Your job contains 1 sequence.
>043353
MARPRTARNRSPVSKQESYKFKFSDVDWTHKISDCPAYYPTLQEFDDPFIYLQKIAPEAS
QFGICKIISPVKASVSAADVLKKEIKGFEFGTYRQPLRLPKWNANDTGVFFSGERKHTYD
TFESEAIKMLKRQSPRLGDLPPSYVEKKFWLEMTHGRKGTVEYGVNIEGSAFSSDPNDQL
GKCKWHLKTLRGLPQSIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSG
APKTWYGVPGHHALQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVS
VYKAVQKPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHKMVIL
PYQELLFKEVSEHEGTDIPSSVKATVLHQIRSLNNALFCLNNLKMPFDYLQNSQGSFVCD
LCKRDCYLAFTECKSCQRYTCLFHEFKSRHCSCGYNRVVLLRKDIQEVEVVAKKFEEEEI
MSRHLNIISCIGEGLARNS
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 043353
(499 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2146653 - symbol:ELF6 "EARLY FLOWERING 6" spec... 503 9.1e-62 3
UNIPROTKB|G4N2P7 - symbol:MGG_04878 "Lid2 complex compone... 454 5.4e-58 4
TAIR|locus:2196979 - symbol:JMJ18 "Jumonji domain-contain... 438 8.8e-55 3
TAIR|locus:504955644 - symbol:REF6 "relative of early flo... 486 1.4e-54 2
TAIR|locus:2044697 - symbol:MEE27 "maternal effect embryo... 476 3.6e-54 2
UNIPROTKB|Q9UGL1 - symbol:KDM5B "Lysine-specific demethyl... 486 4.1e-53 2
MGI|MGI:1922855 - symbol:Kdm5b "lysine (K)-specific demet... 486 4.1e-53 2
RGD|1565602 - symbol:Kdm5b "lysine (K)-specific demethyla... 486 4.1e-53 2
RGD|1305429 - symbol:Kdm5a "lysine (K)-specific demethyla... 492 6.9e-53 2
UNIPROTKB|E9PSW7 - symbol:Jarid1a "Protein Jarid1a" speci... 492 6.9e-53 2
UNIPROTKB|F1MQ59 - symbol:KDM5A "Uncharacterized protein"... 496 1.1e-52 2
MGI|MGI:2136980 - symbol:Kdm5a "lysine (K)-specific demet... 493 3.0e-52 2
ASPGD|ASPL0000010243 - symbol:AN8211 species:162425 "Emer... 437 3.4e-52 3
UNIPROTKB|E9PSM3 - symbol:Jarid1a "Protein Jarid1a" speci... 492 3.8e-52 2
UNIPROTKB|E7EV89 - symbol:KDM5A "Lysine-specific demethyl... 468 3.9e-52 2
UNIPROTKB|F1Q4J4 - symbol:KDM5A "Uncharacterized protein"... 491 4.8e-52 2
UNIPROTKB|F5H1F7 - symbol:KDM5A "Lysine-specific demethyl... 490 5.6e-52 2
UNIPROTKB|P29375 - symbol:KDM5A "Lysine-specific demethyl... 490 6.2e-52 2
TAIR|locus:2128659 - symbol:JMJ14 "JUMONJI 14" species:37... 451 1.3e-51 2
UNIPROTKB|F1S4N3 - symbol:KDM5B "Uncharacterized protein"... 479 1.8e-51 2
ZFIN|ZDB-GENE-060810-94 - symbol:kdm5c "lysine (K)-specif... 476 4.5e-51 2
DICTYBASE|DDB_G0268778 - symbol:rbbB "putative Retinoblas... 541 4.8e-51 1
ZFIN|ZDB-GENE-030424-1 - symbol:kdm5bb "lysine (K)-specif... 468 6.7e-51 2
UNIPROTKB|B4E1Y0 - symbol:KDM5D "Lysine-specific demethyl... 459 2.9e-50 2
UNIPROTKB|Q5F3R2 - symbol:KDM5B "Lysine-specific demethyl... 457 4.8e-50 2
MGI|MGI:99780 - symbol:Kdm5d "lysine (K)-specific demethy... 469 4.9e-50 2
UNIPROTKB|Q30DN6 - symbol:KDM5D "Lysine-specific demethyl... 464 4.9e-50 2
UNIPROTKB|F1NN75 - symbol:KDM5A "Uncharacterized protein"... 482 5.0e-50 2
ZFIN|ZDB-GENE-030131-5379 - symbol:kdm5ba "lysine (K)-spe... 457 2.4e-49 2
UNIPROTKB|E9PFH2 - symbol:KDM5D "Lysine-specific demethyl... 459 3.0e-49 2
UNIPROTKB|Q9BY66 - symbol:KDM5D "Lysine-specific demethyl... 459 3.4e-49 2
POMBASE|SPAC1002.05c - symbol:jmj2 "histone demethylase J... 432 8.9e-49 2
UNIPROTKB|A1YVX4 - symbol:KDM5C "Lysine-specific demethyl... 456 1.1e-48 2
UNIPROTKB|F1RUI7 - symbol:KDM5C "Lysine-specific demethyl... 454 1.8e-48 2
UNIPROTKB|E2R0S2 - symbol:KDM5C "Lysine-specific demethyl... 454 1.8e-48 2
MGI|MGI:99781 - symbol:Kdm5c "lysine (K)-specific demethy... 454 2.0e-48 2
UNIPROTKB|F1MYV2 - symbol:KDM5C "Uncharacterized protein"... 454 2.0e-48 2
UNIPROTKB|Q38JA7 - symbol:KDM5C "Lysine-specific demethyl... 454 2.0e-48 2
UNIPROTKB|B0QZ44 - symbol:KDM5C "Smcy homolog, X-linked (... 454 2.0e-48 2
UNIPROTKB|P41229 - symbol:KDM5C "Lysine-specific demethyl... 454 2.0e-48 2
UNIPROTKB|K7GNM7 - symbol:KDM5C "Lysine-specific demethyl... 454 2.0e-48 2
FB|FBgn0031759 - symbol:lid "little imaginal discs" speci... 446 3.0e-47 2
UNIPROTKB|F1NUR9 - symbol:KDM5B "Lysine-specific demethyl... 457 3.3e-47 2
UNIPROTKB|I3L8V3 - symbol:KDM5A "Uncharacterized protein"... 490 8.8e-47 1
UNIPROTKB|F1NRC4 - symbol:KDM5B "Lysine-specific demethyl... 457 1.8e-46 2
TAIR|locus:2025635 - symbol:PKDM7D species:3702 "Arabidop... 408 4.1e-46 2
WB|WBGene00004319 - symbol:rbr-2 species:6239 "Caenorhabd... 402 1.5e-45 3
UNIPROTKB|Q23541 - symbol:rbr-2 "Lysine-specific demethyl... 402 1.5e-45 3
UNIPROTKB|D4A3B4 - symbol:D4A3B4 "Uncharacterized protein... 423 3.4e-45 2
UNIPROTKB|B3KV94 - symbol:JARID1B "cDNA FLJ16281 fis, clo... 486 4.3e-45 1
UNIPROTKB|F1PJS3 - symbol:KDM5B "Uncharacterized protein"... 486 5.7e-45 1
UNIPROTKB|F1MUR2 - symbol:KDM5B "Uncharacterized protein"... 479 3.2e-44 1
CGD|CAL0000662 - symbol:orf19.5651 species:5476 "Candida ... 376 6.1e-40 2
TAIR|locus:2031290 - symbol:AT1G63490 species:3702 "Arabi... 418 7.3e-40 2
UNIPROTKB|Q6B0I6 - symbol:KDM4D "Lysine-specific demethyl... 363 2.5e-33 1
MGI|MGI:3606484 - symbol:Kdm4d "lysine (K)-specific demet... 354 3.7e-33 2
UNIPROTKB|Q9U297 - symbol:jmjd-2 "Lysine-specific demethy... 360 6.8e-32 1
SGD|S000003880 - symbol:JHD2 "JmjC domain family histone ... 330 1.1e-30 2
RGD|1591045 - symbol:Kdm4d "lysine (K)-specific demethyla... 347 2.2e-30 1
FB|FBgn0033233 - symbol:Kdm4A "Histone demethylase 4A" sp... 345 3.0e-30 1
UNIPROTKB|B2RXH2 - symbol:KDM4E "Lysine-specific demethyl... 345 4.2e-30 1
UNIPROTKB|O94953 - symbol:KDM4B "Lysine-specific demethyl... 349 1.7e-29 1
UNIPROTKB|F5GX28 - symbol:KDM4B "Lysine-specific demethyl... 349 1.8e-29 1
UNIPROTKB|E2R243 - symbol:KDM4B "Uncharacterized protein"... 349 1.8e-29 1
MGI|MGI:2442355 - symbol:Kdm4b "lysine (K)-specific demet... 348 2.5e-29 1
UNIPROTKB|E1BX38 - symbol:Gga.52669 "Uncharacterized prot... 348 2.6e-29 1
UNIPROTKB|E1BA41 - symbol:KDM4B "Uncharacterized protein"... 348 2.6e-29 1
ZFIN|ZDB-GENE-120215-3 - symbol:si:ch211-215f22.3 "si:ch2... 349 4.2e-29 1
SGD|S000000971 - symbol:RPH1 "JmjC domain-containing hist... 323 6.2e-29 2
UNIPROTKB|F1PHR7 - symbol:KDM4C "Uncharacterized protein"... 341 2.2e-28 1
FB|FBgn0053182 - symbol:Kdm4B "Histone demethylase 4B" sp... 336 2.2e-28 1
ZFIN|ZDB-GENE-030131-6279 - symbol:kdm4ab "lysine (K)-spe... 338 3.3e-28 2
ZFIN|ZDB-GENE-070705-160 - symbol:si:ch211-262l3.1 "si:ch... 338 3.3e-28 2
UNIPROTKB|O75164 - symbol:KDM4A "Lysine-specific demethyl... 339 4.1e-28 1
UNIPROTKB|Q5RD88 - symbol:KDM4A "Lysine-specific demethyl... 339 4.1e-28 1
UNIPROTKB|E1BPL5 - symbol:KDM4A "Uncharacterized protein"... 339 4.2e-28 1
RGD|1307528 - symbol:Kdm4c "lysine (K)-specific demethyla... 337 7.4e-28 1
MGI|MGI:1924054 - symbol:Kdm4c "lysine (K)-specific demet... 337 7.4e-28 1
UNIPROTKB|Q9H3R0 - symbol:KDM4C "Lysine-specific demethyl... 337 7.5e-28 1
ZFIN|ZDB-GENE-060503-664 - symbol:kdm4b "lysine (K)-speci... 337 8.4e-28 1
RGD|1306378 - symbol:Kdm4a "lysine (K)-specific demethyla... 336 8.5e-28 1
MGI|MGI:2446210 - symbol:Kdm4a "lysine (K)-specific demet... 336 1.0e-27 1
UNIPROTKB|E2RFE0 - symbol:KDM4A "Uncharacterized protein"... 336 1.0e-27 1
UNIPROTKB|F1SMN9 - symbol:F1SMN9 "Uncharacterized protein... 337 1.2e-27 2
TAIR|locus:2064910 - symbol:AT2G38950 species:3702 "Arabi... 263 4.5e-27 3
UNIPROTKB|F1N9S1 - symbol:F1N9S1 "Uncharacterized protein... 331 5.2e-27 2
CGD|CAL0004209 - symbol:orf19.2730 species:5476 "Candida ... 323 1.1e-26 1
CGD|CAL0004229 - symbol:orf19.2743 species:5476 "Candida ... 323 1.1e-26 1
UNIPROTKB|Q5AF79 - symbol:RPH2 "Potential jumonji-like tr... 323 1.1e-26 1
UNIPROTKB|Q5AFV0 - symbol:RPH1 "Potential jumonji-like tr... 323 1.1e-26 1
UNIPROTKB|F1RUJ7 - symbol:JARID2 "Uncharacterized protein... 275 2.0e-26 3
UNIPROTKB|E1C6D5 - symbol:KDM4A "Uncharacterized protein"... 325 2.1e-26 1
ZFIN|ZDB-GENE-060503-246 - symbol:jarid2b "jumonji, AT ri... 284 3.2e-26 2
UNIPROTKB|F1MH56 - symbol:JARID2 "Uncharacterized protein... 270 8.6e-26 3
FB|FBgn0036004 - symbol:Jarid2 "Jumonji, AT rich interact... 264 1.1e-25 2
UNIPROTKB|Q92833 - symbol:JARID2 "Protein Jumonji" specie... 271 1.3e-25 3
MGI|MGI:104813 - symbol:Jarid2 "jumonji, AT rich interact... 272 2.0e-25 3
UNIPROTKB|F1P6D5 - symbol:JARID2 "Uncharacterized protein... 271 4.3e-25 3
UNIPROTKB|J9NWC2 - symbol:JARID2 "Uncharacterized protein... 271 4.5e-25 3
ZFIN|ZDB-GENE-070209-38 - symbol:zgc:153957 "zgc:153957" ... 314 7.5e-25 1
WARNING: Descriptions of 19 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2146653 [details] [associations]
symbol:ELF6 "EARLY FLOWERING 6" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA;TAS] [GO:0048577 "negative regulation
of short-day photoperiodism, flowering" evidence=IMP] [GO:0048579
"negative regulation of long-day photoperiodism, flowering"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009741 "response to brassinosteroid stimulus" evidence=IMP]
[GO:0009826 "unidimensional cell growth" evidence=IMP] [GO:0033169
"histone H3-K9 demethylation" evidence=IMP] [GO:0009630
"gravitropism" evidence=RCA] [GO:0019344 "cysteine biosynthetic
process" evidence=RCA] [GO:0043687 "post-translational protein
modification" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] InterPro:IPR003347
InterPro:IPR007087 InterPro:IPR013087 InterPro:IPR015880
Pfam:PF02373 PROSITE:PS00028 PROSITE:PS50157 PROSITE:PS51184
SMART:SM00355 SMART:SM00558 GO:GO:0005634 EMBL:CP002688
GO:GO:0046872 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0003676 GO:GO:0009826 GO:GO:0016702 eggNOG:COG5048
Gene3D:3.30.160.60 GO:GO:0048577 GO:GO:0033169 GO:GO:0009741
EMBL:AL391716 GO:GO:0048579 InterPro:IPR003349 PROSITE:PS51183
EMBL:AY664500 EMBL:AK222064 IPI:IPI00540726 RefSeq:NP_196044.2
UniGene:At.10092 UniGene:At.72547 HSSP:P08151
ProteinModelPortal:Q6BDA0 SMR:Q6BDA0 DIP:DIP-46102N IntAct:Q6BDA0
PRIDE:Q6BDA0 EnsemblPlants:AT5G04240.1 GeneID:830303
KEGG:ath:AT5G04240 TAIR:At5g04240 HOGENOM:HOG000239739
InParanoid:Q6BDA0 OMA:CGEAANF PhylomeDB:Q6BDA0
ProtClustDB:CLSN2681632 ArrayExpress:Q6BDA0 Genevestigator:Q6BDA0
Pfam:PF02375 SMART:SM00545 Uniprot:Q6BDA0
Length = 1340
Score = 503 (182.1 bits), Expect = 9.1e-62, Sum P(3) = 9.1e-62
Identities = 93/189 (49%), Positives = 126/189 (66%)
Query: 179 QLGKCKWHLKTLRGLPQSIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHH 238
+L W+L+ + P S+ RF+ IPG+T PM+YIGMLFS FAWHVEDH LHS+NY H
Sbjct: 259 KLSNSSWNLQMIARSPGSVTRFMPDDIPGVTSPMVYIGMLFSWFAWHVEDHELHSMNYLH 318
Query: 239 SGAPKTWYGVPGHHALQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNG 298
+G+PKTWY VP +AL FE+V R Y R+I A A + EKTT+ P++++ +G
Sbjct: 319 TGSPKTWYAVPCDYALDFEEVIRKNSYGRNIDQLA----ALTQLGEKTTLVSPEMIVASG 374
Query: 299 VSVYKAVQKPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHKMV 358
+ + VQ PGEFV+TFPR YH GFS+GFNCGEA NF W +EA R A ++ +
Sbjct: 375 IPCCRLVQNPGEFVVTFPRSYHVGFSHGFNCGEAANFGTPQWLNVAKEAAVRRAAMNYLP 434
Query: 359 ILPYQELLF 367
+L +Q+LL+
Sbjct: 435 MLSHQQLLY 443
Score = 115 (45.5 bits), Expect = 9.1e-62, Sum P(3) = 9.1e-62
Identities = 22/45 (48%), Positives = 27/45 (60%)
Query: 27 DWTHKISDCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISPV 71
+W + P + PT EF DP Y+ KI EAS FGICKII P+
Sbjct: 8 NWLKALPLAPVFRPTDTEFADPIAYISKIEKEASAFGICKIIPPL 52
Score = 80 (33.2 bits), Expect = 9.1e-62, Sum P(3) = 9.1e-62
Identities = 26/97 (26%), Positives = 43/97 (44%)
Query: 101 KWNANDTGV--FFSGERKHTYDTFESEAIKMLKRQSPRLGDLPPSYVEKKFWLEMTHGRK 158
K N+ +GV + +T D FE+++ K Q + +L P +E FW +
Sbjct: 111 KSNSQRSGVKQVWQSGGVYTLDQFEAKSKAFYKTQLGTVKELAPVVIEALFWKAALE-KP 169
Query: 159 GTVEYGVNIEGSAFSSDPNDQLGKCKWHLKTLRGLPQ 195
+EY ++ GSAF +P D + + RG Q
Sbjct: 170 IYIEYANDVPGSAFG-EPEDHFRHFRQRKRRGRGFYQ 205
>UNIPROTKB|G4N2P7 [details] [associations]
symbol:MGG_04878 "Lid2 complex component lid2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001841
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00184
SMART:SM00249 SMART:SM00501 SMART:SM00558 GO:GO:0005634
EMBL:CM001233 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
KO:K11446 RefSeq:XP_003712359.1 EnsemblFungi:MGG_04878T0
GeneID:2675627 KEGG:mgr:MGG_04878 Uniprot:G4N2P7
Length = 1755
Score = 454 (164.9 bits), Expect = 5.4e-58, Sum P(4) = 5.4e-58
Identities = 98/231 (42%), Positives = 134/231 (58%)
Query: 145 VEKKFW-LEMTHGRKGTVEYGVNIE----GSAFSS---DPNDQLGKCKWHLKTLRGLPQS 196
VE++FW L + VEYG +I GS F + +P+D W+L L P+S
Sbjct: 560 VEREFWRLVSSIEETVEVEYGADIHCTTHGSGFPTAEKNPDDPYSTDPWNLNILPLHPES 619
Query: 197 IFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQF 256
+FR+++ I G+T P +Y+GM+FS F WH EDHY +S NY H GA KTWYG+PG A +F
Sbjct: 620 LFRYIKSDISGMTVPWVYVGMIFSTFCWHNEDHYSYSANYQHFGATKTWYGIPGEDAEKF 679
Query: 257 EKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFP 316
E R + L A D F+++ T+ PP+ L GV VY Q+ G+FVITFP
Sbjct: 680 EAAMREAIPE---LFATQPDLLFQLV----TLLPPEQLKKAGVRVYAIDQRAGQFVITFP 732
Query: 317 RVYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHKMVILPYQELLF 367
+ YHAGF++GFN EAVNFA DW PFG +R + + + ELL+
Sbjct: 733 QAYHAGFNHGFNFNEAVNFAPSDWEPFGLAGVERLQQFRRQPCFSHDELLW 783
Score = 136 (52.9 bits), Expect = 5.4e-58, Sum P(4) = 5.4e-58
Identities = 21/39 (53%), Positives = 30/39 (76%)
Query: 32 ISDCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISP 70
+ + P YYPT +EF +P Y++KIAPEA ++GICKI+ P
Sbjct: 92 VEEAPTYYPTAEEFKEPMAYMRKIAPEARKYGICKIVPP 130
Score = 54 (24.1 bits), Expect = 5.4e-58, Sum P(4) = 5.4e-58
Identities = 14/55 (25%), Positives = 23/55 (41%)
Query: 399 CLNNLKMPFDYLQNSQGSFVCDLCKRDCYLAFTECKSCQRYTCLFHEFKSRHCSC 453
CL + K+ + + + + C CK YL+ +C + CL H H C
Sbjct: 842 CLLSFKVEDEDVPEEE--YQCGYCKVYTYLSRFKCLKSGQVLCLLHA--GHHACC 892
Score = 47 (21.6 bits), Expect = 5.4e-58, Sum P(4) = 5.4e-58
Identities = 11/27 (40%), Positives = 13/27 (48%)
Query: 122 FESEAIKMLKRQSPRLGDLPPSYVEKK 148
FE + LK+ R D SY EKK
Sbjct: 516 FEEGGLYSLKQFQERAADFKQSYFEKK 542
>TAIR|locus:2196979 [details] [associations]
symbol:JMJ18 "Jumonji domain-containing protein 18"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0032453 "histone demethylase activity (H3-K4 specific)"
evidence=IDA] [GO:0048573 "photoperiodism, flowering" evidence=IMP]
InterPro:IPR003347 InterPro:IPR003888 InterPro:IPR003889
InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928 Pfam:PF05964
Pfam:PF05965 PROSITE:PS51184 PROSITE:PS51542 PROSITE:PS51543
SMART:SM00541 SMART:SM00542 SMART:SM00558 EMBL:CP002684
GO:GO:0005634 GO:GO:0003700 GO:GO:0048573 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 GO:GO:0032453 KO:K11446
IPI:IPI00545873 RefSeq:NP_001185118.1 RefSeq:NP_174367.6
UniGene:At.27326 UniGene:At.74914 ProteinModelPortal:F4I6G4
SMR:F4I6G4 PRIDE:F4I6G4 EnsemblPlants:AT1G30810.1
EnsemblPlants:AT1G30810.2 GeneID:839963 KEGG:ath:AT1G30810
OMA:NCERECF Uniprot:F4I6G4
Length = 819
Score = 438 (159.2 bits), Expect = 8.8e-55, Sum P(3) = 8.8e-55
Identities = 93/231 (40%), Positives = 128/231 (55%)
Query: 136 RLGDLPPSYVEKKFWLEMTHGRKGTVEYGVNIEGSAFSSDPNDQLGKCKWHLKTLRGLPQ 195
R+ + P VE + ++ +G G+ G F+ +Q W+L L LP
Sbjct: 221 RIVEQPTDEVEVYYGADLENGVLGS---GFYKRAEKFTGSDMEQYTLSGWNLNNLPRLPG 277
Query: 196 SIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQ 255
S+ F + I G+ P LY+GM FS F WHVEDH+L+S+NYHH G PK WYGVPG +A
Sbjct: 278 SVLSFEDCDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYHHFGEPKVWYGVPGSNATA 337
Query: 256 FEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITF 315
EK R + D+ E+ +++ T F P IL D GV Y+ VQ GE+V+TF
Sbjct: 338 LEKAMRKHL--PDLF----EEQP-DLLHGLVTQFSPSILKDEGVQAYRVVQNSGEYVLTF 390
Query: 316 PRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHKMVILPYQELL 366
PR YHAGF+ GFNC EAVN A DW G+ A + Y++ + L + +LL
Sbjct: 391 PRAYHAGFNCGFNCAEAVNVAPVDWLAHGQNAVELYSKETRKTSLSHDKLL 441
Score = 117 (46.2 bits), Expect = 8.8e-55, Sum P(3) = 8.8e-55
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 32 ISDCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISP 70
I+D P + P+L+EF DP Y++KI P A +GIC+II P
Sbjct: 56 INDAPVFTPSLEEFVDPLAYIEKIRPLAEPYGICRIIPP 94
Score = 63 (27.2 bits), Expect = 8.8e-55, Sum P(3) = 8.8e-55
Identities = 21/61 (34%), Positives = 29/61 (47%)
Query: 404 KMPFDYLQNSQGSFVCDLCKRDCYLAFTECK-SCQRYTCLFHEFKSRHCSCGY-NRVVLL 461
KM D+ N + C C D +L+ + CK S + Y CL H CSC + +LL
Sbjct: 506 KMEKDFDSNCERE--CFSCFYDLHLSASGCKCSPEEYACLKHA--DDLCSCDVKDGFILL 561
Query: 462 R 462
R
Sbjct: 562 R 562
>TAIR|locus:504955644 [details] [associations]
symbol:REF6 "relative of early flowering 6"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=IMP] [GO:0035067 "negative regulation of histone
acetylation" evidence=IMP] [GO:0009741 "response to brassinosteroid
stimulus" evidence=IMP] [GO:0009826 "unidimensional cell growth"
evidence=IMP] [GO:0033169 "histone H3-K9 demethylation"
evidence=IMP] [GO:0048366 "leaf development" evidence=IMP]
InterPro:IPR003347 InterPro:IPR007087 InterPro:IPR013087
InterPro:IPR015880 Pfam:PF02373 PROSITE:PS00028 PROSITE:PS50157
PROSITE:PS51184 SMART:SM00355 SMART:SM00558 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0003676 GO:GO:0009826
GO:GO:0016702 Gene3D:3.30.160.60 GO:GO:0010228 GO:GO:0048366
GO:GO:0033169 GO:GO:0009741 GO:GO:0035067 EMBL:AL049659
InterPro:IPR003349 PROSITE:PS51183 HSSP:P08151 Pfam:PF02375
SMART:SM00545 EMBL:AY664499 IPI:IPI00537359 PIR:T06699
RefSeq:NP_680116.2 UniGene:At.3169 ProteinModelPortal:Q9STM3
SMR:Q9STM3 DIP:DIP-46006N IntAct:Q9STM3 PaxDb:Q9STM3 PRIDE:Q9STM3
EnsemblPlants:AT3G48430.1 GeneID:824002 KEGG:ath:AT3G48430
TAIR:At3g48430 eggNOG:NOG303077 HOGENOM:HOG000082763
InParanoid:Q9STM3 OMA:ELVINHE PhylomeDB:Q9STM3
ProtClustDB:CLSN2918915 Genevestigator:Q9STM3 Uniprot:Q9STM3
Length = 1360
Score = 486 (176.1 bits), Expect = 1.4e-54, Sum P(2) = 1.4e-54
Identities = 107/301 (35%), Positives = 166/301 (55%)
Query: 94 RQPLRLPKWNANDTGVFFSGERKHTYDTFESEAIKMLKRQSPRLGDLPPSYVEKKFWLEM 153
++P++ P W + + F GE + FE +K ++S +L L +E +W
Sbjct: 110 QRPVQRPVWQSGEEYSF--GEFEFKAKNFEKNYLKKCGKKS-QLSALE---IETLYW-RA 162
Query: 154 THGRKGTVEYGVNIEGSAF------------SSDPNDQLGKCKWHLKTLRGLPQSIFRFL 201
T + +VEY ++ GSAF S +G+ W+++ + S+ +F+
Sbjct: 163 TVDKPFSVEYANDMPGSAFIPLSLAAARRRESGGEGGTVGETAWNMRAMSRAEGSLLKFM 222
Query: 202 EHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVAR 261
+ IPG+T PM+Y+ M+FS FAWHVEDH LHS+NY H GA KTWYGVP AL FE+V R
Sbjct: 223 KEEIPGVTSPMVYVAMMFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPKDAALAFEEVVR 282
Query: 262 NQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPRVYHA 321
Y ++ F + EKTT+ P++ + G+ + VQ PGEFV+TFP YH+
Sbjct: 283 VHGYGEELNPLV----TFSTLGEKTTVMSPEVFVKAGIPCCRLVQNPGEFVVTFPGAYHS 338
Query: 322 GFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHKMVILPYQELLFKEVSEHEGTDIPSS 381
GFS+GFN GEA N A +W ++A R A ++ ++ + +LL+ V G+ +P+S
Sbjct: 339 GFSHGFNFGEASNIATPEWLRMAKDAAIRRAAINYPPMVSHLQLLYDFVLAL-GSRVPTS 397
Query: 382 V 382
+
Sbjct: 398 I 398
Score = 120 (47.3 bits), Expect = 1.4e-54, Sum P(2) = 1.4e-54
Identities = 21/44 (47%), Positives = 28/44 (63%)
Query: 28 WTHKISDCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISPV 71
W + P + PTL EF DP Y+ KI EAS++GICKI+ P+
Sbjct: 13 WLKSLPVAPEFRPTLAEFQDPIAYILKIEEEASRYGICKILPPL 56
>TAIR|locus:2044697 [details] [associations]
symbol:MEE27 "maternal effect embryo arrest 27"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA;TAS] [GO:0009793 "embryo development
ending in seed dormancy" evidence=IMP] [GO:0009555 "pollen
development" evidence=IMP] InterPro:IPR003347 InterPro:IPR003888
InterPro:IPR003889 InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928
Pfam:PF05964 Pfam:PF05965 PROSITE:PS51184 PROSITE:PS51542
PROSITE:PS51543 SMART:SM00541 SMART:SM00542 SMART:SM00558
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009555
GO:GO:0003700 GO:GO:0009793 EMBL:AC004238 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
HOGENOM:HOG000241335 KO:K11446 IPI:IPI00542103 PIR:T00470
RefSeq:NP_181034.1 UniGene:At.53035 ProteinModelPortal:O64752
SMR:O64752 EnsemblPlants:AT2G34880.1 GeneID:818053
KEGG:ath:AT2G34880 TAIR:At2g34880 InParanoid:O64752 OMA:DICSCEG
PhylomeDB:O64752 ProtClustDB:CLSN2683666 ArrayExpress:O64752
Genevestigator:O64752 Uniprot:O64752
Length = 806
Score = 476 (172.6 bits), Expect = 3.6e-54, Sum P(2) = 3.6e-54
Identities = 139/418 (33%), Positives = 198/418 (47%)
Query: 91 GTYRQPLRLPKWNANDTGVFFSGERKHTYDTFESEAIKMLKRQSPR---LGDLPPSYVEK 147
G+ + + PK + F SG + T + FE A R +GD +E
Sbjct: 158 GSVSKSVSTPKATEEENFGFESGP-EFTLEKFEKYAQDFKDSYFERKDNVGDPSVEEIEG 216
Query: 148 KFW-LEMTHGRKGTVEYGVNIE----GSAFSSD---PN-----DQLGKCKWHLKTLRGLP 194
++W + + V YG ++E GS FS P D+ W+L L L
Sbjct: 217 EYWRIIEKETNEVKVLYGTDLENPILGSGFSKGVKIPTRRNDMDKYISSGWNLNNLARLQ 276
Query: 195 QSIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHAL 254
S+ F + I G+ P LY+GM FS F WHVED++L+S+NYHH G PK WYGVPG HA
Sbjct: 277 GSLLSFEDCEISGVQVPWLYVGMCFSTFCWHVEDNHLYSLNYHHFGEPKVWYGVPGSHAT 336
Query: 255 QFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVIT 314
EK R + D+ D +++ E T F P IL + GV VY+AVQ GE+V+T
Sbjct: 337 GLEKAMRKHL--PDLF-----DEQPDLLHELVTQFSPTILKNEGVPVYRAVQNAGEYVLT 389
Query: 315 FPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHKMVILPYQELLF------- 367
FPR YH+GF+ GFNC EAVN A DW G+ A + Y++ + L + ++L
Sbjct: 390 FPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQNAVEIYSQETRKTSLSHDKILLGAAFEAV 449
Query: 368 KEVSEHEGTDIPSS------------VKATVLHQIRSLNNALFCLNN----LKMPFDYLQ 411
K +S H G D + + ++R + L N +KM D+
Sbjct: 450 KSLSAH-GEDNTKRFSWKRFCGKDGIITKAIEARLRMEEKRIEALGNGFSLVKMDKDFDS 508
Query: 412 NSQGSFVCDLCKRDCYLAFTECKSC---QRYTCLFHEFKSRHCSC-GYNRVVLLRKDI 465
N + C C D +L+ T CK+C + Y C H+ CSC G +R + LR I
Sbjct: 509 NCERE--CISCFSDLHLSATGCKNCSSLEEYGCTKHDI----CSCEGKDRFIFLRYTI 560
Score = 244 (91.0 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 67/215 (31%), Positives = 104/215 (48%)
Query: 51 YLQKIAPEASQFGICKIISPVKASVSAADVLKKEIKGFEFGTYRQPLRLPKWNANDTGVF 110
Y + +AP+ + K +S KA+ ++E GFE G + K+ + +
Sbjct: 147 YSRTVAPKKRNGSVSKSVSTPKAT-------EEENFGFESGPEFTLEKFEKYAQDFKDSY 199
Query: 111 FSGERKHTYDTFESEAIKMLKRQSPRLGDLPPSYVEKKFWLEMTHGRKGT-VEYGVNIEG 169
F ERK D +++ ++ + R+ + + V+ + ++ + G+ GV I
Sbjct: 200 F--ERK---DNVGDPSVEEIEGEYWRIIEKETNEVKVLYGTDLENPILGSGFSKGVKIPT 254
Query: 170 SAFSSDPNDQLGKCKWHLKTLRGLPQSIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDH 229
D G W+L L L S+ F + I G+ P LY+GM FS F WHVED+
Sbjct: 255 RRNDMDKYISSG---WNLNNLARLQGSLLSFEDCEISGVQVPWLYVGMCFSTFCWHVEDN 311
Query: 230 YLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQV 264
+L+S+NYHH G PK WYGVPG HA EK R +
Sbjct: 312 HLYSLNYHHFGEPKVWYGVPGSHATGLEKAMRKHL 346
Score = 114 (45.2 bits), Expect = 3.6e-54, Sum P(2) = 3.6e-54
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 32 ISDCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISP 70
I + P ++PT +EF+D Y++KI P A FGIC+I+ P
Sbjct: 58 IGEAPVFHPTSEEFEDTLAYIEKIRPLAESFGICRIVPP 96
>UNIPROTKB|Q9UGL1 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003714 "transcription corepressor activity" evidence=IDA]
[GO:0034647 "histone demethylase activity (H3-trimethyl-K4
specific)" evidence=IDA] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=IDA] [GO:0034720 "histone H3-K4
demethylation" evidence=IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0005634
"nucleus" evidence=TAS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0034721 "histone
H3-K4 demethylation, trimethyl-H3-K4-specific" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GO:GO:0034647 KO:K11446
HOGENOM:HOG000290719 HSSP:Q14839 CTD:10765 OrthoDB:EOG4HT8RC
EMBL:AJ132440 EMBL:AF087481 EMBL:AJ243706 EMBL:AC098934
EMBL:AC104463 IPI:IPI00847436 IPI:IPI00873956 RefSeq:NP_006609.3
UniGene:Hs.443650 ProteinModelPortal:Q9UGL1 SMR:Q9UGL1
DIP:DIP-53652N IntAct:Q9UGL1 STRING:Q9UGL1 PhosphoSite:Q9UGL1
DMDM:296439317 PaxDb:Q9UGL1 PRIDE:Q9UGL1 Ensembl:ENST00000367264
Ensembl:ENST00000367265 GeneID:10765 KEGG:hsa:10765 UCSC:uc001gyf.3
UCSC:uc009xag.3 GeneCards:GC01M202696 H-InvDB:HIX0001478
HGNC:HGNC:18039 HPA:HPA027179 MIM:605393 neXtProt:NX_Q9UGL1
PharmGKB:PA164721626 InParanoid:Q9UGL1 OMA:CENEKEM ChiTaRS:KDM5B
GenomeRNAi:10765 NextBio:40877 ArrayExpress:Q9UGL1 Bgee:Q9UGL1
CleanEx:HS_JARID1B Genevestigator:Q9UGL1 Uniprot:Q9UGL1
Length = 1544
Score = 486 (176.1 bits), Expect = 4.1e-53, Sum P(2) = 4.1e-53
Identities = 129/369 (34%), Positives = 185/369 (50%)
Query: 110 FFSGERKHTYDTFE--SEAIKMLKRQSPRLGDLPPSYVEKKFW-LEMTHGRKGTVEYGVN 166
F R +T TF ++A K P + +P VEK+FW L T TVEYG +
Sbjct: 370 FEQAARDYTLRTFGEMADAFKSDYFNMP-VHMVPTELVEKEFWRLVSTIEEDVTVEYGAD 428
Query: 167 IEGSAFSSDPNDQLGKCK------------WHLKTLRGLPQSIFRFLEHIIPGITDPMLY 214
I F S + GK K W+L + + QS+ + I G+ P LY
Sbjct: 429 IASKEFGSGFPVRDGKIKLSPEEEEYLDSGWNLNNMPVMEQSVLAHITADICGMKLPWLY 488
Query: 215 IGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQVYSRDILSAAG 274
+GM FS F WH+EDH+ +SINY H G PKTWYGVPG+ A Q E V + L +
Sbjct: 489 VGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLENVMKKLAPE---LFVSQ 545
Query: 275 EDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFSNGFNCGEAVN 334
D ++ + TI P L+ + V VY+ Q GEFVITFPR YH+GF+ GFN EAVN
Sbjct: 546 PD----LLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVN 601
Query: 335 FAIRDWFPFGEEAGKRYARLHKMVILPYQELLFKEVSEHEGTDI--PSSVK---ATVLHQ 389
F DW P G + + Y LH+ + + E++ K S+ + D+ S+V+ A ++
Sbjct: 602 FCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLDVVVASTVQKDMAIMIED 661
Query: 390 IRSLNNA---LFCLNNLKMPFDYLQNSQGSFVCDLCKRDCYLAFTECKSCQR--YTCLFH 444
++L L +++ +M F+ L + + C CK C+++ C SC+ CL H
Sbjct: 662 EKALRETVRKLGVIDSERMDFELLPDDERQ--CVKCKTTCFMSAISC-SCKPGLLVCL-H 717
Query: 445 EFKSRHCSC 453
K CSC
Sbjct: 718 HVKEL-CSC 725
Score = 108 (43.1 bits), Expect = 4.1e-53, Sum P(2) = 4.1e-53
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 34 DCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISP 70
+CP + P+ +EF DPF ++ KI P A Q GICK+ P
Sbjct: 31 ECPVFEPSWEEFADPFAFIHKIRPIAEQTGICKVRPP 67
>MGI|MGI:1922855 [details] [associations]
symbol:Kdm5b "lysine (K)-specific demethylase 5B"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=ISO] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=IDA] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=ISO] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=ISO] [GO:0034720 "histone H3-K4
demethylation" evidence=ISO;IDA] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 MGI:MGI:1922855 GO:GO:0003714 GO:GO:0045892
GO:GO:0005730 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GeneTree:ENSGT00530000063118
GO:GO:0034647 KO:K11446 HOGENOM:HOG000290719 CTD:10765
OrthoDB:EOG4HT8RC OMA:CENEKEM EMBL:AY082429 EMBL:AY082430
EMBL:AK220451 EMBL:BC048180 EMBL:BC057318 EMBL:AK041304
IPI:IPI00330824 IPI:IPI00776332 RefSeq:NP_690855.2 UniGene:Mm.28995
UniGene:Mm.391994 PDB:2EQY PDBsum:2EQY ProteinModelPortal:Q80Y84
SMR:Q80Y84 IntAct:Q80Y84 STRING:Q80Y84 PhosphoSite:Q80Y84
PRIDE:Q80Y84 Ensembl:ENSMUST00000047714 Ensembl:ENSMUST00000112198
GeneID:75605 KEGG:mmu:75605 UCSC:uc007csg.2 UCSC:uc011wsg.1
InParanoid:Q80Y84 EvolutionaryTrace:Q80Y84 NextBio:343484
Bgee:Q80Y84 Genevestigator:Q80Y84 Uniprot:Q80Y84
Length = 1544
Score = 486 (176.1 bits), Expect = 4.1e-53, Sum P(2) = 4.1e-53
Identities = 129/369 (34%), Positives = 185/369 (50%)
Query: 110 FFSGERKHTYDTFE--SEAIKMLKRQSPRLGDLPPSYVEKKFW-LEMTHGRKGTVEYGVN 166
F R +T TF ++A K P + +P VEK+FW L T TVEYG +
Sbjct: 370 FEQAARDYTLRTFGEMADAFKSDYFNMP-VHMVPTELVEKEFWRLVSTIEEDVTVEYGAD 428
Query: 167 IEGSAFSSDPNDQLGKCK------------WHLKTLRGLPQSIFRFLEHIIPGITDPMLY 214
I F S + GK K W+L + + QS+ + I G+ P LY
Sbjct: 429 IASKEFGSGFPVRDGKIKISPEEEEYLDSGWNLNNMPVMEQSVLAHITADICGMKLPWLY 488
Query: 215 IGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQVYSRDILSAAG 274
+GM FS F WH+EDH+ +SINY H G PKTWYGVPG+ A Q E V + L +
Sbjct: 489 VGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLENVMKKLAPE---LFVSQ 545
Query: 275 EDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFSNGFNCGEAVN 334
D ++ + TI P L+ + V VY+ Q GEFVITFPR YH+GF+ GFN EAVN
Sbjct: 546 PD----LLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVN 601
Query: 335 FAIRDWFPFGEEAGKRYARLHKMVILPYQELLFKEVSEHEGTDI--PSSVK---ATVLHQ 389
F DW P G + + Y LH+ + + E++ K S+ + D+ S+V+ A ++
Sbjct: 602 FCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLDVVVASTVQKDMAIMIED 661
Query: 390 IRSLNNA---LFCLNNLKMPFDYLQNSQGSFVCDLCKRDCYLAFTECKSCQR--YTCLFH 444
++L L +++ +M F+ L + + C CK C+++ C SC+ CL H
Sbjct: 662 EKALRETVRKLGVIDSERMDFELLPDDERQ--CIKCKTTCFMSAISC-SCKPGLLVCL-H 717
Query: 445 EFKSRHCSC 453
K CSC
Sbjct: 718 HVKEL-CSC 725
Score = 108 (43.1 bits), Expect = 4.1e-53, Sum P(2) = 4.1e-53
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 34 DCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISP 70
+CP + P+ +EF DPF ++ KI P A Q GICK+ P
Sbjct: 31 ECPVFEPSWEEFADPFAFIHKIRPIAEQTGICKVRPP 67
>RGD|1565602 [details] [associations]
symbol:Kdm5b "lysine (K)-specific demethylase 5B" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=ISO] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA;ISO] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=IEA;ISO] [GO:0034720 "histone
H3-K4 demethylation" evidence=ISO] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
RGD:1565602 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063118 GO:GO:0034647
OrthoDB:EOG4HT8RC IPI:IPI00554242 Ensembl:ENSRNOT00000006290
UCSC:RGD:1565602 Uniprot:D3ZUT4
Length = 1546
Score = 486 (176.1 bits), Expect = 4.1e-53, Sum P(2) = 4.1e-53
Identities = 129/369 (34%), Positives = 185/369 (50%)
Query: 110 FFSGERKHTYDTFE--SEAIKMLKRQSPRLGDLPPSYVEKKFW-LEMTHGRKGTVEYGVN 166
F R +T TF ++A K P + +P VEK+FW L T TVEYG +
Sbjct: 372 FEQAARDYTLRTFGEMADAFKSDYFNMP-VHMVPTELVEKEFWRLVSTIEEDVTVEYGAD 430
Query: 167 IEGSAFSSDPNDQLGKCK------------WHLKTLRGLPQSIFRFLEHIIPGITDPMLY 214
I F S + GK K W+L + + QS+ + I G+ P LY
Sbjct: 431 IASKEFGSGFPVRDGKIKISPEEEEYLDSGWNLNNMPVMEQSVLAHITADICGMKLPWLY 490
Query: 215 IGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQVYSRDILSAAG 274
+GM FS F WH+EDH+ +SINY H G PKTWYGVPG+ A Q E V + L +
Sbjct: 491 VGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLENVMKKLAPE---LFVSQ 547
Query: 275 EDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFSNGFNCGEAVN 334
D ++ + TI P L+ + V VY+ Q GEFVITFPR YH+GF+ GFN EAVN
Sbjct: 548 PD----LLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVN 603
Query: 335 FAIRDWFPFGEEAGKRYARLHKMVILPYQELLFKEVSEHEGTDI--PSSVK---ATVLHQ 389
F DW P G + + Y LH+ + + E++ K S+ + D+ S+V+ A ++
Sbjct: 604 FCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLDVVVASTVQKDMAIMIED 663
Query: 390 IRSLNNA---LFCLNNLKMPFDYLQNSQGSFVCDLCKRDCYLAFTECKSCQR--YTCLFH 444
++L L +++ +M F+ L + + C CK C+++ C SC+ CL H
Sbjct: 664 EKALRETVRKLGVIDSERMDFELLPDDERQ--CIKCKTTCFMSAISC-SCKPGLLVCL-H 719
Query: 445 EFKSRHCSC 453
K CSC
Sbjct: 720 HVKEL-CSC 727
Score = 108 (43.1 bits), Expect = 4.1e-53, Sum P(2) = 4.1e-53
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 34 DCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISP 70
+CP + P+ +EF DPF ++ KI P A Q GICK+ P
Sbjct: 31 ECPVFEPSWEEFADPFAFIHKIRPIAEQTGICKVRPP 67
>RGD|1305429 [details] [associations]
symbol:Kdm5a "lysine (K)-specific demethylase 5A" species:10116
"Rattus norvegicus" [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0019907 "cyclin-dependent protein
kinase activating kinase holoenzyme complex" evidence=ISO]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 RGD:1305429 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 HOGENOM:HOG000290719 HOVERGEN:HBG068574
IPI:IPI00781814 EMBL:BC099835 UniGene:Rn.206273 UniGene:Rn.224608
ProteinModelPortal:Q499M6 UCSC:RGD:1305429 InParanoid:Q499M6
Genevestigator:Q499M6 Uniprot:Q499M6
Length = 1099
Score = 492 (178.3 bits), Expect = 6.9e-53, Sum P(2) = 6.9e-53
Identities = 114/337 (33%), Positives = 170/337 (50%)
Query: 140 LPPSYVEKKFWLEMTHGRKGT-VEYGVNIEGSAFSSD-P-----------NDQLGKCKWH 186
+P VEK+FW ++ + VEYG +I F S P ++ W+
Sbjct: 385 VPTELVEKEFWRLVSSIEEDVIVEYGADISSKDFGSGFPIKDGQRKMLPEEEEYALSGWN 444
Query: 187 LKTLRGLPQSIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWY 246
L + L QS+ + I G+ P LY+GM FS F WH+EDH+ +SINY H G PKTWY
Sbjct: 445 LNNMPVLEQSVLAHINVDISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWY 504
Query: 247 GVPGHHALQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQ 306
GVP H A Q E+V R L+ + +++ + TI P +L+++GV VY+ Q
Sbjct: 505 GVPSHAAEQLEEVMRE-------LAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQ 557
Query: 307 KPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHKMVILPYQELL 366
GEFV+TFPR YH+GF+ G+N EAVNF DW P G + Y RL + + ++EL+
Sbjct: 558 CAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELI 617
Query: 367 FKEVSEHEGTDIPSSVKATVLHQIRSLNNALFCLNNLKMPFDYLQNSQGSFV-------- 418
FK ++ E D+ + A V ++ + L + + + + F
Sbjct: 618 FKMAADPECLDV--GLAAMVCKELTLMTEEETRLRESVVQMGVVMSEEEVFELVPDDERQ 675
Query: 419 CDLCKRDCYLAFTECKSC--QRYTCLFHEFKSRHCSC 453
C C+ C+L+ C SC +R CL+H + CSC
Sbjct: 676 CSACRTTCFLSALTC-SCNPERLVCLYHP--TDLCSC 709
Score = 94 (38.1 bits), Expect = 6.9e-53, Sum P(2) = 6.9e-53
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 34 DCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISP 70
+CP + P+ +EF DP ++ +I P A + GICKI P
Sbjct: 18 ECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPP 54
>UNIPROTKB|E9PSW7 [details] [associations]
symbol:Jarid1a "Protein Jarid1a" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 IPI:IPI00781814
Ensembl:ENSRNOT00000056198 OMA:IRTRTRN ArrayExpress:E9PSW7
Uniprot:E9PSW7
Length = 1099
Score = 492 (178.3 bits), Expect = 6.9e-53, Sum P(2) = 6.9e-53
Identities = 114/337 (33%), Positives = 170/337 (50%)
Query: 140 LPPSYVEKKFWLEMTHGRKGT-VEYGVNIEGSAFSSD-P-----------NDQLGKCKWH 186
+P VEK+FW ++ + VEYG +I F S P ++ W+
Sbjct: 385 VPTELVEKEFWRLVSSIEEDVIVEYGADISSKDFGSGFPIKDGQRKMLPEEEEYALSGWN 444
Query: 187 LKTLRGLPQSIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWY 246
L + L QS+ + I G+ P LY+GM FS F WH+EDH+ +SINY H G PKTWY
Sbjct: 445 LNNMPVLEQSVLAHINVDISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWY 504
Query: 247 GVPGHHALQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQ 306
GVP H A Q E+V R L+ + +++ + TI P +L+++GV VY+ Q
Sbjct: 505 GVPSHAAEQLEEVMRE-------LAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQ 557
Query: 307 KPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHKMVILPYQELL 366
GEFV+TFPR YH+GF+ G+N EAVNF DW P G + Y RL + + ++EL+
Sbjct: 558 CAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELI 617
Query: 367 FKEVSEHEGTDIPSSVKATVLHQIRSLNNALFCLNNLKMPFDYLQNSQGSFV-------- 418
FK ++ E D+ + A V ++ + L + + + + F
Sbjct: 618 FKMAADPECLDV--GLAAMVCKELTLMTEEETRLRESVVQMGVVMSEEEVFELVPDDERQ 675
Query: 419 CDLCKRDCYLAFTECKSC--QRYTCLFHEFKSRHCSC 453
C C+ C+L+ C SC +R CL+H + CSC
Sbjct: 676 CSACRTTCFLSALTC-SCNPERLVCLYHP--TDLCSC 709
Score = 94 (38.1 bits), Expect = 6.9e-53, Sum P(2) = 6.9e-53
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 34 DCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISP 70
+CP + P+ +EF DP ++ +I P A + GICKI P
Sbjct: 18 ECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPP 54
>UNIPROTKB|F1MQ59 [details] [associations]
symbol:KDM5A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019907 "cyclin-dependent protein kinase activating kinase
holoenzyme complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005737 GO:GO:0045893
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003682
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 OMA:ECSKPRE EMBL:DAAA02014587
IPI:IPI00715082 Ensembl:ENSBTAT00000027280 Uniprot:F1MQ59
Length = 1693
Score = 496 (179.7 bits), Expect = 1.1e-52, Sum P(2) = 1.1e-52
Identities = 117/337 (34%), Positives = 170/337 (50%)
Query: 140 LPPSYVEKKFWLEMTHGRKGT-VEYGVNIEGSAFSSDPNDQLGKCK------------WH 186
+P VEK+FW ++ + VEYG +I F S + G+ K W+
Sbjct: 385 VPTELVEKEFWRLVSSIEEDVIVEYGADISSKDFGSGFPVKDGRRKMLPEEEEYALSGWN 444
Query: 187 LKTLRGLPQSIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWY 246
L + L QS+ + I G+ P LY+GM FS F WH+EDH+ +SINY H G PKTWY
Sbjct: 445 LNNMPVLEQSVLAHINVDISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWY 504
Query: 247 GVPGHHALQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQ 306
GVP H A Q E+V R L+ + +++ + TI P +L+++GV VY+ Q
Sbjct: 505 GVPSHAAEQLEEVMRE-------LAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQ 557
Query: 307 KPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHKMVILPYQELL 366
GEFV+TFPR YH+GF+ G+N EAVNF DW P G + Y RL + + ++EL+
Sbjct: 558 CAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGRQCVSHYRRLRRHCVFSHEELI 617
Query: 367 FKEVSEHEGTDIPSSVKATVLHQIRSLNNALFCLNNLKMPFDYLQNSQGSFV-------- 418
FK ++ E D+ + A V ++ L L M L + + F
Sbjct: 618 FKMAADPECLDV--GLAAMVCKELTLLTEEETRLRESVMQMGVLMSEEEVFELVPDDERQ 675
Query: 419 CDLCKRDCYLAFTECKSC--QRYTCLFHEFKSRHCSC 453
C C+ C+L+ C SC +R CL+H + C C
Sbjct: 676 CSACRTTCFLSALTC-SCNPERLVCLYHP--TDLCPC 709
Score = 95 (38.5 bits), Expect = 1.1e-52, Sum P(2) = 1.1e-52
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 34 DCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISP 70
+CP + P+ +EF DP ++ +I P A + GICKI P
Sbjct: 18 ECPVFEPSWEEFTDPLSFIGRIRPMAEKTGICKIRPP 54
>MGI|MGI:2136980 [details] [associations]
symbol:Kdm5a "lysine (K)-specific demethylase 5A"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
MGI:MGI:2136980 GO:GO:0007275 GO:GO:0005737 GO:GO:0045893
GO:GO:0005730 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 GO:GO:0016706
GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
eggNOG:NOG327026 GeneTree:ENSGT00530000063118 KO:K11446 CTD:5927
HOGENOM:HOG000290719 OMA:ECSKPRE ChiTaRS:KDM5A EMBL:AC155720
EMBL:AC078896 EMBL:AK135085 EMBL:AK144877 EMBL:AK166055
EMBL:BC080691 IPI:IPI00849089 RefSeq:NP_666109.2 UniGene:Mm.404761
UniGene:Mm.463658 ProteinModelPortal:Q3UXZ9 SMR:Q3UXZ9
IntAct:Q3UXZ9 STRING:Q3UXZ9 PhosphoSite:Q3UXZ9 PaxDb:Q3UXZ9
PRIDE:Q3UXZ9 Ensembl:ENSMUST00000100996 GeneID:214899
KEGG:mmu:214899 UCSC:uc009dne.2 InParanoid:Q3UXZ9 NextBio:374501
Bgee:Q3UXZ9 CleanEx:MM_RBP2 Genevestigator:Q3UXZ9 Uniprot:Q3UXZ9
Length = 1690
Score = 493 (178.6 bits), Expect = 3.0e-52, Sum P(2) = 3.0e-52
Identities = 115/337 (34%), Positives = 171/337 (50%)
Query: 140 LPPSYVEKKFWLEMTHGRKGT-VEYGVNIEGSAFSSDPNDQLGKCK------------WH 186
+P VEK+FW ++ + VEYG +I F S + G+ K W+
Sbjct: 385 VPTELVEKEFWRLVSSIEEDVIVEYGADISSKDFGSGFPKKDGQRKMLPEEEEYALSGWN 444
Query: 187 LKTLRGLPQSIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWY 246
L + L QS+ + I G+ P LY+GM FS F WH+EDH+ +SINY H G PKTWY
Sbjct: 445 LNNMPVLEQSVLAHINVDISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWY 504
Query: 247 GVPGHHALQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQ 306
GVP H A Q E+V R L+ + +++ + TI P +L+++GV VY+ Q
Sbjct: 505 GVPSHAAEQLEEVMRE-------LAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQ 557
Query: 307 KPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHKMVILPYQELL 366
GEFV+TFPR YH+GF+ G+N EAVNF DW P G + Y RL + + ++EL+
Sbjct: 558 CAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELI 617
Query: 367 FKEVSEHEGTDIPSSVKATVLHQIRSLNNALFCLNNLKMPFDYLQNSQGSFV-------- 418
FK ++ E D+ + A V ++ + L + + + + F
Sbjct: 618 FKMAADPECLDV--GLAAMVCKELTLMTEEETRLRESVVQMGVVMSEEEVFELVPDDERQ 675
Query: 419 CDLCKRDCYLAFTECKSC--QRYTCLFHEFKSRHCSC 453
C C+ C+L+ C SC +R CL+H + CSC
Sbjct: 676 CSACRTTCFLSALTC-SCNPERLVCLYHP--TDLCSC 709
Score = 94 (38.1 bits), Expect = 3.0e-52, Sum P(2) = 3.0e-52
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 34 DCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISP 70
+CP + P+ +EF DP ++ +I P A + GICKI P
Sbjct: 18 ECPVFEPSWEEFTDPLSFIGRIRPFAEKTGICKIRPP 54
>ASPGD|ASPL0000010243 [details] [associations]
symbol:AN8211 species:162425 "Emericella nidulans"
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0031934 "mating-type
region heterochromatin" evidence=IEA] [GO:0048189 "Lid2 complex"
evidence=IEA] [GO:0031618 "nuclear centromeric heterochromatin"
evidence=IEA] [GO:0034647 "histone demethylase activity
(H3-trimethyl-K4 specific)" evidence=IEA] [GO:0000070 "mitotic
sister chromatid segregation" evidence=IEA] [GO:0030466 "chromatin
silencing at silent mating-type cassette" evidence=IEA] [GO:0034630
"RITS complex localization" evidence=IEA] [GO:0031507
"heterochromatin assembly" evidence=IEA] [GO:0051572 "negative
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0051567
"histone H3-K9 methylation" evidence=IEA] [GO:0030702 "chromatin
silencing at centromere" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 EMBL:BN001302 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 OrthoDB:EOG44N21B KO:K11446
EMBL:AACD01000143 RefSeq:XP_681480.1 ProteinModelPortal:Q5AU19
EnsemblFungi:CADANIAT00004258 GeneID:2869040 KEGG:ani:AN8211.2
HOGENOM:HOG000160061 OMA:HFGATKT Uniprot:Q5AU19
Length = 1717
Score = 437 (158.9 bits), Expect = 3.4e-52, Sum P(3) = 3.4e-52
Identities = 99/232 (42%), Positives = 129/232 (55%)
Query: 145 VEKKFWLEMTHGRKGTVE--YGVNIE----GSAFSS---DPNDQLGKCKWHLKTLRGLPQ 195
VE++FW + TVE YG +I GS F + +P D K W+L L +
Sbjct: 554 VEREFW-RLVESLTETVEVEYGADIHSTTHGSGFPTVERNPLDPYSKDPWNLNNLPFHGE 612
Query: 196 SIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQ 255
S+FR ++ I G+T P +Y+GM FS F WH EDHY +S NY H GA KTWYG+PG A
Sbjct: 613 SLFRHIKSDISGMTVPWVYVGMCFSTFCWHNEDHYAYSANYQHFGATKTWYGIPGADAEA 672
Query: 256 FEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITF 315
FE+ R V L D F+++ T+ PP L GV+VY Q+ G+FVITF
Sbjct: 673 FEEAMRQAVPE---LFEGQPDLLFQLV----TLMPPDQLRKAGVNVYALDQRAGQFVITF 725
Query: 316 PRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHKMVILPYQELLF 367
P+ YHAGF++GFN EAVNFA DW PFG +R + + ELLF
Sbjct: 726 PQAYHAGFNHGFNFNEAVNFAPVDWEPFGAAGVERLQAFRRHPCFSHDELLF 777
Score = 127 (49.8 bits), Expect = 3.4e-52, Sum P(3) = 3.4e-52
Identities = 28/68 (41%), Positives = 39/68 (57%)
Query: 30 HKISDCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISPVKASVSAADVLKKEIKGFE 89
H + + P + PT +EF DP Y++KIAPE ++GIC+II P + A +K F
Sbjct: 70 HGLQEAPTFRPTEEEFRDPEAYIRKIAPEGKKYGICRIIPPENWQPTFAIDTEK----FH 125
Query: 90 FGTYRQPL 97
F T RQ L
Sbjct: 126 FKTRRQEL 133
Score = 49 (22.3 bits), Expect = 3.4e-52, Sum P(3) = 3.4e-52
Identities = 11/38 (28%), Positives = 16/38 (42%)
Query: 417 FVCDLCKRDCYLAFTECKSCQRYTCLFHEFKSRHCSCG 454
+ C CK +L +C + CL H + C CG
Sbjct: 851 YQCHYCKAYIFLTQFKCHKSGKTLCLVH-LDAHDC-CG 886
Score = 42 (19.8 bits), Expect = 1.8e-51, Sum P(3) = 1.8e-51
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 419 CDLCKR----DCY-LAFTECKSCQRYTCLFHEFKSR 449
C++C C +A + K C +YTC +++ +
Sbjct: 1337 CEICGEWYHGKCLKIARGKVKECDKYTCPICDWRQK 1372
>UNIPROTKB|E9PSM3 [details] [associations]
symbol:Jarid1a "Protein Jarid1a" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005737 GO:GO:0045893 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003682 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 IPI:IPI00365351
Ensembl:ENSRNOT00000034548 NextBio:665124 ArrayExpress:E9PSM3
Uniprot:E9PSM3
Length = 1690
Score = 492 (178.3 bits), Expect = 3.8e-52, Sum P(2) = 3.8e-52
Identities = 114/337 (33%), Positives = 170/337 (50%)
Query: 140 LPPSYVEKKFWLEMTHGRKGT-VEYGVNIEGSAFSSD-P-----------NDQLGKCKWH 186
+P VEK+FW ++ + VEYG +I F S P ++ W+
Sbjct: 385 VPTELVEKEFWRLVSSIEEDVIVEYGADISSKDFGSGFPIKDGQRKMLPEEEEYALSGWN 444
Query: 187 LKTLRGLPQSIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWY 246
L + L QS+ + I G+ P LY+GM FS F WH+EDH+ +SINY H G PKTWY
Sbjct: 445 LNNMPVLEQSVLAHINVDISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWY 504
Query: 247 GVPGHHALQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQ 306
GVP H A Q E+V R L+ + +++ + TI P +L+++GV VY+ Q
Sbjct: 505 GVPSHAAEQLEEVMRE-------LAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQ 557
Query: 307 KPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHKMVILPYQELL 366
GEFV+TFPR YH+GF+ G+N EAVNF DW P G + Y RL + + ++EL+
Sbjct: 558 CAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELI 617
Query: 367 FKEVSEHEGTDIPSSVKATVLHQIRSLNNALFCLNNLKMPFDYLQNSQGSFV-------- 418
FK ++ E D+ + A V ++ + L + + + + F
Sbjct: 618 FKMAADPECLDV--GLAAMVCKELTLMTEEETRLRESVVQMGVVMSEEEVFELVPDDERQ 675
Query: 419 CDLCKRDCYLAFTECKSC--QRYTCLFHEFKSRHCSC 453
C C+ C+L+ C SC +R CL+H + CSC
Sbjct: 676 CSACRTTCFLSALTC-SCNPERLVCLYHP--TDLCSC 709
Score = 94 (38.1 bits), Expect = 3.8e-52, Sum P(2) = 3.8e-52
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 34 DCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISP 70
+CP + P+ +EF DP ++ +I P A + GICKI P
Sbjct: 18 ECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPP 54
>UNIPROTKB|E7EV89 [details] [associations]
symbol:KDM5A "Lysine-specific demethylase 5A" species:9606
"Homo sapiens" [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS51184
SMART:SM00558 GO:GO:0005634 GO:GO:0005737 GO:GO:0016706
EMBL:AC005844 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:AC007406 HGNC:HGNC:9886 ChiTaRS:KDM5A
IPI:IPI00909864 ProteinModelPortal:E7EV89 SMR:E7EV89 PRIDE:E7EV89
Ensembl:ENST00000544760 ArrayExpress:E7EV89 Bgee:E7EV89
Uniprot:E7EV89
Length = 715
Score = 468 (169.8 bits), Expect = 3.9e-52, Sum P(2) = 3.9e-52
Identities = 100/279 (35%), Positives = 147/279 (52%)
Query: 185 WHLKTLRGLPQSIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKT 244
W+L + L QS+ + I G+ P LY+GM FS F WH+EDH+ +SINY H G PKT
Sbjct: 62 WNLNNMPVLEQSVLAHINVDISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKT 121
Query: 245 WYGVPGHHALQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKA 304
WYGVP H A Q E+V R L+ + +++ + TI P +L+++GV VY+
Sbjct: 122 WYGVPSHAAEQLEEVMRE-------LAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRT 174
Query: 305 VQKPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHKMVILPYQE 364
Q GEFV+TFPR YH+GF+ G+N EAVNF DW P G + Y RL + + ++E
Sbjct: 175 NQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEE 234
Query: 365 LLFKEVSEHEGTDIPSSVKATVLHQIRSLNNALFCLNNLKMPFDYLQNSQGSFV------ 418
L+FK ++ E D+ + A V ++ + L + L + + F
Sbjct: 235 LIFKMAADPECLDV--GLAAMVCKELTLMTEEETRLRESVVQMGVLMSEEEVFELVPDDE 292
Query: 419 --CDLCKRDCYLAFTECKSC--QRYTCLFHEFKSRHCSC 453
C C+ C+L+ C SC +R CL+H + C C
Sbjct: 293 RQCSACRTTCFLSALTC-SCNPERLVCLYHP--TDLCPC 328
Score = 97 (39.2 bits), Expect = 3.9e-52, Sum P(2) = 3.9e-52
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 34 DCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISPVKASVS 76
+CP + P+ +EF DP ++ +I P A + GICKI P + ++S
Sbjct: 18 ECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPPKEYALS 60
>UNIPROTKB|F1Q4J4 [details] [associations]
symbol:KDM5A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 KO:K11446 CTD:5927 OMA:ECSKPRE
EMBL:AAEX03015319 EMBL:AAEX03015320 RefSeq:XP_854690.3
Ensembl:ENSCAFT00000025008 GeneID:477727 KEGG:cfa:477727
Uniprot:F1Q4J4
Length = 1688
Score = 491 (177.9 bits), Expect = 4.8e-52, Sum P(2) = 4.8e-52
Identities = 116/337 (34%), Positives = 170/337 (50%)
Query: 140 LPPSYVEKKFWLEMTHGRKGT-VEYGVNIEGSAFSSDPNDQLGKCK------------WH 186
+P VEK+FW ++ + VEYG +I F S + G+ K W+
Sbjct: 385 VPTELVEKEFWRLVSSIEEDVIVEYGADISSKDFGSGFPVKDGRRKMLPEEEEYALSGWN 444
Query: 187 LKTLRGLPQSIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWY 246
L + L QS+ + I G+ P LY+GM FS F WH+EDH+ +SINY H G PKTWY
Sbjct: 445 LNNMPVLEQSVLAHINVDISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWY 504
Query: 247 GVPGHHALQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQ 306
GVP H A Q E+V R L+ + +++ + TI P IL+++GV VY+ Q
Sbjct: 505 GVPSHAAEQLEEVMRE-------LAPELFESQPDLLHQLVTIMNPNILMEHGVPVYRTNQ 557
Query: 307 KPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHKMVILPYQELL 366
GEFV+TFPR YH+GF+ G+N EAVNF DW P G + Y RL + + ++EL+
Sbjct: 558 CAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELI 617
Query: 367 FKEVSEHEGTDIPSSVKATVLHQIRSLNNALFCLNNLKMPFDYLQNSQGSFV-------- 418
FK ++ E D+ + A V ++ + L + L + + F
Sbjct: 618 FKMAADPECLDV--GLAAMVCKELTLMTEEETRLRESVVQMGVLMSEEEVFELVPDDERQ 675
Query: 419 CDLCKRDCYLAFTECKSC--QRYTCLFHEFKSRHCSC 453
C C+ C+L+ C SC +R CL+H + C C
Sbjct: 676 CSACRTTCFLSALTC-SCNPERLVCLYHP--NDLCPC 709
Score = 94 (38.1 bits), Expect = 4.8e-52, Sum P(2) = 4.8e-52
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 34 DCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISP 70
+CP + P+ +EF DP ++ +I P A + GICKI P
Sbjct: 18 ECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPP 54
>UNIPROTKB|F5H1F7 [details] [associations]
symbol:KDM5A "Lysine-specific demethylase 5A" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 EMBL:AC005844
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
EMBL:AC007406 HGNC:HGNC:9886 ChiTaRS:KDM5A IPI:IPI01018722
ProteinModelPortal:F5H1F7 SMR:F5H1F7 Ensembl:ENST00000382815
ArrayExpress:F5H1F7 Bgee:F5H1F7 Uniprot:F5H1F7
Length = 1636
Score = 490 (177.5 bits), Expect = 5.6e-52, Sum P(2) = 5.6e-52
Identities = 115/337 (34%), Positives = 170/337 (50%)
Query: 140 LPPSYVEKKFWLEMTHGRKGT-VEYGVNIEGSAFSSDPNDQLGKCK------------WH 186
+P VEK+FW ++ + VEYG +I F S + G+ K W+
Sbjct: 385 VPTELVEKEFWRLVSSIEEDVIVEYGADISSKDFGSGFPVKDGRRKILPEEEEYALSGWN 444
Query: 187 LKTLRGLPQSIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWY 246
L + L QS+ + I G+ P LY+GM FS F WH+EDH+ +SINY H G PKTWY
Sbjct: 445 LNNMPVLEQSVLAHINVDISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWY 504
Query: 247 GVPGHHALQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQ 306
GVP H A Q E+V R L+ + +++ + TI P +L+++GV VY+ Q
Sbjct: 505 GVPSHAAEQLEEVMRE-------LAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQ 557
Query: 307 KPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHKMVILPYQELL 366
GEFV+TFPR YH+GF+ G+N EAVNF DW P G + Y RL + + ++EL+
Sbjct: 558 CAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELI 617
Query: 367 FKEVSEHEGTDIPSSVKATVLHQIRSLNNALFCLNNLKMPFDYLQNSQGSFV-------- 418
FK ++ E D+ + A V ++ + L + L + + F
Sbjct: 618 FKMAADPECLDV--GLAAMVCKELTLMTEEETRLRESVVQMGVLMSEEEVFELVPDDERQ 675
Query: 419 CDLCKRDCYLAFTECKSC--QRYTCLFHEFKSRHCSC 453
C C+ C+L+ C SC +R CL+H + C C
Sbjct: 676 CSACRTTCFLSALTC-SCNPERLVCLYHP--TDLCPC 709
Score = 94 (38.1 bits), Expect = 5.6e-52, Sum P(2) = 5.6e-52
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 34 DCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISP 70
+CP + P+ +EF DP ++ +I P A + GICKI P
Sbjct: 18 ECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPP 54
>UNIPROTKB|P29375 [details] [associations]
symbol:KDM5A "Lysine-specific demethylase 5A" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0019907 "cyclin-dependent
protein kinase activating kinase holoenzyme complex" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0007275 GO:GO:0005634 GO:GO:0005737 GO:GO:0045893
GO:GO:0005730 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0003700 GO:GO:0003682 GO:GO:0016568 GO:GO:0006366
GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 EMBL:AC005844
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
EMBL:AC007406 eggNOG:NOG327026 KO:K11446 EMBL:S66431 EMBL:AB209999
EMBL:BC048307 EMBL:BC053893 EMBL:BC110916 IPI:IPI00021363
IPI:IPI01014284 PIR:I78879 RefSeq:NP_001036068.1 UniGene:Hs.76272
PDB:2JXJ PDB:2KGG PDB:2KGI PDB:3GL6 PDBsum:2JXJ PDBsum:2KGG
PDBsum:2KGI PDBsum:3GL6 ProteinModelPortal:P29375 SMR:P29375
DIP:DIP-472N IntAct:P29375 STRING:P29375 PhosphoSite:P29375
DMDM:215274124 PaxDb:P29375 PRIDE:P29375 Ensembl:ENST00000399788
GeneID:5927 KEGG:hsa:5927 UCSC:uc001qif.1 CTD:5927
GeneCards:GC12M000389 H-InvDB:HIX0010308 HGNC:HGNC:9886
HPA:HPA006201 MIM:180202 neXtProt:NX_P29375 PharmGKB:PA34250
HOGENOM:HOG000290719 OMA:ECSKPRE OrthoDB:EOG4GB758 ChiTaRS:KDM5A
EvolutionaryTrace:P29375 GenomeRNAi:5927 NextBio:23088
ArrayExpress:P29375 Bgee:P29375 CleanEx:HS_JARID1A CleanEx:HS_RBP2
Genevestigator:P29375 GermOnline:ENSG00000073614 Uniprot:P29375
Length = 1690
Score = 490 (177.5 bits), Expect = 6.2e-52, Sum P(2) = 6.2e-52
Identities = 115/337 (34%), Positives = 170/337 (50%)
Query: 140 LPPSYVEKKFWLEMTHGRKGT-VEYGVNIEGSAFSSDPNDQLGKCK------------WH 186
+P VEK+FW ++ + VEYG +I F S + G+ K W+
Sbjct: 385 VPTELVEKEFWRLVSSIEEDVIVEYGADISSKDFGSGFPVKDGRRKILPEEEEYALSGWN 444
Query: 187 LKTLRGLPQSIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWY 246
L + L QS+ + I G+ P LY+GM FS F WH+EDH+ +SINY H G PKTWY
Sbjct: 445 LNNMPVLEQSVLAHINVDISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWY 504
Query: 247 GVPGHHALQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQ 306
GVP H A Q E+V R L+ + +++ + TI P +L+++GV VY+ Q
Sbjct: 505 GVPSHAAEQLEEVMRE-------LAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQ 557
Query: 307 KPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHKMVILPYQELL 366
GEFV+TFPR YH+GF+ G+N EAVNF DW P G + Y RL + + ++EL+
Sbjct: 558 CAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELI 617
Query: 367 FKEVSEHEGTDIPSSVKATVLHQIRSLNNALFCLNNLKMPFDYLQNSQGSFV-------- 418
FK ++ E D+ + A V ++ + L + L + + F
Sbjct: 618 FKMAADPECLDV--GLAAMVCKELTLMTEEETRLRESVVQMGVLMSEEEVFELVPDDERQ 675
Query: 419 CDLCKRDCYLAFTECKSC--QRYTCLFHEFKSRHCSC 453
C C+ C+L+ C SC +R CL+H + C C
Sbjct: 676 CSACRTTCFLSALTC-SCNPERLVCLYHP--TDLCPC 709
Score = 94 (38.1 bits), Expect = 6.2e-52, Sum P(2) = 6.2e-52
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 34 DCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISP 70
+CP + P+ +EF DP ++ +I P A + GICKI P
Sbjct: 18 ECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPP 54
>TAIR|locus:2128659 [details] [associations]
symbol:JMJ14 "JUMONJI 14" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0032453 "histone demethylase activity (H3-K4 specific)"
evidence=IDA] [GO:0048573 "photoperiodism, flowering" evidence=IMP]
[GO:0009910 "negative regulation of flower development"
evidence=IMP] [GO:0034720 "histone H3-K4 demethylation"
evidence=IMP] [GO:0010216 "maintenance of DNA methylation"
evidence=IMP] [GO:0043687 "post-translational protein modification"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR003347 InterPro:IPR003888
InterPro:IPR003889 InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928
Pfam:PF05964 Pfam:PF05965 PROSITE:PS51184 PROSITE:PS51542
PROSITE:PS51543 SMART:SM00541 SMART:SM00542 SMART:SM00558
GO:GO:0005654 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003700
GO:GO:0006351 GO:GO:0016702 GO:GO:0009910 GO:GO:0048573
EMBL:AL161553 EMBL:AL080253 GO:GO:0010216 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
GO:GO:0032453 EMBL:BT002486 EMBL:BT010548 IPI:IPI00516310
IPI:IPI00656704 PIR:T10582 RefSeq:NP_001031681.1 RefSeq:NP_193773.2
UniGene:At.43482 ProteinModelPortal:Q8GUI6 SMR:Q8GUI6 IntAct:Q8GUI6
PaxDb:Q8GUI6 PRIDE:Q8GUI6 EnsemblPlants:AT4G20400.1 GeneID:827788
KEGG:ath:AT4G20400 TAIR:At4g20400 HOGENOM:HOG000241335
InParanoid:Q8GUI6 KO:K11446 OMA:VQRSGEF PhylomeDB:Q8GUI6
ProtClustDB:CLSN2679960 Genevestigator:Q8GUI6 Uniprot:Q8GUI6
Length = 954
Score = 451 (163.8 bits), Expect = 1.3e-51, Sum P(2) = 1.3e-51
Identities = 124/369 (33%), Positives = 186/369 (50%)
Query: 131 KRQSPRLGDLPPSYVEKKFWLEMTHGRKGT-VEYGVNIE----GSAFSS-DPN------D 178
K+ P++ DL E ++W + V YG ++E GS F P D
Sbjct: 208 KKFKPKVKDL-----EGEYWRIVEQATDEVEVYYGADLETKKFGSGFPKYKPGYPISEAD 262
Query: 179 QLGKCKWHLKTLRGLPQSIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHH 238
Q +C W+L L LP S+ F I G+ P LY+GM FS F WHVEDH+L+S+NY H
Sbjct: 263 QYSQCGWNLNNLSRLPGSVLAFESCDISGVIVPWLYVGMCFSTFCWHVEDHHLYSMNYLH 322
Query: 239 SGAPKTWYGVPGHHALQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNG 298
+G PK WYG+PG+HA FE V + ++ D+ E+ +++ + T P+IL + G
Sbjct: 323 TGDPKVWYGIPGNHAESFENVMKKRL--PDLF----EEQP-DLLHQLVTQLSPRILKEEG 375
Query: 299 VSVYKAVQKPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHKMV 358
V VY+AVQ+ GEF++TFP+ YH+GF+ GFNC EAVN A DW G+ A + Y++ +
Sbjct: 376 VPVYRAVQRSGEFILTFPKAYHSGFNCGFNCAEAVNVAPVDWLVHGQNAVEGYSKQRRKS 435
Query: 359 ILPYQELLFKEVSEHEGT--DIPSSVKAT-VLHQIRSL--NNALFC-------------L 400
L + +LL E ++ S K T V+ + + + + L L
Sbjct: 436 SLSHDKLLLGAAMEATYCLWELSLSKKKTPVIARWKRVCSEDGLLTKAVKKRVQMEEERL 495
Query: 401 NNLKMPFDYLQNSQGSF------VCDLCKRDCYLAFTECKSCQRYTCLFHEFKSRHCSC- 453
N+L+ F L+ +G F C LC D +++ + CK K CSC
Sbjct: 496 NHLQDGFS-LRKMEGDFDNKRERECFLCFYDLHMSASSCKCSPNRFACLIHAKDL-CSCE 553
Query: 454 GYNRVVLLR 462
+R +L+R
Sbjct: 554 SKDRYILIR 562
Score = 121 (47.7 bits), Expect = 1.3e-51, Sum P(2) = 1.3e-51
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 32 ISDCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISPV 71
+ D P +YPT ++FDDP Y++K+ +A +GIC+I+ PV
Sbjct: 53 VDDAPIFYPTNEDFDDPLGYIEKLRSKAESYGICRIVPPV 92
>UNIPROTKB|F1S4N3 [details] [associations]
symbol:KDM5B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0034648 "histone demethylase
activity (H3-dimethyl-K4 specific)" evidence=IEA] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 GO:GO:0034647 OMA:CENEKEM
EMBL:CU986276 Ensembl:ENSSSCT00000011960 Uniprot:F1S4N3
Length = 1304
Score = 479 (173.7 bits), Expect = 1.8e-51, Sum P(2) = 1.8e-51
Identities = 128/369 (34%), Positives = 184/369 (49%)
Query: 110 FFSGERKHTYDTFE--SEAIKMLKRQSPRLGDLPPSYVEKKFW-LEMTHGRKGTVEYGVN 166
F R +T TF ++A K P + +P VEK+FW L T TVEYG +
Sbjct: 369 FEQAARDYTLRTFGEMADAFKSDYFNMP-VHMVPTELVEKEFWRLVSTIEEDVTVEYGAD 427
Query: 167 IEGSAFSSDPNDQLGKCK------------WHLKTLRGLPQSIFRFLEHIIPGITDPMLY 214
I F S + GK K W+L + + QS+ + I G+ P LY
Sbjct: 428 IASKEFGSGFPVRDGKVKLSPEEEEYLDSGWNLNNMPVMEQSVLAHITADICGMKLPWLY 487
Query: 215 IGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQVYSRDILSAAG 274
+GM FS F WH+EDH+ +SINY H G PKTWYGVPG A Q E V + L +
Sbjct: 488 VGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGFAAEQLEAVMKRLAPE---LFVSQ 544
Query: 275 EDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFSNGFNCGEAVN 334
D ++ + TI P L+ + V VY+ Q GEFVITFPR YH+GF+ GFN EAVN
Sbjct: 545 PD----LLHQLVTIMNPNTLMTHQVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVN 600
Query: 335 FAIRDWFPFGEEAGKRYARLHKMVILPYQELLFKEVSEHEGTDI--PSSVK---ATVLHQ 389
F DW P G + + Y LH+ + + E++ + S+ + D+ S+V+ A ++
Sbjct: 601 FCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICRMASKADVLDVVVASTVQKDMAIMIED 660
Query: 390 IRSLNNA---LFCLNNLKMPFDYLQNSQGSFVCDLCKRDCYLAFTECKSCQR--YTCLFH 444
++L L +++ +M F+ L + + C CK C+++ C SC+ CL H
Sbjct: 661 EKALRETVRKLGVIDSERMDFELLPDDERQ--CVKCKTTCFMSAISC-SCKPGLLVCL-H 716
Query: 445 EFKSRHCSC 453
K CSC
Sbjct: 717 HVKEL-CSC 724
Score = 97 (39.2 bits), Expect = 1.8e-51, Sum P(2) = 1.8e-51
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 34 DCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISP 70
+CP + P+ EF DPF ++ KI P A Q GICK+ P
Sbjct: 31 ECPVFEPSW-EFADPFAFIHKIRPIAEQTGICKVRPP 66
>ZFIN|ZDB-GENE-060810-94 [details] [associations]
symbol:kdm5c "lysine (K)-specific demethylase 5C"
species:7955 "Danio rerio" [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
ZFIN:ZDB-GENE-060810-94 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0043524 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063118 KO:K11446
HOGENOM:HOG000290719 CTD:8242 OMA:ISWQGRA HOVERGEN:HBG068574
EMBL:BX537348 IPI:IPI00611775 RefSeq:NP_001116706.1
UniGene:Dr.75967 SMR:B0S6L0 Ensembl:ENSDART00000098657
Ensembl:ENSDART00000127053 GeneID:553406 KEGG:dre:553406
NextBio:20880164 Uniprot:B0S6L0
Length = 1578
Score = 476 (172.6 bits), Expect = 4.5e-51, Sum P(2) = 4.5e-51
Identities = 122/364 (33%), Positives = 183/364 (50%)
Query: 120 DTFESEAIKMLKRQSPRLGDLPPSYVEKKFW-LEMTHGRKGTVEYGVNIE----GSAFS- 173
DTF+++ M P + +P VEK+FW L + TVEYG +I GS F
Sbjct: 436 DTFKADYFNM-----P-VHMVPTELVEKEFWRLVSSIEEDVTVEYGADIHSKEFGSGFPV 489
Query: 174 -------SDPNDQLGKCKWHLKTLRGLPQSIFRFLEHIIPGITDPMLYIGMLFSMFAWHV 226
S+ ++ + W+L + L QS+ + I G+ P LY+GM+FS F WH+
Sbjct: 490 NNGKRQLSEEEEEYARSGWNLNVMPVLEQSLLCHINADISGMKVPWLYVGMVFSAFCWHI 549
Query: 227 EDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQVYSRDILSAAGEDGAFEVIAEKT 286
EDH+ +SINY H G PKTWYGVP A + E+V + + ++ + ++ +
Sbjct: 550 EDHWSYSINYLHWGEPKTWYGVPCSAAEKLEEVMKK--LTPELFEFQPD-----LLHQLV 602
Query: 287 TIFPPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEE 346
TI P IL+ +GV V + Q GEFVITFPR YH+GF+ G+N EAVNF DW P G
Sbjct: 603 TIMNPNILMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPTGRS 662
Query: 347 AGKRYARLHKMVILPYQELLFKEVSEHEGTDIPSSVKAT------VLHQIRSLNNALF-- 398
+ Y +L + + +EL K + E D+ + AT ++ + R L +L
Sbjct: 663 CIEHYRQLRRYCVFSQEELTCKMAACPEKLDL-NLAAATHREMFIIVQEERKLRKSLLER 721
Query: 399 -CLNNLKMPFDYLQNSQGSFVCDLCKRDCYLAFTECKSC-QRYTCLFHEFKSRHCSCGYN 456
+ F+ L + + CD CK C+L+ C +C +R CL+H CSC
Sbjct: 722 GIKEAEREAFELLPDDERQ--CDKCKTTCFLSALACSNCPERLVCLYHA--QDLCSCPSE 777
Query: 457 RVVL 460
++ L
Sbjct: 778 KLYL 781
Score = 99 (39.9 bits), Expect = 4.5e-51, Sum P(2) = 4.5e-51
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 34 DCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISP 70
+CP + P+ +EF DP Y+ KI P A + GICKI P
Sbjct: 13 ECPVFEPSWEEFADPLGYIAKIRPIAEKSGICKIRPP 49
>DICTYBASE|DDB_G0268778 [details] [associations]
symbol:rbbB "putative Retinoblastoma (Rb) binding
protein" species:44689 "Dictyostelium discoideum" [GO:0005622
"intracellular" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] InterPro:IPR001606 InterPro:IPR003347
Pfam:PF01388 Pfam:PF02373 PROSITE:PS51011 PROSITE:PS51184
SMART:SM00558 dictyBase:DDB_G0268778 GO:GO:0005634
GenomeReviews:CM000150_GR GO:GO:0003677 GO:GO:0003700
EMBL:AAFI02000004 GO:GO:0006366 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
eggNOG:NOG327026 RefSeq:XP_646956.1 ProteinModelPortal:Q55ER4
EnsemblProtists:DDB0220639 GeneID:8616646 KEGG:ddi:DDB_G0268778
InParanoid:Q55ER4 OMA:ENEFWRI Uniprot:Q55ER4
Length = 1198
Score = 541 (195.5 bits), Expect = 4.8e-51, P = 4.8e-51
Identities = 128/340 (37%), Positives = 186/340 (54%)
Query: 110 FFSGERKHTYDTFESEAIKMLKRQSPRLGDLPPSYVEKKFWLEMTHGRKGT-VEYGVNIE 168
F+ G ++ + FE A K+ P G+ P+ VE +FW + +G + V YG +++
Sbjct: 646 FYEGNT-YSLEEFEILAANFSKKWFPD-GNNDPNTVENEFWRIVENGDENVQVHYGSDLD 703
Query: 169 ----GSAFSSDPNDQLGKCKWHLKTLRGLPQSIFRFLEHIIPGITDPMLYIGMLFSMFAW 224
GS FS N Q + W+L + + +S+F L I G+TDPM+Y+GMLFS F W
Sbjct: 704 VTTHGSGFSRTTNTQPNE-HWNLNQMPKMEESLFSHLTETIAGVTDPMMYVGMLFSSFCW 762
Query: 225 HVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQVYSRDILSAAGEDGAFEVIAE 284
H ED+YL+SINY H G KTWYGVPG + QFEKV +N V L + + +I
Sbjct: 763 HNEDNYLYSINYLHKGTYKTWYGVPGSCSDQFEKVMKNLVPE---LFEKQPNLLYLLI-- 817
Query: 285 KTTIFPPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDWFPFG 344
T+ P + V +YK +Q PGE+VITFP+ YHAGFS+GF EAVNFA DW PFG
Sbjct: 818 --TMISPDVFKRRHVPIYKCLQGPGEYVITFPQAYHAGFSHGFTIAEAVNFAPPDWIPFG 875
Query: 345 EEAGKRYARLHKMVILPYQELLFKEVSEHEGTDIPSSVKATVLHQIRSLNNALFCLNNL- 403
+ +RY H+ + + +LL+ + +D+ S + +I+S N+L N L
Sbjct: 876 SSSIERYQETHRSSVFSHDQLLYTIANRSPSSDL-SVWLSKEFQKIKSKENSL--RNQLL 932
Query: 404 -KMPFDYLQNSQGS---------FVCDLCKRDCYLAFTEC 433
+ P ++ SQ S C +CK DC+L+F +C
Sbjct: 933 KRNPTLIIEKSQKSTQEILNNEPLQCFVCKYDCFLSFIQC 972
Score = 162 (62.1 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 57/192 (29%), Positives = 87/192 (45%)
Query: 4 PRTARNRSPVSK--QESYK--FKFSDVDWTHKISDCPAYYPTLQEFDDPFIYLQKIAPEA 59
P ++ + SP SK Q YK K + +W +I + P +YPT++EF P Y++ I P A
Sbjct: 238 PTSSTSTSPTSKLKQTQYKGWAKNTISEW--RIPEAPVFYPTIEEFKSPLRYIESIRPIA 295
Query: 60 SQFGICKIISPVKASVSAADVLKKEI--KGFEFGTYRQPLRLPKWNANDTGVFFSGERKH 117
++GICKI+ P K+ D + K I K F+F T Q + K N F +
Sbjct: 296 EKYGICKIVPPFKS-----DSITKNIDPKKFKFKTKVQNIHQLKRRWNGPNELFVSDLCE 350
Query: 118 TYDTFESEAIKMLKRQSPRLGDLPPSYVEKKFW---LEMTHGRKGTVEYGVNIEGSAFSS 174
D + ++ L + R D ++E W E TH K V ++ + F S
Sbjct: 351 FLDKKTNTPLESLPKYDGRDLDFYTLFLEVNRWGGCNECTHSSKWNEVIKV-LKVTDFCS 409
Query: 175 DPNDQLGKCKWH 186
P L K +H
Sbjct: 410 KPIQTL-KNYYH 420
>ZFIN|ZDB-GENE-030424-1 [details] [associations]
symbol:kdm5bb "lysine (K)-specific demethylase 5Bb"
species:7955 "Danio rerio" [GO:0016706 "oxidoreductase activity,
acting on paired donors, with incorporation or reduction of
molecular oxygen, 2-oxoglutarate as one donor, and incorporation of
one atom each of oxygen into both donors" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=ISS] [GO:0034720 "histone H3-K4
demethylation" evidence=ISS] [GO:0034647 "histone demethylase
activity (H3-trimethyl-K4 specific)" evidence=ISS] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 ZFIN:ZDB-GENE-030424-1 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 EMBL:CABZ01042196 EMBL:BX664742
Ensembl:ENSDART00000005583 Bgee:G1K2I1 Uniprot:G1K2I1
Length = 1522
Score = 468 (169.8 bits), Expect = 6.7e-51, Sum P(2) = 6.7e-51
Identities = 116/342 (33%), Positives = 169/342 (49%)
Query: 140 LPPSYVEKKFW-LEMTHGRKGTVEYGVNI-----------EGSAFSSDPNDQLG-KCKWH 186
+P VEK+FW L T TVEYG +I +G F P+D+ +C W+
Sbjct: 406 VPTELVEKEFWRLVGTIQEDVTVEYGADIASKEFGSGFPIKGGRFKIAPHDEKYLQCGWN 465
Query: 187 LKTLRGLPQSIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWY 246
L + + S+ + I G+T P LY+GM FS F WH+EDH+ +SINY H G PKTWY
Sbjct: 466 LNNMAMMTPSVLTHVTADICGMTLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWY 525
Query: 247 GVPGHHALQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQ 306
G PG A Q E V + L+ D +++ + TI P L+ +GV +Y+ Q
Sbjct: 526 GAPGFAAEQLEAVMKK-------LAPELFDSQPDLLHQLVTIMNPNTLMAHGVPIYRTNQ 578
Query: 307 KPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHKMVILPYQELL 366
GEFVITFPR YH+GF+ GFN EAVNF DW P G + Y +LH+ + + E++
Sbjct: 579 CAGEFVITFPRSYHSGFNQGFNFAEAVNFCTVDWMPLGRQCVDHYRQLHRYCVFSHDEMV 638
Query: 367 FKEVSEHEGTDI--PSSVKATV---LHQIRSLNNALFCLNNLKMP-FDYLQNSQGSFVCD 420
+ + D+ S+V+ + + + R L + + + F Y + C
Sbjct: 639 CNMAMKADCLDVVLASAVQKDMQLMIKEERELREKVRKMGVAQCELFQYDLLADDERQCV 698
Query: 421 LCKRDCYLAFTECKSCQR--YTCLFHEFKSRHCSCGYNRVVL 460
C+ CYL+ C C+ CL+H CSC + L
Sbjct: 699 KCRTTCYLSALTCP-CRPGVQVCLYHTHDL--CSCPISNYTL 737
Score = 105 (42.0 bits), Expect = 6.7e-51, Sum P(2) = 6.7e-51
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 34 DCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISP 70
+CP + P+ +EF DPF ++ KI P A + GICK+ P
Sbjct: 14 ECPVFEPSWEEFKDPFAFINKIRPIAEKTGICKVRPP 50
>UNIPROTKB|B4E1Y0 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
EMBL:AC010889 UniGene:Hs.80358 HGNC:HGNC:11115 ChiTaRS:KDM5D
HOVERGEN:HBG068574 EMBL:AK304027 IPI:IPI01013623 SMR:B4E1Y0
STRING:B4E1Y0 Ensembl:ENST00000535647 UCSC:uc004fuh.2
Uniprot:B4E1Y0
Length = 888
Score = 459 (166.6 bits), Expect = 2.9e-50, Sum P(2) = 2.9e-50
Identities = 115/343 (33%), Positives = 167/343 (48%)
Query: 140 LPPSYVEKKFW-LEMTHGRKGTVEYGVNIEGSAFSS-----------DPND-QLGKCKWH 186
+P VEK+FW L + TVEYG +I F S P + + W+
Sbjct: 406 VPTELVEKEFWRLVSSIEEDVTVEYGADIHSKEFGSGFPVSNSKQNLSPEEKEYATSGWN 465
Query: 187 LKTLRGLPQSIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWY 246
L + L QS+ + I G+ P LY+GM+FS F WH+EDH+ +SINY H G PKTWY
Sbjct: 466 LNVMPVLDQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWY 525
Query: 247 GVPGHHALQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQ 306
GVP A E+V + +L+ D +++ + T+ P L+ +GV V + Q
Sbjct: 526 GVPSLAAEHLEEVMK-------MLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQ 578
Query: 307 KPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHKMVILPYQELL 366
GEFVITFPR YH+GF+ G+N EAVNF DW P G + + Y RL + + ++EL+
Sbjct: 579 CAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELI 638
Query: 367 FKEVSEHEGTDIPSSVKA-----TVLHQIRSLNNALF---CLNNLKMPFDYLQNSQGSFV 418
K + E D+ +V ++ + R L AL + F+ L + +
Sbjct: 639 CKMAAFPETLDLNLAVAVHKEMFIMVQEERRLRKALLEKGVTEAEREAFELLPDDERQ-- 696
Query: 419 CDLCKRDCYLAFTECKSC-QRYTCLFHEFKSRHCSCGYNRVVL 460
C CK C+L+ C C CL H + C C +R L
Sbjct: 697 CIKCKTTCFLSALACYDCPDGLVCLSHI--NDLCKCSSSRQYL 737
Score = 98 (39.6 bits), Expect = 2.9e-50, Sum P(2) = 2.9e-50
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 34 DCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISP 70
+CP + P+ EF DP Y+ KI P A + GICKI P
Sbjct: 13 ECPVFEPSWAEFQDPLGYIAKIRPIAEKSGICKIRPP 49
>UNIPROTKB|Q5F3R2 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0034721 "histone H3-K4 demethylation,
trimethyl-H3-K4-specific" evidence=ISS] [GO:0034720 "histone H3-K4
demethylation" evidence=ISS] [GO:0034647 "histone demethylase
activity (H3-trimethyl-K4 specific)" evidence=ISS] [GO:0034648
"histone demethylase activity (H3-dimethyl-K4 specific)"
evidence=ISS] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 GO:GO:0016706 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
GO:GO:0034647 KO:K11446 HOGENOM:HOG000290719 EMBL:AJ851588
IPI:IPI00578699 RefSeq:NP_001026200.1 UniGene:Gga.7752 HSSP:Q14839
ProteinModelPortal:Q5F3R2 SMR:Q5F3R2 GeneID:421168 KEGG:gga:421168
CTD:10765 InParanoid:Q5F3R2 OrthoDB:EOG4HT8RC NextBio:20823981
Uniprot:Q5F3R2
Length = 1522
Score = 457 (165.9 bits), Expect = 4.8e-50, Sum P(2) = 4.8e-50
Identities = 123/369 (33%), Positives = 182/369 (49%)
Query: 110 FFSGERKHTYDTFE--SEAIKMLKRQSPRLGDLPPSYVEKKFW-LEMTHGRKGTVEYGVN 166
F R +T TF ++A K P + +P VEK+FW L T TVEYG +
Sbjct: 345 FEQAARDYTLRTFGEMADAFKSDYFNMP-VHMVPTELVEKEFWRLVSTIEEDVTVEYGAD 403
Query: 167 IEGSAFSSDPNDQLGKCK------------WHLKTLRGLPQSIFRFLEHIIPGITDPMLY 214
I F S + GK K W+L + + QS+ + I G+ P LY
Sbjct: 404 IASKEFGSGFPVRDGKFKVRPEEEEYLDSGWNLNNMPVMEQSVLAHITADICGMKLPWLY 463
Query: 215 IGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQVYSRDILSAAG 274
+GM FS F WH+EDH+ +SINY H G PKTWYG PG+ A Q E V + L+
Sbjct: 464 VGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGAPGYAAEQLEDVMKK-------LAPEL 516
Query: 275 EDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFSNGFNCGEAVN 334
+ +++ + TI P L+ +GV VY+ Q GEFVITFPR YH+GF+ GFN EAVN
Sbjct: 517 FESQPDLLHQLVTIMNPNTLMAHGVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVN 576
Query: 335 FAIRDWFPFGEEAGKRYARLHKMVILPYQELLFKEVSEHEGTDI--PSSVK---ATVLHQ 389
F DW P G + + Y L + + + E++ K S+ + D+ S+V+ A ++
Sbjct: 577 FCTVDWLPLGRQCIEHYRLLSRYCVFSHDEMICKMASKADILDVVVASTVQKDMAIMIDD 636
Query: 390 IRSLNNALFCL---NNLKMPFDYLQNSQGSFVCDLCKRDCYLAFTECKSCQR--YTCLFH 444
+ L + L ++ ++ F+ + + C CK C+++ C C+ CL+H
Sbjct: 637 EKMLREKVQKLGVTDSERVAFELFPDDERQ--CYKCKTTCFMSAVYCP-CKPGLLVCLYH 693
Query: 445 EFKSRHCSC 453
CSC
Sbjct: 694 V--EDLCSC 700
Score = 108 (43.1 bits), Expect = 4.8e-50, Sum P(2) = 4.8e-50
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 34 DCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISP 70
+CP + P+ +EF DPF ++ KI P A Q GICK+ P
Sbjct: 9 ECPVFEPSWEEFADPFAFIHKIRPIAEQTGICKVRPP 45
>MGI|MGI:99780 [details] [associations]
symbol:Kdm5d "lysine (K)-specific demethylase 5D"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=ISO] [GO:0034720
"histone H3-K4 demethylation" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
MGI:MGI:99780 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GeneTree:ENSGT00530000063118
GO:GO:0032453 KO:K11446 HOGENOM:HOG000290719 OrthoDB:EOG4894KP
CTD:8284 EMBL:AF127244 EMBL:AK140971 EMBL:BC059077 EMBL:Z29652
IPI:IPI00123375 IPI:IPI00848809 IPI:IPI00848997 IPI:IPI00850747
PIR:I48776 RefSeq:NP_035549.1 UniGene:Mm.262676
ProteinModelPortal:Q62240 SMR:Q62240 STRING:Q62240
PhosphoSite:Q62240 PRIDE:Q62240 Ensembl:ENSMUST00000055032
GeneID:20592 KEGG:mmu:20592 UCSC:uc009uyz.1 UCSC:uc009uzb.1
InParanoid:Q62240 NextBio:298905 Bgee:Q62240 Genevestigator:Q62240
GermOnline:ENSMUSG00000056673 Uniprot:Q62240
Length = 1548
Score = 469 (170.2 bits), Expect = 4.9e-50, Sum P(2) = 4.9e-50
Identities = 116/343 (33%), Positives = 165/343 (48%)
Query: 140 LPPSYVEKKFW-LEMTHGRKGTVEYGVNIEGSAFSS-----------DPND-QLGKCKWH 186
+P VEK+FW L + TVEYG +I F S P + + C W+
Sbjct: 415 VPTEVVEKEFWRLVSSIEEDVTVEYGADIHSKEFGSGFPVNNSKWDLSPEEKEYAACGWN 474
Query: 187 LKTLRGLPQSIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWY 246
L + L QS+ + I G+ P LY+GM+FS F WH+EDH+ +SINY H G PKTWY
Sbjct: 475 LNVMPVLDQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWY 534
Query: 247 GVPGHHALQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQ 306
GVP A E V + L+ D +++ + T+ P L+ +GV V + Q
Sbjct: 535 GVPSLAAEHLEDVMKR-------LTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQ 587
Query: 307 KPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHKMVILPYQELL 366
GEFVITFPR YH+GF+ G+N EAVNF DW P G + + Y RL + + ++EL+
Sbjct: 588 CAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPVGRQCIEHYRRLRRYCVFSHEELI 647
Query: 367 FKEVSEHEGTDIPSSVKA-----TVLHQIRSLNNALF---CLNNLKMPFDYLQNSQGSFV 418
K + E D+ +V ++ + R L L + F+ L + +
Sbjct: 648 CKMAAFPEKLDLNLAVAVHKEMFIMVQEERRLRKTLLEKGITEAEREAFELLPDDERQ-- 705
Query: 419 CDLCKRDCYLAFTECKSC-QRYTCLFHEFKSRHCSCGYNRVVL 460
C CK C+L+ C C CL H + C C NR L
Sbjct: 706 CIKCKTTCFLSALACYDCPDSLVCLSHI--NDLCKCSRNRQYL 746
Score = 96 (38.9 bits), Expect = 4.9e-50, Sum P(2) = 4.9e-50
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 34 DCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISP 70
+CP + P+ EF DP Y+ KI P A + GICKI P
Sbjct: 13 ECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPP 49
>UNIPROTKB|Q30DN6 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016568 GO:GO:0016706
GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 HSSP:O43918
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
KO:K11446 EMBL:DQ156494 RefSeq:NP_001106929.1 UniGene:Cfa.38975
ProteinModelPortal:Q30DN6 SMR:Q30DN6 GeneID:100134936
KEGG:cfa:100134936 CTD:8284 NextBio:20789320 Uniprot:Q30DN6
Length = 1545
Score = 464 (168.4 bits), Expect = 4.9e-50, Sum P(2) = 4.9e-50
Identities = 117/343 (34%), Positives = 168/343 (48%)
Query: 140 LPPSYVEKKFW-LEMTHGRKGTVEYGVNIE----GSAFS--------SDPNDQLGKCKWH 186
+P VEK+FW L + TVEYG +I GS F S ++ W+
Sbjct: 409 VPTELVEKEFWRLVSSIEEDVTVEYGADIHSKEFGSGFPVSSSQRILSPEEEEYATSGWN 468
Query: 187 LKTLRGLPQSIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWY 246
L + L QS+ + I G+ P LY+GM+FS F WH+EDH+ +SINY H G PKTWY
Sbjct: 469 LNVMPVLDQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWY 528
Query: 247 GVPGHHALQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQ 306
GVP A Q E+V + L+ D +++ + T+ P L+ +GV V + Q
Sbjct: 529 GVPSLAAEQLEEVMKR-------LTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQ 581
Query: 307 KPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHKMVILPYQELL 366
GEFVITFPR YH+GF+ G+N EAVNF DW P G + + Y RL + + ++EL+
Sbjct: 582 CAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELI 641
Query: 367 FKEVSEHEGTDIPSSVKA-----TVLHQIRSLNNALF---CLNNLKMPFDYLQNSQGSFV 418
K + E D+ +V ++ + R L AL + F+ L + +
Sbjct: 642 CKMAAFPEKLDLNLAVAVHKEMFIMVQEERRLRKALLEKGITEAEREAFELLPDDERQ-- 699
Query: 419 CDLCKRDCYLAFTECKSC-QRYTCLFHEFKSRHCSCGYNRVVL 460
C CK C+L+ C C CL H + C C +R L
Sbjct: 700 CIKCKTTCFLSALACYDCPDGLVCLSHI--NDLCKCSSSRQYL 740
Score = 101 (40.6 bits), Expect = 4.9e-50, Sum P(2) = 4.9e-50
Identities = 19/37 (51%), Positives = 23/37 (62%)
Query: 34 DCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISP 70
+CP + PT EF DP Y+ KI P A + GICKI P
Sbjct: 13 ECPVFEPTWAEFRDPLDYITKIRPIAEKSGICKIRPP 49
>UNIPROTKB|F1NN75 [details] [associations]
symbol:KDM5A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0019907 "cyclin-dependent
protein kinase activating kinase holoenzyme complex" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005737 GO:GO:0045893
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003682
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 OMA:ECSKPRE EMBL:AADN02006480
IPI:IPI00571489 Ensembl:ENSGALT00000021199 Uniprot:F1NN75
Length = 1696
Score = 482 (174.7 bits), Expect = 5.0e-50, Sum P(2) = 5.0e-50
Identities = 115/337 (34%), Positives = 169/337 (50%)
Query: 140 LPPSYVEKKFWLEMTHGRKGT-VEYGVNIEGSAFSSDPNDQLGKCK------------WH 186
+P VEK+FW ++ + VEYG +I F S + G+ K W+
Sbjct: 388 VPTELVEKEFWRLVSSIEEDVIVEYGADISSKDFGSGFPVKDGRRKLMPEEEDYALSGWN 447
Query: 187 LKTLRGLPQSIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWY 246
L + L QS+ + I G+ P LY+GM FS F WH+EDH+ +SINY H G PKTWY
Sbjct: 448 LNNMPILEQSVLAHINADISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWY 507
Query: 247 GVPGHHALQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQ 306
GVP H A Q E V + L+ + +++ + TI P +L+++GV VY+ Q
Sbjct: 508 GVPSHAAEQLEDVMKE-------LAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQ 560
Query: 307 KPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHKMVILPYQELL 366
GEFV+TFPR YH+GF+ G+N EAVNF DW P G + Y RL + + ++EL+
Sbjct: 561 CAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGRQCVSHYRRLGRHCVFSHEELI 620
Query: 367 FKEVSEHEGTDIPSSVKATVLHQIRSLNNALFCLNNLKMPFDYLQNSQGSFV-------- 418
FK ++ E D+ + A V ++ + L + L + + F
Sbjct: 621 FKMAADPECLDV--GLAAMVCKEMTLMIEEETRLRETVVQMGVLMSEEEVFELVPDDERQ 678
Query: 419 CDLCKRDCYLAFTECKSC--QRYTCLFHEFKSRHCSC 453
C C+ C+L+ C SC +R CL+H S C C
Sbjct: 679 CTACRTTCFLSALTC-SCNPERLVCLYHP--SDLCPC 712
Score = 84 (34.6 bits), Expect = 5.0e-50, Sum P(2) = 5.0e-50
Identities = 15/37 (40%), Positives = 23/37 (62%)
Query: 34 DCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISP 70
+CP + P+ +EF DP ++ +I A + GICKI P
Sbjct: 22 ECPVFEPSWEEFSDPLGFIGRIRGLAEKTGICKIRPP 58
>ZFIN|ZDB-GENE-030131-5379 [details] [associations]
symbol:kdm5ba "lysine (K)-specific demethylase
5Ba" species:7955 "Danio rerio" [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 ZFIN:ZDB-GENE-030131-5379 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 EMBL:CR628365 IPI:IPI00636517
Ensembl:ENSDART00000058729 ArrayExpress:F1R3Y4 Bgee:F1R3Y4
Uniprot:F1R3Y4
Length = 1483
Score = 457 (165.9 bits), Expect = 2.4e-49, Sum P(2) = 2.4e-49
Identities = 123/386 (31%), Positives = 186/386 (48%)
Query: 98 RLPKWNANDTG---VFFSGE---RKHTYDTFE--SEAIKMLKRQSPRLGDLPPSYVEKKF 149
R PK A + G V F E R +T TF +++ K P + +P VEK+F
Sbjct: 320 RCPKCLAQECGKPQVAFGFEQAPRDYTLRTFGDMADSFKSDYFNMP-VHMVPTELVEKEF 378
Query: 150 W-LEMTHGRKGTVEYGVNIEGSAFSSDPNDQLGKCK------------WHLKTLRGLPQS 196
W L T TVEYG +I F S + G K W+L + L S
Sbjct: 379 WRLVSTIEEDVTVEYGADIASKDFGSGFPVKNGTFKVSPEEEGYLTSGWNLNNMPVLEAS 438
Query: 197 IFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQF 256
+ + I G+ P LY+GM FS F WH+EDH+ +S+NY H G PKTWYG PG+ A Q
Sbjct: 439 VLTHVTADICGMKLPWLYVGMCFSSFCWHIEDHWSYSVNYLHWGEPKTWYGAPGYAAEQL 498
Query: 257 EKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFP 316
E V + L+ + +++ + TI P +L+++GV +Y+ Q GEFVITFP
Sbjct: 499 EDVMKG-------LAPELFESQPDLLHQLVTIMNPNLLMEHGVPIYRTNQCAGEFVITFP 551
Query: 317 RVYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHKMVILPYQELLFKEVSEHEGT 376
R YH+GF+ GFN EAVNF DW P G + + Y L++ + + E+ ++ +
Sbjct: 552 RAYHSGFNQGFNFAEAVNFCTADWLPLGRQCVEHYRSLYRYCVFSHDEMACNIAAKADSL 611
Query: 377 D------IPSSVKATVLHQ--IRSLNNALFCLNNLKMPFDYLQNSQGSFVCDLCKRDCYL 428
+ + + A + + +R L ++ ++ +D L + + C C+ CYL
Sbjct: 612 ELELACAVQKDMNAMIQEEKILREKAYKLGMWHSQQVDYDILPDEERQ--CAKCRTTCYL 669
Query: 429 AFTECK-SCQRYTCLFHEFKSRHCSC 453
+ C S ++ CL H CSC
Sbjct: 670 SAITCPCSPEQVVCLHHT--QDLCSC 693
Score = 101 (40.6 bits), Expect = 2.4e-49, Sum P(2) = 2.4e-49
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 34 DCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISP 70
+CP + P+ +EF DPF ++ KI P A GICKI P
Sbjct: 7 ECPVFEPSWEEFADPFGFINKIRPIAENTGICKIRPP 43
>UNIPROTKB|E9PFH2 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
EMBL:AC010889 HGNC:HGNC:11115 ChiTaRS:KDM5D IPI:IPI00644955
ProteinModelPortal:E9PFH2 SMR:E9PFH2 PRIDE:E9PFH2
Ensembl:ENST00000440077 ArrayExpress:E9PFH2 Bgee:E9PFH2
Uniprot:E9PFH2
Length = 1476
Score = 459 (166.6 bits), Expect = 3.0e-49, Sum P(2) = 3.0e-49
Identities = 115/343 (33%), Positives = 167/343 (48%)
Query: 140 LPPSYVEKKFW-LEMTHGRKGTVEYGVNIEGSAFSS-----------DPND-QLGKCKWH 186
+P VEK+FW L + TVEYG +I F S P + + W+
Sbjct: 365 VPTELVEKEFWRLVSSIEEDVTVEYGADIHSKEFGSGFPVSNSKQNLSPEEKEYATSGWN 424
Query: 187 LKTLRGLPQSIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWY 246
L + L QS+ + I G+ P LY+GM+FS F WH+EDH+ +SINY H G PKTWY
Sbjct: 425 LNVMPVLDQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWY 484
Query: 247 GVPGHHALQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQ 306
GVP A E+V + +L+ D +++ + T+ P L+ +GV V + Q
Sbjct: 485 GVPSLAAEHLEEVMK-------MLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQ 537
Query: 307 KPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHKMVILPYQELL 366
GEFVITFPR YH+GF+ G+N EAVNF DW P G + + Y RL + + ++EL+
Sbjct: 538 CAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELI 597
Query: 367 FKEVSEHEGTDIPSSVKA-----TVLHQIRSLNNALF---CLNNLKMPFDYLQNSQGSFV 418
K + E D+ +V ++ + R L AL + F+ L + +
Sbjct: 598 CKMAAFPETLDLNLAVAVHKEMFIMVQEERRLRKALLEKGVTEAEREAFELLPDDERQ-- 655
Query: 419 CDLCKRDCYLAFTECKSC-QRYTCLFHEFKSRHCSCGYNRVVL 460
C CK C+L+ C C CL H + C C +R L
Sbjct: 656 CIKCKTTCFLSALACYDCPDGLVCLSHI--NDLCKCSSSRQYL 696
Score = 98 (39.6 bits), Expect = 3.0e-49, Sum P(2) = 3.0e-49
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 34 DCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISP 70
+CP + P+ EF DP Y+ KI P A + GICKI P
Sbjct: 13 ECPVFEPSWAEFQDPLGYIAKIRPIAEKSGICKIRPP 49
>UNIPROTKB|Q9BY66 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=NAS] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0032453 "histone demethylase activity (H3-K4
specific)" evidence=IDA] [GO:0034720 "histone H3-K4 demethylation"
evidence=IDA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0007283 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 DrugBank:DB00126
Gene3D:1.10.150.60 SUPFAM:SSF46774 EMBL:CH471202 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
GO:GO:0032453 KO:K11446 HOGENOM:HOG000290719 OrthoDB:EOG4894KP
CTD:8284 EMBL:U52191 EMBL:D87072 EMBL:AF273841 EMBL:AC010889
EMBL:BC132721 EMBL:BC144102 EMBL:BC146767 EMBL:U52365 EMBL:AF134849
IPI:IPI00219940 IPI:IPI00329577 IPI:IPI00922879
RefSeq:NP_001140177.1 RefSeq:NP_001140178.1 RefSeq:NP_004644.2
UniGene:Hs.80358 PDB:2E6R PDB:2YQE PDBsum:2E6R PDBsum:2YQE
ProteinModelPortal:Q9BY66 SMR:Q9BY66 IntAct:Q9BY66 STRING:Q9BY66
PhosphoSite:Q9BY66 DMDM:17368706 PaxDb:Q9BY66 PRIDE:Q9BY66
Ensembl:ENST00000317961 Ensembl:ENST00000382806
Ensembl:ENST00000541639 GeneID:8284 KEGG:hsa:8284 UCSC:uc004fug.3
UCSC:uc010nwy.3 GeneCards:GC0YM021865 HGNC:HGNC:11115 MIM:426000
neXtProt:NX_Q9BY66 PharmGKB:PA35965 InParanoid:Q9BY66 OMA:TEMVERE
PhylomeDB:Q9BY66 ChiTaRS:KDM5D EvolutionaryTrace:Q9BY66
GenomeRNAi:8284 NextBio:31049 ArrayExpress:Q9BY66 Bgee:Q9BY66
CleanEx:HS_JARID1D Genevestigator:Q9BY66 GermOnline:ENSG00000012817
Uniprot:Q9BY66
Length = 1539
Score = 459 (166.6 bits), Expect = 3.4e-49, Sum P(2) = 3.4e-49
Identities = 115/343 (33%), Positives = 167/343 (48%)
Query: 140 LPPSYVEKKFW-LEMTHGRKGTVEYGVNIEGSAFSS-----------DPND-QLGKCKWH 186
+P VEK+FW L + TVEYG +I F S P + + W+
Sbjct: 406 VPTELVEKEFWRLVSSIEEDVTVEYGADIHSKEFGSGFPVSNSKQNLSPEEKEYATSGWN 465
Query: 187 LKTLRGLPQSIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWY 246
L + L QS+ + I G+ P LY+GM+FS F WH+EDH+ +SINY H G PKTWY
Sbjct: 466 LNVMPVLDQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWY 525
Query: 247 GVPGHHALQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQ 306
GVP A E+V + +L+ D +++ + T+ P L+ +GV V + Q
Sbjct: 526 GVPSLAAEHLEEVMK-------MLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQ 578
Query: 307 KPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHKMVILPYQELL 366
GEFVITFPR YH+GF+ G+N EAVNF DW P G + + Y RL + + ++EL+
Sbjct: 579 CAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELI 638
Query: 367 FKEVSEHEGTDIPSSVKA-----TVLHQIRSLNNALF---CLNNLKMPFDYLQNSQGSFV 418
K + E D+ +V ++ + R L AL + F+ L + +
Sbjct: 639 CKMAAFPETLDLNLAVAVHKEMFIMVQEERRLRKALLEKGVTEAEREAFELLPDDERQ-- 696
Query: 419 CDLCKRDCYLAFTECKSC-QRYTCLFHEFKSRHCSCGYNRVVL 460
C CK C+L+ C C CL H + C C +R L
Sbjct: 697 CIKCKTTCFLSALACYDCPDGLVCLSHI--NDLCKCSSSRQYL 737
Score = 98 (39.6 bits), Expect = 3.4e-49, Sum P(2) = 3.4e-49
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 34 DCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISP 70
+CP + P+ EF DP Y+ KI P A + GICKI P
Sbjct: 13 ECPVFEPSWAEFQDPLGYIAKIRPIAEKSGICKIRPP 49
>POMBASE|SPAC1002.05c [details] [associations]
symbol:jmj2 "histone demethylase Jmj2" species:4896
"Schizosaccharomyces pombe" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000790 "nuclear chromatin" evidence=ISM] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IMP] [GO:0008270 "zinc
ion binding" evidence=ISM] [GO:0016577 "histone demethylation"
evidence=IDA] [GO:0032453 "histone demethylase activity (H3-K4
specific)" evidence=IDA] [GO:0034647 "histone demethylase activity
(H3-trimethyl-K4 specific)" evidence=IMP;IDA] [GO:0034648 "histone
demethylase activity (H3-dimethyl-K4 specific)" evidence=IDA]
[GO:0051864 "histone demethylase activity (H3-K36 specific)"
evidence=ISO] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00501 SMART:SM00558 PomBase:SPAC1002.05c
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0008270
GO:GO:0006338 GO:GO:0000122 GO:GO:0000790 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 GO:GO:0051864
eggNOG:NOG327026 GO:GO:0034647 OMA:RNISGMT OrthoDB:EOG44N21B
RefSeq:NP_593492.1 ProteinModelPortal:Q9US53
EnsemblFungi:SPAC1002.05c.1 GeneID:2543275 KEGG:spo:SPAC1002.05c
NextBio:20804296 Uniprot:Q9US53
Length = 715
Score = 432 (157.1 bits), Expect = 8.9e-49, Sum P(2) = 8.9e-49
Identities = 117/368 (31%), Positives = 181/368 (49%)
Query: 117 HTYDTFESEAIKMLKRQSPRLGD--LPPSYVEKKFW-LEMTHGRKGTVEYGVNI----EG 169
+T FE K + D + VEK++W L + VEYG ++ +G
Sbjct: 350 YTLSNFEKYCDNFKKNYFSKFKDSEITEDIVEKEYWKLVKDNNTSLEVEYGADLSTLDQG 409
Query: 170 SAFSS---DPNDQLGKCKWHLKTLRGLPQSIFRFLEHIIPGITDPMLYIGMLFSMFAWHV 226
SAF S +P + K W+L + S+ ++++ + GIT P LY+GM FS F WHV
Sbjct: 410 SAFPSLAKNPVNPYSKDTWNLNVIASTNGSLLSYIDNPVSGITCPWLYVGMCFSTFCWHV 469
Query: 227 EDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQVYSRDILSAAGEDGAFEVIAEKT 286
ED+Y +S+NY H G K WYG+PG A +FE+ A + + D++ + ++ +
Sbjct: 470 EDNYTYSVNYQHYGDTKLWYGIPGDQAERFERAALD--IAPDLVKKQKD-----LLYQLA 522
Query: 287 TIFPPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDWF--PFG 344
T+ P L GV VY Q P EFVITFP+ +HAG ++GFN EAVNFA +DW F
Sbjct: 523 TMINPDELQKRGVDVYFIDQGPNEFVITFPKSFHAGINHGFNINEAVNFAPKDWLLNGFS 582
Query: 345 EEAGKRYARLHKMVILPYQELLFKEVSEHEGTDIPSSVKATVLHQI--RSLNNALFCLN- 401
+Y L K +L + L++ ++ + ++I S +H+ R L +
Sbjct: 583 LNGVLKYQSLLKPPVLSHDMLVYN-LATNPASEISVSELRPWVHEAVKRELGIRIMIRGR 641
Query: 402 -NLK-MPFDYLQNSQGSFVCDLCKRDCYLAFTECKSCQRYT-CLFH-EFKSRHCSCGY-N 456
+LK + + L ++ C CK Y + C SC+ T C H E+ C C N
Sbjct: 642 YDLKEILYRELMEDAENWQCQHCKAFSYFSQVAC-SCKSITVCPLHIEYL---CKCDLSN 697
Query: 457 RVVLLRKD 464
+ + L+ D
Sbjct: 698 KTLRLKVD 705
Score = 238 (88.8 bits), Expect = 8.5e-17, P = 8.5e-17
Identities = 62/201 (30%), Positives = 99/201 (49%)
Query: 65 CKIISPVKASVSAADVLKKEIKGFEFGTYRQPLRLPKWNANDTGVFFSG--ERKHTYDTF 122
C++ K + ++ GFE G Y K+ N +FS + + T D
Sbjct: 321 CEVEDTCKEAYCTKCIINPYEFGFETGNYYTLSNFEKYCDNFKKNYFSKFKDSEITEDIV 380
Query: 123 ESEAIKMLKRQSPRLGDLPPSYVEKKFWLEMTHGRKGTVEYGVNIEGSAFSS---DPNDQ 179
E E K++K + L E ++ +++ T++ +GSAF S +P +
Sbjct: 381 EKEYWKLVKDNNTSL--------EVEYGADLS-----TLD-----QGSAFPSLAKNPVNP 422
Query: 180 LGKCKWHLKTLRGLPQSIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHS 239
K W+L + S+ ++++ + GIT P LY+GM FS F WHVED+Y +S+NY H
Sbjct: 423 YSKDTWNLNVIASTNGSLLSYIDNPVSGITCPWLYVGMCFSTFCWHVEDNYTYSVNYQHY 482
Query: 240 GAPKTWYGVPGHHALQFEKVA 260
G K WYG+PG A +FE+ A
Sbjct: 483 GDTKLWYGIPGDQAERFERAA 503
Score = 105 (42.0 bits), Expect = 8.9e-49, Sum P(2) = 8.9e-49
Identities = 28/91 (30%), Positives = 44/91 (48%)
Query: 9 NRSPVSKQESYKFKFSDVDWTHKISDCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKII 68
N S +SK + + S H + P +YP +EF D Y+ KIAP ++GI KI+
Sbjct: 36 NLSSMSKNTGQRKQRSKS--IHGLPVAPVFYPDKEEFQDSIGYINKIAPIGEKYGIIKIV 93
Query: 69 SPVKASVSAADVLKKEIKGFEFGTYRQPLRL 99
P + ++ ++ F F T RQ L +
Sbjct: 94 PPAGWNPP----MQLDMNKFSFRTRRQDLHM 120
>UNIPROTKB|A1YVX4 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016706 "oxidoreductase activity,
acting on paired donors, with incorporation or reduction of
molecular oxygen, 2-oxoglutarate as one donor, and incorporation of
one atom each of oxygen into both donors" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0016706 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
KO:K11446 CTD:8242 EMBL:EF139241 RefSeq:NP_001090902.1
UniGene:Ssc.25162 ProteinModelPortal:A1YVX4 SMR:A1YVX4
GeneID:100037295 KEGG:ssc:100037295 Uniprot:A1YVX4
Length = 1516
Score = 456 (165.6 bits), Expect = 1.1e-48, Sum P(2) = 1.1e-48
Identities = 123/375 (32%), Positives = 181/375 (48%)
Query: 110 FFSGERKHTYDTFE--SEAIKMLKRQSPRLGDLPPSYVEKKFW-LEMTHGRKGTVEYGVN 166
F R++T +F +++ K P + +P VEK+FW L + TVEYG +
Sbjct: 344 FEQATREYTLQSFGEMADSFKADYSNMP-VHMVPTELVEKEFWRLVNSIEEDVTVEYGAD 402
Query: 167 IE----GSAFS-SD------PNDQ-LGKCKWHLKTLRGLPQSIFRFLEHIIPGITDPMLY 214
I GS F SD P ++ W+L + L QS+ + I G+ P LY
Sbjct: 403 IHSKEFGSGFPVSDSKRHLTPEEEEYATSGWNLNVMPVLEQSVLCHINADISGMKVPWLY 462
Query: 215 IGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQVYSRDILSAAG 274
+GM+FS F WH+EDH+ +SINY H G PKTWYGVP A E+V + L+
Sbjct: 463 VGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMKK-------LTPEL 515
Query: 275 EDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFSNGFNCGEAVN 334
D +++ + T+ P L+ +GV V + Q GEFVITFPR YH+GF+ G+N EAVN
Sbjct: 516 FDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVN 575
Query: 335 FAIRDWFPFGEEAGKRYARLHKMVILPYQELLFKEVSEHEGTDIPSSVKA-----TVLHQ 389
F DW P G + + Y RL + + ++EL+ K + E D+ + ++ +
Sbjct: 576 FCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAVHKEMFIMVQE 635
Query: 390 IRSLNNALF---CLNNLKMPFDYLQNSQGSFVCDLCKRDCYLAFTECKSC-QRYTCLFHE 445
R L AL + F+ L + + C CK C+L+ C C CL H
Sbjct: 636 ERRLRKALLEKGITEAEREAFELLPDDERQ--CIKCKTTCFLSALACYDCPDGLVCLSHI 693
Query: 446 FKSRHCSCGYNRVVL 460
+ C C +R L
Sbjct: 694 --NDLCKCSSSRQYL 706
Score = 96 (38.9 bits), Expect = 1.1e-48, Sum P(2) = 1.1e-48
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 34 DCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISP 70
+CP + P+ EF DP Y+ KI P A + GICKI P
Sbjct: 13 ECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPP 49
>UNIPROTKB|F1RUI7 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9823
"Sus scrofa" [GO:0032453 "histone demethylase activity (H3-K4
specific)" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 GO:GO:0032453 OMA:ISWQGRA
EMBL:FP102491 Ensembl:ENSSSCT00000013473 ArrayExpress:F1RUI7
Uniprot:F1RUI7
Length = 1516
Score = 454 (164.9 bits), Expect = 1.8e-48, Sum P(2) = 1.8e-48
Identities = 117/343 (34%), Positives = 168/343 (48%)
Query: 140 LPPSYVEKKFW-LEMTHGRKGTVEYGVNIE----GSAFS-SD------PNDQ-LGKCKWH 186
+P VEK+FW L + TVEYG +I GS F SD P ++ W+
Sbjct: 375 VPTELVEKEFWRLVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWN 434
Query: 187 LKTLRGLPQSIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWY 246
L + L QS+ + I G+ P LY+GM+FS F WH+EDH+ +SINY H G PKTWY
Sbjct: 435 LNVMPVLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWY 494
Query: 247 GVPGHHALQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQ 306
GVP A E+V + L+ D +++ + T+ P L+ +GV V + Q
Sbjct: 495 GVPSLAAEHLEEVMKK-------LTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQ 547
Query: 307 KPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHKMVILPYQELL 366
GEFVITFPR YH+GF+ G+N EAVNF DW P G + + Y RL + + ++EL+
Sbjct: 548 CAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELI 607
Query: 367 FKEVSEHEGTDIPSSVKA-----TVLHQIRSLNNALF---CLNNLKMPFDYLQNSQGSFV 418
K + E D+ + ++ + R L AL + F+ L + +
Sbjct: 608 CKMAACPEKLDLNLAAAVHKEMFIMVQEERRLRKALLEKGITEAEREAFELLPDDERQ-- 665
Query: 419 CDLCKRDCYLAFTECKSC-QRYTCLFHEFKSRHCSCGYNRVVL 460
C CK C+L+ C C CL H + C C +R L
Sbjct: 666 CIKCKTTCFLSALACYDCPDGLVCLSHI--NDLCKCSSSRQYL 706
Score = 96 (38.9 bits), Expect = 1.8e-48, Sum P(2) = 1.8e-48
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 34 DCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISP 70
+CP + P+ EF DP Y+ KI P A + GICKI P
Sbjct: 13 ECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPP 49
>UNIPROTKB|E2R0S2 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 OMA:ISWQGRA EMBL:AAEX03026384
Ensembl:ENSCAFT00000025665 Uniprot:E2R0S2
Length = 1520
Score = 454 (164.9 bits), Expect = 1.8e-48, Sum P(2) = 1.8e-48
Identities = 115/343 (33%), Positives = 166/343 (48%)
Query: 140 LPPSYVEKKFW-LEMTHGRKGTVEYGVNIE----GSAFSSDPN--------DQLGKCKWH 186
+P VEK+FW L + TVEYG +I GS F N ++ W+
Sbjct: 416 VPTELVEKEFWRLVNSIEEDVTVEYGADIHSKEFGSGFPVSDNKRHLTPEEEEYATSGWN 475
Query: 187 LKTLRGLPQSIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWY 246
L + L QS+ + I G+ P LY+GM+FS F WH+EDH+ +SINY H G PKTWY
Sbjct: 476 LNVMPVLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWY 535
Query: 247 GVPGHHALQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQ 306
GVP A E+V + L+ D +++ + T+ P L+ +GV V + Q
Sbjct: 536 GVPSLAAEHLEEVMKK-------LTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQ 588
Query: 307 KPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHKMVILPYQELL 366
GEFVITFPR YH+GF+ G+N EAVNF DW P G + + Y RL + + ++EL+
Sbjct: 589 CAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELI 648
Query: 367 FKEVSEHEGTDIPSSVKA-----TVLHQIRSLNNALF---CLNNLKMPFDYLQNSQGSFV 418
K + E D+ + ++ + R L AL + F+ L + +
Sbjct: 649 CKMAACPEKLDLNLAAAVHKEMFIMVQEERRLRKALLEKGITEAEREAFELLPDDERQ-- 706
Query: 419 CDLCKRDCYLAFTECKSC-QRYTCLFHEFKSRHCSCGYNRVVL 460
C CK C+L+ C C CL H + C C +R L
Sbjct: 707 CIKCKTTCFLSALACYDCPDGLVCLSHI--NDLCKCSSSRQYL 747
Score = 96 (38.9 bits), Expect = 1.8e-48, Sum P(2) = 1.8e-48
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 34 DCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISP 70
+CP + P+ EF DP Y+ KI P A + GICKI P
Sbjct: 13 ECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPP 49
>MGI|MGI:99781 [details] [associations]
symbol:Kdm5c "lysine (K)-specific demethylase 5C"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0001085 "RNA polymerase II transcription factor binding"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=ISO] [GO:0034720
"histone H3-K4 demethylation" evidence=ISO] [GO:0042802 "identical
protein binding" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
MGI:MGI:99781 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0016706
GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
eggNOG:NOG327026 GeneTree:ENSGT00530000063118 GO:GO:0032453
KO:K11446 CTD:8242 OrthoDB:EOG4894KP ChiTaRS:KDM5C EMBL:AF127245
EMBL:AK008105 EMBL:AK155279 EMBL:AK155427 EMBL:AK155651
EMBL:AK158340 EMBL:AK011577 EMBL:BC043096 EMBL:BC054550 EMBL:Z29651
EMBL:AK129096 EMBL:L29563 EMBL:AF039894 IPI:IPI00112611
IPI:IPI00221399 IPI:IPI00776021 PIR:I48775 PIR:I84689
RefSeq:NP_038696.2 UniGene:Mm.142655 ProteinModelPortal:P41230
SMR:P41230 STRING:P41230 PhosphoSite:P41230 PaxDb:P41230
PRIDE:P41230 Ensembl:ENSMUST00000082177 Ensembl:ENSMUST00000112584
Ensembl:ENSMUST00000112588 GeneID:20591 KEGG:mmu:20591
UCSC:uc009uqc.2 UCSC:uc009uqd.2 UCSC:uc009uqe.2 InParanoid:P41230
NextBio:298901 Bgee:P41230 Genevestigator:P41230
GermOnline:ENSMUSG00000025332 Uniprot:P41230
Length = 1554
Score = 454 (164.9 bits), Expect = 2.0e-48, Sum P(2) = 2.0e-48
Identities = 117/343 (34%), Positives = 168/343 (48%)
Query: 140 LPPSYVEKKFW-LEMTHGRKGTVEYGVNIE----GSAFS-SD------PNDQ-LGKCKWH 186
+P VEK+FW L + TVEYG +I GS F SD P ++ W+
Sbjct: 416 VPTELVEKEFWRLVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWN 475
Query: 187 LKTLRGLPQSIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWY 246
L + L QS+ + I G+ P LY+GM+FS F WH+EDH+ +SINY H G PKTWY
Sbjct: 476 LNVMPVLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWY 535
Query: 247 GVPGHHALQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQ 306
GVP A E+V + L+ D +++ + T+ P L+ +GV V + Q
Sbjct: 536 GVPSLAAEHLEEVMKK-------LTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQ 588
Query: 307 KPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHKMVILPYQELL 366
GEFVITFPR YH+GF+ G+N EAVNF DW P G + + Y RL + + ++EL+
Sbjct: 589 CAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELI 648
Query: 367 FKEVSEHEGTDIPSSVKA-----TVLHQIRSLNNALF---CLNNLKMPFDYLQNSQGSFV 418
K + E D+ + ++ + R L AL + F+ L + +
Sbjct: 649 CKMAACPEKLDLNLAAAVHKEMFIMVQEERRLRKALLEKGITEAEREAFELLPDDERQ-- 706
Query: 419 CDLCKRDCYLAFTECKSC-QRYTCLFHEFKSRHCSCGYNRVVL 460
C CK C+L+ C C CL H + C C +R L
Sbjct: 707 CIKCKTTCFLSALACYDCPDGLVCLSHI--NDLCKCSSSRQYL 747
Score = 96 (38.9 bits), Expect = 2.0e-48, Sum P(2) = 2.0e-48
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 34 DCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISP 70
+CP + P+ EF DP Y+ KI P A + GICKI P
Sbjct: 13 ECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPP 49
>UNIPROTKB|F1MYV2 [details] [associations]
symbol:KDM5C "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032453 "histone demethylase activity (H3-K4 specific)"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 GO:GO:0032453 KO:K11446 CTD:8242
OMA:ISWQGRA EMBL:DAAA02073278 IPI:IPI00703369 RefSeq:NP_776610.2
UniGene:Bt.8145 PRIDE:F1MYV2 Ensembl:ENSBTAT00000019893
GeneID:281490 KEGG:bta:281490 NextBio:20805465 ArrayExpress:F1MYV2
Uniprot:F1MYV2
Length = 1555
Score = 454 (164.9 bits), Expect = 2.0e-48, Sum P(2) = 2.0e-48
Identities = 117/343 (34%), Positives = 168/343 (48%)
Query: 140 LPPSYVEKKFW-LEMTHGRKGTVEYGVNIE----GSAFS-SD------PNDQ-LGKCKWH 186
+P VEK+FW L + TVEYG +I GS F SD P ++ W+
Sbjct: 416 VPTELVEKEFWRLVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWN 475
Query: 187 LKTLRGLPQSIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWY 246
L + L QS+ + I G+ P LY+GM+FS F WH+EDH+ +SINY H G PKTWY
Sbjct: 476 LNVMPVLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWY 535
Query: 247 GVPGHHALQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQ 306
GVP A E+V + L+ D +++ + T+ P L+ +GV V + Q
Sbjct: 536 GVPSLAAEHLEEVMKK-------LTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQ 588
Query: 307 KPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHKMVILPYQELL 366
GEFVITFPR YH+GF+ G+N EAVNF DW P G + + Y RL + + ++EL+
Sbjct: 589 CAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELI 648
Query: 367 FKEVSEHEGTDIPSSVKA-----TVLHQIRSLNNALF---CLNNLKMPFDYLQNSQGSFV 418
K + E D+ + ++ + R L AL + F+ L + +
Sbjct: 649 CKMAACPEKLDLNLAAAVHKEMFIMVQEERRLRKALLEKGITEAEREAFELLPDDERQ-- 706
Query: 419 CDLCKRDCYLAFTECKSC-QRYTCLFHEFKSRHCSCGYNRVVL 460
C CK C+L+ C C CL H + C C +R L
Sbjct: 707 CIKCKTTCFLSALACYDCPDGLVCLSHI--NDLCKCSSSRQYL 747
Score = 96 (38.9 bits), Expect = 2.0e-48, Sum P(2) = 2.0e-48
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 34 DCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISP 70
+CP + P+ EF DP Y+ KI P A + GICKI P
Sbjct: 13 ECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPP 49
>UNIPROTKB|Q38JA7 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016706 "oxidoreductase activity,
acting on paired donors, with incorporation or reduction of
molecular oxygen, 2-oxoglutarate as one donor, and incorporation of
one atom each of oxygen into both donors" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 GO:GO:0016568 GO:GO:0016706
GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 HSSP:O43918
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
eggNOG:NOG327026 KO:K11446 EMBL:DQ223016 RefSeq:NP_001041497.1
UniGene:Cfa.46487 ProteinModelPortal:Q38JA7 SMR:Q38JA7 PRIDE:Q38JA7
GeneID:491894 KEGG:cfa:491894 CTD:8242 InParanoid:Q38JA7
OrthoDB:EOG4894KP NextBio:20864597 Uniprot:Q38JA7
Length = 1556
Score = 454 (164.9 bits), Expect = 2.0e-48, Sum P(2) = 2.0e-48
Identities = 115/343 (33%), Positives = 166/343 (48%)
Query: 140 LPPSYVEKKFW-LEMTHGRKGTVEYGVNIE----GSAFSSDPN--------DQLGKCKWH 186
+P VEK+FW L + TVEYG +I GS F N ++ W+
Sbjct: 416 VPTELVEKEFWRLVNSIEEDVTVEYGADIHSKEFGSGFPVSDNKRHLTPEEEEYATSGWN 475
Query: 187 LKTLRGLPQSIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWY 246
L + L QS+ + I G+ P LY+GM+FS F WH+EDH+ +SINY H G PKTWY
Sbjct: 476 LNVMPVLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWY 535
Query: 247 GVPGHHALQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQ 306
GVP A E+V + L+ D +++ + T+ P L+ +GV V + Q
Sbjct: 536 GVPSLAAEHLEEVMKK-------LTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQ 588
Query: 307 KPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHKMVILPYQELL 366
GEFVITFPR YH+GF+ G+N EAVNF DW P G + + Y RL + + ++EL+
Sbjct: 589 CAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELI 648
Query: 367 FKEVSEHEGTDIPSSVKA-----TVLHQIRSLNNALF---CLNNLKMPFDYLQNSQGSFV 418
K + E D+ + ++ + R L AL + F+ L + +
Sbjct: 649 CKMAACPEKLDLNLAAAVHKEMFIMVQEERRLRKALLEKGITEAEREAFELLPDDERQ-- 706
Query: 419 CDLCKRDCYLAFTECKSC-QRYTCLFHEFKSRHCSCGYNRVVL 460
C CK C+L+ C C CL H + C C +R L
Sbjct: 707 CIKCKTTCFLSALACYDCPDGLVCLSHI--NDLCKCSSSRQYL 747
Score = 96 (38.9 bits), Expect = 2.0e-48, Sum P(2) = 2.0e-48
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 34 DCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISP 70
+CP + P+ EF DP Y+ KI P A + GICKI P
Sbjct: 13 ECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPP 49
>UNIPROTKB|B0QZ44 [details] [associations]
symbol:KDM5C "Smcy homolog, X-linked (Mouse), isoform
CRA_a" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:CH471154 EMBL:AL139396 HOGENOM:HOG000290719
UniGene:Hs.631768 HGNC:HGNC:11114 ChiTaRS:KDM5C IPI:IPI00879547
SMR:B0QZ44 Ensembl:ENST00000404049 UCSC:uc004dsa.3
HOVERGEN:HBG068574 Uniprot:B0QZ44
Length = 1559
Score = 454 (164.9 bits), Expect = 2.0e-48, Sum P(2) = 2.0e-48
Identities = 117/343 (34%), Positives = 168/343 (48%)
Query: 140 LPPSYVEKKFW-LEMTHGRKGTVEYGVNIE----GSAFS-SD------PNDQ-LGKCKWH 186
+P VEK+FW L + TVEYG +I GS F SD P ++ W+
Sbjct: 415 VPTELVEKEFWRLVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWN 474
Query: 187 LKTLRGLPQSIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWY 246
L + L QS+ + I G+ P LY+GM+FS F WH+EDH+ +SINY H G PKTWY
Sbjct: 475 LNVMPVLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWY 534
Query: 247 GVPGHHALQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQ 306
GVP A E+V + L+ D +++ + T+ P L+ +GV V + Q
Sbjct: 535 GVPSLAAEHLEEVMKK-------LTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQ 587
Query: 307 KPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHKMVILPYQELL 366
GEFVITFPR YH+GF+ G+N EAVNF DW P G + + Y RL + + ++EL+
Sbjct: 588 CAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELI 647
Query: 367 FKEVSEHEGTDIPSSVKA-----TVLHQIRSLNNALF---CLNNLKMPFDYLQNSQGSFV 418
K + E D+ + ++ + R L AL + F+ L + +
Sbjct: 648 CKMAACPEKLDLNLAAAVHKEMFIMVQEERRLRKALLEKGITEAEREAFELLPDDERQ-- 705
Query: 419 CDLCKRDCYLAFTECKSC-QRYTCLFHEFKSRHCSCGYNRVVL 460
C CK C+L+ C C CL H + C C +R L
Sbjct: 706 CIKCKTTCFLSALACYDCPDGLVCLSHI--NDLCKCSSSRQYL 746
Score = 96 (38.9 bits), Expect = 2.0e-48, Sum P(2) = 2.0e-48
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 34 DCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISP 70
+CP + P+ EF DP Y+ KI P A + GICKI P
Sbjct: 13 ECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPP 49
>UNIPROTKB|P41229 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0032453 "histone demethylase activity (H3-K4
specific)" evidence=IDA] [GO:0034720 "histone H3-K4 demethylation"
evidence=IDA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 GO:GO:0016706 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 EMBL:AL139396
eggNOG:NOG327026 GO:GO:0032453 KO:K11446 HOGENOM:HOG000290719
CTD:8242 OrthoDB:EOG4894KP EMBL:L25270 EMBL:AK304732 EMBL:BC054499
EMBL:Z29650 IPI:IPI00013185 IPI:IPI00219412 IPI:IPI00640875
IPI:IPI01012687 PIR:I54361 RefSeq:NP_001140174.1 RefSeq:NP_004178.2
UniGene:Hs.631768 PDB:2JRZ PDBsum:2JRZ ProteinModelPortal:P41229
SMR:P41229 DIP:DIP-39663N IntAct:P41229 STRING:P41229
PhosphoSite:P41229 DMDM:117949812 PaxDb:P41229 PRIDE:P41229
DNASU:8242 Ensembl:ENST00000375379 Ensembl:ENST00000375383
Ensembl:ENST00000375401 Ensembl:ENST00000452825 GeneID:8242
KEGG:hsa:8242 UCSC:uc004drz.3 GeneCards:GC0XM053237 HGNC:HGNC:11114
MIM:300534 MIM:314690 neXtProt:NX_P41229 Orphanet:85279
PharmGKB:PA35964 InParanoid:P41229 OMA:ISWQGRA PhylomeDB:P41229
ChiTaRS:KDM5C EvolutionaryTrace:P41229 GenomeRNAi:8242
NextBio:31002 ArrayExpress:P41229 Bgee:P41229 CleanEx:HS_JARID1C
Genevestigator:P41229 GermOnline:ENSG00000126012 Uniprot:P41229
Length = 1560
Score = 454 (164.9 bits), Expect = 2.0e-48, Sum P(2) = 2.0e-48
Identities = 117/343 (34%), Positives = 168/343 (48%)
Query: 140 LPPSYVEKKFW-LEMTHGRKGTVEYGVNIE----GSAFS-SD------PNDQ-LGKCKWH 186
+P VEK+FW L + TVEYG +I GS F SD P ++ W+
Sbjct: 416 VPTELVEKEFWRLVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWN 475
Query: 187 LKTLRGLPQSIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWY 246
L + L QS+ + I G+ P LY+GM+FS F WH+EDH+ +SINY H G PKTWY
Sbjct: 476 LNVMPVLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWY 535
Query: 247 GVPGHHALQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQ 306
GVP A E+V + L+ D +++ + T+ P L+ +GV V + Q
Sbjct: 536 GVPSLAAEHLEEVMKK-------LTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQ 588
Query: 307 KPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHKMVILPYQELL 366
GEFVITFPR YH+GF+ G+N EAVNF DW P G + + Y RL + + ++EL+
Sbjct: 589 CAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELI 648
Query: 367 FKEVSEHEGTDIPSSVKA-----TVLHQIRSLNNALF---CLNNLKMPFDYLQNSQGSFV 418
K + E D+ + ++ + R L AL + F+ L + +
Sbjct: 649 CKMAACPEKLDLNLAAAVHKEMFIMVQEERRLRKALLEKGITEAEREAFELLPDDERQ-- 706
Query: 419 CDLCKRDCYLAFTECKSC-QRYTCLFHEFKSRHCSCGYNRVVL 460
C CK C+L+ C C CL H + C C +R L
Sbjct: 707 CIKCKTTCFLSALACYDCPDGLVCLSHI--NDLCKCSSSRQYL 747
Score = 96 (38.9 bits), Expect = 2.0e-48, Sum P(2) = 2.0e-48
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 34 DCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISP 70
+CP + P+ EF DP Y+ KI P A + GICKI P
Sbjct: 13 ECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPP 49
>UNIPROTKB|K7GNM7 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 EMBL:FP102491
Ensembl:ENSSSCT00000032687 Uniprot:K7GNM7
Length = 1560
Score = 454 (164.9 bits), Expect = 2.0e-48, Sum P(2) = 2.0e-48
Identities = 117/343 (34%), Positives = 168/343 (48%)
Query: 140 LPPSYVEKKFW-LEMTHGRKGTVEYGVNIE----GSAFS-SD------PNDQ-LGKCKWH 186
+P VEK+FW L + TVEYG +I GS F SD P ++ W+
Sbjct: 416 VPTELVEKEFWRLVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWN 475
Query: 187 LKTLRGLPQSIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWY 246
L + L QS+ + I G+ P LY+GM+FS F WH+EDH+ +SINY H G PKTWY
Sbjct: 476 LNVMPVLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWY 535
Query: 247 GVPGHHALQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQ 306
GVP A E+V + L+ D +++ + T+ P L+ +GV V + Q
Sbjct: 536 GVPSLAAEHLEEVMKK-------LTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQ 588
Query: 307 KPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHKMVILPYQELL 366
GEFVITFPR YH+GF+ G+N EAVNF DW P G + + Y RL + + ++EL+
Sbjct: 589 CAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELI 648
Query: 367 FKEVSEHEGTDIPSSVKA-----TVLHQIRSLNNALF---CLNNLKMPFDYLQNSQGSFV 418
K + E D+ + ++ + R L AL + F+ L + +
Sbjct: 649 CKMAACPEKLDLNLAAAVHKEMFIMVQEERRLRKALLEKGITEAEREAFELLPDDERQ-- 706
Query: 419 CDLCKRDCYLAFTECKSC-QRYTCLFHEFKSRHCSCGYNRVVL 460
C CK C+L+ C C CL H + C C +R L
Sbjct: 707 CIKCKTTCFLSALACYDCPDGLVCLSHI--NDLCKCSSSRQYL 747
Score = 96 (38.9 bits), Expect = 2.0e-48, Sum P(2) = 2.0e-48
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 34 DCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISP 70
+CP + P+ EF DP Y+ KI P A + GICKI P
Sbjct: 13 ECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPP 49
>FB|FBgn0031759 [details] [associations]
symbol:lid "little imaginal discs" species:7227 "Drosophila
melanogaster" [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=IMP] [GO:0043992
"histone acetyltransferase activity (H3-K9 specific)" evidence=IMP]
[GO:0034647 "histone demethylase activity (H3-trimethyl-K4
specific)" evidence=IMP] [GO:0034720 "histone H3-K4 demethylation"
evidence=IMP] [GO:0043970 "histone H3-K9 acetylation" evidence=IMP]
[GO:0070822 "Sin3-type complex" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006325 "chromatin organization" evidence=IMP]
[GO:0045475 "locomotor rhythm" evidence=IMP] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0007275 GO:GO:0045893 EMBL:AE014134
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0016706 GO:GO:0016702 GO:GO:0045475 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 GO:GO:0070822 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
GeneTree:ENSGT00530000063118 GO:GO:0034647 KO:K11446 OMA:TEMVERE
EMBL:AY095051 RefSeq:NP_001245908.1 RefSeq:NP_001245909.1
RefSeq:NP_001245910.1 RefSeq:NP_523486.1 RefSeq:NP_723140.1
UniGene:Dm.2779 PDB:2LM1 PDBsum:2LM1 ProteinModelPortal:Q9VMJ7
SMR:Q9VMJ7 DIP:DIP-29330N IntAct:Q9VMJ7 MINT:MINT-1672742
STRING:Q9VMJ7 PaxDb:Q9VMJ7 PRIDE:Q9VMJ7 EnsemblMetazoa:FBtr0079231
EnsemblMetazoa:FBtr0079232 EnsemblMetazoa:FBtr0307069
EnsemblMetazoa:FBtr0307070 EnsemblMetazoa:FBtr0307071 GeneID:33837
KEGG:dme:Dmel_CG9088 CTD:33837 FlyBase:FBgn0031759
InParanoid:Q9VMJ7 OrthoDB:EOG408KPT PhylomeDB:Q9VMJ7
GenomeRNAi:33837 NextBio:785524 Bgee:Q9VMJ7 GO:GO:0043992
Uniprot:Q9VMJ7
Length = 1838
Score = 446 (162.1 bits), Expect = 3.0e-47, Sum P(2) = 3.0e-47
Identities = 119/374 (31%), Positives = 179/374 (47%)
Query: 110 FFSGERKHTYDTFESEAIKMLKRQSPRLGDLPPS-YVEKKFW-LEMTHGRKGTVEYGVNI 167
F ER++T F A + + + L P+ VE++FW + + TVEYG ++
Sbjct: 509 FEQAEREYTLQQFGQMADQFKQEYFRKPVHLVPTEMVEREFWRIVSSIDEDVTVEYGADL 568
Query: 168 E----GSAFSSD------PNDQ-LGKCKWHLKTLRGLPQSIFRFLEHIIPGITDPMLYIG 216
GS F + P DQ + W+L L L SI + I G+ P +Y+G
Sbjct: 569 HTMDHGSGFPTKSSLYLLPGDQEYAESSWNLNNLPLLEDSILGHINADISGMNAPWMYVG 628
Query: 217 MLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQVYSRDILSAAGED 276
M F+ F WH EDH+ +SINY H G PKTWYGVPG A QFE+ + + ++ S+ +
Sbjct: 629 MCFAAFCWHNEDHWSYSINYLHWGEPKTWYGVPGSCAEQFEETMKQA--APELFSSQPD- 685
Query: 277 GAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFSNGFNCGEAVNFA 336
++ + TI P IL++N V V++ Q GEFVITFPR YHAGF+ G+N EAVNFA
Sbjct: 686 ----LLHQLVTIMNPNILMNNRVPVFRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFA 741
Query: 337 IRDWFPFGEEAGKRYARLHKMVILPYQELLFKEVSEHE----GTDIPSSVK-ATVLHQIR 391
DW G E Y+ L + + + EL+ K E G + A ++ +
Sbjct: 742 PADWLKMGRECVNHYSMLRRFCVFSHDELVCKMALEPAKLTFGIATACYIDMAEMVDTEK 801
Query: 392 SLNNALF---CLNNLKMPFDYLQNSQGSFVCDLCKRDCYLAFTECKSCQRY-TCLFHEFK 447
L +L + F+ + + + C C C+L+ C+ + CL H
Sbjct: 802 KLRKSLLEWGVTRAERRAFELVNDDERH--CQECNTTCFLSAVACECNDKLIVCLRHY-- 857
Query: 448 SRHCSCGYNRVVLL 461
+ C C + L+
Sbjct: 858 TVLCGCAPEKHTLI 871
Score = 95 (38.5 bits), Expect = 3.0e-47, Sum P(2) = 3.0e-47
Identities = 21/50 (42%), Positives = 28/50 (56%)
Query: 34 DCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISPVKASVS-AADVLK 82
+CP + PT +EF +P Y+ KI A + GI KI+ P S A DV K
Sbjct: 160 ECPVFRPTTEEFKNPLAYISKIRSIAEKCGIAKILPPATWSPPFAVDVDK 209
>UNIPROTKB|F1NUR9 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0034647 "histone
demethylase activity (H3-trimethyl-K4 specific)" evidence=IEA]
[GO:0034648 "histone demethylase activity (H3-dimethyl-K4
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 GeneTree:ENSGT00530000063118
GO:GO:0034647 OMA:CENEKEM EMBL:AADN02063991 EMBL:AADN02063988
EMBL:AADN02063989 EMBL:AADN02063990 IPI:IPI00823098
Ensembl:ENSGALT00000040834 ArrayExpress:F1NUR9 Uniprot:F1NUR9
Length = 1521
Score = 457 (165.9 bits), Expect = 3.3e-47, Sum P(2) = 3.3e-47
Identities = 123/369 (33%), Positives = 182/369 (49%)
Query: 110 FFSGERKHTYDTFE--SEAIKMLKRQSPRLGDLPPSYVEKKFW-LEMTHGRKGTVEYGVN 166
F R +T TF ++A K P + +P VEK+FW L T TVEYG +
Sbjct: 344 FEQAARDYTLRTFGEMADAFKSDYFNMP-VHMVPTELVEKEFWRLVSTIEEDVTVEYGAD 402
Query: 167 IEGSAFSSDPNDQLGKCK------------WHLKTLRGLPQSIFRFLEHIIPGITDPMLY 214
I F S + GK K W+L + + QS+ + I G+ P LY
Sbjct: 403 IASKEFGSGFPVRDGKFKVRPEEEEYLDSGWNLNNMPVMEQSVLAHITADICGMKLPWLY 462
Query: 215 IGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQVYSRDILSAAG 274
+GM FS F WH+EDH+ +SINY H G PKTWYG PG+ A Q E V + L+
Sbjct: 463 VGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGAPGYAAEQLEDVMKK-------LAPEL 515
Query: 275 EDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFSNGFNCGEAVN 334
+ +++ + TI P L+ +GV VY+ Q GEFVITFPR YH+GF+ GFN EAVN
Sbjct: 516 FESQPDLLHQLVTIMNPNTLMAHGVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVN 575
Query: 335 FAIRDWFPFGEEAGKRYARLHKMVILPYQELLFKEVSEHEGTDI--PSSVK---ATVLHQ 389
F DW P G + + Y L + + + E++ K S+ + D+ S+V+ A ++
Sbjct: 576 FCTVDWLPLGRQCIEHYRLLSRYCVFSHDEMICKMASKADILDVVVASTVQKDMAIMIDD 635
Query: 390 IRSLNNALFCL---NNLKMPFDYLQNSQGSFVCDLCKRDCYLAFTECKSCQR--YTCLFH 444
+ L + L ++ ++ F+ + + C CK C+++ C C+ CL+H
Sbjct: 636 EKMLREKVQKLGVTDSERVAFELFPDDERQ--CYKCKTTCFMSAVYCP-CKPGLLVCLYH 692
Query: 445 EFKSRHCSC 453
CSC
Sbjct: 693 V--EDLCSC 699
Score = 81 (33.6 bits), Expect = 3.3e-47, Sum P(2) = 3.3e-47
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 35 CPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISP 70
C + P+ +EF DPF ++ + P A Q GICK+ P
Sbjct: 10 CGVFEPSWEEFADPFAFIM-LRPIAEQTGICKVRPP 44
>UNIPROTKB|I3L8V3 [details] [associations]
symbol:KDM5A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0019907 "cyclin-dependent protein
kinase activating kinase holoenzyme complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 Pfam:PF02373 Pfam:PF02928
Pfam:PF08429 PROSITE:PS51184 SMART:SM00558 GO:GO:0005634
GO:GO:0016706 GeneTree:ENSGT00530000063118 EMBL:FP102715
Ensembl:ENSSSCT00000023353 Uniprot:I3L8V3
Length = 583
Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
Identities = 115/337 (34%), Positives = 170/337 (50%)
Query: 140 LPPSYVEKKFWLEMTHGRKGT-VEYGVNIEGSAFSSDPNDQLGKCK------------WH 186
+P VEK+FW ++ + VEYG +I F S + G+ K W+
Sbjct: 2 VPTELVEKEFWRLVSSIEEDVIVEYGADISSKDFGSGFPVKDGRRKMLPEEEEYALSGWN 61
Query: 187 LKTLRGLPQSIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWY 246
L + L QS+ + I G+ P LY+GM FS F WH+EDH+ +SINY H G PKTWY
Sbjct: 62 LNNMPVLEQSVLAHINVDISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWY 121
Query: 247 GVPGHHALQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQ 306
GVP H A Q E+V R L+ + +++ + TI P +L+++GV VY+ Q
Sbjct: 122 GVPSHAAEQLEEVMRE-------LAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQ 174
Query: 307 KPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHKMVILPYQELL 366
GEFV+TFPR YH+GF+ G+N EAVNF DW P G + Y RL + + ++EL+
Sbjct: 175 CAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELI 234
Query: 367 FKEVSEHEGTDIPSSVKATVLHQIRSLNNALFCLNNLKMPFDYLQNSQGSFV-------- 418
FK ++ E D+ + A V ++ + L + L + + F
Sbjct: 235 FKMAADPECLDV--GLAAMVCKELTLMTEEETRLRESVVQMGVLMSEEEVFELVPDDERQ 292
Query: 419 CDLCKRDCYLAFTECKSC--QRYTCLFHEFKSRHCSC 453
C C+ C+L+ C SC +R CL+H + C C
Sbjct: 293 CSACRTTCFLSALTC-SCNPERLVCLYHP--TDLCPC 326
>UNIPROTKB|F1NRC4 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0034647 "histone
demethylase activity (H3-trimethyl-K4 specific)" evidence=IEA]
[GO:0034648 "histone demethylase activity (H3-dimethyl-K4
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 GeneTree:ENSGT00530000063118
GO:GO:0034647 IPI:IPI00578699 EMBL:AADN02063991 EMBL:AADN02063988
EMBL:AADN02063989 EMBL:AADN02063990 Ensembl:ENSGALT00000000582
ArrayExpress:F1NRC4 Uniprot:F1NRC4
Length = 1510
Score = 457 (165.9 bits), Expect = 1.8e-46, Sum P(2) = 1.8e-46
Identities = 123/369 (33%), Positives = 182/369 (49%)
Query: 110 FFSGERKHTYDTFE--SEAIKMLKRQSPRLGDLPPSYVEKKFW-LEMTHGRKGTVEYGVN 166
F R +T TF ++A K P + +P VEK+FW L T TVEYG +
Sbjct: 333 FEQAARDYTLRTFGEMADAFKSDYFNMP-VHMVPTELVEKEFWRLVSTIEEDVTVEYGAD 391
Query: 167 IEGSAFSSDPNDQLGKCK------------WHLKTLRGLPQSIFRFLEHIIPGITDPMLY 214
I F S + GK K W+L + + QS+ + I G+ P LY
Sbjct: 392 IASKEFGSGFPVRDGKFKVRPEEEEYLDSGWNLNNMPVMEQSVLAHITADICGMKLPWLY 451
Query: 215 IGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQVYSRDILSAAG 274
+GM FS F WH+EDH+ +SINY H G PKTWYG PG+ A Q E V + L+
Sbjct: 452 VGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGAPGYAAEQLEDVMKK-------LAPEL 504
Query: 275 EDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFSNGFNCGEAVN 334
+ +++ + TI P L+ +GV VY+ Q GEFVITFPR YH+GF+ GFN EAVN
Sbjct: 505 FESQPDLLHQLVTIMNPNTLMAHGVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVN 564
Query: 335 FAIRDWFPFGEEAGKRYARLHKMVILPYQELLFKEVSEHEGTDI--PSSVK---ATVLHQ 389
F DW P G + + Y L + + + E++ K S+ + D+ S+V+ A ++
Sbjct: 565 FCTVDWLPLGRQCIEHYRLLSRYCVFSHDEMICKMASKADILDVVVASTVQKDMAIMIDD 624
Query: 390 IRSLNNALFCL---NNLKMPFDYLQNSQGSFVCDLCKRDCYLAFTECKSCQR--YTCLFH 444
+ L + L ++ ++ F+ + + C CK C+++ C C+ CL+H
Sbjct: 625 EKMLREKVQKLGVTDSERVAFELFPDDERQ--CYKCKTTCFMSAVYCP-CKPGLLVCLYH 681
Query: 445 EFKSRHCSC 453
CSC
Sbjct: 682 V--EDLCSC 688
Score = 74 (31.1 bits), Expect = 1.8e-46, Sum P(2) = 1.8e-46
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 38 YYPTLQEFDDPFIYLQKIAPEASQFGICKIISP 70
+ P+ +EF DPF ++ + P A Q GICK+ P
Sbjct: 2 FEPSWEEFADPFAFIM-LRPIAEQTGICKVRPP 33
>TAIR|locus:2025635 [details] [associations]
symbol:PKDM7D species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0006486 "protein glycosylation" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0010413 "glucuronoxylan metabolic process" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045492
"xylan biosynthetic process" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0050665 "hydrogen peroxide biosynthetic process" evidence=RCA]
InterPro:IPR003347 InterPro:IPR003888 InterPro:IPR003889
InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928 Pfam:PF05964
Pfam:PF05965 PROSITE:PS51184 PROSITE:PS51542 PROSITE:PS51543
SMART:SM00541 SMART:SM00542 SMART:SM00558 EMBL:CP002684
GO:GO:0005634 GO:GO:0003700 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026 KO:K11446 EMBL:AB493442
IPI:IPI00545403 RefSeq:NP_001184940.1 RefSeq:NP_172338.4
UniGene:At.26858 ProteinModelPortal:C0SUT9 PaxDb:C0SUT9
PRIDE:C0SUT9 EnsemblPlants:AT1G08620.1 EnsemblPlants:AT1G08620.2
GeneID:837384 KEGG:ath:AT1G08620 TAIR:At1g08620 OMA:GMNELET
PhylomeDB:C0SUT9 ProtClustDB:CLSN2722602 Genevestigator:C0SUT9
Uniprot:C0SUT9
Length = 1209
Score = 408 (148.7 bits), Expect = 4.1e-46, Sum P(2) = 4.1e-46
Identities = 96/284 (33%), Positives = 151/284 (53%)
Query: 89 EFGTYRQPLRLPKWNANDTGVFFSGERKHTYDTFESEAIKMLKRQSPRLGDLPPSYVEKK 148
+F Y + + ++T + ++ D +E A++ ++ + R+ D +E
Sbjct: 274 DFQKYADEFKAQYFKKSETSTDDKCKVDNSIDCWEP-ALEDVEGEYWRIVDKATEEIEVL 332
Query: 149 FWLEMTHGRKGTVEYGVNIEGSAFSSDPNDQLGKCKWHLKTLRGLPQSIFRFLEHIIPGI 208
+ ++ G G+ ++ +A SS+ D+ K W+L LP S+ ++ I G+
Sbjct: 333 YGADLETGVFGSGFPKISSSHNASSSE--DKYAKSGWNLNNFPRLPGSLLKYEGSDISGV 390
Query: 209 TDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQVYSRD 268
P LYIGM FS F WHVEDH+L+S+NY H GAPK WYGV G A++ E+ R + D
Sbjct: 391 LVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKLWYGVGGKDAVKLEEAMRKHL--PD 448
Query: 269 ILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFSNGFN 328
+ E+ +++ + T P L GV V++ VQ GEFV+TFPR YHAGF++GFN
Sbjct: 449 LF----EEQP-DLLHKLVTQLSPSKLKTAGVPVHRCVQHAGEFVLTFPRAYHAGFNSGFN 503
Query: 329 CGEAVNFAIRDWFPFGEEAGKRYARLHKMVILPYQELLFKEVSE 372
C EAVN A DW P G+ A + Y + + + + +LL E
Sbjct: 504 CAEAVNVAPVDWLPHGQIAIELYCQQGRKTSISHDKLLLGAARE 547
Score = 117 (46.2 bits), Expect = 4.1e-46, Sum P(2) = 4.1e-46
Identities = 18/39 (46%), Positives = 28/39 (71%)
Query: 32 ISDCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISP 70
+ D P +YP+ +EF+D Y+ KI PEA ++GIC+I+ P
Sbjct: 143 LEDAPVFYPSEEEFEDTLNYIAKIRPEAEKYGICRIVPP 181
>WB|WBGene00004319 [details] [associations]
symbol:rbr-2 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0034648
"histone demethylase activity (H3-dimethyl-K4 specific)"
evidence=IDA] [GO:0034647 "histone demethylase activity
(H3-trimethyl-K4 specific)" evidence=IDA] [GO:0034720 "histone
H3-K4 demethylation" evidence=IMP;IDA] [GO:0040028 "regulation of
vulval development" evidence=IMP] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0008340 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0034648 GO:GO:0040028 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:Z69385 eggNOG:NOG327026
GeneTree:ENSGT00530000063118 GO:GO:0034647 KO:K11446 HSSP:Q14839
PIR:T27924 RefSeq:NP_502032.2 ProteinModelPortal:Q23541 SMR:Q23541
STRING:Q23541 PaxDb:Q23541 EnsemblMetazoa:ZK593.4 GeneID:177985
KEGG:cel:CELE_ZK593.4 UCSC:ZK593.4 CTD:177985 WormBase:ZK593.4
HOGENOM:HOG000113216 InParanoid:Q23541 OMA:KANQLLF NextBio:899238
Uniprot:Q23541
Length = 1477
Score = 402 (146.6 bits), Expect = 1.5e-45, Sum P(3) = 1.5e-45
Identities = 106/326 (32%), Positives = 155/326 (47%)
Query: 145 VEKKFWLEM-THGRKGTVEYGVNI----EGSAFSSDPNDQLG---KCK-------WHLKT 189
VE+ FW + +H +V+YG ++ GS F + G K K W+L
Sbjct: 419 VERSFWKNVISHENPVSVKYGADLITSRVGSGFPRKEDKHTGPDLKLKQQYASHAWNLNN 478
Query: 190 LRGLPQSIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVP 249
+ L +S+ I G+ P +Y+GM FS F WH EDH+ +S+NY+H G K WYGV
Sbjct: 479 MPVLRESVLSHFNTGISGMMVPWVYVGMCFSTFCWHTEDHWTYSVNYNHFGERKIWYGVG 538
Query: 250 GHHALQFEKVARNQVYSRDILSAAGEDGAF-EVIAEKTTIFPPKILLDNGVSVYKAVQKP 308
G A +FE + A G G ++ TT P +L GV ++ Q
Sbjct: 539 GEDAEKFEDALKK--------IAPGLTGRQRDLFHHMTTAANPHLLRSLGVPIHSVHQNA 590
Query: 309 GEFVITFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHKMVILPYQELLFK 368
GEFVITFPR YHAGF+ G N EAVNFA DW G E + Y+ + + ++ + ELLFK
Sbjct: 591 GEFVITFPRAYHAGFNEGLNFAEAVNFAPIDWLSKGRECVESYSNVRRYLVFSHDELLFK 650
Query: 369 EVSEHEGTDIPSSVKA-----TVLHQIRSLNNALFCL--NNLKMP---FDYLQNSQGSFV 418
V + I S+ + + + L L L +N +M F+ + + Q S
Sbjct: 651 MVEAMDKLGISMSLATHEELIRIYEKQKMLRELLARLGVSNRQMQQVMFEKIPDEQRS-- 708
Query: 419 CDLCKRDCYLAFTECKSCQRYTCLFH 444
C CK ++ C ++ TC+ H
Sbjct: 709 CRFCKTTLFMCALVCNKHKKMTCVEH 734
Score = 108 (43.1 bits), Expect = 1.5e-45, Sum P(3) = 1.5e-45
Identities = 26/62 (41%), Positives = 33/62 (53%)
Query: 36 PAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISPVKASVSAADVLKKEIKGFEFGTYRQ 95
P YYPT +EF DP Y+ KI EA +FG+ KI+ P A+ + KE F F Q
Sbjct: 57 PIYYPTEEEFSDPIEYVAKIRHEAEKFGVVKIVPP--ANFKPPFAIDKE--AFTFRPRTQ 112
Query: 96 PL 97
L
Sbjct: 113 KL 114
Score = 37 (18.1 bits), Expect = 1.5e-45, Sum P(3) = 1.5e-45
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 431 TECKSCQRYTCL 442
+E KSCQ CL
Sbjct: 1409 SEFKSCQARACL 1420
>UNIPROTKB|Q23541 [details] [associations]
symbol:rbr-2 "Lysine-specific demethylase rbr-2"
species:6239 "Caenorhabditis elegans" [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=IDA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005634 GO:GO:0008340
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 GO:GO:0040028
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 EMBL:Z69385
eggNOG:NOG327026 GeneTree:ENSGT00530000063118 GO:GO:0034647
KO:K11446 HSSP:Q14839 PIR:T27924 RefSeq:NP_502032.2
ProteinModelPortal:Q23541 SMR:Q23541 STRING:Q23541 PaxDb:Q23541
EnsemblMetazoa:ZK593.4 GeneID:177985 KEGG:cel:CELE_ZK593.4
UCSC:ZK593.4 CTD:177985 WormBase:ZK593.4 HOGENOM:HOG000113216
InParanoid:Q23541 OMA:KANQLLF NextBio:899238 Uniprot:Q23541
Length = 1477
Score = 402 (146.6 bits), Expect = 1.5e-45, Sum P(3) = 1.5e-45
Identities = 106/326 (32%), Positives = 155/326 (47%)
Query: 145 VEKKFWLEM-THGRKGTVEYGVNI----EGSAFSSDPNDQLG---KCK-------WHLKT 189
VE+ FW + +H +V+YG ++ GS F + G K K W+L
Sbjct: 419 VERSFWKNVISHENPVSVKYGADLITSRVGSGFPRKEDKHTGPDLKLKQQYASHAWNLNN 478
Query: 190 LRGLPQSIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVP 249
+ L +S+ I G+ P +Y+GM FS F WH EDH+ +S+NY+H G K WYGV
Sbjct: 479 MPVLRESVLSHFNTGISGMMVPWVYVGMCFSTFCWHTEDHWTYSVNYNHFGERKIWYGVG 538
Query: 250 GHHALQFEKVARNQVYSRDILSAAGEDGAF-EVIAEKTTIFPPKILLDNGVSVYKAVQKP 308
G A +FE + A G G ++ TT P +L GV ++ Q
Sbjct: 539 GEDAEKFEDALKK--------IAPGLTGRQRDLFHHMTTAANPHLLRSLGVPIHSVHQNA 590
Query: 309 GEFVITFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHKMVILPYQELLFK 368
GEFVITFPR YHAGF+ G N EAVNFA DW G E + Y+ + + ++ + ELLFK
Sbjct: 591 GEFVITFPRAYHAGFNEGLNFAEAVNFAPIDWLSKGRECVESYSNVRRYLVFSHDELLFK 650
Query: 369 EVSEHEGTDIPSSVKA-----TVLHQIRSLNNALFCL--NNLKMP---FDYLQNSQGSFV 418
V + I S+ + + + L L L +N +M F+ + + Q S
Sbjct: 651 MVEAMDKLGISMSLATHEELIRIYEKQKMLRELLARLGVSNRQMQQVMFEKIPDEQRS-- 708
Query: 419 CDLCKRDCYLAFTECKSCQRYTCLFH 444
C CK ++ C ++ TC+ H
Sbjct: 709 CRFCKTTLFMCALVCNKHKKMTCVEH 734
Score = 108 (43.1 bits), Expect = 1.5e-45, Sum P(3) = 1.5e-45
Identities = 26/62 (41%), Positives = 33/62 (53%)
Query: 36 PAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISPVKASVSAADVLKKEIKGFEFGTYRQ 95
P YYPT +EF DP Y+ KI EA +FG+ KI+ P A+ + KE F F Q
Sbjct: 57 PIYYPTEEEFSDPIEYVAKIRHEAEKFGVVKIVPP--ANFKPPFAIDKE--AFTFRPRTQ 112
Query: 96 PL 97
L
Sbjct: 113 KL 114
Score = 37 (18.1 bits), Expect = 1.5e-45, Sum P(3) = 1.5e-45
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 431 TECKSCQRYTCL 442
+E KSCQ CL
Sbjct: 1409 SEFKSCQARACL 1420
>UNIPROTKB|D4A3B4 [details] [associations]
symbol:D4A3B4 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 IPI:IPI00949627
Ensembl:ENSRNOT00000067288 ArrayExpress:D4A3B4 Uniprot:D4A3B4
Length = 1490
Score = 423 (154.0 bits), Expect = 3.4e-45, Sum P(2) = 3.4e-45
Identities = 97/252 (38%), Positives = 136/252 (53%)
Query: 140 LPPSYVEKKFW-LEMTHGRKGTVEYGVNIE----GSAFS-SD------PNDQ-LGKCKWH 186
+P VEK+FW L + TVEYG +I GS F SD P ++ W+
Sbjct: 375 VPTELVEKEFWRLVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWN 434
Query: 187 LKTLRGLPQSIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWY 246
L + L QS+ + I G+ P LY+GM+FS F WH+EDH+ +SINY H G PKTWY
Sbjct: 435 LNVMPVLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWY 494
Query: 247 GVPGHHALQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQ 306
GVP A E+V + L+ D +++ + T+ P L+ +GV V + Q
Sbjct: 495 GVPSLAAEHLEEVMKK-------LTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQ 547
Query: 307 KPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHKMVILPYQELL 366
GEFVITFPR YH+GF+ G+N EAVNF DW P G + + Y RL + + ++EL+
Sbjct: 548 CAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELI 607
Query: 367 FKEVSEHEGTDI 378
K + E D+
Sbjct: 608 CKMAACPEKLDL 619
Score = 96 (38.9 bits), Expect = 3.4e-45, Sum P(2) = 3.4e-45
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 34 DCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISP 70
+CP + P+ EF DP Y+ KI P A + GICKI P
Sbjct: 13 ECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPP 49
>UNIPROTKB|B3KV94 [details] [associations]
symbol:JARID1B "cDNA FLJ16281 fis, clone NT2RI3003104,
highly similar to Homo sapiens Jumonji, AT rich interactive domain
1B (RBP2-like) (JARID1B), mRNA" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0032453 "histone demethylase activity (H3-K4 specific)"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 EMBL:CH471067 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0032453
HOGENOM:HOG000290719 EMBL:AC098934 EMBL:AC104463 UniGene:Hs.443650
HGNC:HGNC:18039 ChiTaRS:KDM5B HOVERGEN:HBG068574 EMBL:AK122752
IPI:IPI00877939 SMR:B3KV94 STRING:B3KV94 Ensembl:ENST00000235790
Uniprot:B3KV94
Length = 1275
Score = 486 (176.1 bits), Expect = 4.3e-45, P = 4.3e-45
Identities = 129/369 (34%), Positives = 185/369 (50%)
Query: 110 FFSGERKHTYDTFE--SEAIKMLKRQSPRLGDLPPSYVEKKFW-LEMTHGRKGTVEYGVN 166
F R +T TF ++A K P + +P VEK+FW L T TVEYG +
Sbjct: 212 FEQAARDYTLRTFGEMADAFKSDYFNMP-VHMVPTELVEKEFWRLVSTIEEDVTVEYGAD 270
Query: 167 IEGSAFSSDPNDQLGKCK------------WHLKTLRGLPQSIFRFLEHIIPGITDPMLY 214
I F S + GK K W+L + + QS+ + I G+ P LY
Sbjct: 271 IASKEFGSGFPVRDGKIKLSPEEEEYLDSGWNLNNMPVMEQSVLAHITADICGMKLPWLY 330
Query: 215 IGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQVYSRDILSAAG 274
+GM FS F WH+EDH+ +SINY H G PKTWYGVPG+ A Q E V + L +
Sbjct: 331 VGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLENVMKKLAPE---LFVSQ 387
Query: 275 EDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFSNGFNCGEAVN 334
D ++ + TI P L+ + V VY+ Q GEFVITFPR YH+GF+ GFN EAVN
Sbjct: 388 PD----LLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVN 443
Query: 335 FAIRDWFPFGEEAGKRYARLHKMVILPYQELLFKEVSEHEGTDI--PSSVK---ATVLHQ 389
F DW P G + + Y LH+ + + E++ K S+ + D+ S+V+ A ++
Sbjct: 444 FCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLDVVVASTVQKDMAIMIED 503
Query: 390 IRSLNNA---LFCLNNLKMPFDYLQNSQGSFVCDLCKRDCYLAFTECKSCQR--YTCLFH 444
++L L +++ +M F+ L + + C CK C+++ C SC+ CL H
Sbjct: 504 EKALRETVRKLGVIDSERMDFELLPDDERQ--CVKCKTTCFMSAISC-SCKPGLLVCL-H 559
Query: 445 EFKSRHCSC 453
K CSC
Sbjct: 560 HVKEL-CSC 567
>UNIPROTKB|F1PJS3 [details] [associations]
symbol:KDM5B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
GeneTree:ENSGT00530000063118 OMA:CENEKEM EMBL:AAEX03004965
Ensembl:ENSCAFT00000016655 Uniprot:F1PJS3
Length = 1476
Score = 486 (176.1 bits), Expect = 5.7e-45, P = 5.7e-45
Identities = 129/369 (34%), Positives = 185/369 (50%)
Query: 110 FFSGERKHTYDTFE--SEAIKMLKRQSPRLGDLPPSYVEKKFW-LEMTHGRKGTVEYGVN 166
F R +T TF ++A K P + +P VEK+FW L T TVEYG +
Sbjct: 302 FEQAARDYTLRTFGEMADAFKSDYFNMP-VHMVPTELVEKEFWRLVSTIEEDVTVEYGAD 360
Query: 167 IEGSAFSSDPNDQLGKCK------------WHLKTLRGLPQSIFRFLEHIIPGITDPMLY 214
I F S + GK K W+L + + QS+ + I G+ P LY
Sbjct: 361 IASKEFGSGFPVRDGKIKLSPEEEEYLDSGWNLNNMPVMEQSVLAHITADICGMKLPWLY 420
Query: 215 IGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQVYSRDILSAAG 274
+GM FS F WH+EDH+ +SINY H G PKTWYGVPG+ A Q E V + L +
Sbjct: 421 VGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLENVMKKLAPE---LFVSQ 477
Query: 275 EDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFSNGFNCGEAVN 334
D ++ + TI P L+ + V VY+ Q GEFVITFPR YH+GF+ GFN EAVN
Sbjct: 478 PD----LLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVN 533
Query: 335 FAIRDWFPFGEEAGKRYARLHKMVILPYQELLFKEVSEHEGTDI--PSSVK---ATVLHQ 389
F DW P G + + Y LH+ + + E++ K S+ + D+ S+V+ A ++
Sbjct: 534 FCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLDVVVASTVQKDMAIMIED 593
Query: 390 IRSLNNA---LFCLNNLKMPFDYLQNSQGSFVCDLCKRDCYLAFTECKSCQR--YTCLFH 444
++L L +++ +M F+ L + + C CK C+++ C SC+ CL H
Sbjct: 594 EKALRETVRKLGVIDSERMDFELLPDDERQ--CIKCKTTCFMSAISC-SCKPGLLVCL-H 649
Query: 445 EFKSRHCSC 453
K CSC
Sbjct: 650 HVKEL-CSC 657
>UNIPROTKB|F1MUR2 [details] [associations]
symbol:KDM5B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0034648 "histone demethylase
activity (H3-dimethyl-K4 specific)" evidence=IEA] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 GeneTree:ENSGT00530000063118
GO:GO:0034647 OMA:CENEKEM EMBL:DAAA02043305 IPI:IPI01001710
Ensembl:ENSBTAT00000028871 Uniprot:F1MUR2
Length = 1484
Score = 479 (173.7 bits), Expect = 3.2e-44, P = 3.2e-44
Identities = 126/369 (34%), Positives = 185/369 (50%)
Query: 110 FFSGERKHTYDTFE--SEAIKMLKRQSPRLGDLPPSYVEKKFW-LEMTHGRKGTVEYGVN 166
F R +T TF ++A K P + +P VEK+FW L T TVEYG +
Sbjct: 310 FEQAARDYTLRTFGEMADAFKSDYFNMP-VHMVPTELVEKEFWRLVSTIEEDVTVEYGAD 368
Query: 167 IEGSAFSSDPNDQLGKCK------------WHLKTLRGLPQSIFRFLEHIIPGITDPMLY 214
I F S + GK K W+L + + QS+ + I G+ P LY
Sbjct: 369 IASKEFGSGFPVRDGKVKLSPEEEEYLDSGWNLNNMPVMEQSVLAHITADICGMKLPWLY 428
Query: 215 IGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQVYSRDILSAAG 274
+GM FS F WH+EDH+ +SINY H G PKTWYGVPG+ A Q E V + ++ +S
Sbjct: 429 VGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLETVMK-KLAPELFISQP- 486
Query: 275 EDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFSNGFNCGEAVN 334
+++ + TI P L+ + V VY+ Q GEFVITFPR YH+GF+ GFN EAVN
Sbjct: 487 -----DLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVN 541
Query: 335 FAIRDWFPFGEEAGKRYARLHKMVILPYQELLFKEVSEHEGTDI--PSSVK---ATVLHQ 389
F DW P G + + Y LH+ + + E++ K S+ + D+ S+V+ A ++
Sbjct: 542 FCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLDVVVASTVQKDMAIMIED 601
Query: 390 IRSLNNA---LFCLNNLKMPFDYLQNSQGSFVCDLCKRDCYLAFTECKSCQR--YTCLFH 444
++L L +++ +M F+ L + + C CK C+++ C C+ CL H
Sbjct: 602 EKALRETVRKLGVIDSERMDFELLPDDERQ--CVKCKTTCFMSALSC-CCKPGLLVCLHH 658
Query: 445 EFKSRHCSC 453
CSC
Sbjct: 659 V--QELCSC 665
>CGD|CAL0000662 [details] [associations]
symbol:orf19.5651 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0034647 "histone
demethylase activity (H3-trimethyl-K4 specific)" evidence=IEA]
[GO:0034648 "histone demethylase activity (H3-dimethyl-K4
specific)" evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR019787 Pfam:PF00628 Pfam:PF02373 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 CGD:CAL0000662
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR019786 PROSITE:PS01359
EMBL:AACQ01000129 EMBL:AACQ01000128 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 eggNOG:NOG327026 RefSeq:XP_713332.1
RefSeq:XP_713379.1 ProteinModelPortal:Q59UR9 STRING:Q59UR9
GeneID:3644970 GeneID:3645037 KEGG:cal:CaO19.13096
KEGG:cal:CaO19.5651 Uniprot:Q59UR9
Length = 723
Score = 376 (137.4 bits), Expect = 6.1e-40, Sum P(2) = 6.1e-40
Identities = 101/294 (34%), Positives = 148/294 (50%)
Query: 139 DLPPSYVEKKFWLEMTHGRKGTVE-YGVNIEGSAFSSDPNDQLG-KCKWHLKTLRGLPQS 196
D S +E K+ ++ + R G V + + S ++DP Q W+L L S
Sbjct: 281 DAEKSDLEVKYGADIHNLRPGEVSGFPMADTPSLDTTDPAIQYYINHPWNLNKLPFSNGS 340
Query: 197 IFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQF 256
+ F+ I G+T P +YIG L S F WHVEDHY S NY H GA K WYG+P A +F
Sbjct: 341 LLNFINTSISGMTIPWIYIGSLLSTFCWHVEDHYTLSANYCHFGATKKWYGIPSSFADKF 400
Query: 257 EKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFP 316
EK+ R+ + D+ + ++ + T+ P L+++G+ A Q EFVIT+P
Sbjct: 401 EKLMRDS--APDLFKRQPD-----LLHQLVTLMSPSKLVEHGIPCVYADQNSNEFVITYP 453
Query: 317 RVYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHKMVILPYQELLFKEVSEHEGT 376
VYHAGF+ GFN EAVNFAI +W FGE++ Y + K + + ELL +S
Sbjct: 454 LVYHAGFNCGFNFNEAVNFAIDEWLEFGEKSVNDYRPIKKENVFNHYELLENILSRFNAK 513
Query: 377 -DIPSS-VKATVLHQIRSLNNALFCLNNLK--MPFDY---LQNSQGSFVCDLCK 423
D+ VK ++ R ++ L LK +Y + N+ +CD CK
Sbjct: 514 HDVSLDLVKRSLWSFERYVSRLEELLAQLKDKSTVEYKPSVDNNDEDDLCDSCK 567
Score = 81 (33.6 bits), Expect = 6.1e-40, Sum P(2) = 6.1e-40
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 32 ISDCPAYYPTLQEFDDPFIYLQ--KIAPEASQFGICKIISP 70
++ CP PT QEF+DP YL K++ + +G+ KI+ P
Sbjct: 8 LTPCPVLTPTDQEFNDPVGYLSSDKVSKLGATYGLVKIVPP 48
Score = 44 (20.5 bits), Expect = 4.7e-36, Sum P(2) = 4.7e-36
Identities = 13/32 (40%), Positives = 16/32 (50%)
Query: 19 YKFKFSDVDWTHKISDCPAYYPTLQEFDDPFI 50
Y F DVD + I P +Y Q+FD FI
Sbjct: 231 YGFD-EDVDVKYTI---PEFYKMCQDFDAKFI 258
>TAIR|locus:2031290 [details] [associations]
symbol:AT1G63490 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0016926 "protein desumoylation"
evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 Pfam:PF02373 Pfam:PF02928
Pfam:PF08429 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 GO:GO:0003700 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 eggNOG:NOG327026 KO:K11446
EMBL:AY039958 EMBL:BT011572 IPI:IPI00545053 RefSeq:NP_564814.1
UniGene:At.22811 ProteinModelPortal:Q94BQ7 SMR:Q94BQ7 PRIDE:Q94BQ7
EnsemblPlants:AT1G63490.1 GeneID:842655 KEGG:ath:AT1G63490
TAIR:At1g63490 HOGENOM:HOG000084215 InParanoid:Q94BQ7 OMA:WAGSEMD
PhylomeDB:Q94BQ7 ProtClustDB:CLSN2689007 ArrayExpress:Q94BQ7
Genevestigator:Q94BQ7 Uniprot:Q94BQ7
Length = 1116
Score = 418 (152.2 bits), Expect = 7.3e-40, Sum P(2) = 7.3e-40
Identities = 81/182 (44%), Positives = 110/182 (60%)
Query: 185 WHLKTLRGLPQSIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKT 244
W+L + L S+ + + H I G+T P LY+GMLFS F WH EDH +S+NY H G K
Sbjct: 39 WNLNNMPKLKGSMLQAIRHNINGVTVPWLYLGMLFSSFCWHFEDHCFYSVNYLHWGEAKC 98
Query: 245 WYGVPGHHALQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKA 304
WYG+PG A FEKV R + D+ A D F+++ T+ P +L +N V VY
Sbjct: 99 WYGIPGSAASAFEKVMRKTL--PDLFDAQ-PDLLFQLV----TMLSPTVLQENKVPVYTV 151
Query: 305 VQKPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHKMVILPYQE 364
+Q+PG FVITFP+ +HAGF+ G NC EAVNFA DW P+G + Y K ++ ++E
Sbjct: 152 LQEPGNFVITFPKSFHAGFNFGLNCAEAVNFATADWLPYGGSGAELYRLYRKPSVISHEE 211
Query: 365 LL 366
LL
Sbjct: 212 LL 213
Score = 46 (21.3 bits), Expect = 7.3e-40, Sum P(2) = 7.3e-40
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 135 PRLGDLPPSYVEKKFWLE 152
PR+GD P VE W E
Sbjct: 16 PRIGDQRPESVEADIWDE 33
>UNIPROTKB|Q6B0I6 [details] [associations]
symbol:KDM4D "Lysine-specific demethylase 4D" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 EMBL:CH471065 GO:GO:0046872
GO:GO:0006351 GO:GO:0016568 GO:GO:0016702 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 PDB:4HON PDBsum:4HON eggNOG:NOG317950
OMA:FASKRWI HOGENOM:HOG000231125 KO:K06709 EMBL:AK001113
EMBL:AK056162 EMBL:AP002383 EMBL:BC074739 EMBL:BC119010
EMBL:BC122858 EMBL:AL137545 IPI:IPI00017991 PIR:T46388
RefSeq:NP_060509.2 UniGene:Hs.503598 PDB:3DXT PDB:3DXU PDB:4HOO
PDBsum:3DXT PDBsum:3DXU PDBsum:4HOO ProteinModelPortal:Q6B0I6
SMR:Q6B0I6 DIP:DIP-29606N IntAct:Q6B0I6 STRING:Q6B0I6
PhosphoSite:Q6B0I6 DMDM:239938885 PRIDE:Q6B0I6
Ensembl:ENST00000335080 Ensembl:ENST00000536741
Ensembl:ENST00000570915 Ensembl:ENST00000576429 GeneID:55693
KEGG:hsa:55693 UCSC:uc001pfe.3 CTD:55693 GeneCards:GC11P094706
HGNC:HGNC:25498 MIM:609766 neXtProt:NX_Q6B0I6 PharmGKB:PA164721552
InParanoid:Q6B0I6 OrthoDB:EOG4F7NJR PhylomeDB:Q6B0I6
ChEMBL:CHEMBL6138 EvolutionaryTrace:Q6B0I6 GenomeRNAi:55693
NextBio:60511 Bgee:Q6B0I6 CleanEx:HS_JMJD2D Genevestigator:Q6B0I6
GermOnline:ENSG00000186280 Uniprot:Q6B0I6
Length = 523
Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
Identities = 79/205 (38%), Positives = 117/205 (57%)
Query: 145 VEKKFWLEMTHGRKGTVEYGVNIEGSAFSSDPNDQLGKCKWHLKTLRGLPQSIFRFLEHI 204
+E+K+W + + YG +I GS F D N + +W+L L + + + +
Sbjct: 121 LERKYWKNRIYN---SPIYGADISGSLF--DENTK----QWNLGHLGTIQDLLEKECGVV 171
Query: 205 IPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQV 264
I G+ P LY GM + FAWH ED L+SINY H G PKTWY VP H + E++AR ++
Sbjct: 172 IEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHLGEPKTWYVVPPEHGQRLERLAR-EL 230
Query: 265 YSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFS 324
+ S+ G GAF + K + P +L +NG+ + Q+ GEF++TFP YHAGF+
Sbjct: 231 FPG---SSRG-CGAF--LRHKVALISPTVLKENGIPFNRITQEAGEFMVTFPYGYHAGFN 284
Query: 325 NGFNCGEAVNFAIRDWFPFGEEAGK 349
+GFNC EA+NFA W +G+ A +
Sbjct: 285 HGFNCAEAINFATPRWIDYGKMASQ 309
Score = 216 (81.1 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 71/227 (31%), Positives = 109/227 (48%)
Query: 38 YYPTLQEFDDPFIYLQKIAPE-ASQFGICKIISPVKASVSAADVLKKEIKGFEFGTYRQP 96
++PT +EF+D Y+ + + A + G+ KII P + A + I T P
Sbjct: 21 FHPTKEEFNDFDKYIAYMESQGAHRAGLAKIIPPKEWK--ARETYDN-ISEILIAT---P 74
Query: 97 LRLPKWNANDTGVFFSGERKHTYDTF-ESEAIKMLKR-QSPRLGDLPPSYVEKKFWLEMT 154
L+ + + GVF +K T E + K+ Q+P + +E+K+W
Sbjct: 75 LQ--QVASGRAGVFTQYHKKKKAMTVGEYRHLANSKKYQTPPHQNFED--LERKYWKNRI 130
Query: 155 HGRKGTVEYGVNIEGSAFSSDPNDQLGKCKWHLKTLRGLPQSIFRFLEHIIPGITDPMLY 214
+ + YG +I GS F D N + +W+L L + + + +I G+ P LY
Sbjct: 131 YN---SPIYGADISGSLF--DENTK----QWNLGHLGTIQDLLEKECGVVIEGVNTPYLY 181
Query: 215 IGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVAR 261
GM + FAWH ED L+SINY H G PKTWY VP H + E++AR
Sbjct: 182 FGMWKTTFAWHTEDMDLYSINYLHLGEPKTWYVVPPEHGQRLERLAR 228
>MGI|MGI:3606484 [details] [associations]
symbol:Kdm4d "lysine (K)-specific demethylase 4D"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016702 "oxidoreductase activity,
acting on single donors with incorporation of molecular oxygen,
incorporation of two atoms of oxygen" evidence=IEA] [GO:0033169
"histone H3-K9 demethylation" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00558 MGI:MGI:3606484 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0006351 GO:GO:0016568 GO:GO:0016702
EMBL:CT485607 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
GeneTree:ENSGT00530000063342 eggNOG:NOG317950 OMA:FASKRWI
HOGENOM:HOG000231125 KO:K06709 CTD:55693 OrthoDB:EOG4F7NJR
EMBL:AK030020 EMBL:AK155227 EMBL:BC112372 IPI:IPI00651810
RefSeq:NP_775609.2 UniGene:Mm.240457 ProteinModelPortal:Q3U2K5
SMR:Q3U2K5 PhosphoSite:Q3U2K5 PRIDE:Q3U2K5 DNASU:244694
Ensembl:ENSMUST00000058796 Ensembl:ENSMUST00000115647 GeneID:244694
KEGG:mmu:244694 UCSC:uc009oen.1 InParanoid:A2CGB5 NextBio:386391
Bgee:Q3U2K5 CleanEx:MM_JMJD2D Genevestigator:Q3U2K5 Uniprot:Q3U2K5
Length = 510
Score = 354 (129.7 bits), Expect = 3.7e-33, Sum P(2) = 3.7e-33
Identities = 74/205 (36%), Positives = 110/205 (53%)
Query: 145 VEKKFWLEMTHGRKGTVEYGVNIEGSAFSSDPNDQLGKCKWHLKTLRGLPQSIFRFLEHI 204
+E+K+W + + + YG ++ GS F D Q +W++ L + + + +
Sbjct: 118 LERKYWKNRLY--ESPI-YGADVSGSLF--DGKTQ----QWNVGHLGTIQDLLEQECGIV 168
Query: 205 IPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQV 264
I G+ P LY GM + FAWH ED L+SINY H G PKTWY VP H + E++AR
Sbjct: 169 IEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGQPKTWYAVPPEHGRRLERLARE-- 226
Query: 265 YSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFS 324
L G + K + P +L +NG+ + Q+ GEF++TFP YHAGF+
Sbjct: 227 -----LFPGSSQGCQAFLRHKVALISPTVLKENGIPFGRITQEAGEFMVTFPYGYHAGFN 281
Query: 325 NGFNCGEAVNFAIRDWFPFGEEAGK 349
+GFNC EA+NFA W +G+ A +
Sbjct: 282 HGFNCAEAINFATPRWIDYGKVASQ 306
Score = 37 (18.1 bits), Expect = 3.7e-33, Sum P(2) = 3.7e-33
Identities = 17/55 (30%), Positives = 24/55 (43%)
Query: 67 IISPVKASVSA-ADVLK---KEIKGFEFGTYRQPLRLPKWNANDTGVFFSGERKH 117
I +P++ VS A V K+ KG G YR+ K+ F ERK+
Sbjct: 68 IATPLQQVVSGQAGVFTQYHKKKKGMTVGEYRELANSKKYQTPPHLDFEDLERKY 122
>UNIPROTKB|Q9U297 [details] [associations]
symbol:jmjd-2 "Lysine-specific demethylase 4" species:6239
"Caenorhabditis elegans" [GO:0070544 "histone H3-K36 demethylation"
evidence=IMP] [GO:0051864 "histone demethylase activity (H3-K36
specific)" evidence=IMP] [GO:0016577 "histone demethylation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00249 SMART:SM00558 GO:GO:0005634 GO:GO:0045892
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 GO:GO:0016702
EMBL:AL110490 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063342 GO:GO:0051864
eggNOG:NOG317950 KO:K06709 PIR:T27007 RefSeq:NP_496969.2
ProteinModelPortal:Q9U297 SMR:Q9U297 DIP:DIP-26971N
MINT:MINT-1077527 STRING:Q9U297 PaxDb:Q9U297
EnsemblMetazoa:Y48B6A.11 GeneID:175080 KEGG:cel:CELE_Y48B6A.11
UCSC:Y48B6A.11 CTD:175080 WormBase:Y48B6A.11 HOGENOM:HOG000021888
InParanoid:Q9U297 OMA:SSEHADR NextBio:886668 Uniprot:Q9U297
Length = 922
Score = 360 (131.8 bits), Expect = 6.8e-32, P = 6.8e-32
Identities = 100/322 (31%), Positives = 154/322 (47%)
Query: 33 SDCPAYYPTLQEFDDPFIYLQKIAPEASQF--GICKIISPVKASVSAADVLKKEIKGFEF 90
S+ +YPT++EF + Y++KI GI KI++P + +K+ +
Sbjct: 85 SEVLTFYPTMREFKNFSQYIKKIEQNGGHLKAGIAKIVAPEGWTPRPT---RKDFSDVDD 141
Query: 91 GTYRQPLRLPKWNANDTGVFFSGE----RKHTYDTFESEAIKMLKRQSPRLGDLPPSYVE 146
QP R G +F RK F + A + ++PR DL S +E
Sbjct: 142 YEITQPARETIEATEKPGAYFKRNVTCRRKMPVREFRTLA-NSAQYRNPR-PDLKGSEIE 199
Query: 147 KKFWLEMTHGRKGTVEYGVNIEGSAFSSDPNDQLGKCKWHLKTLRGLPQSIFRFLEHIIP 206
K ++ + HG YG + EGS + + + W++ L G +I + I
Sbjct: 200 KHYFDNILHGEP---IYGADTEGSFYDAQVEE------WNMNRL-G---TILEDTNYEIK 246
Query: 207 GITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQV-Y 265
G+ LY GM + F WH ED L+SIN+ H GAPK W+ + HA +FE+ Q Y
Sbjct: 247 GVNTVYLYFGMYKTTFPWHAEDMDLYSINFLHFGAPKYWFAISSEHADRFERFMSQQFSY 306
Query: 266 SRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFSN 325
+ A + AF + KT + P++L G+ VQ+P EF+ITFPR YH GF+
Sbjct: 307 QNEY---APQCKAF--LRHKTYLVTPELLRQAGIPYATMVQRPNEFIITFPRGYHMGFNL 361
Query: 326 GFNCGEAVNFAIRDWFPFGEEA 347
G+N E+ NFA + W +G++A
Sbjct: 362 GYNLAESTNFASQRWIDYGKDA 383
>SGD|S000003880 [details] [associations]
symbol:JHD2 "JmjC domain family histone demethylase specific
for H3-K4" species:4932 "Saccharomyces cerevisiae" [GO:0032453
"histone demethylase activity (H3-K4 specific)" evidence=IDA;IMP]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0016577 "histone demethylation" evidence=IDA;IMP] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR019787 Pfam:PF00628 Pfam:PF02373 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 SGD:S000003880
GO:GO:0005634 GO:GO:0005737 EMBL:BK006943 GO:GO:0046872
GO:GO:0008270 GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GeneTree:ENSGT00530000063118
EMBL:Z49619 EMBL:Z49620 PIR:S57142 RefSeq:NP_012653.1
ProteinModelPortal:P47156 SMR:P47156 DIP:DIP-4835N IntAct:P47156
MINT:MINT-537060 STRING:P47156 PaxDb:P47156 EnsemblFungi:YJR119C
GeneID:853583 KEGG:sce:YJR119C CYGD:YJR119c HOGENOM:HOG000113131
OMA:RNISGMT OrthoDB:EOG44N21B NextBio:974376 Genevestigator:P47156
GermOnline:YJR119C GO:GO:0032453 Uniprot:P47156
Length = 728
Score = 330 (121.2 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 76/201 (37%), Positives = 103/201 (51%)
Query: 178 DQLGKCKWHLKTLRGLPQ---SIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSI 234
D L C H L LP S+ + I G+T P +YIG LFS F WH+ED Y S
Sbjct: 378 DYLKYCD-HPMNLTNLPMAHNSLLPLFKRNISGMTIPWIYIGSLFSTFCWHMEDQYTLSA 436
Query: 235 NYHHSGAPKTWYGVPGHHALQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFP--PK 292
NY H G PK WY +P +F + + S D+ D +++ T I P P
Sbjct: 437 NYQHEGDPKVWYSIPESGCTKFNDLLNDM--SPDLFIKQ-PDLLHQLV---TLISPYDPN 490
Query: 293 ILLDNGVSVYKAVQKPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYA 352
+G+ VYKAVQKP E++ITFP+ YHAGF+ G+N EAVNF I W P+G A Y
Sbjct: 491 FK-KSGIPVYKAVQKPNEYIITFPKCYHAGFNTGYNFNEAVNFTIDFWLPYGFGAITDYK 549
Query: 353 RLHKMVILPYQELLFKEVSEH 373
K + +L+ + ++
Sbjct: 550 LTQKACVFDMFDLMINVLDKY 570
Score = 71 (30.1 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 32 ISDCPAYYPTLQEFDDPFIYLQK--IAPEASQFGICKIISP 70
+ + PA YPT QEF +P YL I ++G+ K++ P
Sbjct: 1 MEEIPALYPTEQEFKNPIDYLSNPHIKRLGVRYGMVKVVPP 41
>RGD|1591045 [details] [associations]
symbol:Kdm4d "lysine (K)-specific demethylase 4D" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0033169 "histone H3-K9 demethylation"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
RGD:1591045 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0016568 GO:GO:0016702 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 GeneTree:ENSGT00530000063342 eggNOG:NOG317950
HOGENOM:HOG000231125 KO:K06709 CTD:55693 OrthoDB:EOG4F7NJR
EMBL:BC128760 IPI:IPI00767164 RefSeq:NP_001073180.1
RefSeq:XP_003750480.1 RefSeq:XP_003750481.1 UniGene:Rn.202733
ProteinModelPortal:A1A5Q5 SMR:A1A5Q5 PRIDE:A1A5Q5
Ensembl:ENSRNOT00000033932 GeneID:100909834 GeneID:689582
KEGG:rno:100909834 KEGG:rno:689582 UCSC:RGD:1591045 NextBio:738978
Genevestigator:A1A5Q5 Uniprot:A1A5Q5
Length = 510
Score = 347 (127.2 bits), Expect = 2.2e-30, P = 2.2e-30
Identities = 73/205 (35%), Positives = 109/205 (53%)
Query: 145 VEKKFWLEMTHGRKGTVEYGVNIEGSAFSSDPNDQLGKCKWHLKTLRGLPQSIFRFLEHI 204
+E+K+W + + + YG ++ GS F D Q +W++ L + + + +
Sbjct: 118 LERKYWKNRLY--ESPI-YGADVSGSLF--DGKTQ----QWNVGHLGTIQDLLEQECGIV 168
Query: 205 IPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQV 264
I G+ P LY GM + FAWH ED L+SINY H G PKTWY VP H + E +A+
Sbjct: 169 IEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGQPKTWYAVPPEHGRRLELLAKE-- 226
Query: 265 YSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFS 324
L G + K + P +L +NG+ + Q+ GEF++TFP YHAGF+
Sbjct: 227 -----LFPGSSQGCQAFLRHKVALISPTVLKENGIPFGRITQEAGEFMVTFPYGYHAGFN 281
Query: 325 NGFNCGEAVNFAIRDWFPFGEEAGK 349
+GFNC EA+NFA W +G+ A +
Sbjct: 282 HGFNCAEAINFATPRWIDYGKVASQ 306
>FB|FBgn0033233 [details] [associations]
symbol:Kdm4A "Histone demethylase 4A" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0016577 "histone demethylation" evidence=ISS] [GO:0051864
"histone demethylase activity (H3-K36 specific)"
evidence=ISS;IDA;IMP] [GO:0033169 "histone H3-K9 demethylation"
evidence=IMP] [GO:0032454 "histone demethylase activity (H3-K9
specific)" evidence=IMP] [GO:0070544 "histone H3-K36 demethylation"
evidence=IMP] [GO:0010628 "positive regulation of gene expression"
evidence=IMP] InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00558 EMBL:AE013599 GO:GO:0005634 GO:GO:0045892
GO:GO:0046872 GO:GO:0006351 GO:GO:0016702 GO:GO:0010628
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 eggNOG:NOG317950
GO:GO:0032454 EMBL:AY058636 RefSeq:NP_610331.1 UniGene:Dm.4139
ProteinModelPortal:Q9V333 SMR:Q9V333 MINT:MINT-800097 STRING:Q9V333
PaxDb:Q9V333 PRIDE:Q9V333 EnsemblMetazoa:FBtr0088886 GeneID:35744
KEGG:dme:Dmel_CG15835 UCSC:CG15835-RA CTD:9682 FlyBase:FBgn0033233
InParanoid:Q9V333 OMA:FASKRWI OrthoDB:EOG46T1GM PhylomeDB:Q9V333
GenomeRNAi:35744 NextBio:795007 Bgee:Q9V333 GermOnline:CG15835
Uniprot:Q9V333
Length = 495
Score = 345 (126.5 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 104/338 (30%), Positives = 163/338 (48%)
Query: 18 SYKFKFSDVDWTHKISDCPAYYPTLQEFDDPFIYLQKIAPEASQF-GICKIISPVKASVS 76
S + F+D + +K+ + P+ +EF + Y++ I + G+ KI P
Sbjct: 2 STRSSFADEE-QNKVPRIMTFRPSYEEFQNFSAYIEYIESRGAHLAGLAKIQPP------ 54
Query: 77 AADVLKKEIKGFEFGTYRQPLRLPKWNA--NDTGVF----FSGERKHTYDTFESEAIKML 130
A V +K G++ + P GV+ R+ T F +A L
Sbjct: 55 AEWVPRKS--GYDIDNINMTIPAPICQVVTGAHGVYQQINIQQRRQMTLRQFMEKANSEL 112
Query: 131 KRQSPRLGDLPPSYVEKKFWLEMTHGRKGTVEYGVNIEGSAFSSDPND-QLGKCKWHLKT 189
Q+PR D +E+K+W +T+ + Y +++GS D + +G+ L T
Sbjct: 113 -HQTPRHFDYDD--LERKYWKNITYI---SPLYAADVKGSLSDEDLDVWNIGR----LDT 162
Query: 190 LRGLPQSIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVP 249
+ L + + II G+ LY GM S FAWH ED L+SINY H GAPKTWY +P
Sbjct: 163 ILNLVNTDYNI---IIDGVNTAYLYFGMWKSSFAWHTEDMDLYSINYLHFGAPKTWYAIP 219
Query: 250 GHHALQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPG 309
+ + EK+A N+ +S + E A+ + K T+ PK+L + + K Q+ G
Sbjct: 220 PAYGRRLEKLA-NETFSENYQ----ECNAY--LRHKMTMISPKVLRQHNIPYNKITQEAG 272
Query: 310 EFVITFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEA 347
E +ITFP YHAGF++GFN E+ NFA + W +G+ A
Sbjct: 273 EIMITFPFGYHAGFNHGFNGAESTNFASKRWIEYGKRA 310
>UNIPROTKB|B2RXH2 [details] [associations]
symbol:KDM4E "Lysine-specific demethylase 4E" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0016568 GO:GO:0016702 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 eggNOG:NOG317950 HOGENOM:HOG000231125 EMBL:AP002383
EMBL:BC157851 EMBL:BC157889 EMBL:BC171916 IPI:IPI00887640
RefSeq:NP_001155102.1 UniGene:Hs.714692 PDB:2W2I PDBsum:2W2I
ProteinModelPortal:B2RXH2 SMR:B2RXH2 PRIDE:B2RXH2
Ensembl:ENST00000450979 Ensembl:ENST00000576054 GeneID:390245
KEGG:hsa:390245 UCSC:uc010ruf.1 CTD:390245 GeneCards:GC11P094759
HGNC:HGNC:37098 neXtProt:NX_B2RXH2 PharmGKB:PA165543440 OMA:PESYELW
OrthoDB:EOG45491F BindingDB:B2RXH2 ChEMBL:CHEMBL1293226
EvolutionaryTrace:B2RXH2 GenomeRNAi:390245 NextBio:103576
Uniprot:B2RXH2
Length = 506
Score = 345 (126.5 bits), Expect = 4.2e-30, P = 4.2e-30
Identities = 81/206 (39%), Positives = 113/206 (54%)
Query: 145 VEKKFWLEMTHGRKGTVEYGVNIEGSAFSSDPND-QLGKCKWHLKTLRGLPQSIFRFLEH 203
+E+++W +H + YG +I GS F LG HL T+ L +
Sbjct: 118 LEQRYW--KSHPGNPPI-YGADISGSLFEESTKQWNLG----HLGTILDLLEQECGV--- 167
Query: 204 IIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQ 263
+I G+ P LY GM + FAWH ED L+SINY H G PKTWY VP H E++AR +
Sbjct: 168 VIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKTWYVVPPEHGQHLERLAR-E 226
Query: 264 VYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGF 323
++ DI S E AF + K + P +L +NG+ Q+ GEF++TFP YHAGF
Sbjct: 227 LFP-DI-SRGCE--AF--LRHKVALISPTVLKENGIPFNCMTQEAGEFMVTFPYGYHAGF 280
Query: 324 SNGFNCGEAVNFAIRDWFPFGEEAGK 349
++GFNC EA+NFA W +G+ A +
Sbjct: 281 NHGFNCAEAINFATPRWIDYGKMASQ 306
Score = 221 (82.9 bits), Expect = 3.2e-15, P = 3.2e-15
Identities = 71/228 (31%), Positives = 108/228 (47%)
Query: 38 YYPTLQEFDDPFIYLQKIAPE-ASQFGICKIISPVKASVSAADVLKKEIKGFEFGTYRQP 96
+YPT++EF D Y+ + + A Q G+ K+I P + A + +I+ T P
Sbjct: 18 FYPTMEEFADFNTYVAYMESQGAHQAGLAKVIPPKEWK---ARQMYDDIEDILIAT---P 71
Query: 97 LRLPKWNANDTGVFFS-GERKHTYDTFESEAIKMLKR-QSPRLGDLPPSYVEKKFWLEMT 154
L+ + + GVF ++K + + K+ Q+P + +E+++W +
Sbjct: 72 LQ--QVTSGQGGVFTQYHKKKKAMRVGQYRRLANSKKYQTPPHQNFAD--LEQRYW--KS 125
Query: 155 HGRKGTVEYGVNIEGSAFSSDPND-QLGKCKWHLKTLRGLPQSIFRFLEHIIPGITDPML 213
H + YG +I GS F LG HL T+ L + +I G+ P L
Sbjct: 126 HPGNPPI-YGADISGSLFEESTKQWNLG----HLGTILDLLEQECGV---VIEGVNTPYL 177
Query: 214 YIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVAR 261
Y GM + FAWH ED L+SINY H G PKTWY VP H E++AR
Sbjct: 178 YFGMWKTTFAWHTEDMDLYSINYLHFGEPKTWYVVPPEHGQHLERLAR 225
>UNIPROTKB|O94953 [details] [associations]
symbol:KDM4B "Lysine-specific demethylase 4B" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 EMBL:CH471139 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 eggNOG:COG5141 PROSITE:PS01359 SMART:SM00333
PROSITE:PS50304 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 KO:K06709 CTD:23030 EMBL:AB020683 EMBL:AC005595
EMBL:AC022517 EMBL:BC063889 EMBL:BC136611 EMBL:AL133622
IPI:IPI00013205 IPI:IPI00440491 PIR:T43460 RefSeq:NP_055830.1
UniGene:Hs.654816 ProteinModelPortal:O94953 SMR:O94953
DIP:DIP-47283N IntAct:O94953 MINT:MINT-1427202 STRING:O94953
PhosphoSite:O94953 PaxDb:O94953 PRIDE:O94953
Ensembl:ENST00000159111 Ensembl:ENST00000381759 GeneID:23030
KEGG:hsa:23030 UCSC:uc002mbq.4 UCSC:uc010xil.1
GeneCards:GC19P004969 HGNC:HGNC:29136 MIM:609765 neXtProt:NX_O94953
PharmGKB:PA164721452 InParanoid:O94953 OrthoDB:EOG4N5VW5
PhylomeDB:O94953 ChiTaRS:KDM4B GenomeRNAi:23030 NextBio:44006
ArrayExpress:O94953 Bgee:O94953 CleanEx:HS_JMJD2B
Genevestigator:O94953 Uniprot:O94953
Length = 1096
Score = 349 (127.9 bits), Expect = 1.7e-29, P = 1.7e-29
Identities = 81/214 (37%), Positives = 115/214 (53%)
Query: 134 SPRLGDLPPSYVEKKFWLEMTHGRKGTVEYGVNIEGSAFSSDPNDQLGKCKWHLKTLRGL 193
+PR D +E+K+W +T + YG +I GS + D +W++ +LR +
Sbjct: 109 TPRHQDFDD--LERKYWKNLTFV---SPIYGADISGSLYDDDV------AQWNIGSLRTI 157
Query: 194 PQSIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHA 253
+ R II G+ P LY GM + FAWH ED L+SINY H G PK+WY +P H
Sbjct: 158 LDMVERECGTIIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHG 217
Query: 254 LQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVI 313
+ E++A S+ G D AF + K T+ P IL G+ + Q+ GEF+I
Sbjct: 218 KRLERLAIGFFPG----SSQGCD-AF--LRHKMTLISPIILKKYGIPFSRITQEAGEFMI 270
Query: 314 TFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEA 347
TFP YHAGF++GFNC E+ NFA W +G+ A
Sbjct: 271 TFPYGYHAGFNHGFNCAESTNFATLRWIDYGKVA 304
Score = 216 (81.1 bits), Expect = 4.4e-13, Sum P(2) = 4.4e-13
Identities = 69/229 (30%), Positives = 109/229 (47%)
Query: 38 YYPTLQEFDDPFIYLQKIAPE-ASQFGICKIISPV--KASVSAADVLKKEIKGFEFGTYR 94
+ PT++EF D Y+ I + A + G+ KII P K + D+ I
Sbjct: 18 FRPTMEEFKDFNKYVAYIESQGAHRAGLAKIIPPKEWKPRQTYDDIDDVVI--------- 68
Query: 95 QPLRLPKWNANDTGVF--FSGERKH-TYDTFESEAIKMLKRQSPRLGDLPPSYVEKKFWL 151
P + + +G+F ++ ++K T + A K +PR D +E+K+W
Sbjct: 69 -PAPIQQVVTGQSGLFTQYNIQKKAMTVGEYRRLA-NSEKYCTPRHQDFDD--LERKYWK 124
Query: 152 EMTHGRKGTVEYGVNIEGSAFSSDPNDQLGKCKWHLKTLRGLPQSIFRFLEHIIPGITDP 211
+T + YG +I GS + D +W++ +LR + + R II G+ P
Sbjct: 125 NLTFV---SPIYGADISGSLYDDDV------AQWNIGSLRTILDMVERECGTIIEGVNTP 175
Query: 212 MLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVA 260
LY GM + FAWH ED L+SINY H G PK+WY +P H + E++A
Sbjct: 176 YLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLA 224
Score = 38 (18.4 bits), Expect = 4.4e-13, Sum P(2) = 4.4e-13
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 338 RDWFPFGEEAGKRYARL 354
+ W+ E GKR RL
Sbjct: 207 KSWYAIPPEHGKRLERL 223
>UNIPROTKB|F5GX28 [details] [associations]
symbol:KDM4B "Lysine-specific demethylase 4B" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 EMBL:AC005595
EMBL:AC022517 HGNC:HGNC:29136 ChiTaRS:KDM4B EMBL:AC053467
EMBL:AC093033 EMBL:AC104520 IPI:IPI00922876
ProteinModelPortal:F5GX28 SMR:F5GX28 Ensembl:ENST00000536461
UCSC:uc010xim.2 OMA:QTEKEAP ArrayExpress:F5GX28 Bgee:F5GX28
Uniprot:F5GX28
Length = 1130
Score = 349 (127.9 bits), Expect = 1.8e-29, P = 1.8e-29
Identities = 81/214 (37%), Positives = 115/214 (53%)
Query: 134 SPRLGDLPPSYVEKKFWLEMTHGRKGTVEYGVNIEGSAFSSDPNDQLGKCKWHLKTLRGL 193
+PR D +E+K+W +T + YG +I GS + D +W++ +LR +
Sbjct: 109 TPRHQDFDD--LERKYWKNLTFV---SPIYGADISGSLYDDDV------AQWNIGSLRTI 157
Query: 194 PQSIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHA 253
+ R II G+ P LY GM + FAWH ED L+SINY H G PK+WY +P H
Sbjct: 158 LDMVERECGTIIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHG 217
Query: 254 LQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVI 313
+ E++A S+ G D AF + K T+ P IL G+ + Q+ GEF+I
Sbjct: 218 KRLERLAIGFFPG----SSQGCD-AF--LRHKMTLISPIILKKYGIPFSRITQEAGEFMI 270
Query: 314 TFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEA 347
TFP YHAGF++GFNC E+ NFA W +G+ A
Sbjct: 271 TFPYGYHAGFNHGFNCAESTNFATLRWIDYGKVA 304
Score = 216 (81.1 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 69/229 (30%), Positives = 109/229 (47%)
Query: 38 YYPTLQEFDDPFIYLQKIAPE-ASQFGICKIISPV--KASVSAADVLKKEIKGFEFGTYR 94
+ PT++EF D Y+ I + A + G+ KII P K + D+ I
Sbjct: 18 FRPTMEEFKDFNKYVAYIESQGAHRAGLAKIIPPKEWKPRQTYDDIDDVVI--------- 68
Query: 95 QPLRLPKWNANDTGVF--FSGERKH-TYDTFESEAIKMLKRQSPRLGDLPPSYVEKKFWL 151
P + + +G+F ++ ++K T + A K +PR D +E+K+W
Sbjct: 69 -PAPIQQVVTGQSGLFTQYNIQKKAMTVGEYRRLA-NSEKYCTPRHQDFDD--LERKYWK 124
Query: 152 EMTHGRKGTVEYGVNIEGSAFSSDPNDQLGKCKWHLKTLRGLPQSIFRFLEHIIPGITDP 211
+T + YG +I GS + D +W++ +LR + + R II G+ P
Sbjct: 125 NLTFV---SPIYGADISGSLYDDDV------AQWNIGSLRTILDMVERECGTIIEGVNTP 175
Query: 212 MLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVA 260
LY GM + FAWH ED L+SINY H G PK+WY +P H + E++A
Sbjct: 176 YLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLA 224
Score = 38 (18.4 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 338 RDWFPFGEEAGKRYARL 354
+ W+ E GKR RL
Sbjct: 207 KSWYAIPPEHGKRLERL 223
>UNIPROTKB|E2R243 [details] [associations]
symbol:KDM4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR007527 Pfam:PF02373 PROSITE:PS50966
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 OMA:QTEKEAP EMBL:AAEX03012537
EMBL:AAEX03012538 EMBL:AAEX03012539 Ensembl:ENSCAFT00000030040
Uniprot:E2R243
Length = 1133
Score = 349 (127.9 bits), Expect = 1.8e-29, P = 1.8e-29
Identities = 81/214 (37%), Positives = 115/214 (53%)
Query: 134 SPRLGDLPPSYVEKKFWLEMTHGRKGTVEYGVNIEGSAFSSDPNDQLGKCKWHLKTLRGL 193
+PR D +E+K+W +T + YG +I GS + D +W++ +LR +
Sbjct: 109 TPRHQDFDD--LERKYWKNLTFV---SPIYGADISGSLYDDDV------AQWNIGSLRTI 157
Query: 194 PQSIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHA 253
+ R II G+ P LY GM + FAWH ED L+SINY H G PK+WY +P H
Sbjct: 158 LDMVERECGTIIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHG 217
Query: 254 LQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVI 313
+ E++A S+ G D AF + K T+ P IL G+ + Q+ GEF+I
Sbjct: 218 KRLERLAIGFFPG----SSQGCD-AF--LRHKMTLISPIILKKYGIPFSRITQEAGEFMI 270
Query: 314 TFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEA 347
TFP YHAGF++GFNC E+ NFA W +G+ A
Sbjct: 271 TFPYGYHAGFNHGFNCAESTNFATLRWIDYGKVA 304
Score = 216 (81.1 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 69/229 (30%), Positives = 109/229 (47%)
Query: 38 YYPTLQEFDDPFIYLQKIAPE-ASQFGICKIISPV--KASVSAADVLKKEIKGFEFGTYR 94
+ PT++EF D Y+ I + A + G+ KII P K + D+ I
Sbjct: 18 FRPTMEEFKDFNKYVAYIESQGAHRAGLAKIIPPKEWKPRQTYDDIDDVVI--------- 68
Query: 95 QPLRLPKWNANDTGVF--FSGERKH-TYDTFESEAIKMLKRQSPRLGDLPPSYVEKKFWL 151
P + + +G+F ++ ++K T + A K +PR D +E+K+W
Sbjct: 69 -PAPIQQVVTGQSGLFTQYNIQKKAMTVGEYRRLA-NSEKYCTPRHQDFDD--LERKYWK 124
Query: 152 EMTHGRKGTVEYGVNIEGSAFSSDPNDQLGKCKWHLKTLRGLPQSIFRFLEHIIPGITDP 211
+T + YG +I GS + D +W++ +LR + + R II G+ P
Sbjct: 125 NLTFV---SPIYGADISGSLYDDDV------AQWNIGSLRTILDMVERECGTIIEGVNTP 175
Query: 212 MLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVA 260
LY GM + FAWH ED L+SINY H G PK+WY +P H + E++A
Sbjct: 176 YLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLA 224
Score = 38 (18.4 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 338 RDWFPFGEEAGKRYARL 354
+ W+ E GKR RL
Sbjct: 207 KSWYAIPPEHGKRLERL 223
>MGI|MGI:2442355 [details] [associations]
symbol:Kdm4b "lysine (K)-specific demethylase 4B"
species:10090 "Mus musculus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS50016 PROSITE:PS51184
SMART:SM00249 SMART:SM00558 InterPro:IPR002999 MGI:MGI:2442355
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR013083 eggNOG:COG5141 PROSITE:PS01359 SMART:SM00333
PROSITE:PS50304 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063342 HOGENOM:HOG000231125
KO:K06709 CTD:23030 OrthoDB:EOG4N5VW5 ChiTaRS:KDM4B EMBL:AK129233
EMBL:AK141879 EMBL:BC005480 EMBL:BC007145 IPI:IPI00127444
IPI:IPI00460708 RefSeq:NP_742144.1 UniGene:Mm.45047
ProteinModelPortal:Q91VY5 SMR:Q91VY5 STRING:Q91VY5
PhosphoSite:Q91VY5 PRIDE:Q91VY5 Ensembl:ENSMUST00000025036
GeneID:193796 KEGG:mmu:193796 UCSC:uc008dbu.2 InParanoid:Q91VY5
OMA:QRTRPLI NextBio:371516 Bgee:Q91VY5 CleanEx:MM_JMJD2B
Genevestigator:Q91VY5 GermOnline:ENSMUSG00000024201 Uniprot:Q91VY5
Length = 1086
Score = 348 (127.6 bits), Expect = 2.5e-29, P = 2.5e-29
Identities = 81/214 (37%), Positives = 114/214 (53%)
Query: 134 SPRLGDLPPSYVEKKFWLEMTHGRKGTVEYGVNIEGSAFSSDPNDQLGKCKWHLKTLRGL 193
+PR D +E+K+W +T + YG +I GS + D +W++ LR +
Sbjct: 109 TPRHQDFDD--LERKYWKNLTFV---SPIYGADISGSLYDDDV------AQWNIGNLRTI 157
Query: 194 PQSIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHA 253
+ R II G+ P LY GM + FAWH ED L+SINY H G PK+WY +P H
Sbjct: 158 LDMVERECGTIIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHG 217
Query: 254 LQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVI 313
+ E++A S+ G D AF + K T+ P IL G+ + Q+ GEF+I
Sbjct: 218 KRLERLAIGFFPG----SSQGCD-AF--LRHKMTLISPIILKKYGIPFSRITQEAGEFMI 270
Query: 314 TFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEA 347
TFP YHAGF++GFNC E+ NFA W +G+ A
Sbjct: 271 TFPYGYHAGFNHGFNCAESTNFATLRWIDYGKVA 304
>UNIPROTKB|E1BX38 [details] [associations]
symbol:Gga.52669 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 SMART:SM00333
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 OMA:QTEKEAP EMBL:AADN02062013
IPI:IPI00735114 Ensembl:ENSGALT00000006511 ArrayExpress:E1BX38
Uniprot:E1BX38
Length = 1095
Score = 348 (127.6 bits), Expect = 2.6e-29, P = 2.6e-29
Identities = 80/214 (37%), Positives = 114/214 (53%)
Query: 134 SPRLGDLPPSYVEKKFWLEMTHGRKGTVEYGVNIEGSAFSSDPNDQLGKCKWHLKTLRGL 193
+PR D +E+K+W +T + YG +I GS + +D + W++ L L
Sbjct: 109 TPRHQDFED--LERKYWKNLTFV---SPIYGADISGSLYDTDVEE------WNIGNLNTL 157
Query: 194 PQSIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHA 253
+ II G+ P LY GM + FAWH ED L+SINY H G PK+WY +P H
Sbjct: 158 LDMVEHECGIIIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHG 217
Query: 254 LQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVI 313
+ E++A+ S+ G D AF + K T+ P IL G+ + Q+ GEF+I
Sbjct: 218 KRLERLAKGFFPG----SSQGCD-AF--LRHKMTLISPSILKKYGIPFDRITQEAGEFMI 270
Query: 314 TFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEA 347
TFP YHAGF++GFNC E+ NFA W +G+ A
Sbjct: 271 TFPYGYHAGFNHGFNCAESTNFATLRWIDYGKMA 304
>UNIPROTKB|E1BA41 [details] [associations]
symbol:KDM4B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR007527 Pfam:PF02373 PROSITE:PS50966 PROSITE:PS51184
SMART:SM00249 SMART:SM00558 InterPro:IPR002999 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
SMART:SM00333 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063342 KO:K06709 CTD:23030
OMA:QTEKEAP EMBL:DAAA02019590 EMBL:DAAA02019591 EMBL:DAAA02019592
IPI:IPI00689692 RefSeq:XP_002688966.2 RefSeq:XP_584880.4
Ensembl:ENSBTAT00000020586 GeneID:508141 KEGG:bta:508141
Uniprot:E1BA41
Length = 1116
Score = 348 (127.6 bits), Expect = 2.6e-29, P = 2.6e-29
Identities = 81/214 (37%), Positives = 114/214 (53%)
Query: 134 SPRLGDLPPSYVEKKFWLEMTHGRKGTVEYGVNIEGSAFSSDPNDQLGKCKWHLKTLRGL 193
+PR D +E+K+W +T + YG +I GS + D +W++ LR +
Sbjct: 109 TPRHQDFDD--LERKYWKNLTFV---SPIYGADISGSLYDDDV------AQWNIGNLRTI 157
Query: 194 PQSIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHA 253
+ R II G+ P LY GM + FAWH ED L+SINY H G PK+WY +P H
Sbjct: 158 LDMVERECGTIIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHG 217
Query: 254 LQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVI 313
+ E++A S+ G D AF + K T+ P IL G+ + Q+ GEF+I
Sbjct: 218 KRLERLAIGFFPG----SSQGCD-AF--LRHKMTLISPIILKKYGIPFSRITQEAGEFMI 270
Query: 314 TFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEA 347
TFP YHAGF++GFNC E+ NFA W +G+ A
Sbjct: 271 TFPYGYHAGFNHGFNCAESTNFATLRWIDYGKVA 304
Score = 215 (80.7 bits), Expect = 6.0e-13, Sum P(2) = 6.0e-13
Identities = 69/229 (30%), Positives = 108/229 (47%)
Query: 38 YYPTLQEFDDPFIYLQKIAPE-ASQFGICKIISPV--KASVSAADVLKKEIKGFEFGTYR 94
+ PT++EF D Y+ I + A + G+ KII P K + D+ I
Sbjct: 18 FRPTMEEFKDFNKYVAYIESQGAHRAGLAKIIPPKEWKPRQTYDDIDDVVI--------- 68
Query: 95 QPLRLPKWNANDTGVF--FSGERKH-TYDTFESEAIKMLKRQSPRLGDLPPSYVEKKFWL 151
P + + +G+F ++ ++K T + A K +PR D +E+K+W
Sbjct: 69 -PAPIQQVVTGQSGLFTQYNIQKKAMTVGEYRRLA-NSEKYCTPRHQDFDD--LERKYWK 124
Query: 152 EMTHGRKGTVEYGVNIEGSAFSSDPNDQLGKCKWHLKTLRGLPQSIFRFLEHIIPGITDP 211
+T + YG +I GS + D +W++ LR + + R II G+ P
Sbjct: 125 NLTFV---SPIYGADISGSLYDDDV------AQWNIGNLRTILDMVERECGTIIEGVNTP 175
Query: 212 MLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVA 260
LY GM + FAWH ED L+SINY H G PK+WY +P H + E++A
Sbjct: 176 YLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLA 224
Score = 38 (18.4 bits), Expect = 6.0e-13, Sum P(2) = 6.0e-13
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 338 RDWFPFGEEAGKRYARL 354
+ W+ E GKR RL
Sbjct: 207 KSWYAIPPEHGKRLERL 223
>ZFIN|ZDB-GENE-120215-3 [details] [associations]
symbol:si:ch211-215f22.3 "si:ch211-215f22.3"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 ZFIN:ZDB-GENE-120215-3
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 EMBL:BX119315 RefSeq:XP_001921829.2
Ensembl:ENSDART00000151359 GeneID:100003413 KEGG:dre:100003413
Bgee:I3ITH4 Uniprot:I3ITH4
Length = 2012
Score = 349 (127.9 bits), Expect = 4.2e-29, P = 4.2e-29
Identities = 80/217 (36%), Positives = 115/217 (52%)
Query: 131 KRQSPRLGDLPPSYVEKKFWLEMTHGRKGTVEYGVNIEGSAFSSDPNDQLGKCKWHLKTL 190
K +PR D +E+KFW +T YG ++ G+ + DP D + +W++ L
Sbjct: 108 KFSNPRYADFEE--LERKFWKNLTFNPP---LYGADVSGTLY--DP-DVM---EWNIGRL 156
Query: 191 RGLPQSIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPG 250
+ + R I G+ P LY GM S FAWH ED L+SINY H G PK+WY VP
Sbjct: 157 NTILDMVERESGITIKGVNTPYLYFGMWKSTFAWHTEDMDLYSINYLHFGEPKSWYVVPP 216
Query: 251 HHALQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGE 310
H + E++A+ +A AF + K T+ P IL G+ K Q+ G+
Sbjct: 217 EHGKRLERLAKGF-----FPGSAQSCEAF--LRHKMTLISPSILRKYGIPFEKVTQEAGQ 269
Query: 311 FVITFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEA 347
F++TFP YHAGF++GFNC E+ NFA + W +G+ A
Sbjct: 270 FIVTFPYGYHAGFNHGFNCAESTNFATQRWIDYGKLA 306
Score = 211 (79.3 bits), Expect = 5.4e-12, Sum P(2) = 5.4e-12
Identities = 67/228 (29%), Positives = 109/228 (47%)
Query: 38 YYPTLQEFDDPFIYLQKIAPE-ASQFGICKIISPVKASVSAADVLKKEIKGFEFGTYRQP 96
++PT +EF D Y+ + + A + G+ K++ P +I+ T P
Sbjct: 20 FHPTKEEFKDFNRYIAYMESQGAHRAGMAKVVPPKDWKPRRT---YDDIEDLVIPT---P 73
Query: 97 LRLPKWNANDTGVF--FSGERKH-TYDTFESEAIKMLKRQSPRLGDLPPSYVEKKFWLEM 153
++ + +G+F ++ ++K T F A K +PR D +E+KFW +
Sbjct: 74 IQ--QVVTGQSGLFTQYNIQKKPMTVREFRKTA-NTDKFSNPRYADFEE--LERKFWKNL 128
Query: 154 THGRKGTVEYGVNIEGSAFSSDPNDQLGKCKWHLKTLRGLPQSIFRFLEHIIPGITDPML 213
T YG ++ G+ + DP D + +W++ L + + R I G+ P L
Sbjct: 129 TFNPP---LYGADVSGTLY--DP-DVM---EWNIGRLNTILDMVERESGITIKGVNTPYL 179
Query: 214 YIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVAR 261
Y GM S FAWH ED L+SINY H G PK+WY VP H + E++A+
Sbjct: 180 YFGMWKSTFAWHTEDMDLYSINYLHFGEPKSWYVVPPEHGKRLERLAK 227
Score = 39 (18.8 bits), Expect = 5.4e-12, Sum P(2) = 5.4e-12
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 338 RDWFPFGEEAGKRYARLHK 356
+ W+ E GKR RL K
Sbjct: 209 KSWYVVPPEHGKRLERLAK 227
>SGD|S000000971 [details] [associations]
symbol:RPH1 "JmjC domain-containing histone demethylase"
species:4932 "Saccharomyces cerevisiae" [GO:0001078 "RNA polymerase
II core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in negative regulation of
transcription" evidence=IMP;IDA] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IC] [GO:0043565
"sequence-specific DNA binding" evidence=IMP;IDA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0051864 "histone demethylase activity
(H3-K36 specific)" evidence=IMP;IDA] [GO:0032454 "histone
demethylase activity (H3-K9 specific)" evidence=IDA] [GO:0016577
"histone demethylation" evidence=IMP;IDA] Pfam:PF00096
InterPro:IPR003347 InterPro:IPR007087 InterPro:IPR013087
InterPro:IPR015880 Pfam:PF02373 PROSITE:PS00028 PROSITE:PS50157
PROSITE:PS51184 SMART:SM00355 SMART:SM00558 SGD:S000000971
GO:GO:0005634 GO:GO:0046872 GO:GO:0001078 GO:GO:0043565
GO:GO:0008270 EMBL:BK006939 eggNOG:COG5048 Gene3D:3.30.160.60
EMBL:U18922 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063342 HOGENOM:HOG000112726
OrthoDB:EOG4NGKW6 GO:GO:0051864 GO:GO:0032454 PIR:S50672
RefSeq:NP_011096.1 PDB:3OPT PDB:3OPW PDBsum:3OPT PDBsum:3OPW
ProteinModelPortal:P39956 SMR:P39956 DIP:DIP-5418N IntAct:P39956
MINT:MINT-518485 STRING:P39956 PaxDb:P39956 PeptideAtlas:P39956
EnsemblFungi:YER169W GeneID:856916 KEGG:sce:YER169W CYGD:YER169w
OMA:EFLRHKM EvolutionaryTrace:P39956 NextBio:983368
Genevestigator:P39956 GermOnline:YER169W Uniprot:P39956
Length = 796
Score = 323 (118.8 bits), Expect = 6.2e-29, Sum P(2) = 6.2e-29
Identities = 63/157 (40%), Positives = 93/157 (59%)
Query: 193 LPQSIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHH 252
LP +I +E +PG+ D LY G+ + F+WH+ED L+SINY H GAPK WY +P
Sbjct: 204 LP-NILDHMETKVPGVNDSYLYAGLWKASFSWHLEDQDLYSINYIHFGAPKQWYSIPQED 262
Query: 253 ALQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFV 312
+F K + Q + + + E + K + PK+L +NG+ + V GEF+
Sbjct: 263 RFKFYKFMQEQ-FPEEAKNCP------EFLRHKMFLASPKLLQENGIRCNEIVHHEGEFM 315
Query: 313 ITFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGK 349
IT+P YHAGF+ G+N E+VNFA+ +W P G++AGK
Sbjct: 316 ITYPYGYHAGFNYGYNLAESVNFALEEWLPIGKKAGK 352
Score = 65 (27.9 bits), Expect = 6.2e-29, Sum P(2) = 6.2e-29
Identities = 11/39 (28%), Positives = 21/39 (53%)
Query: 32 ISDCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISP 70
+ P + PT ++F+D + Y + I + G+ K+I P
Sbjct: 11 VGGVPVFKPTYEQFEDFYAYCKAINKYGMKSGVVKVIPP 49
>UNIPROTKB|F1PHR7 [details] [associations]
symbol:KDM4C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050681 "androgen receptor binding"
evidence=IEA] [GO:0032454 "histone demethylase activity (H3-K9
specific)" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0046872 GO:GO:0008284 GO:GO:0008270 GO:GO:0006357
GO:GO:0000790 SMART:SM00333 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 GeneTree:ENSGT00530000063342 GO:GO:0032454 OMA:DIIQGER
EMBL:AAEX03007833 EMBL:AAEX03007834 EMBL:AAEX03007835
Ensembl:ENSCAFT00000002249 Uniprot:F1PHR7
Length = 1053
Score = 341 (125.1 bits), Expect = 2.2e-28, P = 2.2e-28
Identities = 76/203 (37%), Positives = 110/203 (54%)
Query: 145 VEKKFWLEMTHGRKGTVEYGVNIEGSAFSSDPNDQLGKCKWHLKTLRGLPQSIFRFLEHI 204
+E+K+W +T + YG +I GS + D ++ W++ L + +
Sbjct: 119 LERKYWKNLTF--VAPI-YGADINGSIYDEDVDE------WNIARLNTVLDVVEEECGIS 169
Query: 205 IPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQV 264
I G+ P LY GM + FAWH ED L+SINY H G PK+WY +P H + E++A+
Sbjct: 170 IEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAQGFF 229
Query: 265 YSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFS 324
S S+ G D AF + K T+ P +L G+ K Q+ GEF+ITFP YHAGF+
Sbjct: 230 PS----SSQGCD-AF--LRHKMTLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFN 282
Query: 325 NGFNCGEAVNFAIRDWFPFGEEA 347
+GFNC E+ NFA W +G+ A
Sbjct: 283 HGFNCAESTNFATVRWIDYGKVA 305
>FB|FBgn0053182 [details] [associations]
symbol:Kdm4B "Histone demethylase 4B" species:7227
"Drosophila melanogaster" [GO:0016577 "histone demethylation"
evidence=ISS] [GO:0051864 "histone demethylase activity (H3-K36
specific)" evidence=ISS;IDA;IMP] [GO:0005634 "nucleus"
evidence=ISS] [GO:0070544 "histone H3-K36 demethylation"
evidence=IMP] [GO:0033169 "histone H3-K9 demethylation"
evidence=IDA;IMP] [GO:0032454 "histone demethylase activity (H3-K9
specific)" evidence=IDA;IMP] InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00558 EMBL:AE013599 GO:GO:0005634
GO:GO:0045892 GO:GO:0046872 GO:GO:0006351 GO:GO:0016702
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 eggNOG:NOG317950
GO:GO:0032454 KO:K06709 RefSeq:NP_001163137.1 RefSeq:NP_001163138.1
RefSeq:NP_001163139.1 RefSeq:NP_788344.2 UniGene:Dm.6975
ProteinModelPortal:Q9V6L0 SMR:Q9V6L0 PaxDb:Q9V6L0
EnsemblMetazoa:FBtr0087770 EnsemblMetazoa:FBtr0302052
EnsemblMetazoa:FBtr0302053 EnsemblMetazoa:FBtr0302054 GeneID:318918
KEGG:dme:Dmel_CG33182 UCSC:CG33182-RA CTD:23030 FlyBase:FBgn0053182
InParanoid:Q9V6L0 OMA:MERWIEY OrthoDB:EOG4NVX19 PhylomeDB:Q9V6L0
GenomeRNAi:318918 NextBio:846567 GermOnline:CG33182 Uniprot:Q9V6L0
Length = 590
Score = 336 (123.3 bits), Expect = 2.2e-28, P = 2.2e-28
Identities = 76/203 (37%), Positives = 110/203 (54%)
Query: 145 VEKKFWLEMTHGRKGTVEYGVNIEGSAFSSDPNDQLGKCKWHLKTLRGLPQSIFRFLEHI 204
+E+K+W +T+ + YG ++ GS +D + W++ L + + +
Sbjct: 115 LERKYWKNITY--VAPI-YGADVSGSITDTDQDS------WNINRLGTILDYVNKDYNIQ 165
Query: 205 IPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQV 264
I G+ LY GM + FAWH ED L+SINY H GAPKTWY VP + EKVA NQ
Sbjct: 166 IDGVNTAYLYFGMWKTTFAWHTEDMDLYSINYLHFGAPKTWYVVPPECGRKLEKVA-NQY 224
Query: 265 YSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFS 324
+ + A+ + K T+ P+IL + V V K Q+ GE +ITFP YHAGF+
Sbjct: 225 FPASYKNC----NAY--LRHKMTLISPQILKQHDVPVSKITQEAGEIMITFPFGYHAGFN 278
Query: 325 NGFNCGEAVNFAIRDWFPFGEEA 347
+GFNC E+ NFA+ W +G+ A
Sbjct: 279 HGFNCAESTNFAMERWIEYGKRA 301
>ZFIN|ZDB-GENE-030131-6279 [details] [associations]
symbol:kdm4ab "lysine (K)-specific demethylase 4A,
genome duplicate b" species:7955 "Danio rerio" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00249 SMART:SM00558 ZFIN:ZDB-GENE-030131-6279 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 eggNOG:COG5141
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
HOGENOM:HOG000231125 OrthoDB:EOG4QRH37 HOVERGEN:HBG080483
IPI:IPI00489014 EMBL:BC047193 UniGene:Dr.24248
ProteinModelPortal:Q802U7 STRING:Q802U7 ArrayExpress:Q802U7
Uniprot:Q802U7
Length = 895
Score = 338 (124.0 bits), Expect = 3.3e-28, Sum P(2) = 3.3e-28
Identities = 73/204 (35%), Positives = 112/204 (54%)
Query: 145 VEKKFWLEMTHGRKGTVEYGVNIEGSAFSSDPNDQLGKCKWHLKTLRGLPQSIFRFLEHI 204
+E+K+W +T YG ++ G+ + DP+ + +W++ L + ++
Sbjct: 114 LERKYWKNVTFNPP---IYGADVNGTLY--DPDIK----EWNVGHLNTILDTVEHESGIT 164
Query: 205 IPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQV 264
I G+ P LY GM + FAWH ED L+SINY H G PK+WY VP H + E++A+
Sbjct: 165 IEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYTVPPEHGKRLERLAKG-- 222
Query: 265 YSRDILSAAGED-GAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGF 323
+ ++ AF + K T+ P IL G+ K Q+ GEF++TFP YHAGF
Sbjct: 223 ----FFPGSSQNCEAF--LRHKMTLISPSILKKYGIPFEKITQEAGEFMVTFPYGYHAGF 276
Query: 324 SNGFNCGEAVNFAIRDWFPFGEEA 347
++GFNC E+ NFA R W +G++A
Sbjct: 277 NHGFNCAESTNFATRRWIDYGKQA 300
Score = 40 (19.1 bits), Expect = 3.3e-28, Sum P(2) = 3.3e-28
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 403 LKMPFDYLQNSQGSFVCDLCKRDCYLAFTECKSCQRYTCLFHE 445
L P + L ++ + + K+ +TE C+ YT L HE
Sbjct: 388 LDFPEEVLPKTETNDEAEYGKKGRLTPYTE--QCKEYTELKHE 428
>ZFIN|ZDB-GENE-070705-160 [details] [associations]
symbol:si:ch211-262l3.1 "si:ch211-262l3.1"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 ZFIN:ZDB-GENE-070705-160 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 EMBL:BX640408 EMBL:CABZ01059930
EMBL:CABZ01059931 IPI:IPI00489014 Ensembl:ENSDART00000024302
OMA:VKEWNIC ArrayExpress:F1QNG0 Bgee:F1QNG0 Uniprot:F1QNG0
Length = 895
Score = 338 (124.0 bits), Expect = 3.3e-28, Sum P(2) = 3.3e-28
Identities = 73/204 (35%), Positives = 112/204 (54%)
Query: 145 VEKKFWLEMTHGRKGTVEYGVNIEGSAFSSDPNDQLGKCKWHLKTLRGLPQSIFRFLEHI 204
+E+K+W +T YG ++ G+ + DP+ + +W++ L + ++
Sbjct: 114 LERKYWKNVTFNPP---IYGADVNGTLY--DPDIK----EWNVGHLNTILDTVEHESGIT 164
Query: 205 IPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQV 264
I G+ P LY GM + FAWH ED L+SINY H G PK+WY VP H + E++A+
Sbjct: 165 IEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYTVPPEHGKRLERLAKG-- 222
Query: 265 YSRDILSAAGED-GAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGF 323
+ ++ AF + K T+ P IL G+ K Q+ GEF++TFP YHAGF
Sbjct: 223 ----FFPGSSQNCEAF--LRHKMTLISPSILKKYGIPFEKITQEAGEFMVTFPYGYHAGF 276
Query: 324 SNGFNCGEAVNFAIRDWFPFGEEA 347
++GFNC E+ NFA R W +G++A
Sbjct: 277 NHGFNCAESTNFATRRWIDYGKQA 300
Score = 40 (19.1 bits), Expect = 3.3e-28, Sum P(2) = 3.3e-28
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 403 LKMPFDYLQNSQGSFVCDLCKRDCYLAFTECKSCQRYTCLFHE 445
L P + L ++ + + K+ +TE C+ YT L HE
Sbjct: 388 LDFPEEVLPKTETNDEAEYGKKGRLTPYTE--QCKEYTELKHE 428
>UNIPROTKB|O75164 [details] [associations]
symbol:KDM4A "Lysine-specific demethylase 4A" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0051864 "histone demethylase activity (H3-K36 specific)"
evidence=IDA] [GO:0016577 "histone demethylation" evidence=IDA]
[GO:0035064 "methylated histone residue binding" evidence=IDA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070544 "histone
H3-K36 demethylation" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] InterPro:IPR001965 InterPro:IPR003347
Pfam:PF02373 PROSITE:PS50016 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 GO:GO:0005737 GO:GO:0005813
GO:GO:0045892 GO:GO:0019048 GO:GO:0005730 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
eggNOG:COG5141 PROSITE:PS01359 SMART:SM00333 PROSITE:PS50304
GO:GO:0035064 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GO:GO:0051864 PDB:2YBP PDB:2YBS PDBsum:2YBP
PDBsum:2YBS PDB:3U4S PDBsum:3U4S CTD:9682 EMBL:AB014577
EMBL:AL451062 EMBL:AC092815 EMBL:BC002558 IPI:IPI00005666
RefSeq:NP_055478.2 UniGene:Hs.155983 PDB:2GF7 PDB:2GFA PDB:2GP3
PDB:2GP5 PDB:2OQ6 PDB:2OQ7 PDB:2OS2 PDB:2OT7 PDB:2OX0 PDB:2P5B
PDB:2PXJ PDB:2Q8C PDB:2Q8D PDB:2Q8E PDB:2QQR PDB:2QQS PDB:2VD7
PDB:2WWJ PDB:2YBK PDB:3NJY PDB:3PDQ PDB:3RVH PDB:4AI9 PDB:4GD4
PDBsum:2GF7 PDBsum:2GFA PDBsum:2GP3 PDBsum:2GP5 PDBsum:2OQ6
PDBsum:2OQ7 PDBsum:2OS2 PDBsum:2OT7 PDBsum:2OX0 PDBsum:2P5B
PDBsum:2PXJ PDBsum:2Q8C PDBsum:2Q8D PDBsum:2Q8E PDBsum:2QQR
PDBsum:2QQS PDBsum:2VD7 PDBsum:2WWJ PDBsum:2YBK PDBsum:3NJY
PDBsum:3PDQ PDBsum:3RVH PDBsum:4AI9 PDBsum:4GD4
ProteinModelPortal:O75164 SMR:O75164 DIP:DIP-29372N IntAct:O75164
MINT:MINT-2829088 STRING:O75164 PhosphoSite:O75164 PRIDE:O75164
Ensembl:ENST00000372396 GeneID:9682 KEGG:hsa:9682 UCSC:uc001cjx.3
GeneCards:GC01P044115 H-InvDB:HIX0020610 HGNC:HGNC:22978
HPA:HPA007610 MIM:609764 neXtProt:NX_O75164 PharmGKB:PA164721403
HOGENOM:HOG000231125 InParanoid:O75164 KO:K06709 OMA:KRTAGCC
OrthoDB:EOG4QRH37 PhylomeDB:O75164 BindingDB:O75164
ChEMBL:CHEMBL5896 ChiTaRS:Kdm4A EvolutionaryTrace:O75164
GenomeRNAi:9682 NextBio:36361 ArrayExpress:O75164 Bgee:O75164
CleanEx:HS_JMJD2A Genevestigator:O75164 GermOnline:ENSG00000066135
Uniprot:O75164
Length = 1064
Score = 339 (124.4 bits), Expect = 4.1e-28, P = 4.1e-28
Identities = 73/203 (35%), Positives = 109/203 (53%)
Query: 145 VEKKFWLEMTHGRKGTVEYGVNIEGSAFSSDPNDQLGKCKWHLKTLRGLPQSIFRFLEHI 204
+E+K+W +T YG ++ G+ + ++ W++ LR + + +
Sbjct: 117 LERKYWKNLTFNPP---IYGADVNGTLYEKHVDE------WNIGRLRTILDLVEKESGIT 167
Query: 205 IPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQV 264
I G+ P LY GM + FAWH ED L+SINY H G PK+WY VP H + E++A+
Sbjct: 168 IEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAKGF- 226
Query: 265 YSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFS 324
+A AF + K T+ P +L G+ K Q+ GEF+ITFP YHAGF+
Sbjct: 227 ----FPGSAQSCEAF--LRHKMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFN 280
Query: 325 NGFNCGEAVNFAIRDWFPFGEEA 347
+GFNC E+ NFA R W +G++A
Sbjct: 281 HGFNCAESTNFATRRWIEYGKQA 303
Score = 209 (78.6 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 62/228 (27%), Positives = 108/228 (47%)
Query: 38 YYPTLQEFDDPFIYLQKIAPE-ASQFGICKIISPVKASVSAADVLKKEIKGFEFGTYRQP 96
+YPT++EF + Y+ I + A + G+ K++ P + A+ +I P
Sbjct: 17 FYPTMEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKPRAS---YDDIDDLVI-----P 68
Query: 97 LRLPKWNANDTGVF--FSGERKH-TYDTFESEAIKMLKRQSPRLGDLPPSYVEKKFWLEM 153
+ + +G+F ++ ++K T F A K +PR + +E+K+W +
Sbjct: 69 APIQQLVTGQSGLFTQYNIQKKAMTVREFRKIA-NSDKYCTPRYSEFEE--LERKYWKNL 125
Query: 154 THGRKGTVEYGVNIEGSAFSSDPNDQLGKCKWHLKTLRGLPQSIFRFLEHIIPGITDPML 213
T YG ++ G+ + ++ W++ LR + + + I G+ P L
Sbjct: 126 TFNPP---IYGADVNGTLYEKHVDE------WNIGRLRTILDLVEKESGITIEGVNTPYL 176
Query: 214 YIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVAR 261
Y GM + FAWH ED L+SINY H G PK+WY VP H + E++A+
Sbjct: 177 YFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAK 224
Score = 40 (19.1 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 338 RDWFPFGEEAGKRYARLHK 356
+ W+ E GKR RL K
Sbjct: 206 KSWYSVPPEHGKRLERLAK 224
>UNIPROTKB|Q5RD88 [details] [associations]
symbol:KDM4A "Lysine-specific demethylase 4A" species:9601
"Pongo abelii" [GO:0035064 "methylated histone residue binding"
evidence=ISS] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS50016 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
InterPro:IPR002999 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0016568 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 SMART:SM00333 PROSITE:PS50304
GO:GO:0035064 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 CTD:9682 KO:K06709 EMBL:CR858028
RefSeq:NP_001125120.1 UniGene:Pab.1791 ProteinModelPortal:Q5RD88
SMR:Q5RD88 GeneID:100172003 KEGG:pon:100172003 InParanoid:Q5RD88
Uniprot:Q5RD88
Length = 1064
Score = 339 (124.4 bits), Expect = 4.1e-28, P = 4.1e-28
Identities = 73/203 (35%), Positives = 109/203 (53%)
Query: 145 VEKKFWLEMTHGRKGTVEYGVNIEGSAFSSDPNDQLGKCKWHLKTLRGLPQSIFRFLEHI 204
+E+K+W +T YG ++ G+ + ++ W++ LR + + +
Sbjct: 117 LERKYWKNLTFNPP---IYGADVNGTLYEKHVDE------WNIGRLRTILDLVEKESGIT 167
Query: 205 IPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQV 264
I G+ P LY GM + FAWH ED L+SINY H G PK+WY VP H + E++A+
Sbjct: 168 IEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAKGF- 226
Query: 265 YSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFS 324
+A AF + K T+ P +L G+ K Q+ GEF+ITFP YHAGF+
Sbjct: 227 ----FPGSAQSCEAF--LRHKMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFN 280
Query: 325 NGFNCGEAVNFAIRDWFPFGEEA 347
+GFNC E+ NFA R W +G++A
Sbjct: 281 HGFNCAESTNFATRRWIEYGKQA 303
Score = 209 (78.6 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 62/228 (27%), Positives = 108/228 (47%)
Query: 38 YYPTLQEFDDPFIYLQKIAPE-ASQFGICKIISPVKASVSAADVLKKEIKGFEFGTYRQP 96
+YPT++EF + Y+ I + A + G+ K++ P + A+ +I P
Sbjct: 17 FYPTMEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKPRAS---YDDIDDLVI-----P 68
Query: 97 LRLPKWNANDTGVF--FSGERKH-TYDTFESEAIKMLKRQSPRLGDLPPSYVEKKFWLEM 153
+ + +G+F ++ ++K T F A K +PR + +E+K+W +
Sbjct: 69 APIQQLVTGQSGLFTQYNIQKKAMTVREFRKIA-NSDKYCTPRYSEFEE--LERKYWKNL 125
Query: 154 THGRKGTVEYGVNIEGSAFSSDPNDQLGKCKWHLKTLRGLPQSIFRFLEHIIPGITDPML 213
T YG ++ G+ + ++ W++ LR + + + I G+ P L
Sbjct: 126 TFNPP---IYGADVNGTLYEKHVDE------WNIGRLRTILDLVEKESGITIEGVNTPYL 176
Query: 214 YIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVAR 261
Y GM + FAWH ED L+SINY H G PK+WY VP H + E++A+
Sbjct: 177 YFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAK 224
Score = 40 (19.1 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 338 RDWFPFGEEAGKRYARLHK 356
+ W+ E GKR RL K
Sbjct: 206 KSWYSVPPEHGKRLERLAK 224
>UNIPROTKB|E1BPL5 [details] [associations]
symbol:KDM4A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051864 "histone demethylase activity (H3-K36
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0035064 "methylated
histone residue binding" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0005737 GO:GO:0005813 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 CTD:9682 KO:K06709
OMA:KRTAGCC EMBL:DAAA02009042 IPI:IPI00690786 RefSeq:NP_001193245.1
UniGene:Bt.58925 Ensembl:ENSBTAT00000002687 GeneID:512622
KEGG:bta:512622 NextBio:20870473 Uniprot:E1BPL5
Length = 1066
Score = 339 (124.4 bits), Expect = 4.2e-28, P = 4.2e-28
Identities = 73/203 (35%), Positives = 109/203 (53%)
Query: 145 VEKKFWLEMTHGRKGTVEYGVNIEGSAFSSDPNDQLGKCKWHLKTLRGLPQSIFRFLEHI 204
+E+K+W +T YG ++ G+ + ++ W++ LR + + +
Sbjct: 117 LERKYWKNLTFNPP---IYGADVNGTLYEKHVDE------WNIGRLRTILDLVEKESGIT 167
Query: 205 IPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQV 264
I G+ P LY GM + FAWH ED L+SINY H G PK+WY VP H + E++A+
Sbjct: 168 IEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAKGF- 226
Query: 265 YSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFS 324
+A AF + K T+ P +L G+ K Q+ GEF+ITFP YHAGF+
Sbjct: 227 ----FPGSAQSCEAF--LRHKMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFN 280
Query: 325 NGFNCGEAVNFAIRDWFPFGEEA 347
+GFNC E+ NFA R W +G++A
Sbjct: 281 HGFNCAESTNFATRRWIEYGKQA 303
Score = 209 (78.6 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 62/228 (27%), Positives = 108/228 (47%)
Query: 38 YYPTLQEFDDPFIYLQKIAPE-ASQFGICKIISPVKASVSAADVLKKEIKGFEFGTYRQP 96
+YPT++EF + Y+ I + A + G+ K++ P + A+ +I P
Sbjct: 17 FYPTMEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKPRAS---YDDIDDLVI-----P 68
Query: 97 LRLPKWNANDTGVF--FSGERKH-TYDTFESEAIKMLKRQSPRLGDLPPSYVEKKFWLEM 153
+ + +G+F ++ ++K T F A K +PR + +E+K+W +
Sbjct: 69 APIQQLVTGQSGLFTQYNIQKKAMTVREFRKIA-NSDKYCTPRYSEFEE--LERKYWKNL 125
Query: 154 THGRKGTVEYGVNIEGSAFSSDPNDQLGKCKWHLKTLRGLPQSIFRFLEHIIPGITDPML 213
T YG ++ G+ + ++ W++ LR + + + I G+ P L
Sbjct: 126 TFNPP---IYGADVNGTLYEKHVDE------WNIGRLRTILDLVEKESGITIEGVNTPYL 176
Query: 214 YIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVAR 261
Y GM + FAWH ED L+SINY H G PK+WY VP H + E++A+
Sbjct: 177 YFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAK 224
Score = 40 (19.1 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 338 RDWFPFGEEAGKRYARLHK 356
+ W+ E GKR RL K
Sbjct: 206 KSWYSVPPEHGKRLERLAK 224
>RGD|1307528 [details] [associations]
symbol:Kdm4c "lysine (K)-specific demethylase 4C" species:10116
"Rattus norvegicus" [GO:0000790 "nuclear chromatin" evidence=ISO]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISO] [GO:0019899 "enzyme
binding" evidence=ISO] [GO:0032454 "histone demethylase activity
(H3-K9 specific)" evidence=ISO] [GO:0033169 "histone H3-K9
demethylation" evidence=ISO] [GO:0050681 "androgen receptor
binding" evidence=ISO] InterPro:IPR001965 InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
InterPro:IPR002999 RGD:1307528 GO:GO:0046872 GO:GO:0008284
GO:GO:0008270 GO:GO:0006357 GO:GO:0000790 SMART:SM00333
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0032454 IPI:IPI00959259
Ensembl:ENSRNOT00000009083 UCSC:RGD:1307528 ArrayExpress:F1LS62
Uniprot:F1LS62
Length = 1053
Score = 337 (123.7 bits), Expect = 7.4e-28, P = 7.4e-28
Identities = 77/203 (37%), Positives = 111/203 (54%)
Query: 145 VEKKFWLEMTHGRKGTVEYGVNIEGSAFSSDPNDQLGKCKWHLKTLRGLPQSIFRFLEHI 204
+E+K+W +T + YG +I GS + D+ G +W++ L + +
Sbjct: 119 LERKYWKNLTF--VAPI-YGADINGSIY-----DE-GVDEWNIARLNTVLDVVEEECGIS 169
Query: 205 IPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQV 264
I G+ P LY GM + FAWH ED L+SINY H G PK+WY +P H + E++A+
Sbjct: 170 IEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAQGFF 229
Query: 265 YSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFS 324
S S+ G D AF + K T+ P +L G+ K Q+ GEF+ITFP YHAGF+
Sbjct: 230 PS----SSQGCD-AF--LRHKMTLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFN 282
Query: 325 NGFNCGEAVNFAIRDWFPFGEEA 347
+GFNC E+ NFA W +G+ A
Sbjct: 283 HGFNCAESTNFATVRWIDYGKVA 305
>MGI|MGI:1924054 [details] [associations]
symbol:Kdm4c "lysine (K)-specific demethylase 4C"
species:10090 "Mus musculus" [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISO] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=ISO;IPI] [GO:0032454 "histone demethylase activity (H3-K9
specific)" evidence=ISO] [GO:0033169 "histone H3-K9 demethylation"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0050681 "androgen receptor binding" evidence=ISO;IPI]
[GO:0055114 "oxidation-reduction process" evidence=IEA]
InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
MGI:MGI:1924054 GO:GO:0046872 GO:GO:0008284 GO:GO:0008270
GO:GO:0006357 GO:GO:0006351 GO:GO:0000790 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5141 PROSITE:PS01359
SMART:SM00333 PROSITE:PS50304 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 SMART:SM00545 GeneTree:ENSGT00530000063342
GO:GO:0032454 HOGENOM:HOG000231125 KO:K06709 OrthoDB:EOG4N5VW5
CTD:23081 OMA:DIIQGER EMBL:AK173023 EMBL:AK053104 EMBL:AK081769
EMBL:AK144103 EMBL:BC020180 EMBL:BC042424 IPI:IPI00470006
RefSeq:NP_001165566.1 RefSeq:NP_659036.1 UniGene:Mm.209059
ProteinModelPortal:Q8VCD7 SMR:Q8VCD7 STRING:Q8VCD7
PhosphoSite:Q8VCD7 PRIDE:Q8VCD7 Ensembl:ENSMUST00000030102
Ensembl:ENSMUST00000077851 GeneID:76804 KEGG:mmu:76804
UCSC:uc008tjj.2 InParanoid:Q8VCD7 NextBio:345851 Bgee:Q8VCD7
CleanEx:MM_JMJD2C Genevestigator:Q8VCD7
GermOnline:ENSMUSG00000028397 Uniprot:Q8VCD7
Length = 1054
Score = 337 (123.7 bits), Expect = 7.4e-28, P = 7.4e-28
Identities = 77/203 (37%), Positives = 111/203 (54%)
Query: 145 VEKKFWLEMTHGRKGTVEYGVNIEGSAFSSDPNDQLGKCKWHLKTLRGLPQSIFRFLEHI 204
+E+K+W +T + YG +I GS + D+ G +W++ L + +
Sbjct: 119 LERKYWKNLTF--VAPI-YGADINGSIY-----DE-GVDEWNIARLNTVLDVVEEECGIS 169
Query: 205 IPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQV 264
I G+ P LY GM + FAWH ED L+SINY H G PK+WY +P H + E++A+
Sbjct: 170 IEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAQGFF 229
Query: 265 YSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFS 324
S S+ G D AF + K T+ P +L G+ K Q+ GEF+ITFP YHAGF+
Sbjct: 230 PS----SSQGCD-AF--LRHKMTLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFN 282
Query: 325 NGFNCGEAVNFAIRDWFPFGEEA 347
+GFNC E+ NFA W +G+ A
Sbjct: 283 HGFNCAESTNFATVRWIDYGKVA 305
>UNIPROTKB|Q9H3R0 [details] [associations]
symbol:KDM4C "Lysine-specific demethylase 4C" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0032454 "histone demethylase activity
(H3-K9 specific)" evidence=IMP;IDA] [GO:0033169 "histone H3-K9
demethylation" evidence=IMP;IDA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IMP] [GO:0050681 "androgen receptor binding" evidence=IPI]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0000790 "nuclear
chromatin" evidence=IDA] InterPro:IPR001965 InterPro:IPR003347
Pfam:PF02373 PROSITE:PS50016 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 GO:GO:0046872 GO:GO:0008284
GO:GO:0008270 GO:GO:0006357 GO:GO:0006351 GO:GO:0000790
GO:GO:0016702 eggNOG:COG5141 PROSITE:PS01359 SMART:SM00333
PROSITE:PS50304 Pathway_Interaction_DB:ar_pathway
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GO:GO:0032454 HOGENOM:HOG000231125 KO:K06709 OrthoDB:EOG4N5VW5
EMBL:AB037901 EMBL:AB018323 EMBL:AK304032 EMBL:AL354707
EMBL:AL137020 EMBL:AL161443 EMBL:AL445592 EMBL:AL513412
EMBL:BC104859 EMBL:BC104861 EMBL:BC143571 IPI:IPI00027642
IPI:IPI00645825 IPI:IPI00878778 RefSeq:NP_001140166.1
RefSeq:NP_001140167.1 RefSeq:NP_001140168.1 RefSeq:NP_055876.2
UniGene:Hs.709425 PDB:2XDP PDB:2XML PDBsum:2XDP PDBsum:2XML
ProteinModelPortal:Q9H3R0 SMR:Q9H3R0 IntAct:Q9H3R0 STRING:Q9H3R0
PhosphoSite:Q9H3R0 DMDM:97536525 PaxDb:Q9H3R0 PRIDE:Q9H3R0
Ensembl:ENST00000381306 Ensembl:ENST00000381309
Ensembl:ENST00000420847 Ensembl:ENST00000543771 GeneID:23081
KEGG:hsa:23081 UCSC:uc003zkg.3 UCSC:uc003zkh.3 CTD:23081
GeneCards:GC09P006720 H-InvDB:HIX0017555 HGNC:HGNC:17071 MIM:605469
neXtProt:NX_Q9H3R0 PharmGKB:PA164721503 InParanoid:Q9H3R0
OMA:DIIQGER PhylomeDB:Q9H3R0 BindingDB:Q9H3R0 ChEMBL:CHEMBL6175
ChiTaRS:KDM4C EvolutionaryTrace:Q9H3R0 GenomeRNAi:23081
NextBio:44205 ArrayExpress:Q9H3R0 Bgee:Q9H3R0 CleanEx:HS_JMJD2C
Genevestigator:Q9H3R0 GermOnline:ENSG00000107077 Uniprot:Q9H3R0
Length = 1056
Score = 337 (123.7 bits), Expect = 7.5e-28, P = 7.5e-28
Identities = 77/203 (37%), Positives = 111/203 (54%)
Query: 145 VEKKFWLEMTHGRKGTVEYGVNIEGSAFSSDPNDQLGKCKWHLKTLRGLPQSIFRFLEHI 204
+E+K+W +T + YG +I GS + D+ G +W++ L + +
Sbjct: 119 LERKYWKNLTF--VAPI-YGADINGSIY-----DE-GVDEWNIARLNTVLDVVEEECGIS 169
Query: 205 IPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQV 264
I G+ P LY GM + FAWH ED L+SINY H G PK+WY +P H + E++A+
Sbjct: 170 IEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAQGFF 229
Query: 265 YSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFS 324
S S+ G D AF + K T+ P +L G+ K Q+ GEF+ITFP YHAGF+
Sbjct: 230 PS----SSQGCD-AF--LRHKMTLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFN 282
Query: 325 NGFNCGEAVNFAIRDWFPFGEEA 347
+GFNC E+ NFA W +G+ A
Sbjct: 283 HGFNCAESTNFATVRWIDYGKVA 305
>ZFIN|ZDB-GENE-060503-664 [details] [associations]
symbol:kdm4b "lysine (K)-specific demethylase 4B"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 ZFIN:ZDB-GENE-060503-664
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
eggNOG:COG5141 SMART:SM00333 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 SMART:SM00545 GeneTree:ENSGT00530000063342
HOGENOM:HOG000231125 KO:K06709 HOVERGEN:HBG080483 CTD:23030
OrthoDB:EOG4N5VW5 EMBL:BX927276 OMA:QTEKEAP EMBL:BC171698
EMBL:BC171700 IPI:IPI00775179 RefSeq:NP_001076274.1
UniGene:Dr.81759 SMR:Q1LUQ0 Ensembl:ENSDART00000034084
Ensembl:ENSDART00000128161 GeneID:556504 KEGG:dre:556504
InParanoid:Q1LUQ0 NextBio:20881518 Uniprot:Q1LUQ0
Length = 1134
Score = 337 (123.7 bits), Expect = 8.4e-28, P = 8.4e-28
Identities = 75/205 (36%), Positives = 111/205 (54%)
Query: 145 VEKKFWLEMTHGRKGTVEYGVNIEGSAFSSDPNDQLGKCKWHLKTLRGLPQSIFRFLEHI 204
+E+K+W +T + YG +I GS + D ++ W++ L L + + +
Sbjct: 198 LERKYWKNLTFV---SPIYGADISGSLYDPDISE------WNIGHLNTLLDMVEQECGIV 248
Query: 205 IPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQV 264
I G+ P LY GM + FAWH ED L+SINY H G PK+WY +P H + E++A+
Sbjct: 249 IEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGKPKSWYAIPPEHGKRLERLAQGFF 308
Query: 265 YSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFS 324
S+ G D AF + K T+ P IL + + Q+ GEF+ITFP YHAGF+
Sbjct: 309 PG----SSQGCD-AF--LRHKMTLISPSILKKYSIPFDRITQEEGEFMITFPYGYHAGFN 361
Query: 325 NGFNCGEAVNFAIRDWFPFGEEAGK 349
+GFNC E+ NFA W +G+ A +
Sbjct: 362 HGFNCAESTNFATLRWIDYGKMAAQ 386
Score = 204 (76.9 bits), Expect = 2.7e-11, Sum P(3) = 2.7e-11
Identities = 61/228 (26%), Positives = 108/228 (47%)
Query: 38 YYPTLQEFDDPFIYLQKIAPEASQF-GICKIISPVKASVSAADVLKKEIKGFEFGTYRQP 96
+ PT++EF D Y+ + + + G+ K+I P + ++ + E P
Sbjct: 98 FRPTMEEFKDFGKYIAYMETQGAHVAGLAKVIPPKEWKP------RRSYETIEDMVIPAP 151
Query: 97 LRLPKWNANDTGVF--FSGERKH-TYDTFESEAIKMLKRQSPRLGDLPPSYVEKKFWLEM 153
+ + +G+F ++ ++K T + A K +P+ D +E+K+W +
Sbjct: 152 IM--QVVTGQSGLFTQYNIQKKSMTVGEYRKLA-NSKKYNTPQHKDFDD--LERKYWKNL 206
Query: 154 THGRKGTVEYGVNIEGSAFSSDPNDQLGKCKWHLKTLRGLPQSIFRFLEHIIPGITDPML 213
T + YG +I GS + D ++ W++ L L + + +I G+ P L
Sbjct: 207 TFV---SPIYGADISGSLYDPDISE------WNIGHLNTLLDMVEQECGIVIEGVNTPYL 257
Query: 214 YIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVAR 261
Y GM + FAWH ED L+SINY H G PK+WY +P H + E++A+
Sbjct: 258 YFGMWKTTFAWHTEDMDLYSINYLHFGKPKSWYAIPPEHGKRLERLAQ 305
Score = 38 (18.4 bits), Expect = 2.7e-11, Sum P(3) = 2.7e-11
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 338 RDWFPFGEEAGKRYARL 354
+ W+ E GKR RL
Sbjct: 287 KSWYAIPPEHGKRLERL 303
Score = 38 (18.4 bits), Expect = 2.7e-11, Sum P(3) = 2.7e-11
Identities = 8/35 (22%), Positives = 19/35 (54%)
Query: 384 ATVLHQIRSLNNALFCLNNLKMPFDYLQNSQGSFV 418
A + H++ ++ ++ L +PFD + +G F+
Sbjct: 317 AFLRHKMTLISPSI--LKKYSIPFDRITQEEGEFM 349
>RGD|1306378 [details] [associations]
symbol:Kdm4a "lysine (K)-specific demethylase 4A" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0005813 "centrosome" evidence=IEA;ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0014898 "cardiac
muscle hypertrophy in response to stress" evidence=ISO] [GO:0016577
"histone demethylation" evidence=ISO] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA;ISO] [GO:0035064 "methylated
histone residue binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0051864 "histone demethylase activity (H3-K36 specific)"
evidence=IEA;ISO] [GO:0070544 "histone H3-K36 demethylation"
evidence=ISO] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
RGD:1306378 GO:GO:0005737 GO:GO:0005813 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333
GeneTree:ENSGT00530000063342 GO:GO:0051864 CTD:9682 KO:K06709
OrthoDB:EOG4QRH37 EMBL:CH474008 IPI:IPI00949993
RefSeq:NP_001101436.1 UniGene:Rn.95937 Ensembl:ENSRNOT00000066165
GeneID:313539 KEGG:rno:313539 UCSC:RGD:1306378 NextBio:666373
Uniprot:D4A2N4
Length = 971
Score = 336 (123.3 bits), Expect = 8.5e-28, P = 8.5e-28
Identities = 72/203 (35%), Positives = 109/203 (53%)
Query: 145 VEKKFWLEMTHGRKGTVEYGVNIEGSAFSSDPNDQLGKCKWHLKTLRGLPQSIFRFLEHI 204
+E+K+W +T YG ++ G+ + ++ W++ L+ + + +
Sbjct: 26 LERKYWKNLTFNPP---IYGADVNGTLYEQHVDE------WNIGRLKTILDLVEKESGIT 76
Query: 205 IPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQV 264
I G+ P LY GM + FAWH ED L+SINY H G PK+WY VP H + E++A+
Sbjct: 77 IEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAKGF- 135
Query: 265 YSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFS 324
+A AF + K T+ P +L G+ K Q+ GEF+ITFP YHAGF+
Sbjct: 136 ----FPGSAQSCEAF--LRHKMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFN 189
Query: 325 NGFNCGEAVNFAIRDWFPFGEEA 347
+GFNC E+ NFA R W +G++A
Sbjct: 190 HGFNCAESTNFATRRWIEYGKQA 212
>MGI|MGI:2446210 [details] [associations]
symbol:Kdm4a "lysine (K)-specific demethylase 4A"
species:10090 "Mus musculus" [GO:0005634 "nucleus" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0014898 "cardiac muscle hypertrophy in response to stress"
evidence=IMP] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016577
"histone demethylation" evidence=ISO] [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=ISO]
[GO:0035064 "methylated histone residue binding" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051864 "histone demethylase activity (H3-K36 specific)"
evidence=ISO] [GO:0055114 "oxidation-reduction process"
evidence=ISO] [GO:0070544 "histone H3-K36 demethylation"
evidence=ISO] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS50016 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
InterPro:IPR002999 MGI:MGI:2446210 GO:GO:0005737 GO:GO:0005813
GO:GO:0045892 GO:GO:0005730 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 eggNOG:COG5141 PROSITE:PS01359
SMART:SM00333 PROSITE:PS50304 GO:GO:0035064 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 CTD:9682 KO:K06709
OMA:KRTAGCC OrthoDB:EOG4QRH37 ChiTaRS:Kdm4A EMBL:AK129187
EMBL:AK054095 EMBL:AK136085 EMBL:AK145066 EMBL:AK145947
EMBL:AL626764 EMBL:BC028866 IPI:IPI00169645 IPI:IPI00648673
RefSeq:NP_001155295.1 RefSeq:NP_759014.2 UniGene:Mm.234234
ProteinModelPortal:Q8BW72 SMR:Q8BW72 STRING:Q8BW72
PhosphoSite:Q8BW72 PRIDE:Q8BW72 Ensembl:ENSMUST00000097911
Ensembl:ENSMUST00000106403 Ensembl:ENSMUST00000106406 GeneID:230674
KEGG:mmu:230674 HOVERGEN:HBG080483 InParanoid:A2A8L8 NextBio:380043
Bgee:Q8BW72 CleanEx:MM_JMJD2A Genevestigator:Q8BW72
GermOnline:ENSMUSG00000033326 Uniprot:Q8BW72
Length = 1064
Score = 336 (123.3 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 72/203 (35%), Positives = 109/203 (53%)
Query: 145 VEKKFWLEMTHGRKGTVEYGVNIEGSAFSSDPNDQLGKCKWHLKTLRGLPQSIFRFLEHI 204
+E+K+W +T YG ++ G+ + ++ W++ L+ + + +
Sbjct: 117 LERKYWKNLTFNPP---IYGADVNGTLYEQHVDE------WNIGRLKTILDLVEKESGIT 167
Query: 205 IPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQV 264
I G+ P LY GM + FAWH ED L+SINY H G PK+WY VP H + E++A+
Sbjct: 168 IEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAKGF- 226
Query: 265 YSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFS 324
+A AF + K T+ P +L G+ K Q+ GEF+ITFP YHAGF+
Sbjct: 227 ----FPGSAQSCEAF--LRHKMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFN 280
Query: 325 NGFNCGEAVNFAIRDWFPFGEEA 347
+GFNC E+ NFA R W +G++A
Sbjct: 281 HGFNCAESTNFATRRWIEYGKQA 303
Score = 206 (77.6 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 63/230 (27%), Positives = 108/230 (46%)
Query: 38 YYPTLQEFDDPFIYLQKIAPE-ASQFGICKIISPV--KASVSAADVLKKEIKGFEFGTYR 94
+YPT++EF + Y+ I + A + G+ K++ P K S D+ I
Sbjct: 17 FYPTMEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKPRTSYDDIDDLVI--------- 67
Query: 95 QPLRLPKWNANDTGVF--FSGERKH-TYDTFESEAIKMLKRQSPRLGDLPPSYVEKKFWL 151
P + + +G+F ++ ++K T F A K +PR + +E+K+W
Sbjct: 68 -PAPIQQLVTGQSGLFTQYNIQKKAMTVREFRKIA-NSDKYCTPRYSEFEE--LERKYWK 123
Query: 152 EMTHGRKGTVEYGVNIEGSAFSSDPNDQLGKCKWHLKTLRGLPQSIFRFLEHIIPGITDP 211
+T YG ++ G+ + ++ W++ L+ + + + I G+ P
Sbjct: 124 NLTFNPP---IYGADVNGTLYEQHVDE------WNIGRLKTILDLVEKESGITIEGVNTP 174
Query: 212 MLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVAR 261
LY GM + FAWH ED L+SINY H G PK+WY VP H + E++A+
Sbjct: 175 YLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAK 224
Score = 40 (19.1 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 338 RDWFPFGEEAGKRYARLHK 356
+ W+ E GKR RL K
Sbjct: 206 KSWYSVPPEHGKRLERLAK 224
>UNIPROTKB|E2RFE0 [details] [associations]
symbol:KDM4A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051864 "histone demethylase activity (H3-K36
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0035064 "methylated
histone residue binding" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0005737 GO:GO:0005813 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 CTD:9682 KO:K06709
OMA:KRTAGCC EMBL:AAEX03009807 EMBL:AAEX03009806 RefSeq:XP_851005.1
Ensembl:ENSCAFT00000007898 GeneID:482530 KEGG:cfa:482530
NextBio:20857109 Uniprot:E2RFE0
Length = 1066
Score = 336 (123.3 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 72/203 (35%), Positives = 109/203 (53%)
Query: 145 VEKKFWLEMTHGRKGTVEYGVNIEGSAFSSDPNDQLGKCKWHLKTLRGLPQSIFRFLEHI 204
+E+K+W +T YG ++ G+ + ++ W++ L+ + + +
Sbjct: 117 LERKYWKNLTFNPP---IYGADVNGTLYEKHVDE------WNIGRLKTILDLVEKESGIT 167
Query: 205 IPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQV 264
I G+ P LY GM + FAWH ED L+SINY H G PK+WY VP H + E++A+
Sbjct: 168 IEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAKGF- 226
Query: 265 YSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFS 324
+A AF + K T+ P +L G+ K Q+ GEF+ITFP YHAGF+
Sbjct: 227 ----FPGSAQSCEAF--LRHKMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFN 280
Query: 325 NGFNCGEAVNFAIRDWFPFGEEA 347
+GFNC E+ NFA R W +G++A
Sbjct: 281 HGFNCAESTNFATRRWIEYGKQA 303
Score = 206 (77.6 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 61/228 (26%), Positives = 108/228 (47%)
Query: 38 YYPTLQEFDDPFIYLQKIAPE-ASQFGICKIISPVKASVSAADVLKKEIKGFEFGTYRQP 96
+YPT++EF + Y+ I + A + G+ K++ P + A+ +I P
Sbjct: 17 FYPTMEEFRNFSRYMAYIESQGAHRAGLAKVVPPKEWKPRAS---YDDIDDLVI-----P 68
Query: 97 LRLPKWNANDTGVF--FSGERKH-TYDTFESEAIKMLKRQSPRLGDLPPSYVEKKFWLEM 153
+ + +G+F ++ ++K T F A K +PR + +E+K+W +
Sbjct: 69 APIQQLVTGQSGLFTQYNIQKKAMTVREFRKIA-NSDKYCTPRYSEFEE--LERKYWKNL 125
Query: 154 THGRKGTVEYGVNIEGSAFSSDPNDQLGKCKWHLKTLRGLPQSIFRFLEHIIPGITDPML 213
T YG ++ G+ + ++ W++ L+ + + + I G+ P L
Sbjct: 126 TFNPP---IYGADVNGTLYEKHVDE------WNIGRLKTILDLVEKESGITIEGVNTPYL 176
Query: 214 YIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVAR 261
Y GM + FAWH ED L+SINY H G PK+WY VP H + E++A+
Sbjct: 177 YFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAK 224
Score = 40 (19.1 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 338 RDWFPFGEEAGKRYARLHK 356
+ W+ E GKR RL K
Sbjct: 206 KSWYSVPPEHGKRLERLAK 224
>UNIPROTKB|F1SMN9 [details] [associations]
symbol:F1SMN9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
InterPro:IPR002999 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
SMART:SM00333 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063342 OMA:DIIQGER
EMBL:AEMK01181236 EMBL:AEMK01189766 EMBL:CU137711 EMBL:CU481460
EMBL:CU571047 Ensembl:ENSSSCT00000005730 Uniprot:F1SMN9
Length = 1057
Score = 337 (123.7 bits), Expect = 1.2e-27, Sum P(2) = 1.2e-27
Identities = 77/203 (37%), Positives = 111/203 (54%)
Query: 145 VEKKFWLEMTHGRKGTVEYGVNIEGSAFSSDPNDQLGKCKWHLKTLRGLPQSIFRFLEHI 204
+E+K+W +T + YG +I GS + D+ G +W++ L + +
Sbjct: 119 LERKYWKNLTF--VAPI-YGADINGSIY-----DE-GVDEWNIARLNTVLDVVEEECGIS 169
Query: 205 IPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQV 264
I G+ P LY GM + FAWH ED L+SINY H G PK+WY +P H + E++A+
Sbjct: 170 IEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAQGFF 229
Query: 265 YSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFS 324
S S+ G D AF + K T+ P +L G+ K Q+ GEF+ITFP YHAGF+
Sbjct: 230 PS----SSQGCD-AF--LRHKMTLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFN 282
Query: 325 NGFNCGEAVNFAIRDWFPFGEEA 347
+GFNC E+ NFA W +G+ A
Sbjct: 283 HGFNCAESTNFATVRWIDYGKVA 305
Score = 39 (18.8 bits), Expect = 1.2e-27, Sum P(2) = 1.2e-27
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 417 FVCDLCKRDCYLAFTECKSCQRYTCLFHEFKS 448
+VC CK D + F C C LF +S
Sbjct: 743 YVCAPCKFDFFCLF--CCWCTAKRGLFEGMES 772
>TAIR|locus:2064910 [details] [associations]
symbol:AT2G38950 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA;TAS] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0006487 "protein N-linked
glycosylation" evidence=RCA] [GO:0043687 "post-translational
protein modification" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR003347 InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51184 SMART:SM00558 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003700 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 HOGENOM:HOG000241335
KO:K11446 EMBL:AY127026 EMBL:BT001088 IPI:IPI00539605
RefSeq:NP_181429.2 UniGene:At.37227 ProteinModelPortal:Q8L7T6
SMR:Q8L7T6 PRIDE:Q8L7T6 EnsemblPlants:AT2G38950.1 GeneID:818480
KEGG:ath:AT2G38950 TAIR:At2g38950 eggNOG:NOG308887
InParanoid:Q8L7T6 OMA:FDCGFNC PhylomeDB:Q8L7T6
ProtClustDB:CLSN2918209 Genevestigator:Q8L7T6 Uniprot:Q8L7T6
Length = 708
Score = 263 (97.6 bits), Expect = 4.5e-27, Sum P(3) = 4.5e-27
Identities = 73/218 (33%), Positives = 101/218 (46%)
Query: 161 VEYGVNIE----GSAFSSDPNDQLGKCK--WHLKTLRGLPQSIFRFLEHIIPGITDPMLY 214
V YG +++ GS F + K W+L + LP S+ LE + P L
Sbjct: 266 VLYGNDLDTATFGSGFPLSAPSESSKYSSGWNLNSTAKLPGSLLS-LEDC-ESVCVPRLS 323
Query: 215 IGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQVYSRDILSAAG 274
+GM S W E L+S+ Y H GAP+ WY V G H +F K A IL +G
Sbjct: 324 VGMCLSSQFWKSEKERLYSLCYLHVGAPRVWYSVAGCHRSKF-KAAMKSF----ILEMSG 378
Query: 275 EDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFSNGFNCGEAVN 334
E + + P L G+ V + VQ PG++VI FP Y++ F GFNC E N
Sbjct: 379 EQP--KKSHNPVMMMSPYQLSVEGIPVTRCVQHPGQYVIIFPGSYYSAFDCGFNCLEKAN 436
Query: 335 FAIRDWFPFGEEAGKRYARLHKMVILPYQELLFKEVSE 372
FA DW P G+ A + + K ++ Y +LLF E
Sbjct: 437 FAPLDWLPHGDIAVQVNQEMSKTSLISYDKLLFSAARE 474
Score = 81 (33.6 bits), Expect = 4.5e-27, Sum P(3) = 4.5e-27
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 26 VDWTHKISDCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISP 70
V T + + P + PT +EF D Y+ + A +GIC ++ P
Sbjct: 99 VSETKVLEEAPVFNPTEEEFRDTLSYISSLRDRAEPYGICCVVPP 143
Score = 73 (30.8 bits), Expect = 4.5e-27, Sum P(3) = 4.5e-27
Identities = 19/62 (30%), Positives = 28/62 (45%)
Query: 394 NNALFCLNNLKMP-FDYLQNSQGSFVCDLCKRDCYLAFTECK-SCQRYTCLFHEFKSRHC 451
N F +++L+ D ++ C +C D YL+ C S RY+CL H K C
Sbjct: 518 NRREFLISSLESQRMDKSYDAVNKRECCVCLGDLYLSAVNCSCSANRYSCLNHMRKLCAC 577
Query: 452 SC 453
C
Sbjct: 578 PC 579
>UNIPROTKB|F1N9S1 [details] [associations]
symbol:F1N9S1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0032454 "histone demethylase activity (H3-K9
specific)" evidence=IEA] [GO:0050681 "androgen receptor binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0046872 GO:GO:0008284 GO:GO:0008270 GO:GO:0006357
GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333
GeneTree:ENSGT00530000063342 GO:GO:0032454 OMA:DIIQGER
EMBL:AADN02066264 EMBL:AADN02066265 EMBL:AADN02066266
EMBL:AADN02066267 EMBL:AADN02066268 EMBL:AADN02066269
EMBL:AADN02066270 EMBL:AADN02066271 EMBL:AADN02066272
EMBL:AADN02066273 EMBL:AADN02066274 EMBL:AADN02066275
EMBL:AADN02066276 EMBL:AADN02066277 EMBL:AADN02066278
EMBL:AADN02066279 EMBL:AADN02066280 EMBL:AADN02066281
EMBL:AADN02066282 EMBL:AADN02066283 IPI:IPI00679881
Ensembl:ENSGALT00000032836 Uniprot:F1N9S1
Length = 998
Score = 331 (121.6 bits), Expect = 5.2e-27, Sum P(2) = 5.2e-27
Identities = 76/203 (37%), Positives = 109/203 (53%)
Query: 145 VEKKFWLEMTHGRKGTVEYGVNIEGSAFSSDPNDQLGKCKWHLKTLRGLPQSIFRFLEHI 204
+E+K+W +T + YG +I GS + G +W++ L + +
Sbjct: 63 LERKYWKNLTF--VAPI-YGADINGSIYDK------GIEEWNIAHLNTILDVVGEDCGIS 113
Query: 205 IPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQV 264
I G+ P LY GM + FAWH ED L+SINY H G PK+WY +P H + E++A+
Sbjct: 114 IEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAQGFF 173
Query: 265 YSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFS 324
S S+ G + AF + K T+ P IL G+ K Q+ GEF+ITFP YHAGF+
Sbjct: 174 PS----SSHGCN-AF--LRHKMTLISPSILKKYGIPFDKVTQEAGEFMITFPYGYHAGFN 226
Query: 325 NGFNCGEAVNFAIRDWFPFGEEA 347
+GFNC E+ NFA W +G+ A
Sbjct: 227 HGFNCAESTNFATIRWIDYGKAA 249
Score = 40 (19.1 bits), Expect = 5.2e-27, Sum P(2) = 5.2e-27
Identities = 10/33 (30%), Positives = 14/33 (42%)
Query: 419 CDLCKRDCYLAFTECKSCQRYTCLFH-EFKSRH 450
C LC + T C+ C R C+ S+H
Sbjct: 754 CCLCPQTVQAVGTWCRDCGR-ACMGQIHISSQH 785
>CGD|CAL0004209 [details] [associations]
symbol:orf19.2730 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 CGD:CAL0004209
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 EMBL:AACQ01000023
EMBL:AACQ01000025 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
eggNOG:NOG317950 RefSeq:XP_720249.1 RefSeq:XP_720480.1
ProteinModelPortal:Q5AF79 GeneID:3637861 GeneID:3638072
KEGG:cal:CaO19.10244 KEGG:cal:CaO19.2730 Uniprot:Q5AF79
Length = 606
Score = 323 (118.8 bits), Expect = 1.1e-26, P = 1.1e-26
Identities = 103/332 (31%), Positives = 155/332 (46%)
Query: 36 PAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISPVKASVSAADVLKKEIKGFEFGTYRQ 95
P + PT+ EF D + + + I Q GI K+I P + VS E E +
Sbjct: 23 PVFQPTMHEFRDFYNFNKAINNYGMQSGIVKVIPPTQW-VSRVQKCYTE-SNLEQVSIHN 80
Query: 96 PLRLPKWNANDTGVFFSG--ERKHTYDTFESEAIKMLK-RQSPRLGDLPPSYVEKK---- 148
P+ + N N G++ S ER Y F+ + +M K R+ PR S E
Sbjct: 81 PI-VQSINTNAPGIYQSQNIERYKKYSIFQWK--EMAKTRKPPRRKQRGKSETETHSKDI 137
Query: 149 -FW----LEMTHGRKGTVEYGVNIEGSAFSSDPN---DQLGKCKWHLKT---LRGLPQSI 197
F+ E T R +E N S S+P D +G T + LP ++
Sbjct: 138 PFYNINTSEYTDDRCKELES--NYWRSLSYSEPMYGADTMGSVFDKSITAWNVAHLP-NL 194
Query: 198 FRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFE 257
+E +PG+ LY G+ ++FAWH+ED L+SINY H GAPK WY +P +F
Sbjct: 195 LDLMEEKLPGVNQAYLYAGLWKALFAWHLEDQDLYSINYLHFGAPKQWYSIPQSQHEEFY 254
Query: 258 KVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPR 317
+ + ++ + + E + KT + P L +G+ V + + GEF+IT+P
Sbjct: 255 ALMVD-LFHDEFKQCS------EFLRHKTFMVSPAYLEKHGIRVNHTIHREGEFIITYPY 307
Query: 318 VYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGK 349
YHAGF+ +N E+VNFA+ DWF FG+ K
Sbjct: 308 GYHAGFNYDYNLAESVNFALDDWFEFGKRTKK 339
>CGD|CAL0004229 [details] [associations]
symbol:orf19.2743 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0016577 "histone demethylation" evidence=IEA] [GO:0051864
"histone demethylase activity (H3-K36 specific)" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0032454 "histone demethylase activity (H3-K9 specific)"
evidence=IEA] [GO:0001078 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=IEA]
InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00249 SMART:SM00558 CGD:CAL0004229 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 EMBL:AACQ01000023 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 RefSeq:XP_720493.1
ProteinModelPortal:Q5AFV0 GeneID:3637916 KEGG:cal:CaO19.2743
Uniprot:Q5AFV0
Length = 606
Score = 323 (118.8 bits), Expect = 1.1e-26, P = 1.1e-26
Identities = 103/332 (31%), Positives = 154/332 (46%)
Query: 36 PAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISPVKASVSAADVLKKEIKGFEFGTYRQ 95
P + PT+ EF D + + + I Q GI K+I P + VS E E +
Sbjct: 23 PVFQPTMHEFRDFYNFNKAINKYGMQSGIVKVIPPTQW-VSRVQKCYTE-SNLEQVSIHN 80
Query: 96 PLRLPKWNANDTGVFFSG--ERKHTYDTFESEAIKMLK-RQSPRLGDLPPSYVEKK---- 148
P+ + N N G++ S ER Y F+ + +M K R+ PR S E
Sbjct: 81 PI-VQSINTNAPGIYQSQNIERYKKYSIFQWK--EMAKTRKPPRRKQRGKSETETHSKDI 137
Query: 149 -FW----LEMTHGRKGTVEYGVNIEGSAFSSDPN---DQLGKCKWHLKT---LRGLPQSI 197
F+ E T R +E N S S+P D +G T + LP ++
Sbjct: 138 PFYNINTSEYTDDRCKELE--TNYWRSLSYSEPMYGADTMGSVFDKSITAWNVAHLP-NL 194
Query: 198 FRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFE 257
+E +PG+ LY G+ + FAWH+ED L+SINY H GAPK WY +P +F
Sbjct: 195 LDLMEEKLPGVNQAYLYAGLWKASFAWHLEDQDLYSINYLHFGAPKQWYSIPQSQHEEFY 254
Query: 258 KVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPR 317
+ + ++ + + E + KT + P L +G+ V + + GEF+IT+P
Sbjct: 255 ALMVD-LFHDEFKQCS------EFLRHKTFMVSPAYLEKHGIRVNHTIHREGEFIITYPY 307
Query: 318 VYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGK 349
YHAGF+ +N E+VNFA+ DWF FG+ K
Sbjct: 308 GYHAGFNYDYNLAESVNFALDDWFEFGKRTKK 339
>UNIPROTKB|Q5AF79 [details] [associations]
symbol:RPH2 "Potential jumonji-like transcriptional
repressor of PHR1" species:237561 "Candida albicans SC5314"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 CGD:CAL0004209 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 EMBL:AACQ01000023 EMBL:AACQ01000025
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 eggNOG:NOG317950
RefSeq:XP_720249.1 RefSeq:XP_720480.1 ProteinModelPortal:Q5AF79
GeneID:3637861 GeneID:3638072 KEGG:cal:CaO19.10244
KEGG:cal:CaO19.2730 Uniprot:Q5AF79
Length = 606
Score = 323 (118.8 bits), Expect = 1.1e-26, P = 1.1e-26
Identities = 103/332 (31%), Positives = 155/332 (46%)
Query: 36 PAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISPVKASVSAADVLKKEIKGFEFGTYRQ 95
P + PT+ EF D + + + I Q GI K+I P + VS E E +
Sbjct: 23 PVFQPTMHEFRDFYNFNKAINNYGMQSGIVKVIPPTQW-VSRVQKCYTE-SNLEQVSIHN 80
Query: 96 PLRLPKWNANDTGVFFSG--ERKHTYDTFESEAIKMLK-RQSPRLGDLPPSYVEKK---- 148
P+ + N N G++ S ER Y F+ + +M K R+ PR S E
Sbjct: 81 PI-VQSINTNAPGIYQSQNIERYKKYSIFQWK--EMAKTRKPPRRKQRGKSETETHSKDI 137
Query: 149 -FW----LEMTHGRKGTVEYGVNIEGSAFSSDPN---DQLGKCKWHLKT---LRGLPQSI 197
F+ E T R +E N S S+P D +G T + LP ++
Sbjct: 138 PFYNINTSEYTDDRCKELES--NYWRSLSYSEPMYGADTMGSVFDKSITAWNVAHLP-NL 194
Query: 198 FRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFE 257
+E +PG+ LY G+ ++FAWH+ED L+SINY H GAPK WY +P +F
Sbjct: 195 LDLMEEKLPGVNQAYLYAGLWKALFAWHLEDQDLYSINYLHFGAPKQWYSIPQSQHEEFY 254
Query: 258 KVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPR 317
+ + ++ + + E + KT + P L +G+ V + + GEF+IT+P
Sbjct: 255 ALMVD-LFHDEFKQCS------EFLRHKTFMVSPAYLEKHGIRVNHTIHREGEFIITYPY 307
Query: 318 VYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGK 349
YHAGF+ +N E+VNFA+ DWF FG+ K
Sbjct: 308 GYHAGFNYDYNLAESVNFALDDWFEFGKRTKK 339
>UNIPROTKB|Q5AFV0 [details] [associations]
symbol:RPH1 "Potential jumonji-like transcriptional
repressor of PHR1" species:237561 "Candida albicans SC5314"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 CGD:CAL0004229 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 EMBL:AACQ01000023 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 RefSeq:XP_720493.1 ProteinModelPortal:Q5AFV0
GeneID:3637916 KEGG:cal:CaO19.2743 Uniprot:Q5AFV0
Length = 606
Score = 323 (118.8 bits), Expect = 1.1e-26, P = 1.1e-26
Identities = 103/332 (31%), Positives = 154/332 (46%)
Query: 36 PAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISPVKASVSAADVLKKEIKGFEFGTYRQ 95
P + PT+ EF D + + + I Q GI K+I P + VS E E +
Sbjct: 23 PVFQPTMHEFRDFYNFNKAINKYGMQSGIVKVIPPTQW-VSRVQKCYTE-SNLEQVSIHN 80
Query: 96 PLRLPKWNANDTGVFFSG--ERKHTYDTFESEAIKMLK-RQSPRLGDLPPSYVEKK---- 148
P+ + N N G++ S ER Y F+ + +M K R+ PR S E
Sbjct: 81 PI-VQSINTNAPGIYQSQNIERYKKYSIFQWK--EMAKTRKPPRRKQRGKSETETHSKDI 137
Query: 149 -FW----LEMTHGRKGTVEYGVNIEGSAFSSDPN---DQLGKCKWHLKT---LRGLPQSI 197
F+ E T R +E N S S+P D +G T + LP ++
Sbjct: 138 PFYNINTSEYTDDRCKELE--TNYWRSLSYSEPMYGADTMGSVFDKSITAWNVAHLP-NL 194
Query: 198 FRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFE 257
+E +PG+ LY G+ + FAWH+ED L+SINY H GAPK WY +P +F
Sbjct: 195 LDLMEEKLPGVNQAYLYAGLWKASFAWHLEDQDLYSINYLHFGAPKQWYSIPQSQHEEFY 254
Query: 258 KVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPR 317
+ + ++ + + E + KT + P L +G+ V + + GEF+IT+P
Sbjct: 255 ALMVD-LFHDEFKQCS------EFLRHKTFMVSPAYLEKHGIRVNHTIHREGEFIITYPY 307
Query: 318 VYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGK 349
YHAGF+ +N E+VNFA+ DWF FG+ K
Sbjct: 308 GYHAGFNYDYNLAESVNFALDDWFEFGKRTKK 339
>UNIPROTKB|F1RUJ7 [details] [associations]
symbol:JARID2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051574 "positive regulation of histone H3-K9
methylation" evidence=IEA] [GO:0048863 "stem cell differentiation"
evidence=IEA] [GO:0048538 "thymus development" evidence=IEA]
[GO:0048536 "spleen development" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] [GO:0031061 "negative regulation
of histone methylation" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001606
InterPro:IPR003347 InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501
SMART:SM00558 GO:GO:0008285 GO:GO:0003677 GO:GO:0048863
GO:GO:0001889 GO:GO:0003682 GO:GO:0000122 GO:GO:0048536
GO:GO:0048538 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0051574
GO:GO:0035097 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GO:GO:0031061 GeneTree:ENSGT00530000063118
OMA:QRLACIK EMBL:CT841540 EMBL:CT737348 Ensembl:ENSSSCT00000001155
Uniprot:F1RUJ7
Length = 1232
Score = 275 (101.9 bits), Expect = 2.0e-26, Sum P(3) = 2.0e-26
Identities = 76/258 (29%), Positives = 123/258 (47%)
Query: 142 PSYVEKKFW-LEMTHGRKGTVEYG---VNIEGSAFSSDPNDQLGKCKWHLKTLRGLPQSI 197
P+ +E+++W L V G N GS F ++ + W+L L SI
Sbjct: 837 PAEIEQEYWRLVEEKDCHVAVHCGKVDTNTHGSGFPVGKSEPFSRHGWNLTVLPNNTGSI 896
Query: 198 FRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFE 257
R L +PG+T P L IGM+FS W + ++L I+Y H+GA WY +P + E
Sbjct: 897 LRHLG-AVPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWYCIPAEEENKLE 955
Query: 258 KVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPR 317
V +L A G G +++ E + P++L GV V++AVQ+ G+FV+ FP
Sbjct: 956 DVVHT------LLQANGTPG-LQML-ESNVMISPEVLCREGVKVHRAVQQSGQFVVCFPG 1007
Query: 318 VYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHKMVILPYQELLFK----EVSEH 373
+ + G++ E V+FA W G E K R H ++LL++ E +
Sbjct: 1008 SFVSKVCCGYSVSETVHFATTQWTSMGFETAKEMKRRHIAKPFSMEKLLYQIAQAEAKKE 1067
Query: 374 EGTDIPSSVKATVLHQIR 391
G + S++ A +L ++R
Sbjct: 1068 NGPTL-STISA-LLDELR 1083
Score = 98 (39.6 bits), Expect = 2.0e-26, Sum P(3) = 2.0e-26
Identities = 13/43 (30%), Positives = 27/43 (62%)
Query: 28 WTHKISDCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISP 70
W + + P P+ +EF DP +Y++ + P+ ++G+C++I P
Sbjct: 545 WA-AMDEIPVLRPSAKEFHDPLVYIESVRPQVEKYGMCRVIPP 586
Score = 47 (21.6 bits), Expect = 2.0e-26, Sum P(3) = 2.0e-26
Identities = 14/47 (29%), Positives = 20/47 (42%)
Query: 404 KMPFDYLQNSQGSFVCDLCKRDCYLAFTECKSCQRYTCLFHEFKSRH 450
K P +LQ C +C+ CYL+ ++ CL E RH
Sbjct: 1118 KKPRKWLQLETSERRCQVCQHLCYLSMVVQENENVVFCL--ECALRH 1162
>UNIPROTKB|E1C6D5 [details] [associations]
symbol:KDM4A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0035064 "methylated
histone residue binding" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0051864 "histone demethylase activity (H3-K36 specific)"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0005737 GO:GO:0005813 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 OMA:KRTAGCC
EMBL:AADN02012723 EMBL:AADN02012724 IPI:IPI00586868
Ensembl:ENSGALT00000016376 Uniprot:E1C6D5
Length = 1017
Score = 325 (119.5 bits), Expect = 2.1e-26, P = 2.1e-26
Identities = 70/203 (34%), Positives = 105/203 (51%)
Query: 145 VEKKFWLEMTHGRKGTVEYGVNIEGSAFSSDPNDQLGKCKWHLKTLRGLPQSIFRFLEHI 204
+E+K+W +T YG ++ G+ + + W++ L + +
Sbjct: 117 LERKYWKNLTFNAP---IYGADVNGTLYDKHVD------AWNIGRLNTILDVVENESGIT 167
Query: 205 IPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQV 264
I G+ P LY GM + FAWH ED L+SINY H G PK+WY +P H + E++A+
Sbjct: 168 IEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSIPPEHGKRLERLAKGF- 226
Query: 265 YSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFS 324
+A AF + K T+ P IL G+ K Q+ GEF+ITFP YHAGF+
Sbjct: 227 ----FPGSAQSCEAF--LRHKMTLISPSILKKYGIPFDKVTQEAGEFMITFPYSYHAGFN 280
Query: 325 NGFNCGEAVNFAIRDWFPFGEEA 347
+GFNC E+ NFA W +G+++
Sbjct: 281 HGFNCAESTNFATLRWIEYGKQS 303
>ZFIN|ZDB-GENE-060503-246 [details] [associations]
symbol:jarid2b "jumonji, AT rich interactive domain
2b" species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0032452 "histone demethylase activity"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0035097 "histone methyltransferase
complex" evidence=ISS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0051574 "positive regulation of histone H3-K9 methylation"
evidence=ISS] [GO:0031061 "negative regulation of histone
methylation" evidence=ISS] [GO:0048863 "stem cell differentiation"
evidence=ISS] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR001606 InterPro:IPR003347 InterPro:IPR004198
Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00558 ZFIN:ZDB-GENE-060503-246
GO:GO:0007275 GO:GO:0045892 GO:GO:0003677 GO:GO:0048863
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 Gene3D:1.10.150.60
SUPFAM:SSF46774 GO:GO:0051574 GO:GO:0035097 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 eggNOG:NOG327026 HOGENOM:HOG000013203
HOVERGEN:HBG052160 KO:K11478 OrthoDB:EOG4KKZ26 GO:GO:0031061
EMBL:BX842609 EMBL:BX890540 IPI:IPI00500491 RefSeq:NP_001189388.1
UniGene:Dr.108454 Ensembl:ENSDART00000147627 GeneID:558456
KEGG:dre:558456 CTD:558456 GeneTree:ENSGT00530000063118
InParanoid:Q1LVC2 OMA:CDESEIS NextBio:20882479 Bgee:Q1LVC2
Uniprot:Q1LVC2
Length = 1319
Score = 284 (105.0 bits), Expect = 3.2e-26, Sum P(2) = 3.2e-26
Identities = 77/257 (29%), Positives = 120/257 (46%)
Query: 145 VEKKFWLEMTHGRKG--TVEYG---VNIEGSAFSSDPNDQLGKCKWHLKTLRGLPQSIFR 199
VE+ +W + R V YG N GS F ++ K W+L L SI R
Sbjct: 916 VEQDYW-RIVEQRDCHVAVHYGKVDTNTHGSGFPVGKSEPFSKHGWNLTVLPNNSGSILR 974
Query: 200 FLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKV 259
L +PG+T P L IGM+FS W + + L I+Y H+GA WY +P + +KV
Sbjct: 975 HLG-AVPGVTIPWLNIGMVFSTSCWSQDQNRLPYIDYLHTGADCIWYSIPAEEKTKLDKV 1033
Query: 260 ARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPRVY 319
+L A G G E++ EK + P++L G+ V++ VQ+ G+FV+ FP +
Sbjct: 1034 VHT------LLQANGTPG-LEML-EKNVMISPEVLCREGIKVHRTVQQSGQFVVVFPGAF 1085
Query: 320 HAGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHKMVILPYQ-ELLFKEVSEHEGTDI 378
+ G++ E V+FA W G EA K + + P+ E L +++ E
Sbjct: 1086 VSRVCCGYSVSETVHFATPQWMNLGYEAAKDLKC--RRIAKPFSMEKLLYQIATAEAKRE 1143
Query: 379 PSSVKATVLHQIRSLNN 395
V +T+ ++ L N
Sbjct: 1144 NRLVLSTISSLLKDLRN 1160
Score = 145 (56.1 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 77/312 (24%), Positives = 121/312 (38%)
Query: 166 NIEGSAFSSDPNDQLGKCKWHLKTLRGLPQSIFRFLEHIIPGITDPMLYIGMLFSMFAWH 225
N GS F ++ K W+L L SI R L +PG+T P L IGM+FS W
Sbjct: 941 NTHGSGFPVGKSEPFSKHGWNLTVLPNNSGSILRHLG-AVPGVTIPWLNIGMVFSTSCWS 999
Query: 226 VEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQVYSRDI--LSAAGEDGAF--EV 281
+ + L I+Y H+GA WY +P + +KV + + L ++ EV
Sbjct: 1000 QDQNRLPYIDYLHTGADCIWYSIPAEEKTKLDKVVHTLLQANGTPGLEMLEKNVMISPEV 1059
Query: 282 IAEKTTIFPPKILLDNGVSVYKAVQKPGEFV------ITFPRVYHAGFSNGFNCG-EAVN 334
+ + I + + +G V V PG FV + H N G EA
Sbjct: 1060 LCREG-IKVHRTVQQSGQFV---VVFPGAFVSRVCCGYSVSETVHFATPQWMNLGYEAAK 1115
Query: 335 F--AIRDWFPFGEE------AGKRYARLHKMVILPYQELLFKEVSEHEGTDIPSSVKATV 386
R PF E A R +++V+ LL K++ E +A +
Sbjct: 1116 DLKCRRIAKPFSMEKLLYQIATAEAKRENRLVLSTISSLL-KDLRNIEMKQRQELYEAGL 1174
Query: 387 LHQIR--SLNNALFCLNNLKMPFDYLQNSQGSFVCDLCKRDCYLAFTECKSCQRYTCL-- 442
L R + ++ + K P +L C +C+ CYL+ ++ CL
Sbjct: 1175 LSSARYCTHDHNQSPADTRKKPRKWLALESSERRCQMCQHLCYLSMVVQENENVVFCLEC 1234
Query: 443 -FHEFKSRHCSC 453
H + +H +C
Sbjct: 1235 ALH-YVEKHKNC 1245
Score = 92 (37.4 bits), Expect = 3.2e-26, Sum P(2) = 3.2e-26
Identities = 17/67 (25%), Positives = 34/67 (50%)
Query: 4 PRTARNRSPVSKQESYKFKFSDVDWTHKISDCPAYYPTLQEFDDPFIYLQKIAPEASQFG 63
PR R+R ++E + +++ + D P + P+ +EF DP +YL + G
Sbjct: 582 PRLDRDRERERERERSRARYA------ALGDVPIFKPSSREFQDPLVYLDSFREQVESCG 635
Query: 64 ICKIISP 70
+C+++ P
Sbjct: 636 LCRVLPP 642
>UNIPROTKB|F1MH56 [details] [associations]
symbol:JARID2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051574 "positive regulation of histone H3-K9
methylation" evidence=IEA] [GO:0048863 "stem cell differentiation"
evidence=IEA] [GO:0048538 "thymus development" evidence=IEA]
[GO:0048536 "spleen development" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] [GO:0031061 "negative regulation
of histone methylation" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001606
InterPro:IPR003347 InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501
SMART:SM00558 GO:GO:0008285 GO:GO:0003677 GO:GO:0048863
GO:GO:0001889 GO:GO:0003682 GO:GO:0000122 GO:GO:0048536
GO:GO:0048538 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0051574
GO:GO:0035097 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GO:GO:0031061 GeneTree:ENSGT00530000063118
OMA:QRLACIK EMBL:DAAA02055659 EMBL:DAAA02055660 EMBL:DAAA02055661
EMBL:DAAA02055662 IPI:IPI00689067 ProteinModelPortal:F1MH56
Ensembl:ENSBTAT00000017189 NextBio:20874777 Uniprot:F1MH56
Length = 1248
Score = 270 (100.1 bits), Expect = 8.6e-26, Sum P(3) = 8.6e-26
Identities = 74/258 (28%), Positives = 122/258 (47%)
Query: 142 PSYVEKKFW-LEMTHGRKGTVEYG---VNIEGSAFSSDPNDQLGKCKWHLKTLRGLPQSI 197
P+ +E+++W L V G N GS F ++ + W+L L SI
Sbjct: 855 PAEIEQEYWRLVEEKDCHVAVHCGKVDTNTHGSGFPVGKSEPFSRHGWNLTVLPNNTGSI 914
Query: 198 FRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFE 257
R L +PG+T P L IGM+FS W + ++L I+Y H+GA WY +P + E
Sbjct: 915 LRHLG-AVPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWYCIPAEEEHKLE 973
Query: 258 KVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPR 317
V +L A G G +++ E + P++L G+ V++ VQ+ G+FV+ FP
Sbjct: 974 DVVHT------LLQANGTPG-LQML-ESNVMISPEVLCREGIKVHRTVQQSGQFVVCFPG 1025
Query: 318 VYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHKMVILPYQELLFK----EVSEH 373
+ + G++ E V+FA W G E K R H ++LL++ E +
Sbjct: 1026 SFVSKVCCGYSVSETVHFATTQWTSMGFETAKEMKRRHIAKPFSMEKLLYQIAQAEAKKE 1085
Query: 374 EGTDIPSSVKATVLHQIR 391
G + S++ A +L ++R
Sbjct: 1086 NGPTL-STISA-LLDELR 1101
Score = 98 (39.6 bits), Expect = 8.6e-26, Sum P(3) = 8.6e-26
Identities = 13/43 (30%), Positives = 27/43 (62%)
Query: 28 WTHKISDCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISP 70
W + + P P+ +EF DP +Y++ + P+ ++G+C++I P
Sbjct: 563 WA-AMDEIPVLRPSAKEFHDPLVYIESVRPQVEKYGMCRVIPP 604
Score = 47 (21.6 bits), Expect = 8.6e-26, Sum P(3) = 8.6e-26
Identities = 14/47 (29%), Positives = 20/47 (42%)
Query: 404 KMPFDYLQNSQGSFVCDLCKRDCYLAFTECKSCQRYTCLFHEFKSRH 450
K P +LQ C +C+ CYL+ ++ CL E RH
Sbjct: 1136 KKPRKWLQLETSERRCQVCQHLCYLSMVVQENENVVFCL--ECALRH 1180
>FB|FBgn0036004 [details] [associations]
symbol:Jarid2 "Jumonji, AT rich interactive domain 2"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=ISS] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005719
"nuclear euchromatin" evidence=IDA] [GO:0035098 "ESC/E(Z) complex"
evidence=IDA] [GO:0061085 "regulation of histone H3-K27
methylation" evidence=IMP] [GO:0005700 "polytene chromosome"
evidence=IDA] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR017956 Pfam:PF01388 Pfam:PF02373 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00384 SMART:SM00558 EMBL:AE014296
GO:GO:0003677 GO:GO:0035098 GO:GO:0005719 GO:GO:0005700
Gene3D:1.10.150.60 SUPFAM:SSF46774 HSSP:Q24573 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 GO:GO:0061085 CTD:3720
KO:K11478 GeneTree:ENSGT00530000063118 FlyBase:FBgn0036004
RefSeq:NP_648324.1 UniGene:Dm.29618 ProteinModelPortal:Q9VT00
SMR:Q9VT00 MINT:MINT-1562739 STRING:Q9VT00
EnsemblMetazoa:FBtr0076468 GeneID:39103 KEGG:dme:Dmel_CG3654
UCSC:CG3654-RD InParanoid:Q9VT00 OMA:HESCEPA PhylomeDB:Q9VT00
GenomeRNAi:39103 NextBio:811931 ArrayExpress:Q9VT00 Bgee:Q9VT00
Uniprot:Q9VT00
Length = 2351
Score = 264 (98.0 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 64/211 (30%), Positives = 103/211 (48%)
Query: 185 WHLKTLRGLPQSIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKT 244
W+LK L S+ R L ++ G+T P L++GMLFS W+ + H L I Y H+GA K
Sbjct: 2039 WNLKVLTNNSGSVLRSLGPVM-GVTVPTLHVGMLFSACCWYRDPHGLSWIEYLHTGASKL 2097
Query: 245 WYGVPGHHALQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKA 304
WYG+P + F + ++ ++ + + T + PP +L D GVS+ +
Sbjct: 2098 WYGIPDDQSANFRAALTS------LIPTHCQNKTIWLPCD-TVMVPPHMLTDRGVSLCRI 2150
Query: 305 VQKPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHKMVILPYQE 364
QKPGEF++ FPR Y + + G+ E+V FA W ++ + + + ++
Sbjct: 2151 EQKPGEFIVVFPRAYTSSLATGYVVSESVYFATMSWLDLAKDDFRDIHESCEPAMFSLEQ 2210
Query: 365 LLFKEVSEHEGTDIPSSVKATVLHQIRSLNN 395
LLF G D V + LHQ+ + N
Sbjct: 2211 LLFAL-----GYD--QRVNSEALHQMLPMLN 2234
Score = 115 (45.5 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 29/95 (30%), Positives = 50/95 (52%)
Query: 8 RNRSPVSKQESYKFKFSDVDWTHKISDCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKI 67
++ +P+ + F D D T + + P + PT +EF DP ++++I P A++FGICKI
Sbjct: 1716 KDDTPIKMANNTAFPRHD-DPTQMV-EAPIFRPTEKEFADPIEFIERITPIAARFGICKI 1773
Query: 68 ISPVKASVSAADVLKKEIKGFEFGTYRQPLRLPKW 102
I P AS + E++ + Y + L +W
Sbjct: 1774 IPP--ASFKPECRISDEMRFTAYNQYVHKM-LHRW 1805
>UNIPROTKB|Q92833 [details] [associations]
symbol:JARID2 "Protein Jumonji" species:9606 "Homo sapiens"
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001889 "liver
development" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0048536 "spleen development" evidence=IEA]
[GO:0048538 "thymus development" evidence=IEA] [GO:0051574
"positive regulation of histone H3-K9 methylation" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0031061 "negative regulation of histone
methylation" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=IDA] [GO:0032452 "histone demethylase activity"
evidence=ISS] [GO:0048863 "stem cell differentiation" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0003682 "chromatin
binding" evidence=ISS] [GO:0007417 "central nervous system
development" evidence=TAS] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501 SMART:SM00558
GO:GO:0045892 GO:GO:0008285 GO:GO:0003677 GO:GO:0048863
GO:GO:0007417 GO:GO:0001889 GO:GO:0006351 GO:GO:0003682
GO:GO:0016568 GO:GO:0000122 GO:GO:0048536 GO:GO:0048538
EMBL:CH471087 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0051574
GO:GO:0035097 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 CTD:3720 eggNOG:NOG327026 HOGENOM:HOG000013203
HOVERGEN:HBG052160 KO:K11478 OrthoDB:EOG4KKZ26 GO:GO:0031061
EMBL:U57592 EMBL:AK292861 EMBL:AK299349 EMBL:AK303610 EMBL:AL136162
EMBL:AL021938 EMBL:BC046184 EMBL:BC046246 IPI:IPI00023756
IPI:IPI00871836 IPI:IPI00955447 RefSeq:NP_001253969.1
RefSeq:NP_004964.2 UniGene:Hs.269059 ProteinModelPortal:Q92833
SMR:Q92833 DIP:DIP-45494N IntAct:Q92833 STRING:Q92833
PhosphoSite:Q92833 DMDM:61252601 PaxDb:Q92833 PRIDE:Q92833
Ensembl:ENST00000341776 Ensembl:ENST00000397311 GeneID:3720
KEGG:hsa:3720 UCSC:uc003nbj.3 GeneCards:GC06P015246 HGNC:HGNC:6196
HPA:HPA044909 MIM:601594 neXtProt:NX_Q92833 PharmGKB:PA29995
InParanoid:Q92833 OMA:QRLACIK GenomeRNAi:3720 NextBio:14577
ArrayExpress:Q92833 Bgee:Q92833 CleanEx:HS_JARID2
Genevestigator:Q92833 GermOnline:ENSG00000008083 Uniprot:Q92833
Length = 1246
Score = 271 (100.5 bits), Expect = 1.3e-25, Sum P(3) = 1.3e-25
Identities = 74/258 (28%), Positives = 122/258 (47%)
Query: 142 PSYVEKKFW-LEMTHGRKGTVEYG---VNIEGSAFSSDPNDQLGKCKWHLKTLRGLPQSI 197
P+ +E+++W L V G N GS F ++ + W+L L SI
Sbjct: 843 PAEIEQEYWRLVEEKDCHVAVHCGKVDTNTHGSGFPVGKSEPFSRHGWNLTVLPNNTGSI 902
Query: 198 FRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFE 257
R L +PG+T P L IGM+FS W + ++L I+Y H+GA WY +P + E
Sbjct: 903 LRHLG-AVPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWYCIPAEEENKLE 961
Query: 258 KVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPR 317
V +L A G G +++ E + P++L G+ V++ VQ+ G+FV+ FP
Sbjct: 962 DVVHT------LLQANGTPG-LQML-ESNVMISPEVLCKEGIKVHRTVQQSGQFVVCFPG 1013
Query: 318 VYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHKMVILPYQELLFK----EVSEH 373
+ + G++ E V+FA W G E K R H ++LL++ E +
Sbjct: 1014 SFVSKVCCGYSVSETVHFATTQWTSMGFETAKEMKRRHIAKPFSMEKLLYQIAQAEAKKE 1073
Query: 374 EGTDIPSSVKATVLHQIR 391
G + S++ A +L ++R
Sbjct: 1074 NGPTL-STISA-LLDELR 1089
Score = 94 (38.1 bits), Expect = 1.3e-25, Sum P(3) = 1.3e-25
Identities = 14/43 (32%), Positives = 26/43 (60%)
Query: 28 WTHKISDCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISP 70
W + + P P+ +EF DP IY++ + + +FG+C++I P
Sbjct: 551 WA-AMDEIPVLRPSAKEFHDPLIYIESVRAQVEKFGMCRVIPP 592
Score = 48 (22.0 bits), Expect = 1.3e-25, Sum P(3) = 1.3e-25
Identities = 14/47 (29%), Positives = 20/47 (42%)
Query: 404 KMPFDYLQNSQGSFVCDLCKRDCYLAFTECKSCQRYTCLFHEFKSRH 450
K P +LQ C +C+ CYL+ ++ CL E RH
Sbjct: 1124 KKPRKWLQLETSERRCQICQHLCYLSMVVQENENVVFCL--ECALRH 1168
>MGI|MGI:104813 [details] [associations]
symbol:Jarid2 "jumonji, AT rich interactive domain 2"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0001889 "liver development" evidence=IMP] [GO:0003677 "DNA
binding" evidence=IDA;TAS] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0031061 "negative regulation of histone methylation"
evidence=IDA] [GO:0032452 "histone demethylase activity"
evidence=IDA] [GO:0035097 "histone methyltransferase complex"
evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0048536 "spleen development" evidence=IMP]
[GO:0048538 "thymus development" evidence=IMP] [GO:0048863 "stem
cell differentiation" evidence=IMP] [GO:0051574 "positive
regulation of histone H3-K9 methylation" evidence=IDA]
InterPro:IPR001606 InterPro:IPR003347 InterPro:IPR004198
Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00501 SMART:SM00558 MGI:MGI:104813
GO:GO:0008285 GO:GO:0003677 GO:GO:0048863 GO:GO:0001889
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 GO:GO:0000122
GO:GO:0048536 GO:GO:0048538 Gene3D:1.10.150.60 SUPFAM:SSF46774
EMBL:CH466546 GO:GO:0051574 GO:GO:0035097 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 CTD:3720
eggNOG:NOG327026 HOGENOM:HOG000013203 HOVERGEN:HBG052160 KO:K11478
OrthoDB:EOG4KKZ26 GO:GO:0031061 GeneTree:ENSGT00530000063118
OMA:QRLACIK EMBL:D31967 EMBL:AK045214 EMBL:AK147226 EMBL:AK164134
EMBL:BC003374 EMBL:BC052444 EMBL:BC060695 IPI:IPI00124575
IPI:IPI00955365 PIR:T30254 RefSeq:NP_001191972.1
RefSeq:NP_001191973.1 RefSeq:NP_068678.1 UniGene:Mm.25059 PDB:2RQ5
PDBsum:2RQ5 ProteinModelPortal:Q62315 SMR:Q62315 DIP:DIP-34312N
IntAct:Q62315 MINT:MINT-4792531 STRING:Q62315 PhosphoSite:Q62315
PRIDE:Q62315 Ensembl:ENSMUST00000044608 Ensembl:ENSMUST00000173246
Ensembl:ENSMUST00000173704 GeneID:16468 KEGG:mmu:16468
UCSC:uc007qgr.1 UCSC:uc007qgv.1 InParanoid:Q3TPU4 ChiTaRS:JARID2
EvolutionaryTrace:Q62315 NextBio:289745 Bgee:Q62315
CleanEx:MM_JARID2 Genevestigator:Q62315
GermOnline:ENSMUSG00000038518 Uniprot:Q62315
Length = 1234
Score = 272 (100.8 bits), Expect = 2.0e-25, Sum P(3) = 2.0e-25
Identities = 74/258 (28%), Positives = 121/258 (46%)
Query: 142 PSYVEKKFW-LEMTHGRKGTVEYG---VNIEGSAFSSDPNDQLGKCKWHLKTLRGLPQSI 197
P+ +E+++W L V G N GS F ++ + W+L L SI
Sbjct: 841 PAEIEQEYWRLVEEKDCHVAVHCGKVDTNTHGSGFPVGKSEPFSRHGWNLTVLPNNTGSI 900
Query: 198 FRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFE 257
R L +PG+T P L IGM+FS W + ++L I+Y H+GA WY +P + E
Sbjct: 901 LRHLG-AVPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWYCIPAEEENKLE 959
Query: 258 KVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPR 317
V +L G G +++ E + P++L G+ V++ VQ+ G+FV+ FP
Sbjct: 960 DVVHT------LLQGNGTPG-LQML-ESNVMISPEVLCKKGIKVHRTVQQSGQFVVCFPG 1011
Query: 318 VYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHKMVILPYQELLFK----EVSEH 373
+ + G+N E V+FA W G E K R H ++LL++ E +
Sbjct: 1012 SFVSKVCCGYNVSETVHFATTQWTSMGFETAKEMKRRHIAKPFSMEKLLYQIAQAEAKKE 1071
Query: 374 EGTDIPSSVKATVLHQIR 391
G + S++ A +L ++R
Sbjct: 1072 NGPTL-STISA-LLDELR 1087
Score = 91 (37.1 bits), Expect = 2.0e-25, Sum P(3) = 2.0e-25
Identities = 13/43 (30%), Positives = 26/43 (60%)
Query: 28 WTHKISDCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISP 70
W + + P P+ +EF DP IY++ + + ++G+C++I P
Sbjct: 549 WA-AMDEIPVLRPSAKEFHDPLIYIESVRAQVEKYGMCRVIPP 590
Score = 48 (22.0 bits), Expect = 2.0e-25, Sum P(3) = 2.0e-25
Identities = 14/47 (29%), Positives = 20/47 (42%)
Query: 404 KMPFDYLQNSQGSFVCDLCKRDCYLAFTECKSCQRYTCLFHEFKSRH 450
K P +LQ C +C+ CYL+ ++ CL E RH
Sbjct: 1122 KKPRKWLQLETSERRCQICQHLCYLSMVVQENENVVFCL--ECALRH 1166
>UNIPROTKB|F1P6D5 [details] [associations]
symbol:JARID2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051574 "positive regulation of histone H3-K9
methylation" evidence=IEA] [GO:0048863 "stem cell differentiation"
evidence=IEA] [GO:0048538 "thymus development" evidence=IEA]
[GO:0048536 "spleen development" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] [GO:0031061 "negative regulation
of histone methylation" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001606
InterPro:IPR003347 InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501
SMART:SM00558 GO:GO:0008285 GO:GO:0003677 GO:GO:0048863
GO:GO:0001889 GO:GO:0003682 GO:GO:0000122 GO:GO:0048536
GO:GO:0048538 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0051574
GO:GO:0035097 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GO:GO:0031061 GeneTree:ENSGT00530000063118
EMBL:AAEX03017561 EMBL:AAEX03017558 EMBL:AAEX03017559
EMBL:AAEX03017560 Ensembl:ENSCAFT00000015718 Uniprot:F1P6D5
Length = 1249
Score = 271 (100.5 bits), Expect = 4.3e-25, Sum P(3) = 4.3e-25
Identities = 74/258 (28%), Positives = 122/258 (47%)
Query: 142 PSYVEKKFW-LEMTHGRKGTVEYG---VNIEGSAFSSDPNDQLGKCKWHLKTLRGLPQSI 197
P+ +E+++W L V G N GS F ++ + W+L L SI
Sbjct: 846 PAEIEQEYWRLVEEKDCHVAVHCGKVDTNTHGSGFPVGKSEPFSRHGWNLTVLPNNTGSI 905
Query: 198 FRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFE 257
R L +PG+T P L IGM+FS W + ++L I+Y H+GA WY +P + E
Sbjct: 906 LRHLG-AVPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWYCIPAEEENKLE 964
Query: 258 KVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPR 317
V +L A G G +++ E + P++L G+ V++ VQ+ G+FV+ FP
Sbjct: 965 DVVHT------LLQANGTPG-LQML-ESNVMISPEVLCKEGIKVHRTVQQSGQFVVCFPG 1016
Query: 318 VYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHKMVILPYQELLFK----EVSEH 373
+ + G++ E V+FA W G E K R H ++LL++ E +
Sbjct: 1017 SFVSKVCCGYSVSETVHFATTQWTSMGFETAKEMKRRHIAKPFSMEKLLYQIAQAEAKKE 1076
Query: 374 EGTDIPSSVKATVLHQIR 391
G + S++ A +L ++R
Sbjct: 1077 NGPTL-STISA-LLDELR 1092
Score = 90 (36.7 bits), Expect = 4.3e-25, Sum P(3) = 4.3e-25
Identities = 12/43 (27%), Positives = 26/43 (60%)
Query: 28 WTHKISDCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISP 70
W + + P P+ +EF DP +Y++ + + ++G+C++I P
Sbjct: 554 WA-AMDEIPVLRPSAKEFHDPLVYIESVRAQVEKYGMCRVIPP 595
Score = 47 (21.6 bits), Expect = 4.3e-25, Sum P(3) = 4.3e-25
Identities = 14/47 (29%), Positives = 20/47 (42%)
Query: 404 KMPFDYLQNSQGSFVCDLCKRDCYLAFTECKSCQRYTCLFHEFKSRH 450
K P +LQ C +C+ CYL+ ++ CL E RH
Sbjct: 1127 KKPRKWLQLETSERRCQVCQHLCYLSMVVQENENVVFCL--ECALRH 1171
>UNIPROTKB|J9NWC2 [details] [associations]
symbol:JARID2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 OMA:QRLACIK EMBL:AAEX03017561
EMBL:AAEX03017558 EMBL:AAEX03017559 EMBL:AAEX03017560
Ensembl:ENSCAFT00000043518 Uniprot:J9NWC2
Length = 1259
Score = 271 (100.5 bits), Expect = 4.5e-25, Sum P(3) = 4.5e-25
Identities = 74/258 (28%), Positives = 122/258 (47%)
Query: 142 PSYVEKKFW-LEMTHGRKGTVEYG---VNIEGSAFSSDPNDQLGKCKWHLKTLRGLPQSI 197
P+ +E+++W L V G N GS F ++ + W+L L SI
Sbjct: 856 PAEIEQEYWRLVEEKDCHVAVHCGKVDTNTHGSGFPVGKSEPFSRHGWNLTVLPNNTGSI 915
Query: 198 FRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFE 257
R L +PG+T P L IGM+FS W + ++L I+Y H+GA WY +P + E
Sbjct: 916 LRHLG-AVPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWYCIPAEEENKLE 974
Query: 258 KVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPR 317
V +L A G G +++ E + P++L G+ V++ VQ+ G+FV+ FP
Sbjct: 975 DVVHT------LLQANGTPG-LQML-ESNVMISPEVLCKEGIKVHRTVQQSGQFVVCFPG 1026
Query: 318 VYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHKMVILPYQELLFK----EVSEH 373
+ + G++ E V+FA W G E K R H ++LL++ E +
Sbjct: 1027 SFVSKVCCGYSVSETVHFATTQWTSMGFETAKEMKRRHIAKPFSMEKLLYQIAQAEAKKE 1086
Query: 374 EGTDIPSSVKATVLHQIR 391
G + S++ A +L ++R
Sbjct: 1087 NGPTL-STISA-LLDELR 1102
Score = 90 (36.7 bits), Expect = 4.5e-25, Sum P(3) = 4.5e-25
Identities = 12/43 (27%), Positives = 26/43 (60%)
Query: 28 WTHKISDCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISP 70
W + + P P+ +EF DP +Y++ + + ++G+C++I P
Sbjct: 564 WA-AMDEIPVLRPSAKEFHDPLVYIESVRAQVEKYGMCRVIPP 605
Score = 47 (21.6 bits), Expect = 4.5e-25, Sum P(3) = 4.5e-25
Identities = 14/47 (29%), Positives = 20/47 (42%)
Query: 404 KMPFDYLQNSQGSFVCDLCKRDCYLAFTECKSCQRYTCLFHEFKSRH 450
K P +LQ C +C+ CYL+ ++ CL E RH
Sbjct: 1137 KKPRKWLQLETSERRCQVCQHLCYLSMVVQENENVVFCL--ECALRH 1181
>ZFIN|ZDB-GENE-070209-38 [details] [associations]
symbol:zgc:153957 "zgc:153957" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
ZFIN:ZDB-GENE-070209-38 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 SMART:SM00333
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 EMBL:CU468286 IPI:IPI00493629
Ensembl:ENSDART00000087729 ArrayExpress:F1QPD2 Bgee:F1QPD2
Uniprot:F1QPD2
Length = 1482
Score = 314 (115.6 bits), Expect = 7.5e-25, P = 7.5e-25
Identities = 70/203 (34%), Positives = 104/203 (51%)
Query: 145 VEKKFWLEMTHGRKGTVEYGVNIEGSAFSSDPNDQLGKCKWHLKTLRGLPQSIFRFLEHI 204
+E+K+W +T + YG ++ G+ + D + W++ L + I
Sbjct: 119 LERKYWKNLTFV---SPIYGADVSGTLYDEDIEE------WNIGHLNSVLDVIEEDCGVS 169
Query: 205 IPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQV 264
I G+ P LY GM + F+WH ED L+SINY H G PK+WY +P H + E++A
Sbjct: 170 IQGVNTPYLYFGMWKTSFSWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAIG-F 228
Query: 265 YSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFS 324
+ S AF + K T+ P +L + K Q+ GEF+ITFP YHAGF+
Sbjct: 229 FPNSFKSCE----AF--LRHKMTLISPSVLKKYSIPFDKITQEAGEFMITFPYGYHAGFN 282
Query: 325 NGFNCGEAVNFAIRDWFPFGEEA 347
+GFNC E+ NFA W +G+ A
Sbjct: 283 HGFNCAESTNFASIRWIDYGKLA 305
Score = 193 (73.0 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 64/227 (28%), Positives = 108/227 (47%)
Query: 38 YYPTLQEFDDPFIYLQKIAPE-ASQFGICKIISPVKASVSAADVLKKEIKGFEFGTYRQP 96
+ PT++EF D YL + + A + G+ K+I P K + +I F + P
Sbjct: 19 FRPTMEEFKDFNQYLVYMESQGAHRAGLAKVIPP-KGWKPRRNY--DDIDDF---VIQAP 72
Query: 97 LRLPKWNANDTGVF--FSGERKH-TYDTFESEAIKMLKRQSPRLGDLPPSYVEKKFWLEM 153
++ + A +G+F ++ ++K T F A + +PR L +E+K+W +
Sbjct: 73 IQ--QMVAGQSGLFTQYNIQKKPLTVQEFRRLANSDMYC-TPRY--LNYEDLERKYWKNL 127
Query: 154 THGRKGTVEYGVNIEGSAFSSDPNDQLGKCKWHLKTLRGLPQSIFRFLEHIIPGITDPML 213
T + YG ++ G+ + D + W++ L + I I G+ P L
Sbjct: 128 TFV---SPIYGADVSGTLYDEDIEE------WNIGHLNSVLDVIEEDCGVSIQGVNTPYL 178
Query: 214 YIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVA 260
Y GM + F+WH ED L+SINY H G PK+WY +P H + E++A
Sbjct: 179 YFGMWKTSFSWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLA 225
Score = 38 (18.4 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 338 RDWFPFGEEAGKRYARL 354
+ W+ E GKR RL
Sbjct: 208 KSWYAIPPEHGKRLERL 224
Score = 38 (18.4 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 9/38 (23%), Positives = 20/38 (52%)
Query: 381 SVKATVLHQIRSLNNALFCLNNLKMPFDYLQNSQGSFV 418
S +A + H++ ++ ++ L +PFD + G F+
Sbjct: 235 SCEAFLRHKMTLISPSV--LKKYSIPFDKITQEAGEFM 270
>UNIPROTKB|F1NWZ0 [details] [associations]
symbol:JARID2 "Protein Jumonji" species:9031 "Gallus
gallus" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001889 "liver
development" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0031061
"negative regulation of histone methylation" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0048536 "spleen
development" evidence=IEA] [GO:0048538 "thymus development"
evidence=IEA] [GO:0048863 "stem cell differentiation" evidence=IEA]
[GO:0051574 "positive regulation of histone H3-K9 methylation"
evidence=IEA] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501 SMART:SM00558
GO:GO:0008285 GO:GO:0003677 GO:GO:0048863 GO:GO:0003682
GO:GO:0000122 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0051574
GO:GO:0035097 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 IPI:IPI00597467 GO:GO:0031061
GeneTree:ENSGT00530000063118 OMA:QRLACIK EMBL:AADN02027529
EMBL:AADN02027521 EMBL:AADN02027522 EMBL:AADN02027523
EMBL:AADN02027524 EMBL:AADN02027525 EMBL:AADN02027526
EMBL:AADN02027527 EMBL:AADN02027528 Ensembl:ENSGALT00000020740
Uniprot:F1NWZ0
Length = 1220
Score = 257 (95.5 bits), Expect = 1.1e-23, Sum P(3) = 1.1e-23
Identities = 72/255 (28%), Positives = 126/255 (49%)
Query: 145 VEKKFW--LEM--THGRKGTVEYGVNIEGSAFSSDPNDQLGKCKWHLKTLRGLPQSIFRF 200
VE+++W +E +H + N GS F ++ + W+L L SI R
Sbjct: 822 VEQEYWRLVEQKDSHVAVHCGKVDTNTHGSGFPVGKSEPFSRHGWNLTVLPNNTGSILRH 881
Query: 201 LEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVA 260
L +PG+T P L IGM+FS W + ++L I+Y H+GA WY +P + + V
Sbjct: 882 LG-AVPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWYCIPAAEENKLDDVV 940
Query: 261 RNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPRVYH 320
+L A G G E++ E + P+IL G+ V++ VQ+ G+FV+ FP +
Sbjct: 941 HT------LLQANGTPG-LEML-ESNVMISPEILCKEGIRVHRTVQQSGQFVVCFPGSFV 992
Query: 321 AGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHKMVILPY--QELLFK-EVSEHEGTD 377
+ G++ E V+FA W G + K R + + P+ ++LL++ +E + +
Sbjct: 993 SKVCCGYSVSETVHFATTQWTSMGFKTAKEMKR--RRIAKPFSMEKLLYQIATAEAKKEN 1050
Query: 378 IPS-SVKATVLHQIR 391
P+ S +++L ++R
Sbjct: 1051 GPTLSTISSLLGELR 1065
Score = 90 (36.7 bits), Expect = 1.1e-23, Sum P(3) = 1.1e-23
Identities = 12/39 (30%), Positives = 25/39 (64%)
Query: 32 ISDCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISP 70
+ + P P+ +EF DP IY++ + + ++G+C++I P
Sbjct: 530 LGEIPILRPSTKEFHDPLIYIESVRAQVEKYGMCRVIPP 568
Score = 49 (22.3 bits), Expect = 1.1e-23, Sum P(3) = 1.1e-23
Identities = 14/51 (27%), Positives = 22/51 (43%)
Query: 400 LNNLKMPFDYLQNSQGSFVCDLCKRDCYLAFTECKSCQRYTCLFHEFKSRH 450
++ K P +LQ C +C+ CYL+ ++ CL E RH
Sbjct: 1096 MDGKKKPRKWLQLETSERRCQICQHLCYLSMVVQENENVVFCL--ECALRH 1144
>UNIPROTKB|Q5F363 [details] [associations]
symbol:JARID2 "Protein Jumonji" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0003682 "chromatin
binding" evidence=ISS] [GO:0051574 "positive regulation of histone
H3-K9 methylation" evidence=ISS] [GO:0031061 "negative regulation
of histone methylation" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0032452 "histone demethylase activity"
evidence=ISS] [GO:0048863 "stem cell differentiation" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501 SMART:SM00558
GO:GO:0007275 GO:GO:0045892 GO:GO:0003677 GO:GO:0048863
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 Gene3D:1.10.150.60
SUPFAM:SSF46774 GO:GO:0051574 GO:GO:0035097 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 EMBL:AJ851787
IPI:IPI00597467 RefSeq:NP_001012880.1 UniGene:Gga.12117
ProteinModelPortal:Q5F363 STRING:Q5F363 GeneID:420839
KEGG:gga:420839 CTD:3720 eggNOG:NOG327026 HOGENOM:HOG000013203
HOVERGEN:HBG052160 InParanoid:Q5F363 KO:K11478 OrthoDB:EOG4KKZ26
NextBio:20823696 GO:GO:0031061 Uniprot:Q5F363
Length = 1233
Score = 257 (95.5 bits), Expect = 1.2e-23, Sum P(3) = 1.2e-23
Identities = 72/255 (28%), Positives = 126/255 (49%)
Query: 145 VEKKFW--LEM--THGRKGTVEYGVNIEGSAFSSDPNDQLGKCKWHLKTLRGLPQSIFRF 200
VE+++W +E +H + N GS F ++ + W+L L SI R
Sbjct: 835 VEQEYWRLVEQKDSHVAVHCGKVDTNTHGSGFPVGKSEPFSRHGWNLTVLPNNTGSILRH 894
Query: 201 LEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVA 260
L +PG+T P L IGM+FS W + ++L I+Y H+GA WY +P + + V
Sbjct: 895 LG-AVPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWYCIPAAEENKLDDVV 953
Query: 261 RNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPRVYH 320
+L A G G E++ E + P+IL G+ V++ VQ+ G+FV+ FP +
Sbjct: 954 HT------LLQANGTPG-LEML-ESNVMISPEILCKEGIRVHRTVQQSGQFVVCFPGSFV 1005
Query: 321 AGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHKMVILPY--QELLFK-EVSEHEGTD 377
+ G++ E V+FA W G + K R + + P+ ++LL++ +E + +
Sbjct: 1006 SKVCCGYSVSETVHFATTQWTSMGFKTAKEMKR--RRIAKPFSMEKLLYQIATAEAKKEN 1063
Query: 378 IPS-SVKATVLHQIR 391
P+ S +++L ++R
Sbjct: 1064 GPTLSTISSLLGELR 1078
Score = 90 (36.7 bits), Expect = 1.2e-23, Sum P(3) = 1.2e-23
Identities = 12/39 (30%), Positives = 25/39 (64%)
Query: 32 ISDCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISP 70
+ + P P+ +EF DP IY++ + + ++G+C++I P
Sbjct: 543 LGEIPILRPSTKEFHDPLIYIESVRAQVEKYGMCRVIPP 581
Score = 49 (22.3 bits), Expect = 1.2e-23, Sum P(3) = 1.2e-23
Identities = 14/51 (27%), Positives = 22/51 (43%)
Query: 400 LNNLKMPFDYLQNSQGSFVCDLCKRDCYLAFTECKSCQRYTCLFHEFKSRH 450
++ K P +LQ C +C+ CYL+ ++ CL E RH
Sbjct: 1109 MDGKKKPRKWLQLETSERRCQICQHLCYLSMVVQENENVVFCL--ECALRH 1157
>ZFIN|ZDB-GENE-061218-1 [details] [associations]
symbol:jarid2a "jumonji, AT rich interactive domain
2a" species:7955 "Danio rerio" [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501 SMART:SM00558
ZFIN:ZDB-GENE-061218-1 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 GeneTree:ENSGT00530000063118
EMBL:CR391941 IPI:IPI00799170 Ensembl:ENSDART00000086333
Bgee:E7F6J7 Uniprot:E7F6J7
Length = 1171
Score = 264 (98.0 bits), Expect = 1.9e-23, Sum P(3) = 1.9e-23
Identities = 73/247 (29%), Positives = 118/247 (47%)
Query: 145 VEKKFWLEMTHGRKGT-VEYG---VNIEGSAFSSDPNDQLGKCKWHLKTLRGLPQSIFRF 200
VEK++W + V G GS F ++ K W+L L SI R
Sbjct: 783 VEKEYWRLVDEKESHVAVHCGRVDTKTHGSGFPVGKSEPFSKHGWNLNVLSNNSGSILRH 842
Query: 201 LEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVA 260
L +PG+T P L IGM+FS W + + L I+Y H+GA WY +P + +KV
Sbjct: 843 LG-AVPGVTIPWLNIGMVFSTSCWCRDQNSLPYIDYLHTGADCIWYCIPAEEKSKLDKVV 901
Query: 261 RNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPRVYH 320
+L A G G E++ E+ + P++L GV VY+ VQ G+F++ FP +
Sbjct: 902 HT------LLQANGTPG-LEML-ERNIMISPEVLRRKGVKVYRTVQHSGQFMVCFPGTFV 953
Query: 321 AGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHKMVILPY--QELLFKEVS-EHEGTD 377
A G++ E ++FA W G EA K R + + P+ ++LL++ + E +
Sbjct: 954 AKVCCGYSVSETMHFANLQWMKLGYEAAKDLKR--RRIEEPFSTEKLLYQITTCERDNKQ 1011
Query: 378 IPSSVKA 384
+ ++V +
Sbjct: 1012 LMTAVSS 1018
Score = 87 (35.7 bits), Expect = 1.9e-23, Sum P(3) = 1.9e-23
Identities = 22/77 (28%), Positives = 41/77 (53%)
Query: 31 KISDCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISPVKASVSAADVLKKEIKGFEF 90
+I++ P +YP EF DP +++ +A FG+ +++ P A LK+E++ F
Sbjct: 498 EITELPVFYPNTHEFHDPLTFMELARGQAEAFGLFRVVPP--AGWRPECKLKEEMR---F 552
Query: 91 GTYRQPL-RLPK-WNAN 105
+Y Q + +L + W N
Sbjct: 553 VSYVQHVHKLGRRWGPN 569
Score = 41 (19.5 bits), Expect = 1.9e-23, Sum P(3) = 1.9e-23
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 419 CDLCKRDCYLAFTECKSCQRYTCL 442
C +C+ CYL+ +S CL
Sbjct: 1072 CQVCQHLCYLSMVVHESDNVVFCL 1095
Score = 38 (18.4 bits), Expect = 3.9e-23, Sum P(3) = 3.9e-23
Identities = 15/62 (24%), Positives = 25/62 (40%)
Query: 363 QELLFKEVSEHEGTDIPSSVKATVLHQIRSLNNALFCLNNLKMPFDYLQNSQGSFVCDLC 422
Q L + + HE ++ ++ L I+ + LKM F Y + S V +C
Sbjct: 1076 QHLCYLSMVVHESDNVVFCLECA-LRYIQKRRSP----RGLKMMFRYSEEQLNSLVNRVC 1130
Query: 423 KR 424
R
Sbjct: 1131 GR 1132
>ASPGD|ASPL0000057825 [details] [associations]
symbol:AN1060 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR017956 Pfam:PF02373 PROSITE:PS51184
SMART:SM00249 SMART:SM00384 SMART:SM00558 GO:GO:0005634
EMBL:BN001308 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0008168 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
EnsemblFungi:CADANIAT00001580 HOGENOM:HOG000206472 OMA:NIEKQRS
Uniprot:C8VTU6
Length = 1405
Score = 301 (111.0 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 69/188 (36%), Positives = 104/188 (55%)
Query: 163 YGVNIEGSAFSSDPNDQLGKCKWHLKTLRGLPQSIFRFLEHIIPGITDPMLYIGMLFSMF 222
YG ++ GS F +D++ W++ L P ++ + +PG+ LY+GM + F
Sbjct: 337 YGADMPGSLF----DDRI--TSWNVAKL---P-NLLDVIGQKVPGVNTAYLYLGMWKATF 386
Query: 223 AWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQVYSRDILSAAGEDGAFEVI 282
AWH+ED L+SINY H GAPK WY + A +FE+ A ++ D + D + +
Sbjct: 387 AWHLEDVDLYSINYIHFGAPKQWYSISQEDAPRFEQ-AMKSIWPSDAKTC---D---QFL 439
Query: 283 AEKTTIFPPKILLDN-GVSVYKAVQKPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDWF 341
KT + P +L G++V K V GEFVIT+P YH+G++ G+NC E+VNFA W
Sbjct: 440 RHKTYLVSPSLLKSQYGITVNKMVHYEGEFVITYPYGYHSGYNLGYNCAESVNFATEKWL 499
Query: 342 PFGEEAGK 349
+G A K
Sbjct: 500 DYGRVAKK 507
Score = 39 (18.8 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 8/31 (25%), Positives = 16/31 (51%)
Query: 40 PTLQEFDDPFIYLQKIAPEASQFGICKIISP 70
P + F D ++++I + G+ K+I P
Sbjct: 81 PVFKPFRDFQSFIKRIDKYGMRSGVVKVIPP 111
>UNIPROTKB|F5GYH2 [details] [associations]
symbol:KDM4C "Lysine-specific demethylase 4C" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL354707 EMBL:AL137020
EMBL:AL161443 EMBL:AL445592 EMBL:AL513412 HGNC:HGNC:17071
ChiTaRS:KDM4C IPI:IPI01018984 ProteinModelPortal:F5GYH2 SMR:F5GYH2
Ensembl:ENST00000536108 ArrayExpress:F5GYH2 Bgee:F5GYH2
Uniprot:F5GYH2
Length = 629
Score = 279 (103.3 bits), Expect = 1.6e-21, P = 1.6e-21
Identities = 57/126 (45%), Positives = 76/126 (60%)
Query: 222 FAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQVYSRDILSAAGEDGAFEV 281
FAWH ED L+SINY H G PK+WY +P H + E++A+ S S+ G D AF
Sbjct: 6 FAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAQGFFPS----SSQGCD-AF-- 58
Query: 282 IAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDWF 341
+ K T+ P +L G+ K Q+ GEF+ITFP YHAGF++GFNC E+ NFA W
Sbjct: 59 LRHKMTLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWI 118
Query: 342 PFGEEA 347
+G+ A
Sbjct: 119 DYGKVA 124
>UNIPROTKB|E7EV17 [details] [associations]
symbol:KDM4C "Lysine-specific demethylase 4C" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 SMART:SM00333
EMBL:AL354707 EMBL:AL137020 EMBL:AL161443 EMBL:AL445592
EMBL:AL513412 HGNC:HGNC:17071 ChiTaRS:KDM4C IPI:IPI00910024
ProteinModelPortal:E7EV17 SMR:E7EV17 Ensembl:ENST00000442236
UCSC:uc011lmk.2 ArrayExpress:E7EV17 Bgee:E7EV17 Uniprot:E7EV17
Length = 801
Score = 279 (103.3 bits), Expect = 2.7e-21, P = 2.7e-21
Identities = 57/126 (45%), Positives = 76/126 (60%)
Query: 222 FAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQVYSRDILSAAGEDGAFEV 281
FAWH ED L+SINY H G PK+WY +P H + E++A+ S S+ G D AF
Sbjct: 6 FAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAQGFFPS----SSQGCD-AF-- 58
Query: 282 IAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDWF 341
+ K T+ P +L G+ K Q+ GEF+ITFP YHAGF++GFNC E+ NFA W
Sbjct: 59 LRHKMTLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWI 118
Query: 342 PFGEEA 347
+G+ A
Sbjct: 119 DYGKVA 124
>POMBASE|SPAC343.11c [details] [associations]
symbol:msc1 "multi-copy suppressor of Chk1" species:4896
"Schizosaccharomyces pombe" [GO:0000118 "histone deacetylase
complex" evidence=IDA] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0000812 "Swr1 complex" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IPI] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISM] [GO:0006974 "response to DNA damage
stimulus" evidence=IGI] [GO:0007126 "meiosis" evidence=IMP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IMP] [GO:0016577 "histone demethylation"
evidence=ISM] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] [GO:0019787 "small
conjugating protein ligase activity" evidence=ISM] [GO:0032452
"histone demethylase activity" evidence=ISM] [GO:0043486 "histone
exchange" evidence=IPI] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 PomBase:SPAC343.11c
GO:GO:0007126 EMBL:CU329670 GO:GO:0006355 GenomeReviews:CU329670_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0016573 GO:GO:0006974
GO:GO:0016706 GO:GO:0000812 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0019787 GO:GO:0000118 OrthoDB:EOG4Z39NV
InterPro:IPR003349 PROSITE:PS51183 SMART:SM00545 eggNOG:NOG327026
GO:GO:0032452 PIR:T38660 RefSeq:NP_593431.1
ProteinModelPortal:Q9UT79 STRING:Q9UT79 EnsemblFungi:SPAC343.11c.1
GeneID:2541710 KEGG:spo:SPAC343.11c NextBio:20802802 Uniprot:Q9UT79
Length = 1588
Score = 218 (81.8 bits), Expect = 4.3e-14, P = 4.3e-14
Identities = 97/402 (24%), Positives = 151/402 (37%)
Query: 67 IISPVKASVSAADVLKKEIKGFEFGTYRQPLRLPKWNANDTGVFFSGERKHTYDT----F 122
I S +++S A LKK++ F T PL LP N + T T F
Sbjct: 359 ISSFLQSSNELASSLKKQLPSFLAQT---PLTLPS-NTKTPPASARQSSRRTRSTSGKGF 414
Query: 123 ESEAIKMLKRQSPRLGDLPPSYVEKKFW---LEMTHGRKGTVEY----------GVNIEG 169
E++ L L L P +E FW T Y G +
Sbjct: 415 ETKISINLDSDIKLLNTLSP--LETFFWCCSFPSTASTSSPFSYYPESLPTPLLGRAVNT 472
Query: 170 SAFSSDPNDQLGKCKWHLKTLRGLPQSIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDH 229
+AF + + W+L + S RF PGI + +G + W +
Sbjct: 473 TAFPTSRQNAYYNDPWNLYFIHFSKLSPLRFTP---PGILTSTISLGQPLTCQGWQRDSM 529
Query: 230 YLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIF 289
L ++YHH GA + WY +P ++EK+ + LS + E + + +
Sbjct: 530 SLFGMHYHHYGAQRIWYVIPEVDGPKYEKLLND-------LSPSFIQEKPETLIKSKILL 582
Query: 290 PPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDWFP--FGEEA 347
P +L+ NG+ V VQ EFVIT P Y+ GF+ E+V FA ++W E +
Sbjct: 583 PISMLISNGIQVLTFVQNSNEFVITSPNTYYTVLDTGFSLSESVPFATKEWIQDMHAENS 642
Query: 348 GKRYARLHKMVILPYQELLFKEVS----EHEGTDIPSSVKATVLHQIRSLNNALFCLNNL 403
Y LH +L + H + + +K V ++ +L N F +
Sbjct: 643 FNMYKNLHISAPFSLDHILLANATLDKTVHSAYWLMTCLKDRVDREL-TLRNE-FRKRHP 700
Query: 404 KMPFDYLQNSQGSFVCDLCKRDCYLAFTECKSCQRYTCLFHE 445
+ + C CK YLA E K+ + CL H+
Sbjct: 701 LLTWIPTPLESSVMACAFCKTFAYLASIEEKNGTKTACLSHK 742
>SGD|S000002503 [details] [associations]
symbol:GIS1 "Histone demethylase and transcription factor"
species:4932 "Saccharomyces cerevisiae" [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0071071 "regulation of phospholipid biosynthetic
process" evidence=IMP] [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=IC] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0060275 "maintenance of stationary phase
in response to starvation" evidence=IMP] [GO:0001300 "chronological
cell aging" evidence=IMP] [GO:0000978 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP;IDA] [GO:0001078 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in negative
regulation of transcription" evidence=IDA;IMP] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0016577 "histone
demethylation" evidence=IMP] [GO:0051864 "histone demethylase
activity (H3-K36 specific)" evidence=IMP] InterPro:IPR003347
InterPro:IPR007087 InterPro:IPR013087 InterPro:IPR015880
Pfam:PF02373 PROSITE:PS00028 PROSITE:PS50157 PROSITE:PS51184
SMART:SM00355 SMART:SM00558 SGD:S000002503 GO:GO:0005739
GO:GO:0005634 GO:GO:0046872 GO:GO:0001078 GO:GO:0008270
EMBL:BK006938 GO:GO:0001300 GO:GO:0000978 GO:GO:0001077
eggNOG:COG5048 Gene3D:3.30.160.60 EMBL:Z47746 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 PIR:S51245
RefSeq:NP_010381.1 ProteinModelPortal:Q03833 SMR:Q03833
IntAct:Q03833 MINT:MINT-4480789 STRING:Q03833 PaxDb:Q03833
PeptideAtlas:Q03833 EnsemblFungi:YDR096W GeneID:851670
KEGG:sce:YDR096W CYGD:YDR096w GeneTree:ENSGT00530000063342
HOGENOM:HOG000112726 OrthoDB:EOG4NGKW6 NextBio:969289
Genevestigator:Q03833 GermOnline:YDR096W GO:GO:0051864
GO:GO:0060275 GO:GO:0071071 Uniprot:Q03833
Length = 894
Score = 211 (79.3 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 80/320 (25%), Positives = 136/320 (42%)
Query: 32 ISDCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISPVK-ASVSAADVLKKEIKGFEF 90
I P + P++ EF + ++ +I + GI K+I P + + + +K +
Sbjct: 9 IDGVPVFKPSMMEFANFQYFIDEITKFGIENGIVKVIPPKEWLELLEGSPPAESLKTIQL 68
Query: 91 GTYRQPLRLPKWNANDTGVFFSGERKHTYDTFESEAIKMLKRQ-SPRL--GDLPPSYVEK 147
+ Q + +W+ ++ GVF S E ++ ++ K L R+ GD +++
Sbjct: 69 DSPIQQ-QAKRWDKHENGVF-SIENEYDNKSYNLTQWKNLAESLDSRISQGDFNDKTLKE 126
Query: 148 KFWLEMTHGRKGTVEYGVNIEGS-----AFSS-----DPNDQLGKCKWHLKTLRGLPQSI 197
++ + + +E AFS D N + L L LP SI
Sbjct: 127 NCRVDSQQDCYDLAQLQI-LESDFWKTIAFSKPFYAVDENSSIFPYDLTLWNLNNLPDSI 185
Query: 198 FRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFE 257
++ L G +F WH+++ SINY H GAPK WY +P + QF
Sbjct: 186 ---------NSSNRRLLTGQSKCIFPWHLDEQNKCSINYLHFGAPKQWYSIPSANTDQFL 236
Query: 258 KVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPR 317
K+ S++ S AF I + I P L N + + VQ EF+ITFP
Sbjct: 237 KIL-----SKEPSSNKENCPAF--IRHQNIITSPDFLRKNNIKFNRVVQFQHEFIITFPY 289
Query: 318 VYHAGFSNGFNCGEAVNFAI 337
++GF+ G+N GE++ F +
Sbjct: 290 CMYSGFNYGYNFGESIEFIL 309
>UNIPROTKB|G4NIH1 [details] [associations]
symbol:MGG_09841 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00558 EMBL:CM001236
RefSeq:XP_003720398.1 EnsemblFungi:MGG_09841T0 GeneID:2680840
KEGG:mgr:MGG_09841 Uniprot:G4NIH1
Length = 419
Score = 193 (73.0 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 50/134 (37%), Positives = 65/134 (48%)
Query: 205 IPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQV 264
IPG+ P Y G + F WHVED L S+N+ G K W+ +P L E+V R
Sbjct: 216 IPGLCYPYKYEGTALAPFTWHVEDVGLISLNHLFQGV-KVWFCIPRADRLAAEEVFR--- 271
Query: 265 YSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFS 324
S + + A + + T+ L GV V VQ+ GE V T P YH+GFS
Sbjct: 272 -SAPMTATAAIPHHEQFMRHNATLDGHAALRRAGVRVVPVVQRAGEIVATLPEAYHSGFS 330
Query: 325 NGFNCGEAVNFAIR 338
G+ EAVNFA R
Sbjct: 331 AGYTVCEAVNFADR 344
>POMBASE|SPBP19A11.06 [details] [associations]
symbol:lid2 "Lid2 complex subunit, predicted histone
demethylase Lid2" species:4896 "Schizosaccharomyces pombe"
[GO:0000070 "mitotic sister chromatid segregation" evidence=IMP]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0019787 "small conjugating protein ligase
activity" evidence=ISM] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
silencing at centromere" evidence=IMP] [GO:0031507 "heterochromatin
assembly" evidence=IMP] [GO:0031618 "nuclear centromeric
heterochromatin" evidence=IDA] [GO:0031934 "mating-type region
heterochromatin" evidence=IDA] [GO:0034630 "RITS complex
localization" evidence=IMP] [GO:0034647 "histone demethylase
activity (H3-trimethyl-K4 specific)" evidence=IDA] [GO:0048189
"Lid2 complex" evidence=IDA] [GO:0051567 "histone H3-K9
methylation" evidence=IMP] [GO:0051572 "negative regulation of
histone H3-K4 methylation" evidence=IMP] InterPro:IPR001841
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51011 PROSITE:PS51184
SMART:SM00184 SMART:SM00249 SMART:SM00558 PomBase:SPBP19A11.06
Prosite:PS00518 GO:GO:0046872 GO:GO:0003677 EMBL:CU329671
GO:GO:0008270 GO:GO:0006351 GenomeReviews:CU329671_GR GO:GO:0030466
GO:GO:0030702 GO:GO:0000070 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0031934 GO:GO:0051567
Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0048189 GO:GO:0019787
GO:GO:0031507 GO:GO:0051572 GO:GO:0031618 PROSITE:PS51183
GO:GO:0034630 eggNOG:NOG327026 GO:GO:0034647 OrthoDB:EOG44N21B
KO:K11446 PIR:T50313 RefSeq:NP_596174.1 ProteinModelPortal:Q9HDV4
IntAct:Q9HDV4 STRING:Q9HDV4 EnsemblFungi:SPBP19A11.06.1
GeneID:2541299 KEGG:spo:SPBP19A11.06 OMA:LPCVIRE NextBio:20802409
Uniprot:Q9HDV4
Length = 1513
Score = 201 (75.8 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 76/331 (22%), Positives = 135/331 (40%)
Query: 131 KRQSPRLGDLPPSYVEKKFWLEMTHGRKG--TVE-------YGVNIEGSAFSSD--PNDQ 179
+ S +L +L +E +W + G +E Y I+ S S + P ++
Sbjct: 349 RNSSSKLTNLTEDDIELFYWSSLAESNSGFAPLELEGLSQAYTSTIQSSLPSKEVFPLEK 408
Query: 180 LGKCKWHLKTLRGLPQSIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHS 239
W+L L +F + + +T L IGM+F W +++H
Sbjct: 409 YSSEPWNLHNLPFENPCLFNYSFSDLSSLTITRLSIGMVFYTHGWTKSSLSTGLLHHHRF 468
Query: 240 GAPKTWYGVPGHHALQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGV 299
G TWY +P + FE+ + Y + + VI P L++NG
Sbjct: 469 GDTVTWYVLPPDESDAFERYLISS-YPQYTMEDLNRSNGLPVIVS------PSSLIENGF 521
Query: 300 SVYKAVQKPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHKMVI 359
+P EF++ P YH GF GF+ E+VNFA +W G + L M I
Sbjct: 522 HPIAIDLRPNEFLVVSPNSYHMGFHQGFSSFESVNFATVNWIKDGL-LNSSISVLKSMRI 580
Query: 360 ---LPYQELLFKEV-SEHEGTDIPSSVKA---TVLHQIRSLNNALFCLNNLKMPFDYLQN 412
+ Y+ ++ V S++ +K + ++ S N + + N++ L++
Sbjct: 581 PSSVSYEAVIISMVLSKNPCFSSEWLIKCFEDMIANESASKNEIMKLVPNIQAL--KLES 638
Query: 413 SQGSFV-CDLCKRDCYLAFTECKSCQRYTCL 442
S + C CK+ C+L+F +C +++ CL
Sbjct: 639 SVPLEIRCSNCKQPCFLSFMQCHEPKKFICL 669
>UNIPROTKB|I3LQ64 [details] [associations]
symbol:KDM4A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 Ensembl:ENSSSCT00000031638
Uniprot:I3LQ64
Length = 911
Score = 173 (66.0 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 40/102 (39%), Positives = 53/102 (51%)
Query: 213 LYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQVYSRDILSA 272
LY GM + FAWH ED L+SINY H G PK+WY VP H + E +A+ +
Sbjct: 162 LYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLESLAKGF-----FPGS 216
Query: 273 AGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVIT 314
A AF + K T+ P +L G+ K Q+ GEF+ T
Sbjct: 217 AQSCEAF--LRHKMTLISPLMLKKYGIPFDKVTQEAGEFMFT 256
Score = 58 (25.5 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 31/152 (20%), Positives = 67/152 (44%)
Query: 38 YYPTLQEFDDPFIYLQKIAPE-ASQFGICKIISPVKASVSAADVLKKEIKGFEFGTYRQP 96
+YPT++EF + Y+ I + A + G+ K++ P + A+ +I P
Sbjct: 17 FYPTVEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKPRAS---YDDIDDLVI-----P 68
Query: 97 LRLPKWNANDTGVF--FSGERKH-TYDTFESEAIKMLKRQSPRLGDLPPSYVEKKFWLEM 153
+ + +G+F ++ ++K T F A K +PR + +E+K+W +
Sbjct: 69 APIQQLVTGQSGLFTQYNIQKKAMTVREFRKIA-NSDKYCTPRYSEFEE--LERKYWKNL 125
Query: 154 THGRKGTVEYGVNIEGSAFSSDPND-QLGKCK 184
T YG ++ G+ + ++ +G+ +
Sbjct: 126 TFNPP---IYGADVNGTLYEQHVDEWNIGRLR 154
>UNIPROTKB|I3LVJ1 [details] [associations]
symbol:KDM4A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051864 "histone demethylase activity (H3-K36
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0035064 "methylated
histone residue binding" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 GO:GO:0005737
GO:GO:0005813 GO:GO:0045892 GO:GO:0005730 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 OMA:KRTAGCC
Ensembl:ENSSSCT00000026209 Uniprot:I3LVJ1
Length = 916
Score = 173 (66.0 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 40/102 (39%), Positives = 53/102 (51%)
Query: 213 LYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQVYSRDILSA 272
LY GM + FAWH ED L+SINY H G PK+WY VP H + E +A+ +
Sbjct: 162 LYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLESLAKGF-----FPGS 216
Query: 273 AGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVIT 314
A AF + K T+ P +L G+ K Q+ GEF+ T
Sbjct: 217 AQSCEAF--LRHKMTLISPLMLKKYGIPFDKVTQEAGEFMFT 256
Score = 58 (25.5 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 31/152 (20%), Positives = 67/152 (44%)
Query: 38 YYPTLQEFDDPFIYLQKIAPE-ASQFGICKIISPVKASVSAADVLKKEIKGFEFGTYRQP 96
+YPT++EF + Y+ I + A + G+ K++ P + A+ +I P
Sbjct: 17 FYPTVEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKPRAS---YDDIDDLVI-----P 68
Query: 97 LRLPKWNANDTGVF--FSGERKH-TYDTFESEAIKMLKRQSPRLGDLPPSYVEKKFWLEM 153
+ + +G+F ++ ++K T F A K +PR + +E+K+W +
Sbjct: 69 APIQQLVTGQSGLFTQYNIQKKAMTVREFRKIA-NSDKYCTPRYSEFEE--LERKYWKNL 125
Query: 154 THGRKGTVEYGVNIEGSAFSSDPND-QLGKCK 184
T YG ++ G+ + ++ +G+ +
Sbjct: 126 TFNPP---IYGADVNGTLYEQHVDEWNIGRLR 154
>SGD|S000004788 [details] [associations]
symbol:ECM5 "Non-essential protein of unknown function"
species:4932 "Saccharomyces cerevisiae" [GO:0070211 "Snt2C complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
SGD:S000004788 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
EMBL:BK006946 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 EMBL:Z49808 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 PIR:S55123
RefSeq:NP_013901.1 ProteinModelPortal:Q03214 SMR:Q03214
DIP:DIP-6678N IntAct:Q03214 MINT:MINT-631320 STRING:Q03214
PaxDb:Q03214 PeptideAtlas:Q03214 PRIDE:Q03214 EnsemblFungi:YMR176W
GeneID:855214 KEGG:sce:YMR176W CYGD:YMR176w eggNOG:KOG1246
OrthoDB:EOG4Z39NV NextBio:978720 Genevestigator:Q03214
GermOnline:YMR176W GO:GO:0070211 InterPro:IPR003349 PROSITE:PS51183
Uniprot:Q03214
Length = 1411
Score = 128 (50.1 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 24/79 (30%), Positives = 39/79 (49%)
Query: 288 IFPPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEA 347
IF P +L NG+ +YK Q+ G ++ FP+ + +GF + FA W F EA
Sbjct: 631 IFEPNFILANGIKLYKTTQEQGSYIFKFPKAFTCSIGSGFYLSQNAKFAPSSWLRFSSEA 690
Query: 348 GKRYARLHKMVILPYQELL 366
K +++ + L +LL
Sbjct: 691 AKWTSKMGFLPGLDVNQLL 709
Score = 109 (43.4 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 26/81 (32%), Positives = 42/81 (51%)
Query: 184 KWHLKTLRGLPQSIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPK 243
+W+L + S+ + L+ + T IGMLFS W V DH+L SI+++H G+ K
Sbjct: 481 QWNLDNIPLNELSLLQHLDLDMANFTRTTYDIGMLFSCQGWSVSDHFLPSIDFNHLGSTK 540
Query: 244 TWYGVPGHHALQFEK-VARNQ 263
Y + +FE +AR +
Sbjct: 541 LVYSIAPKDMEKFEALIARGK 561
>POMBASE|SPBC83.07 [details] [associations]
symbol:jmj3 "Lid2 complex subunit, histone demethylase
H3-K36 specific Jmj3" species:4896 "Schizosaccharomyces pombe"
[GO:0000790 "nuclear chromatin" evidence=IC] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=IC] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IC]
[GO:0016577 "histone demethylation" evidence=ISO] [GO:0048189 "Lid2
complex" evidence=IDA] [GO:0051864 "histone demethylase activity
(H3-K36 specific)" evidence=ISO] InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00558 PomBase:SPBC83.07 GO:GO:0005829
EMBL:CU329671 GO:GO:0006357 GO:GO:0006351 GenomeReviews:CU329671_GR
GO:GO:0006338 GO:GO:0000790 GO:GO:0048189 InterPro:IPR003349
PROSITE:PS51183 SMART:SM00545 GO:GO:0051864 PIR:T40696
RefSeq:NP_595639.1 ProteinModelPortal:O94691 STRING:O94691
EnsemblFungi:SPBC83.07.1 GeneID:2540780 KEGG:spo:SPBC83.07
eggNOG:NOG317950 OrthoDB:EOG4WQ4CQ NextBio:20801898 Uniprot:O94691
Length = 752
Score = 157 (60.3 bits), Expect = 7.9e-10, Sum P(3) = 7.9e-10
Identities = 34/114 (29%), Positives = 53/114 (46%)
Query: 213 LYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQVYSRDILSA 272
L+ G + W VE LH++ H G+ WY +P H+ F+K+A L+
Sbjct: 201 LFAGKWKTTLPWRVESPELHAVQVHLGGSSLQWYVIPSAHSESFKKLAGK-------LAQ 253
Query: 273 AGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFSNG 326
+ + + +FPP L+ NG+ Y V K E +ITFP +H+ F G
Sbjct: 254 DEHWRCSDFLLHQNILFPPSTLVQNGIVTYSTVLKQDELLITFPGTHHSAFCLG 307
Score = 54 (24.1 bits), Expect = 7.9e-10, Sum P(3) = 7.9e-10
Identities = 11/47 (23%), Positives = 25/47 (53%)
Query: 25 DVDWTHKISD-CPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISP 70
++D+ + SD P P + EF D +++++ ++G K++ P
Sbjct: 23 EIDYHIEGSDGIPVVEPKISEFVDMESFIRRVERLGKKYGAIKVVRP 69
Score = 52 (23.4 bits), Expect = 7.9e-10, Sum P(3) = 7.9e-10
Identities = 22/59 (37%), Positives = 29/59 (49%)
Query: 126 AIKMLKRQS---PRLGD-LPPSYVEKKFWLEMTHGRKGTV-EYGVNIE-GSAFSSDPND 178
AIK+++ S P D + PS V+ WLE RKG E +I+ GSA P D
Sbjct: 63 AIKVVRPSSVLNPWNEDTMKPSDVKMDLWLERMVRRKGEYFEIQSDIDHGSAGPKKPTD 121
>UNIPROTKB|F5H590 [details] [associations]
symbol:JARID2 "Protein Jumonji" species:9606 "Homo sapiens"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001606 InterPro:IPR003347 Pfam:PF01388
Pfam:PF02373 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501
SMART:SM00558 GO:GO:0003677 GO:GO:0005622 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:AL136162 EMBL:AL021938 HGNC:HGNC:6196
IPI:IPI01018952 ProteinModelPortal:F5H590 SMR:F5H590 PRIDE:F5H590
Ensembl:ENST00000541660 UCSC:uc011diu.1 ArrayExpress:F5H590
Bgee:F5H590 Uniprot:F5H590
Length = 960
Score = 128 (50.1 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 34/104 (32%), Positives = 51/104 (49%)
Query: 142 PSYVEKKFW-LEMTHGRKGTVEYG---VNIEGSAFSSDPNDQLGKCKWHLKTLRGLPQSI 197
P+ +E+++W L V G N GS F ++ + W+L L SI
Sbjct: 805 PAEIEQEYWRLVEEKDCHVAVHCGKVDTNTHGSGFPVGKSEPFSRHGWNLTVLPNNTGSI 864
Query: 198 FRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGA 241
R L +PG+T P L IGM+FS W + ++L I+Y H+GA
Sbjct: 865 LRHLG-AVPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGA 907
Score = 94 (38.1 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 14/43 (32%), Positives = 26/43 (60%)
Query: 28 WTHKISDCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISP 70
W + + P P+ +EF DP IY++ + + +FG+C++I P
Sbjct: 513 WA-AMDEIPVLRPSAKEFHDPLIYIESVRAQVEKFGMCRVIPP 554
>UNIPROTKB|G4MMV6 [details] [associations]
symbol:MGG_02045 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00558 EMBL:CM001231
RefSeq:XP_003708798.1 EnsemblFungi:MGG_02045T0 GeneID:2681322
KEGG:mgr:MGG_02045 Uniprot:G4MMV6
Length = 1104
Score = 156 (60.0 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 42/133 (31%), Positives = 63/133 (47%)
Query: 205 IPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGV-PGHHALQFEKVARNQ 263
IPG+ P Y G F+ FAWH ED L +INY H G K W+ PG F+K
Sbjct: 656 IPGLHTPTCYRGTPFAPFAWHHEDFELGAINYLHYGQ-KIWFVTHPGF----FDKATAT- 709
Query: 264 VYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGF 323
++ L+ + F + + + L + + +Q+ G+ V+ +PR YH+GF
Sbjct: 710 --FQEALNIDQDHSQF--LRHEAVHGGVQYLRNKDIPTIGFMQEAGQIVVVYPRAYHSGF 765
Query: 324 SNGFNCGEAVNFA 336
EAVN+A
Sbjct: 766 GATATVAEAVNYA 778
>UNIPROTKB|F5GZR8 [details] [associations]
symbol:KDM5A "Lysine-specific demethylase 5A" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 GO:GO:0003677 GO:GO:0005622 Gene3D:1.10.150.60
SUPFAM:SSF46774 EMBL:AC005844 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 SMART:SM00545 EMBL:AC007406 HGNC:HGNC:9886
ChiTaRS:KDM5A IPI:IPI01011614 ProteinModelPortal:F5GZR8 SMR:F5GZR8
Ensembl:ENST00000543507 ArrayExpress:F5GZR8 Bgee:F5GZR8
Uniprot:F5GZR8
Length = 131
Score = 96 (38.9 bits), Expect = 0.00053, P = 0.00053
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 34 DCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISPVKASVSAADV-----LKKEIKGF 88
+CP + P+ +EF DP ++ +I P A + GICKI P +S+ E+K F
Sbjct: 18 ECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPPKFWQISSVSKDWQPPFACEVKSF 77
Query: 89 EF 90
F
Sbjct: 78 RF 79
>UNIPROTKB|C9JGA3 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 PROSITE:PS50016
PROSITE:PS51011 SMART:SM00249 SMART:SM00501 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:AC010889 HGNC:HGNC:11115 ChiTaRS:KDM5D
IPI:IPI00644852 ProteinModelPortal:C9JGA3 SMR:C9JGA3 STRING:C9JGA3
Ensembl:ENST00000447300 HOGENOM:HOG000174636 ArrayExpress:C9JGA3
Bgee:C9JGA3 Uniprot:C9JGA3
Length = 425
Score = 98 (39.6 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 34 DCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISP 70
+CP + P+ EF DP Y+ KI P A + GICKI P
Sbjct: 13 ECPVFEPSWAEFQDPLGYIAKIRPIAEKSGICKIRPP 49
Score = 63 (27.2 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 15/36 (41%), Positives = 19/36 (52%)
Query: 140 LPPSYVEKKFW-LEMTHGRKGTVEYGVNIEGSAFSS 174
+P VEK+FW L + TVEYG +I F S
Sbjct: 361 VPTELVEKEFWRLVSSIEEDVTVEYGADIHSKEFGS 396
>UNIPROTKB|F5GZ99 [details] [associations]
symbol:KDM5A "Lysine-specific demethylase 5A" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 GO:GO:0003677 GO:GO:0005622 Gene3D:1.10.150.60
SUPFAM:SSF46774 EMBL:AC005844 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 SMART:SM00545 EMBL:AC007406 HGNC:HGNC:9886
ChiTaRS:KDM5A IPI:IPI00872073 ProteinModelPortal:F5GZ99 SMR:F5GZ99
Ensembl:ENST00000535014 ArrayExpress:F5GZ99 Bgee:F5GZ99
Uniprot:F5GZ99
Length = 126
Score = 94 (38.1 bits), Expect = 0.00087, P = 0.00087
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 34 DCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISP 70
+CP + P+ +EF DP ++ +I P A + GICKI P
Sbjct: 18 ECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPP 54
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.138 0.437 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 499 486 0.00081 119 3 11 22 0.50 33
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 119
No. of states in DFA: 619 (66 KB)
Total size of DFA: 329 KB (2167 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 42.75u 0.16s 42.91t Elapsed: 00:00:02
Total cpu time: 42.79u 0.16s 42.95t Elapsed: 00:00:02
Start: Thu May 9 22:38:56 2013 End: Thu May 9 22:38:58 2013
WARNINGS ISSUED: 1