Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>043351
MIVGLGMCIVLLSSYFNISATRSFFQEFNENTDNIISCKTCDMVHDFSQYLSEQLVISSF
DEKIKRLHISCKMYDTVHEFSQHLSEELFISSFDEKVCHSILTLSFISVNSRNLLQELFG
ELTCLRALCISNNSFESNNLIKEIPPNVGKLVHLRYLNLSDKFIETTGVFVNTIIMPCLS
SFQIESCPKLKMLPYYLLQTTKLQELKIYLCHILEEWL

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  043351
        (218 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

UNIPROTKB|Q96L50 - symbol:LRR1 "Leucine-rich repeat prote...   117  0.00013   1
TAIR|locus:2152536 - symbol:AT5G48620 species:3702 "Arabi...    83  0.00031   2


>UNIPROTKB|Q96L50 [details] [associations]
            symbol:LRR1 "Leucine-rich repeat protein 1" species:9606
            "Homo sapiens" [GO:0016567 "protein ubiquitination" evidence=IEA]
            Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 UniPathway:UPA00143
            Reactome:REACT_6900 eggNOG:COG4886 GO:GO:0016567 EMBL:CH471078
            InterPro:IPR025875 Pfam:PF12799 EMBL:AY052405 EMBL:BX248298
            EMBL:AK293156 EMBL:BC030142 EMBL:BC093697 EMBL:BC112241
            EMBL:BC139921 IPI:IPI00167013 IPI:IPI00743306 RefSeq:NP_689542.2
            RefSeq:NP_982292.1 UniGene:Hs.451090 ProteinModelPortal:Q96L50
            SMR:Q96L50 IntAct:Q96L50 STRING:Q96L50 PhosphoSite:Q96L50
            DMDM:37079896 PRIDE:Q96L50 DNASU:122769 Ensembl:ENST00000298288
            Ensembl:ENST00000318317 GeneID:122769 KEGG:hsa:122769
            UCSC:uc001wwn.3 UCSC:uc001wwo.3 CTD:122769 GeneCards:GC14P050067
            H-InvDB:HIX0037761 HGNC:HGNC:19742 MIM:609193 neXtProt:NX_Q96L50
            PharmGKB:PA134915321 HOGENOM:HOG000273865 HOVERGEN:HBG045576
            InParanoid:Q96L50 KO:K10348 OMA:VCGRFCL PhylomeDB:Q96L50
            GenomeRNAi:122769 NextBio:80991 ArrayExpress:Q96L50 Bgee:Q96L50
            CleanEx:HS_PPIL5 Genevestigator:Q96L50 GermOnline:ENSG00000165501
            Uniprot:Q96L50
        Length = 414

 Score = 117 (46.2 bits), Expect = 0.00013, P = 0.00013
 Identities = 29/87 (33%), Positives = 51/87 (58%)

Query:   125 LRALCISN-NSFE-SNNLIKEIPPNVGKLVHLRYLNLSDKFIETTGVFV-NTIIMPCLSS 181
             +R LC+ +    + S+N IK++P  +G L+HL+ LNL+D  +E+  V + ++ +   L S
Sbjct:   171 MRMLCLKSLRKLDLSHNHIKKLPATIGDLIHLQELNLNDNHLESFSVALCHSTLQKSLRS 230

Query:   182 FQIESCPKLKMLPYYLLQTTKLQELKI 208
               + S  K+K LP    Q  +L+ LK+
Sbjct:   231 LDL-SKNKIKALPVQFCQLQELKNLKL 256


>TAIR|locus:2152536 [details] [associations]
            symbol:AT5G48620 species:3702 "Arabidopsis thaliana"
            [GO:0006952 "defense response" evidence=IEA;ISS] [GO:0043531 "ADP
            binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IDA]
            InterPro:IPR000767 InterPro:IPR002182 Pfam:PF00931 PRINTS:PR00364
            GO:GO:0005886 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
            GO:GO:0006952 GO:GO:0043531 EMBL:AB015468 HOGENOM:HOG000237753
            ProtClustDB:CLSN2686488 EMBL:AK117163 EMBL:BT005968 IPI:IPI00520996
            RefSeq:NP_199673.1 UniGene:At.47555 UniGene:At.49144
            ProteinModelPortal:Q9FJK8 SMR:Q9FJK8 STRING:Q9FJK8 PaxDb:Q9FJK8
            PRIDE:Q9FJK8 EnsemblPlants:AT5G48620.1 GeneID:834919
            KEGG:ath:AT5G48620 TAIR:At5g48620 eggNOG:NOG327384
            InParanoid:Q9FJK8 OMA:FWIRSAS PhylomeDB:Q9FJK8
            Genevestigator:Q9FJK8 Uniprot:Q9FJK8
        Length = 908

 Score = 83 (34.3 bits), Expect = 0.00031, Sum P(2) = 0.00031
 Identities = 20/42 (47%), Positives = 23/42 (54%)

Query:   176 MPCLSSFQIESCPKLKMLPYYLLQTTKLQELKIYLCHILEEW 217
             MPCL +  I  C KLK LP  L   T L+ELKI    +  EW
Sbjct:   842 MPCLRTLTIHDCEKLKELPDGLKYITSLKELKIR--EMKREW 881

 Score = 80 (33.2 bits), Expect = 0.00031, Sum P(2) = 0.00031
 Identities = 19/42 (45%), Positives = 25/42 (59%)

Query:   118 LFGELTCLRALCISNNSFESNNLIKEIPPNVGKLVHLRYLNL 159
             +F  LT LR L +S   FE   L    P ++G L+HLRYL+L
Sbjct:   571 VFHNLTLLRVLDLSRVKFEGGKL----PSSIGGLIHLRYLSL 608


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.325   0.138   0.410    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      218       218   0.00091  112 3  11 22  0.44    32
                                                     32  0.39    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  596 (63 KB)
  Total size of DFA:  176 KB (2101 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  23.88u 0.09s 23.97t   Elapsed:  00:00:02
  Total cpu time:  23.88u 0.09s 23.97t   Elapsed:  00:00:02
  Start:  Thu May  9 22:38:03 2013   End:  Thu May  9 22:38:05 2013

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