHH
T ss_pred             HHhCCeecCCCCcceEEEC-CCCeEEE-eecCCCcccccCccccccCCCcccceecChhhhccCC-cCcccccHHHHHHH
Confidence            9999999999999999999 6688999 8999997654321  2234456788999999997766 78899999999998


Q ss_pred             hC
Q 043346          134 RW  135 (135)
Q Consensus       134 ~~  135 (135)
                      |+
T Consensus       267 ~e  268 (343)
T 1luf_A          267 WE  268 (343)
T ss_dssp             HH
T ss_pred             HH
Confidence            73

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.96  E-value=2.8e-29  Score=166.00  Aligned_cols=118  Identities=21%  Similarity=0.262  Sum_probs=102.3

Q ss_pred             ceeEEEeccCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeee--cCCCeeEEecccccccc
Q 043346           15 RENLVFEYVNINLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD--IENKTVKIAADSGMAKE   91 (135)
Q Consensus        15 ~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~--~~~~~~~i~~d~~~~~~   91 (135)
                      ..+++||+++++|.+++.. ...+++..+..++.|++.|+.|||+++++|+||||+||++.  ...+.+++ +|||++..
T Consensus        79 ~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL-~Dfg~a~~  157 (296)
T 4hgt_A           79 YNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYI-IDFGLAKK  157 (296)
T ss_dssp             EEEEEEECCCCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEE-CCCTTCEE
T ss_pred             ceEEEEEccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEE-ecCcccee
Confidence            6789999998899999985 46799999999999999999999999999999999999993  26678999 89999987


Q ss_pred             cCCCCC-------CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           92 IDAPFD-------AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        92 ~~~~~~-------~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ......       ......+|+.|+|||.+.+.. ++.++|+||+|+++|
T Consensus       158 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~il~  206 (296)
T 4hgt_A          158 YRDARTHQHIPYRENKNLTGTARYASINTHLGIE-QSRRDDLESLGYVLM  206 (296)
T ss_dssp             CBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCC-CCHHHHHHHHHHHHH
T ss_pred             ccCcccCccCCCCcccccCCCccccchHHhcCCC-CCchhHHHHHHHHHH
Confidence            654322       234567899999999998776 788999999999987

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.96  E-value=4.9e-30  Score=174.82  Aligned_cols=131  Identities=20%  Similarity=0.350  Sum_probs=108.0

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCccee
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQY-------HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLL   72 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~-------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil   72 (135)
                      .|++++++++.+. ..++|||++. ++|.+++...       ..++...+..++.|++.|+.|||++|++||||||+||+
T Consensus       134 pnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIl  213 (367)
T 3l9p_A          134 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCL  213 (367)
T ss_dssp             TTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEE
T ss_pred             CCCCeEEEEEecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEE
Confidence            4788888888555 7899999995 5999999864       25889999999999999999999999999999999999


Q ss_pred             eecC--CCeeEEecccccccccCC--CCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           73 ADIE--NKTVKIAADSGMAKEIDA--PFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        73 ~~~~--~~~~~i~~d~~~~~~~~~--~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ++.+  ...+++ +|||+++....  .........+|+.|+|||++.+.. ++.++|+|||||++|
T Consensus       214 l~~~~~~~~~kL-~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~-~~~~~DvwslG~il~  277 (367)
T 3l9p_A          214 LTCPGPGRVAKI-GDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGI-FTSKTDTWSFGVLLW  277 (367)
T ss_dssp             ESCSSTTCCEEE-CCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCC-CCHHHHHHHHHHHHH
T ss_pred             EecCCCCceEEE-CCCccccccccccccccCCCcCCcccEECHHHhcCCC-CCcHHHHHHHHHHHH
Confidence            9832  235888 89999975422  122334456788999999997766 788999999999987

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.96  E-value=3e-29  Score=165.01  Aligned_cols=116  Identities=25%  Similarity=0.429  Sum_probs=101.5

Q ss_pred             ceeEEEeccC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEecccccccc
Q 043346           15 RENLVFEYVN-INLHKFIQQY--HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKE   91 (135)
Q Consensus        15 ~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~   91 (135)
                      ..+++||+++ ++|.+++.+.  ..+++..+..++.|++.|+.+||+++++|+||+|+||+++ .++.+++ +|||++..
T Consensus        94 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~-~~~~~kl-~Dfg~~~~  171 (284)
T 2a19_B           94 CLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLV-DTKQVKI-GDFGLVTS  171 (284)
T ss_dssp             EEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE-ETTEEEE-CCCTTCEE
T ss_pred             eEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEc-CCCCEEE-Ccchhhee
Confidence            5789999996 5999999753  5799999999999999999999999999999999999999 6788999 89999987


Q ss_pred             cCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           92 IDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .... .......+++.|+|||++.+.. ++.++|+||||+++|
T Consensus       172 ~~~~-~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~  212 (284)
T 2a19_B          172 LKND-GKRTRSKGTLRYMSPEQISSQD-YGKEVDLYALGLILA  212 (284)
T ss_dssp             SSCC-SCCCCCCSCCTTSCHHHHHCSC-CCTHHHHHHHHHHHH
T ss_pred             cccc-ccccccCCcccccChhhhccCC-CcchhhhHHHHHHHH
Confidence            6544 2334557899999999998766 788999999999987

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.96  E-value=3e-29  Score=167.36  Aligned_cols=131  Identities=21%  Similarity=0.323  Sum_probs=113.1

Q ss_pred             ccchhhhccceec-ceeEEEeccCC-CHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNI-NLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~-~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      .|++++++.+.+. ..+++||++++ +|.+++.. ...+++..+..++.|++.|+.+||+.|++|+||+|+||+++ ..+
T Consensus        84 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~-~~~  162 (314)
T 3com_A           84 PHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLN-TEG  162 (314)
T ss_dssp             TTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC-TTC
T ss_pred             CCCccEEEEEEeCCEEEEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEEC-CCC
Confidence            4778888877554 78999999965 99999974 56899999999999999999999999999999999999999 667


Q ss_pred             eeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           79 TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      .+++ +|||.+..............+++.|+|||.+.+.. ++.++|+||||+++|+
T Consensus       163 ~~kl-~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~  217 (314)
T 3com_A          163 HAKL-ADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG-YNCVADIWSLGITAIE  217 (314)
T ss_dssp             CEEE-CCCTTCEECBTTBSCBCCCCSCGGGCCHHHHSSSC-BCTTHHHHHHHHHHHH
T ss_pred             CEEE-eecccchhhhhhccccCccCCCCCccChhhcCCCC-CCccccHHHHHHHHHH
Confidence            8999 89999987765544555667899999999997765 6788999999999873

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.96  E-value=1.1e-29  Score=170.37  Aligned_cols=131  Identities=22%  Similarity=0.302  Sum_probs=110.8

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCCccee
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYH----PMDSHLIKKFLYCILSGISYCHAR---KIIHRDLTTMNLL   72 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil   72 (135)
                      +|++++++++... ..++|||++. ++|.+++....    .+++..+..++.|++.|+.|||++   +++|+||||+||+
T Consensus        87 ~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil  166 (326)
T 3uim_A           87 RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANIL  166 (326)
T ss_dssp             TTBCCCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEE
T ss_pred             CCccceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEE
Confidence            4788888888544 7899999995 59999998633    489999999999999999999999   9999999999999


Q ss_pred             eecCCCeeEEecccccccccCCCCC-CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           73 ADIENKTVKIAADSGMAKEIDAPFD-AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        73 ~~~~~~~~~i~~d~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ++ ..+.+++ +|||++........ ......+|+.|+|||++.+.. ++.++|+||+|+++|.
T Consensus       167 ~~-~~~~~kl-~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~il~~  227 (326)
T 3uim_A          167 LD-EEFEAVV-GDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGK-SSEKTDVFGYGVMLLE  227 (326)
T ss_dssp             EC-TTCCEEE-CCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSE-ECHHHHHHHHHHHHHH
T ss_pred             EC-CCCCEEe-ccCccccccCcccccccccccCCcCccCHHHhccCC-CCccccchhHHHHHHH
Confidence            99 6788999 89999987653322 234456899999999997766 7889999999999873

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=2.1e-29  Score=169.32  Aligned_cols=130  Identities=25%  Similarity=0.369  Sum_probs=105.6

Q ss_pred             ccchhhhcccee-----cceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhC--------CcccCCCC
Q 043346            2 QEMMKSMSLWVH-----KRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHAR--------KIIHRDLT   67 (135)
Q Consensus         2 ~~~~~~~~~~~~-----~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~--------~i~h~dl~   67 (135)
                      .|++++++.+..     ...++|||++. ++|.++++. ..+++..+..++.|++.|+.|||++        +++|||||
T Consensus        91 ~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dik  169 (337)
T 3mdy_A           91 ENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKS-TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLK  169 (337)
T ss_dssp             TTBCCEEEEEEESCGGGCEEEEEECCCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCC
T ss_pred             CCeeeEEEEEccCCCCCCceEEEEeccCCCcHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccc
Confidence            467777777644     36789999995 599999976 5799999999999999999999998        99999999


Q ss_pred             CcceeeecCCCeeEEecccccccccCCCCCC----CCCCcccccccCcccccCCCCCCc-----hhHHHHhhhhhh
Q 043346           68 TMNLLADIENKTVKIAADSGMAKEIDAPFDA----HTTEMVILRYRAPKILFGRTNCFA-----AIDMWAVLYLLR  134 (135)
Q Consensus        68 ~~nil~~~~~~~~~i~~d~~~~~~~~~~~~~----~~~~~~~~~~~ape~~~~~~~~~~-----~~D~wslg~il~  134 (135)
                      |+||+++ ..+.+++ +|||++.........    .....+|+.|+|||++.+......     ++|+||||+++|
T Consensus       170 p~Nill~-~~~~~kl-~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~  243 (337)
T 3mdy_A          170 SKNILVK-KNGTCCI-ADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILW  243 (337)
T ss_dssp             GGGEEEC-TTSCEEE-CCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHH
T ss_pred             hHHEEEC-CCCCEEE-EeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHH
Confidence            9999999 6788999 899999766443222    235678999999999977653222     389999999987

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.96  E-value=2.5e-29  Score=168.36  Aligned_cols=130  Identities=26%  Similarity=0.531  Sum_probs=110.1

Q ss_pred             ccchhhhccce------ecceeEEEeccCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceee
Q 043346            2 QEMMKSMSLWV------HKRENLVFEYVNINLHKFIQQY--HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLA   73 (135)
Q Consensus         2 ~~~~~~~~~~~------~~~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~   73 (135)
                      .|++++++++.      ....+++||+++++|.+++...  ..+++..+..++.|++.|+.|||++|++|+||+|+||++
T Consensus        74 ~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili  153 (326)
T 1blx_A           74 PNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV  153 (326)
T ss_dssp             TTBCCEEEEEEEEECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE
T ss_pred             CCeEeeeeeeeecccCCCceEEEEEecCCCCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEE
Confidence            46777777764      3478899999999999999874  358999999999999999999999999999999999999


Q ss_pred             ecCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           74 DIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        74 ~~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      + ..+.+++ +|||++...... .......+++.|+|||++.+.. ++.++|+||||+++|+
T Consensus       154 ~-~~~~~kl-~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~  211 (326)
T 1blx_A          154 T-SSGQIKL-ADFGLARIYSFQ-MALTSVVVTLWYRAPEVLLQSS-YATPVDLWSVGCIFAE  211 (326)
T ss_dssp             C-TTCCEEE-CSCCSCCCCCGG-GGGCCCCCCCTTCCHHHHTTCC-CCTHHHHHHHHHHHHH
T ss_pred             c-CCCCEEE-ecCcccccccCC-CCccccccccceeCHHHHhcCC-CCcchhHHHHHHHHHH
Confidence            9 6788999 899998765432 2334567899999999998766 7889999999999873

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.96  E-value=2.4e-29  Score=165.81  Aligned_cols=129  Identities=26%  Similarity=0.413  Sum_probs=111.3

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      +|++++++++.+. ..+++||++. ++|.+++.+.+.+++..+..++.|++.|+.+||+++++|+||+|+||+++ ..+.
T Consensus        74 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~-~~~~  152 (284)
T 2vgo_A           74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMG-YKGE  152 (284)
T ss_dssp             TTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEEC-TTCC
T ss_pred             CCEeeEEEEEEcCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEc-CCCC
Confidence            4778888888554 7899999996 59999999888899999999999999999999999999999999999999 6688


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||++......  ......+++.|+|||++.+.. .+.++|+||||+++|+
T Consensus       153 ~kl-~Dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~  204 (284)
T 2vgo_A          153 LKI-ADFGWSVHAPSL--RRRTMCGTLDYLPPEMIEGKT-HDEKVDLWCAGVLCYE  204 (284)
T ss_dssp             EEE-CCCTTCEECSSS--CBCCCCSCGGGCCHHHHTTCC-BCTTHHHHHHHHHHHH
T ss_pred             EEE-ecccccccCccc--ccccccCCCCcCCHHHhccCC-CCcccchhhHHHHHHH
Confidence            999 899998765432  234557899999999998766 6789999999999873

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.96  E-value=2.1e-29  Score=167.83  Aligned_cols=131  Identities=21%  Similarity=0.377  Sum_probs=110.2

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcC------------------CCCHHHHHHHHHHHHHHHHHHhhCCc
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYH------------------PMDSHLIKKFLYCILSGISYCHARKI   61 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~------------------~~~~~~~~~~~~~i~~~l~~lh~~~i   61 (135)
                      .|++++++++..+ ..++|||++. ++|.+++....                  .+++..+..++.|++.|+.|||++++
T Consensus        87 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i  166 (313)
T 1t46_A           87 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC  166 (313)
T ss_dssp             TTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CCeeeEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            4788888887544 7899999996 59999998643                  48999999999999999999999999


Q ss_pred             ccCCCCCcceeeecCCCeeEEecccccccccCCCCC--CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           62 IHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFD--AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        62 ~h~dl~~~nil~~~~~~~~~i~~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +|+||||+||+++ ..+.+++ +|||++........  ......+++.|+|||.+.+.. .+.++|+||||+++|+
T Consensus       167 ~H~dlkp~Nil~~-~~~~~kl-~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~e  239 (313)
T 1t46_A          167 IHRDLAARNILLT-HGRITKI-CDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCV-YTFESDVWSYGIFLWE  239 (313)
T ss_dssp             CCSCCSGGGEEEE-TTTEEEE-CCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCC-CCHHHHHHHHHHHHHH
T ss_pred             ecCCCccceEEEc-CCCCEEE-ccccccccccccccceeccCCCCcceeeChHHhcCCC-CChHHHHHHHHHHHHH
Confidence            9999999999999 6788999 89999987654422  233455678899999997765 7889999999999873

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.96  E-value=6.1e-30  Score=169.63  Aligned_cols=130  Identities=24%  Similarity=0.367  Sum_probs=106.6

Q ss_pred             ccchhhhcccee-----cceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHh--------hCCcccCCCC
Q 043346            2 QEMMKSMSLWVH-----KRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCH--------ARKIIHRDLT   67 (135)
Q Consensus         2 ~~~~~~~~~~~~-----~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh--------~~~i~h~dl~   67 (135)
                      +|++++++.+..     ...++|||+++ ++|.++++. ..+++..+..++.|++.|++|||        +.+++|||||
T Consensus        62 ~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlk  140 (301)
T 3q4u_A           62 ENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQL-TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLK  140 (301)
T ss_dssp             TTBCCEEEEEEEEETTEEEEEEEECCCTTCBHHHHHTT-CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCC
T ss_pred             cCeeeEEEeeccccCCCceeEEehhhccCCCHHHHHhh-cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCC
Confidence            467777766422     35789999995 699999965 57999999999999999999999        9999999999


Q ss_pred             CcceeeecCCCeeEEecccccccccCCCCCC----CCCCcccccccCcccccCCCC-----CCchhHHHHhhhhhh
Q 043346           68 TMNLLADIENKTVKIAADSGMAKEIDAPFDA----HTTEMVILRYRAPKILFGRTN-----CFAAIDMWAVLYLLR  134 (135)
Q Consensus        68 ~~nil~~~~~~~~~i~~d~~~~~~~~~~~~~----~~~~~~~~~~~ape~~~~~~~-----~~~~~D~wslg~il~  134 (135)
                      |+||+++ ..+.+++ +|||++.........    .....+|+.|+|||++.+...     .+.++|+||+|+++|
T Consensus       141 p~Nill~-~~~~~kl-~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~  214 (301)
T 3q4u_A          141 SKNILVK-KNGQCCI-ADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLW  214 (301)
T ss_dssp             GGGEEEC-TTSCEEE-CCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHH
T ss_pred             hHhEEEc-CCCCEEE-eeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHH
Confidence            9999999 6788999 899999765433221    334578999999999977632     336899999999987

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.96  E-value=5.9e-29  Score=168.63  Aligned_cols=131  Identities=27%  Similarity=0.496  Sum_probs=109.2

Q ss_pred             ccchhhhccceec--------ceeEEEeccCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHh--hCCcccCCCC
Q 043346            2 QEMMKSMSLWVHK--------RENLVFEYVNINLHKFIQ----QYHPMDSHLIKKFLYCILSGISYCH--ARKIIHRDLT   67 (135)
Q Consensus         2 ~~~~~~~~~~~~~--------~~~lv~e~~~~~L~~~~~----~~~~~~~~~~~~~~~~i~~~l~~lh--~~~i~h~dl~   67 (135)
                      .|++++++++...        ..++|||+++++|.+.+.    ....+++..+..++.|++.|+.+||  +++++|+|||
T Consensus        79 ~niv~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlk  158 (360)
T 3e3p_A           79 PNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIK  158 (360)
T ss_dssp             TTBCCEEEEEEEECSSCTTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCC
T ss_pred             CCcccHHHhhhccccccccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCC
Confidence            4678887777432        278999999888776654    3567899999999999999999999  9999999999


Q ss_pred             CcceeeecCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           68 TMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        68 ~~nil~~~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      |+||+++...+.+++ +|||++...... .......+|+.|+|||++.+...++.++|+||||+++|
T Consensus       159 p~NIll~~~~~~~kl-~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~  223 (360)
T 3e3p_A          159 PHNVLVNEADGTLKL-CDFGSAKKLSPS-EPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFA  223 (360)
T ss_dssp             GGGEEEETTTTEEEE-CCCTTCBCCCTT-SCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHH
T ss_pred             HHHEEEeCCCCcEEE-eeCCCceecCCC-CCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHH
Confidence            999999955789999 899999876544 33445678999999999977666789999999999987

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.96  E-value=2.7e-29  Score=165.33  Aligned_cols=131  Identities=24%  Similarity=0.380  Sum_probs=107.7

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC--
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN--   77 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~--   77 (135)
                      +|++++++++.++ ..+++||+++ ++|.+++.+...+++..+..++.|++.|+.+||+++++|+||+|+||+++.++  
T Consensus        68 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~  147 (283)
T 3bhy_A           68 PNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVP  147 (283)
T ss_dssp             TTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSS
T ss_pred             CCeeehhheecCCCeEEEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCC
Confidence            4678888887554 7899999995 69999998888899999999999999999999999999999999999998432  


Q ss_pred             -CeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           78 -KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        78 -~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                       ..+++ +|||.+...... .......+++.|+|||++.+.. .+.++|+||||+++|+
T Consensus       148 ~~~~kl-~dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~  203 (283)
T 3bhy_A          148 NPRIKL-IDFGIAHKIEAG-NEFKNIFGTPEFVAPEIVNYEP-LGLEADMWSIGVITYI  203 (283)
T ss_dssp             SCCEEE-CCCTTCEECC---------CCCGGGCCHHHHTTCC-CCTHHHHHHHHHHHHH
T ss_pred             CCceEE-EecccceeccCC-CcccccCCCcCccCcceecCCC-CCcchhhhhHHHHHHH
Confidence             27899 899999876543 2234456899999999997766 7889999999999873

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.96  E-value=9e-30  Score=168.64  Aligned_cols=130  Identities=24%  Similarity=0.390  Sum_probs=104.3

Q ss_pred             ccchhhhcccee---cceeEEEecc-CCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecC
Q 043346            2 QEMMKSMSLWVH---KRENLVFEYV-NINLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE   76 (135)
Q Consensus         2 ~~~~~~~~~~~~---~~~~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~   76 (135)
                      .|++++++++..   ...++|||++ +++|.+++... ..+++..+..++.|++.|+.|||+++++|+||||+||+++ .
T Consensus        71 ~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~-~  149 (295)
T 3ugc_A           71 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE-N  149 (295)
T ss_dssp             TTBCCEEEEECHHHHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE-E
T ss_pred             CCEeeEEEEEecCCCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEc-C
Confidence            467777776632   3589999999 56999999874 4599999999999999999999999999999999999999 6


Q ss_pred             CCeeEEecccccccccCCCC---CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           77 NKTVKIAADSGMAKEIDAPF---DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        77 ~~~~~i~~d~~~~~~~~~~~---~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .+.+++ +|||++.......   .......+++.|+|||.+.+.. ++.++|+||+|+++|
T Consensus       150 ~~~~kl-~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~  208 (295)
T 3ugc_A          150 ENRVKI-GDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESK-FSVASDVWSFGVVLY  208 (295)
T ss_dssp             TTEEEE-CCCCSCC-------------CTTCGGGGCCHHHHHHCC-CCHHHHHHHHHHHHH
T ss_pred             CCeEEE-ccCcccccccCCcceeeeccCCCCccceeCcHHhcCCC-CChHHHHHHHHHHHH
Confidence            688999 8999998764432   1233445677899999998766 788999999999987

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.96  E-value=2.5e-29  Score=167.73  Aligned_cols=131  Identities=17%  Similarity=0.184  Sum_probs=101.9

Q ss_pred             ccchhhhccceec-ceeEEEeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++++++..+ ..+++||++++ +|.+++.+.+.+++..+..++.|++.|+.+||+++++|+||+|+||+++ ..+.
T Consensus        94 p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~-~~~~  172 (309)
T 2h34_A           94 PHVVPIHDFGEIDGQLYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVS-ADDF  172 (309)
T ss_dssp             TTBCCEEEEEEETTEEEEEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC-TTSC
T ss_pred             CCeeEEEEEEeeCCeEEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEc-CCCC
Confidence            4778888887554 78999999965 9999999888899999999999999999999999999999999999999 6688


Q ss_pred             eEEecccccccccCCCC-CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPF-DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||++....... .......+++.|+|||.+.+.. .+.++|+||||+++|+
T Consensus       173 ~kl-~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~  227 (309)
T 2h34_A          173 AYL-VDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESH-ATYRADIYALTCVLYE  227 (309)
T ss_dssp             EEE-CSCCC----------------CCGGGCCGGGTCC-----CCCHHHHHHHHHHH
T ss_pred             EEE-ecCccCccccccccccccccCCCcCccCHHHHcCCC-CCchHhHHHHHHHHHH
Confidence            999 8999987664432 2234557899999999997765 6788999999999873

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.96  E-value=6.3e-30  Score=178.46  Aligned_cols=130  Identities=22%  Similarity=0.332  Sum_probs=110.1

Q ss_pred             ccchhhhccceecceeEEEeccC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHKRENLVFEYVN-INLHKFIQQY--HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      .|++++++++.++..++|||++. ++|.+++...  ..++...+..++.|++.||.|||+++++||||||+||+++ ..+
T Consensus       243 ~~iv~l~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~-~~~  321 (454)
T 1qcf_A          243 DKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVS-ASL  321 (454)
T ss_dssp             TTBCCEEEEECSSSCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEEC-TTC
T ss_pred             CCEeeEEEEEeCCccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEC-CCC
Confidence            47888888888778999999995 6999999853  3688999999999999999999999999999999999999 678


Q ss_pred             eeEEecccccccccCCCC-CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           79 TVKIAADSGMAKEIDAPF-DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .+++ +|||+++...... .......+++.|+|||++.+.. ++.++|+||||+++|
T Consensus       322 ~~kl-~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslG~~l~  376 (454)
T 1qcf_A          322 VCKI-ADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGS-FTIKSDVWSFGILLM  376 (454)
T ss_dssp             CEEE-CSTTGGGGBCCHHHHTTCSSSSCGGGSCHHHHHHCC-CCHHHHHHHHHHHHH
T ss_pred             cEEE-eeCCCceEcCCCceeccCCCcccccccCHHHhccCC-CCcHHHHHhHHHHHH
Confidence            8999 8999998764321 1223334577899999997665 788999999999987

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.96  E-value=1.1e-29  Score=182.65  Aligned_cols=130  Identities=22%  Similarity=0.318  Sum_probs=107.2

Q ss_pred             ccchhhhccceecceeEEEeccC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHKRENLVFEYVN-INLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++++++..+..++|||++. ++|.+++.. ...+++..+..++.|++.||+|||+++++||||||+||+++ ..+.
T Consensus       396 pniv~l~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~-~~~~  474 (613)
T 2ozo_A          396 PYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLV-NRHY  474 (613)
T ss_dssp             TTBCCEEEEEESSSEEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE-ETTE
T ss_pred             CCEeeEEEEeccCCeEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEc-CCCc
Confidence            47899999988788999999995 699999975 35699999999999999999999999999999999999999 6789


Q ss_pred             eEEecccccccccCCCCC---CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFD---AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~---~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +++ +|||+++.......   ......+++.|+|||++.+.. ++.++|+||||+++|
T Consensus       475 vkL-~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~-~~~~sDvwSlGv~l~  530 (613)
T 2ozo_A          475 AKI-SDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK-FSSRSDVWSYGVTMW  530 (613)
T ss_dssp             EEE-CCCSTTTTCC--------------CCTTSCHHHHHHCC-CCHHHHHHHHHHHHH
T ss_pred             EEE-eeccCcccccCCCceeeeccCCCCccceeCHhhhcCCC-CCcHHHHHHHHHHHH
Confidence            999 89999987643321   122334567899999997665 788999999999987

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.96  E-value=1.3e-29  Score=167.73  Aligned_cols=131  Identities=22%  Similarity=0.310  Sum_probs=110.8

Q ss_pred             ccchhhhccceecceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            2 QEMMKSMSLWVHKRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         2 ~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      .|++++++++..+..++|||++. ++|.+++.+++.+++..+..++.|++.|+.+||+++++|+||+|+||+++ ..+.+
T Consensus        78 ~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~-~~~~~  156 (291)
T 1xbb_A           78 PYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLV-TQHYA  156 (291)
T ss_dssp             TTBCCEEEEEESSSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE-ETTEE
T ss_pred             CCEEEEEEEECCCCcEEEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEe-CCCcE
Confidence            47888888887778999999996 59999999888899999999999999999999999999999999999999 66889


Q ss_pred             EEecccccccccCCCCC---CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           81 KIAADSGMAKEIDAPFD---AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~~---~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ++ +|||++........   ......+++.|+|||.+.+.. .+.++|+||||+++|+
T Consensus       157 kl-~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~  212 (291)
T 1xbb_A          157 KI-SDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK-FSSKSDVWSFGVLMWE  212 (291)
T ss_dssp             EE-CCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCE-EEHHHHHHHHHHHHHH
T ss_pred             EE-ccCCcceeeccCCCcccccccCCCCceeeChHHhccCC-CChhhhHHHHHHHHHH
Confidence            99 89999987644322   122334568899999997765 6789999999999873

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.96  E-value=4.5e-29  Score=165.12  Aligned_cols=120  Identities=21%  Similarity=0.271  Sum_probs=103.1

Q ss_pred             cceeEEEeccCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeee--cCCCeeEEeccccccc
Q 043346           14 KRENLVFEYVNINLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD--IENKTVKIAADSGMAK   90 (135)
Q Consensus        14 ~~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~--~~~~~~~i~~d~~~~~   90 (135)
                      +..+++||+++++|.+++.. ...+++..+..++.|++.|+.|||+++++|+||||+||+++  ...+.+++ +|||++.
T Consensus        78 ~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl-~Dfg~~~  156 (296)
T 3uzp_A           78 DYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYI-IDFGLAK  156 (296)
T ss_dssp             TEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEE-CCCTTCE
T ss_pred             CceEEEEEecCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEE-eeCCCcc
Confidence            36789999998899999984 46799999999999999999999999999999999999994  35678999 8999998


Q ss_pred             ccCCCCC-------CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           91 EIDAPFD-------AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        91 ~~~~~~~-------~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      .......       ......+|+.|+|||++.+.. ++.++|+||||+++|.
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~il~~  207 (296)
T 3uzp_A          157 KYRDARTHQHIPYRENKNLTGTARYASINTHLGIE-QSRRDDLESLGYVLMY  207 (296)
T ss_dssp             ECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCC-CCHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccCChhhhcCCC-CCcchhhHHHHHHHHH
Confidence            7654322       234567899999999998776 7889999999999973

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.96  E-value=8.1e-30  Score=177.01  Aligned_cols=133  Identities=17%  Similarity=0.252  Sum_probs=102.8

Q ss_pred             ccchhhhccceec-ceeEEEeccCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecC---
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNINLHKFIQQYH-PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE---   76 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~---   76 (135)
                      .||+++++.+.+. ..|+|||+++++|.+++.... ..++..+..++.|++.|+.|||+++++||||||+||+++..   
T Consensus        78 pnIv~l~~~~~~~~~~~lv~E~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~  157 (432)
T 3p23_A           78 PNVIRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAH  157 (432)
T ss_dssp             TTBCCEEEEEEETTEEEEEEECCSEEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTT
T ss_pred             CCcCeEEEEEecCCEEEEEEECCCCCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCC
Confidence            4788888888665 779999999999999998743 45556678999999999999999999999999999999522   


Q ss_pred             -CCeeEEecccccccccCCCC---CCCCCCcccccccCcccccC--CCCCCchhHHHHhhhhhhC
Q 043346           77 -NKTVKIAADSGMAKEIDAPF---DAHTTEMVILRYRAPKILFG--RTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        77 -~~~~~i~~d~~~~~~~~~~~---~~~~~~~~~~~~~ape~~~~--~~~~~~~~D~wslg~il~~  135 (135)
                       ...+++ +|||++.......   .......||+.|+|||++.+  ....+.++|+||+||++|+
T Consensus       158 ~~~~~kL-~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~e  221 (432)
T 3p23_A          158 GKIKAMI-SDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYY  221 (432)
T ss_dssp             TBCCEEE-CCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHH
T ss_pred             CceeEEE-ecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHH
Confidence             234678 8999998765332   23345679999999999974  2335778999999999873

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.96  E-value=1.3e-29  Score=166.99  Aligned_cols=131  Identities=17%  Similarity=0.341  Sum_probs=110.4

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      .|++++++++.+. ..++|||+++ ++|.+++.. ...+++..+..++.|++.|+.+||+++++|+||||+||+++ ..+
T Consensus        79 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~-~~~  157 (283)
T 3gen_A           79 EKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVN-DQG  157 (283)
T ss_dssp             TTBCCEEEEECSSSSEEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEEC-TTS
T ss_pred             CCEeeEEEEEecCCCeEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEc-CCC
Confidence            4788888888554 7899999994 699999987 56799999999999999999999999999999999999999 678


Q ss_pred             eeEEecccccccccCCCC-CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           79 TVKIAADSGMAKEIDAPF-DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      .+++ +|||++....... .......+++.|+|||.+.+.. ++.++|+||+|+++|+
T Consensus       158 ~~kl-~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~~  213 (283)
T 3gen_A          158 VVKV-SDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSK-FSSKSDIWAFGVLMWE  213 (283)
T ss_dssp             CEEE-CSTTGGGGBCCHHHHSTTSTTSCGGGCCHHHHHHCC-CSHHHHHHHHHHHHHH
T ss_pred             CEEE-ccccccccccccccccccCCccCcccCCHHHhccCC-CCchhhHHHHHHHHHH
Confidence            8999 8999998664331 1223445678899999998766 7889999999999873

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.96  E-value=1.6e-29  Score=167.78  Aligned_cols=131  Identities=22%  Similarity=0.396  Sum_probs=110.1

Q ss_pred             ccchhhhcccee---cceeEEEeccC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecC
Q 043346            2 QEMMKSMSLWVH---KRENLVFEYVN-INLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE   76 (135)
Q Consensus         2 ~~~~~~~~~~~~---~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~   76 (135)
                      +|++++++++..   +..+++||++. ++|.+++.. ...+++..+..++.|++.|+.+||+++++|+||||+||+++ .
T Consensus        83 ~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~-~  161 (302)
T 4e5w_A           83 ENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVE-S  161 (302)
T ss_dssp             TTBCCEEEEEEC---CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE-E
T ss_pred             CCeeeeeeEEecCCCceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEc-C
Confidence            467888877754   35789999995 599999965 46799999999999999999999999999999999999999 6


Q ss_pred             CCeeEEecccccccccCCCC---CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           77 NKTVKIAADSGMAKEIDAPF---DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        77 ~~~~~i~~d~~~~~~~~~~~---~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      .+.+++ +|||++.......   .......+|..|+|||++.+.. ++.++|+||+|+++|+
T Consensus       162 ~~~~kl-~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~  221 (302)
T 4e5w_A          162 EHQVKI-GDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSK-FYIASDVWSFGVTLHE  221 (302)
T ss_dssp             TTEEEE-CCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCE-EEHHHHHHHHHHHHHH
T ss_pred             CCCEEE-CcccccccccCCCcceeccCCCCCCccccCCeeecCCC-CCcchhHHHHHHHHHH
Confidence            688999 8999998765443   2334556788899999997766 6789999999999873

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.96  E-value=1.4e-29  Score=165.84  Aligned_cols=130  Identities=19%  Similarity=0.346  Sum_probs=109.1

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      .|++++++++.++ ..++|||+++ ++|.+++.. .+.+++..+..++.|++.|+.+||+++++|+||||+||+++ ..+
T Consensus        65 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~-~~~  143 (269)
T 4hcu_A           65 PKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG-ENQ  143 (269)
T ss_dssp             TTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC-GGG
T ss_pred             CCEeeEEEEEecCCceEEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEc-CCC
Confidence            4788888887554 7899999995 599999976 45689999999999999999999999999999999999998 667


Q ss_pred             eeEEecccccccccCCCC-CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           79 TVKIAADSGMAKEIDAPF-DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .+++ +|||++....... .......+++.|+|||.+.+.. ++.++|+||+|+++|
T Consensus       144 ~~kl-~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~  198 (269)
T 4hcu_A          144 VIKV-SDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSR-YSSKSDVWSFGVLMW  198 (269)
T ss_dssp             CEEE-CCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCC-CCHHHHHHHHHHHHH
T ss_pred             CEEe-ccccccccccccccccccCcccccccCCHHHhcCCC-CCchhhhHHHHHHHH
Confidence            8999 8999998664332 1233445677899999997666 788999999999987

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.96  E-value=9.5e-30  Score=166.46  Aligned_cols=130  Identities=20%  Similarity=0.357  Sum_probs=109.6

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      .|++++++++.++ ..++|||+++ ++|.+++... ..+++..+..++.|++.|+.+||+++++|+||||+||+++ ..+
T Consensus        63 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~-~~~  141 (268)
T 3sxs_A           63 PKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVD-RDL  141 (268)
T ss_dssp             TTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEEC-TTC
T ss_pred             CCEeeEEEEEccCCceEEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEEC-CCC
Confidence            4788888888555 7899999995 6999999874 4599999999999999999999999999999999999999 678


Q ss_pred             eeEEecccccccccCCCCC-CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           79 TVKIAADSGMAKEIDAPFD-AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .+++ +|||.+........ ......+++.|+|||.+.+.. ++.++|+||+|+++|
T Consensus       142 ~~~l-~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~  196 (268)
T 3sxs_A          142 CVKV-SDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFK-YSSKSDVWAFGILMW  196 (268)
T ss_dssp             CEEE-CCTTCEEECCTTCEEECCSCCCCGGGCCHHHHHHSE-EETTHHHHHHHHHHH
T ss_pred             CEEE-ccCccceecchhhhhcccCCCcCcccCCHHHHhccC-CchhhhhHHHHHHHH
Confidence            8999 89999986654322 233445677899999997766 678999999999987

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.96  E-value=7.1e-30  Score=174.54  Aligned_cols=130  Identities=23%  Similarity=0.341  Sum_probs=108.5

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      .|++++++++.++ ..++|||+++ ++|.+++... ..++...+..++.|++.|++|||+++++||||||+||+++ ..+
T Consensus       172 pniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~-~~~  250 (377)
T 3cbl_A          172 PNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVT-EKN  250 (377)
T ss_dssp             TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-TTC
T ss_pred             CCEEEEEEEEecCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEc-CCC
Confidence            4788888888654 7899999995 6999999874 4689999999999999999999999999999999999999 678


Q ss_pred             eeEEecccccccccCCCCCC--CCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           79 TVKIAADSGMAKEIDAPFDA--HTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~--~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .+++ +|||+++........  .....+++.|+|||++.+.. ++.++|+||||+++|
T Consensus       251 ~~kl-~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslG~il~  306 (377)
T 3cbl_A          251 VLKI-SDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGR-YSSESDVWSFGILLW  306 (377)
T ss_dssp             CEEE-CCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCE-EEHHHHHHHHHHHHH
T ss_pred             cEEE-CcCCCceecCCCceeecCCCCCCCcCcCCHhHhccCC-CCchhhHHHHHHHHH
Confidence            8999 899999865433211  12233567899999997665 788999999999987

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.96  E-value=2.4e-29  Score=172.20  Aligned_cols=127  Identities=25%  Similarity=0.426  Sum_probs=106.7

Q ss_pred             cchhhhccce-----ecceeEEEeccCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhC-CcccCCCCCcceeee
Q 043346            3 EMMKSMSLWV-----HKRENLVFEYVNINLHKFIQQY--HPMDSHLIKKFLYCILSGISYCHAR-KIIHRDLTTMNLLAD   74 (135)
Q Consensus         3 ~~~~~~~~~~-----~~~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~-~i~h~dl~~~nil~~   74 (135)
                      |++++++.+.     ....++|||++++++.+.+.+.  +.+++..+..++.|++.||.|||++ |++||||||+||+++
T Consensus       102 ~iv~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~  181 (397)
T 1wak_A          102 MVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLS  181 (397)
T ss_dssp             GBCCEEEEEEEEETTEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEEC
T ss_pred             eeeeeecceeecCCCCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEe
Confidence            4777777664     3378999999998888888763  5699999999999999999999998 999999999999998


Q ss_pred             cCC------------------------------------------------CeeEEecccccccccCCCCCCCCCCcccc
Q 043346           75 IEN------------------------------------------------KTVKIAADSGMAKEIDAPFDAHTTEMVIL  106 (135)
Q Consensus        75 ~~~------------------------------------------------~~~~i~~d~~~~~~~~~~~~~~~~~~~~~  106 (135)
                      .++                                                ..+++ +|||++......   .....+|+
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl-~DfG~a~~~~~~---~~~~~gt~  257 (397)
T 1wak_A          182 VNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKI-ADLGNACWVHKH---FTEDIQTR  257 (397)
T ss_dssp             CCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEE-CCGGGCEETTBC---SCSCCSCG
T ss_pred             ccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEe-cccccccccccc---CccCCCCC
Confidence            432                                                26888 899999865433   34457899


Q ss_pred             cccCcccccCCCCCCchhHHHHhhhhhh
Q 043346          107 RYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus       107 ~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .|+|||++.+.. ++.++|+|||||++|
T Consensus       258 ~y~aPE~~~~~~-~~~~~DiwslG~il~  284 (397)
T 1wak_A          258 QYRSLEVLIGSG-YNTPADIWSTACMAF  284 (397)
T ss_dssp             GGCCHHHHHTSC-CCTHHHHHHHHHHHH
T ss_pred             cccCChhhcCCC-CCcHHHHHHHHHHHH
Confidence            999999998876 788999999999997

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.96  E-value=1.6e-29  Score=169.35  Aligned_cols=131  Identities=19%  Similarity=0.323  Sum_probs=112.8

Q ss_pred             ccchhhhccceec-ceeEEEeccC--CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN--INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~--~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      .|++++++++.++ ..++++|++.  ++|.+++.+.+.+++..+..++.|++.|++|||+++++|+||+|+||+++.+.+
T Consensus       108 ~~i~~~~~~~~~~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~  187 (320)
T 3a99_A          108 SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG  187 (320)
T ss_dssp             CSBCCEEEEEECSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTT
T ss_pred             CCceEEEEEEecCCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCC
Confidence            4678888888654 7889999995  699999998889999999999999999999999999999999999999986678


Q ss_pred             eeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           79 TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      .+++ +|||++......  ......+|+.|+|||++.+....+.++|+||||+++|+
T Consensus       188 ~~kL-~Dfg~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~e  241 (320)
T 3a99_A          188 ELKL-IDFGSGALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD  241 (320)
T ss_dssp             EEEE-CCCTTCEECCSS--CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHH
T ss_pred             CEEE-eeCccccccccc--cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHH
Confidence            8999 899999876543  23445789999999999776645788999999999873

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.96  E-value=2.6e-29  Score=175.24  Aligned_cols=127  Identities=22%  Similarity=0.413  Sum_probs=106.0

Q ss_pred             ccchhhhccceec--ceeEEEeccC-CCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecC
Q 043346            2 QEMMKSMSLWVHK--RENLVFEYVN-INLHKFIQQYHP--MDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE   76 (135)
Q Consensus         2 ~~~~~~~~~~~~~--~~~lv~e~~~-~~L~~~~~~~~~--~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~   76 (135)
                      .|++++++++.+.  ..++|||++. ++|.+++.+.+.  +++..+..++.|++.|++|||+++++||||||+||+++ .
T Consensus       246 ~niv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~-~  324 (450)
T 1k9a_A          246 SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVS-E  324 (450)
T ss_dssp             TTBCCEEEEEECTTSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC-T
T ss_pred             CCEEEEEEEEEcCCCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEC-C
Confidence            4788888886443  6899999995 699999987543  78999999999999999999999999999999999999 6


Q ss_pred             CCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           77 NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        77 ~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .+.+++ +|||+++.....   .....+++.|+|||++.+.. ++.++|+||||+++|
T Consensus       325 ~~~~kl-~DfG~a~~~~~~---~~~~~~~~~y~aPE~~~~~~-~~~~sDvwslG~~l~  377 (450)
T 1k9a_A          325 DNVAKV-SDFGLTKEASST---QDTGKLPVKWTAPEALREKK-FSTKSDVWSFGILLW  377 (450)
T ss_dssp             TSCEEE-CCCTTCEECC---------CCCTTTSCHHHHHSSC-CCHHHHHHHHHHHHH
T ss_pred             CCCEEE-eeCCCccccccc---ccCCCCCcceeCHHHhcCCC-CCcHHHHHHHHHHHH
Confidence            788999 899999854332   22235678899999998776 788999999999987

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.96  E-value=8.7e-29  Score=163.57  Aligned_cols=129  Identities=23%  Similarity=0.363  Sum_probs=109.0

Q ss_pred             ccchhhhcccee-----cceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCC--cccCCCCCcceee
Q 043346            2 QEMMKSMSLWVH-----KRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARK--IIHRDLTTMNLLA   73 (135)
Q Consensus         2 ~~~~~~~~~~~~-----~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~--i~h~dl~~~nil~   73 (135)
                      .|++++++++..     ...++|||+++ ++|.+++...+.+++..+..++.|++.|+.|||+++  ++|+||+|+||++
T Consensus        85 ~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~  164 (290)
T 1t4h_A           85 PNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFI  164 (290)
T ss_dssp             TTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEE
T ss_pred             CCeeeeeeeeccccCCCceEEEEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEE
Confidence            467788777643     35789999995 699999998888999999999999999999999999  9999999999999


Q ss_pred             ecCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           74 DIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        74 ~~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +...+.+++ +|||++......  ......+++.|+|||++.+.  ++.++|+||+|+++|.
T Consensus       165 ~~~~~~~kl-~Dfg~~~~~~~~--~~~~~~~t~~y~aPE~~~~~--~~~~~Di~slG~~l~~  221 (290)
T 1t4h_A          165 TGPTGSVKI-GDLGLATLKRAS--FAKAVIGTPEFMAPEMYEEK--YDESVDVYAFGMCMLE  221 (290)
T ss_dssp             SSTTSCEEE-CCTTGGGGCCTT--SBEESCSSCCCCCGGGGGTC--CCTHHHHHHHHHHHHH
T ss_pred             ECCCCCEEE-eeCCCccccccc--ccccccCCcCcCCHHHHhcc--CCCcchHHHHHHHHHH
Confidence            856788999 899999754433  23345689999999988754  6789999999999873

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=1.7e-29  Score=172.54  Aligned_cols=131  Identities=23%  Similarity=0.341  Sum_probs=100.2

Q ss_pred             ccchhhhccce--ecceeEEEeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC
Q 043346            2 QEMMKSMSLWV--HKRENLVFEYVN-INLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN   77 (135)
Q Consensus         2 ~~~~~~~~~~~--~~~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~   77 (135)
                      .|++++++++.  ++..++|||+++ ++|.+++.+. ..++...+..++.|++.|+.|||+++++||||||+||+++ ..
T Consensus       150 pnIv~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~-~~  228 (373)
T 3c1x_A          150 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLD-EK  228 (373)
T ss_dssp             TTBCCCCEEECCCSSCCEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC-TT
T ss_pred             CCcceEEEEEEcCCCCeEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEEC-CC
Confidence            47888888753  347899999995 5999999864 4688999999999999999999999999999999999999 67


Q ss_pred             CeeEEecccccccccCCCCC----CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           78 KTVKIAADSGMAKEIDAPFD----AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~----~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +.+++ +|||+++.......    ......+++.|+|||++.+.. ++.++|+||||+++|+
T Consensus       229 ~~~kL-~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwSlG~il~e  288 (373)
T 3c1x_A          229 FTVKV-ADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQK-FTTKSDVWSFGVLLWE  288 (373)
T ss_dssp             CCEEE-CCC---------------------CCGGGSCHHHHHHCC-CCHHHHHHHHHHHHHH
T ss_pred             CCEEE-eeccccccccccccccccccCCCCCcccccChHHhcCCC-CCcHHHHHHHHHHHHH
Confidence            88999 89999986543211    223445678899999997766 7889999999999973

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.96  E-value=1.9e-29  Score=166.85  Aligned_cols=131  Identities=21%  Similarity=0.265  Sum_probs=99.2

Q ss_pred             ccchhhhccceecceeEEEeccC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHKRENLVFEYVN-INLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|+++++++...+..++|||+++ ++|.+++.. ...+++..+..++.|++.|+.+||+++++|+||||+||+++ ..+.
T Consensus        80 ~~iv~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~-~~~~  158 (289)
T 3og7_A           80 VNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLH-EDNT  158 (289)
T ss_dssp             TTBCCEEEEECSSSCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE-TTTE
T ss_pred             CcEEEEEeeccCCccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEEC-CCCC
Confidence            46788888777778999999996 599999965 45789999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCC--CCCCCCCcccccccCcccccC--CCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAP--FDAHTTEMVILRYRAPKILFG--RTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~--~~~~~~~~~~~~~~ape~~~~--~~~~~~~~D~wslg~il~  134 (135)
                      +++ +|||++......  ........+|+.|+|||++..  ...++.++|+||||+++|
T Consensus       159 ~kl-~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~  216 (289)
T 3og7_A          159 VKI-GDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLY  216 (289)
T ss_dssp             EEE-CCCC------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHH
T ss_pred             EEE-ccceeccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHH
Confidence            999 899998765432  122344578999999999862  233677999999999987

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.96  E-value=2.3e-29  Score=170.85  Aligned_cols=130  Identities=26%  Similarity=0.448  Sum_probs=101.5

Q ss_pred             ccchhhhcccee------cceeEEEeccCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeee
Q 043346            2 QEMMKSMSLWVH------KRENLVFEYVNINLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD   74 (135)
Q Consensus         2 ~~~~~~~~~~~~------~~~~lv~e~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~   74 (135)
                      .|++++++++..      ...++|||+++++|.+.+... ..+++..+..++.|++.|+.|||+++++|+||||+||+++
T Consensus        89 ~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~  168 (362)
T 3pg1_A           89 PNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLA  168 (362)
T ss_dssp             TTBCCCSEEEEECCTTTCCEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC
T ss_pred             cCccceeeeEEeccCCCcceEEEEEccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEc
Confidence            467788777632      157899999999999998764 4789999999999999999999999999999999999998


Q ss_pred             cCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           75 IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        75 ~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                       ..+.+++ +|||++...... .......+++.|+|||++.+...++.++|+||+|+++|
T Consensus       169 -~~~~~kl-~Dfg~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~  225 (362)
T 3pg1_A          169 -DNNDITI-CDFNLAREDTAD-ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMA  225 (362)
T ss_dssp             -TTCCEEE-CCTTC----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHH
T ss_pred             -CCCCEEE-EecCcccccccc-cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHH
Confidence             6788999 899999755433 23445578899999999987555889999999999987

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.96  E-value=3.7e-29  Score=165.86  Aligned_cols=131  Identities=24%  Similarity=0.362  Sum_probs=107.7

Q ss_pred             ccchhhhccce--ecceeEEEeccC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC
Q 043346            2 QEMMKSMSLWV--HKRENLVFEYVN-INLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN   77 (135)
Q Consensus         2 ~~~~~~~~~~~--~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~   77 (135)
                      +|++++++++.  ++..+++||+++ ++|.+++.. ...++...+..++.|++.|+.+||+++++|+||||+||+++ ..
T Consensus        86 ~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~-~~  164 (298)
T 3f66_A           86 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD-EK  164 (298)
T ss_dssp             TTBCCCCEEECCSSSCCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC-TT
T ss_pred             CCEeeeeeEEEcCCCceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEC-CC
Confidence            47888888742  347889999996 599999976 45689999999999999999999999999999999999999 67


Q ss_pred             CeeEEecccccccccCCCC----CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           78 KTVKIAADSGMAKEIDAPF----DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~----~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +.+++ +|||++.......    .......+++.|+|||.+.+.. +++++|+||+|+++|.
T Consensus       165 ~~~kl-~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~  224 (298)
T 3f66_A          165 FTVKV-ADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK-FTTKSDVWSFGVLLWE  224 (298)
T ss_dssp             CCEEE-CSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCC-CCHHHHHHHHHHHHHH
T ss_pred             CCEEE-CcccccccccccchhccccccCCCCCccccChHHhcCCC-CChHHHHHHHHHHHHH
Confidence            88999 8999998664332    2234456778899999997766 7889999999999873

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.96  E-value=5.9e-29  Score=164.77  Aligned_cols=131  Identities=21%  Similarity=0.347  Sum_probs=111.4

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++++.+..+ ..++|||+++ ++|.+++..+..+++..+..++.|++.|+.+||+++++|+||+|+||+++ ..+.
T Consensus        84 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~-~~~~  162 (298)
T 1phk_A           84 PNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD-DDMN  162 (298)
T ss_dssp             TTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-TTCC
T ss_pred             CCEeeeeeeeccCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEc-CCCc
Confidence            4678888888555 7899999996 69999999888899999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCccccc-----CCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILF-----GRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~-----~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||.+...... .......+++.|+|||++.     ....++.++|+||||+++|.
T Consensus       163 ~kl-~dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~  221 (298)
T 1phk_A          163 IKL-TDFGFSCQLDPG-EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYT  221 (298)
T ss_dssp             EEE-CCCTTCEECCTT-CCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHH
T ss_pred             EEE-ecccchhhcCCC-cccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHH
Confidence            999 899999876543 2334567899999999985     23336789999999999873

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.96  E-value=9.3e-30  Score=173.52  Aligned_cols=127  Identities=25%  Similarity=0.486  Sum_probs=95.3

Q ss_pred             ccchhhhcccee-------cceeEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeee
Q 043346            2 QEMMKSMSLWVH-------KRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD   74 (135)
Q Consensus         2 ~~~~~~~~~~~~-------~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~   74 (135)
                      .|++++++++..       ...++++|+++++|.+++.. +.+++..+..++.|++.|++|||++|++||||||+||+++
T Consensus        88 pnIv~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~  166 (367)
T 2fst_X           88 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN  166 (367)
T ss_dssp             TTBCCCSEEECSCSSGGGCCCCEEEEECCCEECC------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC
T ss_pred             CCCCcEEEEEecCCccccCCeEEEEecccCCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEEC
Confidence            467777777643       35799999998899988876 6799999999999999999999999999999999999999


Q ss_pred             cCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           75 IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        75 ~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                       .++.+++ +|||+++.....   .....+|+.|+|||++.+...++.++|+||+||++|
T Consensus       167 -~~~~~kL-~DFG~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~  221 (367)
T 2fst_X          167 -EDCELKI-LDFGLARHTADE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA  221 (367)
T ss_dssp             -TTCCEEE-CC------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHH
T ss_pred             -CCCCEEE-eecccccccccc---CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHH
Confidence             6788999 899999865432   344678999999999987555788999999999987

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.96  E-value=8e-29  Score=166.27  Aligned_cols=128  Identities=23%  Similarity=0.472  Sum_probs=108.4

Q ss_pred             ccchhhhcccee---cceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC
Q 043346            2 QEMMKSMSLWVH---KRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN   77 (135)
Q Consensus         2 ~~~~~~~~~~~~---~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~   77 (135)
                      .|++++++++.+   ...+++||+++ ++|.+++..   +++..+..++.|++.|++|||++|++|+||||+||+++.++
T Consensus        91 ~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~  167 (330)
T 3nsz_A           91 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEH  167 (330)
T ss_dssp             TTBCCEEEEEECTTTCCEEEEEECCCCCCHHHHGGG---CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTT
T ss_pred             CCEEEeeeeeccCCCCceEEEEeccCchhHHHHHHh---CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCC
Confidence            467888887754   36789999996 599888754   88999999999999999999999999999999999999655


Q ss_pred             CeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           78 KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ..+++ +|||++...... .......+++.|+|||++.+...++.++|+||||+++|
T Consensus       168 ~~~kl-~Dfg~a~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~  222 (330)
T 3nsz_A          168 RKLRL-IDWGLAEFYHPG-QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA  222 (330)
T ss_dssp             TEEEE-CCCTTCEECCTT-CCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHH
T ss_pred             CEEEE-EeCCCceEcCCC-CccccccccccccChhhhcCCCcCCchhhHHHHHHHHH
Confidence            58999 899999866543 33445678999999999987555889999999999987

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.96  E-value=1.1e-29  Score=170.83  Aligned_cols=129  Identities=26%  Similarity=0.393  Sum_probs=102.5

Q ss_pred             cchhhhccc------eecceeEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhC---------CcccCCC
Q 043346            3 EMMKSMSLW------VHKRENLVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHAR---------KIIHRDL   66 (135)
Q Consensus         3 ~~~~~~~~~------~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~---------~i~h~dl   66 (135)
                      |+++++..+      .+...++||||+ +++|.+++.. ...++..+..++.|++.|+.|||+.         +++||||
T Consensus        68 ~i~~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Di  146 (336)
T 3g2f_A           68 NIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSL-HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDL  146 (336)
T ss_dssp             TBCCEEEEEEEECTTSCEEEEEEECCCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSC
T ss_pred             chhhheecccccccCCCceEEEEEecCCCCcHHHHHhh-cccchhHHHHHHHHHHHHHHHHHhhhccccccccceeeccc
Confidence            566665422      222568999999 5699999977 4458899999999999999999999         9999999


Q ss_pred             CCcceeeecCCCeeEEecccccccccCCCC--------CCCCCCcccccccCcccccCC------CCCCchhHHHHhhhh
Q 043346           67 TTMNLLADIENKTVKIAADSGMAKEIDAPF--------DAHTTEMVILRYRAPKILFGR------TNCFAAIDMWAVLYL  132 (135)
Q Consensus        67 ~~~nil~~~~~~~~~i~~d~~~~~~~~~~~--------~~~~~~~~~~~~~ape~~~~~------~~~~~~~D~wslg~i  132 (135)
                      ||+||+++ ..+.+++ +|||++.......        .......+|+.|+|||++.+.      ..++.++|+||||++
T Consensus       147 kp~Nill~-~~~~~kL-~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~i  224 (336)
T 3g2f_A          147 NSRNVLVK-NDGTCVI-SDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLI  224 (336)
T ss_dssp             SGGGEEEC-TTSCEEE-CCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHH
T ss_pred             ccceEEEc-CCCcEEE-eeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHH
Confidence            99999999 6688999 8999998664321        122345789999999999763      124568999999999


Q ss_pred             hh
Q 043346          133 LR  134 (135)
Q Consensus       133 l~  134 (135)
                      +|
T Consensus       225 l~  226 (336)
T 3g2f_A          225 YW  226 (336)
T ss_dssp             HH
T ss_pred             HH
Confidence            87

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.96  E-value=2.9e-29  Score=166.89  Aligned_cols=129  Identities=24%  Similarity=0.313  Sum_probs=109.3

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeee--cCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD--IEN   77 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~--~~~   77 (135)
                      .|++++++++.+. ..+++||+++ ++|.+++.+.+.+++..+..++.|++.|+.+||+++++|+||+|+||++.  ...
T Consensus        66 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~  145 (304)
T 2jam_A           66 ENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEEN  145 (304)
T ss_dssp             TTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTT
T ss_pred             CCeeehhhhcccCCEEEEEEEcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCC
Confidence            4678888877555 7899999995 69999998888899999999999999999999999999999999999993  256


Q ss_pred             CeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           78 KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +.+++ +|||++......  ......+++.|+|||++.+.. ++.++|+||+|+++|
T Consensus       146 ~~~kl-~Dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~  198 (304)
T 2jam_A          146 SKIMI-TDFGLSKMEQNG--IMSTACGTPGYVAPEVLAQKP-YSKAVDCWSIGVITY  198 (304)
T ss_dssp             CCEEB-CSCSTTCCCCCB--TTHHHHSCCCBCCTTTBSSCS-CCHHHHHHHHHHHHH
T ss_pred             CCEEE-ccCCcceecCCC--ccccccCCCCccChHHhccCC-CCchhhHHHHHHHHH
Confidence            78899 899998754332  223446889999999998766 788999999999987

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.96  E-value=2.8e-29  Score=169.83  Aligned_cols=130  Identities=25%  Similarity=0.459  Sum_probs=107.4

Q ss_pred             ccchhhhcccee------cceeEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeec
Q 043346            2 QEMMKSMSLWVH------KRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI   75 (135)
Q Consensus         2 ~~~~~~~~~~~~------~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~   75 (135)
                      .|++++++++..      ...+++||+++++|.+++.. +.+++..+..++.|++.|+.|||++|++|+||||+||+++ 
T Consensus        69 ~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~-  146 (353)
T 2b9h_A           69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIST-QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLIN-  146 (353)
T ss_dssp             TTBCCEEEECCCSCSTTCCCEEEEECCCSEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC-
T ss_pred             CCcCCeeeeecccccCccceEEEEEeccCccHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEc-
Confidence            367777765532      46899999999999999987 6799999999999999999999999999999999999999 


Q ss_pred             CCCeeEEecccccccccCCCCC----------CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           76 ENKTVKIAADSGMAKEIDAPFD----------AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        76 ~~~~~~i~~d~~~~~~~~~~~~----------~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ..+.+++ +|||++........          ......+|+.|+|||++.+...++.++|+||||+++|
T Consensus       147 ~~~~~kl-~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~  214 (353)
T 2b9h_A          147 SNCDLKV-CDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILA  214 (353)
T ss_dssp             TTCCEEE-CCCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHH
T ss_pred             CCCcEEE-EecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHH
Confidence            6788999 89999987643211          1223578999999999876555889999999999987

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.96  E-value=8.2e-29  Score=167.29  Aligned_cols=126  Identities=21%  Similarity=0.390  Sum_probs=105.5

Q ss_pred             chhhhcccee-cceeEEEeccCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeee------
Q 043346            4 MMKSMSLWVH-KRENLVFEYVNINLHKFIQQY--HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD------   74 (135)
Q Consensus         4 ~~~~~~~~~~-~~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~------   74 (135)
                      ++...+++.. +..++|||++++++.+++...  ..+++..+..++.|++.||.|||+++++|+||||+||++.      
T Consensus        84 ~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~  163 (355)
T 2eu9_A           84 CVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFET  163 (355)
T ss_dssp             BCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEE
T ss_pred             EEEeeeeeeeCCeEEEEEeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccc
Confidence            4555565543 478999999998999988764  3689999999999999999999999999999999999993      


Q ss_pred             ------------cCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           75 ------------IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        75 ------------~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                                  ...+.+++ +|||++......   .....+|+.|+|||++.+.. ++.++|+||||+++|
T Consensus       164 ~~~~~~~~~~~~~~~~~~kl-~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~il~  230 (355)
T 2eu9_A          164 LYNEHKSCEEKSVKNTSIRV-ADFGSATFDHEH---HTTIVATRHYRPPEVILELG-WAQPCDVWSIGCILF  230 (355)
T ss_dssp             EECCC-CCCEEEESCCCEEE-CCCTTCEETTSC---CCSSCSCGGGCCHHHHTTCC-CCTHHHHHHHHHHHH
T ss_pred             cccccccccccccCCCcEEE-eecCcccccccc---ccCCcCCCcccCCeeeecCC-CCCccchHHHHHHHH
Confidence                        14678899 899999764332   34557899999999998766 788999999999987

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.96  E-value=1e-29  Score=170.30  Aligned_cols=132  Identities=24%  Similarity=0.354  Sum_probs=110.1

Q ss_pred             ccchhhhccceecceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC--C
Q 043346            2 QEMMKSMSLWVHKRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN--K   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~--~   78 (135)
                      .|++++++++..+..++|||++. ++|.+++..+..+++..+..++.|++.|+.|||+++++|+||+|+||+++.+.  .
T Consensus        75 ~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~  154 (322)
T 2ycf_A           75 PCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDC  154 (322)
T ss_dssp             TTBCCEEEEEESSSEEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSC
T ss_pred             CCCceEeeEEcCCceEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCC
Confidence            47888888887778999999996 59999998888899999999999999999999999999999999999998432  2


Q ss_pred             eeEEecccccccccCCCCCCCCCCcccccccCccccc--CCCCCCchhHHHHhhhhhhC
Q 043346           79 TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILF--GRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~--~~~~~~~~~D~wslg~il~~  135 (135)
                      .+++ +|||++...... .......+++.|+|||++.  +...++.++|+||||+++|+
T Consensus       155 ~~kl-~Dfg~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~  211 (322)
T 2ycf_A          155 LIKI-TDFGHSKILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFI  211 (322)
T ss_dssp             CEEE-CCCTTCEECCCC-HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHH
T ss_pred             eEEE-ccCccceecccc-cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHH
Confidence            4889 899999866433 2223456889999999974  23347889999999999873

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.96  E-value=3.9e-29  Score=166.84  Aligned_cols=120  Identities=31%  Similarity=0.586  Sum_probs=100.8

Q ss_pred             cceeEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEecccccccccC
Q 043346           14 KRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEID   93 (135)
Q Consensus        14 ~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~~~   93 (135)
                      +..++|||+++++|.+++.+ +++++..+..++.|++.|+++||++|++|+||||+||+++..++.+++ +|||++....
T Consensus        95 ~~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl-~Dfg~~~~~~  172 (320)
T 2i6l_A           95 NSVYIVQEYMETDLANVLEQ-GPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKI-GDFGLARIMD  172 (320)
T ss_dssp             SEEEEEEECCSEEHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEE-CCCTTCBCC-
T ss_pred             CceeEEeeccCCCHHHHhhc-CCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEE-ccCccccccC
Confidence            47899999999999999976 678999999999999999999999999999999999999866678999 8999998764


Q ss_pred             CCC---CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           94 APF---DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        94 ~~~---~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ...   .......+++.|+|||.+.+...++.++|+||||+++|.
T Consensus       173 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~e  217 (320)
T 2i6l_A          173 PHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAE  217 (320)
T ss_dssp             -------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHH
T ss_pred             CCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHH
Confidence            321   223345668899999998765557889999999999873

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=7.1e-29  Score=164.30  Aligned_cols=131  Identities=23%  Similarity=0.352  Sum_probs=109.9

Q ss_pred             ccchhhhccceec--ceeEEEecc-CCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC
Q 043346            2 QEMMKSMSLWVHK--RENLVFEYV-NINLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN   77 (135)
Q Consensus         2 ~~~~~~~~~~~~~--~~~lv~e~~-~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~   77 (135)
                      .|++++++++.+.  ..+++||++ +++|.+++.. ...+++..+..++.|++.|+.|||++|++|+||||+||+++ ..
T Consensus        82 ~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~-~~  160 (298)
T 3pls_A           82 PNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLD-ES  160 (298)
T ss_dssp             TTBCCCCEEECCSSSCCEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC-TT
T ss_pred             CCeeeEEEEEecCCCCcEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEc-CC
Confidence            4788888888543  348999999 5799999987 45789999999999999999999999999999999999999 67


Q ss_pred             CeeEEecccccccccCCC----CCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           78 KTVKIAADSGMAKEIDAP----FDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~----~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +.+++ +|||++......    ........+++.|+|||.+.+.. ++.++|+||+|+++|.
T Consensus       161 ~~~kl-~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~  220 (298)
T 3pls_A          161 FTVKV-ADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYR-FTTKSDVWSFGVLLWE  220 (298)
T ss_dssp             CCEEE-CCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCC-CCHHHHHHHHHHHHHH
T ss_pred             CcEEe-CcCCCcccccCCcccccccCcCCCCCccccChhhhccCC-CChhhchhhHHHHHHH
Confidence            88999 899999765432    12334556788999999998766 7889999999999873

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.96  E-value=1.3e-29  Score=169.75  Aligned_cols=131  Identities=23%  Similarity=0.301  Sum_probs=109.7

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeec
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYH----PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI   75 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~   75 (135)
                      .|++++++++.++ ..++|||++. ++|.+++....    .+++..+..++.|++.|+.|||+++++|+||||+||+++ 
T Consensus        95 ~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~-  173 (321)
T 2qkw_B           95 PHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLD-  173 (321)
T ss_dssp             TTBCCEEEECCCTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEEC-
T ss_pred             CCEeeEEEEEcCCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEEC-
Confidence            4788888888554 7899999995 69999886532    589999999999999999999999999999999999999 


Q ss_pred             CCCeeEEecccccccccCCCC--CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           76 ENKTVKIAADSGMAKEIDAPF--DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        76 ~~~~~~i~~d~~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      .++.+++ +|||++.......  .......+|+.|+|||++.+.. ++.++|+||||+++|.
T Consensus       174 ~~~~~kl-~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~il~e  233 (321)
T 2qkw_B          174 ENFVPKI-TDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGR-LTEKSDVYSFGVVLFE  233 (321)
T ss_dssp             TTCCEEE-CCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCB-CCTHHHHHHHHHHHHH
T ss_pred             CCCCEEE-eecccccccccccccccccccCCCccccCHHHhcCCC-CCcccchHhHHHHHHH
Confidence            6788999 8999997654321  2234456899999999997766 7889999999999873

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.96  E-value=1.3e-29  Score=170.11  Aligned_cols=130  Identities=25%  Similarity=0.358  Sum_probs=106.9

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHhhCCccc
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYH----------------PMDSHLIKKFLYCILSGISYCHARKIIH   63 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~----------------~~~~~~~~~~~~~i~~~l~~lh~~~i~h   63 (135)
                      .|++++++++.+. ..++|||+++ ++|.+++.+..                .+++..+..++.|++.|+.+||+++++|
T Consensus        86 p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH  165 (327)
T 1fvr_A           86 PNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIH  165 (327)
T ss_dssp             TTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             CchhhhceeeeeCCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccC
Confidence            4788888888655 7899999995 69999998643                6899999999999999999999999999


Q ss_pred             CCCCCcceeeecCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           64 RDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        64 ~dl~~~nil~~~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +||||+||+++ ..+.+++ +|||++...... .......+++.|+|||++.+.. ++.++|+||||+++|+
T Consensus       166 ~dlkp~NIl~~-~~~~~kL-~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~e  233 (327)
T 1fvr_A          166 RDLAARNILVG-ENYVAKI-ADFGLSRGQEVY-VKKTMGRLPVRWMAIESLNYSV-YTTNSDVWSYGVLLWE  233 (327)
T ss_dssp             SCCSGGGEEEC-GGGCEEE-CCTTCEESSCEE-CCC----CCTTTCCHHHHHHCE-ECHHHHHHHHHHHHHH
T ss_pred             CCCccceEEEc-CCCeEEE-cccCcCcccccc-ccccCCCCCccccChhhhcccc-CCchhcchHHHHHHHH
Confidence            99999999998 6678999 899998744322 2233445678899999997665 6789999999999873

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.96  E-value=2.4e-29  Score=168.49  Aligned_cols=130  Identities=21%  Similarity=0.342  Sum_probs=99.7

Q ss_pred             ccchhhhccceec-ce------eEEEeccC-CCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCC
Q 043346            2 QEMMKSMSLWVHK-RE------NLVFEYVN-INLHKFIQQYH------PMDSHLIKKFLYCILSGISYCHARKIIHRDLT   67 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~------~lv~e~~~-~~L~~~~~~~~------~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~   67 (135)
                      .|++++++++... ..      +++||++. ++|.+++....      .+++..+..++.|++.|+.|||++|++|+|||
T Consensus        85 ~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dik  164 (323)
T 3qup_A           85 PHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLA  164 (323)
T ss_dssp             TTBCCCCEEEECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             CceehhhceeeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCC
Confidence            4678888877544 22      89999995 59999997532      58999999999999999999999999999999


Q ss_pred             CcceeeecCCCeeEEecccccccccCCCC--CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           68 TMNLLADIENKTVKIAADSGMAKEIDAPF--DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        68 ~~nil~~~~~~~~~i~~d~~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      |+||+++ ..+.+++ +|||++.......  .......+++.|+|||.+.+.. ++.++|+||||+++|
T Consensus       165 p~NIli~-~~~~~kl-~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~  230 (323)
T 3qup_A          165 ARNCMLA-EDMTVCV-ADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNL-YTVHSDVWAFGVTMW  230 (323)
T ss_dssp             GGGEEEC-TTSCEEE-CCCCC-----------------CCGGGCCHHHHHHCC-CCHHHHHHHHHHHHH
T ss_pred             cceEEEc-CCCCEEE-eeccccccccccccccccccccCcccccCchhhcCCC-CCCccchhhHHHHHH
Confidence            9999999 6788999 8999998664332  2223445677899999997766 788999999999987

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.96  E-value=3e-29  Score=168.85  Aligned_cols=130  Identities=26%  Similarity=0.444  Sum_probs=109.1

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHhhCCccc
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYH----------------PMDSHLIKKFLYCILSGISYCHARKIIH   63 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~----------------~~~~~~~~~~~~~i~~~l~~lh~~~i~h   63 (135)
                      +|++++++++.++ ..++|||++. ++|.+++....                .+++..+..++.|++.|+.|||+++++|
T Consensus       101 p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH  180 (334)
T 2pvf_A          101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIH  180 (334)
T ss_dssp             TTBCCEEEEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             CCEeeEEEEEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeC
Confidence            4788888887554 7899999995 59999998643                3889999999999999999999999999


Q ss_pred             CCCCCcceeeecCCCeeEEecccccccccCCCCC--CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           64 RDLTTMNLLADIENKTVKIAADSGMAKEIDAPFD--AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        64 ~dl~~~nil~~~~~~~~~i~~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +||||+||+++ ..+.+++ +|||++........  ......+++.|+|||++.+.. ++.++|+||||+++|
T Consensus       181 ~Dlkp~NIll~-~~~~~kL-~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~  250 (334)
T 2pvf_A          181 RDLAARNVLVT-ENNVMKI-ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMW  250 (334)
T ss_dssp             SCCSGGGEEEC-TTCCEEE-CCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCE-ECHHHHHHHHHHHHH
T ss_pred             CCCccceEEEc-CCCCEEE-ccccccccccccccccccCCCCcccceeChHHhcCCC-cChHHHHHHHHHHHH
Confidence            99999999999 6788999 89999987654322  223445678899999997765 788999999999987

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.96  E-value=4.8e-29  Score=164.66  Aligned_cols=130  Identities=18%  Similarity=0.337  Sum_probs=103.8

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeec
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQ----YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI   75 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~   75 (135)
                      .|++++++++.+. ..++|||+++ ++|.+++..    ...+++..+..++.|++.|+++||+++++|+||+|+||+++.
T Consensus        80 p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~  159 (285)
T 3is5_A           80 PNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQD  159 (285)
T ss_dssp             TTBCCEEEEEECSSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESS
T ss_pred             chHHhHHHheecCCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEec
Confidence            4788888888654 7899999995 599998864    367999999999999999999999999999999999999953


Q ss_pred             --CCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           76 --ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        76 --~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                        ..+.+++ +|||++...... .......+++.|+|||++.+.  .+.++|+||+|+++|+
T Consensus       160 ~~~~~~~kl-~Dfg~a~~~~~~-~~~~~~~~t~~y~aPE~~~~~--~~~~~Di~slG~il~~  217 (285)
T 3is5_A          160 TSPHSPIKI-IDFGLAELFKSD-EHSTNAAGTALYMAPEVFKRD--VTFKCDIWSAGVVMYF  217 (285)
T ss_dssp             SSTTCCEEE-CCCCCCCC-----------CTTGGGCCHHHHTTC--CCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEE-EeeecceecCCc-ccCcCcccccCcCChHHhccC--CCcccCeehHHHHHHH
Confidence              3467899 899999766443 233456789999999998643  6789999999999873

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.96  E-value=1.6e-29  Score=169.90  Aligned_cols=131  Identities=23%  Similarity=0.332  Sum_probs=106.3

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeec--
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQ--YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI--   75 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~--   75 (135)
                      .|++++++++.+. ..++|||++. ++|.+++..  .+.+++..+..++.|++.|+++||++|++|+||||+||+++.  
T Consensus        89 ~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~  168 (327)
T 3lm5_A           89 PRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIY  168 (327)
T ss_dssp             TTBCCEEEEEECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBT
T ss_pred             CCEEEEEEEEEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCC
Confidence            4678888888555 7899999996 599998865  367999999999999999999999999999999999999984  


Q ss_pred             CCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           76 ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        76 ~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ..+.+++ +|||++...... .......+++.|+|||++.+.. ++.++|+||||+++|.
T Consensus       169 ~~~~~kL-~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~~  225 (327)
T 3lm5_A          169 PLGDIKI-VDFGMSRKIGHA-CELREIMGTPEYLAPEILNYDP-ITTATDMWNIGIIAYM  225 (327)
T ss_dssp             TBCCEEE-CCGGGCEEC----------CCCGGGCCHHHHTTCC-CCTHHHHHHHHHHHHH
T ss_pred             CCCcEEE-eeCccccccCCc-cccccccCCcCccCCeeecCCC-CCchhhHHHHHHHHHH
Confidence            2578899 899999876543 2334467899999999998766 7889999999999873

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.96  E-value=5.8e-29  Score=164.77  Aligned_cols=119  Identities=29%  Similarity=0.428  Sum_probs=96.0

Q ss_pred             cceeEEEeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEecccccccc
Q 043346           14 KRENLVFEYVN-INLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKE   91 (135)
Q Consensus        14 ~~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~   91 (135)
                      +..++|||+++ ++|.+++... ..+++..+..++.|++.|+.+||+++++|+||+|+||+++ .++.+++ +|||++..
T Consensus        88 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~-~~~~~kl-~dfg~~~~  165 (303)
T 1zy4_A           88 STLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFID-ESRNVKI-GDFGLAKN  165 (303)
T ss_dssp             EEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC-TTSCEEE-CCCCCCSC
T ss_pred             CceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEc-CCCCEEE-eeCcchhh
Confidence            47899999995 6999999864 3678899999999999999999999999999999999998 6788999 89999976


Q ss_pred             cCCCC--------------CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           92 IDAPF--------------DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        92 ~~~~~--------------~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .....              .......+++.|+|||++.+...++.++|+||+|+++|
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~  222 (303)
T 1zy4_A          166 VHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFF  222 (303)
T ss_dssp             TTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHH
T ss_pred             cccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHH
Confidence            54221              12344568899999999987655788999999999987

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.96  E-value=1.6e-29  Score=176.40  Aligned_cols=130  Identities=23%  Similarity=0.343  Sum_probs=105.5

Q ss_pred             ccchhhhccceecceeEEEeccC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHKRENLVFEYVN-INLHKFIQQ--YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      .|++++++++.++..++|||++. ++|.+++..  ...++...+..++.|++.||+|||+++++||||||+||+++ .++
T Consensus       239 p~iv~~~~~~~~~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~-~~~  317 (452)
T 1fmk_A          239 EKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG-ENL  317 (452)
T ss_dssp             TTBCCEEEEECSSSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC-GGG
T ss_pred             CCEeeEEEEEcCCceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEC-CCC
Confidence            47888888888788999999995 699999975  35689999999999999999999999999999999999998 668


Q ss_pred             eeEEecccccccccCCCC-CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           79 TVKIAADSGMAKEIDAPF-DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .+++ +|||+++...... .......+++.|+|||++.+.. ++.++|+||||+++|
T Consensus       318 ~~kl-~DfG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~sDvwslG~~l~  372 (452)
T 1fmk_A          318 VCKV-ADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKSDVWSFGILLT  372 (452)
T ss_dssp             CEEE-CCCCTTC--------------CCGGGSCHHHHHHCC-CCHHHHHHHHHHHHH
T ss_pred             CEEE-CCCccceecCCCceecccCCcccccccCHhHHhcCC-CCccccHHhHHHHHH
Confidence            8999 8999998764332 2223345677899999997765 788999999999987

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.96  E-value=1.7e-29  Score=165.68  Aligned_cols=132  Identities=26%  Similarity=0.339  Sum_probs=111.5

Q ss_pred             ccchhhhccceec-ceeEEEeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++++++.+. ..++|||++++ +|.+++.....+++..+..++.|++.|+.+||+++++|+||+|+||+++ ..+.
T Consensus        65 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~-~~~~  143 (276)
T 2yex_A           65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDN  143 (276)
T ss_dssp             TTBCCEEEEEEETTEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-TTCC
T ss_pred             CCceeeeeEEEcCCEEEEEEEecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEc-cCCC
Confidence            4678888887655 77899999964 9999998777899999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCC--CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPF--DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||.+.......  .......+++.|+|||.+.+....+.++|+||||+++|+
T Consensus       144 ~kl-~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~  200 (276)
T 2yex_A          144 LKI-SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTA  200 (276)
T ss_dssp             EEE-CCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHH
T ss_pred             EEE-eeCCCccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHH
Confidence            999 8999987653221  223456789999999999876645778999999999873

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.96  E-value=5.6e-29  Score=174.77  Aligned_cols=120  Identities=18%  Similarity=0.265  Sum_probs=103.6

Q ss_pred             cceeEEEeccCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeee--cCCCeeEEeccccccc
Q 043346           14 KRENLVFEYVNINLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD--IENKTVKIAADSGMAK   90 (135)
Q Consensus        14 ~~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~--~~~~~~~i~~d~~~~~   90 (135)
                      +..++|||+++++|.+++.. ...+++..+..++.|++.||.|||+++++||||||+||+++  ...+.+++ +|||++.
T Consensus        76 ~~~~lvme~~g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL-~DFGla~  154 (483)
T 3sv0_A           76 DYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYI-IDFGLAK  154 (483)
T ss_dssp             TEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEE-CCCTTCE
T ss_pred             CEEEEEEECCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEE-EeCCcce
Confidence            36789999998899999985 56899999999999999999999999999999999999994  26678999 8999998


Q ss_pred             ccCCCCC-------CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           91 EIDAPFD-------AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        91 ~~~~~~~-------~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      .......       ......+|+.|+|||++.+.. ++.++|+||||+++|+
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~s~~sDvwSlGvil~e  205 (483)
T 3sv0_A          155 KYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIE-QSRRDDLESLGYVLMY  205 (483)
T ss_dssp             ECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCC-CCHHHHHHHHHHHHHH
T ss_pred             eccCCccccccccccccccCCCccccCHHHhcCCC-CChHHHHHHHHHHHHH
Confidence            7654322       223668899999999998876 7889999999999973

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.96  E-value=8.9e-29  Score=169.31  Aligned_cols=126  Identities=25%  Similarity=0.374  Sum_probs=107.1

Q ss_pred             chhhhcccee-cceeEEEeccCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHh--hCCcccCCCCCcceeeec-CC
Q 043346            4 MMKSMSLWVH-KRENLVFEYVNINLHKFIQQY--HPMDSHLIKKFLYCILSGISYCH--ARKIIHRDLTTMNLLADI-EN   77 (135)
Q Consensus         4 ~~~~~~~~~~-~~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh--~~~i~h~dl~~~nil~~~-~~   77 (135)
                      ++++.+.+.. +..++|||+++++|.+++...  ..+++..+..++.|++.|+.|||  +.+++||||||+||++.. ..
T Consensus       118 iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~  197 (382)
T 2vx3_A          118 IVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKR  197 (382)
T ss_dssp             BCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTS
T ss_pred             EEEeeeeeccCCceEEEEecCCCCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCC
Confidence            6666666644 488999999999999999874  46899999999999999999999  579999999999999963 45


Q ss_pred             CeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           78 KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +.+++ +|||++......   .....+|+.|+|||++.+.. ++.++|+|||||++|
T Consensus       198 ~~~kL-~DFG~a~~~~~~---~~~~~~t~~y~aPE~~~~~~-~~~~~DiwSlG~il~  249 (382)
T 2vx3_A          198 SAIKI-VDFGSSCQLGQR---IYQYIQSRFYRSPEVLLGMP-YDLAIDMWSLGCILV  249 (382)
T ss_dssp             CCEEE-CCCTTCEETTCC---CCSSCSCGGGCCHHHHTTCC-CCTHHHHHHHHHHHH
T ss_pred             CcEEE-EeccCceecccc---cccccCCccccChHHHcCCC-CCcHHHHHHHHHHHH
Confidence            67899 899999876433   34567899999999998876 788999999999987

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=4.1e-29  Score=164.99  Aligned_cols=130  Identities=22%  Similarity=0.324  Sum_probs=110.8

Q ss_pred             ccchhhhccceecceeEEEeccC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHKRENLVFEYVN-INLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++++++..+..++|||++. ++|.+++.+ ...+++..+..++.|++.|+.+||+++++|+||+|+||+++ ..+.
T Consensus        70 ~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~-~~~~  148 (287)
T 1u59_A           70 PYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLV-NRHY  148 (287)
T ss_dssp             TTBCCEEEEEESSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE-ETTE
T ss_pred             CCEeEEEEEecCCCcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEc-CCCC
Confidence            47888888887778999999996 499999975 35699999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCC---CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFD---AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~---~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +++ +|||++........   ......+++.|+|||++.+.. .+.++|+||||+++|
T Consensus       149 ~kl-~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~  204 (287)
T 1u59_A          149 AKI-SDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK-FSSRSDVWSYGVTMW  204 (287)
T ss_dssp             EEE-CCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCE-ECHHHHHHHHHHHHH
T ss_pred             EEE-CcccceeeeccCcceeeccccccccccccCHHHhccCC-CCchhhHHHHHHHHH
Confidence            999 89999987654322   223445678999999997665 688999999999987

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.96  E-value=2.7e-29  Score=168.79  Aligned_cols=130  Identities=20%  Similarity=0.369  Sum_probs=108.9

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhc--------------CCCCHHHHHHHHHHHHHHHHHHhhCCcccCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQY--------------HPMDSHLIKKFLYCILSGISYCHARKIIHRD   65 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~--------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d   65 (135)
                      +|++++++++.+. ..++|||+++ ++|.+++...              ..+++..+..++.|++.|+.|||+++++|+|
T Consensus       110 ~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~D  189 (333)
T 2i1m_A          110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRD  189 (333)
T ss_dssp             TTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             CCeeeEEEEEecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCC
Confidence            4788888888554 8899999996 5999999752              3578999999999999999999999999999


Q ss_pred             CCCcceeeecCCCeeEEecccccccccCCCCC--CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           66 LTTMNLLADIENKTVKIAADSGMAKEIDAPFD--AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        66 l~~~nil~~~~~~~~~i~~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      |||+||+++ ..+.+++ +|||++........  ......+++.|+|||++.+.. ++.++|+||||+++|
T Consensus       190 lkp~NIl~~-~~~~~kl-~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~  257 (333)
T 2i1m_A          190 VAARNVLLT-NGHVAKI-GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCV-YTVQSDVWSYGILLW  257 (333)
T ss_dssp             CSGGGCEEE-GGGEEEB-CCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCC-CCHHHHHHHHHHHHH
T ss_pred             cccceEEEC-CCCeEEE-CccccccccccccceeecCCCCCCccccCHHHhccCC-CChHHHHHHHHHHHH
Confidence            999999999 6788999 89999986643322  233455678899999997765 788999999999987

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.96  E-value=1.8e-29  Score=165.95  Aligned_cols=130  Identities=23%  Similarity=0.363  Sum_probs=110.4

Q ss_pred             ccchhhhccceecceeEEEeccC-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHKRENLVFEYVN-INLHKFIQQYH--PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      .|++++++++.++..+++||++. ++|.+++....  .+++..+..++.|++.|+.+||++|++|+||+|+||+++ ..+
T Consensus        68 ~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~-~~~  146 (279)
T 1qpc_A           68 QRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS-DTL  146 (279)
T ss_dssp             TTBCCEEEEECSSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-TTS
T ss_pred             cCcceEEEEEcCCCcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEc-CCC
Confidence            47888888888788999999994 69999997633  789999999999999999999999999999999999999 678


Q ss_pred             eeEEecccccccccCCCCC-CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           79 TVKIAADSGMAKEIDAPFD-AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .+++ +|||.+........ ......+++.|+|||.+.+.. .+.++|+||||+++|
T Consensus       147 ~~kl-~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~  201 (279)
T 1qpc_A          147 SCKI-ADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT-FTIKSDVWSFGILLT  201 (279)
T ss_dssp             CEEE-CCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCE-ECHHHHHHHHHHHHH
T ss_pred             CEEE-CCCcccccccCcccccccCCCCccCccChhhhccCC-CCchhhhHHHHHHHH
Confidence            8999 89999987654322 223445677899999997665 678999999999987

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.96  E-value=5.6e-29  Score=166.79  Aligned_cols=132  Identities=22%  Similarity=0.342  Sum_probs=102.2

Q ss_pred             ccchhhhcccee-------cceeEEEeccCC-CHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcce
Q 043346            2 QEMMKSMSLWVH-------KRENLVFEYVNI-NLHKFIQQY--HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNL   71 (135)
Q Consensus         2 ~~~~~~~~~~~~-------~~~~lv~e~~~~-~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~ni   71 (135)
                      +|++++++++..       ...++|||++++ +|.+++...  ..+++..+..++.|++.|+.|||++|++|+||+|+||
T Consensus        81 ~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NI  160 (326)
T 2x7f_A           81 RNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNV  160 (326)
T ss_dssp             TTBCCEEEEEEECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGE
T ss_pred             CCeeeeeeEEeeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHE
Confidence            467788777753       468999999965 999999863  5789999999999999999999999999999999999


Q ss_pred             eeecCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccC----CCCCCchhHHHHhhhhhhC
Q 043346           72 LADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFG----RTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        72 l~~~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~----~~~~~~~~D~wslg~il~~  135 (135)
                      +++ ..+.+++ +|||++..............+++.|+|||++.+    ...++.++|+||||+++|+
T Consensus       161 l~~-~~~~~kl-~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~  226 (326)
T 2x7f_A          161 LLT-ENAEVKL-VDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIE  226 (326)
T ss_dssp             EEC-TTCCEEE-CCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHH
T ss_pred             EEc-CCCCEEE-eeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHH
Confidence            998 6788999 899999876544444456678999999999963    2336788999999999873

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.96  E-value=2.2e-29  Score=177.41  Aligned_cols=130  Identities=22%  Similarity=0.370  Sum_probs=109.9

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQY--HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN   77 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~   77 (135)
                      .|++++++++.+. ..++|||++. ++|.+++.+.  ..+++..+..++.|++.||+|||+++++||||||+||+++ .+
T Consensus       276 pniv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~-~~  354 (495)
T 1opk_A          276 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVG-EN  354 (495)
T ss_dssp             TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-GG
T ss_pred             CCEeeEEEEEecCCcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEC-CC
Confidence            4788888888654 7899999995 7999999863  4589999999999999999999999999999999999998 67


Q ss_pred             CeeEEecccccccccCCCC-CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           78 KTVKIAADSGMAKEIDAPF-DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +.+++ +|||+++...... .......+++.|+|||++.+.. ++.++|+||||+++|
T Consensus       355 ~~~kl-~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~sDvwSlG~~l~  410 (495)
T 1opk_A          355 HLVKV-ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK-FSIKSDVWAFGVLLW  410 (495)
T ss_dssp             GCEEE-CCTTCEECCTTCCEECCTTCCCCGGGCCHHHHHHCE-ECHHHHHHHHHHHHH
T ss_pred             CcEEE-eecccceeccCCceeecCCCcCCcceeCHhHHhcCC-CCcHHhHHhHHHHHH
Confidence            88999 8999998764432 2223345577899999997765 788999999999987

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=5.8e-29  Score=167.52  Aligned_cols=130  Identities=20%  Similarity=0.377  Sum_probs=103.0

Q ss_pred             ccchhhhccceec-ceeEEEeccCC-CHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNI-NLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~-~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      .|++++++++.+. ..++|||++++ +|.+++... +.+++..+..++.|++.|+.+||+++++|+||||+||+++ .++
T Consensus       106 ~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~-~~~  184 (333)
T 1mqb_A          106 HNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVN-SNL  184 (333)
T ss_dssp             TTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC-TTC
T ss_pred             CCCCcEEEEEecCCCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEEC-CCC
Confidence            4678888887554 78999999964 999999864 6799999999999999999999999999999999999999 678


Q ss_pred             eeEEecccccccccCCCCC---CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           79 TVKIAADSGMAKEIDAPFD---AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~---~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .+++ +|||++........   ......+++.|+|||++.+.. ++.++|+||||+++|
T Consensus       185 ~~kl-~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~  241 (333)
T 1mqb_A          185 VCKV-SDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRK-FTSASDVWSFGIVMW  241 (333)
T ss_dssp             CEEE-CCCCC-----------------CCCGGGSCHHHHHSCC-CCHHHHHHHHHHHHH
T ss_pred             cEEE-CCCCcchhhccccccccccCCCCccccccCchhcccCC-CCchhhhHHHHHHHH
Confidence            8999 89999987654322   122334577899999998766 788999999999987

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.96  E-value=8.7e-29  Score=164.92  Aligned_cols=131  Identities=19%  Similarity=0.344  Sum_probs=100.0

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeec
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQ----YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI   75 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~   75 (135)
                      .|++++++.+.+. ..+++||+++ ++|.+++..    ...+++..+..++.|++.|+.+||+++++|+||+|+||+++ 
T Consensus        92 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~-  170 (310)
T 2wqm_A           92 PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFIT-  170 (310)
T ss_dssp             TTBCCEEEEEEETTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC-
T ss_pred             CCEeeEEEEEEcCCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEc-
Confidence            4678888887554 7889999996 599999874    45689999999999999999999999999999999999999 


Q ss_pred             CCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           76 ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        76 ~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      .++.+++ +|||++..............+++.|+|||.+.+.. ++.++|+||||+++|+
T Consensus       171 ~~~~~kl-~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~~  228 (310)
T 2wqm_A          171 ATGVVKL-GDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENG-YNFKSDIWSLGCLLYE  228 (310)
T ss_dssp             TTSCEEE-CCC------------------CCSSCCHHHHTTCC-CCHHHHHHHHHHHHHH
T ss_pred             CCCCEEE-EeccceeeecCCCccccccCCCeeEeChHHhCCCC-CCchhhHHHHHHHHHH
Confidence            6788999 89999987655444445567899999999998765 7889999999999873

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.96  E-value=2.1e-29  Score=170.99  Aligned_cols=129  Identities=17%  Similarity=0.331  Sum_probs=109.1

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhC-CcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHAR-KIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~i~h~dl~~~nil~~~~~~   78 (135)
                      .|++++++++..+ ..++|||+++ ++|.+++.+.+.+++..+..++.|++.|+.|||++ +++|+||||+||+++ ..+
T Consensus        91 ~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~-~~~  169 (360)
T 3eqc_A           91 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVN-SRG  169 (360)
T ss_dssp             TTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEEC-TTC
T ss_pred             CCEEEEeEEEEECCEEEEEEECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEEC-CCC
Confidence            4788888887555 7899999995 59999999888899999999999999999999996 999999999999999 668


Q ss_pred             eeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           79 TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      .+++ +|||++......  ......+|+.|+|||++.+.. ++.++|+||||+++|.
T Consensus       170 ~~kl-~Dfg~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~il~~  222 (360)
T 3eqc_A          170 EIKL-CDFGVSGQLIDS--MANSFVGTRSYMSPERLQGTH-YSVQSDIWSMGLSLVE  222 (360)
T ss_dssp             CEEE-CCCCCCHHHHHH--C----CCCCTTCCHHHHTTCC-CSHHHHHHHHHHHHHH
T ss_pred             CEEE-EECCCCcccccc--cccCCCCCCCeECHHHHcCCC-CCchhhHHHHHHHHHH
Confidence            8999 899998755322  233457899999999998765 7889999999999873

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.96  E-value=8.6e-30  Score=173.70  Aligned_cols=116  Identities=10%  Similarity=0.122  Sum_probs=95.5

Q ss_pred             ceeEEEeccCCCHHHHHHhc-CCCCHHHH------HHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEecccc
Q 043346           15 RENLVFEYVNINLHKFIQQY-HPMDSHLI------KKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSG   87 (135)
Q Consensus        15 ~~~lv~e~~~~~L~~~~~~~-~~~~~~~~------~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~~   87 (135)
                      +.|+||||++++|.+++... ..++....      ..++.|++.|++|||+++++||||||+||+++ ..+.+++ +|||
T Consensus       162 ~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~-~~~~~kL-~DFG  239 (371)
T 3q60_A          162 NYLLLMPAASVDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIM-PDGRLML-GDVS  239 (371)
T ss_dssp             EEEEEECCCSEEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEC-TTSCEEE-CCGG
T ss_pred             eEEEEecCCCCCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcCCHHHEEEC-CCCCEEE-Eecc
Confidence            47999999999999999863 33444445      67779999999999999999999999999999 6788999 8999


Q ss_pred             cccccCCCCCCCCCCcccccccCcccccCC-CCCCchhHHHHhhhhhhC
Q 043346           88 MAKEIDAPFDAHTTEMVILRYRAPKILFGR-TNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~~D~wslg~il~~  135 (135)
                      ++......   .....+++.|+|||++.+. ..++.++|+||||+++|+
T Consensus       240 ~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~e  285 (371)
T 3q60_A          240 ALWKVGTR---GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYR  285 (371)
T ss_dssp             GEEETTCE---EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHH
T ss_pred             eeeecCCC---ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHH
Confidence            99866432   1134566999999999761 237899999999999973

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.96  E-value=2.7e-29  Score=174.50  Aligned_cols=133  Identities=23%  Similarity=0.324  Sum_probs=100.3

Q ss_pred             ccchhhhccceec-ceeEEEeccCCCHHHHHHhcCCC-------CHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceee
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNINLHKFIQQYHPM-------DSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLA   73 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~~L~~~~~~~~~~-------~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~   73 (135)
                      .||+++++.+.++ ..|+|||+++++|.+++......       ++..+..++.|++.|++|||+++++||||||+||++
T Consensus        69 pnIv~~~~~~~~~~~~~lv~E~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl  148 (434)
T 2rio_A           69 PNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILV  148 (434)
T ss_dssp             TTBCCEEEEEECSSEEEEEECCCSEEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE
T ss_pred             CCcCeEEEEEecCCeEEEEEecCCCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEE
Confidence            4788888888654 78999999999999999874432       222457799999999999999999999999999999


Q ss_pred             ecC------------CCeeEEecccccccccCCCCC----CCCCCcccccccCcccccC------CCCCCchhHHHHhhh
Q 043346           74 DIE------------NKTVKIAADSGMAKEIDAPFD----AHTTEMVILRYRAPKILFG------RTNCFAAIDMWAVLY  131 (135)
Q Consensus        74 ~~~------------~~~~~i~~d~~~~~~~~~~~~----~~~~~~~~~~~~ape~~~~------~~~~~~~~D~wslg~  131 (135)
                      +..            ...+++ +|||++........    ......||+.|+|||++.+      ...++.++|+|||||
T Consensus       149 ~~~~~~~~~~~~~~~~~~~kL-~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~  227 (434)
T 2rio_A          149 STSSRFTADQQTGAENLRILI-SDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGC  227 (434)
T ss_dssp             ECCHHHHSCCTTCCCSCEEEE-CCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHH
T ss_pred             ecCcccccccccCCCceEEEE-cccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHH
Confidence            732            347899 89999987654322    1234578999999999965      234788999999999


Q ss_pred             hhhC
Q 043346          132 LLRW  135 (135)
Q Consensus       132 il~~  135 (135)
                      ++|+
T Consensus       228 il~e  231 (434)
T 2rio_A          228 VFYY  231 (434)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9873

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.96  E-value=5.3e-29  Score=180.28  Aligned_cols=130  Identities=18%  Similarity=0.362  Sum_probs=108.4

Q ss_pred             ccchhhhccceecceeEEEeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHKRENLVFEYVN-INLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++++++.++..|+|||+++ ++|.+++... ..+++..+..++.|++.|+.|||+++++||||||+||+++ .++.
T Consensus       451 pnIv~l~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~-~~~~  529 (656)
T 2j0j_A          451 PHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS-SNDC  529 (656)
T ss_dssp             TTBCCEEEEECSSSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE-ETTE
T ss_pred             CCCCeEEEEEecCceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEe-CCCC
Confidence            47889999888888999999995 6999999864 3689999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCC-CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFD-AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +++ +|||++........ ......+++.|+|||++.+.. ++.++|+||+|+++|
T Consensus       530 vkL-~DFG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~-~~~~~DiwSlG~il~  583 (656)
T 2j0j_A          530 VKL-GDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR-FTSASDVWMFGVCMW  583 (656)
T ss_dssp             EEE-CCCCCCCSCCC----------CCGGGCCHHHHHHCC-CCHHHHHHHHHHHHH
T ss_pred             EEE-EecCCCeecCCCcceeccCCCCCcceeCHHHhcCCC-CCchhhHHHHHHHHH
Confidence            999 89999987644322 223345678899999997665 788999999999987

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.96  E-value=4.7e-29  Score=167.39  Aligned_cols=131  Identities=26%  Similarity=0.357  Sum_probs=109.6

Q ss_pred             ccchhhhccce---ecceeEEEecc-CCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecC
Q 043346            2 QEMMKSMSLWV---HKRENLVFEYV-NINLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE   76 (135)
Q Consensus         2 ~~~~~~~~~~~---~~~~~lv~e~~-~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~   76 (135)
                      .|++++++++.   +...++|||++ +++|.+++.. ...+++..+..++.|++.|+.+||+++++|+||||+||+++ .
T Consensus        84 ~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~-~  162 (327)
T 3lxl_A           84 DFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVE-S  162 (327)
T ss_dssp             TTBCCEEEEEECSSSCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE-E
T ss_pred             CceeEEEEEEecCCCceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEEC-C
Confidence            46777777663   33688999999 5699999987 45699999999999999999999999999999999999999 6


Q ss_pred             CCeeEEecccccccccCCCCC---CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           77 NKTVKIAADSGMAKEIDAPFD---AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        77 ~~~~~i~~d~~~~~~~~~~~~---~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      .+.+++ +|||++........   ......+++.|+|||++.+.. ++.++|+||||+++|+
T Consensus       163 ~~~~kl-~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~  222 (327)
T 3lxl_A          163 EAHVKI-ADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNI-FSRQSDVWSFGVVLYE  222 (327)
T ss_dssp             TTEEEE-CCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCE-EEHHHHHHHHHHHHHH
T ss_pred             CCCEEE-cccccceecccCCccceeeccCCccccccCHHHhccCC-CChHHhHHHHHHHHHH
Confidence            788999 89999987654322   234456788899999997766 6889999999999873

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.96  E-value=3.4e-29  Score=165.22  Aligned_cols=131  Identities=23%  Similarity=0.356  Sum_probs=110.0

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQY--HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN   77 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~   77 (135)
                      .|++++++++.++ ..++|||+++ ++|.+++.+.  ..+++..+..++.|++.|+.+||+++++|+||+|+||+++ ..
T Consensus        69 ~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~-~~  147 (288)
T 3kfa_A           69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG-EN  147 (288)
T ss_dssp             TTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEEC-GG
T ss_pred             CCEeeEEEEEccCCCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEc-CC
Confidence            4678888887554 7899999996 5999999873  4589999999999999999999999999999999999998 66


Q ss_pred             CeeEEecccccccccCCCCC-CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           78 KTVKIAADSGMAKEIDAPFD-AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +.+++ +|||.+........ ......+++.|+|||.+.+.. ++.++|+||+|+++|+
T Consensus       148 ~~~~l-~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~  204 (288)
T 3kfa_A          148 HLVKV-ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK-FSIKSDVWAFGVLLWE  204 (288)
T ss_dssp             GCEEE-CCCCGGGTSCSSSSEEETTEEECGGGCCHHHHHHCC-CCHHHHHHHHHHHHHH
T ss_pred             CCEEE-ccCccceeccCCccccccCCccccCcCChhhhccCC-CCchhhHHHHHHHHHH
Confidence            78999 89999987654432 233445677899999997766 7889999999999873

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.96  E-value=7.9e-29  Score=166.36  Aligned_cols=131  Identities=27%  Similarity=0.349  Sum_probs=93.1

Q ss_pred             ccchhhhccce---------ecceeEEEeccCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHhhCC--cccCCCC
Q 043346            2 QEMMKSMSLWV---------HKRENLVFEYVNINLHKFIQQ---YHPMDSHLIKKFLYCILSGISYCHARK--IIHRDLT   67 (135)
Q Consensus         2 ~~~~~~~~~~~---------~~~~~lv~e~~~~~L~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lh~~~--i~h~dl~   67 (135)
                      .|++++++.+.         +...+++||+++++|.+++..   .+.+++..+..++.|++.|+.|||+++  ++|+|||
T Consensus        86 ~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dik  165 (337)
T 3ll6_A           86 PNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLK  165 (337)
T ss_dssp             TTBCCEEEEEEECTTTSTTSSEEEEEEEECCSEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCC
T ss_pred             CChhhccccccccccccccCCceEEEEEEecCCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCC
Confidence            36677766652         225789999999999999875   457999999999999999999999999  9999999


Q ss_pred             CcceeeecCCCeeEEecccccccccCCCCC------------CCCCCcccccccCccccc--CCCCCCchhHHHHhhhhh
Q 043346           68 TMNLLADIENKTVKIAADSGMAKEIDAPFD------------AHTTEMVILRYRAPKILF--GRTNCFAAIDMWAVLYLL  133 (135)
Q Consensus        68 ~~nil~~~~~~~~~i~~d~~~~~~~~~~~~------------~~~~~~~~~~~~ape~~~--~~~~~~~~~D~wslg~il  133 (135)
                      |+||+++ ..+.+++ +|||++........            ......+|+.|+|||++.  ....++.++|+||||+++
T Consensus       166 p~NIl~~-~~~~~kl-~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il  243 (337)
T 3ll6_A          166 VENLLLS-NQGTIKL-CDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCIL  243 (337)
T ss_dssp             GGGCEEC-TTSCEEB-CCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHH
T ss_pred             cccEEEC-CCCCEEE-ecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHH
Confidence            9999999 6788999 89999987654321            112456889999999983  223367899999999998


Q ss_pred             h
Q 043346          134 R  134 (135)
Q Consensus       134 ~  134 (135)
                      |
T Consensus       244 ~  244 (337)
T 3ll6_A          244 Y  244 (337)
T ss_dssp             H
T ss_pred             H
Confidence            7

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.96  E-value=4.8e-29  Score=166.84  Aligned_cols=131  Identities=21%  Similarity=0.342  Sum_probs=108.4

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCc
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQY----------HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTM   69 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~----------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~   69 (135)
                      .|++++++++.++ ..++|||++. ++|.+++...          ..++...+..++.|++.|+.+||++|++|+||||+
T Consensus        88 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~  167 (322)
T 1p4o_A           88 HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAAR  167 (322)
T ss_dssp             TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGG
T ss_pred             CCEeeeEEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccc
Confidence            4678888887554 7899999995 6999999752          35689999999999999999999999999999999


Q ss_pred             ceeeecCCCeeEEecccccccccCCCC--CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           70 NLLADIENKTVKIAADSGMAKEIDAPF--DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        70 nil~~~~~~~~~i~~d~~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ||+++ .++.+++ +|||++.......  .......+++.|+|||++.+.. ++.++|+||||+++|+
T Consensus       168 NIli~-~~~~~kl-~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~e  232 (322)
T 1p4o_A          168 NCMVA-EDFTVKI-GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGV-FTTYSDVWSFGVVLWE  232 (322)
T ss_dssp             GEEEC-TTCCEEE-CCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCC-CCHHHHHHHHHHHHHH
T ss_pred             eEEEc-CCCeEEE-CcCccccccccccccccccCCCCCCCccChhhhccCC-CCchhhHHHHHHHHHH
Confidence            99999 6788999 8999997654322  1223445678899999997765 7889999999999873

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.96  E-value=1e-28  Score=164.73  Aligned_cols=131  Identities=20%  Similarity=0.337  Sum_probs=101.4

Q ss_pred             ccchhhhccceec------ceeEEEeccC-CCHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCC
Q 043346            2 QEMMKSMSLWVHK------RENLVFEYVN-INLHKFIQQ------YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTT   68 (135)
Q Consensus         2 ~~~~~~~~~~~~~------~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~   68 (135)
                      .|++++++++.+.      ..+++||++. ++|.+++..      ...+++..+..++.|++.|+.|||+++++|+||||
T Consensus        96 ~~iv~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp  175 (313)
T 3brb_A           96 PNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAA  175 (313)
T ss_dssp             TTBCCCCEEEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSG
T ss_pred             CCeeeeeEEEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCc
Confidence            4678888777543      3589999995 699999943      35689999999999999999999999999999999


Q ss_pred             cceeeecCCCeeEEecccccccccCCCC--CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           69 MNLLADIENKTVKIAADSGMAKEIDAPF--DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        69 ~nil~~~~~~~~~i~~d~~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +||+++ ..+.+++ +|||++.......  .......+++.|+|||.+.+.. ++.++|+||||+++|+
T Consensus       176 ~NIli~-~~~~~kl-~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~e  241 (313)
T 3brb_A          176 RNCMLR-DDMTVCV-ADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRV-YTSKSDVWAFGVTMWE  241 (313)
T ss_dssp             GGEEEC-TTSCEEE-CSCSCC----------------CCGGGSCHHHHHSSC-CCHHHHHHHHHHHHHH
T ss_pred             ceEEEc-CCCcEEE-eecCcceecccccccCcccccCCCccccCchhhcCCC-ccchhhhHHHHHHHHH
Confidence            999999 6688999 8999998664332  2233445678899999998766 7889999999999873

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.96  E-value=7.5e-29  Score=169.13  Aligned_cols=126  Identities=26%  Similarity=0.511  Sum_probs=103.5

Q ss_pred             ccchhhhccceec-c------eeEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeee
Q 043346            2 QEMMKSMSLWVHK-R------ENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD   74 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~------~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~   74 (135)
                      +|++++++++... .      .++|||+++++|.+.+..  .+++..+..++.|++.|++|||++|++|+||||+||+++
T Consensus       101 ~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~  178 (371)
T 4exu_A          101 ENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGM--EFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVN  178 (371)
T ss_dssp             TTBCCCSEEECSCSSSTTCCCCEEEEECCCEEHHHHTTS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC
T ss_pred             CCchhhhhheeccCCcccceeEEEEEccccccHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEEC
Confidence            4778888877544 2      399999999999888744  599999999999999999999999999999999999999


Q ss_pred             cCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           75 IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        75 ~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                       ..+.+++ +|||++......   .....+|+.|+|||++.+...++.++|+||||+++|
T Consensus       179 -~~~~~kL-~Dfg~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~  233 (371)
T 4exu_A          179 -EDCELKI-LDFGLARHADAE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMA  233 (371)
T ss_dssp             -TTCCEEE-CSTTCC-----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHH
T ss_pred             -CCCCEEE-EecCcccccccC---cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHH
Confidence             6788999 899999765433   344577999999999987555888999999999987

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.96  E-value=4e-29  Score=166.71  Aligned_cols=130  Identities=24%  Similarity=0.419  Sum_probs=108.9

Q ss_pred             ccchhhhccceec--ceeEEEeccC-CCHHHHHHhcCC----------------CCHHHHHHHHHHHHHHHHHHhhCCcc
Q 043346            2 QEMMKSMSLWVHK--RENLVFEYVN-INLHKFIQQYHP----------------MDSHLIKKFLYCILSGISYCHARKII   62 (135)
Q Consensus         2 ~~~~~~~~~~~~~--~~~lv~e~~~-~~L~~~~~~~~~----------------~~~~~~~~~~~~i~~~l~~lh~~~i~   62 (135)
                      .|++++++++...  ..+++||+++ ++|.+++.....                +++..+..++.|++.|+.|||+++++
T Consensus        91 p~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~  170 (316)
T 2xir_A           91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI  170 (316)
T ss_dssp             TTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCeeeEEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence            4788888877543  5899999996 599999987443                78999999999999999999999999


Q ss_pred             cCCCCCcceeeecCCCeeEEecccccccccCCCCC--CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           63 HRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFD--AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        63 h~dl~~~nil~~~~~~~~~i~~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      |+||||+||+++ ..+.+++ +|||++........  ......+++.|+|||++.+.. ++.++|+||||+++|
T Consensus       171 H~dikp~Nil~~-~~~~~kl-~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~-~~~~~Di~slG~il~  241 (316)
T 2xir_A          171 HRDLAARNILLS-EKNVVKI-CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLW  241 (316)
T ss_dssp             CSCCSGGGEEEC-GGGCEEE-CCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCC-CCHHHHHHHHHHHHH
T ss_pred             cccCccceEEEC-CCCCEEE-CCCccccccccCccceeccCCCcceeecCchhhcccc-ccchhHHHHHHHHHH
Confidence            999999999998 6688999 89999986644322  233456788999999997766 788999999999987

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.96  E-value=6.1e-29  Score=164.88  Aligned_cols=132  Identities=22%  Similarity=0.272  Sum_probs=105.6

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHh--------cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcce
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQ--------YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNL   71 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~--------~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~ni   71 (135)
                      .|++++++.+... ..++|||++. ++|.+++..        .+.+++..+..++.|++.|+.+||+++++|+||+|+||
T Consensus        73 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Ni  152 (303)
T 2vwi_A           73 PNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNI  152 (303)
T ss_dssp             TTBCCEEEEEESSSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGE
T ss_pred             CCEeeEEEEEeecCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhE
Confidence            4778888877544 8899999995 699999874        34689999999999999999999999999999999999


Q ss_pred             eeecCCCeeEEecccccccccCCCC-----CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           72 LADIENKTVKIAADSGMAKEIDAPF-----DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        72 l~~~~~~~~~i~~d~~~~~~~~~~~-----~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ ..+.+++ +|||++.......     .......+++.|+|||++.+....+.++|+||||+++|+
T Consensus       153 l~~-~~~~~kl-~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~  219 (303)
T 2vwi_A          153 LLG-EDGSVQI-ADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIE  219 (303)
T ss_dssp             EEC-TTCCEEE-CCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHH
T ss_pred             EEc-CCCCEEE-EeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHH
Confidence            999 6688999 8999987654321     123445789999999999764447889999999999873

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.96  E-value=8.2e-29  Score=162.16  Aligned_cols=129  Identities=23%  Similarity=0.370  Sum_probs=100.7

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCCcceeeec-
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARK---IIHRDLTTMNLLADI-   75 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~-   75 (135)
                      +|++++++++.++ ..++|||+++ ++|.+++.. +.+++..+..++.|++.|+.+||+++   ++|+||||+||+++. 
T Consensus        66 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~  144 (271)
T 3dtc_A           66 PNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSG-KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQK  144 (271)
T ss_dssp             TTBCCEEEEECCC--CEEEEECCTTEEHHHHHTS-SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSC
T ss_pred             CCEeeEEEEEecCCceEEEEEcCCCCCHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecc
Confidence            4678888887544 7899999995 599988865 68999999999999999999999999   889999999999984 


Q ss_pred             ------CCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           76 ------ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        76 ------~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                            ..+.+++ +|||.+.......  .....+++.|+|||.+.+.. ++.++|+||+|+++|+
T Consensus       145 ~~~~~~~~~~~kl-~Dfg~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~~  206 (271)
T 3dtc_A          145 VENGDLSNKILKI-TDFGLAREWHRTT--KMSAAGAYAWMAPEVIRASM-FSKGSDVWSYGVLLWE  206 (271)
T ss_dssp             CSSSCCSSCCEEE-CCCCC---------------CCGGGSCHHHHHHCC-CSHHHHHHHHHHHHHH
T ss_pred             cccccccCcceEE-ccCCccccccccc--ccCCCCccceeCHHHhccCC-CCchhhHHHHHHHHHH
Confidence                  2567899 8999997654432  23457899999999997765 7889999999999873

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.96  E-value=2e-28  Score=163.22  Aligned_cols=128  Identities=23%  Similarity=0.289  Sum_probs=100.7

Q ss_pred             ccchhhhccceecceeEEEeccC-CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCCcceeee
Q 043346            2 QEMMKSMSLWVHKRENLVFEYVN-INLHKFIQQYH---PMDSHLIKKFLYCILSGISYCHA---RKIIHRDLTTMNLLAD   74 (135)
Q Consensus         2 ~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lh~---~~i~h~dl~~~nil~~   74 (135)
                      +|++++++.+.+ ..++||||+. ++|.+++....   .++...+..++.|++.|+.|||+   ++++|+||||+||+++
T Consensus        61 p~iv~~~~~~~~-~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~  139 (307)
T 2eva_A           61 PNIVKLYGACLN-PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLV  139 (307)
T ss_dssp             TTBCCEEEBCTT-TTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEE
T ss_pred             CCcCeEEEEEcC-CcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEe
Confidence            477888877764 5899999995 69999998754   47889999999999999999999   8999999999999998


Q ss_pred             cCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           75 IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        75 ~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      .++..+++ +|||++......   .....+|+.|+|||++.+.. ++.++|+||||+++|.
T Consensus       140 ~~~~~~kl-~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~il~e  195 (307)
T 2eva_A          140 AGGTVLKI-CDFGTACDIQTH---MTNNKGSAAWMAPEVFEGSN-YSEKCDVFSWGIILWE  195 (307)
T ss_dssp             TTTTEEEE-CCCCC---------------CCTTSSCHHHHTCCC-CCTHHHHHHHHHHHHH
T ss_pred             CCCCEEEE-cccccccccccc---cccCCCCCceEChhhhCCCC-CCcHHHHHHHHHHHHH
Confidence            55445799 899998765432   23346899999999998765 7889999999999873

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.96  E-value=3e-29  Score=178.08  Aligned_cols=130  Identities=23%  Similarity=0.343  Sum_probs=110.2

Q ss_pred             ccchhhhccceecceeEEEeccC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHKRENLVFEYVN-INLHKFIQQ--YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      .|++++++++.++..++|||++. ++|.+++..  ...++...+..++.|++.||.|||+++++||||||+||+++ .++
T Consensus       322 pniv~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~-~~~  400 (535)
T 2h8h_A          322 EKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG-ENL  400 (535)
T ss_dssp             TTBCCEEEEECSSSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC-GGG
T ss_pred             CCEeeEEEEEeeccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEc-CCC
Confidence            47888888888788999999995 599999975  35689999999999999999999999999999999999998 668


Q ss_pred             eeEEecccccccccCCCC-CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           79 TVKIAADSGMAKEIDAPF-DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .+++ +|||+++...... .......++..|+|||++.+.. ++.++|+||||+++|
T Consensus       401 ~~kl-~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~sDvwSlGv~l~  455 (535)
T 2h8h_A          401 VCKV-ADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKSDVWSFGILLT  455 (535)
T ss_dssp             CEEE-CCTTSTTTCCCHHHHTTCSTTSCGGGSCHHHHHHCC-CCHHHHHHHHHHHHH
T ss_pred             cEEE-cccccceecCCCceecccCCcCcccccCHHHhccCC-CCchhhHHHHHHHHH
Confidence            8999 8999998664321 1223345677899999997765 788999999999987

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.96  E-value=1.4e-28  Score=164.12  Aligned_cols=131  Identities=18%  Similarity=0.363  Sum_probs=104.5

Q ss_pred             ccchhhhccceec-ceeEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      .|++++++++..+ ..+++||+.+++|.+++.+.+.+++..+..++.|++.|+.|||+++++|+||+|+||+++ + +.+
T Consensus        88 ~~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~-~-~~~  165 (313)
T 3cek_A           88 DKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-D-GML  165 (313)
T ss_dssp             TTBCCEEEEEECSSEEEEEECCCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-T-TEE
T ss_pred             CceEEEEEEeecCCEEEEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE-C-CeE
Confidence            4678888877544 788999966789999999888899999999999999999999999999999999999997 3 789


Q ss_pred             EEecccccccccCCCCC--CCCCCcccccccCcccccCC----------CCCCchhHHHHhhhhhhC
Q 043346           81 KIAADSGMAKEIDAPFD--AHTTEMVILRYRAPKILFGR----------TNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~----------~~~~~~~D~wslg~il~~  135 (135)
                      ++ +|||++........  ......+++.|+|||++.+.          ...+.++|+||||+++|+
T Consensus       166 kL-~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~e  231 (313)
T 3cek_A          166 KL-IDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYY  231 (313)
T ss_dssp             EE-CCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHH
T ss_pred             EE-eeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHH
Confidence            99 89999987644322  22345789999999999652          236789999999999873

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.96  E-value=1.3e-28  Score=162.79  Aligned_cols=133  Identities=22%  Similarity=0.306  Sum_probs=108.9

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQY---HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE   76 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~   76 (135)
                      .|++++++++.++ ..++|||++. ++|.+++...   ..+++..+..++.|++.|+.+||+++++|+||+|+||+++..
T Consensus        79 ~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~  158 (295)
T 2clq_A           79 KNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTY  158 (295)
T ss_dssp             TTBCCEEEEEEETTEEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETT
T ss_pred             CCEeeEeeEEEeCCcEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECC
Confidence            4788888888655 7889999995 6999999864   246788999999999999999999999999999999999955


Q ss_pred             CCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCC-CCCchhHHHHhhhhhhC
Q 043346           77 NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRT-NCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        77 ~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~-~~~~~~D~wslg~il~~  135 (135)
                      .+.+++ +|||.+..............+++.|+|||++.+.. .++.++|+||||+++|+
T Consensus       159 ~~~~kl-~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~  217 (295)
T 2clq_A          159 SGVLKI-SDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIE  217 (295)
T ss_dssp             TCCEEE-CCTTTCEESCC-----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHH
T ss_pred             CCCEEE-eecccccccCCCCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHH
Confidence            788999 89999987655434445667899999999996542 26789999999999873

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.96  E-value=8.8e-29  Score=161.62  Aligned_cols=131  Identities=18%  Similarity=0.309  Sum_probs=109.3

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      +|++++++++.++ ..+++||+++ ++|.+++... +.+++..+..++.|++.|+.+||+++++|+||+|+||+++ ..+
T Consensus        63 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~-~~~  141 (267)
T 3t9t_A           63 PKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG-ENQ  141 (267)
T ss_dssp             TTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEEC-GGG
T ss_pred             CCEeeEEEEEccCCCeEEEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEC-CCC
Confidence            4778888887554 7899999995 6999999874 5689999999999999999999999999999999999998 668


Q ss_pred             eeEEecccccccccCCCC-CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           79 TVKIAADSGMAKEIDAPF-DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      .+++ +|||++....... .......+++.|+|||++.+.. .+.++|+||+|+++|+
T Consensus       142 ~~kl-~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~  197 (267)
T 3t9t_A          142 VIKV-SDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSR-YSSKSDVWSFGVLMWE  197 (267)
T ss_dssp             CEEE-CCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCC-CCHHHHHHHHHHHHHH
T ss_pred             CEEE-cccccccccccccccccccccccccccChhhhcCCC-ccchhchhhhHHHHHH
Confidence            8999 8999998664321 1223445678899999997665 6889999999999873

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.96  E-value=1.3e-28  Score=165.21  Aligned_cols=131  Identities=19%  Similarity=0.299  Sum_probs=92.8

Q ss_pred             ccchhhhccceec-ceeEEEeccCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHhhC-CcccCCCCCcceeee
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNINLHKFIQQ-----YHPMDSHLIKKFLYCILSGISYCHAR-KIIHRDLTTMNLLAD   74 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~~L~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~lh~~-~i~h~dl~~~nil~~   74 (135)
                      .|++++++++..+ ..++|||+++++|.+++..     ...+++..+..++.|++.|+.+||++ +++|+||+|+||+++
T Consensus        81 ~niv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~  160 (327)
T 3aln_A           81 PYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLD  160 (327)
T ss_dssp             TTBCCEEEEEECSSEEEEEECCCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEE
T ss_pred             CcEeeeeeEEEeCCceEEEEeecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEc
Confidence            4788888887554 7889999999898888863     56789999999999999999999999 999999999999999


Q ss_pred             cCCCeeEEecccccccccCCCCCCCCCCcccccccCccccc---CCCCCCchhHHHHhhhhhhC
Q 043346           75 IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILF---GRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        75 ~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~---~~~~~~~~~D~wslg~il~~  135 (135)
                       ..+.+++ +|||++....... ......+++.|+|||++.   ....++.++|+||||+++|+
T Consensus       161 -~~~~~kl-~Dfg~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~  221 (327)
T 3aln_A          161 -RSGNIKL-CDFGISGQLVDSI-AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYE  221 (327)
T ss_dssp             -TTTEEEE-CCCSSSCC-------------------------------CCSHHHHHHHHHHHHH
T ss_pred             -CCCCEEE-ccCCCceeccccc-ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHH
Confidence             7789999 8999998765432 233346899999999983   22337889999999999873

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.96  E-value=3.2e-28  Score=161.94  Aligned_cols=130  Identities=25%  Similarity=0.326  Sum_probs=108.9

Q ss_pred             ccchhhhccceec-ceeEEEecc-CCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYV-NINLHKFIQQ---YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE   76 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~-~~~L~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~   76 (135)
                      .|++++++++.+. ..+++||++ +++|.+++..   ...+++..+..++.|++.|+.+||+++++|+||+|+||+++ .
T Consensus        90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~-~  168 (307)
T 2nru_A           90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLD-E  168 (307)
T ss_dssp             TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC-T
T ss_pred             CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEc-C
Confidence            4678888887544 789999999 5699999974   34689999999999999999999999999999999999999 6


Q ss_pred             CCeeEEecccccccccCCCCC--CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           77 NKTVKIAADSGMAKEIDAPFD--AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        77 ~~~~~i~~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      .+.+++ +|||++........  ......+++.|+|||.+.+.  .+.++|+||||+++|+
T Consensus       169 ~~~~kl-~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~--~~~~~Dv~slG~il~~  226 (307)
T 2nru_A          169 AFTAKI-SDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRGE--ITPKSDIYSFGVVLLE  226 (307)
T ss_dssp             TCCEEE-CCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTTE--ECTHHHHHHHHHHHHH
T ss_pred             CCcEEE-eecccccccccccccccccccCCCcCcCChHHhcCC--CCccchhHHHHHHHHH
Confidence            788999 89999886644322  23345789999999998764  5789999999999873

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.96  E-value=8.5e-29  Score=165.73  Aligned_cols=130  Identities=28%  Similarity=0.406  Sum_probs=108.6

Q ss_pred             ccchhhhcccee---cceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC
Q 043346            2 QEMMKSMSLWVH---KRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN   77 (135)
Q Consensus         2 ~~~~~~~~~~~~---~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~   77 (135)
                      .|++++++++.+   ...++|||+++ ++|.+++.. ..+++..+..++.|++.|+.+||+++++|+||||+||+++ ..
T Consensus        93 ~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~-~~  170 (318)
T 3lxp_A           93 EHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPR-HSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLD-ND  170 (318)
T ss_dssp             TTBCCEEEEEEETTTTEEEEEECCCTTCBHHHHGGG-SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-TT
T ss_pred             cchhhEEEEEecCCCceEEEEEecccCCcHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEc-CC
Confidence            477888888765   36789999995 599999987 4599999999999999999999999999999999999999 67


Q ss_pred             CeeEEecccccccccCCCCC---CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           78 KTVKIAADSGMAKEIDAPFD---AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~---~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +.+++ +|||++........   ......+++.|+|||++.+.. ++.++|+||||+++|+
T Consensus       171 ~~~kl-~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~  229 (318)
T 3lxp_A          171 RLVKI-GDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYK-FYYASDVWSFGVTLYE  229 (318)
T ss_dssp             CCEEE-CCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCE-EEHHHHHHHHHHHHHH
T ss_pred             CCEEE-CCccccccccccccccccccCCCCCceeeChHHhcCCC-CCcHHHHHHHHHHHHH
Confidence            88999 89999987654422   233456788899999997766 6789999999999873

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.96  E-value=2.4e-29  Score=172.90  Aligned_cols=131  Identities=16%  Similarity=0.291  Sum_probs=107.0

Q ss_pred             ccchhhhccceec---ceeEEEeccC-CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceee-
Q 043346            2 QEMMKSMSLWVHK---RENLVFEYVN-INLHKFIQQYH---PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLA-   73 (135)
Q Consensus         2 ~~~~~~~~~~~~~---~~~lv~e~~~-~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~-   73 (135)
                      .|++++++++...   ..++|||+++ ++|.+++....   .+++..+..++.|++.|++|||+++++||||||+||++ 
T Consensus        67 pnIv~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~  146 (396)
T 4eut_A           67 KNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRV  146 (396)
T ss_dssp             TTBCCEEEEEECTTTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEE
T ss_pred             CCCCeEEEeeccCCCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEe
Confidence            4778888777533   5789999995 59999997633   38999999999999999999999999999999999998 


Q ss_pred             ---ecCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCC-------CCCCchhHHHHhhhhhhC
Q 043346           74 ---DIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGR-------TNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        74 ---~~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-------~~~~~~~D~wslg~il~~  135 (135)
                         + ..+.+++ +|||++...... .......+|+.|+|||++.+.       ..++.++|+||||+++|.
T Consensus       147 ~~~~-~~~~~kL-~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~e  215 (396)
T 4eut_A          147 IGED-GQSVYKL-TDFGAARELEDD-EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYH  215 (396)
T ss_dssp             ECTT-SCEEEEE-CCGGGCEECCCG-GGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHH
T ss_pred             ecCC-CceeEEE-ecCCCceEccCC-CccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHH
Confidence               4 5567889 899999876544 233456789999999998641       225678999999999973

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.96  E-value=7.9e-29  Score=163.60  Aligned_cols=131  Identities=22%  Similarity=0.301  Sum_probs=108.8

Q ss_pred             ccchhhhccceecceeEEEeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHKRENLVFEYVN-INLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++++++..+..++++|++. ++|.+++... +.+++..+..++.|++.|+.+||+++++|+||+|+||+++ ..+.
T Consensus        81 ~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~-~~~~  159 (291)
T 1u46_A           81 RNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLA-TRDL  159 (291)
T ss_dssp             TTBCCEEEEECSSSCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEE-ETTE
T ss_pred             CCcccEEEEEccCCceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEc-CCCC
Confidence            47888888887778999999995 6999999863 5789999999999999999999999999999999999999 6688


Q ss_pred             eEEecccccccccCCCCC---CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFD---AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~---~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||++........   ......+++.|+|||++.+.. ++.++|+||||+++|+
T Consensus       160 ~kl-~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~  216 (291)
T 1u46_A          160 VKI-GDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT-FSHASDTWMFGVTLWE  216 (291)
T ss_dssp             EEE-CCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCE-EEHHHHHHHHHHHHHH
T ss_pred             EEE-ccccccccccccccchhhhccCCCCceeeCchhhcCCC-CCchhhHHHHHHHHHH
Confidence            999 89999987654322   223345677899999997765 6789999999999873

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.96  E-value=3.9e-29  Score=168.65  Aligned_cols=132  Identities=23%  Similarity=0.301  Sum_probs=103.1

Q ss_pred             ccchhhhccceec-ceeEEEecc-CCCHHHHHHh----------------------------------------cCCCCH
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYV-NINLHKFIQQ----------------------------------------YHPMDS   39 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~-~~~L~~~~~~----------------------------------------~~~~~~   39 (135)
                      +|++++++++.+. ..++|||++ +++|.+++..                                        ...+++
T Consensus        88 pniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (345)
T 3hko_A           88 PNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQRE  167 (345)
T ss_dssp             TTBCCEEEEEECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHH
T ss_pred             CCcceeehhhccCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccH
Confidence            4788888888655 789999999 5699998852                                        012357


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC-CeeEEecccccccccCCCCC----CCCCCcccccccCcccc
Q 043346           40 HLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN-KTVKIAADSGMAKEIDAPFD----AHTTEMVILRYRAPKIL  114 (135)
Q Consensus        40 ~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~-~~~~i~~d~~~~~~~~~~~~----~~~~~~~~~~~~ape~~  114 (135)
                      ..+..++.|++.|+.|||+++++|+||||+||+++.+. ..+++ +|||++........    ......+|+.|+|||++
T Consensus       168 ~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl-~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  246 (345)
T 3hko_A          168 KLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKL-VDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVL  246 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSCCEEE-CCCTTCEEGGGTTCC--------CCCGGGCCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEecCCCceEEE-eeccccccccccCccccccccccCCCccccCchhh
Confidence            78889999999999999999999999999999998332 27899 89999986533211    23456789999999999


Q ss_pred             cCC-CCCCchhHHHHhhhhhh
Q 043346          115 FGR-TNCFAAIDMWAVLYLLR  134 (135)
Q Consensus       115 ~~~-~~~~~~~D~wslg~il~  134 (135)
                      .+. ..++.++|+||||+++|
T Consensus       247 ~~~~~~~~~~~DiwslG~il~  267 (345)
T 3hko_A          247 NTTNESYGPKCDAWSAGVLLH  267 (345)
T ss_dssp             TCSSSCCCTHHHHHHHHHHHH
T ss_pred             ccCCCCCCcHHHHHHHHHHHH
Confidence            653 34788999999999987

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.96  E-value=3.1e-29  Score=168.89  Aligned_cols=122  Identities=13%  Similarity=0.092  Sum_probs=100.0

Q ss_pred             ccchhhhccce--------------ecceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHh-hCCcccCC
Q 043346            2 QEMMKSMSLWV--------------HKRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCH-ARKIIHRD   65 (135)
Q Consensus         2 ~~~~~~~~~~~--------------~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh-~~~i~h~d   65 (135)
                      .|++++++.+.              ++..|+||||+. |++.+.+.+ +.+++..+..++.|++.||+||| +++++|||
T Consensus       109 p~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~~ivHrD  187 (336)
T 2vuw_A          109 PLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-KLSSLATAKSILHQLTASLAVAEASLRFEHRD  187 (336)
T ss_dssp             HHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-TCCCHHHHHHHHHHHHHHHHHHHHHHCCBCSC
T ss_pred             HHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHhCCEeECC
Confidence            45667776664              458999999994 555555544 57899999999999999999999 99999999


Q ss_pred             CCCcceeeecCC-------------------CeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHH
Q 043346           66 LTTMNLLADIEN-------------------KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDM  126 (135)
Q Consensus        66 l~~~nil~~~~~-------------------~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~  126 (135)
                      |||+||+++..+                   ..+|+ +|||+++.....     ...||+.|+|||++.+..  +.++|+
T Consensus       188 lKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL-~DFG~a~~~~~~-----~~~gt~~y~aPE~~~g~~--~~~~Di  259 (336)
T 2vuw_A          188 LHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSI-IDYTLSRLERDG-----IVVFCDVSMDEDLFTGDG--DYQFDI  259 (336)
T ss_dssp             CCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEE-CCCTTCBEEETT-----EEECCCCTTCSGGGCCCS--SHHHHH
T ss_pred             CCHHHEEEeccCCcceeeeccCccccccCCCceEEE-eeccccEecCCC-----cEEEeecccChhhhcCCC--ccceeh
Confidence            999999999432                   18899 899999876443     347899999999998765  779999


Q ss_pred             HHhhhh
Q 043346          127 WAVLYL  132 (135)
Q Consensus       127 wslg~i  132 (135)
                      ||++++
T Consensus       260 wsl~~~  265 (336)
T 2vuw_A          260 YRLMKK  265 (336)
T ss_dssp             HHHHHH
T ss_pred             hhhhCC
Confidence            998776

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.96  E-value=1.4e-28  Score=167.33  Aligned_cols=127  Identities=30%  Similarity=0.464  Sum_probs=107.0

Q ss_pred             cchhhhccceec-----ceeEEEeccCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhC-CcccCCCCCcceeee
Q 043346            3 EMMKSMSLWVHK-----RENLVFEYVNINLHKFIQQ--YHPMDSHLIKKFLYCILSGISYCHAR-KIIHRDLTTMNLLAD   74 (135)
Q Consensus         3 ~~~~~~~~~~~~-----~~~lv~e~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~-~i~h~dl~~~nil~~   74 (135)
                      |++++++.+...     ..+++||+++++|.+++..  ...+++..+..++.|++.|+.|||++ |++|+||||+||+++
T Consensus        87 ~i~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~  166 (373)
T 1q8y_A           87 HILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLME  166 (373)
T ss_dssp             TBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEE
T ss_pred             hHHHHHHHhhccCCCCceEEEEEecCCCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEe
Confidence            677887777532     6789999998899999987  34699999999999999999999998 999999999999996


Q ss_pred             c-----CCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           75 I-----ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        75 ~-----~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .     ....+++ +|||++......   .....+|+.|+|||++.+.. ++.++|+||||+++|
T Consensus       167 ~~~~~~~~~~~kl-~Dfg~a~~~~~~---~~~~~~t~~y~aPE~~~~~~-~~~~~Di~slG~il~  226 (373)
T 1q8y_A          167 IVDSPENLIQIKI-ADLGNACWYDEH---YTNSIQTREYRSPEVLLGAP-WGCGADIWSTACLIF  226 (373)
T ss_dssp             EEETTTTEEEEEE-CCCTTCEETTBC---CCSCCSCGGGCCHHHHHTCC-CCTHHHHHHHHHHHH
T ss_pred             ccCCCcCcceEEE-cccccccccCCC---CCCCCCCccccCcHHHhCCC-CCchHhHHHHHHHHH
Confidence            2     2347888 899999766432   33457899999999998876 788999999999997

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.96  E-value=5.3e-29  Score=165.29  Aligned_cols=131  Identities=18%  Similarity=0.303  Sum_probs=105.3

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      .|++++++++..+ ..++|||+++ ++|.+++.. ...+++..+..++.|++.|+.+||+++++|+||+|+||+++ ..+
T Consensus        76 ~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~-~~~  154 (302)
T 2j7t_A           76 PYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMT-LEG  154 (302)
T ss_dssp             TTBCCEEEEEECC-CEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEC-TTS
T ss_pred             CCEeeeeeeeeeCCeEEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEC-CCC
Confidence            4778888877544 8899999996 599998876 56799999999999999999999999999999999999999 668


Q ss_pred             eeEEecccccccccCCCCCCCCCCcccccccCccccc----CCCCCCchhHHHHhhhhhh
Q 043346           79 TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILF----GRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~----~~~~~~~~~D~wslg~il~  134 (135)
                      .+++ +|||++..............+++.|+|||++.    .....+.++|+||||+++|
T Consensus       155 ~~kl-~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~  213 (302)
T 2j7t_A          155 DIRL-ADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLI  213 (302)
T ss_dssp             CEEE-CCCHHHHHHHHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHH
T ss_pred             CEEE-EECCCCccccccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHH
Confidence            8999 89998764332222234457889999999984    2333778999999999987

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.95  E-value=2.7e-28  Score=164.29  Aligned_cols=131  Identities=26%  Similarity=0.338  Sum_probs=108.6

Q ss_pred             ccchhhhccceec-----ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHh--------hCCcccCCCC
Q 043346            2 QEMMKSMSLWVHK-----RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCH--------ARKIIHRDLT   67 (135)
Q Consensus         2 ~~~~~~~~~~~~~-----~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh--------~~~i~h~dl~   67 (135)
                      .|++++++.+...     ..++|||+++ ++|.+++.+ ..+++..+..++.|++.|+.|||        +.+++|+|||
T Consensus        96 ~ni~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlk  174 (342)
T 1b6c_B           96 ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR-YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLK  174 (342)
T ss_dssp             TTBCCEEEEEECCCSSCCCEEEEECCCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCS
T ss_pred             CcEEEEEeeecccCCccceeEEEEeecCCCcHHHHHhc-cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCC
Confidence            4678887777544     5789999996 599999987 57899999999999999999999        8999999999


Q ss_pred             CcceeeecCCCeeEEecccccccccCCCCC----CCCCCcccccccCcccccCCCCC-----CchhHHHHhhhhhhC
Q 043346           68 TMNLLADIENKTVKIAADSGMAKEIDAPFD----AHTTEMVILRYRAPKILFGRTNC-----FAAIDMWAVLYLLRW  135 (135)
Q Consensus        68 ~~nil~~~~~~~~~i~~d~~~~~~~~~~~~----~~~~~~~~~~~~ape~~~~~~~~-----~~~~D~wslg~il~~  135 (135)
                      |+||+++ ..+.+++ +|||++........    ......+|+.|+|||++.+....     +.++|+||||+++|.
T Consensus       175 p~NIll~-~~~~~kL-~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~e  249 (342)
T 1b6c_B          175 SKNILVK-KNGTCCI-ADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE  249 (342)
T ss_dssp             GGGEEEC-TTSCEEE-CCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHEEEC-CCCCEEE-EECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHH
Confidence            9999999 6688999 89999976654422    23455789999999999765322     267999999999973

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.95  E-value=1.4e-28  Score=164.08  Aligned_cols=131  Identities=20%  Similarity=0.315  Sum_probs=109.1

Q ss_pred             ccchhhhcccee-cceeEEEec-cC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVH-KRENLVFEY-VN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~-~~~~lv~e~-~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      .|++++++++.. +..++++|+ +. ++|.+++.+++.+++..+..++.|++.|+.|||+++++|+||+|+||+++...+
T Consensus        98 ~~i~~~~~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~  177 (312)
T 2iwi_A           98 PGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRG  177 (312)
T ss_dssp             SSBCCEEEEC-----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTT
T ss_pred             CCeeeEEEEEecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCC
Confidence            477888887744 478899998 54 699999998888999999999999999999999999999999999999986678


Q ss_pred             eeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           79 TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      .+++ +|||++......  ......+++.|+|||++.+....+.++|+||||+++|+
T Consensus       178 ~~kl-~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~  231 (312)
T 2iwi_A          178 CAKL-IDFGSGALLHDE--PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYD  231 (312)
T ss_dssp             EEEE-CCCSSCEECCSS--CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHH
T ss_pred             eEEE-EEcchhhhcccC--cccccCCcccccCceeeecCCCCCccchHHHHHHHHHH
Confidence            8999 899998876543  23455689999999999766644568999999999873

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.95  E-value=4.9e-28  Score=159.70  Aligned_cols=128  Identities=20%  Similarity=0.321  Sum_probs=104.1

Q ss_pred             ccchhhhccceecceeEEEeccC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCC--cccCCCCCcceeeecCC
Q 043346            2 QEMMKSMSLWVHKRENLVFEYVN-INLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARK--IIHRDLTTMNLLADIEN   77 (135)
Q Consensus         2 ~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~--i~h~dl~~~nil~~~~~   77 (135)
                      .|++++++++.+. .++|||+++ ++|.+++.+ ...+++..+..++.|++.|+.|||+++  ++|+||||+||+++. .
T Consensus        83 ~~i~~~~~~~~~~-~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~-~  160 (287)
T 4f0f_A           83 PNIVKLYGLMHNP-PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQS-L  160 (287)
T ss_dssp             TTBCCEEEEETTT-TEEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESC-C
T ss_pred             CCchhhheeecCC-CeEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEec-c
Confidence            4677888777554 479999996 699998865 457999999999999999999999999  999999999999983 3


Q ss_pred             Ce-----eEEecccccccccCCCCCCCCCCcccccccCcccccCC-CCCCchhHHHHhhhhhhC
Q 043346           78 KT-----VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGR-TNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        78 ~~-----~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~~D~wslg~il~~  135 (135)
                      +.     +++ +|||++.....   ......+++.|+|||++.+. ..++.++|+||+|+++|.
T Consensus       161 ~~~~~~~~kl-~Dfg~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~  220 (287)
T 4f0f_A          161 DENAPVCAKV-ADFGLSQQSVH---SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYT  220 (287)
T ss_dssp             CTTCSCCEEE-CCCTTCBCCSS---CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHH
T ss_pred             CCCCceeEEe-CCCCccccccc---cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHH
Confidence            33     888 89999875433   23446789999999998432 235789999999999873

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.95  E-value=4.9e-28  Score=159.82  Aligned_cols=129  Identities=24%  Similarity=0.354  Sum_probs=108.9

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC--
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN--   77 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~--   77 (135)
                      +|++++++++.+. ..++++|++. ++|.+++.+...+++..+..++.|++.|+.+||+++++|+||+|+||+++..+  
T Consensus        81 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~  160 (287)
T 2wei_A           81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKD  160 (287)
T ss_dssp             TTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTT
T ss_pred             CCccEEEEEEeCCCeEEEEEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCc
Confidence            4678888887554 7889999995 69999998878899999999999999999999999999999999999997432  


Q ss_pred             CeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           78 KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ..+++ +|||++...... .......+++.|+|||.+.+.  .+.++|+||||+++|
T Consensus       161 ~~~kL-~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~--~~~~~Di~slG~~l~  213 (287)
T 2wei_A          161 CDIKI-IDFGLSTCFQQN-TKMKDRIGTAYYIAPEVLRGT--YDEKCDVWSAGVILY  213 (287)
T ss_dssp             CCEEE-CSTTGGGTBCCC-SSCSCHHHHHTTCCHHHHTTC--CCTHHHHHHHHHHHH
T ss_pred             ccEEE-eccCcceeecCC-CccccccCcccccChHHhcCC--CCCchhhHhHHHHHH
Confidence            36889 899999876544 233445688999999998764  678999999999987

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.95  E-value=2.9e-29  Score=164.87  Aligned_cols=131  Identities=21%  Similarity=0.351  Sum_probs=106.5

Q ss_pred             ccchhhhccce---ecceeEEEeccC-CCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHhhCC-----cccCCCCC
Q 043346            2 QEMMKSMSLWV---HKRENLVFEYVN-INLHKFIQQY----HPMDSHLIKKFLYCILSGISYCHARK-----IIHRDLTT   68 (135)
Q Consensus         2 ~~~~~~~~~~~---~~~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lh~~~-----i~h~dl~~   68 (135)
                      .|++++++.+.   ++..++|||+++ ++|.+++...    ..+++..+..++.|++.|+++||+++     ++|+||+|
T Consensus        65 ~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p  144 (279)
T 2w5a_A           65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKP  144 (279)
T ss_dssp             TTBCCEEEEEEEGGGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSG
T ss_pred             CCCCeEEEEEecCCCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccch
Confidence            47788887663   337899999996 5999999753    34899999999999999999999999     99999999


Q ss_pred             cceeeecCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           69 MNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        69 ~nil~~~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +||+++ ..+.+++ +|||.+..............+++.|+|||++.+.. ++.++|+||||+++|+
T Consensus       145 ~NIl~~-~~~~~kl-~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~  208 (279)
T 2w5a_A          145 ANVFLD-GKQNVKL-GDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMS-YNEKSDIWSLGCLLYE  208 (279)
T ss_dssp             GGEEEC-SSSCEEE-CCCCHHHHC---CHHHHHHHSCCTTCCHHHHHCC--CCHHHHHHHHHHHHHH
T ss_pred             hhEEEc-CCCCEEE-ecCchheeeccccccccccCCCccccChHHhccCC-CCchhhHHHHHHHHHH
Confidence            999999 6788999 89999987654433334456889999999998765 7889999999999873

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.95  E-value=1.4e-28  Score=161.68  Aligned_cols=128  Identities=22%  Similarity=0.397  Sum_probs=100.6

Q ss_pred             ccchhhhccce-e-cceeEEEeccCC-CHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecC
Q 043346            2 QEMMKSMSLWV-H-KRENLVFEYVNI-NLHKFIQQYH--PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE   76 (135)
Q Consensus         2 ~~~~~~~~~~~-~-~~~~lv~e~~~~-~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~   76 (135)
                      .|++++++++. + +..+++||++++ +|.+++.+.+  .+++..+..++.|++.|+.+||+++++|+||+|+||+++ .
T Consensus        74 ~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~-~  152 (278)
T 1byg_A           74 SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVS-E  152 (278)
T ss_dssp             TTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC-T
T ss_pred             CCEeeEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEe-C
Confidence            46788888753 3 368999999965 9999998743  388999999999999999999999999999999999999 6


Q ss_pred             CCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           77 NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        77 ~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ++.+++ +|||++......   .....+++.|+|||++.+.. .+.++|+||||+++|+
T Consensus       153 ~~~~~l-~Dfg~~~~~~~~---~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~  206 (278)
T 1byg_A          153 DNVAKV-SDFGLTKEASST---QDTGKLPVKWTAPEALREKK-FSTKSDVWSFGILLWE  206 (278)
T ss_dssp             TSCEEE-CCCCC---------------CCTTTSCHHHHHHCC-CCHHHHHHHHHHHHHH
T ss_pred             CCcEEE-eecccccccccc---ccCCCccccccCHHHhCCCC-CCchhcHHHHHHHHHH
Confidence            788999 899998765433   22335678899999997665 7889999999999873

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.95  E-value=2.1e-28  Score=164.30  Aligned_cols=132  Identities=20%  Similarity=0.325  Sum_probs=107.2

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCccee
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQY-------HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLL   72 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~-------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil   72 (135)
                      .|++++++++.++ ..++|||++. ++|.+++...       ..++...+..++.|++.|+.|||+++++|+||+|+||+
T Consensus        93 ~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIl  172 (327)
T 2yfx_A           93 QNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCL  172 (327)
T ss_dssp             TTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEE
T ss_pred             CCCCeEEEEEcCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEE
Confidence            4788888888555 7899999994 6999999874       34889999999999999999999999999999999999


Q ss_pred             eec--CCCeeEEecccccccccCCCC--CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           73 ADI--ENKTVKIAADSGMAKEIDAPF--DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        73 ~~~--~~~~~~i~~d~~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ++.  ....+++ +|||++.......  .......+++.|+|||++.+.. ++.++|+||||+++|+
T Consensus       173 i~~~~~~~~~kl-~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~e  237 (327)
T 2yfx_A          173 LTCPGPGRVAKI-GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGI-FTSKTDTWSFGVLLWE  237 (327)
T ss_dssp             ESCSSTTCCEEE-CCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCC-CCHHHHHHHHHHHHHH
T ss_pred             EecCCCcceEEE-CccccccccccccccccCCCcCCCcceeCHhHhcCCC-CCchhhHHHHHHHHHH
Confidence            983  2346888 8999997553322  2233456788999999997765 7889999999999873

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.95  E-value=6.6e-28  Score=157.60  Aligned_cols=126  Identities=17%  Similarity=0.286  Sum_probs=103.3

Q ss_pred             ccchhhhcccee---cceeEEEeccC-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhCC--cccCCCCCcceee
Q 043346            2 QEMMKSMSLWVH---KRENLVFEYVN-INLHKFIQQYH--PMDSHLIKKFLYCILSGISYCHARK--IIHRDLTTMNLLA   73 (135)
Q Consensus         2 ~~~~~~~~~~~~---~~~~lv~e~~~-~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lh~~~--i~h~dl~~~nil~   73 (135)
                      .|++++++++.+   +..+++||+++ ++|.+++....  .+++..+..++.|++.|+.|||+++  ++|+||+|+||++
T Consensus        67 ~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~  146 (271)
T 3kmu_A           67 PNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMI  146 (271)
T ss_dssp             TTEECEEEEECTTTSSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEE
T ss_pred             CchhheEEEEccCCCCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEE
Confidence            477888887744   46799999995 69999998754  5899999999999999999999999  9999999999999


Q ss_pred             ecCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCC--CchhHHHHhhhhhh
Q 043346           74 DIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNC--FAAIDMWAVLYLLR  134 (135)
Q Consensus        74 ~~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~--~~~~D~wslg~il~  134 (135)
                      + ..+.+++ .+++++.....     ....+|+.|+|||++.+....  +.++|+||||+++|
T Consensus       147 ~-~~~~~~l-~~~~~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~  202 (271)
T 3kmu_A          147 D-EDMTARI-SMADVKFSFQS-----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLW  202 (271)
T ss_dssp             C-TTSCEEE-EGGGSCCTTSC-----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHH
T ss_pred             c-CCcceeE-Eeccceeeecc-----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHH
Confidence            9 6677787 67776654322     334678999999999775422  23799999999987

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.95  E-value=1.8e-28  Score=166.14  Aligned_cols=126  Identities=26%  Similarity=0.509  Sum_probs=102.9

Q ss_pred             ccchhhhccceec-------ceeEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeee
Q 043346            2 QEMMKSMSLWVHK-------RENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD   74 (135)
Q Consensus         2 ~~~~~~~~~~~~~-------~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~   74 (135)
                      .|++++++++...       ..+++||+++++|.+++..  .+++..+..++.|++.|+.|||++|++|+||+|+||+++
T Consensus        83 ~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~--~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~  160 (353)
T 3coi_A           83 ENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGL--KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVN  160 (353)
T ss_dssp             TTBCCCSEEECSCSSGGGCCCCEEEEECCSEEGGGTTTS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEEC
T ss_pred             CCcccHhheEecccccccceeEEEEeccccCCHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeEC
Confidence            4677887777543       2499999999888877643  589999999999999999999999999999999999999


Q ss_pred             cCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           75 IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        75 ~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                       ..+.+++ +|||++......   .....+|+.|+|||++.+...++.++|+||+|+++|
T Consensus       161 -~~~~~kl-~Dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~  215 (353)
T 3coi_A          161 -EDCELKI-LDFGLARHADAE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMA  215 (353)
T ss_dssp             -TTCCEEE-CSTTCTTC-----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHH
T ss_pred             -CCCcEEE-eecccccCCCCC---ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHH
Confidence             6788999 899998765432   334577899999999987555788999999999987

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.95  E-value=9.4e-28  Score=159.46  Aligned_cols=131  Identities=19%  Similarity=0.360  Sum_probs=107.5

Q ss_pred             ccchhhhccce---ecceeEEEeccCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecC
Q 043346            2 QEMMKSMSLWV---HKRENLVFEYVNINLHKFIQQ--YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE   76 (135)
Q Consensus         2 ~~~~~~~~~~~---~~~~~lv~e~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~   76 (135)
                      .|++++++++.   ....++|||+++++|.+++..  ...+++..+..++.|++.|+.+||+++++|+||+|+||+++ .
T Consensus        66 ~~i~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~-~  144 (305)
T 2wtk_C           66 KNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLT-T  144 (305)
T ss_dssp             TTBCCEEEEEECC---CEEEEEECCSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-T
T ss_pred             CCeeEEEEEEEcCCCCeEEEEehhccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEc-C
Confidence            46788888762   237899999998878888876  45789999999999999999999999999999999999999 6


Q ss_pred             CCeeEEecccccccccCCC--CCCCCCCcccccccCcccccCCCC-CCchhHHHHhhhhhh
Q 043346           77 NKTVKIAADSGMAKEIDAP--FDAHTTEMVILRYRAPKILFGRTN-CFAAIDMWAVLYLLR  134 (135)
Q Consensus        77 ~~~~~i~~d~~~~~~~~~~--~~~~~~~~~~~~~~ape~~~~~~~-~~~~~D~wslg~il~  134 (135)
                      ++.+++ +|||.+......  ........+++.|+|||++.+... .+.++|+||||+++|
T Consensus       145 ~~~~kl-~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~  204 (305)
T 2wtk_C          145 GGTLKI-SALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLY  204 (305)
T ss_dssp             TCCEEE-CCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHH
T ss_pred             CCcEEe-eccccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHH
Confidence            788999 899999876432  122345678999999999976432 367899999999987

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.95  E-value=1.8e-28  Score=165.64  Aligned_cols=130  Identities=20%  Similarity=0.364  Sum_probs=109.5

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHH------HHh--cCCCCHHHHHHHHHHHHHHHHHHhh-CCcccCCCCCcc
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKF------IQQ--YHPMDSHLIKKFLYCILSGISYCHA-RKIIHRDLTTMN   70 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~------~~~--~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~~~n   70 (135)
                      .|++++++++.+. ..++|||+++ ++|.++      +.+  ...+++..+..++.|++.|+.|||+ +|++|+||+|+|
T Consensus       103 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~N  182 (348)
T 2pml_X          103 EYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSN  182 (348)
T ss_dssp             TTBCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGG
T ss_pred             CCcceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHh
Confidence            4678888887554 7899999996 499998      665  5679999999999999999999999 999999999999


Q ss_pred             eeeecCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCc-hhHHHHhhhhhhC
Q 043346           71 LLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFA-AIDMWAVLYLLRW  135 (135)
Q Consensus        71 il~~~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~-~~D~wslg~il~~  135 (135)
                      |+++ ..+.+++ +|||.+......  ......+++.|+|||++.+...++. ++|+||+|+++|+
T Consensus       183 il~~-~~~~~kl-~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~  244 (348)
T 2pml_X          183 ILMD-KNGRVKL-SDFGESEYMVDK--KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYV  244 (348)
T ss_dssp             EEEC-TTSCEEE-CCCTTCEECBTT--EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHH
T ss_pred             EEEc-CCCcEEE-eccccccccccc--cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHH
Confidence            9999 6788999 899999876443  3345678999999999987743444 8999999999873

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.95  E-value=5.6e-28  Score=161.42  Aligned_cols=131  Identities=20%  Similarity=0.235  Sum_probs=104.5

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYH-PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      .|++++++++.++ ..+++||++. ++|.+++...+ .+++..+..++.|++.|+.+||+++++|+||+|+||+++  ++
T Consensus        89 ~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~--~~  166 (319)
T 2y4i_B           89 ENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD--NG  166 (319)
T ss_dssp             TTBCCCCEEEECSSCEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC----
T ss_pred             CCEeEEEEEEecCCceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe--CC
Confidence            4778888888554 7899999996 59999998744 689999999999999999999999999999999999998  46


Q ss_pred             eeEEecccccccccCCC-----CCCCCCCcccccccCcccccC--------CCCCCchhHHHHhhhhhhC
Q 043346           79 TVKIAADSGMAKEIDAP-----FDAHTTEMVILRYRAPKILFG--------RTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~-----~~~~~~~~~~~~~~ape~~~~--------~~~~~~~~D~wslg~il~~  135 (135)
                      .+++ +|||++......     ........+++.|+|||++.+        ...++.++|+||||+++|+
T Consensus       167 ~~~l-~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~e  235 (319)
T 2y4i_B          167 KVVI-TDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYE  235 (319)
T ss_dssp             CCEE-CCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHH
T ss_pred             CEEE-eecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHH
Confidence            7888 899987654321     122334568899999999965        2236789999999999873

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.95  E-value=2.4e-28  Score=164.78  Aligned_cols=129  Identities=22%  Similarity=0.319  Sum_probs=90.6

Q ss_pred             ccchhhhcccee-----cceeEEEeccCC-CHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceee
Q 043346            2 QEMMKSMSLWVH-----KRENLVFEYVNI-NLHKFIQQYH--PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLA   73 (135)
Q Consensus         2 ~~~~~~~~~~~~-----~~~~lv~e~~~~-~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~   73 (135)
                      .|++++++++..     ...++|||++++ +|.+++.+.+  .+++..+..++.|++.|+.|||+++++|+||||+||++
T Consensus        82 ~~i~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll  161 (336)
T 3fhr_A           82 PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLY  161 (336)
T ss_dssp             TTBCCEEEEEEEEETTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE
T ss_pred             CChHHHHHHHhhccCCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence            367777777643     257899999965 9999998743  69999999999999999999999999999999999999


Q ss_pred             ecC--CCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           74 DIE--NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        74 ~~~--~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +..  .+.+++ +|||++......  ......+|+.|+|||++.+.. ++.++|+||||+++|
T Consensus       162 ~~~~~~~~~kl-~Dfg~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~-~~~~~Di~slG~il~  220 (336)
T 3fhr_A          162 TSKEKDAVLKL-TDFGFAKETTQN--ALQTPCYTPYYVAPEVLGPEK-YDKSCDMWSLGVIMY  220 (336)
T ss_dssp             SCSSTTCCEEE-CCCTTCEEC------------------------CH-HHHHHHHHHHHHHHH
T ss_pred             EecCCCceEEE-eccccceecccc--ccccCCCCcCccChhhhCCCC-CCchhhHHHHHHHHH
Confidence            842  345889 899999765433  233456799999999997665 678999999999987

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.95  E-value=5.8e-28  Score=162.10  Aligned_cols=130  Identities=24%  Similarity=0.397  Sum_probs=107.8

Q ss_pred             ccchhhhcccee---cceeEEEeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecC
Q 043346            2 QEMMKSMSLWVH---KRENLVFEYVN-INLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE   76 (135)
Q Consensus         2 ~~~~~~~~~~~~---~~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~   76 (135)
                      .|++++++++..   ...++|||+++ ++|.+++.+. ..+++..+..++.|++.|+.+||+++++|+||||+||+++ .
T Consensus       102 ~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~-~  180 (326)
T 2w1i_A          102 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE-N  180 (326)
T ss_dssp             TTBCCEEEEECC----CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEE-E
T ss_pred             CCeeeEEEEEEecCCCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEc-C
Confidence            467777776533   26789999995 5999999875 4689999999999999999999999999999999999999 6


Q ss_pred             CCeeEEecccccccccCCCCC---CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           77 NKTVKIAADSGMAKEIDAPFD---AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        77 ~~~~~i~~d~~~~~~~~~~~~---~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .+.+++ +|||++........   ......++..|+|||.+.+.. .+.++|+||||+++|
T Consensus       181 ~~~~kL-~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~  239 (326)
T 2w1i_A          181 ENRVKI-GDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESK-FSVASDVWSFGVVLY  239 (326)
T ss_dssp             TTEEEE-CCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCE-EEHHHHHHHHHHHHH
T ss_pred             CCcEEE-ecCcchhhccccccccccccCCCCceeEECchhhcCCC-CCchhhHHHHHHHHH
Confidence            788999 89999987654322   123445677899999997765 678999999999987

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.95  E-value=4.8e-28  Score=161.69  Aligned_cols=132  Identities=18%  Similarity=0.297  Sum_probs=106.2

Q ss_pred             ccchhhhccce-----ecceeEEEeccC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcce
Q 043346            2 QEMMKSMSLWV-----HKRENLVFEYVN-INLHKFIQQ----YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNL   71 (135)
Q Consensus         2 ~~~~~~~~~~~-----~~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~ni   71 (135)
                      .|++++++++.     ....++|||++. ++|.+++..    +..+++..+..++.|++.|+.+||+++++|+||+|+||
T Consensus        86 ~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NI  165 (317)
T 2buj_A           86 PNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNI  165 (317)
T ss_dssp             TTBCCCCEEEEEEETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGE
T ss_pred             CCeeeEEEEEEeccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHE
Confidence            47788888774     236889999995 599999975    46799999999999999999999999999999999999


Q ss_pred             eeecCCCeeEEecccccccccCCCCCC---------CCCCcccccccCcccccCCCC--CCchhHHHHhhhhhhC
Q 043346           72 LADIENKTVKIAADSGMAKEIDAPFDA---------HTTEMVILRYRAPKILFGRTN--CFAAIDMWAVLYLLRW  135 (135)
Q Consensus        72 l~~~~~~~~~i~~d~~~~~~~~~~~~~---------~~~~~~~~~~~ape~~~~~~~--~~~~~D~wslg~il~~  135 (135)
                      +++ ..+.+++ +|||.+.........         .....+++.|+|||++.+...  ++.++|+||||+++|+
T Consensus       166 l~~-~~~~~kl-~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~e  238 (317)
T 2buj_A          166 LLG-DEGQPVL-MDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYA  238 (317)
T ss_dssp             EEC-TTSCEEE-CCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHH
T ss_pred             EEc-CCCCEEE-EecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHH
Confidence            998 6788999 899988754321110         122346889999999865432  5779999999999873

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.95  E-value=3.7e-28  Score=176.55  Aligned_cols=122  Identities=23%  Similarity=0.316  Sum_probs=101.3

Q ss_pred             ccchhhhccceec-c-----eeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeee
Q 043346            2 QEMMKSMSLWVHK-R-----ENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD   74 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~-----~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~   74 (135)
                      .||+++++++.+. .     .|+||||++ ++|.+++..  .+++..+..++.|++.||.|||++|++||||||+||+++
T Consensus       139 p~iv~~~~~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~~--~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~  216 (681)
T 2pzi_A          139 PSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ--KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLT  216 (681)
T ss_dssp             TTBCCEEEEEEEECTTSCEEEEEEEECCCCEECC----C--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC
T ss_pred             CCcCeEeeeEeecCCCCCceeEEEEEeCCCCcHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEe
Confidence            4788888888654 3     599999996 488887655  789999999999999999999999999999999999998


Q ss_pred             cCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           75 IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        75 ~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .  +.+++ +|||++......    ....||+.|+|||++.+..  +.++|+||||+++|
T Consensus       217 ~--~~~kl-~DFG~a~~~~~~----~~~~gt~~y~aPE~~~~~~--~~~sDi~slG~~l~  267 (681)
T 2pzi_A          217 E--EQLKL-IDLGAVSRINSF----GYLYGTPGFQAPEIVRTGP--TVATDIYTVGRTLA  267 (681)
T ss_dssp             S--SCEEE-CCCTTCEETTCC----SCCCCCTTTSCTTHHHHCS--CHHHHHHHHHHHHH
T ss_pred             C--CcEEE-EecccchhcccC----CccCCCccccCHHHHcCCC--CCceehhhhHHHHH
Confidence            3  37899 899999876443    4557899999999997653  78999999999987

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.95  E-value=1.3e-27  Score=159.44  Aligned_cols=131  Identities=18%  Similarity=0.328  Sum_probs=99.0

Q ss_pred             ccchhhhccceec-ceeEEEeccCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhC-CcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNINLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHAR-KIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~-~i~h~dl~~~nil~~~~~~   78 (135)
                      .|++++++++.++ ..++|||++++.+...... .+.+++..+..++.|++.|+.|||++ +++|+||+|+||+++ ..+
T Consensus        84 ~~i~~~~~~~~~~~~~~lv~e~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~-~~~  162 (318)
T 2dyl_A           84 PYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLD-ERG  162 (318)
T ss_dssp             TTBCCEEEEEECSSEEEEEECCCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEEC-TTS
T ss_pred             CceeeEEEEEecCCcEEEEEeccCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEEC-CCC
Confidence            4788888888554 7899999997666666654 56899999999999999999999996 999999999999999 678


Q ss_pred             eeEEecccccccccCCCCCCCCCCcccccccCcccccC----CCCCCchhHHHHhhhhhhC
Q 043346           79 TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFG----RTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~----~~~~~~~~D~wslg~il~~  135 (135)
                      .+++ +|||++...... .......+++.|+|||++.+    ...++.++|+||+|+++|+
T Consensus       163 ~~kl-~dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~  221 (318)
T 2dyl_A          163 QIKL-CDFGISGRLVDD-KAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVE  221 (318)
T ss_dssp             CEEE-CCCTTC---------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHH
T ss_pred             CEEE-EECCCchhccCC-ccccccCCCccccChhhcccccccccCCccccchhhHHHHHHH
Confidence            8999 899998765443 22334568999999999952    3336789999999999873

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.94  E-value=7.3e-27  Score=168.52  Aligned_cols=130  Identities=28%  Similarity=0.396  Sum_probs=106.9

Q ss_pred             cchhhhccce-------ecceeEEEecc-CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcce
Q 043346            3 EMMKSMSLWV-------HKRENLVFEYV-NINLHKFIQQYH---PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNL   71 (135)
Q Consensus         3 ~~~~~~~~~~-------~~~~~lv~e~~-~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~ni   71 (135)
                      |++++++++.       ++..++||||+ +++|.+++....   .+++..+..++.|++.|+.|||++|++|+||+|+||
T Consensus        73 nIV~l~~v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NI  152 (676)
T 3qa8_A           73 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENI  152 (676)
T ss_dssp             TBCCEEECCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTE
T ss_pred             CCCceeeeecccccccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHe
Confidence            5666655542       34778999999 569999998743   689999999999999999999999999999999999


Q ss_pred             eeecCCC--eeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           72 LADIENK--TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        72 l~~~~~~--~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++.++.  .+++ +|||.+...... .......+++.|+|||.+.+.. ++.++|+||+|+++|.
T Consensus       153 Ll~~~g~~~~vKL-~DFG~a~~~~~~-~~~~~~~gt~~Y~APE~l~~~~-~s~ksDIwSLGviLye  215 (676)
T 3qa8_A          153 VLQPGPQRLIHKI-IDLGYAKELDQG-ELCTEFVGTLQYLAPELLEQKK-YTVTVDYWSFGTLAFE  215 (676)
T ss_dssp             EEECCSSSCEEEE-CSCCCCCBTTSC-CCCCCCCSCCTTCSSCSSCCSC-CSTTHHHHHHHHHHHH
T ss_pred             EeecCCCceeEEE-cccccccccccc-cccccccCCcccCChHHhccCC-CCchhHHHHHHHHHHH
Confidence            9984332  3788 899999876544 3345567899999999998766 7889999999999873

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.94  E-value=3.6e-27  Score=162.91  Aligned_cols=115  Identities=14%  Similarity=0.204  Sum_probs=94.1

Q ss_pred             ceeEEEeccCCCHHHHHHh-------cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEecccc
Q 043346           15 RENLVFEYVNINLHKFIQQ-------YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSG   87 (135)
Q Consensus        15 ~~~lv~e~~~~~L~~~~~~-------~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~~   87 (135)
                      ..+++|+.++++|.++++.       +..+++.....++.|++.||+|||+++++||||||+||+++ ..+.+|+ +|||
T Consensus       179 ~~~~~~~~~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiKp~NILl~-~~~~~kL-~DFG  256 (413)
T 3dzo_A          179 SRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLD-QRGGVFL-TGFE  256 (413)
T ss_dssp             SEEEEEECCSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC-TTCCEEE-CCGG
T ss_pred             ceEEEeehhcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcccceEEEe-cCCeEEE-Eecc
Confidence            4678888888899998852       23467778899999999999999999999999999999999 6677999 8999


Q ss_pred             cccccCCCCCCCCCCcccccccCccccc---------CCCCCCchhHHHHhhhhhhC
Q 043346           88 MAKEIDAPFDAHTTEMVILRYRAPKILF---------GRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~ape~~~---------~~~~~~~~~D~wslg~il~~  135 (135)
                      +++.....   .....| +.|+|||++.         ....++.++|+|||||++|.
T Consensus       257 ~a~~~~~~---~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~e  309 (413)
T 3dzo_A          257 HLVRDGAS---AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYW  309 (413)
T ss_dssp             GCEETTEE---ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHH
T ss_pred             ceeecCCc---cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHH
Confidence            98765433   344566 8999999993         22236779999999999973

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.91  E-value=1.9e-24  Score=143.43  Aligned_cols=110  Identities=25%  Similarity=0.360  Sum_probs=91.7

Q ss_pred             ccchhhhcccee-----cceeEEEeccC-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceee
Q 043346            2 QEMMKSMSLWVH-----KRENLVFEYVN-INLHKFIQQYH--PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLA   73 (135)
Q Consensus         2 ~~~~~~~~~~~~-----~~~~lv~e~~~-~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~   73 (135)
                      .|++++++++..     ...++|||+++ ++|.+++....  .+++..+..++.|++.|+.|||+++++|+||||+||++
T Consensus        71 ~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~  150 (299)
T 3m2w_A           71 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLY  150 (299)
T ss_dssp             TTBCCEEEEEEEEETTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE
T ss_pred             CCchhHHhhhhhhcCCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE
Confidence            467788777643     47899999995 59999998743  69999999999999999999999999999999999999


Q ss_pred             ecC--CCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           74 DIE--NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        74 ~~~--~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +..  .+.+++ +|||++.....                      .. ++.++|+||+|+++|.
T Consensus       151 ~~~~~~~~~kl-~Dfg~a~~~~~----------------------~~-~~~~~DiwslG~il~e  190 (299)
T 3m2w_A          151 TSKRPNAILKL-TDFGFAKETTG----------------------EK-YDKSCDMWSLGVIMYI  190 (299)
T ss_dssp             SSSSTTCCEEE-CCCTTCEECTT----------------------CG-GGGHHHHHHHHHHHHH
T ss_pred             ecCCCCCcEEE-ecccccccccc----------------------cc-CCchhhHHHHHHHHHH
Confidence            943  577899 89998864321                      12 5678999999999873

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.90  E-value=1.2e-23  Score=139.13  Aligned_cols=102  Identities=8%  Similarity=-0.015  Sum_probs=84.3

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|++++++++..+ ..|+||||++ ++|.+++++ + ..+.++..++.|++.|++|||++|++||||||+||+++ ..+.
T Consensus        91 p~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~-~-~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~-~~g~  167 (286)
T 3uqc_A           91 PGVARVLDVVHTRAGGLVVAEWIRGGSLQEVADT-S-PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVS-IDGD  167 (286)
T ss_dssp             TTBCCEEEEEEETTEEEEEEECCCEEEHHHHHTT-C-CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEE-TTSC
T ss_pred             CCcceeeEEEEECCcEEEEEEecCCCCHHHHHhc-C-CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEc-CCCC
Confidence            4788888888655 7899999996 599999965 3 46677899999999999999999999999999999999 6677


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ .+.                    .|++|        .+.++|+||||+++|+
T Consensus       168 ~kl-~~~--------------------~~~~~--------~~~~~Di~slG~il~e  194 (286)
T 3uqc_A          168 VVL-AYP--------------------ATMPD--------ANPQDDIRGIGASLYA  194 (286)
T ss_dssp             EEE-CSC--------------------CCCTT--------CCHHHHHHHHHHHHHH
T ss_pred             EEE-Eec--------------------cccCC--------CCchhHHHHHHHHHHH
Confidence            887 321                    23332        5789999999999973

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.85  E-value=2.1e-23  Score=148.32  Aligned_cols=107  Identities=21%  Similarity=0.273  Sum_probs=87.4

Q ss_pred             eecceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEeccccccc
Q 043346           12 VHKRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAK   90 (135)
Q Consensus        12 ~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~   90 (135)
                      .+++.|+||||++ ++|.+++.+        ...++.|++.+++|||+++++||||||+||+++ .  .+++ +|||+++
T Consensus       410 ~~~~~~lVmE~~~ggsL~~~l~~--------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~-~--~~kL-~DFGla~  477 (540)
T 3en9_A          410 DLDNKRIMMSYINGKLAKDVIED--------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFD-K--DLYI-IDFGLGK  477 (540)
T ss_dssp             ETTTTEEEEECCCSEEHHHHSTT--------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEES-S--SEEE-CCCTTCE
T ss_pred             eCCccEEEEECCCCCCHHHHHHH--------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEEC-C--eEEE-EECccCE
Confidence            3447899999995 699999876        568899999999999999999999999999999 4  8899 8999998


Q ss_pred             ccCCCCC-------CCCCCcccccccCcccccC--CCCCCchhHHHHhhh
Q 043346           91 EIDAPFD-------AHTTEMVILRYRAPKILFG--RTNCFAAIDMWAVLY  131 (135)
Q Consensus        91 ~~~~~~~-------~~~~~~~~~~~~ape~~~~--~~~~~~~~D~wslg~  131 (135)
                      .......       ......+|+.|+|||++.+  .. +...+|+||...
T Consensus       478 ~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~-Y~~~~d~ws~vl  526 (540)
T 3en9_A          478 ISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEG-YKSVYDRWEIIL  526 (540)
T ss_dssp             ECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHH-HHHHCTTHHHHH
T ss_pred             ECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHH-HHHHHhHHHHHH
Confidence            7754322       1235688999999999965  32 556678998653

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.72  E-value=8.8e-19  Score=115.67  Aligned_cols=88  Identities=19%  Similarity=0.258  Sum_probs=70.3

Q ss_pred             hhhhccceecceeEEEeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEe
Q 043346            5 MKSMSLWVHKRENLVFEYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIA   83 (135)
Q Consensus         5 ~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~   83 (135)
                      +++.+.+..+..|+|||++++ +|.+ +..      .....++.|++.|+.+||++|++||||||+||+++  .+.+++ 
T Consensus       164 ~~v~~~~~~~~~~lvmE~~~g~~L~~-l~~------~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~--~~~vkl-  233 (282)
T 1zar_A          164 LAVPKVYAWEGNAVLMELIDAKELYR-VRV------ENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS--EEGIWI-  233 (282)
T ss_dssp             SSSCCEEEEETTEEEEECCCCEEGGG-CCC------SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE--TTEEEE-
T ss_pred             CCcCeEEeccceEEEEEecCCCcHHH-cch------hhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE--CCcEEE-
Confidence            455666666788999999965 9887 322      23457999999999999999999999999999999  688999 


Q ss_pred             cccccccccCCCCCCCCCCcccccccCccccc
Q 043346           84 ADSGMAKEIDAPFDAHTTEMVILRYRAPKILF  115 (135)
Q Consensus        84 ~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~  115 (135)
                      +|||++...             ..++|||.+.
T Consensus       234 ~DFG~a~~~-------------~~~~a~e~l~  252 (282)
T 1zar_A          234 IDFPQSVEV-------------GEEGWREILE  252 (282)
T ss_dssp             CCCTTCEET-------------TSTTHHHHHH
T ss_pred             EECCCCeEC-------------CCCCHHHHHH
Confidence            899998643             3356777763

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.51  E-value=1.5e-14  Score=94.31  Aligned_cols=74  Identities=15%  Similarity=0.292  Sum_probs=60.0

Q ss_pred             cceeEEEeccC--C----CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHh-hCCcccCCCCCcceeeecCCCeeEEeccc
Q 043346           14 KRENLVFEYVN--I----NLHKFIQQYHPMDSHLIKKFLYCILSGISYCH-ARKIIHRDLTTMNLLADIENKTVKIAADS   86 (135)
Q Consensus        14 ~~~~lv~e~~~--~----~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh-~~~i~h~dl~~~nil~~~~~~~~~i~~d~   86 (135)
                      ...++||||++  |    +|.+....   .++..+..++.|++.++.+|| +.|++|+||||.||+++ .  .+++ +||
T Consensus       141 ~~~~lVmE~~g~~g~~~~~L~~~~~~---~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~NILl~-~--~~~l-iDF  213 (258)
T 1zth_A          141 MKNVLLMEFIGEDELPAPTLVELGRE---LKELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIMYI-D--KVYF-IDM  213 (258)
T ss_dssp             ETTEEEEECCEETTEECCBHHHHGGG---GGGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTTSEEES-S--SEEE-CCC
T ss_pred             CCCEEEEEecCCCCCccccHHHHhhc---cChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEEc-C--cEEE-EEC
Confidence            35689999994  3    67765433   234567889999999999999 99999999999999999 4  7888 899


Q ss_pred             ccccccCC
Q 043346           87 GMAKEIDA   94 (135)
Q Consensus        87 ~~~~~~~~   94 (135)
                      |++.....
T Consensus       214 G~a~~~~~  221 (258)
T 1zth_A          214 GQAVTLRH  221 (258)
T ss_dssp             TTCEETTS
T ss_pred             cccccCCC
Confidence            99976543

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.23  E-value=6.6e-12  Score=86.00  Aligned_cols=73  Identities=18%  Similarity=0.189  Sum_probs=54.6

Q ss_pred             ceeEEEeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC---------eeEEec
Q 043346           15 RENLVFEYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK---------TVKIAA   84 (135)
Q Consensus        15 ~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~---------~~~i~~   84 (135)
                      ..++|||+++| +|.+...      .+....++.|++.++.++|+.|++||||||.||+++.+..         .+.+ +
T Consensus       185 ~~~LVME~i~G~~L~~l~~------~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~i-I  257 (397)
T 4gyi_A          185 RHTIVMSLVDALPMRQVSS------VPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDAEDPSSITLTPII-I  257 (397)
T ss_dssp             TTEEEEECCSCEEGGGCCC------CSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECSSCTTSEEEEEEE-C
T ss_pred             CceEEEEecCCccHhhhcc------cHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCcccccccccceEE-E
Confidence            44799999976 6643221      1234567899999999999999999999999999983321         3567 7


Q ss_pred             ccccccccCC
Q 043346           85 DSGMAKEIDA   94 (135)
Q Consensus        85 d~~~~~~~~~   94 (135)
                      ||+.+.....
T Consensus       258 D~~Q~V~~~h  267 (397)
T 4gyi_A          258 XFPQMVSMDH  267 (397)
T ss_dssp             CCTTCEETTS
T ss_pred             EeCCcccCCC
Confidence            9998765443

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=98.58  E-value=1.1e-07  Score=61.70  Aligned_cols=78  Identities=19%  Similarity=0.188  Sum_probs=55.1

Q ss_pred             hhhcccee-cceeEEEeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhh-------------------------
Q 043346            6 KSMSLWVH-KRENLVFEYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHA-------------------------   58 (135)
Q Consensus         6 ~~~~~~~~-~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-------------------------   58 (135)
                      +++.+..+ +..|++||+++| +|.+...     +......++.++..++..||+                         
T Consensus        74 ~v~~~~~~~~~~~lv~e~i~G~~l~~~~~-----~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (263)
T 3tm0_A           74 KVLHFERHDGWSNLLMSEADGVLCSEEYE-----DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNN  148 (263)
T ss_dssp             CEEEEEEETTEEEEEEECCSSEEHHHHCC-----TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHT
T ss_pred             eEEEEEecCCceEEEEEecCCeehhhccC-----CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhc
Confidence            34444433 378899999977 8876521     112234667888888899998                         


Q ss_pred             ----------------------------------CCcccCCCCCcceeeecCCCeeEEeccccccc
Q 043346           59 ----------------------------------RKIIHRDLTTMNLLADIENKTVKIAADSGMAK   90 (135)
Q Consensus        59 ----------------------------------~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~   90 (135)
                                                        ..++|+|+++.||+++ +++.+.+ +||+.+.
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~-~~~~~~l-IDwe~a~  212 (263)
T 3tm0_A          149 DLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVK-DGKVSGF-IDLGRSG  212 (263)
T ss_dssp             TCSCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEE-TTEEEEE-CCCTTCE
T ss_pred             cccccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEE-CCcEEEE-EEchhcc
Confidence                                              4588999999999998 4444557 7998764

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=98.32  E-value=1.2e-06  Score=59.27  Aligned_cols=74  Identities=18%  Similarity=0.152  Sum_probs=55.4

Q ss_pred             ceeEEEeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhh-----------------------------------
Q 043346           15 RENLVFEYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHA-----------------------------------   58 (135)
Q Consensus        15 ~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-----------------------------------   58 (135)
                      ..|+|||+++| .+.+.  ....+++.....++.++...+..||+                                   
T Consensus       115 ~~~~vme~v~G~~l~~~--~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (359)
T 3dxp_A          115 RAFYIMEFVSGRVLWDQ--SLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETE  192 (359)
T ss_dssp             SCEEEEECCCCBCCCCT--TCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCS
T ss_pred             CeEEEEEecCCeecCCC--ccccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCc
Confidence            47899999976 54321  12346777888888999999999986                                   


Q ss_pred             -----------------------CCcccCCCCCcceeeecCCCe-eEEecccccccc
Q 043346           59 -----------------------RKIIHRDLTTMNLLADIENKT-VKIAADSGMAKE   91 (135)
Q Consensus        59 -----------------------~~i~h~dl~~~nil~~~~~~~-~~i~~d~~~~~~   91 (135)
                                             ..++|+|+++.||+++.+... +.+ +||+.+..
T Consensus       193 ~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~v-iDwe~a~~  248 (359)
T 3dxp_A          193 SIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAV-LDWELSTL  248 (359)
T ss_dssp             CCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEE-CCCTTCEE
T ss_pred             CChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEE-ECcccccc
Confidence                                   368999999999999844433 466 79998753

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=98.31  E-value=1.8e-06  Score=55.53  Aligned_cols=29  Identities=17%  Similarity=0.282  Sum_probs=23.6

Q ss_pred             cccCCCCCcceeeecCCCeeEEecccccccc
Q 043346           61 IIHRDLTTMNLLADIENKTVKIAADSGMAKE   91 (135)
Q Consensus        61 i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~   91 (135)
                      ++|+|++|.||+++ +++.+.+ +||+.+..
T Consensus       186 l~HgDl~~~Nil~~-~~~~~~l-iD~~~a~~  214 (264)
T 1nd4_A          186 VTHGDACLPNIMVE-NGRFSGF-IDCGRLGV  214 (264)
T ss_dssp             EECSSCCGGGEEEE-TTEEEEE-CCCTTCEE
T ss_pred             EECCCCCCCcEEEE-CCcEEEE-Ecchhccc
Confidence            99999999999998 5454557 79998754

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=97.78  E-value=6.8e-05  Score=49.60  Aligned_cols=31  Identities=35%  Similarity=0.438  Sum_probs=24.4

Q ss_pred             CcccCCCCCcceeeecC-CCeeEEecccccccc
Q 043346           60 KIIHRDLTTMNLLADIE-NKTVKIAADSGMAKE   91 (135)
Q Consensus        60 ~i~h~dl~~~nil~~~~-~~~~~i~~d~~~~~~   91 (135)
                      .++|+|+++.||+++.+ .+.+.+ +||+.+..
T Consensus       192 ~~~HgD~~~~N~l~~~~~~~~~~~-iD~~~~~~  223 (304)
T 3sg8_A          192 CLIHNDFSSDHILFDTEKNTICGI-IDFGDAAI  223 (304)
T ss_dssp             EEECSCCCGGGEEEETTTTEEEEE-CCCTTCEE
T ss_pred             eeEeCCCCcccEEEeCCCCCEEEE-EeCCCCcc
Confidence            47999999999999943 445667 79998764

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=97.46  E-value=0.0019  Score=40.95  Aligned_cols=93  Identities=12%  Similarity=0.113  Sum_probs=56.5

Q ss_pred             CHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhh-CCcccCCCCCcceeeecCCCeeEEecccccccccCCCCCCCCCCc
Q 043346           26 NLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHA-RKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEM  103 (135)
Q Consensus        26 ~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~~~~~~~~~~~~~  103 (135)
                      +|.+.++. +.++++++++.++.|.+.++.-.-. +.-..+=..|..+++. ..|.+.. .+ ..+.            .
T Consensus        34 SL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~-~dG~V~f-~~-~~s~------------~   98 (229)
T 2yle_A           34 SLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVW-RDGAVTL-AP-AADD------------A   98 (229)
T ss_dssp             EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEE-TTSCEEE-CC-C----------------
T ss_pred             cHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEe-cCCceec-cc-cccc------------c
Confidence            79999986 6799999999999999999877632 1111233445777777 5566554 11 1110            1


Q ss_pred             ccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346          104 VILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus       104 ~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ....+.+||....  ..+.+.-|+|||+++|.
T Consensus        99 ~~~~~~~pe~~~~--~~te~~~IysLG~tLY~  128 (229)
T 2yle_A           99 GEPPPVAGKLGYS--QCMETEVIESLGIIIYK  128 (229)
T ss_dssp             --------CCSSS--SSCHHHHHHHHHHHHHH
T ss_pred             cccCCCChhhccc--cchHHHHHHHHHHHHHH
Confidence            1224567877642  24567789999999983

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=97.37  E-value=0.001  Score=44.06  Aligned_cols=32  Identities=28%  Similarity=0.427  Sum_probs=23.8

Q ss_pred             CCcccCCCCCcceeeec---CCCeeEEecccccccc
Q 043346           59 RKIIHRDLTTMNLLADI---ENKTVKIAADSGMAKE   91 (135)
Q Consensus        59 ~~i~h~dl~~~nil~~~---~~~~~~i~~d~~~~~~   91 (135)
                      ..++|+|+++.|++++.   +.....+ +||+.+..
T Consensus       190 ~~~~HgD~~~~N~l~~~~~~~~~~~~~-iD~~~a~~  224 (306)
T 3tdw_A          190 PRLIHGDLSPDHFLTNLNSRQTPLTGI-IDFGDAAI  224 (306)
T ss_dssp             CEEECSCCSGGGEEECTTCSSCCEEEE-CCCTTCEE
T ss_pred             CeeEeCCCCcccEEEecCCCCCceEEE-EehhhcCC
Confidence            35799999999999984   1334456 79987653

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=97.23  E-value=0.0017  Score=41.96  Aligned_cols=30  Identities=30%  Similarity=0.375  Sum_probs=23.2

Q ss_pred             CcccCCCCCcceeeecCCCeeEEecccccccc
Q 043346           60 KIIHRDLTTMNLLADIENKTVKIAADSGMAKE   91 (135)
Q Consensus        60 ~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~   91 (135)
                      .++|+|+.+.|++++ +.+..-+ +||+.+..
T Consensus       194 ~l~HGDl~~~Nil~~-~~~~~~v-iDwe~a~~  223 (272)
T 4gkh_A          194 VVTHGDFSLDNLIFD-EGKLIGC-IDVGRVGI  223 (272)
T ss_dssp             EEECSCCCTTSEEEE-TTEEEEE-CCCTTCEE
T ss_pred             EEEcCCCCCCeEEEE-CCeEEEE-EECccccc
Confidence            378999999999998 5454556 69987753

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=96.20  E-value=0.0094  Score=39.59  Aligned_cols=30  Identities=27%  Similarity=0.334  Sum_probs=24.6

Q ss_pred             CCcccCCCCCcceeeecCCCeeEEeccccccc
Q 043346           59 RKIIHRDLTTMNLLADIENKTVKIAADSGMAK   90 (135)
Q Consensus        59 ~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~   90 (135)
                      ..++|+|+.+.|++++ ..+.+.+ +||+.+.
T Consensus       222 ~~l~HgD~~~~Nil~~-~~~~~~l-IDfe~a~  251 (346)
T 2q83_A          222 PNLCHQDYGTGNTLLG-ENEQIWV-IDLDTVS  251 (346)
T ss_dssp             CCEECSSCSTTSEEEC-GGGCEEE-CCCTTCE
T ss_pred             CceecCCCCcccEEEe-CCCcEEE-Eehhhcc
Confidence            6799999999999997 3456677 7998774

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=95.30  E-value=0.028  Score=38.84  Aligned_cols=32  Identities=22%  Similarity=0.394  Sum_probs=25.8

Q ss_pred             hhCCcccCCCCCcceeeecCCCeeEEecccccccc
Q 043346           57 HARKIIHRDLTTMNLLADIENKTVKIAADSGMAKE   91 (135)
Q Consensus        57 h~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~   91 (135)
                      +...++|+|+++.||+++ ..+ +.+ +||+.+..
T Consensus       230 ~~~~liHGDl~~~Nil~~-~~~-~~l-ID~e~a~~  261 (420)
T 2pyw_A          230 RAQALIHGDLHTGSVMVT-QDS-TQV-IDPEFSFY  261 (420)
T ss_dssp             BCCEEECSCCSGGGEEEC-SSC-EEE-CCCTTCEE
T ss_pred             CCCeEEecCCCCCcEEEe-CCC-CEE-EeCccccc
Confidence            457899999999999998 434 777 79987753

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=93.63  E-value=0.071  Score=35.78  Aligned_cols=31  Identities=19%  Similarity=0.204  Sum_probs=24.6

Q ss_pred             hCCcccCCCCCcceeeecCCCeeEEeccccccc
Q 043346           58 ARKIIHRDLTTMNLLADIENKTVKIAADSGMAK   90 (135)
Q Consensus        58 ~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~   90 (135)
                      ...++|+|+.+.||+++ +.+.+.+ +||+.+.
T Consensus       221 ~~~l~HgDl~~~Nil~~-~~~~~~v-IDwe~a~  251 (357)
T 3ats_A          221 EPVLLWGDARVGNVLYR-DFQPVAV-LDWEMVA  251 (357)
T ss_dssp             CCEEECSSCSGGGEEEE-TTEEEEE-CCGGGCE
T ss_pred             CceEEeCCCCCCeEEEe-CCcEEEE-Ecccccc
Confidence            35799999999999998 5444566 7998775

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=93.35  E-value=0.042  Score=36.31  Aligned_cols=30  Identities=23%  Similarity=0.179  Sum_probs=23.5

Q ss_pred             CCcccCCCCCcceeeecCCCeeEEeccccccc
Q 043346           59 RKIIHRDLTTMNLLADIENKTVKIAADSGMAK   90 (135)
Q Consensus        59 ~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~   90 (135)
                      .+++|+|+.+.|++++ +++...+ +||+.+.
T Consensus       187 ~~liHgDl~~~Nil~~-~~~~~~l-IDf~~a~  216 (322)
T 2ppq_A          187 AGVIHADLFQDNVFFL-GDELSGL-IDFYFAC  216 (322)
T ss_dssp             EEEECSCCCGGGEEEE-TTEEEEE-CCCTTCE
T ss_pred             cccCCCCCCccCEEEe-CCceEEE-ecchhcc
Confidence            4789999999999998 4444456 6998764

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=93.14  E-value=0.099  Score=34.75  Aligned_cols=33  Identities=33%  Similarity=0.244  Sum_probs=25.3

Q ss_pred             hCCcccCCCCCcceeeecC---CCeeEEecccccccc
Q 043346           58 ARKIIHRDLTTMNLLADIE---NKTVKIAADSGMAKE   91 (135)
Q Consensus        58 ~~~i~h~dl~~~nil~~~~---~~~~~i~~d~~~~~~   91 (135)
                      ...++|+|+.+.|++++.+   .+.+.+ +||+.+..
T Consensus       182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~l-IDf~~a~~  217 (333)
T 3csv_A          182 DMVFVHRDFHAQNLLWLPEREGLARVGV-IDFQDAKL  217 (333)
T ss_dssp             CCEEECSCCSGGGEEECTTSCGGGGEEE-CCCTTCEE
T ss_pred             CCeeEeCCcCcccEEeccCcCCCCCeEE-EeCCCcCc
Confidence            3579999999999999832   145667 79987764

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=92.86  E-value=0.19  Score=33.21  Aligned_cols=30  Identities=20%  Similarity=0.155  Sum_probs=23.7

Q ss_pred             hCCcccCCCCCcceeeecCCCeeEEecccccccc
Q 043346           58 ARKIIHRDLTTMNLLADIENKTVKIAADSGMAKE   91 (135)
Q Consensus        58 ~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~   91 (135)
                      ...++|+|+++.||+++ +  .+.+ +||+.+..
T Consensus       194 ~~~l~HgD~~~~Nil~~-~--~~~l-IDfe~a~~  223 (328)
T 1zyl_A          194 TVLRLHGDCHAGNILWR-D--GPMF-VDLDDARN  223 (328)
T ss_dssp             CCEECCSSCSGGGEEES-S--SEEE-CCCTTCCE
T ss_pred             CeeeeeCCCCcccEeEc-C--CCEE-EECCCCCc
Confidence            35689999999999998 4  5666 69987653

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=91.03  E-value=0.29  Score=32.79  Aligned_cols=31  Identities=19%  Similarity=0.243  Sum_probs=24.6

Q ss_pred             CCcccCCCCCcceeeecCCCeeEEecccccccc
Q 043346           59 RKIIHRDLTTMNLLADIENKTVKIAADSGMAKE   91 (135)
Q Consensus        59 ~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~   91 (135)
                      ..++|+|+.+.|++++ ..+.+.+ +||+.+..
T Consensus       206 ~~~~HgD~~~~N~l~~-~~~~~~~-iD~e~~~~  236 (339)
T 3i1a_A          206 YVLCHSDIHAGNVLVG-NEESIYI-IDWDEPML  236 (339)
T ss_dssp             CEEECSCCCGGGEEEC-GGGCEEE-CCCSSCEE
T ss_pred             ceeEeCCCCcCCEEEe-CCCeEEE-EECCCCee
Confidence            4789999999999998 4455677 69977653

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=89.32  E-value=0.2  Score=33.88  Aligned_cols=29  Identities=17%  Similarity=0.276  Sum_probs=22.4

Q ss_pred             CCcccCCCCCcceeeecCCCeeEEeccccccc
Q 043346           59 RKIIHRDLTTMNLLADIENKTVKIAADSGMAK   90 (135)
Q Consensus        59 ~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~   90 (135)
                      ..++|+|+.+.||+++ +++ +.+ +||..+.
T Consensus       212 ~~l~HgDl~~~Nil~~-~~~-~~l-ID~e~a~  240 (369)
T 3c5i_A          212 IVFCHNDLQENNIINT-NKC-LRL-IDFEYSG  240 (369)
T ss_dssp             EEEECSCCCGGGEEEC-C-C-EEE-CCCTTCE
T ss_pred             eEEEeCCCCcccEEec-CCc-EEE-EEecCCC
Confidence            4689999999999987 333 667 7997664

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=88.98  E-value=0.72  Score=31.40  Aligned_cols=30  Identities=37%  Similarity=0.511  Sum_probs=23.8

Q ss_pred             hCCcccCCCCCcceeeecCCCeeEEeccccccc
Q 043346           58 ARKIIHRDLTTMNLLADIENKTVKIAADSGMAK   90 (135)
Q Consensus        58 ~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~   90 (135)
                      ...++|+|+.+.||+++ .. .+.+ +||..+.
T Consensus       226 ~~~L~HGDl~~~Nil~~-~~-~~~l-ID~e~a~  255 (397)
T 2olc_A          226 AETLIHGDLHTGSIFAS-EH-ETKV-IDPEFAF  255 (397)
T ss_dssp             CCEEECSCCSGGGEEEC-SS-CEEE-CCCTTCE
T ss_pred             CCceeeCCCCcCcEEEe-CC-CeEE-EeCcccc
Confidence            46899999999999998 33 3667 6997665

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=88.06  E-value=0.31  Score=31.89  Aligned_cols=30  Identities=20%  Similarity=0.106  Sum_probs=22.9

Q ss_pred             CCcccCCCCCcceeeecCCCeeEEecccccccc
Q 043346           59 RKIIHRDLTTMNLLADIENKTVKIAADSGMAKE   91 (135)
Q Consensus        59 ~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~   91 (135)
                      ..++|+|+.+.|++.  ..+.+.+ +||..+..
T Consensus       173 ~~l~HgDl~~~Nil~--~~~~~~l-ID~e~a~~  202 (301)
T 3dxq_A          173 LAACHCDPLCENFLD--TGERMWI-VDWEYSGM  202 (301)
T ss_dssp             CEEECSCCCGGGEEE--CSSCEEE-CCCTTCEE
T ss_pred             ceeeccCCCcCCEEE--CCCCEEE-EecccccC
Confidence            358999999999994  3455677 79987753

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=86.99  E-value=0.33  Score=33.76  Aligned_cols=16  Identities=31%  Similarity=0.376  Sum_probs=14.6

Q ss_pred             CcccCCCCCcceeeec
Q 043346           60 KIIHRDLTTMNLLADI   75 (135)
Q Consensus        60 ~i~h~dl~~~nil~~~   75 (135)
                      .++|+|+.+.||++..
T Consensus       250 v~~H~Dl~~gNiL~~~  265 (429)
T 1nw1_A          250 TFCHNDLQEGNILLPK  265 (429)
T ss_dssp             EEECSCCCGGGEEEEC
T ss_pred             EEEeCCCCCCeEEeeC
Confidence            6899999999999984

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=85.69  E-value=0.56  Score=32.18  Aligned_cols=32  Identities=19%  Similarity=0.189  Sum_probs=24.6

Q ss_pred             CCcccCCCCCcceeeecC---CCeeEEecccccccc
Q 043346           59 RKIIHRDLTTMNLLADIE---NKTVKIAADSGMAKE   91 (135)
Q Consensus        59 ~~i~h~dl~~~nil~~~~---~~~~~i~~d~~~~~~   91 (135)
                      ..++|+|+.+.||+++.+   .+.+.+ +||..+..
T Consensus       220 ~~~~H~D~~~~Nil~~~~~~~~~~~~~-IDwE~a~~  254 (379)
T 3feg_A          220 VVFCHNDIQEGNILLLSEPENADSLML-VDFEYSSY  254 (379)
T ss_dssp             EEEECSCCCGGGEEEESCC---CCEEE-CCCTTCEE
T ss_pred             cEEEcCCCCCCeEEEcCCCCccCcEEE-EecccCCc
Confidence            368999999999999843   256677 79987753

>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}

Probab=84.61  E-value=2.2  Score=27.00  Aligned_cols=53  Identities=8%  Similarity=-0.003  Sum_probs=40.1

Q ss_pred             CCCHHHHHHHHHHHHHHHH-HHhhCCcccCCCCCcceeeecCCCeeEEeccccccccc
Q 043346           36 PMDSHLIKKFLYCILSGIS-YCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEI   92 (135)
Q Consensus        36 ~~~~~~~~~~~~~i~~~l~-~lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~~   92 (135)
                      ..+....++++.+++.... +++  .-++.-+.|+|++++ .++.+++ ...|+...+
T Consensus        81 ~~~~~eKlrll~nl~~L~~~~~~--~r~tf~l~P~NL~f~-~~~~p~i-~hRGi~~~l  134 (219)
T 4ano_A           81 KTTLLSRIRAAIHLVSKVKHHSA--RRLIFIVCPENLMFN-RALEPFF-LHVGVKESL  134 (219)
T ss_dssp             TSCHHHHHHHHHHHHHHHSSCCS--SSEECCCCGGGEEEC-TTCCEEE-SCCEETTTB
T ss_pred             hcCHHHHHHHHHHHHHHHHHhhh--CceeEEEeCceEEEe-CCCcEEE-EEcCCcccC
Confidence            4677888888888877655 443  346788999999999 7788898 688875544

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=84.39  E-value=0.64  Score=32.72  Aligned_cols=16  Identities=25%  Similarity=0.376  Sum_probs=14.4

Q ss_pred             CCcccCCCCCcceeee
Q 043346           59 RKIIHRDLTTMNLLAD   74 (135)
Q Consensus        59 ~~i~h~dl~~~nil~~   74 (135)
                      ..++|+|+.+.||+++
T Consensus       290 ~v~cHnDl~~gNIL~~  305 (458)
T 2qg7_A          290 IVLCHCDLLSSNIINT  305 (458)
T ss_dssp             EEEECSCCCGGGEEEC
T ss_pred             eeEEecCCCCCcEEee
Confidence            3688999999999997

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=83.94  E-value=0.7  Score=31.75  Aligned_cols=31  Identities=19%  Similarity=0.159  Sum_probs=23.5

Q ss_pred             CcccCCCCCcceeeec-----CCCeeEEecccccccc
Q 043346           60 KIIHRDLTTMNLLADI-----ENKTVKIAADSGMAKE   91 (135)
Q Consensus        60 ~i~h~dl~~~nil~~~-----~~~~~~i~~d~~~~~~   91 (135)
                      .++|+|+.+.||++..     +.+.+.+ +||..+..
T Consensus       245 vfcHnDl~~gNil~~~~~~~~~~~~l~v-IDwEya~~  280 (401)
T 3g15_A          245 VFCHNDCQEGNILLLEGRENSEKQKLML-IDFEYSSY  280 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSCCEEE-CCCTTCEE
T ss_pred             eeEEecCCCCeEEEecCcccCcCCeEEE-echHhccC
Confidence            3679999999999942     3456777 79987753

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	135
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	1e-17
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	5e-17
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	2e-15
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	2e-15
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	6e-15
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	6e-15
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	9e-15
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	3e-14
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	3e-14
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	3e-14
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	4e-14
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	4e-14
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	6e-14
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	7e-14
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	8e-14
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	1e-13
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	2e-13
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	6e-13
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	7e-13
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	1e-12
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	3e-12
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	3e-12
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	3e-12
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	9e-12
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	1e-11
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	1e-11
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	1e-11
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	2e-11
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	4e-11
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	6e-11
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	7e-11
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	1e-10
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	1e-10
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	1e-10
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	2e-10
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	3e-10
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	1e-09
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	1e-09
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	1e-09
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	2e-09
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	3e-09
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	3e-09
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	3e-09
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	3e-09
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	4e-09
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	5e-09
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	5e-09
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	1e-08
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	1e-08
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	2e-08
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	2e-08
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	4e-08
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	9e-08
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	2e-07
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	2e-07
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	2e-07
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	3e-07
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	5e-07
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	7e-07
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	1e-05
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	2e-05
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	3e-05
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	4e-05

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.3 bits (182), Expect = 1e-17
 Identities = 25/122 (20%), Positives = 51/122 (41%), Gaps = 8/122 (6%)

Query: 18  LVFEYVNINLHKFI--QQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           ++ E+        +  +   P+    I+      L  ++Y H  KIIHRDL   N+L   
Sbjct: 86  ILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFT- 144

Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCF----AAIDMWAVLY 131
            +  +K+ AD G++ +         + +    + AP+++   T+         D+W++  
Sbjct: 145 LDGDIKL-ADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGI 203

Query: 132 LL 133
            L
Sbjct: 204 TL 205

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.7 bits (178), Expect = 5e-17
 Identities = 33/119 (27%), Positives = 52/119 (43%), Gaps = 5/119 (4%)

Query: 18  LVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           L  EY     L   I+    M     ++F + +++G+ Y H   I HRD+   NLL D E
Sbjct: 80  LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD-E 138

Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVI--LRYRAPKILFGRTNCFAAIDMWAVLYLL 133
              +KI +D G+A              +   L Y AP++L  R      +D+W+   +L
Sbjct: 139 RDNLKI-SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 196

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.5 bits (167), Expect = 2e-15
 Identities = 29/122 (23%), Positives = 57/122 (46%), Gaps = 11/122 (9%)

Query: 18  LVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARK--IIHRDLTTMNLLAD 74
           LV E + +  L  +++++  M   +++ +   IL G+ + H R   IIHRDL   N+   
Sbjct: 89  LVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT 148

Query: 75  IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWA---VLY 131
               +VKI  D G+A    A F      +    + AP++   + +   ++D++A    + 
Sbjct: 149 GPTGSVKI-GDLGLATLKRASF--AKAVIGTPEFMAPEMYEEKYD--ESVDVYAFGMCML 203

Query: 132 LL 133
            +
Sbjct: 204 EM 205

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 68.9 bits (168), Expect = 2e-15
 Identities = 22/119 (18%), Positives = 52/119 (43%), Gaps = 6/119 (5%)

Query: 18  LVFEYV-NINLHKFI-QQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMN-LLAD 74
           +++E++    L + +  +++ M      +++  +  G+ + H    +H DL   N +   
Sbjct: 100 MIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTT 159

Query: 75  IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
             +  +K+  D G+   +D P  +         + AP++  G+   +   DMW+V  L 
Sbjct: 160 KRSNELKL-IDFGLTAHLD-PKQSVKVTTGTAEFAAPEVAEGKPVGYYT-DMWSVGVLS 215

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.9 bits (163), Expect = 6e-15
 Identities = 27/131 (20%), Positives = 54/131 (41%), Gaps = 16/131 (12%)

Query: 18  LVFEYV-NINLHKFIQQY----HPMDSHLIKKFLYCILSGISYCHAR-----KIIHRDLT 67
           +V EY    +L   I +       +D   + + +  +   +  CH R      ++HRDL 
Sbjct: 82  IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLK 141

Query: 68  TMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMW 127
             N+  D   + VK+  D G+A+ ++         +    Y +P+ +   +    + D+W
Sbjct: 142 PANVFLD-GKQNVKL-GDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKS-DIW 198

Query: 128 A---VLYLLRW 135
           +   +LY L  
Sbjct: 199 SLGCLLYELCA 209

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.4 bits (164), Expect = 6e-15
 Identities = 21/114 (18%), Positives = 55/114 (48%), Gaps = 7/114 (6%)

Query: 18  LVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHAR-KIIHRDLTTMNLLADI 75
           +  E++   +L + +++   +   ++ K    ++ G++Y   + KI+HRD+   N+L + 
Sbjct: 81  ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVN- 139

Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
               +K+  D G++ ++        + +    Y +P+ L G      + D+W++
Sbjct: 140 SRGEIKL-CDFGVSGQLID--SMANSFVGTRSYMSPERLQGTHYSVQS-DIWSM 189

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.6 bits (162), Expect = 9e-15
 Identities = 24/112 (21%), Positives = 49/112 (43%), Gaps = 3/112 (2%)

Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           +V EY+       +     MD   I       L  + + H+ ++IHRD+ + N+L    +
Sbjct: 94  VVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG-MD 152

Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            +VK+  D G   +I       +T +    + AP+++  +       D+W++
Sbjct: 153 GSVKL-TDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKV-DIWSL 202

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.4 bits (159), Expect = 3e-14
 Identities = 31/125 (24%), Positives = 55/125 (44%), Gaps = 11/125 (8%)

Query: 18  LVFEYV-NINLHKFIQQYH-PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           +V ++    +L+  +       +   +         G+ Y HA+ IIHRDL + N+    
Sbjct: 80  IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH- 138

Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVI--LRYRAPKILFGRTNCF--AAIDMWA--- 128
           E+ TVKI  D G+A        +H  E +   + + AP+++  +         D++A   
Sbjct: 139 EDLTVKI-GDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGI 197

Query: 129 VLYLL 133
           VLY L
Sbjct: 198 VLYEL 202

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.6 bits (159), Expect = 3e-14
 Identities = 38/136 (27%), Positives = 67/136 (49%), Gaps = 6/136 (4%)

Query: 3   EMMKSMSLWVHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKII 62
           +++++ ++   K   LV   +  +L+K ++    + +  I  FLY IL G+ Y H+  ++
Sbjct: 73  DIIRAPTIEQMKDVYLVTHLMGADLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVL 131

Query: 63  HRDLTTMNLLADIENKTVKIAADSGMAKEIDAP---FDAHTTEMVILRYRAPKILFGRTN 119
           HRDL   NLL +     +KI  D G+A+  D         T  +    YRAP+I+     
Sbjct: 132 HRDLKPSNLLLN-TTCDLKI-CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 189

Query: 120 CFAAIDMWAVLYLLRW 135
              +ID+W+V  +L  
Sbjct: 190 YTKSIDIWSVGCILAE 205

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 65.5 bits (159), Expect = 3e-14
 Identities = 24/118 (20%), Positives = 50/118 (42%), Gaps = 4/118 (3%)

Query: 18  LVFEYV-NINLHKFI-QQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           L+ E++    L   I  + + M    +  ++     G+ + H   I+H D+   N++ + 
Sbjct: 103 LILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCET 162

Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
           +  +     D G+A +++ P +          + AP+I+      F   DMWA+  L 
Sbjct: 163 KKASSVKIIDFGLATKLN-PDEIVKVTTATAEFAAPEIVDREPVGFYT-DMWAIGVLG 218

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.6 bits (157), Expect = 4e-14
 Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 6/113 (5%)

Query: 18  LVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           L+ EY     +++ +Q+    D      ++  + + +SYCH++++IHRD+   NLL    
Sbjct: 83  LILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG-S 141

Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
              +KI AD G +    +     TT    L Y  P+++ GR +     D+W++
Sbjct: 142 AGELKI-ADFGWSVHAPS--SRRTTLCGTLDYLPPEMIEGRMHDEKV-DLWSL 190

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.7 bits (157), Expect = 4e-14
 Identities = 25/118 (21%), Positives = 48/118 (40%), Gaps = 5/118 (4%)

Query: 18  LVFEYVNIN--LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           L+ E       L  FI +   +   L + F + +L  + +CH   ++HRD+   N+L D+
Sbjct: 86  LILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL 145

Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
               +K+  D G    +      +T       Y  P+ +        +  +W++  LL
Sbjct: 146 NRGELKL-IDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILL 200

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.5 bits (156), Expect = 6e-14
 Identities = 42/118 (35%), Positives = 71/118 (60%), Gaps = 4/118 (3%)

Query: 18  LVFEYVNINLHKFI--QQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           LVFE+++ +L KF+       +   LIK +L+ +L G+++CH+ +++HRDL   NLL + 
Sbjct: 78  LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLIN- 136

Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
               +K+ AD G+A+    P   +T E+V L YRAP+IL G      A+D+W++  + 
Sbjct: 137 TEGAIKL-ADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIF 193

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 63.9 bits (155), Expect = 7e-14
 Identities = 29/122 (23%), Positives = 54/122 (44%), Gaps = 9/122 (7%)

Query: 18  LVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           LVF+ +    L  ++ +   +     +K +  +L  I   H   I+HRDL   N+L D +
Sbjct: 87  LVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD-D 145

Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCF-----AAIDMWAVLY 131
           +  +K+  D G + ++D P +          Y AP+I+    N         +DMW+   
Sbjct: 146 DMNIKL-TDFGFSCQLD-PGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGV 203

Query: 132 LL 133
           ++
Sbjct: 204 IM 205

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.4 bits (156), Expect = 8e-14
 Identities = 34/121 (28%), Positives = 66/121 (54%), Gaps = 6/121 (4%)

Query: 17  NLVFEYVNINLHKFIQQY----HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLL 72
           NLV +YV   +++  + Y      +    +K ++Y +   ++Y H+  I HRD+   NLL
Sbjct: 95  NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 154

Query: 73  ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYL 132
            D +   +K+  D G AK++    + + + +    YRAP+++FG T+  ++ID+W+   +
Sbjct: 155 LDPDTAVLKL-CDFGSAKQLVRG-EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCV 212

Query: 133 L 133
           L
Sbjct: 213 L 213

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.9 bits (155), Expect = 1e-13
 Identities = 31/119 (26%), Positives = 58/119 (48%), Gaps = 6/119 (5%)

Query: 18  LVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
               Y  N  L K+I++    D    + +   I+S + Y H + IIHRDL   N+L + E
Sbjct: 85  FGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-E 143

Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVI--LRYRAPKILFGRTNCFAAIDMWAVLYLL 133
           +  ++I  D G AK +            +   +Y +P++L  ++ C ++ D+WA+  ++
Sbjct: 144 DMHIQI-TDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSS-DLWALGCII 200

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.1 bits (153), Expect = 2e-13
 Identities = 19/115 (16%), Positives = 48/115 (41%), Gaps = 6/115 (5%)

Query: 18  LVFEYV-NINLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMN-LLAD 74
           ++FE++  +++ + I      ++   I  +++ +   + + H+  I H D+   N +   
Sbjct: 78  MIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQT 137

Query: 75  IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             + T+KI  + G A+++    +          Y          +   A DMW++
Sbjct: 138 RRSSTIKI-IEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVS--TATDMWSL 189

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 62.1 bits (150), Expect = 6e-13
 Identities = 25/117 (21%), Positives = 56/117 (47%), Gaps = 5/117 (4%)

Query: 18  LVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
            + + +   +LH  + Q+       ++ +   I+ G+ + H R +++RDL   N+L D E
Sbjct: 84  FILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD-E 142

Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
           +  V+I +D G+A +        +  +    Y AP++L       ++ D +++  +L
Sbjct: 143 HGHVRI-SDLGLACDFSKKKPHAS--VGTHGYMAPEVLQKGVAYDSSADWFSLGCML 196

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.4 bits (148), Expect = 7e-13
 Identities = 45/117 (38%), Positives = 65/117 (55%), Gaps = 3/117 (2%)

Query: 18  LVFEYVNINLHKFI-QQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           LVF+++  +L   I      +    IK ++   L G+ Y H   I+HRDL   NLL D E
Sbjct: 77  LVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLD-E 135

Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
           N  +K+ AD G+AK   +P  A+T ++V   YRAP++LFG       +DMWAV  +L
Sbjct: 136 NGVLKL-ADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCIL 191

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 60.8 bits (147), Expect = 1e-12
 Identities = 27/114 (23%), Positives = 44/114 (38%), Gaps = 9/114 (7%)

Query: 18  LVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           LV EY              P+    I    +  L G++Y H+  +IHRD+   N+L   E
Sbjct: 92  LVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS-E 150

Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFA--AIDMWA 128
              VK+  D G A  +        T      + AP+++           +D+W+
Sbjct: 151 PGLVKL-GDFGSASIMAPANSFVGT----PYWMAPEVILAMDEGQYDGKVDVWS 199

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.1 bits (145), Expect = 3e-12
 Identities = 29/120 (24%), Positives = 45/120 (37%), Gaps = 6/120 (5%)

Query: 18  LVFEYV-NINLHKFIQQY--HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMN-LLA 73
           +V E +    L   IQ             + +  I   I Y H+  I HRD+   N L  
Sbjct: 86  IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 145

Query: 74  DIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
                 +    D G AKE     ++ TT      Y AP++L       +  DMW++  ++
Sbjct: 146 SKRPNAILKLTDFGFAKETT-SHNSLTTPCYTPYYVAPEVLGPEKYDKSC-DMWSLGVIM 203

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.1 bits (145), Expect = 3e-12
 Identities = 37/117 (31%), Positives = 55/117 (47%), Gaps = 4/117 (3%)

Query: 18  LVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
            V EY+   +L   IQ  H  D      +   I+ G+ + H++ I++RDL   N+L D +
Sbjct: 80  FVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLD-K 138

Query: 77  NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
           +  +KI AD GM KE         T      Y AP+IL G+    +  D W+   LL
Sbjct: 139 DGHIKI-ADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSV-DWWSFGVLL 193

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 59.5 bits (143), Expect = 3e-12
 Identities = 45/120 (37%), Positives = 64/120 (53%), Gaps = 3/120 (2%)

Query: 11  WVHKRENLVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTM 69
              KR  LVFE++              ++S   K FL  +L+GI+YCH R+++HRDL   
Sbjct: 70  HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQ 129

Query: 70  NLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
           NLL +     +KI AD G+A+    P   +T E+V L YRAP +L G       ID+W+V
Sbjct: 130 NLLIN-REGELKI-ADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSV 187

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.1 bits (140), Expect = 9e-12
 Identities = 25/115 (21%), Positives = 49/115 (42%), Gaps = 9/115 (7%)

Query: 18  LVFEYV-NINLHKFIQQ--YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
           +V EY+   +L  +++      +    + KF   +   + Y      +HRDL   N+L  
Sbjct: 78  IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVS 137

Query: 75  IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            E+   K+ +D G+ KE         T  + +++ AP+ L  +       D+W+ 
Sbjct: 138 -EDNVAKV-SDFGLTKEAS---STQDTGKLPVKWTAPEALREK-KFSTKSDVWSF 186

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 58.5 bits (141), Expect = 1e-11
 Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 6/115 (5%)

Query: 18  LVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLL--AD 74
           L+ + V    L   I +          + ++ +L  + Y H   I+HRDL   NLL  + 
Sbjct: 84  LIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSL 143

Query: 75  IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
            E+  + I +D G++K  D P    +T      Y AP++L  +     A+D W++
Sbjct: 144 DEDSKIMI-SDFGLSKMED-PGSVLSTACGTPGYVAPEVLAQK-PYSKAVDCWSI 195

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 58.3 bits (140), Expect = 1e-11
 Identities = 34/122 (27%), Positives = 65/122 (53%), Gaps = 4/122 (3%)

Query: 12  VHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNL 71
           V +   LVFE+VN     F Q Y  +  + I+ ++Y IL  + YCH+  I+HRD+   N+
Sbjct: 103 VSRTPALVFEHVNNTD--FKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNV 160

Query: 72  LADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLY 131
           + D E++ +++  D G+A+    P   +   +    ++ P++L        ++DMW++  
Sbjct: 161 MIDHEHRKLRL-IDWGLAEFYH-PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGC 218

Query: 132 LL 133
           +L
Sbjct: 219 ML 220

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.0 bits (139), Expect = 1e-11
 Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 7/121 (5%)

Query: 18  LVFEYVNINLHKF-IQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           LVF++   +L               IK+ +  +L+G+ Y H  KI+HRD+   N+L    
Sbjct: 94  LVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT-R 152

Query: 77  NKTVKIAADSGMAKEIDAP----FDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYL 132
           +  +K+ AD G+A+          + +T  +V L YR P++L G  +    ID+W    +
Sbjct: 153 DGVLKL-ADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCI 211

Query: 133 L 133
           +
Sbjct: 212 M 212

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.0 bits (137), Expect = 2e-11
 Identities = 28/121 (23%), Positives = 54/121 (44%), Gaps = 8/121 (6%)

Query: 18  LVFEYV-NINLHKFI-QQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           LV E      LHKF+  +   +    + + L+ +  G+ Y   +  +HRDL   N+L  +
Sbjct: 85  LVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVL--L 142

Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVI---LRYRAPKILFGRTNCFAAIDMWAVLYL 132
            N+     +D G++K + A    +T        L++ AP+ +  R     + D+W+    
Sbjct: 143 VNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRS-DVWSYGVT 201

Query: 133 L 133
           +
Sbjct: 202 M 202

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.6 bits (136), Expect = 4e-11
 Identities = 29/120 (24%), Positives = 51/120 (42%), Gaps = 7/120 (5%)

Query: 18  LVFEYV---NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
           +V EY+   ++      +    +    +      I SG++Y      +HRDL   N+L  
Sbjct: 88  IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG 147

Query: 75  IENKTVKIAADSGMAKEI-DAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
            EN   K+ AD G+A+ I D  + A       +++ AP+          + D+W+   LL
Sbjct: 148 -ENLVCKV-ADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS-DVWSFGILL 204

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.9 bits (134), Expect = 6e-11
 Identities = 27/125 (21%), Positives = 55/125 (44%), Gaps = 7/125 (5%)

Query: 13  HKRENLVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNL 71
            +   LV E      L+K++QQ   +    I + ++ +  G+ Y      +HRDL   N+
Sbjct: 79  AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNV 138

Query: 72  LADIENKTVKIAADSGMAKEIDAPFDAHTTEMVI---LRYRAPKILFGRTNCFAAIDMWA 128
           L        KI +D G++K + A  + +  +      +++ AP+ +        + D+W+
Sbjct: 139 LLV-TQHYAKI-SDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKS-DVWS 195

Query: 129 VLYLL 133
              L+
Sbjct: 196 FGVLM 200

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.7 bits (133), Expect = 7e-11
 Identities = 40/122 (32%), Positives = 63/122 (51%), Gaps = 3/122 (2%)

Query: 13  HKRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNL 71
            K+  LVFE+ +      F      +D  ++K FL+ +L G+ +CH+R ++HRDL   NL
Sbjct: 73  DKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNL 132

Query: 72  LADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLY 131
           L  I        A+ G+A+    P   ++ E+V L YR P +LFG      +IDMW+   
Sbjct: 133 L--INRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGC 190

Query: 132 LL 133
           + 
Sbjct: 191 IF 192

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.6 bits (133), Expect = 1e-10
 Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 5/123 (4%)

Query: 13  HKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLL 72
            K      EY N    +  +  + +    +  F Y +  G+ +   +  +HRDL   N+L
Sbjct: 137 EKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVL 196

Query: 73  ADIENKTVKIAADSGMAKEI--DAPFDAHTTEMVILRYRAPKILF-GRTNCFAAIDMWAV 129
                K VKI  D G+A++I  D+ +       + +++ AP+ LF G     + +  + +
Sbjct: 197 VT-HGKVVKI-CDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGI 254

Query: 130 LYL 132
           L  
Sbjct: 255 LLW 257

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.0 bits (132), Expect = 1e-10
 Identities = 26/120 (21%), Positives = 49/120 (40%), Gaps = 7/120 (5%)

Query: 18  LVFEYVNINL---HKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD 74
           ++ EY+                +  + +      I  G+++   R  IHRDL   N+L  
Sbjct: 84  IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL-- 141

Query: 75  IENKTVKIAADSGMAKEI-DAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
           + +      AD G+A+ I D  + A       +++ AP+ +   T    + D+W+   LL
Sbjct: 142 VSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS-DVWSFGILL 200

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.2 bits (132), Expect = 1e-10
 Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 6/118 (5%)

Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV  ++       + ++  +    I+  +Y +L G+ Y HA  IIHRDL   NL  +   
Sbjct: 100 LVMPFMG-TDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVN--E 156

Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW 135
                  D G+A++ D+     T  +V   YRAP+++         +D+W+V  ++  
Sbjct: 157 DCELKILDFGLARQADSE---MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAE 211

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 54.8 bits (131), Expect = 2e-10
 Identities = 25/125 (20%), Positives = 45/125 (36%), Gaps = 10/125 (8%)

Query: 18  LVFEYVNINLHKFIQQYH-PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           +V E +  +L               +      ++S I Y H++  IHRD+   N L  + 
Sbjct: 80  MVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLG 139

Query: 77  NKTVKI-AADSGMAKEID-------APFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWA 128
            K   +   D G+AK+          P+  +       RY +     G        D+ +
Sbjct: 140 KKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRD-DLES 198

Query: 129 VLYLL 133
           + Y+L
Sbjct: 199 LGYVL 203

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 54.0 bits (129), Expect = 3e-10
 Identities = 20/118 (16%), Positives = 45/118 (38%), Gaps = 3/118 (2%)

Query: 18  LVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMN-LLADI 75
           +V EYV  + L   +    PM      + +      +++ H   IIHRD+   N +++  
Sbjct: 88  IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT 147

Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
               V     +    +           +   +Y +P+   G +    + D++++  +L
Sbjct: 148 NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARS-DVYSLGCVL 204

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 52.8 bits (126), Expect = 1e-09
 Identities = 27/112 (24%), Positives = 51/112 (45%), Gaps = 7/112 (6%)

Query: 19  VFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           + +Y+    L   +++     + + K +   +   + Y H++ II+RDL   N+L D +N
Sbjct: 82  IMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLD-KN 140

Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
             +KI  D G AK +    D   T      Y AP+++  +    +  D W+ 
Sbjct: 141 GHIKI-TDFGFAKYVP---DVTYTLCGTPDYIAPEVVSTKPYNKSI-DWWSF 187

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 52.5 bits (125), Expect = 1e-09
 Identities = 20/128 (15%), Positives = 40/128 (31%), Gaps = 14/128 (10%)

Query: 18  LVFEYVNINLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           LV + +  +L   +           +      +L+ +   H + +++RD+   N L    
Sbjct: 78  LVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRP 137

Query: 77  ----NKTVKIAADSGMAKEIDAPFDAHTTEMVI-------LRYRAPKILFGRTNCFAAID 125
                  + +  D GM K    P                  RY +     GR       D
Sbjct: 138 NSKNANMIYV-VDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRD-D 195

Query: 126 MWAVLYLL 133
           + A+ ++ 
Sbjct: 196 LEALGHVF 203

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.1 bits (124), Expect = 1e-09
 Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 5/119 (4%)

Query: 18  LVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE 76
           L+ E V    L  F+ +   +      +FL  IL+G+ Y H+ +I H DL   N++    
Sbjct: 90  LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDR 149

Query: 77  NKTVKIA--ADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
           N         D G+A +ID   +          + AP+I+        A DMW++  + 
Sbjct: 150 NVPKPRIKIIDFGLAHKIDFG-NEFKNIFGTPEFVAPEIVNYEPLGLEA-DMWSIGVIT 206

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.7 bits (123), Expect = 2e-09
 Identities = 31/131 (23%), Positives = 54/131 (41%), Gaps = 5/131 (3%)

Query: 3   EMMKSMSLWVHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKII 62
           E     +L    R++ V E  +            + S  +  F   +  G+ Y   ++ I
Sbjct: 91  EYAPHGNLLDFLRKSRVLE-TDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFI 149

Query: 63  HRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFA 122
           HRDL   N+L   EN   KI AD G+++  +  +   T   + +R+ A + L        
Sbjct: 150 HRDLAARNILVG-ENYVAKI-ADFGLSRGQE-VYVKKTMGRLPVRWMAIESLNYSVYTTN 206

Query: 123 AIDMWAVLYLL 133
           + D+W+   LL
Sbjct: 207 S-DVWSYGVLL 216

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.7 bits (123), Expect = 3e-09
 Identities = 25/108 (23%), Positives = 47/108 (43%), Gaps = 3/108 (2%)

Query: 26  NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAAD 85
            L   + +         + +   I+S + Y H+R +++RD+   NL+ D ++  +KI  D
Sbjct: 91  ELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD-KDGHIKI-TD 148

Query: 86  SGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
            G+ KE  +      T      Y AP++L       A  D W +  ++
Sbjct: 149 FGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAV-DWWGLGVVM 195

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 51.4 bits (122), Expect = 3e-09
 Identities = 30/118 (25%), Positives = 51/118 (43%), Gaps = 5/118 (4%)

Query: 13  HKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLL 72
           H   +L    ++           P+           + +G++Y   RK +HRDL T N L
Sbjct: 113 HTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCL 172

Query: 73  ADIENKTVKIAADSGMAKEI--DAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWA 128
              EN  VKI AD G+++ I     + A   + + +R+  P+ +F       + D+WA
Sbjct: 173 VG-ENMVVKI-ADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTES-DVWA 227

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 51.3 bits (122), Expect = 3e-09
 Identities = 24/123 (19%), Positives = 51/123 (41%), Gaps = 10/123 (8%)

Query: 18  LVFEYVNINLHKFI--QQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           ++ E++          Q         +   L  I +G+ Y      +HRDL   N+L + 
Sbjct: 104 IITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVN- 162

Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVI-----LRYRAPKILFGRTNCFAAIDMWAVL 130
            N   K+ +D G+++ ++      T    +     +R+ AP+ +  R    +A D+W+  
Sbjct: 163 SNLVCKV-SDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYR-KFTSASDVWSYG 220

Query: 131 YLL 133
            ++
Sbjct: 221 IVM 223

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.8 bits (121), Expect = 3e-09
 Identities = 25/119 (21%), Positives = 50/119 (42%), Gaps = 6/119 (5%)

Query: 18  LVFEYVNIN--LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           LVFE++           Q     +  +      +  G++Y     +IHRDL   N L   
Sbjct: 77  LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG- 135

Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVI-LRYRAPKILFGRTNCFAAIDMWAVLYLL 133
           EN+ +K+ +D GM + +       +T     +++ +P++         + D+W+   L+
Sbjct: 136 ENQVIKV-SDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS-DVWSFGVLM 192

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.0 bits (121), Expect = 4e-09
 Identities = 28/125 (22%), Positives = 54/125 (43%), Gaps = 5/125 (4%)

Query: 11  WVHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMN 70
                +  +  ++       I +   +    ++  +Y IL G+ Y H+  IIHRDL   N
Sbjct: 92  LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN 151

Query: 71  LLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVL 130
           L  + + +   +  D G+A+  D      T  +    YRAP+I+    +    +D+W+V 
Sbjct: 152 LAVNEDCELKIL--DFGLARHTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 206

Query: 131 YLLRW 135
            ++  
Sbjct: 207 CIMAE 211

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.0 bits (121), Expect = 5e-09
 Identities = 23/128 (17%), Positives = 48/128 (37%), Gaps = 5/128 (3%)

Query: 3   EMMKSMSLWVH-KRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKI 61
           E      L    +R+   F     +          +D   +  F Y +  G+++  ++  
Sbjct: 107 EYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC 166

Query: 62  IHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVI--LRYRAPKILFGRTN 119
           IHRDL   N+L  + +  +    D G+A++I    +          +++ AP+ +F    
Sbjct: 167 IHRDLAARNIL--LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVY 224

Query: 120 CFAAIDMW 127
            F +    
Sbjct: 225 TFESDVWS 232

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.6 bits (120), Expect = 5e-09
 Identities = 30/121 (24%), Positives = 59/121 (48%), Gaps = 6/121 (4%)

Query: 15  RENLVFEYVNINLHKFIQQYH--PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLL 72
           +  LVFE+V+ +L  ++ +     + +  IK  ++ +L G+ + H+ +++HRDL   N+L
Sbjct: 89  KLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNIL 148

Query: 73  ADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYL 132
                +             I +   A T+ +V L YRAP++L   +      D+W+V  +
Sbjct: 149 VTSSGQIKLADFGLAR---IYSFQMALTSVVVTLWYRAPEVLLQSSYATPV-DLWSVGCI 204

Query: 133 L 133
            
Sbjct: 205 F 205

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.4 bits (117), Expect = 1e-08
 Identities = 25/116 (21%), Positives = 51/116 (43%), Gaps = 8/116 (6%)

Query: 18  LVFEYVN--INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           ++ EY+          ++        +   L  I +G+ Y      +HRDL   N+L + 
Sbjct: 86  IITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVN- 144

Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVI---LRYRAPKILFGRTNCFAAIDMWA 128
            N   K+ +D G+++ ++   +A  T       +R+ AP+ +  R    A+ D+W+
Sbjct: 145 SNLVCKV-SDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSAS-DVWS 198

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.4 bits (117), Expect = 1e-08
 Identities = 26/129 (20%), Positives = 52/129 (40%), Gaps = 8/129 (6%)

Query: 11  WVHKRENLVFEYVNIN--LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTT 68
            +     L+ + +     L    +    + S  +  +   I  G++Y   R+++HRDL  
Sbjct: 80  CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAA 139

Query: 69  MNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVI--LRYRAPKILFGR--TNCFAAI 124
            N+L     + VKI  D G+AK + A    +  E     +++ A + +  R  T+     
Sbjct: 140 RNVLVK-TPQHVKI-TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVW 197

Query: 125 DMWAVLYLL 133
                ++ L
Sbjct: 198 SYGVTVWEL 206

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 49.4 bits (117), Expect = 2e-08
 Identities = 23/126 (18%), Positives = 42/126 (33%), Gaps = 6/126 (4%)

Query: 4   MMKSMSLWVHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIH 63
            ++           ++       +   +++         + +   I+    Y H+  +I+
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 164

Query: 64  RDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAA 123
           RDL   NLL D +        D G AK          T        AP+I+  +    A 
Sbjct: 165 RDLKPENLLIDQQGYI--QVTDFGFAKR---VKGRTWTLCGTPEALAPEIILSKGYNKAV 219

Query: 124 IDMWAV 129
            D WA+
Sbjct: 220 -DWWAL 224

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.6 bits (115), Expect = 2e-08
 Identities = 25/128 (19%), Positives = 47/128 (36%), Gaps = 8/128 (6%)

Query: 11  WVHKRENLVFEYVNIN--LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTT 68
            +     +V E   +   L +  +         + ++   +  G+ Y  +++ IHRDL  
Sbjct: 80  VLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAA 139

Query: 69  MNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVI---LRYRAPKILFGRTNCFAAID 125
            NLL    +       D G+ + +    D +  +        + AP+ L  RT   A+ D
Sbjct: 140 RNLLLATRDLVKIG--DFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHAS-D 196

Query: 126 MWAVLYLL 133
            W     L
Sbjct: 197 TWMFGVTL 204

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.2 bits (114), Expect = 4e-08
 Identities = 26/122 (21%), Positives = 51/122 (41%), Gaps = 9/122 (7%)

Query: 18  LVFEYVNINLHKFIQQY--HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           +V  Y+     +   +   H      +  F   +  G+ +  ++K +HRDL   N + D 
Sbjct: 106 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLD- 164

Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVI----LRYRAPKILFGRTNCFAAIDMWAVLY 131
           E  TVK+ AD G+A+++                 +++ A + L  +     + D+W+   
Sbjct: 165 EKFTVKV-ADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKS-DVWSFGV 222

Query: 132 LL 133
           LL
Sbjct: 223 LL 224

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.1 bits (111), Expect = 9e-08
 Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 16/115 (13%)

Query: 18  LVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHA--------RKIIHRDLTT 68
           LV +Y  + +L  ++ + + +    + K      SG+++ H           I HRDL +
Sbjct: 78  LVSDYHEHGSLFDYLNR-YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKS 136

Query: 69  MNLLADIENKTVKIAADSGMAKEIDAPFD----AHTTEMVILRYRAPKILFGRTN 119
            N+L   +N T  I AD G+A   D+  D    A    +   RY AP++L    N
Sbjct: 137 KNILVK-KNGTCCI-ADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSIN 189

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.2 bits (109), Expect = 2e-07
 Identities = 23/119 (19%), Positives = 54/119 (45%), Gaps = 6/119 (5%)

Query: 18  LVFEYV-NINLHKFIQ-QYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           ++ EY+ N  L  +++   H   +  + +    +   + Y  +++ +HRDL   N L + 
Sbjct: 76  IITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVN- 134

Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVI-LRYRAPKILFGRTNCFAAIDMWAVLYLL 133
           +   VK+ +D G+++ +       +      +R+  P++L        + D+WA   L+
Sbjct: 135 DQGVVKV-SDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS-DIWAFGVLM 191

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.4 bits (109), Expect = 2e-07
 Identities = 24/106 (22%), Positives = 44/106 (41%), Gaps = 4/106 (3%)

Query: 26  NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAAD 85
            L   + Q      H ++ ++  I+  + + H   II+RD+   N+L D  N  V +  D
Sbjct: 115 ELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLD-SNGHVVL-TD 172

Query: 86  SGMAKEIDAPFDAHTTEM--VILRYRAPKILFGRTNCFAAIDMWAV 129
            G++KE  A       +    I       +  G +    A+D W++
Sbjct: 173 FGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSL 218

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.9 bits (108), Expect = 2e-07
 Identities = 17/118 (14%), Positives = 47/118 (39%), Gaps = 4/118 (3%)

Query: 18  LVFEYVNIN--LHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI 75
           ++ E   +         + + +D   +  + Y + + ++Y  +++ +HRD+   N+L   
Sbjct: 84  IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS- 142

Query: 76  ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
            N  VK+  D G+++ ++       ++  +                +A D+W     +
Sbjct: 143 SNDCVKL-GDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM 199

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.6 bits (107), Expect = 3e-07
 Identities = 30/125 (24%), Positives = 52/125 (41%), Gaps = 5/125 (4%)

Query: 1   MQEMMKSMSLWVHKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARK 60
           + E  K  +L  + R     E+V   +         +    +  + + +  G+ +  +RK
Sbjct: 96  IVEFCKFGNLSTYLRSKR-NEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK 154

Query: 61  IIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVI--LRYRAPKILFGRT 118
            IHRDL   N+L   E   VKI  D G+A++I    D          L++ AP+ +F R 
Sbjct: 155 CIHRDLAARNILLS-EKNVVKI-CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV 212

Query: 119 NCFAA 123
               +
Sbjct: 213 YTIQS 217

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.1 bits (106), Expect = 5e-07
 Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 3/91 (3%)

Query: 28  HKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSG 87
           +        + + ++      I S + Y   +  IHRDL   N L   EN  VK+ AD G
Sbjct: 103 YLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG-ENHLVKV-ADFG 160

Query: 88  MAKEIDA-PFDAHTTEMVILRYRAPKILFGR 117
           +++ +    + AH      +++ AP+ L   
Sbjct: 161 LSRLMTGDTYTAHAGAKFPIKWTAPESLAYN 191

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.5 bits (104), Expect = 7e-07
 Identities = 29/133 (21%), Positives = 51/133 (38%), Gaps = 18/133 (13%)

Query: 18  LVFEYV-NINLHKFIQQYHP----------------MDSHLIKKFLYCILSGISYCHARK 60
           ++ EY    NL +++Q   P                + S  +    Y +  G+ Y  ++K
Sbjct: 96  VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK 155

Query: 61  IIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNC 120
            IHRDL   N+L   +N                  +   T   + +++ AP+ LF R   
Sbjct: 156 CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 215

Query: 121 FAAIDMWAVLYLL 133
             + D+W+   LL
Sbjct: 216 HQS-DVWSFGVLL 227

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.2 bits (95), Expect = 1e-05
 Identities = 22/109 (20%), Positives = 43/109 (39%), Gaps = 3/109 (2%)

Query: 27  LHKFIQQYHPMDSHLIKKFLYCILSGISYCH-ARKIIHRDLTTMNLLADIENKTVKIA-A 84
                 ++  +    +K+    +L G+ Y H    IIH D+   N+L +I +    +   
Sbjct: 112 ALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQI 171

Query: 85  DSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLL 133
                       + +T  +    YR+P++L G      A D+W+   L+
Sbjct: 172 KIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGA-DIWSTACLI 219

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.7 bits (94), Expect = 2e-05
 Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 6/112 (5%)

Query: 18  LVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN 77
           LV E ++ NL + IQ     +   +   LY +L GI + H+  IIHRDL   N    +++
Sbjct: 99  LVMELMDANLCQVIQMELDHE--RMSYLLYQMLCGIKHLHSAGIIHRDLKPSN--IVVKS 154

Query: 78  KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAV 129
                  D G+A+         T  +V   YRAP+++ G       +D+W+V
Sbjct: 155 DCTLKILDFGLARTAGTS-FMMTPYVVTRYYRAPEVILGM-GYKENVDIWSV 204

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 39.8 bits (92), Expect = 3e-05
 Identities = 13/77 (16%), Positives = 30/77 (38%), Gaps = 3/77 (3%)

Query: 19  VFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK 78
                 +      ++ + +      + L  IL  ++  + R I+H DL+  N+L  +  +
Sbjct: 82  WEGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVL--VSEE 139

Query: 79  TVKIAADSGMAKEIDAP 95
            + I  D   + E+   
Sbjct: 140 GIWI-IDFPQSVEVGEE 155

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.5 bits (91), Expect = 4e-05
 Identities = 29/129 (22%), Positives = 53/129 (41%), Gaps = 16/129 (12%)

Query: 18  LVFEYV-NINLHKFIQQYH----------PMDSHLIKKFLYCILSGISYCHARKIIHRDL 66
           ++ E +   +L  +++             P     + +    I  G++Y +A K +HRDL
Sbjct: 100 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDL 159

Query: 67  TTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVIL--RYRAPKILFGRTNCFAAI 124
              N +   E+ TVKI  D GM ++I            +L  R+ +P+ L          
Sbjct: 160 AARNCMVA-EDFTVKI-GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTT-YS 216

Query: 125 DMWAVLYLL 133
           D+W+   +L
Sbjct: 217 DVWSFGVVL 225

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	135
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.98
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.98
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.98
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.98
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.97
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.97
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.97
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.97
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.97
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.97
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.97
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.97
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.97
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.97
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.97
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.96
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.92
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.53
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	95.08
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	93.45
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	92.76
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	91.88
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	89.04

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.2e-39  Score=208.54  Aligned_cols=129  Identities=25%  Similarity=0.439  Sum_probs=114.5

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      +||+++++++.++ ..|+||||++ |+|.+++.+.+.+++..+..++.|++.|++|||++|++||||||+||+++ ..+.
T Consensus        66 pnIv~~~~~~~~~~~~~ivmEy~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~-~~~~  144 (263)
T d2j4za1          66 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG-SAGE  144 (263)
T ss_dssp             TTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC-TTSC
T ss_pred             CCCCeEEEEEEECCEEEEEEeecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceec-CCCC
Confidence            5899999998655 8899999995 69999999888999999999999999999999999999999999999999 6688


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +|+ +|||++......  ......||+.|+|||++.+.+ ++.++|+||+||++|.
T Consensus       145 ~kl-~DFG~a~~~~~~--~~~~~~Gt~~Y~APE~~~~~~-~~~~~DiwSlGvilye  196 (263)
T d2j4za1         145 LKI-ADFGWSVHAPSS--RRTTLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYE  196 (263)
T ss_dssp             EEE-CCCCSCSCCCCC--CCEETTEEGGGCCHHHHTTCC-CCTTHHHHHHHHHHHH
T ss_pred             Eee-cccceeeecCCC--cccccCCCCcccCHHHHcCCC-CCchhhhhhHhHHHHH
Confidence            999 899999766443  234567999999999998876 6889999999999983

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.7e-39  Score=210.33  Aligned_cols=129  Identities=19%  Similarity=0.346  Sum_probs=114.7

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .||+++++++..+ ..|+||||++ |+|.+++.+ +.+++..+..++.|++.|++|||++|++||||||+||+++ ..+.
T Consensus        77 pnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~-~~~~  154 (293)
T d1yhwa1          77 PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG-MDGS  154 (293)
T ss_dssp             TTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC-TTCC
T ss_pred             CCEeeEeEEEEECCEEEEEEEecCCCcHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEEC-CCCc
Confidence            4889999988554 8899999995 699988776 5799999999999999999999999999999999999999 6688


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +|+ +|||+++.............||+.|+|||++.+.+ ++.++|+||+||++|
T Consensus       155 vkl-~DFG~a~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~~DiwSlGvily  207 (293)
T d1yhwa1         155 VKL-TDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKA-YGPKVDIWSLGIMAI  207 (293)
T ss_dssp             EEE-CCCTTCEECCSTTCCBCCCCSCGGGCCHHHHSSSC-BCTHHHHHHHHHHHH
T ss_pred             Eee-ccchhheeeccccccccccccCCCccChhhhcCCC-CCchhceehHhHHHH
Confidence            999 89999998766555566778999999999998876 688999999999998

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-38  Score=212.99  Aligned_cols=131  Identities=23%  Similarity=0.274  Sum_probs=117.8

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .||+++++.+.++ ..|+||||++ |+|.+++.+++.+++..+..++.|++.|++|||++|++||||||+||+++ ..+.
T Consensus        65 p~Iv~l~~~~~~~~~~~iv~ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~-~~g~  143 (337)
T d1o6la_          65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD-KDGH  143 (337)
T ss_dssp             TTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC-TTSC
T ss_pred             CCEEEEEeeeccccccccceeccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEec-CCCC
Confidence            4788998888655 8899999995 69999999989999999999999999999999999999999999999999 6689


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +|+ +|||+++............+||+.|+|||++.+.. ++.++|+||+||++|.
T Consensus       144 vkl-~DFG~a~~~~~~~~~~~~~~GT~~Y~aPE~~~~~~-y~~~~DiwSlGvilye  197 (337)
T d1o6la_         144 IKI-TDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDND-YGRAVDWWGLGVVMYE  197 (337)
T ss_dssp             EEE-CCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSSC-BCTTHHHHHHHHHHHH
T ss_pred             EEE-eecccccccccCCcccccceeCHHHhhhhhccCCC-CChhhcccchhhHHHH
Confidence            999 89999987766555666789999999999998877 6889999999999983

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-39  Score=212.78  Aligned_cols=131  Identities=26%  Similarity=0.348  Sum_probs=115.1

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      +||+++++++.++ ..|+||||++ |+|.+++.+++.+++..+..++.|++.|++|||++|++||||||+||+++ ..+.
T Consensus        63 pnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~-~~~~  141 (271)
T d1nvra_          63 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDN  141 (271)
T ss_dssp             TTBCCEEEEEEETTEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC-TTCC
T ss_pred             CCEeeEeeeeccCceeEEEEeccCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEEC-CCCC
Confidence            5899999998665 7889999996 59999998888899999999999999999999999999999999999999 6688


Q ss_pred             eEEecccccccccCCC--CCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAP--FDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~--~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +|+ +|||+++.....  .......+||+.|+|||++.+....+.++|+||+||++|
T Consensus       142 ~KL-~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvily  197 (271)
T d1nvra_         142 LKI-SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT  197 (271)
T ss_dssp             EEE-CCCTTCEECEETTEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHH
T ss_pred             EEE-ccchhheeeccCCccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHH
Confidence            999 899999876433  223456789999999999988775677899999999998

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-38  Score=207.63  Aligned_cols=131  Identities=23%  Similarity=0.379  Sum_probs=112.1

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .||+++++.+.++ ..|+||||++ |+|.+++...+.+++..+..++.|++.|++|||+++++||||||+||+++ ..+.
T Consensus        68 pnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~-~~~~  146 (288)
T d1uu3a_          68 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMH  146 (288)
T ss_dssp             TTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-TTSC
T ss_pred             CCeeEEEEEEEECCEEEEEEEccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccC-CCce
Confidence            4789998888555 8899999996 59999999889999999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCC--CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPF--DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||+++......  .......||+.|+|||++.+.. ++.++|+||+||++|.
T Consensus       147 vkl-~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~-~~~~~DiwSlGvilye  202 (288)
T d1uu3a_         147 IQI-TDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKS-ACKSSDLWALGCIIYQ  202 (288)
T ss_dssp             EEE-CCCTTCEECC----------CCCCGGGCCHHHHHTCC-CCHHHHHHHHHHHHHH
T ss_pred             EEe-cccccceecccCCcccccccccCCccccCceeeccCC-CCcccceehhhHHHHH
Confidence            999 8999998765332  2344568999999999998876 7889999999999983

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.1e-37  Score=206.52  Aligned_cols=130  Identities=22%  Similarity=0.331  Sum_probs=102.3

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeec--CC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI--EN   77 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~--~~   77 (135)
                      +||+++++++.++ ..|+||||++ ++|.+++.+.+.+++..+..++.|++.|++|||+++++||||||+||++..  ++
T Consensus        67 pnIv~l~~~~~~~~~~~lvmE~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~  146 (307)
T d1a06a_          67 PNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDED  146 (307)
T ss_dssp             TTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTT
T ss_pred             CCCCcEEEEEEECCEEEEEEeccCCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCC
Confidence            4899999988555 8899999995 699999998889999999999999999999999999999999999999963  45


Q ss_pred             CeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           78 KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +.+|+ +|||+++..... .......||+.|+|||++.+.. ++.++|+||+||++|
T Consensus       147 ~~vkl-~DFG~a~~~~~~-~~~~~~~GT~~y~APE~~~~~~-~~~~~DiwSlGvily  200 (307)
T d1a06a_         147 SKIMI-SDFGLSKMEDPG-SVLSTACGTPGYVAPEVLAQKP-YSKAVDCWSIGVIAY  200 (307)
T ss_dssp             CCEEE-CCC-------------------CTTSCHHHHTTCC-CCTHHHHHHHHHHHH
T ss_pred             ceEEE-eccceeEEccCC-CeeeeeeeCccccCcHHHcCCC-CCcHHHhhhhhHHHH
Confidence            78999 899999866443 3345568999999999998876 788999999999998

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-38  Score=210.75  Aligned_cols=128  Identities=17%  Similarity=0.340  Sum_probs=111.7

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhh-CCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHA-RKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~~~nil~~~~~~   78 (135)
                      +||+++++++.++ +.|+||||+. |+|.+++.+++.+++..+..++.|++.|+.|||+ ++|+||||||+||+++ ..+
T Consensus        64 pnIv~l~~~~~~~~~~~iVmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~-~~~  142 (322)
T d1s9ja_          64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVN-SRG  142 (322)
T ss_dssp             TTBCCEEEEEECSSEEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEEC-TTC
T ss_pred             CCCCcEEEEEEECCEEEEEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeEC-CCC
Confidence            4899999988655 8999999996 5999999988899999999999999999999997 4999999999999999 678


Q ss_pred             eeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           79 TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .+|+ +|||++......  .....+||+.|+|||++.+.. ++.++|+||+||++|
T Consensus       143 ~vkl-~DFGla~~~~~~--~~~~~~GT~~Y~APEvl~~~~-y~~~~DiWSlGvil~  194 (322)
T d1s9ja_         143 EIKL-CDFGVSGQLIDS--MANSFVGTRSYMSPERLQGTH-YSVQSDIWSMGLSLV  194 (322)
T ss_dssp             CEEE-CCCCCCHHHHHH--TC---CCSSCCCCHHHHHCSC-CCTTHHHHHHHHHHH
T ss_pred             CEEE-eeCCCccccCCC--ccccccCCccccCchHHcCCC-CCcHHHHHHHHHHHH
Confidence            8999 899999865432  234568999999999999876 788999999999997

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.5e-37  Score=200.38  Aligned_cols=129  Identities=23%  Similarity=0.363  Sum_probs=111.2

Q ss_pred             ccchhhhcccee-----cceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCC--cccCCCCCcceee
Q 043346            2 QEMMKSMSLWVH-----KRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARK--IIHRDLTTMNLLA   73 (135)
Q Consensus         2 ~~~~~~~~~~~~-----~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~--i~h~dl~~~nil~   73 (135)
                      +||+++++++..     ...|+||||++ ++|.+++.+++.+++..+..++.|++.|++|||+++  |+||||||+||++
T Consensus        68 pnIv~~~~~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl  147 (270)
T d1t4ha_          68 PNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFI  147 (270)
T ss_dssp             TTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEE
T ss_pred             CCeeeEEEEEeeccccCCEEEEEEeCCCCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhcee
Confidence            478999888743     35789999995 699999998889999999999999999999999998  9999999999999


Q ss_pred             ecCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           74 DIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        74 ~~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +..++.+|+ +|||+++.....  ......||+.|+|||++.+.  ++.++|+||+||++|.
T Consensus       148 ~~~~~~~Kl-~DFGla~~~~~~--~~~~~~GT~~Y~aPE~~~~~--~~~~~DIwSlGvilye  204 (270)
T d1t4ha_         148 TGPTGSVKI-GDLGLATLKRAS--FAKAVIGTPEFMAPEMYEEK--YDESVDVYAFGMCMLE  204 (270)
T ss_dssp             SSTTSCEEE-CCTTGGGGCCTT--SBEESCSSCCCCCGGGGGTC--CCTHHHHHHHHHHHHH
T ss_pred             eCCCCCEEE-eecCcceeccCC--ccCCcccCccccCHHHhCCC--CCCcCchhhHHHHHHH
Confidence            756788999 899999754332  33456899999999999764  7889999999999983

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.5e-38  Score=206.38  Aligned_cols=131  Identities=19%  Similarity=0.301  Sum_probs=111.6

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      +||+++++.+.++ ..|+||||+. |+|.+++.+ .+++++..+..++.|++.|+.|||++||+||||||+||+++ .++
T Consensus        69 pnIv~l~~~~~~~~~~~lvmEy~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~-~~~  147 (288)
T d2jfla1          69 PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFT-LDG  147 (288)
T ss_dssp             TTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC-TTS
T ss_pred             CCCCeEEEEEeeCCeEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeEC-CCC
Confidence            5899999988554 8899999995 599999875 45799999999999999999999999999999999999999 678


Q ss_pred             eeEEecccccccccCCCCCCCCCCcccccccCcccccC----CCCCCchhHHHHhhhhhh
Q 043346           79 TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFG----RTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~----~~~~~~~~D~wslg~il~  134 (135)
                      .+|+ +|||++..............||+.|+|||++.+    ...++.++|+||+||++|
T Consensus       148 ~~Kl-~DFG~a~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvily  206 (288)
T d2jfla1         148 DIKL-ADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLI  206 (288)
T ss_dssp             CEEE-CCCTTCEECHHHHHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHH
T ss_pred             CEEE-EechhhhccCCCcccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHH
Confidence            8999 899999765443333456789999999999843    233678999999999997

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.7e-37  Score=204.08  Aligned_cols=130  Identities=30%  Similarity=0.384  Sum_probs=117.5

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .||++.++.+.++ ..|+||||++ |+|.+++..++.+++..+..++.|++.|++|||+++++||||||+||+++ ..+.
T Consensus        63 p~Iv~~~~~~~~~~~~yivmEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~-~~~~  141 (320)
T d1xjda_          63 PFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLD-KDGH  141 (320)
T ss_dssp             TTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC-TTSC
T ss_pred             CcEEEEEEEEccCCceeEEEeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeec-CCCc
Confidence            4789999888655 7999999995 69999999988999999999999999999999999999999999999999 7788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +++ +|||+++.............||+.|+|||++.+.. ++.++|+||+||++|
T Consensus       142 ~kl-~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlGvily  194 (320)
T d1xjda_         142 IKI-ADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQK-YNHSVDWWSFGVLLY  194 (320)
T ss_dssp             EEE-CCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCC-BCTHHHHHHHHHHHH
T ss_pred             eec-cccchhhhcccccccccccCCCCCcCCHHHHcCCC-CCchhhhhhhhHHHH
Confidence            999 89999987766555666778999999999998877 788999999999998

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.8e-38  Score=203.68  Aligned_cols=130  Identities=20%  Similarity=0.364  Sum_probs=101.1

Q ss_pred             ccchhhhcccee---cceeEEEeccC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhhCC-----cccCCCCC
Q 043346            2 QEMMKSMSLWVH---KRENLVFEYVN-INLHKFIQQ----YHPMDSHLIKKFLYCILSGISYCHARK-----IIHRDLTT   68 (135)
Q Consensus         2 ~~~~~~~~~~~~---~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lh~~~-----i~h~dl~~   68 (135)
                      +||+++++++.+   +..|+||||++ |+|.+++.+    ++.+++..+..++.|++.|++|||+++     |+||||||
T Consensus        63 pnIv~~~~~~~~~~~~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp  142 (269)
T d2java1          63 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKP  142 (269)
T ss_dssp             TTBCCEEEEEEC----CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCG
T ss_pred             CCEeeEEEEEEeCCCCEEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCch
Confidence            588999988743   36799999995 599999864    457999999999999999999999976     99999999


Q ss_pred             cceeeecCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           69 MNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        69 ~nil~~~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +||+++ ..+.+|+ +|||+++.............||+.|+|||++.+.. ++.++|+|||||++|
T Consensus       143 ~NIll~-~~~~vkl-~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~-~~~~~DIwSlGvily  205 (269)
T d2java1         143 ANVFLD-GKQNVKL-GDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMS-YNEKSDIWSLGCLLY  205 (269)
T ss_dssp             GGEEEC-TTSCEEE-CCHHHHHHC-----------CCCSCCCHHHHTTCC-CCHHHHHHHHHHHHH
T ss_pred             hhcCcC-CCCcEEE-eeccceeecccCCCccccCCCCcccCCHHHHcCCC-CChHHHHHhhCHHHH
Confidence            999999 6788999 89999998766555566778999999999997766 789999999999998

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=4.6e-37  Score=207.60  Aligned_cols=130  Identities=20%  Similarity=0.272  Sum_probs=114.4

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      +||+++++++..+ ..|+||||+. |+|.+++.++..+++..+..++.|++.|+.|||+++++||||||+||+++ ..+.
T Consensus        67 pnIv~l~~~~~~~~~~~ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~-~~g~  145 (364)
T d1omwa3          67 PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD-EHGH  145 (364)
T ss_dssp             TTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC-SSSC
T ss_pred             CcEEEEEEEEEECCEEEEEEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEc-CCCc
Confidence            4788888888554 7899999995 69999999888999999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +|+ +|||+++.....  ......||+.|+|||++.+...++.++|+||+||++|.
T Consensus       146 iKl-~DFGla~~~~~~--~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilye  198 (364)
T d1omwa3         146 VRI-SDLGLACDFSKK--KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK  198 (364)
T ss_dssp             EEE-CCCTTCEECSSS--CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHH
T ss_pred             EEE-eeeceeeecCCC--cccccccccccchhHHhhcCCCCCcccchhHHHHHHHH
Confidence            999 899999876543  33456799999999999766557899999999999983

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-37  Score=202.32  Aligned_cols=131  Identities=21%  Similarity=0.237  Sum_probs=109.1

Q ss_pred             ccchhhhccceecceeEEEeccC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHKRENLVFEYVN-INLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .||++++++..+++.++||||++ |+|.+++.. ++.+++..+..++.|++.||+|||+++++||||||+||+++ .++.
T Consensus        64 pnIv~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~-~~~~  142 (276)
T d1uwha_          64 VNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH-EDLT  142 (276)
T ss_dssp             TTBCCEEEEECSSSCEEEEECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE-TTSS
T ss_pred             CCEeeeeEEEeccEEEEEEecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEc-CCCC
Confidence            58999999988888999999996 699999976 45799999999999999999999999999999999999999 6789


Q ss_pred             eEEecccccccccCCCC--CCCCCCcccccccCcccccCCC--CCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPF--DAHTTEMVILRYRAPKILFGRT--NCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~~--~~~~~~D~wslg~il~  134 (135)
                      +|+ +|||+++......  .......||+.|+|||++.+..  .++.++|+|||||++|
T Consensus       143 ~Kl-~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~  200 (276)
T d1uwha_         143 VKI-GDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLY  200 (276)
T ss_dssp             EEE-CCCCCSCC------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHH
T ss_pred             EEE-ccccceeeccccCCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHH
Confidence            999 8999997664322  2334567899999999996532  3678999999999997

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=6e-37  Score=203.10  Aligned_cols=127  Identities=20%  Similarity=0.311  Sum_probs=110.0

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      +||+++++++.++ ..|+|||||. ++|..+...++++++..+..++.|++.||.|||++|++||||||+||+++ .++.
T Consensus        75 pnIv~~~~~~~~~~~~~iv~E~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~-~~~~  153 (309)
T d1u5ra_          75 PNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS-EPGL  153 (309)
T ss_dssp             TTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEE-TTTE
T ss_pred             CCEeeEEEEEEECCEEEEEEEecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEC-CCCC
Confidence            4899999988655 8899999996 47776667778899999999999999999999999999999999999999 7789


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCC--CCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGR--TNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~--~~~~~~~D~wslg~il~  134 (135)
                      +|+ +|||++.....    .....||+.|+|||++.+.  ..++.++|+||+||++|
T Consensus       154 ~Kl-~DFG~a~~~~~----~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvily  205 (309)
T d1u5ra_         154 VKL-GDFGSASIMAP----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI  205 (309)
T ss_dssp             EEE-CCCTTCBSSSS----BCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHH
T ss_pred             EEE-eecccccccCC----CCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHH
Confidence            999 89999986533    3456799999999999653  33678999999999997

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.2e-36  Score=202.20  Aligned_cols=128  Identities=22%  Similarity=0.346  Sum_probs=113.6

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .||+++++.+.++ ..|+||||+. ++|.+.+.....+++..+..++.|++.|++|||++|++||||||+||+++ .++.
T Consensus        64 pnIv~~~~~~~~~~~~~ivmE~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~-~~g~  142 (316)
T d1fota_          64 PFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLD-KNGH  142 (316)
T ss_dssp             TTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEEC-TTSC
T ss_pred             cChhheeeeEeeCCeeeeEeeecCCccccccccccccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEc-CCCC
Confidence            4789998888555 8899999995 69999999888999999999999999999999999999999999999999 6789


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +|+ +|||+++.....   .....||+.|+|||++.+.+ ++.++|+||+||++|.
T Consensus       143 vkL-~DFG~a~~~~~~---~~~~~Gt~~Y~APE~l~~~~-y~~~~DiwSlGvilye  193 (316)
T d1fota_         143 IKI-TDFGFAKYVPDV---TYTLCGTPDYIAPEVVSTKP-YNKSIDWWSFGILIYE  193 (316)
T ss_dssp             EEE-CCCSSCEECSSC---BCCCCSCTTTCCHHHHTTCC-BCTTHHHHHHHHHHHH
T ss_pred             EEE-ecCccceEeccc---cccccCcccccCHHHHcCCC-CCchhhccccchhHHH
Confidence            999 899999876543   34568999999999998776 6789999999999983

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.9e-37  Score=200.52  Aligned_cols=130  Identities=22%  Similarity=0.324  Sum_probs=113.0

Q ss_pred             ccchhhhccceecceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCee
Q 043346            2 QEMMKSMSLWVHKRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTV   80 (135)
Q Consensus         2 ~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~   80 (135)
                      +||+++++++..+..++||||++ |+|.+++.++..+++..+..++.|++.|++|||+++++||||||+||+++ ..+.+
T Consensus        68 pnIv~~~g~~~~~~~~lvmE~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~-~~~~~  146 (277)
T d1xbba_          68 PYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLV-TQHYA  146 (277)
T ss_dssp             TTBCCEEEEEESSSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE-ETTEE
T ss_pred             CCCceEEEEeccCCEEEEEEcCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhccc-ccCcc
Confidence            58999999987778899999995 69999999988999999999999999999999999999999999999999 67899


Q ss_pred             EEecccccccccCCCCC---CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           81 KIAADSGMAKEIDAPFD---AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        81 ~i~~d~~~~~~~~~~~~---~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ++ +|||+++.......   ......+|+.|+|||++.+.. ++.++|+|||||++|
T Consensus       147 kl-~DFGla~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~-~~~~sDiwS~Gv~l~  201 (277)
T d1xbba_         147 KI-SDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK-FSSKSDVWSFGVLMW  201 (277)
T ss_dssp             EE-CCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCE-EEHHHHHHHHHHHHH
T ss_pred             cc-cchhhhhhccccccccccccccCCCceecCchhhcCCC-CCchhhhccchhhhh
Confidence            99 89999987654322   223457889999999997766 788999999999987

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2e-36  Score=203.58  Aligned_cols=127  Identities=23%  Similarity=0.317  Sum_probs=113.5

Q ss_pred             ccchhhhccceec-ceeEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .||+++++.+.+. ..++|||++ +++|.+++.+.+.+++..+..++.|++.||.|||+++|+||||||+||+++ ..+.
T Consensus       101 pnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~-~~g~  179 (350)
T d1rdqe_         101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGY  179 (350)
T ss_dssp             TTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC-TTSC
T ss_pred             CcEeecccccccccccccccccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccC-CCCC
Confidence            4788888888655 788999999 569999999888999999999999999999999999999999999999999 6688


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +|+ +|||+++.....   .....||+.|+|||++.+.. ++.++|+|||||++|
T Consensus       180 ikL-~DFG~a~~~~~~---~~~~~Gt~~Y~APE~~~~~~-~~~~~DiwSlGvily  229 (350)
T d1rdqe_         180 IQV-TDFGFAKRVKGR---TWTLCGTPEALAPEIILSKG-YNKAVDWWALGVLIY  229 (350)
T ss_dssp             EEE-CCCTTCEECSSC---BCCCEECGGGCCHHHHTTCC-BCTHHHHHHHHHHHH
T ss_pred             EEe-eeceeeeecccc---cccccCccccCCHHHHcCCC-CCccccccchhHHHH
Confidence            999 899999877543   34568999999999998876 788999999999998

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-36  Score=198.11  Aligned_cols=131  Identities=24%  Similarity=0.344  Sum_probs=113.9

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC-
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK-   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~-   78 (135)
                      +||+++++++.++ ..|+|||||+ |+|.+++.+++.+++..+..++.|++.|++|||+++++||||||+||+++..+. 
T Consensus        73 pnIv~~~~~~~~~~~~~iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~  152 (293)
T d1jksa_          73 PNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVP  152 (293)
T ss_dssp             TTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSS
T ss_pred             CCCCcEEEEEEECCEEEEEEEcCCCccccchhccccccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCc
Confidence            4899999988655 7899999995 699999998889999999999999999999999999999999999999984332 


Q ss_pred             --eeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           79 --TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        79 --~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                        .+|+ +|||++...... .......+|+.|+|||++.+.. ++.++|+||+||++|.
T Consensus       153 ~~~vkl-~DfG~a~~~~~~-~~~~~~~~t~~y~APE~~~~~~-~~~~~DiwSlGvilye  208 (293)
T d1jksa_         153 KPRIKI-IDFGLAHKIDFG-NEFKNIFGTPEFVAPEIVNYEP-LGLEADMWSIGVITYI  208 (293)
T ss_dssp             SCCEEE-CCCTTCEECTTS-CBCSCCCCCGGGCCHHHHTTCC-BCTHHHHHHHHHHHHH
T ss_pred             ccceEe-cchhhhhhcCCC-ccccccCCCCcccCHHHHcCCC-CCCcccchhhhHHHHH
Confidence              5899 899999876544 3445567899999999998766 7889999999999983

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-36  Score=200.98  Aligned_cols=131  Identities=36%  Similarity=0.596  Sum_probs=113.9

Q ss_pred             ccchhhhccceec-ceeEEEeccCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNINLHKFIQ-QYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~~L~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .||+++++++..+ +.|+||||+.+++...+. .+..+++..+..++.|++.|++|||++|++||||||+||+++ ..+.
T Consensus        60 pnIv~~~~~~~~~~~~~ivmE~~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~-~~~~  138 (299)
T d1ua2a_          60 PNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLD-ENGV  138 (299)
T ss_dssp             TTBCCEEEEECCTTCCEEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC-TTCC
T ss_pred             CCEeEEEeeeccCCceeehhhhhcchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEec-CCCc
Confidence            4789998888655 899999999775555444 456799999999999999999999999999999999999999 7788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +|+ +|||+++.............+|+.|+|||++.+...++.++|+||+||++|
T Consensus       139 ~KL-~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~  192 (299)
T d1ua2a_         139 LKL-ADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILA  192 (299)
T ss_dssp             EEE-CCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHH
T ss_pred             ccc-ccCccccccCCCcccccceecChhhccHHHHccCCCCChhhhhhhcchHHH
Confidence            999 899999887666556667789999999999987766789999999999997

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=1.3e-36  Score=204.42  Aligned_cols=130  Identities=16%  Similarity=0.309  Sum_probs=112.8

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeec-CC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI-EN   77 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~-~~   77 (135)
                      .||+++++++.++ ..|+||||++ |+|.+++.+ .+.+++..+..++.|++.||+|||++|++||||||+||++.. .+
T Consensus        83 pnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~  162 (350)
T d1koaa2          83 PTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRS  162 (350)
T ss_dssp             TTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTS
T ss_pred             CCCCcEEEEEEECCEEEEEEEcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccCCC
Confidence            4789999988655 8999999995 699999954 567999999999999999999999999999999999999973 35


Q ss_pred             CeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           78 KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +.+|+ +|||+++..... .......||+.|+|||++.+.. ++.++|+||+||++|
T Consensus       163 ~~vkL-~DFG~a~~~~~~-~~~~~~~gT~~Y~aPEv~~~~~-~~~~~DiwSlGvily  216 (350)
T d1koaa2         163 NELKL-IDFGLTAHLDPK-QSVKVTTGTAEFAAPEVAEGKP-VGYYTDMWSVGVLSY  216 (350)
T ss_dssp             CCEEE-CCCTTCEECCTT-SCEEEECSCTTTCCHHHHHTCC-BCHHHHHHHHHHHHH
T ss_pred             CeEEE-eecchheecccc-cccceecCcccccCHHHHcCCC-CChhHhhhhhhHHHH
Confidence            78999 899999876544 3445578899999999998876 688999999999997

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-36  Score=202.58  Aligned_cols=130  Identities=23%  Similarity=0.402  Sum_probs=111.0

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhc-----------------------CCCCHHHHHHHHHHHHHHHHHH
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQY-----------------------HPMDSHLIKKFLYCILSGISYC   56 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~-----------------------~~~~~~~~~~~~~~i~~~l~~l   56 (135)
                      +||+++++++.+. ..|+|||||+ |+|.+++.+.                       ..+++..+..++.|++.|++||
T Consensus       101 pnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yL  180 (325)
T d1rjba_         101 ENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFL  180 (325)
T ss_dssp             TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHH
T ss_pred             CcEeEEEEEEeeCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHH
Confidence            5899999988554 8899999994 7999999753                       2478899999999999999999


Q ss_pred             hhCCcccCCCCCcceeeecCCCeeEEecccccccccCCCCC--CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           57 HARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPFD--AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        57 h~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      |+++|+||||||+||+++ .++.+|+ +|||+++.......  ......+|+.|+|||++.+.. ++.++|+|||||++|
T Consensus       181 H~~~IiHRDlKp~Nill~-~~~~~Kl-~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~-~~~~~DiwS~Gvil~  257 (325)
T d1rjba_         181 EFKSCVHRDLAARNVLVT-HGKVVKI-CDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGI-YTIKSDVWSYGILLW  257 (325)
T ss_dssp             HHTTEEETTCSGGGEEEE-TTTEEEE-CCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCC-CCHHHHHHHHHHHHH
T ss_pred             HhCCeeeccCchhccccc-cCCeEEE-eeccccccccCCCceeeeccccCCCccCChHHHcCCC-CCcceeccchhHHHH
Confidence            999999999999999999 6789999 89999987654322  234556799999999998776 788999999999997

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-36  Score=202.90  Aligned_cols=131  Identities=25%  Similarity=0.346  Sum_probs=112.0

Q ss_pred             ccchhhhcccee-----cceeEEEeccC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceee
Q 043346            2 QEMMKSMSLWVH-----KRENLVFEYVN-INLHKFIQQY--HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLA   73 (135)
Q Consensus         2 ~~~~~~~~~~~~-----~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~   73 (135)
                      +|++++++.+..     ...|+|||||+ |+|.+++.+.  .++++.++..++.|++.|++|||++|++||||||+||++
T Consensus        65 pnIv~l~~~~~~~~~~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll  144 (335)
T d2ozaa1          65 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLY  144 (335)
T ss_dssp             TTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE
T ss_pred             CCCCeEEEEEeecccCCCEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCcccccccccccc
Confidence            478888887743     46899999995 6999999874  468999999999999999999999999999999999999


Q ss_pred             ec--CCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           74 DI--ENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        74 ~~--~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +.  ..+.+|+ +|||+++..... .......||+.|+|||++.+.. ++.++|+||+||++|.
T Consensus       145 ~~~~~~~~~Kl-~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~-y~~~~DiwSlGvily~  205 (335)
T d2ozaa1         145 TSKRPNAILKL-TDFGFAKETTSH-NSLTTPCYTPYYVAPEVLGPEK-YDKSCDMWSLGVIMYI  205 (335)
T ss_dssp             SCSSTTCCEEE-CCCTTCEECCCC-CCCCCCSCCCSSCCCCCCCGGG-GSHHHHHHHHHHHHHH
T ss_pred             ccccccccccc-cccceeeeccCC-CccccccCCcccCCcHHHcCCC-CCHHHHHHhhchhHHH
Confidence            84  2457899 899999876554 3445668999999999998776 7889999999999983

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-36  Score=197.59  Aligned_cols=130  Identities=22%  Similarity=0.324  Sum_probs=113.5

Q ss_pred             ccchhhhccceecceeEEEeccC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHKRENLVFEYVN-INLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      +||+++++++..+..|+||||++ |+|.+++.. ++.+++..+..++.|++.||+|||+++++||||||+||+++ .++.
T Consensus        69 pnIv~l~g~~~~~~~~lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~-~~~~  147 (285)
T d1u59a_          69 PYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLV-NRHY  147 (285)
T ss_dssp             TTBCCEEEEEESSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE-ETTE
T ss_pred             CCEeeEeeeeccCeEEEEEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeec-cCCc
Confidence            48999999988778999999996 599999865 46799999999999999999999999999999999999999 6789


Q ss_pred             eEEecccccccccCCCCC---CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFD---AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~---~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +|+ +|||+++.......   ......+|+.|+|||++.+.. ++.++|+|||||++|
T Consensus       148 ~Kl-~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~ksDVwS~Gv~l~  203 (285)
T d1u59a_         148 AKI-SDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK-FSSRSDVWSYGVTMW  203 (285)
T ss_dssp             EEE-CCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCE-ECHHHHHHHHHHHHH
T ss_pred             eee-ccchhhhcccccccccccccccccCccccChHHHhCCC-CCccchhhcchHHHH
Confidence            999 89999987754322   234556889999999997766 788999999999987

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=1.1e-35  Score=194.47  Aligned_cols=131  Identities=21%  Similarity=0.341  Sum_probs=114.7

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .|+++.++++.++ ..|+||||++ ++|.+++..++.+++..+..++.|++.|++|||++|++||||||+||+++ .++.
T Consensus        70 pnIv~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~-~~~~  148 (277)
T d1phka_          70 PNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD-DDMN  148 (277)
T ss_dssp             TTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-TTCC
T ss_pred             CCeEEEEeecccCcceEEEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEc-CCCC
Confidence            4789999998665 7899999995 69999999889999999999999999999999999999999999999999 7788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccC-----CCCCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFG-----RTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-----~~~~~~~~D~wslg~il~~  135 (135)
                      +|+ +|||++...... .......||+.|+|||.+.+     ...++.++|+||+||++|+
T Consensus       149 ~kl-~DFG~a~~~~~~-~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilye  207 (277)
T d1phka_         149 IKL-TDFGFSCQLDPG-EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYT  207 (277)
T ss_dssp             EEE-CCCTTCEECCTT-CCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHH
T ss_pred             eEE-ccchheeEccCC-CceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhh
Confidence            999 899999877554 33455789999999999853     3336789999999999983

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=3.1e-36  Score=202.71  Aligned_cols=131  Identities=20%  Similarity=0.311  Sum_probs=113.2

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeec-CC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI-EN   77 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~-~~   77 (135)
                      .||+++++++.++ ..|+|||||+ |+|.+++.+. .++++.++..++.|++.|++|||++|++||||||+||+++. ..
T Consensus        86 pnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~  165 (352)
T d1koba_          86 PKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKA  165 (352)
T ss_dssp             TTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTC
T ss_pred             CCCCcEEEEEEECCEEEEEEEcCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccccCC
Confidence            4899999988655 8899999995 6999988764 47999999999999999999999999999999999999973 45


Q ss_pred             CeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           78 KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      +.+++ +|||++...... .......+|+.|+|||++.+.. ++.++|+||+||++|.
T Consensus       166 ~~vkL-~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlGvilye  220 (352)
T d1koba_         166 SSVKI-IDFGLATKLNPD-EIVKVTTATAEFAAPEIVDREP-VGFYTDMWAIGVLGYV  220 (352)
T ss_dssp             CCEEE-CCCTTCEECCTT-SCEEEECSSGGGCCHHHHTTCC-BCHHHHHHHHHHHHHH
T ss_pred             CeEEE-eecccceecCCC-CceeeccCcccccCHHHHcCCC-CCCccchHHHHHHHHH
Confidence            78899 899999877544 3445567899999999998776 7899999999999983

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.1e-36  Score=195.36  Aligned_cols=131  Identities=19%  Similarity=0.323  Sum_probs=113.9

Q ss_pred             ccchhhhccceec-ceeEEEeccC--CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN--INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~--~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      .||+++++++.++ ..++|||++.  +++.+++.+++.+++.++..++.|++.|++|||+++++||||||+||+++.+.+
T Consensus        69 ~nIv~~~~~~~~~~~~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~  148 (273)
T d1xwsa_          69 SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG  148 (273)
T ss_dssp             CSBCCEEEEEECSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTT
T ss_pred             CCccEEEEEEeeCCeEEEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEecCCC
Confidence            4789999988655 8899999994  488999988889999999999999999999999999999999999999996667


Q ss_pred             eeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           79 TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      .+++ +|||++......  ......||+.|+|||++.+....+.++|+||+||++|+
T Consensus       149 ~vkl-~DFG~a~~~~~~--~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilye  202 (273)
T d1xwsa_         149 ELKL-IDFGSGALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD  202 (273)
T ss_dssp             EEEE-CCCTTCEECCSS--CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHH
T ss_pred             eEEE-Cccccceecccc--cccccccCCCcCCHHHHcCCCCCCcccccccceeeehh
Confidence            8999 899999765433  34567899999999999877656778999999999983

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.5e-36  Score=194.00  Aligned_cols=130  Identities=19%  Similarity=0.335  Sum_probs=102.6

Q ss_pred             ccchhhhcccee-cceeEEEecc-CCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVH-KRENLVFEYV-NINLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~-~~~~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      +||+++++++.+ +..++||||+ +|+|.+++... ..++++....++.|++.|++|+|+++++||||||+||+++ .++
T Consensus        60 pnIv~~~g~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~-~~~  138 (263)
T d1sm2a_          60 PKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG-ENQ  138 (263)
T ss_dssp             TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEEC-GGG
T ss_pred             CCcccccceeccCCceEEEEEecCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeec-CCC
Confidence            589999998854 4889999999 57999998764 5688999999999999999999999999999999999999 678


Q ss_pred             eeEEecccccccccCCCCC-CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           79 TVKIAADSGMAKEIDAPFD-AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .+|+ +|||+++....... ......+|+.|+|||++.+.. ++.++|+||+||++|
T Consensus       139 ~~Kl-~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~-~~~k~DVwS~Gvil~  193 (263)
T d1sm2a_         139 VIKV-SDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSR-YSSKSDVWSFGVLMW  193 (263)
T ss_dssp             CEEE-CSCC------------------CTTSCCHHHHTTCC-CCHHHHHHHHHHHHH
T ss_pred             CeEe-cccchheeccCCCceeecceecCcccCChHHhcCCC-CCchhhhcchHHHHH
Confidence            8999 89999987654322 233457889999999998776 788999999999987

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=6.2e-36  Score=197.48  Aligned_cols=130  Identities=19%  Similarity=0.335  Sum_probs=101.9

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      +||+++++++.++ ..++||||++ |+|.+++.. .+.+++.++..++.|++.||.|||+++++||||||+||+++ .++
T Consensus        87 pnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~-~~~  165 (299)
T d1jpaa_          87 PNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVN-SNL  165 (299)
T ss_dssp             TTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC-TTC
T ss_pred             CCCccEEEEEeeCCEEEEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEEC-CCC
Confidence            5899999998554 8899999995 699998887 45789999999999999999999999999999999999999 678


Q ss_pred             eeEEecccccccccCCCCCC-----CCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           79 TVKIAADSGMAKEIDAPFDA-----HTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~-----~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .+|+ +|||+++........     .....+|+.|+|||.+.+.. ++.++|+|||||++|
T Consensus       166 ~~Kl-~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~-~~~~sDvwS~Gvvl~  224 (299)
T d1jpaa_         166 VCKV-SDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRK-FTSASDVWSYGIVMW  224 (299)
T ss_dssp             CEEE-CCC-----------------------CGGGSCHHHHHSCC-CCHHHHHHHHHHHHH
T ss_pred             cEEE-CCcccceEccCCCCcceeeecccccCCccccCHHHHhcCC-CCcccccccchHHHH
Confidence            9999 899999876533221     22345788999999998776 788999999999997

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.8e-36  Score=196.25  Aligned_cols=130  Identities=24%  Similarity=0.371  Sum_probs=113.2

Q ss_pred             ccchhhhccceecceeEEEecc-CCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHKRENLVFEYV-NINLHKFIQQ--YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      +||+++++++.++..++||||+ +|+|.+++..  ..++++..+..++.|++.|+.|||+++++||||||+||+++ +++
T Consensus        68 pnIv~~~g~~~~~~~~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~-~~~  146 (272)
T d1qpca_          68 QRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS-DTL  146 (272)
T ss_dssp             TTBCCEEEEECSSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-TTS
T ss_pred             CCEeEEEeeeccCCeEEEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeee-ccc
Confidence            5899999998888899999999 5799998764  33689999999999999999999999999999999999999 778


Q ss_pred             eeEEecccccccccCCCC-CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           79 TVKIAADSGMAKEIDAPF-DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .+|+ +|||+++...... .......+|+.|+|||++.+.. ++.++|+|||||++|
T Consensus       147 ~~Kl-~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~-~~~~sDvwS~Gvvl~  201 (272)
T d1qpca_         147 SCKI-ADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT-FTIKSDVWSFGILLT  201 (272)
T ss_dssp             CEEE-CCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCE-ECHHHHHHHHHHHHH
T ss_pred             ceee-ccccceEEccCCccccccccCCcccccChHHHhCCC-CCchhhhhhhHHHHH
Confidence            9999 8999998775442 2334567889999999998766 788999999999997

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=8.2e-36  Score=195.92  Aligned_cols=130  Identities=23%  Similarity=0.369  Sum_probs=112.0

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQY--HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN   77 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~   77 (135)
                      +||+++++++.++ ..+++|||++ |+|.+++.+.  ..+++..+..++.|++.||+|||+++++||||||+||+++ ..
T Consensus        73 pnIv~~~~~~~~~~~~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~-~~  151 (287)
T d1opja_          73 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG-EN  151 (287)
T ss_dssp             TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC-GG
T ss_pred             CCEecCCccEeeCCeeEEEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEEC-CC
Confidence            5899999988654 8899999995 7999999763  5789999999999999999999999999999999999999 66


Q ss_pred             CeeEEecccccccccCCCCC-CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           78 KTVKIAADSGMAKEIDAPFD-AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +.+|+ +|||+++....... ......+++.|+|||++.+.. ++.++|+||+||++|
T Consensus       152 ~~~Kl-~DFG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~k~DiwS~Gv~l~  207 (287)
T d1opja_         152 HLVKV-ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK-FSIKSDVWAFGVLLW  207 (287)
T ss_dssp             GCEEE-CCCCCTTTCCSSSSEEETTEEECGGGCCHHHHHHCC-CSHHHHHHHHHHHHH
T ss_pred             CcEEE-ccccceeecCCCCceeeccccccccccChHHHcCCC-CCchhhhhhHHHHHH
Confidence            88999 89999987654432 233446788999999998776 789999999999987

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.5e-35  Score=193.31  Aligned_cols=131  Identities=33%  Similarity=0.672  Sum_probs=116.3

Q ss_pred             ccchhhhccceec-ceeEEEeccCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNINLHKFIQQ--YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      .||+++++.+..+ +.|+|||++++++.+++..  ...+++..+..++.|++.|++|||++||+||||||+||+++ ..+
T Consensus        61 p~Iv~~~~~~~~~~~~~iv~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~-~~~  139 (298)
T d1gz8a_          61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLIN-TEG  139 (298)
T ss_dssp             TTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC-TTS
T ss_pred             CcEEEeccccccccceeEEEeecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeec-ccC
Confidence            5789999999665 8899999998877777654  45799999999999999999999999999999999999999 668


Q ss_pred             eeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           79 TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .+++ +|||.++.............+|+.|+|||++....+.+.++|+||+||++|
T Consensus       140 ~~kl-~DFG~a~~~~~~~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily  194 (298)
T d1gz8a_         140 AIKL-ADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFA  194 (298)
T ss_dssp             CEEE-CSTTHHHHHCCCSBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHH
T ss_pred             ccee-ccCCcceeccCCcccceeecccceeeehhhhccccCCCccccccccchhhh
Confidence            8899 899999888766666777789999999999988776788999999999998

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.4e-35  Score=193.40  Aligned_cols=129  Identities=23%  Similarity=0.399  Sum_probs=102.5

Q ss_pred             cchhhhccceec--ceeEEEeccC-CCHHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHhhCCccc
Q 043346            3 EMMKSMSLWVHK--RENLVFEYVN-INLHKFIQQY----------------HPMDSHLIKKFLYCILSGISYCHARKIIH   63 (135)
Q Consensus         3 ~~~~~~~~~~~~--~~~lv~e~~~-~~L~~~~~~~----------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h   63 (135)
                      |++..+.++.+.  ..+++||||+ |+|.+++...                ..+++..+..++.|++.|++|||+++++|
T Consensus        78 ~iv~~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivH  157 (299)
T d1ywna1          78 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIH  157 (299)
T ss_dssp             TBCCEEEEECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             eEEEeeeeeccCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcC
Confidence            566676665433  6889999995 7999999752                24789999999999999999999999999


Q ss_pred             CCCCCcceeeecCCCeeEEecccccccccCCCC--CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           64 RDLTTMNLLADIENKTVKIAADSGMAKEIDAPF--DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        64 ~dl~~~nil~~~~~~~~~i~~d~~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      |||||+||+++ +.+.+|+ +|||+++......  .......||+.|+|||++.+.. ++.++|+||+||++|
T Consensus       158 rDlKp~NILl~-~~~~~Kl-~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~-~~~~sDiwS~Gvil~  227 (299)
T d1ywna1         158 RDLAARNILLS-EKNVVKI-CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLW  227 (299)
T ss_dssp             SCCCGGGEEEC-GGGCEEE-CC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCC-CCHHHHHHHHHHHHH
T ss_pred             CcCCccceeEC-CCCcEEE-ccCcchhhccccccccccCceeeCccccchhHhhcCC-CCcccceeehHHHHH
Confidence            99999999999 6789999 8999998664332  2344568999999999998776 789999999999987

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=7.1e-35  Score=190.60  Aligned_cols=131  Identities=20%  Similarity=0.315  Sum_probs=104.5

Q ss_pred             ccchhhhccceec-----ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeec
Q 043346            2 QEMMKSMSLWVHK-----RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI   75 (135)
Q Consensus         2 ~~~~~~~~~~~~~-----~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~   75 (135)
                      .|+++.++++...     ..|+||||++ ++|.+++...+.+++.++..++.|++.|++|||++|++||||||+||+++ 
T Consensus        67 pniv~~~~~~~~~~~~~~~~~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~-  145 (277)
T d1o6ya_          67 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS-  145 (277)
T ss_dssp             TTBCCEEEEEEEECSSSEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE-
T ss_pred             CCCCcccceeeeccCCCceEEEEEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccC-
Confidence            4788888877443     3789999996 59999999888999999999999999999999999999999999999999 


Q ss_pred             CCCeeEEecccccccccCCCC---CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           76 ENKTVKIAADSGMAKEIDAPF---DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        76 ~~~~~~i~~d~~~~~~~~~~~---~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ..+..++ +|||.+.......   .......||+.|+|||++.+.. +++++|+||+||++|.
T Consensus       146 ~~~~~~l-~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~-~~~~~DiwSlGvilye  206 (277)
T d1o6ya_         146 ATNAVKV-MDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS-VDARSDVYSLGCVLYE  206 (277)
T ss_dssp             TTSCEEE-CCCTTCEECC----------------TTCCHHHHTTCC-CCHHHHHHHHHHHHHH
T ss_pred             cccccee-ehhhhhhhhccccccccccccccCcccccCHHHHcCCC-CCcceecccchHHHHH
Confidence            6788888 7999887554332   2345568999999999998776 7889999999999983

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.8e-35  Score=194.46  Aligned_cols=130  Identities=18%  Similarity=0.349  Sum_probs=111.8

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecC-C
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYH-PMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE-N   77 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~-~   77 (135)
                      +||+++++++.++ +.|+|||||+ ++|.+++.+.+ .+++.++..++.|++.|++|||+.|++||||||+||+++.+ .
T Consensus        61 pnIv~~~~~~~~~~~~~lvmE~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~  140 (321)
T d1tkia_          61 RNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRS  140 (321)
T ss_dssp             TTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSC
T ss_pred             CCCCeEEEEEEECCEEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCCCc
Confidence            4899999988654 8999999996 59999998754 79999999999999999999999999999999999999743 3


Q ss_pred             CeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           78 KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ..+++ +|||++...... .......+++.|+|||...+.. ++.++|+||+||++|
T Consensus       141 ~~ikl-~DFG~~~~~~~~-~~~~~~~~t~~y~ape~~~~~~-~~~~~DiWSlGvily  194 (321)
T d1tkia_         141 STIKI-IEFGQARQLKPG-DNFRLLFTAPEYYAPEVHQHDV-VSTATDMWSLGTLVY  194 (321)
T ss_dssp             CCEEE-CCCTTCEECCTT-CEEEEEESCGGGSCHHHHTTCE-ECHHHHHHHHHHHHH
T ss_pred             eEEEE-cccchhhccccC-CcccccccccccccchhccCCC-CCchhhcccHHHHHH
Confidence            47888 899999876443 3344567899999999998776 788999999999998

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.9e-35  Score=190.06  Aligned_cols=130  Identities=18%  Similarity=0.356  Sum_probs=102.4

Q ss_pred             ccchhhhccceecceeEEEeccC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHKRENLVFEYVN-INLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      +||+++++++.++..|+|||+++ |+|.+++.. ...+++..+..++.|++.|+.|||+++++||||||+||+++ ..+.
T Consensus        68 pnIv~l~~~~~~~~~~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~-~~~~  146 (273)
T d1mp8a_          68 PHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS-SNDC  146 (273)
T ss_dssp             TTBCCEEEEECSSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE-ETTE
T ss_pred             CCEeeEEEEEecCeEEEEEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeec-CCCc
Confidence            58999999998889999999995 699998765 45789999999999999999999999999999999999999 6789


Q ss_pred             eEEecccccccccCCCCC-CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFD-AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +|+ +|||+++....... ......+|+.|+|||++.+.. ++.++|+|||||++|
T Consensus       147 ~Kl-~DfG~a~~~~~~~~~~~~~~~gt~~y~apE~l~~~~-~~~~~DiwSlGvil~  200 (273)
T d1mp8a_         147 VKL-GDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR-FTSASDVWMFGVCMW  200 (273)
T ss_dssp             EEE-CC-------------------CCGGGCCHHHHHHCC-CSHHHHHHHHHHHHH
T ss_pred             EEE-ccchhheeccCCcceeccceecCcccchhhHhccCC-CCCccccccchHHHH
Confidence            999 89999987654322 334456789999999998766 788999999999997

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-34  Score=190.35  Aligned_cols=130  Identities=23%  Similarity=0.343  Sum_probs=106.9

Q ss_pred             ccchhhhccceecceeEEEeccC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHKRENLVFEYVN-INLHKFIQQ--YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      .||+++++++.++..++||||+. |+|.+++..  .+.+++..+..++.|++.|++|||+++++||||||+||+++ .++
T Consensus        72 ~nIv~~~g~~~~~~~~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~-~~~  150 (285)
T d1fmka3          72 EKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG-ENL  150 (285)
T ss_dssp             TTBCCEEEEECSSSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC-GGG
T ss_pred             CCEeEEEEEEecCCeEEEEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEEC-CCC
Confidence            58999999998888999999995 699988864  45799999999999999999999999999999999999999 668


Q ss_pred             eeEEecccccccccCCCC-CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           79 TVKIAADSGMAKEIDAPF-DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .+|+ +|||+++...... .......+|+.|+|||.+.+.. ++.++|+||+|+++|
T Consensus       151 ~~kl-~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~ksDI~S~Giil~  205 (285)
T d1fmka3         151 VCKV-ADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKSDVWSFGILLT  205 (285)
T ss_dssp             CEEE-CCCCTTC--------------CCGGGSCHHHHHHCC-CCHHHHHHHHHHHHH
T ss_pred             cEEE-cccchhhhccCCCceeeccccccccccChHHHhCCC-CCcHHhhhcchHHHH
Confidence            8999 8999998764332 2334457899999999998766 788999999999997

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-34  Score=188.72  Aligned_cols=130  Identities=20%  Similarity=0.371  Sum_probs=104.3

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      +||+++++++.++ ..+++||++. +++.+.+.+ .+.+++..+..++.|++.|++|||+++++||||||+||+++ .++
T Consensus        69 ~nIv~~~g~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~-~~~  147 (283)
T d1mqba_          69 HNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVN-SNL  147 (283)
T ss_dssp             TTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC-TTC
T ss_pred             CCEeeeeEEEecCCceEEEEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhccccccccCccccceEEEC-CCC
Confidence            5899999988554 8899999995 588887765 46799999999999999999999999999999999999999 678


Q ss_pred             eeEEecccccccccCCCCC---CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           79 TVKIAADSGMAKEIDAPFD---AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~---~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .+|+ +|||+++.......   ......+|+.|+|||++.+.. ++.++|+|||||++|
T Consensus       148 ~~Kl-~DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~-~~~~sDI~S~Gvil~  204 (283)
T d1mqba_         148 VCKV-SDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRK-FTSASDVWSFGIVMW  204 (283)
T ss_dssp             CEEE-CCCCC-----------------CCCGGGSCHHHHHSCC-CCHHHHHHHHHHHHH
T ss_pred             eEEE-cccchhhcccCCCccceEeccCCCCccccCHHHHccCC-CCCcccccccHHHHH
Confidence            9999 89999987644322   223346789999999998776 788999999999997

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.6e-34  Score=190.37  Aligned_cols=130  Identities=20%  Similarity=0.336  Sum_probs=110.4

Q ss_pred             ccchhhhccceecceeEEEecc-CCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHKRENLVFEYV-NINLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      +||+++++++.++..++++|++ +++|.+++.. ...+++..+..++.|++.|+.|||+++++||||||+||+++ .++.
T Consensus        71 pnIv~l~g~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~-~~~~  149 (317)
T d1xkka_          71 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK-TPQH  149 (317)
T ss_dssp             TTBCCEEEEEESSSEEEEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE-ETTE
T ss_pred             CCEeeEEEEEecCCeeEEEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeC-CCCC
Confidence            5899999999888889999998 5799988876 45789999999999999999999999999999999999999 6789


Q ss_pred             eEEecccccccccCCCCC--CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFD--AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +|+ +|||+++.......  ......+|+.|+|||++.+.. ++.++|+|||||++|
T Consensus       150 ~kl-~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~-~~~~sDvwS~Gvil~  204 (317)
T d1xkka_         150 VKI-TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYGVTVW  204 (317)
T ss_dssp             EEE-CCCSHHHHTTTTCC--------CCTTTSCHHHHHHCC-CCHHHHHHHHHHHHH
T ss_pred             eEe-eccccceecccccccccccccccCccccChHHHhcCC-CChhhhhhhHHHHHH
Confidence            999 89999987654322  223446899999999998776 789999999999987

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-33  Score=183.06  Aligned_cols=130  Identities=17%  Similarity=0.348  Sum_probs=112.0

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCC
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENK   78 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~   78 (135)
                      +||+++++++.++ ..++||||++ |+|.+++.. ...+++..+..++.|++.|++|||+++++||||||+||+++ ..+
T Consensus        59 pnIv~~~g~~~~~~~~~iv~Ey~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~-~~~  137 (258)
T d1k2pa_          59 EKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVN-DQG  137 (258)
T ss_dssp             TTBCCEEEEECCSSSEEEEEECCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEEC-TTC
T ss_pred             CceeeEEEEEeeCCceEEEEEccCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEc-CCC
Confidence            5899999988654 8899999995 699999765 56789999999999999999999999999999999999999 678


Q ss_pred             eeEEecccccccccCCCCC-CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           79 TVKIAADSGMAKEIDAPFD-AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        79 ~~~i~~d~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      .+|+ +|||+++....... ......+|+.|+|||++.+.. ++.++|+||||+++|
T Consensus       138 ~~kl-~DfG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~-~~~ksDiwS~G~~l~  192 (258)
T d1k2pa_         138 VVKV-SDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSK-FSSKSDIWAFGVLMW  192 (258)
T ss_dssp             CEEE-CCCSSCCBCSSSSCCCCCCSCCCGGGCCHHHHHHCC-CCHHHHHHHHHHHHH
T ss_pred             cEEE-CcchhheeccCCCceeecccCCCCCcCCcHHhcCCC-CCcceeecccchhhH
Confidence            8999 89999986654322 333467899999999998776 788999999999987

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-33  Score=186.08  Aligned_cols=129  Identities=26%  Similarity=0.543  Sum_probs=107.7

Q ss_pred             ccchhhhccce------ecceeEEEeccCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceee
Q 043346            2 QEMMKSMSLWV------HKRENLVFEYVNINLHKFIQQ--YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLA   73 (135)
Q Consensus         2 ~~~~~~~~~~~------~~~~~lv~e~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~   73 (135)
                      .|++++++++.      +...+++||++++++..+...  ...+++..+..++.|++.||+|||+++|+||||||+||++
T Consensus        70 pnIv~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi  149 (305)
T d1blxa_          70 PNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV  149 (305)
T ss_dssp             TTBCCEEEEEEEEECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE
T ss_pred             CCcceeeeeecccccccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEE
Confidence            46788877763      236789999998765554443  4578999999999999999999999999999999999999


Q ss_pred             ecCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           74 DIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        74 ~~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      + ..+.+++ +|||++...... .......||+.|+|||++.+.+ ++.++|+||+||++|
T Consensus       150 ~-~~~~~kl-~dfg~~~~~~~~-~~~~~~~gT~~Y~APE~~~~~~-y~~~~DiwSlG~il~  206 (305)
T d1blxa_         150 T-SSGQIKL-ADFGLARIYSFQ-MALTSVVVTLWYRAPEVLLQSS-YATPVDLWSVGCIFA  206 (305)
T ss_dssp             C-TTCCEEE-CSCCSCCCCCGG-GGGCCCCCCCTTCCHHHHTTCC-CCTHHHHHHHHHHHH
T ss_pred             c-CCCCeee-cchhhhhhhccc-ccCCCcccChhhcCcchhcCCC-CChhehhhchHHHHH
Confidence            9 6788999 899998755333 3455678999999999998876 788999999999997

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.4e-33  Score=187.26  Aligned_cols=131  Identities=25%  Similarity=0.481  Sum_probs=108.6

Q ss_pred             ccchhhhccceec-------ceeEEEeccCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcc
Q 043346            2 QEMMKSMSLWVHK-------RENLVFEYVNINLHKFIQ----QYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMN   70 (135)
Q Consensus         2 ~~~~~~~~~~~~~-------~~~lv~e~~~~~L~~~~~----~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~n   70 (135)
                      .|++++++++...       +.|+||||+++++.+.+.    ....+++..+..++.|++.||+|||++||+||||||+|
T Consensus        73 ~niv~~~~~~~~~~~~~~~~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~N  152 (350)
T d1q5ka_          73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQN  152 (350)
T ss_dssp             TTBCCEEEEEEEC--CCSCCEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGG
T ss_pred             CCCCcEEEEEEecCccCCceEEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcce
Confidence            4678887776321       468999999876555543    35679999999999999999999999999999999999


Q ss_pred             eeeecCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           71 LLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        71 il~~~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      |+++.++..+|+ +|||++...... .......+++.|+|||.+.+...++.++|+||+||++|
T Consensus       153 ILl~~~~~~~kl-~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~  214 (350)
T d1q5ka_         153 LLLDPDTAVLKL-CDFGSAKQLVRG-EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLA  214 (350)
T ss_dssp             EEECTTTCCEEE-CCCTTCEECCTT-SCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHH
T ss_pred             EEEecCCCceeE-ecccchhhccCC-cccccccccccccChHHhhcccCCCcceeecccceEEE
Confidence            999966668899 899999876544 34455689999999999987766899999999999987

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=7.9e-33  Score=182.12  Aligned_cols=132  Identities=15%  Similarity=0.189  Sum_probs=110.4

Q ss_pred             ccchhhhccceec-ceeEEEeccCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeec----
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNINLHKFIQQY-HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI----   75 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~----   75 (135)
                      .+++.++.++..+ ..++|||+++++|.+++... ..++...+..++.|++.|+++||++|++||||||+||+++.    
T Consensus        61 ~~i~~~~~~~~~~~~~~~vme~~~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~  140 (293)
T d1csna_          61 TGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSK  140 (293)
T ss_dssp             TTCCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSST
T ss_pred             CCCCEEEEEeecCCccEEEEEecCCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccc
Confidence            3556666677555 78899999999999999764 47999999999999999999999999999999999999973    


Q ss_pred             CCCeeEEecccccccccCCCC-------CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhhC
Q 043346           76 ENKTVKIAADSGMAKEIDAPF-------DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        76 ~~~~~~i~~d~~~~~~~~~~~-------~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~~  135 (135)
                      ..+.+++ +|||+++......       .......||+.|+|||++.+.. +++++|+||||+++|+
T Consensus       141 ~~~~vkl-~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~-~~~~~DiwSlG~~l~e  205 (293)
T d1csna_         141 NANMIYV-VDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGRE-QSRRDDLEALGHVFMY  205 (293)
T ss_dssp             TTTCEEE-CCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCC-CCHHHHHHHHHHHHHH
T ss_pred             cCCceEE-cccceeEEcccCccccceeecccCceEEchhhcCHHHhcCCC-CChHHHHHHhhHHHHH
Confidence            2467899 8999998764331       1234568999999999998876 7899999999999973

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.8e-33  Score=182.89  Aligned_cols=130  Identities=27%  Similarity=0.452  Sum_probs=111.8

Q ss_pred             ccchhhhccceec-ceeEEEecc-CCCHHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHhhCCccc
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYV-NINLHKFIQQY----------------HPMDSHLIKKFLYCILSGISYCHARKIIH   63 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~-~~~L~~~~~~~----------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h   63 (135)
                      .||+++++++.++ ..++||||+ +|+|.+++...                ..+++..+..++.|++.|++|||+++++|
T Consensus        79 pnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivH  158 (299)
T d1fgka_          79 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIH  158 (299)
T ss_dssp             TTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             CeEEecccccccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEe
Confidence            4889999988655 799999999 47999999753                35899999999999999999999999999


Q ss_pred             CCCCCcceeeecCCCeeEEecccccccccCCCCC--CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           64 RDLTTMNLLADIENKTVKIAADSGMAKEIDAPFD--AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        64 ~dl~~~nil~~~~~~~~~i~~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      |||||+||+++ .++.+|+ +|||+++.......  ......+++.|+|||.+.+.. ++.++|+||||+++|
T Consensus       159 rDiKp~NiLl~-~~~~~kl-~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~-y~~k~DiwS~Gvvl~  228 (299)
T d1fgka_         159 RDLAARNVLVT-EDNVMKI-ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI-YTHQSDVWSFGVLLW  228 (299)
T ss_dssp             SCCSGGGEEEC-TTCCEEE-CSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCC-CCHHHHHHHHHHHHH
T ss_pred             eeecccceeec-CCCCeEe-ccchhhccccccccccccccCCCChhhhhhhHhcCCC-CCchhhhHHhHHHHH
Confidence            99999999999 6788999 89999987654322  334567889999999998766 789999999999987

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=3.6e-33  Score=183.17  Aligned_cols=131  Identities=37%  Similarity=0.631  Sum_probs=107.9

Q ss_pred             ccchhhhccceec-ceeEEEeccCCCHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNINLHKFI-QQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~~L~~~~-~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .||+++++.+.++ ..++++|++.+++...+ ..++.+++..+..++.|++.||+|||+.+|+||||||+||+++ .++.
T Consensus        60 pnIv~~~~~~~~~~~~~i~~e~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~-~~~~  138 (286)
T d1ob3a_          60 SNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLIN-REGE  138 (286)
T ss_dssp             TTBCCEEEEEECSSCEEEEEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC-TTSC
T ss_pred             CcEEeeeeecccCCceeEEEEeehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEc-CCCC
Confidence            4788898888655 88899999977554444 5577899999999999999999999999999999999999999 6788


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +|+ +|||.+..............+++.|+|||.+.+..+++.++|+||+||++|
T Consensus       139 ~kl-~DfG~a~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~  192 (286)
T d1ob3a_         139 LKI-ADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFA  192 (286)
T ss_dssp             EEE-CCTTHHHHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHH
T ss_pred             EEe-cccccceecccCccccceecccchhhhHHHHhCCCCCCcceeehhcCcHHH
Confidence            999 899999887665555566678999999999988776889999999999987

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-33  Score=182.55  Aligned_cols=130  Identities=22%  Similarity=0.315  Sum_probs=109.5

Q ss_pred             ccchhhhccceecceeEEEeccC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHKRENLVFEYVN-INLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      +||+++++++.++..++||||++ +++.+++.. .+.+++..+..++.|++.|+.|||+++++||||||+||+++ ..+.
T Consensus        71 ~nIv~~~g~~~~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~-~~~~  149 (273)
T d1u46a_          71 RNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLA-TRDL  149 (273)
T ss_dssp             TTBCCEEEEECSSSCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEE-ETTE
T ss_pred             CCEEEEEEEEeecchheeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhccc-cccc
Confidence            58999999998888899999995 699888765 45799999999999999999999999999999999999999 5688


Q ss_pred             eEEecccccccccCCCCC---CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFD---AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~---~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +|+ +|||+++.......   ......++..|+|||++.+.. ++.++|+||||+++|
T Consensus       150 vkl-~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~-~~~~~Di~S~Gvil~  205 (273)
T d1u46a_         150 VKI-GDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT-FSHASDTWMFGVTLW  205 (273)
T ss_dssp             EEE-CCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCE-EEHHHHHHHHHHHHH
T ss_pred             eee-ccchhhhhcccCCCcceecCccccCcccCCHHHHhCCC-CCcchhhhhhHHHHH
Confidence            999 89999997754422   223345678899999998776 788999999999987

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=2.7e-33  Score=185.56  Aligned_cols=129  Identities=26%  Similarity=0.369  Sum_probs=109.3

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHhhCCccc
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQY----------------HPMDSHLIKKFLYCILSGISYCHARKIIH   63 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~----------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h   63 (135)
                      +||+++++++.++ ..++||||++ |+|.+++.++                ..+++.....++.|++.|+.|+|+++++|
T Consensus        71 pnIv~~~~~~~~~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiH  150 (309)
T d1fvra_          71 PNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIH  150 (309)
T ss_dssp             TTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             CCEeeEEEEEecCCeeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccc
Confidence            5899999998665 7899999995 7999999753                56899999999999999999999999999


Q ss_pred             CCCCCcceeeecCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           64 RDLTTMNLLADIENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        64 ~dl~~~nil~~~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      |||||+||+++ ..+.+|+ +|||+++..... .......+|..|+|||.+.+.. ++.++|+||||+++|
T Consensus       151 rDlkp~NIL~~-~~~~~kl-~DfG~a~~~~~~-~~~~~~~gt~~y~aPE~l~~~~-~~~~sDvwSfGvil~  217 (309)
T d1fvra_         151 RDLAARNILVG-ENYVAKI-ADFGLSRGQEVY-VKKTMGRLPVRWMAIESLNYSV-YTTNSDVWSYGVLLW  217 (309)
T ss_dssp             SCCSGGGEEEC-GGGCEEE-CCTTCEESSCEE-CCC----CCTTTCCHHHHHHCE-ECHHHHHHHHHHHHH
T ss_pred             cccccceEEEc-CCCceEE-cccccccccccc-ccccceecCCcccchHHhccCC-CCccceeehhHHHHH
Confidence            99999999999 6688999 899999765433 2334456889999999998776 788999999999987

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=1.3e-32  Score=184.76  Aligned_cols=127  Identities=28%  Similarity=0.523  Sum_probs=109.9

Q ss_pred             ccchhhhccceec-------ceeEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeee
Q 043346            2 QEMMKSMSLWVHK-------RENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD   74 (135)
Q Consensus         2 ~~~~~~~~~~~~~-------~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~   74 (135)
                      .|++++++.+...       +.|+|||+++.+|.+..+. +++++..+..++.|++.||+|||++||+||||||+||+++
T Consensus        77 pniv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~  155 (346)
T d1cm8a_          77 ENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKH-EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVN  155 (346)
T ss_dssp             TTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC
T ss_pred             CCeeEEEEEeccCccccccceEEEEEecccccHHHHHHh-ccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhcc
Confidence            4778888877433       4699999998788887765 6899999999999999999999999999999999999999


Q ss_pred             cCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           75 IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        75 ~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                       .++.+++ +|||++......   .....+|+.|+|||++.+..+.+.++|+||+||++|
T Consensus       156 -~~~~~kl-~Dfg~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~  210 (346)
T d1cm8a_         156 -EDCELKI-LDFGLARQADSE---MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMA  210 (346)
T ss_dssp             -TTCCEEE-CCCTTCEECCSS---CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHH
T ss_pred             -ccccccc-ccccceeccCCc---cccccccccccCHHHHcCCCCCCccchhhcchHHHH
Confidence             7788999 899999876443   345678999999999988776789999999999997

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=1.9e-32  Score=181.66  Aligned_cols=130  Identities=21%  Similarity=0.378  Sum_probs=111.8

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcC------------------CCCHHHHHHHHHHHHHHHHHHhhCCc
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYH------------------PMDSHLIKKFLYCILSGISYCHARKI   61 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~------------------~~~~~~~~~~~~~i~~~l~~lh~~~i   61 (135)
                      .||+++++++.++ ..+++|||++ |+|.+++.+..                  .+++..+..++.|++.|++|||++++
T Consensus        87 pnIv~~~g~~~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~i  166 (311)
T d1t46a_          87 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC  166 (311)
T ss_dssp             TTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CCEEEEEEEEeeCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            4789999988655 7899999995 69999997632                  58899999999999999999999999


Q ss_pred             ccCCCCCcceeeecCCCeeEEecccccccccCCCC--CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           62 IHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPF--DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        62 ~h~dl~~~nil~~~~~~~~~i~~d~~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +||||||+||+++ ..+.+++ +|||.++......  .......+|+.|+|||.+.+.. ++.++|+||||+++|
T Consensus       167 vHrDLKp~NIl~~-~~~~~ki-~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DIwS~G~~l~  238 (311)
T d1t46a_         167 IHRDLAARNILLT-HGRITKI-CDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCV-YTFESDVWSYGIFLW  238 (311)
T ss_dssp             CCSCCSGGGEEEE-TTTEEEE-CCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCC-CCHHHHHHHHHHHHH
T ss_pred             eeccccccccccc-ccCcccc-cccchheeccCCCcceEeeecccChHHcCHHHhcCCC-CCCcccccchHHHHH
Confidence            9999999999999 6788999 8999998765432  2334568899999999998765 788999999999987

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.98  E-value=9.8e-33  Score=182.27  Aligned_cols=130  Identities=28%  Similarity=0.449  Sum_probs=108.4

Q ss_pred             ccchhhhccceec-ceeEEEecc-CCCHHHHHHhcC------------------------CCCHHHHHHHHHHHHHHHHH
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYV-NINLHKFIQQYH------------------------PMDSHLIKKFLYCILSGISY   55 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~-~~~L~~~~~~~~------------------------~~~~~~~~~~~~~i~~~l~~   55 (135)
                      .|+++.++.+... ..+++||++ +++|.+++....                        .++...+..++.|++.|++|
T Consensus        76 ~niv~~~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~y  155 (301)
T d1lufa_          76 PNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAY  155 (301)
T ss_dssp             TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHH
T ss_pred             CCcccceeeeccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhh
Confidence            3788888887544 889999999 579999997522                        37888999999999999999


Q ss_pred             HhhCCcccCCCCCcceeeecCCCeeEEecccccccccCCCC--CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhh
Q 043346           56 CHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDAPF--DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLL  133 (135)
Q Consensus        56 lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il  133 (135)
                      ||+++++||||||+||+++ .++.+|+ +|||+++......  .......+++.|+|||.+.+.. ++.++|+|||||++
T Consensus       156 lH~~~ivHrDlKp~NILld-~~~~~Kl-~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~t~ksDVwS~Gvvl  232 (301)
T d1lufa_         156 LSERKFVHRDLATRNCLVG-ENMVVKI-ADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNR-YTTESDVWAYGVVL  232 (301)
T ss_dssp             HHHTTCCCSCCSGGGEEEC-GGGCEEE-CCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCC-CCHHHHHHHHHHHH
T ss_pred             cccCCeEeeEEcccceEEC-CCCcEEE-ccchhheeccCCccccccCCCCcCcCcCCHHHHccCC-CChhhhhccchhhH
Confidence            9999999999999999999 6788999 8999998664332  2334567889999999998776 78999999999998


Q ss_pred             h
Q 043346          134 R  134 (135)
Q Consensus       134 ~  134 (135)
                      |
T Consensus       233 ~  233 (301)
T d1lufa_         233 W  233 (301)
T ss_dssp             H
T ss_pred             H
Confidence            7

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.97  E-value=3.9e-32  Score=181.20  Aligned_cols=128  Identities=23%  Similarity=0.489  Sum_probs=108.3

Q ss_pred             ccchhhhccce---ecceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC
Q 043346            2 QEMMKSMSLWV---HKRENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN   77 (135)
Q Consensus         2 ~~~~~~~~~~~---~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~   77 (135)
                      +||+++++++.   ....++|||+++ ++|.+.   .+.+++..+..++.|++.||+|||++||+||||||+||+++.++
T Consensus        90 pnIv~~~~~~~~~~~~~~~~v~e~~~~~~L~~~---~~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~  166 (328)
T d3bqca1          90 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQL---YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEH  166 (328)
T ss_dssp             TTBCCEEEEEECTTTCSEEEEEECCCSCBGGGT---TTSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTT
T ss_pred             CCCcEEEEEEEecCCCceeEEEeecCCCcHHHH---hcCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcCCC
Confidence            47788887764   236899999996 577654   35699999999999999999999999999999999999999666


Q ss_pred             CeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           78 KTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +.+++ +|||++...... .......+|+.|+|||.+.+...++.++|+||+||++|
T Consensus       167 ~~vkl-~DFG~a~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~  221 (328)
T d3bqca1         167 RKLRL-IDWGLAEFYHPG-QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA  221 (328)
T ss_dssp             TEEEE-CCGGGCEECCTT-CCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHH
T ss_pred             Ceeee-cccccceeccCC-CcccccccCccccCcccccCCCCCCcccchhhhhhhhH
Confidence            78899 899999876544 34456678999999999988776789999999999987

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=8.7e-33  Score=179.33  Aligned_cols=127  Identities=22%  Similarity=0.408  Sum_probs=102.6

Q ss_pred             ccchhhhcccee--cceeEEEeccC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecC
Q 043346            2 QEMMKSMSLWVH--KRENLVFEYVN-INLHKFIQQY--HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIE   76 (135)
Q Consensus         2 ~~~~~~~~~~~~--~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~   76 (135)
                      +||+++++++.+  +..|+||||++ |+|.+++.+.  ..+++..+..++.|++.|+.|||+++++||||+|+||+++ .
T Consensus        60 pnIv~~~g~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~-~  138 (262)
T d1byga_          60 SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVS-E  138 (262)
T ss_dssp             TTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC-T
T ss_pred             CCEeeEEEEEEecCCcEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhheec-C
Confidence            589999998743  36899999995 6999999763  3589999999999999999999999999999999999999 6


Q ss_pred             CCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           77 NKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        77 ~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ++.+++ +|||+++.....   .....+++.|+|||++.+.. +++++|+||||+++|
T Consensus       139 ~~~~kl-~dfg~s~~~~~~---~~~~~~~~~y~aPE~l~~~~-~t~~sDIwSfG~il~  191 (262)
T d1byga_         139 DNVAKV-SDFGLTKEASST---QDTGKLPVKWTAPEALREKK-FSTKSDVWSFGILLW  191 (262)
T ss_dssp             TSCEEE-CCCCC---------------CCTTTSCHHHHHHCC-CCHHHHHHHHHHHHH
T ss_pred             CCCEee-cccccceecCCC---CccccccccCCChHHHhCCC-CChHHHHHhHHHHHH
Confidence            788999 899999865433   23346788999999998766 789999999999987

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.97  E-value=7.6e-32  Score=177.78  Aligned_cols=125  Identities=20%  Similarity=0.230  Sum_probs=103.4

Q ss_pred             hccceec-ceeEEEeccCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeec--CCCeeEEe
Q 043346            8 MSLWVHK-RENLVFEYVNINLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI--ENKTVKIA   83 (135)
Q Consensus         8 ~~~~~~~-~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~--~~~~~~i~   83 (135)
                      ..+..++ ..++|||++++++.+.+.. .+.+++..+..++.|++.|++|||++|++||||||+||++..  .+..+++ 
T Consensus        69 ~~~~~~~~~~~ivme~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl-  147 (299)
T d1ckia_          69 RWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYI-  147 (299)
T ss_dssp             EEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEE-
T ss_pred             EEEEecCCEEEEEEEEcCCchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeee-
Confidence            3333333 6789999999988887765 568999999999999999999999999999999999999763  3456888 


Q ss_pred             cccccccccCCCC-------CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           84 ADSGMAKEIDAPF-------DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        84 ~d~~~~~~~~~~~-------~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +|||+++......       .......||+.|+|||++.+.. +++++|+|||||++|
T Consensus       148 ~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~~l~  204 (299)
T d1ckia_         148 IDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIE-QSRRDDLESLGYVLM  204 (299)
T ss_dssp             CCCSSCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBC-CCHHHHHHHHHHHHH
T ss_pred             eccCcceeccccccccceeccccCCcCCCccccCHHHHhCCC-CCChhhEEecCHHHH
Confidence            8999998765432       2234568999999999998876 789999999999987

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=6.7e-32  Score=181.18  Aligned_cols=130  Identities=28%  Similarity=0.473  Sum_probs=105.8

Q ss_pred             ccchhhhccceec------ceeEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeec
Q 043346            2 QEMMKSMSLWVHK------RENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADI   75 (135)
Q Consensus         2 ~~~~~~~~~~~~~------~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~   75 (135)
                      .|++++++.+...      ..+++++.++++|.+++.. .++++..+..++.|++.|++|||++||+||||||+||+++ 
T Consensus        66 p~iv~~~~~~~~~~~~~~~~~~l~~~~~~g~L~~~l~~-~~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~-  143 (345)
T d1pmea_          66 ENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN-  143 (345)
T ss_dssp             TTBCCCCEEECCSSTTTCCCEEEEEECCCEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC-
T ss_pred             CCCCcEEEEEeeccccccceEEEEEeecCCchhhhhhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEEC-
Confidence            3567777666432      2455555557799999976 5799999999999999999999999999999999999999 


Q ss_pred             CCCeeEEecccccccccCCCC---CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           76 ENKTVKIAADSGMAKEIDAPF---DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        76 ~~~~~~i~~d~~~~~~~~~~~---~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +.+.+|+ +|||++.......   .......+|+.|+|||++.....++.++|+||+||++|
T Consensus       144 ~~~~~kl-~DfG~a~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~  204 (345)
T d1pmea_         144 TTCDLKI-CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILA  204 (345)
T ss_dssp             TTCCEEE-CCCTTCEECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHH
T ss_pred             CCCCEEE-cccCceeeccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceeh
Confidence            6788999 8999997653321   22355678999999999977666789999999999987

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=9.5e-32  Score=178.18  Aligned_cols=130  Identities=23%  Similarity=0.369  Sum_probs=110.2

Q ss_pred             ccchhhhcccee--cceeEEEeccC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCC
Q 043346            2 QEMMKSMSLWVH--KRENLVFEYVN-INLHKFIQQ-YHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIEN   77 (135)
Q Consensus         2 ~~~~~~~~~~~~--~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~   77 (135)
                      +||+++++++.+  +..++||||++ ++|.+++.. ....+...+..++.|++.|+.|+|+.+++||||||+||+++ ++
T Consensus        88 pnIv~~~g~~~~~~~~~~lv~E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~-~~  166 (311)
T d1r0pa_          88 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLD-EK  166 (311)
T ss_dssp             TTBCCCCEEEEETTTEEEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC-TT
T ss_pred             CCEeEEeEEEEecCCceEEEEEEeecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeEC-CC
Confidence            589999998754  37899999995 699998875 34677888999999999999999999999999999999999 77


Q ss_pred             CeeEEecccccccccCCCC----CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           78 KTVKIAADSGMAKEIDAPF----DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        78 ~~~~i~~d~~~~~~~~~~~----~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +.+|+ +|||+++......    .......+|+.|+|||.+.+.. ++.++|+||||+++|
T Consensus       167 ~~~kL-~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~ksDI~SfGivl~  225 (311)
T d1r0pa_         167 FTVKV-ADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQK-FTTKSDVWSFGVLLW  225 (311)
T ss_dssp             CCEEE-CSSGGGCCTTTTTCCCTTCTTCSSCCGGGSCHHHHHHCC-CCHHHHHHHHHHHHH
T ss_pred             CCEEE-ecccchhhccccccccceecccccccccccChHHHhcCC-CCChhHhhhhHHHHH
Confidence            89999 8999998764332    1233457889999999997766 789999999999997

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=5.3e-32  Score=180.17  Aligned_cols=132  Identities=23%  Similarity=0.323  Sum_probs=112.4

Q ss_pred             ccchhhhccceec-ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      .||++.++.+.++ ..+++||++. ++|.+++..++.+++..+..++.|++.|++|+|+++++||||||+||+++ ..+.
T Consensus        89 pnIv~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~-~~~~  167 (322)
T d1vzoa_          89 PFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLD-SNGH  167 (322)
T ss_dssp             TTBCCEEEEEEETTEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC-TTSC
T ss_pred             CeEEEeeeeeccCCceeeeeecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeec-CCCC
Confidence            3788888888655 8889999995 69999999988999999999999999999999999999999999999999 6688


Q ss_pred             eEEecccccccccCCCC-CCCCCCcccccccCcccccCCC-CCCchhHHHHhhhhhhC
Q 043346           80 VKIAADSGMAKEIDAPF-DAHTTEMVILRYRAPKILFGRT-NCFAAIDMWAVLYLLRW  135 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~-~~~~~~D~wslg~il~~  135 (135)
                      +++ +|||+++.+.... .......+++.|++||.+.+.. +++.++|+||+||++|.
T Consensus       168 vkL-~DFG~a~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLye  224 (322)
T d1vzoa_         168 VVL-TDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYE  224 (322)
T ss_dssp             EEE-SCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHH
T ss_pred             EEE-eeccchhhhcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHH
Confidence            999 8999998764432 2345667899999999997654 36778999999999983

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4e-32  Score=179.44  Aligned_cols=130  Identities=26%  Similarity=0.354  Sum_probs=106.8

Q ss_pred             ccchhhhccceec-----ceeEEEeccC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhh--------CCcccCCCC
Q 043346            2 QEMMKSMSLWVHK-----RENLVFEYVN-INLHKFIQQYHPMDSHLIKKFLYCILSGISYCHA--------RKIIHRDLT   67 (135)
Q Consensus         2 ~~~~~~~~~~~~~-----~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~--------~~i~h~dl~   67 (135)
                      +||+++++++.+.     ..|+||||++ |+|.+++++ .++++.....++.|++.|+.|+|+        ++|+|||||
T Consensus        57 pnIv~~~~~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~-~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlK  135 (303)
T d1vjya_          57 ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR-YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLK  135 (303)
T ss_dssp             TTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCC
T ss_pred             CcCcceEEEEEeCCCcceEEEEEEecccCCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccC
Confidence            4789998888543     4789999995 699999987 468899999999999999999996        599999999


Q ss_pred             CcceeeecCCCeeEEecccccccccCCCCC----CCCCCcccccccCcccccCCCC-----CCchhHHHHhhhhhh
Q 043346           68 TMNLLADIENKTVKIAADSGMAKEIDAPFD----AHTTEMVILRYRAPKILFGRTN-----CFAAIDMWAVLYLLR  134 (135)
Q Consensus        68 ~~nil~~~~~~~~~i~~d~~~~~~~~~~~~----~~~~~~~~~~~~ape~~~~~~~-----~~~~~D~wslg~il~  134 (135)
                      |+||+++ ..+.+|+ +|||+++.......    ......||+.|+|||++.+...     ++.++|+|||||++|
T Consensus       136 p~NILl~-~~~~~Kl-~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~  209 (303)
T d1vjya_         136 SKNILVK-KNGTCCI-ADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFW  209 (303)
T ss_dssp             GGGEEEC-TTSCEEE-CCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHH
T ss_pred             ccceEEc-CCCCeEE-EecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHH
Confidence            9999999 7789999 89999987644322    2345678999999999865431     356799999999987

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.5e-31  Score=175.65  Aligned_cols=131  Identities=31%  Similarity=0.624  Sum_probs=114.9

Q ss_pred             ccchhhhccceec-ceeEEEeccCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCe
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYVNI-NLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKT   79 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~   79 (135)
                      +|+++.++.+.+. ..+++++++.+ ++..+...++.+++..+..++.|++.||+|||+++|+||||||+||+++ ..+.
T Consensus        61 ~niv~~~~~~~~~~~~~iv~~~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~-~~~~  139 (292)
T d1unla_          61 KNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLIN-RNGE  139 (292)
T ss_dssp             TTBCCEEEEEECSSEEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC-TTCC
T ss_pred             CCEEeeccccccccceeEEeeeccccccccccccccccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccc-cCCc
Confidence            4788888888666 77899999965 7887777788999999999999999999999999999999999999999 6678


Q ss_pred             eEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           80 VKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        80 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      +++ +|||.+..............+++.|+|||++.+....+.++|+||+||++|
T Consensus       140 ~kl-~DFG~a~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~  193 (292)
T d1unla_         140 LKL-ANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFA  193 (292)
T ss_dssp             EEE-CCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHH
T ss_pred             eee-eecchhhcccCCCccceeeccccchhhhhHhccCCCCCchhhccccchHHH
Confidence            999 899999987766566666677889999999987776789999999999987

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=5e-31  Score=175.12  Aligned_cols=118  Identities=28%  Similarity=0.534  Sum_probs=99.7

Q ss_pred             ceeEEEeccCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEecccccccccC
Q 043346           15 RENLVFEYVNINLHKFIQ-QYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEID   93 (135)
Q Consensus        15 ~~~lv~e~~~~~L~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~~~   93 (135)
                      ..|++||++++.+..... ....+++..+..++.|++.|+.|||++||+||||||+||+++ .++.+++ +|||++....
T Consensus        91 ~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~-~~~~~kl-~dfg~~~~~~  168 (318)
T d3blha1          91 SIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT-RDGVLKL-ADFGLARAFS  168 (318)
T ss_dssp             CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC-TTSCEEE-CCCTTCEECC
T ss_pred             eEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeec-CCCcEEe-eecceeeecc
Confidence            678999999875555444 456899999999999999999999999999999999999999 6788999 8999997664


Q ss_pred             CCC----CCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           94 APF----DAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        94 ~~~----~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ...    .......+|+.|+|||++.+...+++++|+||+||++|
T Consensus       169 ~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~  213 (318)
T d3blha1         169 LAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMA  213 (318)
T ss_dssp             C-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHH
T ss_pred             cccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceee
Confidence            321    23344678999999999987766889999999999987

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=5.9e-31  Score=174.17  Aligned_cols=130  Identities=22%  Similarity=0.349  Sum_probs=110.0

Q ss_pred             ccchhhhccceec-ceeEEEecc-CCCHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCc
Q 043346            2 QEMMKSMSLWVHK-RENLVFEYV-NINLHKFIQQY----------HPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTM   69 (135)
Q Consensus         2 ~~~~~~~~~~~~~-~~~lv~e~~-~~~L~~~~~~~----------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~   69 (135)
                      +|+++.++.+..+ ..++|||++ +|+|.+++...          ..++...+..++.|++.|+.|||+++++||||||+
T Consensus        83 ~nIv~~~~~~~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~  162 (308)
T d1p4oa_          83 HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAAR  162 (308)
T ss_dssp             TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGG
T ss_pred             CCEeeeeeEEecCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCC
Confidence            4889999988544 889999999 57999998642          24688899999999999999999999999999999


Q ss_pred             ceeeecCCCeeEEecccccccccCCCCC--CCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           70 NLLADIENKTVKIAADSGMAKEIDAPFD--AHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        70 nil~~~~~~~~~i~~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ||+++ .++.+|+ +|||+++.......  ......+|+.|+|||.+.+.. ++.++|+||+|+++|
T Consensus       163 NiLld-~~~~~Kl-~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~-~~~~~Dv~S~G~il~  226 (308)
T d1p4oa_         163 NCMVA-EDFTVKI-GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGV-FTTYSDVWSFGVVLW  226 (308)
T ss_dssp             GEEEC-TTCCEEE-CCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCC-CCHHHHHHHHHHHHH
T ss_pred             ceeec-CCceEEE-eecccceeccCCcceeeccceecccccCCHHHHccCC-CCcccccccHHHHHH
Confidence            99999 7789999 89999986643322  234456899999999998776 678999999999987

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.5e-30  Score=175.10  Aligned_cols=127  Identities=29%  Similarity=0.507  Sum_probs=98.8

Q ss_pred             ccchhhhccce-------ecceeEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeee
Q 043346            2 QEMMKSMSLWV-------HKRENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD   74 (135)
Q Consensus         2 ~~~~~~~~~~~-------~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~   74 (135)
                      +||++.++.+.       .+..|+||||+.+++.+.+.  ..+++..+..++.|++.|+.|||++|++||||||+||+++
T Consensus        76 pnIv~~~~~f~~~~~~~~~~~~~iv~Ey~~~~l~~~~~--~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~  153 (355)
T d2b1pa1          76 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK  153 (355)
T ss_dssp             TTBCCCSEEECSCCSTTTCCEEEEEEECCSEEHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC
T ss_pred             CCeeEEEEEEecccccccCceeEEEEeccchHHHHhhh--cCCCHHHHHHHHHHHHHHHHHhhhcccccccCCccccccc
Confidence            47888877763       24789999999888777664  4689999999999999999999999999999999999999


Q ss_pred             cCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           75 IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        75 ~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                       ..+..++ +|||+++..... .......+|+.|+|||++.+.. +++++|+||+||++|
T Consensus       154 -~~~~~kl-~df~~~~~~~~~-~~~~~~~~t~~y~aPE~l~~~~-~~~~~DiwSlG~~l~  209 (355)
T d2b1pa1         154 -SDCTLKI-LDFGLARTAGTS-FMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMG  209 (355)
T ss_dssp             -TTCCEEE-CCCCC----------------CCTTCCHHHHTTCC-CCTTHHHHHHHHHHH
T ss_pred             -cccceee-echhhhhccccc-cccccccccccccChhhhcCCC-CCCCcccccccchHH
Confidence             6677898 799988765443 3445567899999999998865 788999999999987

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.5e-30  Score=174.57  Aligned_cols=127  Identities=24%  Similarity=0.490  Sum_probs=101.7

Q ss_pred             ccchhhhccce------ecceeEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeee
Q 043346            2 QEMMKSMSLWV------HKRENLVFEYV-NINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLAD   74 (135)
Q Consensus         2 ~~~~~~~~~~~------~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~   74 (135)
                      .|++++++.+.      +...+++++++ +++|.+++.. +++++..+..++.|++.||+|||++|++||||||+||+++
T Consensus        77 ~~iv~~~~~~~~~~~~~~~~~~~i~~~~~gg~L~~~~~~-~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~  155 (348)
T d2gfsa1          77 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN  155 (348)
T ss_dssp             TTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC
T ss_pred             CCeeeEEEEEeeccccccCceEEEEEeecCCchhhhccc-ccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCcccccc
Confidence            36677766653      22345566666 6799999866 5799999999999999999999999999999999999999


Q ss_pred             cCCCeeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           75 IENKTVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        75 ~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                       .++.+++ +|||.+.....   ......+++.|+|||...+..+.+.++|+||+||++|
T Consensus       156 -~~~~~kl-~dfg~a~~~~~---~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~  210 (348)
T d2gfsa1         156 -EDCELKI-LDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA  210 (348)
T ss_dssp             -TTCCEEE-CCC----CCTG---GGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHH
T ss_pred             -ccccccc-cccchhcccCc---ccccccccccccCchhhcCCccCCcccchhhhhHHHH
Confidence             6788999 89999875432   3455678999999999988776788999999999997

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.92  E-value=5.1e-25  Score=148.08  Aligned_cols=127  Identities=28%  Similarity=0.439  Sum_probs=98.3

Q ss_pred             cchhhhccceec---ceeEEEecc--CCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHhh-CCcccCCCCCcceeee
Q 043346            3 EMMKSMSLWVHK---RENLVFEYV--NINLHKFIQ--QYHPMDSHLIKKFLYCILSGISYCHA-RKIIHRDLTTMNLLAD   74 (135)
Q Consensus         3 ~~~~~~~~~~~~---~~~lv~e~~--~~~L~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~~~nil~~   74 (135)
                      |++++++.+...   ..+++++++  .++......  ....+++..+..++.|++.|+.|||+ .||+||||||+||+++
T Consensus        81 ~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~  160 (362)
T d1q8ya_          81 HILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLME  160 (362)
T ss_dssp             TBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEE
T ss_pred             ceEEEEEEeeeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeee
Confidence            577777776432   455666665  334444443  34678999999999999999999998 8999999999999998


Q ss_pred             cCCC-----eeEEecccccccccCCCCCCCCCCcccccccCcccccCCCCCCchhHHHHhhhhhh
Q 043346           75 IENK-----TVKIAADSGMAKEIDAPFDAHTTEMVILRYRAPKILFGRTNCFAAIDMWAVLYLLR  134 (135)
Q Consensus        75 ~~~~-----~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~~D~wslg~il~  134 (135)
                      ....     .+++ +|||.+......   .....+|+.|+|||++.+.. +++++|+||+||+++
T Consensus       161 ~~~~~~~~~~~kl-~dfg~s~~~~~~---~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~  220 (362)
T d1q8ya_         161 IVDSPENLIQIKI-ADLGNACWYDEH---YTNSIQTREYRSPEVLLGAP-WGCGADIWSTACLIF  220 (362)
T ss_dssp             EEETTTTEEEEEE-CCCTTCEETTBC---CCSCCSCGGGCCHHHHHTCC-CCTHHHHHHHHHHHH
T ss_pred             ccCcccccceeeE-eecccccccccc---cccccccccccChhhccccC-CCccccccchHHHHH
Confidence            4322     4788 899998765432   34567899999999998776 688999999999986

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.53  E-value=5.1e-15  Score=91.00  Aligned_cols=72  Identities=21%  Similarity=0.262  Sum_probs=56.8

Q ss_pred             ceeEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCCcceeeecCCCeeEEecccccccccCC
Q 043346           15 RENLVFEYVNINLHKFIQQYHPMDSHLIKKFLYCILSGISYCHARKIIHRDLTTMNLLADIENKTVKIAADSGMAKEIDA   94 (135)
Q Consensus        15 ~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~~~~   94 (135)
                      ..+++||++++...      ..++......++.|++.++.+||++|++||||||+||+++ + ..+++ +|||.+.....
T Consensus        84 ~~~lvme~~~~~~~------~~l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~-~-~~~~l-iDFG~a~~~~~  154 (191)
T d1zara2          84 GNAVLMELIDAKEL------YRVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-E-EGIWI-IDFPQSVEVGE  154 (191)
T ss_dssp             TTEEEEECCCCEEG------GGCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-T-TEEEE-CCCTTCEETTS
T ss_pred             CCEEEEEeeccccc------cchhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeee-C-CCEEE-EECCCcccCCC
Confidence            35799999976311      1244555678899999999999999999999999999998 4 45788 79999876543


Q ss_pred             C
Q 043346           95 P   95 (135)
Q Consensus        95 ~   95 (135)
                      +
T Consensus       155 ~  155 (191)
T d1zara2         155 E  155 (191)
T ss_dssp             T
T ss_pred             C
Confidence            3

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=95.08  E-value=0.0051  Score=39.14  Aligned_cols=31  Identities=23%  Similarity=0.183  Sum_probs=24.8

Q ss_pred             CCcccCCCCCcceeeecCCCeeEEecccccccc
Q 043346           59 RKIIHRDLTTMNLLADIENKTVKIAADSGMAKE   91 (135)
Q Consensus        59 ~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~   91 (135)
                      .|++|+|+.++|++++ ++...-+ +||+.+..
T Consensus       183 ~giIHgDl~~dNvl~~-~~~v~gv-IDF~~~~~  213 (316)
T d2ppqa1         183 AGVIHADLFQDNVFFL-GDELSGL-IDFYFACN  213 (316)
T ss_dssp             EEEECSCCCGGGEEEE-TTEEEEE-CCCTTCEE
T ss_pred             cccccCCcchhhhhcc-cccceeE-eccccccc
Confidence            5899999999999999 4444456 69998753

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.45  E-value=0.024  Score=34.70  Aligned_cols=30  Identities=23%  Similarity=0.337  Sum_probs=23.3

Q ss_pred             CcccCCCCCcceeeecCCCeeEEecccccccc
Q 043346           60 KIIHRDLTTMNLLADIENKTVKIAADSGMAKE   91 (135)
Q Consensus        60 ~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~   91 (135)
                      .++|+|+.|.|++++ +++..-+ +||+.+..
T Consensus       184 ~l~HgD~~~~Nil~~-~~~~~~l-IDwe~a~~  213 (263)
T d1j7la_         184 VFSHGDLGDSNIFVK-DGKVSGF-IDLGRSGR  213 (263)
T ss_dssp             EEECSCCCTTSEEEE-TTEEEEE-CCCTTCEE
T ss_pred             EEEEeeccCcceeec-CCceEEE-eechhccc
Confidence            478999999999998 5454456 69987753

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=92.76  E-value=0.031  Score=34.04  Aligned_cols=30  Identities=17%  Similarity=0.254  Sum_probs=23.3

Q ss_pred             CcccCCCCCcceeeecCCCeeEEecccccccc
Q 043346           60 KIIHRDLTTMNLLADIENKTVKIAADSGMAKE   91 (135)
Q Consensus        60 ~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~   91 (135)
                      .++|+|+.|.|+++. +++..-+ +||+.+..
T Consensus       176 ~liHgD~~~~Nvl~~-~~~~~~i-ID~~~~~~  205 (255)
T d1nd4a_         176 VVTHGDACLPNIMVE-NGRFSGF-IDCGRLGV  205 (255)
T ss_dssp             EEECSSCCGGGEEEE-TTEEEEE-CCCTTCEE
T ss_pred             eEEeCCCCCcceEEe-CCceEEE-EEchhccc
Confidence            479999999999998 4444556 69987653

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=91.88  E-value=0.17  Score=32.12  Aligned_cols=29  Identities=21%  Similarity=0.175  Sum_probs=22.6

Q ss_pred             CCcccCCCCCcceeeecCCCeeEEecccccccc
Q 043346           59 RKIIHRDLTTMNLLADIENKTVKIAADSGMAKE   91 (135)
Q Consensus        59 ~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~   91 (135)
                      .+++|+|+.+.|++++ + +. .+ +||+.+..
T Consensus       192 ~~liHgDlh~~NvL~~-~-~~-~~-IDFdd~~~  220 (325)
T d1zyla1         192 VLRLHGDCHAGNILWR-D-GP-MF-VDLDDARN  220 (325)
T ss_dssp             CEECCSSCSGGGEEES-S-SE-EE-CCCTTCCE
T ss_pred             ceeecCCCCcccEEEe-C-Cc-eE-Eechhccc
Confidence            4789999999999987 3 33 45 69988763

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=89.04  E-value=0.11  Score=34.01  Aligned_cols=30  Identities=33%  Similarity=0.454  Sum_probs=23.6

Q ss_pred             CCcccCCCCCcceeeecCCCeeEEecccccccc
Q 043346           59 RKIIHRDLTTMNLLADIENKTVKIAADSGMAKE   91 (135)
Q Consensus        59 ~~i~h~dl~~~nil~~~~~~~~~i~~d~~~~~~   91 (135)
                      ..++|+|+.+.||+++ ++ .+++ +|+..+..
T Consensus       223 ~~LiHGDl~~gNIlv~-~~-~~~v-ID~E~a~~  252 (392)
T d2pula1         223 ETLIHGDLHTGSIFAS-EH-ETKV-IDPEFAFY  252 (392)
T ss_dssp             CEEECSCCCGGGEEEC-SS-CEEE-CCCTTCEE
T ss_pred             cceeccCCcCCceeEc-CC-ceEE-echhhccc
Confidence            3689999999999998 43 3677 69987753