Query 043353
Match_columns 499
No_of_seqs 247 out of 713
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 06:46:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043353.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043353hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dxt_A JMJC domain-containing 100.0 7.6E-90 2.6E-94 701.0 17.3 312 30-369 13-328 (354)
2 2ox0_A JMJC domain-containing 100.0 2.3E-89 7.9E-94 705.9 19.4 314 31-369 32-346 (381)
3 3opt_A DNA damage-responsive t 100.0 9.6E-86 3.3E-90 674.0 15.4 309 32-366 11-368 (373)
4 3avr_A Lysine-specific demethy 100.0 3.4E-61 1.2E-65 514.2 20.7 296 160-478 211-523 (531)
5 4ask_A Lysine-specific demethy 100.0 2.2E-58 7.4E-63 485.0 25.7 276 186-479 207-499 (510)
6 2xxz_A Lysine-specific demethy 100.0 3.3E-46 1.1E-50 378.8 12.5 154 186-355 173-331 (332)
7 3pua_A GRC5, PHD finger protei 98.0 4.8E-05 1.6E-09 79.0 12.5 139 211-372 176-317 (392)
8 3k3o_A PHF8, PHD finger protei 98.0 4.6E-05 1.6E-09 78.7 12.2 139 211-372 149-290 (371)
9 3kv4_A PHD finger protein 8; e 97.9 6E-05 2E-09 79.8 13.1 139 211-372 233-374 (447)
10 3kv9_A JMJC domain-containing 97.9 7.5E-05 2.6E-09 77.8 12.1 139 211-372 177-318 (397)
11 3kv5_D JMJC domain-containing 97.9 0.0001 3.5E-09 79.0 13.1 139 211-372 268-409 (488)
12 2ypd_A Probable JMJC domain-co 97.8 3.9E-05 1.3E-09 79.0 7.7 97 243-343 234-334 (392)
13 2yu1_A JMJC domain-containing 97.7 0.00036 1.2E-08 73.9 14.4 138 211-371 198-338 (451)
14 3k2o_A Bifunctional arginine d 97.5 0.00034 1.2E-08 71.5 10.5 122 210-343 173-297 (336)
15 4gjz_A Lysine-specific demethy 97.4 0.00049 1.7E-08 65.0 9.2 111 210-336 125-235 (235)
16 3pur_A Lysine-specific demethy 97.3 0.00087 3E-08 71.8 10.4 139 210-371 297-442 (528)
17 3d8c_A Hypoxia-inducible facto 96.5 0.012 4E-07 60.3 10.5 115 208-337 182-297 (349)
18 3al5_A HTYW5, JMJC domain-cont 95.9 0.034 1.1E-06 56.5 10.5 109 209-338 167-276 (338)
19 1vrb_A Putative asparaginyl hy 85.9 2.5 8.6E-05 42.8 9.1 120 211-349 143-265 (342)
20 4diq_A Lysine-specific demethy 74.6 11 0.00037 40.1 9.5 106 210-345 165-274 (489)
21 2xdv_A MYC-induced nuclear ant 50.3 63 0.0021 33.7 9.8 105 208-346 138-247 (442)
22 1wfh_A Zinc finger (AN1-like) 47.4 9.9 0.00034 29.2 2.2 40 415-456 14-53 (64)
23 1wg2_A Zinc finger (AN1-like) 43.4 12 0.00042 28.7 2.2 40 415-456 14-53 (64)
24 1wfp_A Zinc finger (AN1-like) 39.3 19 0.00066 28.4 2.8 39 414-454 23-61 (74)
25 2pfw_A Cupin 2, conserved barr 31.9 60 0.0021 26.0 5.0 24 303-326 73-96 (116)
26 2gu9_A Tetracenomycin polyketi 31.3 55 0.0019 25.7 4.6 38 303-340 63-100 (113)
27 1vr3_A Acireductone dioxygenas 30.3 44 0.0015 30.9 4.2 46 301-346 126-173 (191)
28 1wff_A Riken cDNA 2810002D23 p 29.8 28 0.00096 28.2 2.4 38 415-454 24-62 (85)
29 1wfl_A Zinc finger protein 216 27.3 33 0.0011 27.1 2.3 38 415-454 24-61 (74)
30 2b8m_A Hypothetical protein MJ 25.7 62 0.0021 26.1 4.0 30 305-334 69-98 (117)
31 1x82_A Glucose-6-phosphate iso 23.3 92 0.0031 28.1 5.0 40 301-340 118-157 (190)
32 2y0o_A Probable D-lyxose ketol 23.0 66 0.0023 29.3 3.9 24 301-324 118-141 (175)
33 3h8u_A Uncharacterized conserv 22.5 50 0.0017 27.0 2.8 32 304-335 81-112 (125)
34 1v70_A Probable antibiotics sy 22.0 98 0.0034 23.6 4.4 32 303-334 68-99 (105)
35 1zrr_A E-2/E-2' protein; nicke 20.3 70 0.0024 29.1 3.5 43 301-343 121-165 (179)
36 3ibm_A Cupin 2, conserved barr 20.2 67 0.0023 28.4 3.3 24 303-326 95-118 (167)
No 1
>3dxt_A JMJC domain-containing histone demethylation PROT; JMJD2D, histone demethylase, H3K9, jumonji domain-CONT protein 2D, oxidoreductase; 1.80A {Homo sapiens} PDB: 3dxu_A* 4hon_A* 4hoo_A 2w2i_A*
Probab=100.00 E-value=7.6e-90 Score=700.99 Aligned_cols=312 Identities=30% Similarity=0.523 Sum_probs=274.0
Q ss_pred CCCCCCCeeeCChhhhcCHHHHHHhhcc-ccccCCeeEEcCCCCccccchhhhcccccCceeeeeccCCCCCCccCCCCc
Q 043353 30 HKISDCPAYYPTLQEFDDPFIYLQKIAP-EASQFGICKIISPVKASVSAADVLKKEIKGFEFGTYRQPLRLPKWNANDTG 108 (499)
Q Consensus 30 ~~~~~~Pvf~PT~eEF~dp~~YI~~i~~-~a~~~GI~KIVPP~~w~~p~~~~l~~~~~~~~f~tr~Q~i~~~~~~~~~~~ 108 (499)
....++||||||+|||+||.+||++|++ +|+++||||||||++|+++... .+.+++.+.+++|++. .+..|
T Consensus 13 ~~~~~ipvF~PT~eEF~df~~Yi~~ie~~Ga~~~Gi~KIIPP~~W~~r~~~---~~~~~~~i~~pi~q~~-----~g~~G 84 (354)
T 3dxt_A 13 NPNCNIMIFHPTKEEFNDFDKYIAYMESQGAHRAGLAKIIPPKEWKARETY---DNISEILIATPLQQVA-----SGRAG 84 (354)
T ss_dssp CTTCCCEEECCCTTGGGCHHHHHHHHHHTTGGGGSEEEECCCTTCCSSSCS---TTCTTCEESSCEEEEE-----EEETT
T ss_pred CCCCCcceecCCHHHHhCHHHHHHHHHhccccccCcccccCcccccCcccc---cchhcccccCCceeee-----cCCCc
Confidence 3456789999999999999999999986 5789999999999999998642 3456788888887653 23334
Q ss_pred e---eeecCcccCHHHHHHHHHHHHHhhCCCCCCCChhHHHHHhhhhccCCCccceeecccCCCCCCCCCCCCCcCCCCc
Q 043353 109 V---FFSGERKHTYDTFESEAIKMLKRQSPRLGDLPPSYVEKKFWLEMTHGRKGTVEYGVNIEGSAFSSDPNDQLGKCKW 185 (499)
Q Consensus 109 ~---~~~~~~~~tl~~f~~~A~~~~~~~~~~~~~~~~~~vE~efW~~v~~~~~~~v~YgaD~~gS~f~~~~~~~~~~~~W 185 (499)
+ ++++++.||+.+|+++|+. .+|+.+...+.++||++|||.+..+ +|+||||++||+|+.+ .++|
T Consensus 85 ~~~~~~~~~k~~t~~~f~~~a~~---~~~~~p~~~~~~~lE~~fW~~~~~~---~p~YgaD~~gS~F~~~------~~~W 152 (354)
T 3dxt_A 85 VFTQYHKKKKAMTVGEYRHLANS---KKYQTPPHQNFEDLERKYWKNRIYN---SPIYGADISGSLFDEN------TKQW 152 (354)
T ss_dssp EEEEEEEECCCEEHHHHHHHHTS---TTTSCCCCSSHHHHHHHHHHHGGGC---CCEEEEEEECCCSCTT------CCSS
T ss_pred eEEEeeeccCccCHHHHHHHHhh---hhccCCCCCCHHHHHHHHhhhcccC---CceeeecCCCcccCCC------cchh
Confidence 4 4678899999999999984 5677777888999999999999874 6899999999999863 5799
Q ss_pred ccCCCCCCCCcccccccCCCCCCccceEEeeccccccceeecCCCceeEEEEeeCCCceEEeeCCchHHHHHHHHHhhcc
Q 043353 186 HLKTLRGLPQSIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQVY 265 (499)
Q Consensus 186 NL~nlp~~~~slL~~~~~~i~Gv~~p~lyiGm~~S~f~WH~ED~~l~SiNy~H~GapK~WY~VP~~~~~kfe~l~~~~~~ 265 (499)
||+|||.+.++||++++.+|+|||+||||+||+||+||||+||++||||||+|+|+||+||+||++++++||++|++.++
T Consensus 153 NL~~L~~~~~~Ll~~~~~~I~GVntP~LYiGm~~Stf~WH~ED~~L~SINYlH~GapK~WY~VP~~~~~kfE~l~k~~~p 232 (354)
T 3dxt_A 153 NLGHLGTIQDLLEKECGVVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHLGEPKTWYVVPPEHGQRLERLARELFP 232 (354)
T ss_dssp CTTSSCCHHHHHHHHHCCCCCCCCCCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHHHHHHSH
T ss_pred hhhhccchhHHHHhhcCCCCCCccceeeeeccccCCCcceecCCcceEEEEEecCCceEEEEeCHHHHHHHHHHHHHhCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999874
Q ss_pred chhhhhhcCCCChhhhhcccccccChhhHhhCCCceEEeeeCCCcEEEEcCCceeeeeecccceeeeecccccccccchH
Q 043353 266 SRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGE 345 (499)
Q Consensus 266 ~~~l~~~~~~~~~~~~l~~~~~~~~P~~L~~~gIpv~r~~Q~pGefVvtfP~aYH~gfn~Gfn~aEavNfa~~~Wl~~g~ 345 (499)
+.+ ..|++||+|++++++|+.|+++||||++++|+|||||||||||||+|||+||||+||||||+++|+++|+
T Consensus 233 --~~~-----~~c~~fL~h~~~lisP~~L~~~GIpv~~~vQ~pGEfViTfP~aYH~gfn~Gfn~aEAvNFA~~~Wl~~g~ 305 (354)
T 3dxt_A 233 --GSS-----RGCGAFLRHKVALISPTVLKENGIPFNRITQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYGK 305 (354)
T ss_dssp --HHH-----HHCTTGGGGCCEEECHHHHHHTTCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEECCGGGHHHHH
T ss_pred --hhh-----hhcHHHHhcCcccCCHHHHHHCCCceEEEEeCCCcEEEECCCceEEEeeccccHhHhhccCcHHHHHhhh
Confidence 333 2368999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCcCHHHHHHHH
Q 043353 346 EAGKRYARLHKMVILPYQELLFKE 369 (499)
Q Consensus 346 ~a~~~y~~~~~~~~~s~~~Ll~~~ 369 (499)
.|.+..+... ...|+||.++..+
T Consensus 306 ~A~~C~C~~~-~v~i~~d~~~~~~ 328 (354)
T 3dxt_A 306 MASQCSCGEA-RVTFSMDAFVRIL 328 (354)
T ss_dssp HCCCCCSSSC-CCCHHHHHHHHHH
T ss_pred hcccccccCc-cceecHHHHHHhh
Confidence 9976544433 3458888776543
No 2
>2ox0_A JMJC domain-containing histone demethylation PROT; double-stranded beta helix, demethylase, oxygenase, SGC, STR genomics, structural genomics consortium, oxidoreductase; HET: MLY ALY OGA; 1.95A {Homo sapiens} PDB: 2oq7_A* 2os2_A* 2ot7_A* 2oq6_A* 2vd7_A* 2ybk_A* 2ybp_A* 2ybs_A* 3njy_A* 3pdq_A* 3u4s_A* 2p5b_A* 2q8c_A* 2q8d_A* 2q8e_A* 2gp5_A* 2gp3_A* 2wwj_A* 2pxj_A* 2xml_A*
Probab=100.00 E-value=2.3e-89 Score=705.86 Aligned_cols=314 Identities=29% Similarity=0.498 Sum_probs=274.3
Q ss_pred CCCCCCeeeCChhhhcCHHHHHHhhcc-ccccCCeeEEcCCCCccccchhhhcccccCceeeeeccCCCCCCccCCCCce
Q 043353 31 KISDCPAYYPTLQEFDDPFIYLQKIAP-EASQFGICKIISPVKASVSAADVLKKEIKGFEFGTYRQPLRLPKWNANDTGV 109 (499)
Q Consensus 31 ~~~~~Pvf~PT~eEF~dp~~YI~~i~~-~a~~~GI~KIVPP~~w~~p~~~~l~~~~~~~~f~tr~Q~i~~~~~~~~~~~~ 109 (499)
.-.+|||||||+|||+||.+||++|++ +|++|||||||||++|+||+.. .+.++++|.+++|++...+ .+-..+
T Consensus 32 ~~~~iPVF~PT~EEF~Df~~YI~kIe~~gA~~~GI~KIIPP~~W~p~~~~---~~~~~~~i~~piqQ~~~g~--~g~~~~ 106 (381)
T 2ox0_A 32 PSARIMTFYPTMEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKPRASY---DDIDDLVIPAPIQQLVTGQ--SGLFTQ 106 (381)
T ss_dssp TTCCCEEECCCHHHHSCHHHHHHHHHHTTGGGGSEEEECCCTTCCSCSCS---TTCTTCEESSCEEEEEEEE--TTEEEE
T ss_pred CCCCCceEcCCHHHHhCHHHHHHHHHhccccccCceeecCCccCCCcccc---chhhhcccCCcceeeecCC--Cccccc
Confidence 345789999999999999999999998 5889999999999999998753 3456788998888653211 111223
Q ss_pred eeecCcccCHHHHHHHHHHHHHhhCCCCCCCChhHHHHHhhhhccCCCccceeecccCCCCCCCCCCCCCcCCCCcccCC
Q 043353 110 FFSGERKHTYDTFESEAIKMLKRQSPRLGDLPPSYVEKKFWLEMTHGRKGTVEYGVNIEGSAFSSDPNDQLGKCKWHLKT 189 (499)
Q Consensus 110 ~~~~~~~~tl~~f~~~A~~~~~~~~~~~~~~~~~~vE~efW~~v~~~~~~~v~YgaD~~gS~f~~~~~~~~~~~~WNL~n 189 (499)
+.++++.||+++|+++|+. .+++.+...+.++||++|||+|.. ++|+||+|++||+|+.+ .++|||+|
T Consensus 107 ~~~~~k~~tl~~f~~~a~~---~~~~~p~~~~~~~lE~~fWr~v~~---~~~~YgaD~~gS~f~~~------~~~WNL~~ 174 (381)
T 2ox0_A 107 YNIQKKAMTVREFRKIANS---DKYCTPRYSEFEELERKYWKNLTF---NPPIYGADVNGTLYEKH------VDEWNIGR 174 (381)
T ss_dssp EEEECCCEEHHHHHHHHHS---TTTSCCCCSSHHHHHHHHHHHTTS---SCCEEEEEEECCCSCTT------CCSSCTTC
T ss_pred ccccccccCHHHHHHHhcc---cccCCCccCCHHHHHHHHHhhCCc---CCceeecCCCcccCCCC------CCCCchhh
Confidence 5678999999999999984 346666677889999999999986 36899999999999863 58999999
Q ss_pred CCCCCCcccccccCCCCCCccceEEeeccccccceeecCCCceeEEEEeeCCCceEEeeCCchHHHHHHHHHhhccchhh
Q 043353 190 LRGLPQSIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQVYSRDI 269 (499)
Q Consensus 190 lp~~~~slL~~~~~~i~Gv~~p~lyiGm~~S~f~WH~ED~~l~SiNy~H~GapK~WY~VP~~~~~kfe~l~~~~~~~~~l 269 (499)
||.+.++||++.+.+|+|||+||||+||+||+||||+||++||||||+|+|+||+||+||++++++||++|++.++ ++
T Consensus 175 Lp~ll~~ll~~~~~~I~GVn~P~LYiGm~~S~f~WH~ED~~L~SINYlH~GapK~WY~VP~~~~~kfE~l~~~~~P--~~ 252 (381)
T 2ox0_A 175 LRTILDLVEKESGITIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAKGFFP--GS 252 (381)
T ss_dssp CCCGGGHHHHHHCCCCBTTTSCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHHHHHHSH--HH
T ss_pred hhhHHHHHHHhcCCCCCCcccceEEeeccccCcCceecCCcceeeEEeecCCceEEEecCHHHHHHHHHHHHHhCh--hh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999874 44
Q ss_pred hhhcCCCChhhhhcccccccChhhHhhCCCceEEeeeCCCcEEEEcCCceeeeeecccceeeeecccccccccchHHHHH
Q 043353 270 LSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGK 349 (499)
Q Consensus 270 ~~~~~~~~~~~~l~~~~~~~~P~~L~~~gIpv~r~~Q~pGefVvtfP~aYH~gfn~Gfn~aEavNfa~~~Wl~~g~~a~~ 349 (499)
+. .|++||+|++++++|+.|+++||||+|++|+|||||||||||||+|||+||||+||||||+++|+++|..|.+
T Consensus 253 ~~-----~~~~~L~h~~~~isP~~L~~~GIpv~r~vQ~pGEfViTfP~aYH~gfn~GfN~aEAvNFA~~~Wl~~g~~a~~ 327 (381)
T 2ox0_A 253 AQ-----SCEAFLRHKMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYGKQAVL 327 (381)
T ss_dssp HH-----HCTTGGGGSCEEECHHHHHHTTCCCEEEEECTTCEEEECTTCEEEEEECSSEEEEEEEECCTTHHHHHHHCCC
T ss_pred hh-----cchHHhhccccccCHHHHHHCCCceEEEEecCCCEEEECCCcEEEeecCcccHHHHhccCcHHHHHHhHhhhh
Confidence 42 3689999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred HHHhcCCCCCcCHHHHHHHH
Q 043353 350 RYARLHKMVILPYQELLFKE 369 (499)
Q Consensus 350 ~y~~~~~~~~~s~~~Ll~~~ 369 (499)
+.+.. ..-.|+|+.|+-++
T Consensus 328 c~c~~-~~v~i~~d~~~~~~ 346 (381)
T 2ox0_A 328 CSCRK-DMVKISMDVFVRKF 346 (381)
T ss_dssp CCSST-TCCCCCCHHHHHHH
T ss_pred ccccC-CceeecHHHHHHHh
Confidence 54433 34457888886654
No 3
>3opt_A DNA damage-responsive transcriptional repressor R; RPH1, histone demethylase, catalytic core, oxidoreductase; HET: DNA AKG; 2.20A {Saccharomyces cerevisiae} PDB: 3opw_A*
Probab=100.00 E-value=9.6e-86 Score=673.96 Aligned_cols=309 Identities=29% Similarity=0.569 Sum_probs=225.0
Q ss_pred CCCCCeeeCChhhhcCHHHHHHhhccccccCCeeEEcCCCCccccchhh-hcccccCceeeeeccCCCCCCccCCCCcee
Q 043353 32 ISDCPAYYPTLQEFDDPFIYLQKIAPEASQFGICKIISPVKASVSAADV-LKKEIKGFEFGTYRQPLRLPKWNANDTGVF 110 (499)
Q Consensus 32 ~~~~Pvf~PT~eEF~dp~~YI~~i~~~a~~~GI~KIVPP~~w~~p~~~~-l~~~~~~~~f~tr~Q~i~~~~~~~~~~~~~ 110 (499)
.++|||||||+|||+||.+||++|++.++++||||||||++|+++.... .....+++++.+++|+.- .+..|+|
T Consensus 11 ~~~~pVF~PT~eeF~dF~~yi~~i~~~g~~~Gi~KVIPPkeW~~~~~~~~~~~~l~~~~i~~PI~Q~~-----~G~~G~~ 85 (373)
T 3opt_A 11 VGGVPVFKPTYEQFEDFYAYCKAINKYGMKSGVVKVIPPKEWKDKLDLPYSAETLQKIKIKSPIQQHI-----SGNKGLF 85 (373)
T ss_dssp ESSSEEECCCHHHHTCHHHHHHTTHHHHTTSSEEEECCCHHHHTTSCSSCCHHHHHHCEEESCEEEEE-----EESSSEE
T ss_pred cCCCCeeCCCHHHHhCHHHHHHHHHHhccccCeEEEeCchhhhhcccCCCcHhHHhcCcCCCCcEEEe-----cCCCceE
Confidence 4779999999999999999999999999999999999999999885311 112345678888776532 2345566
Q ss_pred e----ecCcccCHHHHHHHHHHH---------------------------------------HHhhCCC-CCCC----Ch
Q 043353 111 F----SGERKHTYDTFESEAIKM---------------------------------------LKRQSPR-LGDL----PP 142 (499)
Q Consensus 111 ~----~~~~~~tl~~f~~~A~~~---------------------------------------~~~~~~~-~~~~----~~ 142 (499)
. ...|+|++.+|+.+|++. |...|.. ..+. ..
T Consensus 86 ~~~nie~~r~~~~~q~k~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (373)
T 3opt_A 86 MVQNVEKNKTYNIIQWKDLSKDYVPPEDPKARRNSRKGSVSKSTKLKLKNFESSFNIDDFEQFRTEYTIDLSDFQNTERL 165 (373)
T ss_dssp EEEEEECSCEEEHHHHHHHTTSSCCCCC------------------------CCCCHHHHHHHTTTSSCCCTTSSCHHHH
T ss_pred EEeeeccccccCHHHHHHhhhhcCCCcccccccccccccccccccccccccccccchHHHHHHHHhhccchhhccCcchH
Confidence 3 245788998888775310 0011110 0111 13
Q ss_pred hHHHHHhhhhccCCCccceeecccCCCCCCCCCCCCCcCCCCcccCCCCCCCCcccccccCCCCCCccceEEeecccccc
Q 043353 143 SYVEKKFWLEMTHGRKGTVEYGVNIEGSAFSSDPNDQLGKCKWHLKTLRGLPQSIFRFLEHIIPGITDPMLYIGMLFSMF 222 (499)
Q Consensus 143 ~~vE~efW~~v~~~~~~~v~YgaD~~gS~f~~~~~~~~~~~~WNL~nlp~~~~slL~~~~~~i~Gv~~p~lyiGm~~S~f 222 (499)
++||++||+.|..+ +|+||||++||+|+.+ .++|||+||| +||++++.+|+|||+||||+||+||+|
T Consensus 166 ~~lE~~yW~~~~~~---~p~YgaD~~GS~F~~~------~~~WNL~~Lp----~lL~~l~~~I~GVntP~LYvGm~~Stf 232 (373)
T 3opt_A 166 KFLEEYYWKTLNFT---TPMYGADTPGSIFPEG------LNVWNVAKLP----NILDHMETKVPGVNDSYLYAGLWKASF 232 (373)
T ss_dssp HHHHHHHHHTTTTS---CCEEEEEEECCCSCTT------CCSSCTTSCC------------------CCEEEEECTTCEE
T ss_pred HHHHHHHHHhccCC---CceEecCCCCCCcCCC------CCccChhhhh----hHHHHhcccCCCcchhheeeccccCCc
Confidence 58999999999874 6899999999999964 6899999999 589999999999999999999999999
Q ss_pred ceeecCCCceeEEEEeeCCCceEEeeCCchHHHHHHHHHhhccchhhhhhcCCCChhhhhcccccccChhhHhhCCCceE
Q 043353 223 AWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVY 302 (499)
Q Consensus 223 ~WH~ED~~l~SiNy~H~GapK~WY~VP~~~~~kfe~l~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~P~~L~~~gIpv~ 302 (499)
|||+||++||||||+|+|+||+||+||++++++||++|++.++ +.+ ..|++||+|++++++|+.|+++||||+
T Consensus 233 ~WH~ED~~L~SINYlH~GapK~WY~VP~~~~~kfE~l~k~~~p--~~~-----~~c~~fL~h~~~lisP~~L~~~GIpv~ 305 (373)
T 3opt_A 233 SWHLEDQDLYSINYIHFGAPKQWYSIPQEDRFKFYKFMQEQFP--EEA-----KNCPEFLRHKMFLASPKLLQENGIRCN 305 (373)
T ss_dssp EEECCGGGCEEEEEEEEESCEEEEECCGGGHHHHHHHHHHSSH--HHH-----SSCSSCTTTSCEEECHHHHHTTTCCCE
T ss_pred ceeecCCcceeEEEeecCCCeEEEEeCHHHHHHHHHHHHHhCh--hhh-----hhCHHHhhCCcccCCHHHHHhcCCceE
Confidence 9999999999999999999999999999999999999999874 343 357899999999999999999999999
Q ss_pred EeeeCCCcEEEEcCCceeeeeecccceeeeecccccccccchHHHHHHHHhcCCCCCcCHHHHH
Q 043353 303 KAVQKPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHKMVILPYQELL 366 (499)
Q Consensus 303 r~~Q~pGefVvtfP~aYH~gfn~Gfn~aEavNfa~~~Wl~~g~~a~~~y~~~~~~~~~s~~~Ll 366 (499)
+++|+|||||||||||||+|||+||||+||||||+++|+++|..|...... ...-.|++++|.
T Consensus 306 r~vQ~pGEfViTfP~aYH~gfn~Gfn~aEAvNFA~~~Wl~~g~~a~~C~C~-~d~v~i~~~~~~ 368 (373)
T 3opt_A 306 EIVHHEGEFMITYPYGYHAGFNYGYNLAESVNFALEEWLPIGKKAGKCHCI-SDSVEIDVKKLA 368 (373)
T ss_dssp EEEECTTCEEEECTTCCEEEEESSSEEEEEEEECCC----------------------------
T ss_pred EEEECCCCEEEECCCceEEEEecCccHHHHHccCcHHHHHhhccCccCccc-CCcceecHHHHH
Confidence 999999999999999999999999999999999999999999999865443 333456777664
No 4
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=100.00 E-value=3.4e-61 Score=514.21 Aligned_cols=296 Identities=18% Similarity=0.199 Sum_probs=247.7
Q ss_pred ceeecccCCCCCCCCCCCCCcCCCCcccCCCCC-----CCCcccccccCCCCCCccceEEeeccccccceeecCCCceeE
Q 043353 160 TVEYGVNIEGSAFSSDPNDQLGKCKWHLKTLRG-----LPQSIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSI 234 (499)
Q Consensus 160 ~v~YgaD~~gS~f~~~~~~~~~~~~WNL~nlp~-----~~~slL~~~~~~i~Gv~~p~lyiGm~~S~f~WH~ED~~l~Si 234 (499)
.+.||.+++-+. ...+...-|||++||. ..+|||+|++..|+|||+||||+||+||+||||+||++|+||
T Consensus 211 ~i~fgtNiDL~~-----~~~w~~ql~el~kLP~~lr~~~~gslL~~~~~~I~Gvn~pqLYig~~gS~t~~H~E~~~l~Si 285 (531)
T 3avr_A 211 TIKFGTNIDLSD-----DKKWKLQLHELTKLPAFVRVVSAGNLLSHVGHTILGMNTVQLYMKVPGSRTPGHQENNNFCSV 285 (531)
T ss_dssp EEEEEEEEECCC-----TTTTHHHHHHGGGSCGGGCSSCTTCGGGGSCSCCBTTSSCEEEEECTTCEEEEECCGGGCEEE
T ss_pred ccccccccCCCc-----hhhhHHHHHHHHhCCHHHcccCccchhhhcCCCCCCcChhheEeecCcccccceecCCcceee
Confidence 577888776431 1112234678999997 488999999999999999999999999999999999999999
Q ss_pred EEEeeCCCceEEeeCCchHHHHHHHHHhhccchhhhhhcCCCChhhhhcccccccChhhHhhCCCceEEeeeCCCcEEEE
Q 043353 235 NYHHSGAPKTWYGVPGHHALQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVIT 314 (499)
Q Consensus 235 Ny~H~GapK~WY~VP~~~~~kfe~l~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~P~~L~~~gIpv~r~~Q~pGefVvt 314 (499)
||||+|++|+||+||++++++||+++++.. .+++ +..++++|+.|.++||||||++|+|||||||
T Consensus 286 Nynhggg~~~Wy~VP~e~~~k~e~l~~k~~--------------~~~~-~~~~~~~p~~L~~~gIPvyr~vQkpGd~Vi~ 350 (531)
T 3avr_A 286 NINIGPGDCEWFVVPEGYWGVLNDFCEKNN--------------LNFL-MGSWWPNLEDLYEANVPVYRFIQRPGDLVWI 350 (531)
T ss_dssp EEEEEESCEEEEEECGGGHHHHHHHHHHTT--------------CCTT-TSCBCCCHHHHHHTTCCCEEEEECTTCEEEE
T ss_pred EeecCCCCeEEEEeCHHHHHHHHHHHHHcC--------------CChh-hceeecCHHHHHhCCCCeEEEEECCCCEEEE
Confidence 999999999999999999999999998752 1333 4567899999999999999999999999999
Q ss_pred cCCceeeeeecccceeeeecccccccccchHHHHHHHHh---cCCCCCcCHHHHHHHHHHcccCCC--hhhHHHHHHHHH
Q 043353 315 FPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYAR---LHKMVILPYQELLFKEVSEHEGTD--IPSSVKATVLHQ 389 (499)
Q Consensus 315 fP~aYH~gfn~Gfn~aEavNfa~~~Wl~~g~~a~~~y~~---~~~~~~~s~~~Ll~~~a~~~~~~~--~~~~~~~~~~~~ 389 (499)
||||||||+|+|||++||||||+++|++++. |.++|+. .+..++|||++|+|+||++....| +...++.+|.+.
T Consensus 351 ~PgayH~v~n~G~~~n~awN~a~~~~~q~~~-A~e~y~~Nk~~~~~sivp~~~L~wn~a~~~~~~d~~l~~~ik~~L~rs 429 (531)
T 3avr_A 351 NAGTVHWVQAIGWCNNIAWNVGPLTACQYKL-AVERYEWNKLQSVKSIVPMVHLSWNMARNIKVSDPKLFEMIKYCLLRT 429 (531)
T ss_dssp CTTCEEEEEESSSEEEEEEEECCSSHHHHHH-HHHHHHHHHHHTCCCSSCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
T ss_pred CCCceEEEEecceeeeeEEEeccCchHHHHH-HHHHHHHhhhccCCCCCCHHHHHHHHHhhhhcccHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999975 7777754 455899999999999999876555 335778888888
Q ss_pred HHHHHHHHHHhhcCCCCccccc--CccccccccccccceeeEEEeecc---CC--ceeecccccccccCCCCCCeEEEEE
Q 043353 390 IRSLNNALFCLNNLKMPFDYLQ--NSQGSFVCDLCKRDCYLAFTECKS---CQ--RYTCLFHEFKSRHCSCGYNRVVLLR 462 (499)
Q Consensus 390 ~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~C~~C~~~~fls~v~c~c---~~--~~~CL~H~~~~~~c~c~~~~~l~~r 462 (499)
|+.++..+..+.+.++.....+ +.++.++|..|+++||++.++|.. .. .++|++|+.+ .|.|-+++++++|
T Consensus 430 l~~~~~~~~~l~~~g~~i~~~~~~~~~~~~~C~~C~~~lFn~~~v~~~~~~~~~~~v~C~~Ca~~--~~~~l~~~~v~~r 507 (531)
T 3avr_A 430 LKQCQTLREALIAAGKEIIWHGRTKEEPAHYCSICEVEVFDLLFVTNESNSRKTYIVHCQDCARK--TSGNLENFVVLEQ 507 (531)
T ss_dssp HHHHHHHHHHHHHTTCCEEECCCCTTCCCEECTTTCCEECSEEEEEECTTCSSEEEEECHHHHHH--HCTTCTTCEEEEC
T ss_pred HHHHHHHHHHHHhCCCEEEeccccCCCCCeeccccchhheeeEEEEecCCCCCCCCcCChhhhhh--cCccccceEEEEE
Confidence 8877766776766655433322 245789999999999999988853 22 3689999974 2445589999999
Q ss_pred cChHHHHHHHHHHhch
Q 043353 463 KDIQEVEVVAKKFEEE 478 (499)
Q Consensus 463 y~~~eL~~~~~~~e~~ 478 (499)
|+++||.+++++|+..
T Consensus 508 y~~eeL~~~yd~f~~~ 523 (531)
T 3avr_A 508 YKMEDLMQVYDQFTLA 523 (531)
T ss_dssp SCHHHHHHHHHTCCCC
T ss_pred cCHHHHHHHHHheEec
Confidence 9999999999999876
No 5
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=100.00 E-value=2.2e-58 Score=485.05 Aligned_cols=276 Identities=16% Similarity=0.183 Sum_probs=234.3
Q ss_pred ccCCCCC-----CCCcccccccCCCCCCccceEEeeccccccceeecCCCceeEEEEeeCCCceEEeeCCchHHHHHHHH
Q 043353 186 HLKTLRG-----LPQSIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVA 260 (499)
Q Consensus 186 NL~nlp~-----~~~slL~~~~~~i~Gv~~p~lyiGm~~S~f~WH~ED~~l~SiNy~H~GapK~WY~VP~~~~~kfe~l~ 260 (499)
+|++||. ..||||+|++..|+|||+||||+||+||+|+||+||++|+||||||+|++|+||+||++++++||+++
T Consensus 207 eL~kLP~flr~~~~gslLs~l~~~I~GVNtpqLYigm~gS~t~wH~Ed~~l~SINynhggg~c~WY~VP~e~~~k~e~l~ 286 (510)
T 4ask_A 207 ELLKLPAFMRVTSTGNMLSHVGHTILGMNTVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFAVHEHYWETISAFC 286 (510)
T ss_dssp HGGGSCGGGSSSCTTBGGGGSSSCCTTTTSCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHHH
T ss_pred HHhhCcHHhCcCCCCchhhhCCCcCCCcChhheEEccccccccceecCCcceeEEEeecCCceeEEEECHHHHHHHHHHH
Confidence 3455554 46899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccchhhhhhcCCCChhhhhcccccccChhhHhhCCCceEEeeeCCCcEEEEcCCceeeeeecccceeeeeccccccc
Q 043353 261 RNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDW 340 (499)
Q Consensus 261 ~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~P~~L~~~gIpv~r~~Q~pGefVvtfP~aYH~gfn~Gfn~aEavNfa~~~W 340 (499)
++.. .+++ +..+|++|+.|+++||||||++|+|||||||||||||||+|+|||+++|||||+++|
T Consensus 287 ~k~~--------------~d~l-~~~~~pspe~L~kagIPvyr~iQkPGdfVit~PgtyH~Vqs~Gf~~niaWNvap~t~ 351 (510)
T 4ask_A 287 DRHG--------------VDYL-TGSWWPILDDLYASNIPVYRFVQRPGDLVWINAGTVHWVQATGWCNNIAWNVGPLTA 351 (510)
T ss_dssp HHTT--------------CCTT-TSCBCCCHHHHHHTTCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEECBSSH
T ss_pred HHhC--------------cchh-hccccCCHHHHHhCCCCeEEEEECCCCEEEECCCceEEEEecCeeeeeEEEecCCCH
Confidence 8753 3555 456688999999999999999999999999999999999999999999999999997
Q ss_pred c--cchHHHHHHHHhcCCCCCcCHHHHHHHHHHcccCCC--hhhHHHHHHHHHHHHHHHHHHHhhcCCCCccccc--Ccc
Q 043353 341 F--PFGEEAGKRYARLHKMVILPYQELLFKEVSEHEGTD--IPSSVKATVLHQIRSLNNALFCLNNLKMPFDYLQ--NSQ 414 (499)
Q Consensus 341 l--~~g~~a~~~y~~~~~~~~~s~~~Ll~~~a~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~ 414 (499)
. +.+.++.++|+..++.++|||++|+|+||++.+..| +...+|.+|.+.|+.++..+..+.+.++...... ..+
T Consensus 352 ~qlqlA~e~y~~n~~~~~~SivPm~~L~Wn~Ar~~k~~d~~l~~liK~~L~rSL~~~~~~~d~~~~~g~~i~~~~~~~~~ 431 (510)
T 4ask_A 352 YQYQLALERYEWNEVKNVKSIVPMIHVSWNVARTVKISDPDLFKMIKFCLLQSMKHCQVQRESLVRAGKKIAYQGRVKDE 431 (510)
T ss_dssp HHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEECCCCTTC
T ss_pred HHHHHHHHHHHHHHHhCcCcccChHHHHHHHHhhhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEeecCcCCCC
Confidence 5 566677788889999999999999999999876555 4567888999999888877777766555443332 234
Q ss_pred ccccccccccceeeEEEeeccC--C---ceeecccccccccCCCC-CCeEEEEEcChHHHHHHHHHHhchh
Q 043353 415 GSFVCDLCKRDCYLAFTECKSC--Q---RYTCLFHEFKSRHCSCG-YNRVVLLRKDIQEVEVVAKKFEEEE 479 (499)
Q Consensus 415 ~~~~C~~C~~~~fls~v~c~c~--~---~~~CL~H~~~~~~c~c~-~~~~l~~ry~~~eL~~~~~~~e~~~ 479 (499)
..++|..|..++|+...+..-+ . .++|+.||++. +-. +++++++||+++||.+++|+|....
T Consensus 432 ~~~~C~~C~~evFn~l~v~~~~~~~~~~~v~C~~Ca~~~---~~~~~~~~vl~~y~~~~L~~iyD~f~l~~ 499 (510)
T 4ask_A 432 PAYYCNECDVEVFNILFVTSENGSRNTYLVHCEGCARRR---SAGLQGVVVLEQYRTEELAQAYDAFTLAP 499 (510)
T ss_dssp CCEECTTTCCEECSEEEEEECC----CEEEECHHHHHHS---TTTTTTCEEEESSCHHHHHHHHHHCCCCC
T ss_pred cccccCCCCeEEEEEEEEEecCCCCCccceEChHhhhhc---CCCcceEEEEEEccHHHHHHHHhCeEecc
Confidence 5689999999999865554432 1 27999999742 334 8999999999999999999998763
No 6
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=100.00 E-value=3.3e-46 Score=378.77 Aligned_cols=154 Identities=19% Similarity=0.233 Sum_probs=135.4
Q ss_pred ccCCCCCC-----CCcccccccCCCCCCccceEEeeccccccceeecCCCceeEEEEeeCCCceEEeeCCchHHHHHHHH
Q 043353 186 HLKTLRGL-----PQSIFRFLEHIIPGITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVA 260 (499)
Q Consensus 186 NL~nlp~~-----~~slL~~~~~~i~Gv~~p~lyiGm~~S~f~WH~ED~~l~SiNy~H~GapK~WY~VP~~~~~kfe~l~ 260 (499)
+|+.||.. .+|||+|++..|+|||+||||+||+||+||||+||++|+||||||+|++|+||+||++++++||+++
T Consensus 173 el~kLP~~lr~~~~gslL~~~~~~I~Gvn~pqLYig~~gS~t~~H~Ed~~l~SiNynhgp~~~~Wy~VP~e~~~~~e~l~ 252 (332)
T 2xxz_A 173 ELLKLPAFMRVTSTGNMLSHVGHTILGMNTVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFAVHEHYWETISAFC 252 (332)
T ss_dssp HHTTSCGGGCTTTTCCCSEETTEECCCTTSEEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHHH
T ss_pred HHhhCcHhhcccCccchhhhcCCcCCCcChhheEeecCcccccceecCCcceeEEeecCCCceEEEEECHHHHHHHHHHH
Confidence 47777754 6899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccchhhhhhcCCCChhhhhcccccccChhhHhhCCCceEEeeeCCCcEEEEcCCceeeeeecccceeeeeccccccc
Q 043353 261 RNQVYSRDILSAAGEDGAFEVIAEKTTIFPPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDW 340 (499)
Q Consensus 261 ~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~P~~L~~~gIpv~r~~Q~pGefVvtfP~aYH~gfn~Gfn~aEavNfa~~~W 340 (499)
++.. ++++ +..++++|+.|+++||||||++|+|||||||||||||||||+|||++||||||+++|
T Consensus 253 ~k~~--------------~d~~-~~~~~~~p~~L~~~gIPvyr~~QkpGd~Vi~~PgayH~v~n~G~~~n~awN~a~~~~ 317 (332)
T 2xxz_A 253 DRHG--------------VDYL-TGSWWPILDDLYASNIPVYRFVQRPGDLVWINAGTVHWVQATGWCNNIAWNVGPLTA 317 (332)
T ss_dssp HHTT--------------CCTT-TSCBCCCHHHHHHTTCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEEESCTT
T ss_pred HhcC--------------Cchh-hceecCCHHHHHhCCCCeEEEEECCCCEEEECCCceEEEEecceeeEEEEEeCCCcH
Confidence 8753 2333 456789999999999999999999999999999999999999999999999999999
Q ss_pred ccchHHHHHHHHhcC
Q 043353 341 FPFGEEAGKRYARLH 355 (499)
Q Consensus 341 l~~g~~a~~~y~~~~ 355 (499)
+++ ..|+++|+-++
T Consensus 318 ~q~-~~a~erye~n~ 331 (332)
T 2xxz_A 318 YQY-QLALERYEWNE 331 (332)
T ss_dssp GGG-GGC--------
T ss_pred HHH-HHHHHHHHhhc
Confidence 988 48888887553
No 7
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=97.96 E-value=4.8e-05 Score=79.03 Aligned_cols=139 Identities=14% Similarity=0.025 Sum_probs=99.4
Q ss_pred ceEEeeccccccceeecCCCceeEEEEeeCCCceEEeeCCchHHHHHHHHHhhccchhhhhhcCCCChhhhhcccccccC
Q 043353 211 PMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFP 290 (499)
Q Consensus 211 p~lyiGm~~S~f~WH~ED~~l~SiNy~H~GapK~WY~VP~~~~~kfe~l~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~ 290 (499)
-|+++|+.+|.+.+|++-....+.|.+..| -|.||-+||..... . +.++...+ . .+ ...++
T Consensus 176 r~~~mGp~gS~T~fHiD~~gTs~w~~vi~G-rK~w~L~PPt~~nl-~-~y~~~~~s-------~----~~----~e~~~- 236 (392)
T 3pua_A 176 KYCLICVKDSYTDFHIDSGGASAWYHVLKG-EKTFYLIRPASANI-S-LYERWRSA-------S----NH----SEMFF- 236 (392)
T ss_dssp CEEEEECTTCEEEEECCGGGCEEEEEEEEE-EEEEEEECCCHHHH-H-HHHHHHHS-------T----TG----GGSCG-
T ss_pred eEEEEeCCCCCCCEeECCCCCceeeeeccc-eEEEEEECCCcccc-c-chhhcccC-------c----ch----hhhhh-
Confidence 389999999999999999888888999888 79999999987532 1 11111000 0 00 01111
Q ss_pred hhhHhhCCCceEEeeeCCCcEEEEcCCceeeeeecccceeeeecccccccccchHHHHHHHHhc--CCCCCcCH-HHHHH
Q 043353 291 PKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARL--HKMVILPY-QELLF 367 (499)
Q Consensus 291 P~~L~~~gIpv~r~~Q~pGefVvtfP~aYH~gfn~Gfn~aEavNfa~~~Wl~~g~~a~~~y~~~--~~~~~~s~-~~Ll~ 367 (499)
+.. ....++++|+|||.+++-.|-+|+++|..-+++..-||.+..=++...++.+.=++. ...-.||+ +.|+|
T Consensus 237 ~~~----~~~~~ev~l~pGEtlfIPsGWwH~V~nledSIai~gNFl~~~nl~~~l~~~~~E~~~~~~~~f~fp~F~~~~w 312 (392)
T 3pua_A 237 ADQ----VDKCYKCIVKQGQTLFIPSGWIYATLTPVDCLAFAGHFLHSLSVEMQMRAYEVERRLKLGSLTQFPNFETACW 312 (392)
T ss_dssp GGG----SSCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCTTCHHHHHHHHHHHHHHTCCCSSCCTTHHHHHH
T ss_pred ccc----ccceEEEEECCCcEEeeCCCceEEEecCCCEEEEcCcccChhhHHHHHHHHHHHHHhCCCccCcCCChHHHHH
Confidence 111 245689999999999999999999999999999999999998887766666532222 23334644 55888
Q ss_pred HHHHc
Q 043353 368 KEVSE 372 (499)
Q Consensus 368 ~~a~~ 372 (499)
-+|..
T Consensus 313 y~~~~ 317 (392)
T 3pua_A 313 YMGKH 317 (392)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77754
No 8
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=97.96 E-value=4.6e-05 Score=78.67 Aligned_cols=139 Identities=14% Similarity=0.048 Sum_probs=98.1
Q ss_pred ceEEeeccccccceeecCCCceeEEEEeeCCCceEEeeCCchHHHHHHHHHhhccchhhhhhcCCCChhhhhcccccccC
Q 043353 211 PMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFP 290 (499)
Q Consensus 211 p~lyiGm~~S~f~WH~ED~~l~SiNy~H~GapK~WY~VP~~~~~kfe~l~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~ 290 (499)
-|+++|+.+|.+.+|++-....+-|.+..| -|.|+-+||.... +. +.++...+ . . +...++
T Consensus 149 r~l~mGp~gS~T~~HiD~~gts~w~~vv~G-rK~w~L~PPt~~n-l~-~y~~~~~s-------~--~------~~e~~~- 209 (371)
T 3k3o_A 149 KYCLMSVRDSYTDFHIDFGGTSVWYHVLKG-EKIFYLIRPTNAN-LT-LFECWSSS-------S--N------QNEMFF- 209 (371)
T ss_dssp CEEEEECTTEEEEEECCGGGCEEEEEEEEE-EEEEEEECCCHHH-HH-HHHHHHTS-------T--T------GGGSCG-
T ss_pred eEEEEcCCCCCCCeEECCCCCceeEEEeee-EEEEEEECCCccc-cc-cccccccC-------C--c------cchhhc-
Confidence 489999999999999999888888899998 7999999998853 11 11111000 0 0 001111
Q ss_pred hhhHhhCCCceEEeeeCCCcEEEEcCCceeeeeecccceeeeecccccccccchHHHHHHHHhcCC--CCCcCH-HHHHH
Q 043353 291 PKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHK--MVILPY-QELLF 367 (499)
Q Consensus 291 P~~L~~~gIpv~r~~Q~pGefVvtfP~aYH~gfn~Gfn~aEavNfa~~~Wl~~g~~a~~~y~~~~~--~~~~s~-~~Ll~ 367 (499)
+. .....++++|+|||.+++-.|-+|+++|..-+++..-||.+..=++.-.++.+.=++.+. .=.||+ +.++|
T Consensus 210 ~~----~~~~~~ev~l~pGEtLfIPsGWwH~V~nledSIai~~NFl~~~nl~~~l~~~~~E~~~~~~~~f~fp~F~~~~w 285 (371)
T 3k3o_A 210 GD----QVDKCYKCSVKQGQTLFIPTGWIHAVLTPVDCLAFGGNFLHSLNIEMQLKAYEIEKRLSTADLFRFPNFETICW 285 (371)
T ss_dssp GG----TSSCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCSTTHHHHHHHHHHHHHHC----CCCTTHHHHHH
T ss_pred cc----ccCceEEEEECCCcEEEeCCCCeEEEecCCCeEEECCcccchhhHHHHHHHHHHHHhcCCCcccccccHHHHHH
Confidence 11 124679999999999999999999999999999999999998877766665543222222 223544 55888
Q ss_pred HHHHc
Q 043353 368 KEVSE 372 (499)
Q Consensus 368 ~~a~~ 372 (499)
-+|..
T Consensus 286 ~~~~~ 290 (371)
T 3k3o_A 286 YVGKH 290 (371)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77764
No 9
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=97.94 E-value=6e-05 Score=79.77 Aligned_cols=139 Identities=14% Similarity=0.024 Sum_probs=99.4
Q ss_pred ceEEeeccccccceeecCCCceeEEEEeeCCCceEEeeCCchHHHHHHHHHhhccchhhhhhcCCCChhhhhcccccccC
Q 043353 211 PMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFP 290 (499)
Q Consensus 211 p~lyiGm~~S~f~WH~ED~~l~SiNy~H~GapK~WY~VP~~~~~kfe~l~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~ 290 (499)
-|+++|+.+|.+.+|++-....+.|.+..| -|.|+-+||.... +. +.++.... . . +...++
T Consensus 233 r~~~mG~~gS~T~~HiD~~~ts~w~~vi~G-rK~w~L~PPt~~n-l~-~~~~~~~s-------~----~----~~~~~~- 293 (447)
T 3kv4_A 233 KYCLMSVRDSYTDFHIDFGGTSVWYHVLKG-EKIFYLIRPTNAN-LT-LFECWSSS-------S----N----QNEMFF- 293 (447)
T ss_dssp CEEEEECTTEEEEEECCGGGCEEEEEEEES-EEEEEEECCCHHH-HH-HHHHHHTC-------S----S----GGGSCG-
T ss_pred eEEEEeCCCCCCCeeECCCCCceeEEEeee-EEEEEEeCCCccc-cc-chhhcccC-------c----c----hhhhhc-
Confidence 389999999999999999888888888888 7999999999643 11 11111100 0 0 001111
Q ss_pred hhhHhhCCCceEEeeeCCCcEEEEcCCceeeeeecccceeeeecccccccccchHHHHHHHHhcCCCC--CcCH-HHHHH
Q 043353 291 PKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHKMV--ILPY-QELLF 367 (499)
Q Consensus 291 P~~L~~~gIpv~r~~Q~pGefVvtfP~aYH~gfn~Gfn~aEavNfa~~~Wl~~g~~a~~~y~~~~~~~--~~s~-~~Ll~ 367 (499)
+. .....++++|+|||.+++-.|-+|+++|..-+++..-||.+..-++.-.+..+.=++.+... .||+ +.++|
T Consensus 294 ~~----~~~~~~~v~l~pGetlfIPsGWwH~V~nledsIai~~NF~~~~nl~~~l~~~~~E~~~~~~~~~~~p~f~~~~w 369 (447)
T 3kv4_A 294 GD----QVDKCYKCSVKQGQTLFIPTGWIHAVLTPVDCLAFGGNFLHSLNIEMQLKAYEIEKRLSTADLFRFPNFETICW 369 (447)
T ss_dssp GG----GSSCCEEEEEETTCEEEECTTCEEEEEESSCEEEEEEEECCSTTHHHHHHHHHHHHHTTCCGGGSCTTHHHHHH
T ss_pred cc----cccceEEEEECCCcEEecCCCCeEEEecCCCEEEEccccccccCHHHHHHHHHHHHhcCCCccccccCHHHHHH
Confidence 11 12467899999999999999999999999999999999999988877666554433333222 3554 45888
Q ss_pred HHHHc
Q 043353 368 KEVSE 372 (499)
Q Consensus 368 ~~a~~ 372 (499)
-+|..
T Consensus 370 ~~~~~ 374 (447)
T 3kv4_A 370 YVGKH 374 (447)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77765
No 10
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=97.87 E-value=7.5e-05 Score=77.76 Aligned_cols=139 Identities=14% Similarity=0.050 Sum_probs=98.2
Q ss_pred ceEEeeccccccceeecCCCceeEEEEeeCCCceEEeeCCchHHHHHHHHHhhccchhhhhhcCCCChhhhhcccccccC
Q 043353 211 PMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFP 290 (499)
Q Consensus 211 p~lyiGm~~S~f~WH~ED~~l~SiNy~H~GapK~WY~VP~~~~~kfe~l~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~ 290 (499)
-|+++|+.+|.+.+|++-....+-|.+..| -|.|+-+||..... .+.++.... . . +...++
T Consensus 177 r~l~mGp~gS~T~~HiD~~gts~w~~vv~G-rK~w~L~PPt~~nl--~ly~~~~~s------~-----~----~~e~~~- 237 (397)
T 3kv9_A 177 KYCLMGVQDSYTDFHIDFGGTSVWYHVLWG-EKIFYLIKPTDENL--ARYESWSSS------V-----T----QSEVFF- 237 (397)
T ss_dssp CEEEEECTTCEEEEECCGGGCEEEEEEEEE-EEEEEEECCCHHHH--HHHHHHHTS------G-----G----GGGSCG-
T ss_pred eEEEEcCCCCCCCEEECCCCCceeeeecCc-eEEEEEeCCccccc--ccccccccC------C-----C----cchhhh-
Confidence 389999999999999999999888999999 79999999987641 111211100 0 0 001111
Q ss_pred hhhHhhCCCceEEeeeCCCcEEEEcCCceeeeeecccceeeeecccccccccchHHHHHHHHhcCCCC--CcC-HHHHHH
Q 043353 291 PKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHKMV--ILP-YQELLF 367 (499)
Q Consensus 291 P~~L~~~gIpv~r~~Q~pGefVvtfP~aYH~gfn~Gfn~aEavNfa~~~Wl~~g~~a~~~y~~~~~~~--~~s-~~~Ll~ 367 (499)
+. .....++++|+|||.+++-.|-+|++.|..-+++..-||....=++.-.++.+.=...+... .|| .++|+|
T Consensus 238 ~~----~~~~~~~v~l~pGe~lfIPsGW~H~V~nledSIai~~NFl~~~nl~~~l~~~~~E~~~k~~~~~~fp~F~~~~w 313 (397)
T 3kv9_A 238 GD----KVDKCYKCVVKQGHTLFVPTGWIHAVLTSQDCMAFGGNFLHNLNIGMQLRCYEMEKRLKTPDLFKFPFFEAICW 313 (397)
T ss_dssp GG----GSSCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCSTTHHHHHHHHHHHHHHTCGGGGGSTTHHHHHH
T ss_pred cc----ccCceEEEEECCCCEEEeCCCCeEEccCCcCeEEECCcccCchhHHHHHHHHHHHHhcCCCccCcCccHHHHHH
Confidence 11 12367899999999999999999999999999999999999887776666554322333222 344 455777
Q ss_pred HHHHc
Q 043353 368 KEVSE 372 (499)
Q Consensus 368 ~~a~~ 372 (499)
-+|.+
T Consensus 314 ~~a~~ 318 (397)
T 3kv9_A 314 FVAKN 318 (397)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77754
No 11
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=97.86 E-value=0.0001 Score=78.96 Aligned_cols=139 Identities=14% Similarity=0.031 Sum_probs=98.5
Q ss_pred ceEEeeccccccceeecCCCceeEEEEeeCCCceEEeeCCchHHHHHHHHHhhccchhhhhhcCCCChhhhhcccccccC
Q 043353 211 PMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFP 290 (499)
Q Consensus 211 p~lyiGm~~S~f~WH~ED~~l~SiNy~H~GapK~WY~VP~~~~~kfe~l~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~ 290 (499)
-|+++|..+|.+.+|++-....+.|.+..| -|.|+-+||..... .+.++.. ... .....|+
T Consensus 268 r~~~mG~~gS~T~~H~D~~~t~~w~~vv~G-~K~w~L~PPt~~~~--~~y~~~~------~~~--~~~~~~~-------- 328 (488)
T 3kv5_D 268 KYCLMGVQDSYTDFHIDFGGTSVWYHVLWG-EKIFYLIKPTDENL--ARYESWS------SSV--TQSEVFF-------- 328 (488)
T ss_dssp CEEEEECTTCEEEEECCGGGCEEEEEEEEE-EEEEEEECCCHHHH--HHHHHHH------TCS--SGGGSCG--------
T ss_pred eEEEEcCCCCCCCeEECCCCCceeeeccCe-eEEEEEeCCccccc--ccccccc------cCC--ccchhhh--------
Confidence 489999999999999999988888888888 79999999986541 1111111 000 0000111
Q ss_pred hhhHhhCCCceEEeeeCCCcEEEEcCCceeeeeecccceeeeecccccccccchHHHHHHHHhcCCCC--CcCH-HHHHH
Q 043353 291 PKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGKRYARLHKMV--ILPY-QELLF 367 (499)
Q Consensus 291 P~~L~~~gIpv~r~~Q~pGefVvtfP~aYH~gfn~Gfn~aEavNfa~~~Wl~~g~~a~~~y~~~~~~~--~~s~-~~Ll~ 367 (499)
.......++++|+|||.+++-.|=+|+++|..-+++..-||....=++.-.++.+.=+..+... .||+ ++|+|
T Consensus 329 ----~~~~~~~~~~~l~pGe~lfIPsGWwH~V~nledsIai~~NF~~~~nl~~~l~~~~~e~~~~~~~~~~~p~f~~~~w 404 (488)
T 3kv5_D 329 ----GDKVDKCYKCVVKQGHTLFVPTGWIHAVLTSQDCMAFGGNFLHNLNIGMQLRCYEMEKRLKTPDLFKFPFFEAICW 404 (488)
T ss_dssp ----GGSSSCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCSTTHHHHHHHHHHHHHTTCCTTSSCTTHHHHHH
T ss_pred ----cccccceEEEeeCCCCEEEeCCCceEEeeCCCCeEEEccccCCccCHHHHHHHHHHHHhcCCcccccCccHHHHHH
Confidence 1123467899999999999999999999999999999999999887776666554433333322 3444 45777
Q ss_pred HHHHc
Q 043353 368 KEVSE 372 (499)
Q Consensus 368 ~~a~~ 372 (499)
-+|.+
T Consensus 405 ~~~~~ 409 (488)
T 3kv5_D 405 FVAKN 409 (488)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77754
No 12
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=97.77 E-value=3.9e-05 Score=78.99 Aligned_cols=97 Identities=11% Similarity=0.068 Sum_probs=75.8
Q ss_pred ceEEeeCCchHHHHHHHHHhhccchhhhhhcCCCChhhhhcccccccChh----hHhhCCCceEEeeeCCCcEEEEcCCc
Q 043353 243 KTWYGVPGHHALQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFPPK----ILLDNGVSVYKAVQKPGEFVITFPRV 318 (499)
Q Consensus 243 K~WY~VP~~~~~kfe~l~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~P~----~L~~~gIpv~r~~Q~pGefVvtfP~a 318 (499)
-+|-+..+.+++|+.++++++... +... .....+-++...+.++.. ...+.||..+.++|++||.|++-+|+
T Consensus 234 AlW~Ifr~~D~~klr~~L~~~~~e---~~~~-~~~~~dPihdq~~yL~~~~r~~L~ee~gv~~~~~~Q~~GeavfiPaG~ 309 (392)
T 2ypd_A 234 ALWHIYAGKDVDKIREFLQKISKE---QGLE-VLPEHDPIRDQSWYVNKKLRQRLLEEYGVRTCTLIQFLGDAIVLPAGA 309 (392)
T ss_dssp EEEEEECGGGHHHHHHHHHHHHHH---HC-------CCHHHHTCCCCCHHHHHHHHHHHCCCCEEEEEETTCEEEECTTC
T ss_pred ceeeeeCHhhHHHHHHHHHHHHHh---hCCC-ccCCCCcCcCCCEEecHHHHHHHHHhcCCeeEEEEEcCCCEEEecCCC
Confidence 489999999999999999986421 1000 001134566667778874 23568999999999999999999999
Q ss_pred eeeeeecccceeeeecccccccccc
Q 043353 319 YHAGFSNGFNCGEAVNFAIRDWFPF 343 (499)
Q Consensus 319 YH~gfn~Gfn~aEavNfa~~~Wl~~ 343 (499)
+|.+.|.+-++..|+||.++.-+..
T Consensus 310 ~HQV~Nl~~~i~va~df~spe~~~~ 334 (392)
T 2ypd_A 310 LHQVQNFHSCIQVTEDFVSPEHLVE 334 (392)
T ss_dssp EEEEEESSEEEEEEEEECCGGGHHH
T ss_pred HHHHhcccchhhHhhhhcChhhHHH
Confidence 9999999999999999999876653
No 13
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=97.71 E-value=0.00036 Score=73.91 Aligned_cols=138 Identities=14% Similarity=0.051 Sum_probs=95.7
Q ss_pred ceEEeeccccccceeecCCCceeEEEEeeCCCceEEeeCCchHHHHHHHHHhhccchhhhhhcCCCChhhhhcccccccC
Q 043353 211 PMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIFP 290 (499)
Q Consensus 211 p~lyiGm~~S~f~WH~ED~~l~SiNy~H~GapK~WY~VP~~~~~kfe~l~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~ 290 (499)
-|+++|..+|.+.+|++-....+.|.+..| -|.|+-+||...... +..... .+. . +... +-
T Consensus 198 r~~~mGp~gS~T~~H~D~~~ts~w~avi~G-rK~w~L~PP~~~~~~--~y~~~~-----~s~-~---------q~~~-~~ 258 (451)
T 2yu1_A 198 KYCLMSVRGCYTDFHVDFGGTSVWYHIHQG-GKVFWLIPPTAHNLE--LYENWL-----LSG-S---------QGDI-FL 258 (451)
T ss_dssp CEEEEECTTCEEEEECCGGGCEEEEEEEES-CEEEEEECCCHHHHH--HHHHHH-----HTT-C---------CSSS-CH
T ss_pred eEEEEccCCCCCCeEECCCCcchhhheecc-eEEEEEeCCCccccc--cccccc-----ccc-c---------chhh-hh
Confidence 488999999999999999888888888888 699999999985421 111110 000 0 0001 11
Q ss_pred hhhHhhCCCceEEeeeCCCcEEEEcCCceeeeeecccceeeeecccccccccchHHHHHH--HHhcCCCCCcCHHH-HHH
Q 043353 291 PKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGKR--YARLHKMVILPYQE-LLF 367 (499)
Q Consensus 291 P~~L~~~gIpv~r~~Q~pGefVvtfP~aYH~gfn~Gfn~aEavNfa~~~Wl~~g~~a~~~--y~~~~~~~~~s~~~-Ll~ 367 (499)
|+.+ -..++++++|||.+++-.|=+|++.|..-+++...||.+..=++.-.+..+. -......-.||+.+ |+|
T Consensus 259 p~~~----~~~~~v~l~pGE~LfIPsGWwH~V~nledsIait~NF~~~~nl~~~l~~~~~E~~~~v~~~~~~p~f~~~~w 334 (451)
T 2yu1_A 259 GDRV----SDCQRIELKQGYTFVIPSGWIHAVYTPTDTLVFGGNFLHSFNIPMQLKIYNIEDRTRVPNKFRYPFYYEMCW 334 (451)
T ss_dssp HHHS----SCCEEEEECTTCEEEECTTCEEEEECSSCEEEEEEEECCSSSHHHHHHHHHHHHHTTCCTTSSCTTHHHHHH
T ss_pred cccc----ccceEEEECCCcEEEeCCCceEEEecCCCeEEEeeeeCCcccHHHHHHHHHHHHhhCCCccccCccHHHHHH
Confidence 3321 2568999999999999999999999999999999999998777655544432 22233344566654 667
Q ss_pred HHHH
Q 043353 368 KEVS 371 (499)
Q Consensus 368 ~~a~ 371 (499)
-+|.
T Consensus 335 ~~~~ 338 (451)
T 2yu1_A 335 YVLE 338 (451)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5554
No 14
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=97.52 E-value=0.00034 Score=71.50 Aligned_cols=122 Identities=23% Similarity=0.223 Sum_probs=85.1
Q ss_pred cceEEeeccccccceeecCCCceeEEEEeeCCCceEEeeCCchHHHHHHHHHhhccchhhhhhcCCCChhhhhccccccc
Q 043353 210 DPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIF 289 (499)
Q Consensus 210 ~p~lyiGm~~S~f~WH~ED~~l~SiNy~H~GapK~WY~VP~~~~~kfe~l~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~ 289 (499)
..++++|..+|.+.+|.+.....+++.+..| .|.|+.+|++....+-.. + ... .........+++.. .
T Consensus 173 ~~~~~~G~~gs~t~~H~D~~~~~~~~~~v~G-~K~~~L~pP~~~~~ly~~-----~-~~~-~~~~~~~~~~w~~~----~ 240 (336)
T 3k2o_A 173 YRWFVMGPPRSGTGIHIDPLGTSAWNALVQG-HKRWCLFPTSTPRELIKV-----T-RDE-GGNQQDEAITWFNV----I 240 (336)
T ss_dssp CEEEEEECTTCEEEEECCGGGCEEEEEEEES-CEEEEEECTTSCHHHHCC-----C-HHH-HGGGTTCHHHHHHH----T
T ss_pred ceEEEECCCCccCCcccCCCccceeeEEEee-eEEEEEeCCCcchhcccC-----c-ccc-cCCCccchhhhhhh----h
Confidence 4678999999999999999888888888888 699999999975432110 0 000 00000011122111 1
Q ss_pred ChhhHhh---CCCceEEeeeCCCcEEEEcCCceeeeeecccceeeeecccccccccc
Q 043353 290 PPKILLD---NGVSVYKAVQKPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDWFPF 343 (499)
Q Consensus 290 ~P~~L~~---~gIpv~r~~Q~pGefVvtfP~aYH~gfn~Gfn~aEavNfa~~~Wl~~ 343 (499)
-|..-.. .+.+.+.++|+|||.+++-+|-+|++.|.+-+++.+.||.+...++.
T Consensus 241 ~P~~~~~~~p~~~~~~~~~l~pGd~l~iP~gw~H~v~~~~~sisv~~~f~~~~nl~~ 297 (336)
T 3k2o_A 241 YPRTQLPTWPPEFKPLEILQKPGETVFVPGGWWHVVLNLDTTIAITQNFASSTNFPV 297 (336)
T ss_dssp GGGGGSTTSCGGGCCEEEEECTTCEEEECTTCEEEEEESSCEEEEEEEECCTTTHHH
T ss_pred CcchhhhcccccCceEEEEECCCCEEEeCCCCcEEEecCCCeEEEEcccCCcccHHH
Confidence 1211100 14678999999999999999999999999999999999999876653
No 15
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=97.39 E-value=0.00049 Score=65.04 Aligned_cols=111 Identities=12% Similarity=0.080 Sum_probs=72.0
Q ss_pred cceEEeeccccccceeecCCCceeEEEEeeCCCceEEeeCCchHHHHHHHHHhhccchhhhhhcCCCChhhhhccccccc
Q 043353 210 DPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIF 289 (499)
Q Consensus 210 ~p~lyiGm~~S~f~WH~ED~~l~SiNy~H~GapK~WY~VP~~~~~kfe~l~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~ 289 (499)
.+++++|..+|.+.+|.... .+++.+..| .|.|...|+++...+ +......... ....++. .....-
T Consensus 125 ~~~~wiG~~gs~t~~H~D~~--~n~~~qv~G-~K~w~L~pP~~~~~l--------~~~~~~~~~~-~s~vd~~-~~d~~~ 191 (235)
T 4gjz_A 125 TINAWFGPQGTISPLHQDPQ--QNFLVQVMG-RKYIRLYSPQESGAL--------YPHDTHLLHN-TSQVDVE-NPDLEK 191 (235)
T ss_dssp EEEEEEECTTCEEEEECCSS--EEEEEEEES-CEEEEEECGGGGGGS--------CBCSSTTTTT-BBSSCTT-SCCTTT
T ss_pred ceEEEEeCCCCCceeeeccc--cceEEEEee-eEeeEEcCccccccc--------ccCcccccCc-ccccccc-Ccchhh
Confidence 46899999999999998875 355666667 799999999986532 1100000000 0000000 000001
Q ss_pred ChhhHhhCCCceEEeeeCCCcEEEEcCCceeeeeecccceeeeeccc
Q 043353 290 PPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFSNGFNCGEAVNFA 336 (499)
Q Consensus 290 ~P~~L~~~gIpv~r~~Q~pGefVvtfP~aYH~gfn~Gfn~aEavNfa 336 (499)
-|. -.+.+.+.++|+|||.+++-+|-+|.+.|.+.|++.+++|+
T Consensus 192 ~p~---~~~~~~~~~~l~pGD~LyiP~gW~H~V~~l~~sisvn~w~s 235 (235)
T 4gjz_A 192 FPK---FAKAPFLSCILSPGEILFIPVKYWHYVRALDLSFSVSFWWS 235 (235)
T ss_dssp CGG---GGGCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEEC
T ss_pred Ccc---ccCCCcEEEEECCCCEEEeCCCCcEEEEECCCEEEEEEecC
Confidence 122 12467899999999999999999999999998887666653
No 16
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=97.28 E-value=0.00087 Score=71.76 Aligned_cols=139 Identities=17% Similarity=0.069 Sum_probs=94.7
Q ss_pred cceEEeeccccccceeecCCCceeEEEEeeCCCceEEeeCCchHHHHHHHHHhhccchhhhhhcCCCChhhhhccccccc
Q 043353 210 DPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIF 289 (499)
Q Consensus 210 ~p~lyiGm~~S~f~WH~ED~~l~SiNy~H~GapK~WY~VP~~~~~kfe~l~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~ 289 (499)
.-|+++|+.+|.+.+|++-....+.+++..| -|.||.+||..... . +.+... .. + +...++
T Consensus 297 ~rf~lmg~~gS~Td~HiD~~gts~w~~v~~G-rK~w~L~PPt~~nl-~-~y~~w~-------~s-----~----~~~~wf 357 (528)
T 3pur_A 297 EQFCLAGMAGSYTDFHVDFGGSSVYYHILKG-EKIFYIAAPTEQNF-A-AYQAHE-------TS-----P----DTTTWF 357 (528)
T ss_dssp SSEEEEECTTEEEEEECCGGGCEEEEEEEEE-EEEEEEECCCHHHH-H-HHHHHH-------HS-----S----CCSCCG
T ss_pred eEEEEEeCCCCCCCeeECCCCCceeEEEecc-eEEEEEeCCCccch-h-hhhhhc-------cC-----C----chhhhh
Confidence 3689999999999999998888777777777 79999999986431 1 111111 00 0 011122
Q ss_pred ChhhHhhCCCceEEeeeCCCcEEEEcCCceeeeeecccceeeeecccccccccchHHHHH--HH--HhcCCC--CCcCHH
Q 043353 290 PPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDWFPFGEEAGK--RY--ARLHKM--VILPYQ 363 (499)
Q Consensus 290 ~P~~L~~~gIpv~r~~Q~pGefVvtfP~aYH~gfn~Gfn~aEavNfa~~~Wl~~g~~a~~--~y--~~~~~~--~~~s~~ 363 (499)
. +.+ ...+++++|+|||.+++-+|-+|+++|.--+++..-||.+..=++...+..+ .+ +..+-. =.||..
T Consensus 358 g-d~l---~~~~~~v~l~pGEtlfIPsGW~HaV~tleDSIaiggNFl~~~nl~~qlri~~iE~~~~k~~~~~~kf~fp~F 433 (528)
T 3pur_A 358 G-DIA---NGAVKRVVIKEGQTLLIPAGWIHAVLTPVDSLVFGGNFLHLGNLEMQMRVYHLENAIRKEIRSEEKFYFPNF 433 (528)
T ss_dssp G-GGT---TTCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCGGGHHHHHHHHHHHHHHHHHCCCTTCCCCTTH
T ss_pred c-ccc---cccEEEEEECCCCEEEecCCceEEEecCCCeEEEcCcccchhhHHHHHHHHHHHHhhhhccCCCccccCcCH
Confidence 1 112 1356789999999999999999999999999999999999887766555443 22 122222 256655
Q ss_pred H-HHHHHHH
Q 043353 364 E-LLFKEVS 371 (499)
Q Consensus 364 ~-Ll~~~a~ 371 (499)
+ ++|-.|.
T Consensus 434 ~~v~W~y~~ 442 (528)
T 3pur_A 434 ELLHWMYMR 442 (528)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 4 6665554
No 17
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=96.46 E-value=0.012 Score=60.25 Aligned_cols=115 Identities=17% Similarity=0.068 Sum_probs=73.5
Q ss_pred CccceEEeeccccccceeecCCCceeEEEEeeCCCceEEeeCCchHHHHHHHHHhhccchhhhhhcCCCChhhhhccccc
Q 043353 208 ITDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTT 287 (499)
Q Consensus 208 v~~p~lyiGm~~S~f~WH~ED~~l~SiNy~H~GapK~WY~VP~~~~~kfe~l~~~~~~~~~l~~~~~~~~~~~~l~~~~~ 287 (499)
+...++++|..+|.+.+|.+.+ ..++.+..| .|.|...|+.....+ .+.+......+. ...++. ....
T Consensus 182 ~~~~~l~iG~~gs~t~~H~D~~--~n~~~qv~G-~K~~~L~pP~~~~~l-------y~~~~~~~~~~~-s~vd~~-~~d~ 249 (349)
T 3d8c_A 182 LTSNLLLIGMEGNVTPAHYGEQ--QNFFAQIKG-YKRCILFPPDQFECL-------YPYPVHHPCDRQ-SQVDFD-NPDY 249 (349)
T ss_dssp EEECEEEEECTTCEEEEECCSE--EEEEEEEES-CEEEEEECGGGHHHH-------CBBCTTSTTBTB-BCSCTT-SCCT
T ss_pred cccceEEEECCCCCccceECCh--hcEEEEEec-eEEEEEeCcchhhhh-------ccccccCCCCCc-ccccCC-Ccch
Confidence 3456799999999999999765 566667777 799999999986533 110000000000 000110 0000
Q ss_pred ccChhhHhhCCCceEEeeeCCCcEEEEcCCceeeeeecc-cceeeeecccc
Q 043353 288 IFPPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFSNG-FNCGEAVNFAI 337 (499)
Q Consensus 288 ~~~P~~L~~~gIpv~r~~Q~pGefVvtfP~aYH~gfn~G-fn~aEavNfa~ 337 (499)
---|. + .+.+.+.++++|||.+++-+|-+|.+.|.+ -.++.||||-.
T Consensus 250 ~~~p~-~--~~~~~~~~~l~pGD~LyiP~gWwH~V~~l~d~~~sisvn~w~ 297 (349)
T 3d8c_A 250 ERFPN-F--QNVVGYETVVGPGDVLYIPMYWWHHIESLLNGGITITVNFWY 297 (349)
T ss_dssp TTCGG-G--GGCCEEEEEECTTCEEEECTTCEEEEEECTTSCCEEEEEEEE
T ss_pred hhCcc-c--ccCCcEEEEECCCCEEEECCCCcEEEEEcCCCCcEEEEEEEc
Confidence 01121 1 235789999999999999999999999997 45677777643
No 18
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=95.91 E-value=0.034 Score=56.52 Aligned_cols=109 Identities=13% Similarity=0.120 Sum_probs=74.0
Q ss_pred ccceEEeeccccccceeecCCCceeEEEEeeCCCceEEeeCCchHHHHHHHHHhhccchhhhhhcCCC-Chhhhhccccc
Q 043353 209 TDPMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQVYSRDILSAAGED-GAFEVIAEKTT 287 (499)
Q Consensus 209 ~~p~lyiGm~~S~f~WH~ED~~l~SiNy~H~GapK~WY~VP~~~~~kfe~l~~~~~~~~~l~~~~~~~-~~~~~l~~~~~ 287 (499)
...++++|..++.+.+|.... ..++.+..| .|.|...|+.....+ |. .+.. ...++ .....
T Consensus 167 ~~s~l~~g~~g~~~~~H~D~~--~n~~~qv~G-~K~w~L~pP~~~~~l--------y~------~~~~~~~~d~-~~~d~ 228 (338)
T 3al5_A 167 FSSVFRISSPGLQLWTHYDVM--DNLLIQVTG-KKRVVLFSPRDAQYL--------YL------KGTKSEVLNI-DNPDL 228 (338)
T ss_dssp EEEEEEEECTTCEEEEECCSS--EEEEEECSS-CEEEEEECGGGGGGG--------TE------ETTEESCCCS-SSCCT
T ss_pred ccceeEECCCCCCccceECCc--ccEEEEEEE-EEEEEEECccccccc--------cc------CCCCcccccC-CCcch
Confidence 356899999999999999775 355556667 799999999875432 10 0000 00000 00000
Q ss_pred ccChhhHhhCCCceEEeeeCCCcEEEEcCCceeeeeecccceeeeeccccc
Q 043353 288 IFPPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFSNGFNCGEAVNFAIR 338 (499)
Q Consensus 288 ~~~P~~L~~~gIpv~r~~Q~pGefVvtfP~aYH~gfn~Gfn~aEavNfa~~ 338 (499)
-.-|. +. +.+.+.++++|||.+++-+|-+|.+.|.+.+++.+++|...
T Consensus 229 ~~~p~-~~--~~~~~~~~L~pGD~LyiP~gWwH~v~~l~~sisvn~~~~~~ 276 (338)
T 3al5_A 229 AKYPL-FS--KARRYECSLEAGDVLFIPALWFHNVISEEFGVGVNIFWKHL 276 (338)
T ss_dssp TTCTT-GG--GCCEEEEEECTTCEEEECTTCEEEEEESSCEEEEEEEECSS
T ss_pred hhCcc-cc--cCCCEEEEECCCCEEEECCCCeEEEeeCCCEEEEEEEecCC
Confidence 01122 22 34789999999999999999999999999999888887654
No 19
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=85.85 E-value=2.5 Score=42.75 Aligned_cols=120 Identities=15% Similarity=0.114 Sum_probs=72.2
Q ss_pred ceEEeeccccccceeecCCCceeEEEEeeCCCceEEee-CCchHHHHHHHHHhhccchhhhhhcCCCChhhhhccccccc
Q 043353 211 PMLYIGMLFSMFAWHVEDHYLHSINYHHSGAPKTWYGV-PGHHALQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTIF 289 (499)
Q Consensus 211 p~lyiGm~~S~f~WH~ED~~l~SiNy~H~GapK~WY~V-P~~~~~kfe~l~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~ 289 (499)
+.+|+|-.++.+..|...++ .+..+-.| .|.|... |+..... ++.... ... .....+......--+
T Consensus 143 ~~~~~gp~g~~~~~H~D~~d--nfl~Qv~G-~Krw~L~~~P~~~~~--------l~~~~~-~~~-~~~~~~~~~~~~~~~ 209 (342)
T 1vrb_A 143 AIVYAAKNGGGFKAHFDAYT--NLIFQIQG-EKTWKLAKNENVSNP--------MQHYDL-SEA-PYYPDDLQSYWKGDP 209 (342)
T ss_dssp EEEEEECSSCCCCSEECSSE--EEEEEEES-CEEEEEECCSSCSSC--------SSCEEC-C-----CCHHHHHHCCSCC
T ss_pred ceEEEeCCCCCCCCeECChh--cEEEEEEE-EEEEEEecCCccccc--------cCcccc-ccc-ccccccccccchhhc
Confidence 44899988899999997765 33334456 7999999 7764211 110000 000 000000000000000
Q ss_pred ChhhHhhCCCceEEeeeCCCcEEEEcCCceeeeeecc--cceeeeecccccccccchHHHHH
Q 043353 290 PPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFSNG--FNCGEAVNFAIRDWFPFGEEAGK 349 (499)
Q Consensus 290 ~P~~L~~~gIpv~r~~Q~pGefVvtfP~aYH~gfn~G--fn~aEavNfa~~~Wl~~g~~a~~ 349 (499)
|. + ...+.+.++-+|||.++.-+|..|.+.+.| -+++-+++ .++|..+...+..
T Consensus 210 -p~-~--~~~~~~~~~L~pGD~LyiP~gwwH~v~s~~~~~slsvsi~--~~~~~dll~~~l~ 265 (342)
T 1vrb_A 210 -PK-E--DLPDAEIVNLTPGTMLYLPRGLWHSTKSDQATLALNITFG--QPAWLDLMLAALR 265 (342)
T ss_dssp -CC-T--TCCSSEEEEECTTCEEEECTTCEEEEECSSCEEEEEEEEC--CCBHHHHHHHHHH
T ss_pred -cc-c--ccCCceEEEECCCcEEEeCCCccEEEEECCCCceEEEEEC--CCcHHHHHHHHHH
Confidence 11 1 226789999999999999999999999994 57777777 7789877665543
No 20
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=74.62 E-value=11 Score=40.09 Aligned_cols=106 Identities=19% Similarity=0.206 Sum_probs=73.5
Q ss_pred cceEEeecccc-ccceeecCCCceeEEEEeeCCCceEEeeCCchHHHHHHHHHhhccchhhhhhcCCCChhhhhcccccc
Q 043353 210 DPMLYIGMLFS-MFAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQVYSRDILSAAGEDGAFEVIAEKTTI 288 (499)
Q Consensus 210 ~p~lyiGm~~S-~f~WH~ED~~l~SiNy~H~GapK~WY~VP~~~~~kfe~l~~~~~~~~~l~~~~~~~~~~~~l~~~~~~ 288 (499)
.-.+|++-.+| .|..|..+++. +..+-.| .|.|...++.+... ..+. . .. .-
T Consensus 165 ~~N~Y~tp~Gs~g~~pH~D~~Dv--FllQv~G-~KrWrL~~P~~~~~-------~lp~---------~------~~--~~ 217 (489)
T 4diq_A 165 GSNVYLTPPNSQGFAPHYDDIEA--FVLQLEG-RKLWRVYRPRAPTE-------ELAL---------T------SS--PN 217 (489)
T ss_dssp EEEEEEECSSBCCSCCBCCSSEE--EEEEEEE-CEEEEEECCSSGGG-------TTCS---------S------CC--CC
T ss_pred cceEEecCCCcccccCccCCcce--EEEEEee-EEEEEEeCCCCccc-------cCCC---------c------cc--cc
Confidence 34589998887 46889999864 4455566 69999999886431 1110 0 00 01
Q ss_pred cChhhHhhCCCceEEeeeCCCcEEEEcCCceeeeeecc--cceeeeeccc-ccccccchH
Q 043353 289 FPPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFSNG--FNCGEAVNFA-IRDWFPFGE 345 (499)
Q Consensus 289 ~~P~~L~~~gIpv~r~~Q~pGefVvtfP~aYH~gfn~G--fn~aEavNfa-~~~Wl~~g~ 345 (499)
+.+. +.+-|++.++-+|||.+++-||..|.+.+.+ +++.-++.+. +.+|.++-.
T Consensus 218 ~~~~---~~~~p~~e~~L~pGDvLYiP~g~~H~~~s~~~~~SlhlTi~~~~~~tw~dll~ 274 (489)
T 4diq_A 218 FSQD---DLGEPVLQTVLEPGDLLYFPRGFIHQAECQDGVHSLHLTLSTYQRNTWGDFLE 274 (489)
T ss_dssp CCGG---GCCCCSEEEEECTTCEEEECTTCEEEEEBCSSCCEEEEEEEECTTCBHHHHHH
T ss_pred CCcc---cccCcceEEEECCCCEEEECCCCceEEEecCCCceEEEeecccCcccHHHHHH
Confidence 2222 2367899999999999999999999999984 6777666664 367876544
No 21
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=50.27 E-value=63 Score=33.70 Aligned_cols=105 Identities=17% Similarity=0.179 Sum_probs=66.4
Q ss_pred CccceEEeeccccc-cceeecCCCceeEEEEeeCCCceEEeeCCchHHHHHHHHHhhccchhhhhhcCCCChhhhhcccc
Q 043353 208 ITDPMLYIGMLFSM-FAWHVEDHYLHSINYHHSGAPKTWYGVPGHHALQFEKVARNQVYSRDILSAAGEDGAFEVIAEKT 286 (499)
Q Consensus 208 v~~p~lyiGm~~S~-f~WH~ED~~l~SiNy~H~GapK~WY~VP~~~~~kfe~l~~~~~~~~~l~~~~~~~~~~~~l~~~~ 286 (499)
.....+|+|-.++. |..|..+++. +..+-.| .|.|...|+..- ++. . ...+
T Consensus 138 ~~~~n~y~~~~g~~g~~~H~D~~dv--f~~Qv~G-~Krw~l~~p~~p----------l~~------~---~s~d------ 189 (442)
T 2xdv_A 138 LVGSNVYITPAGSQGLPPHYDDVEV--FILQLEG-EKHWRLYHPTVP----------LAR------E---YSVE------ 189 (442)
T ss_dssp CCEEEEEEECTTCBCSCSEECSSEE--EEEEEES-CEEEEEECCSST----------TCS------S---CEEC------
T ss_pred CcccceEECCCCCCCccceECCcce--EEEEEEe-EEEEEEccCCCC----------ccc------c---CCCC------
Confidence 34577899998875 5899976643 3334455 799999998740 110 0 0000
Q ss_pred cccChhhHhhCCCceEEeeeCCCcEEEEcCCceeeeeecc-cceeeeecc---cccccccchHH
Q 043353 287 TIFPPKILLDNGVSVYKAVQKPGEFVITFPRVYHAGFSNG-FNCGEAVNF---AIRDWFPFGEE 346 (499)
Q Consensus 287 ~~~~P~~L~~~gIpv~r~~Q~pGefVvtfP~aYH~gfn~G-fn~aEavNf---a~~~Wl~~g~~ 346 (499)
.|+ +.|-+.+.++-+|||.++.-||..|.+.+.+ -..+..+.+ ....|.++-.+
T Consensus 190 ---~~~---~~~~~~~~~~L~pGD~LYiP~g~~H~~~s~~~~~~SlhlT~~~~~~~~w~~~l~~ 247 (442)
T 2xdv_A 190 ---AEE---RIGRPVHEFMLKPGDLLYFPRGTIHQADTPAGLAHSTHVTISTYQNNSWGDFLLD 247 (442)
T ss_dssp ---CTT---TSCSCSEEEEECTTCEEEECTTCEEEEECCSSSCCEEEEEEEECTTCSHHHHHHH
T ss_pred ---chh---hcCCcceEEEECCCcEEEECCCceEEEEecCCCcceeeccccccccchHHHHHHH
Confidence 111 2356788999999999999999999999875 222222222 33667765443
No 22
>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=47.40 E-value=9.9 Score=29.23 Aligned_cols=40 Identities=18% Similarity=0.466 Sum_probs=29.8
Q ss_pred ccccccccccceeeEEEeeccCCceeecccccccccCCCCCC
Q 043353 415 GSFVCDLCKRDCYLAFTECKSCQRYTCLFHEFKSRHCSCGYN 456 (499)
Q Consensus 415 ~~~~C~~C~~~~fls~v~c~c~~~~~CL~H~~~~~~c~c~~~ 456 (499)
....|..|+.-+-|..+.|.| ...+|..|-. .....|.-+
T Consensus 14 ~~~rC~~C~kkvgl~~f~CrC-g~~FC~~HRy-~e~H~C~fD 53 (64)
T 1wfh_A 14 RPNRCTVCRKRVGLTGFMCRC-GTTFCGSHRY-PEVHGCTFD 53 (64)
T ss_dssp SCCCCTTTCCCCCTTCEECSS-SCEECTTTCS-TTTTTCCCC
T ss_pred cCCcChhhCCccCccCEEeec-CCEeccccCC-cccCCCCch
Confidence 456799999998888899975 5599999943 344566633
No 23
>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=43.35 E-value=12 Score=28.72 Aligned_cols=40 Identities=18% Similarity=0.420 Sum_probs=29.6
Q ss_pred ccccccccccceeeEEEeeccCCceeecccccccccCCCCCC
Q 043353 415 GSFVCDLCKRDCYLAFTECKSCQRYTCLFHEFKSRHCSCGYN 456 (499)
Q Consensus 415 ~~~~C~~C~~~~fls~v~c~c~~~~~CL~H~~~~~~c~c~~~ 456 (499)
....|..|+.-+-|..+.|.| ...+|..|-. .....|.-+
T Consensus 14 ~~~rC~~C~kkvgl~~f~CrC-g~~FC~~HR~-~e~H~C~fD 53 (64)
T 1wg2_A 14 PNNRCFSCNKKVGVMGFKCKC-GSTFCGSHRY-PEKHECSFD 53 (64)
T ss_dssp CSCSCTTTCCCCTTSCEECTT-SCEECSSSCS-STTTTCCCC
T ss_pred cCCcChhhCCcccccCeEeec-CCEecccCCC-ccccCCCcc
Confidence 356799999998888899965 5599999943 344566633
No 24
>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=39.27 E-value=19 Score=28.41 Aligned_cols=39 Identities=15% Similarity=0.381 Sum_probs=29.5
Q ss_pred cccccccccccceeeEEEeeccCCceeecccccccccCCCC
Q 043353 414 QGSFVCDLCKRDCYLAFTECKSCQRYTCLFHEFKSRHCSCG 454 (499)
Q Consensus 414 ~~~~~C~~C~~~~fls~v~c~c~~~~~CL~H~~~~~~c~c~ 454 (499)
.....|..|+.-+-|..+.|.| ...+|..|-. .....|.
T Consensus 23 ~~~~RC~~C~kkvgL~~f~CrC-g~~FCs~HRy-~e~H~C~ 61 (74)
T 1wfp_A 23 STATRCLSCNKKVGVTGFKCRC-GSTFCGTHRY-PESHECQ 61 (74)
T ss_dssp CCCCBCSSSCCBCTTTCEECTT-SCEECTTTCS-TTTSCCC
T ss_pred ccCccchhhcCcccccceEecc-CCEeccccCC-CcCCCCc
Confidence 3457899999999888899975 5599999953 3345565
No 25
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=31.90 E-value=60 Score=25.96 Aligned_cols=24 Identities=21% Similarity=0.245 Sum_probs=21.6
Q ss_pred EeeeCCCcEEEEcCCceeeeeecc
Q 043353 303 KAVQKPGEFVITFPRVYHAGFSNG 326 (499)
Q Consensus 303 r~~Q~pGefVvtfP~aYH~gfn~G 326 (499)
...-.||++++.-|+.-|...|.|
T Consensus 73 ~~~l~~Gd~~~ip~~~~H~~~~~~ 96 (116)
T 2pfw_A 73 IKVLTAGDSFFVPPHVDHGAVCPT 96 (116)
T ss_dssp EEEECTTCEEEECTTCCEEEEESS
T ss_pred EEEeCCCCEEEECcCCceeeEeCC
Confidence 456789999999999999999998
No 26
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=31.30 E-value=55 Score=25.75 Aligned_cols=38 Identities=16% Similarity=0.023 Sum_probs=28.2
Q ss_pred EeeeCCCcEEEEcCCceeeeeecccceeeeeccccccc
Q 043353 303 KAVQKPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDW 340 (499)
Q Consensus 303 r~~Q~pGefVvtfP~aYH~gfn~Gfn~aEavNfa~~~W 340 (499)
...-.||++++.-|+..|...|.|-.-...+.+..+.+
T Consensus 63 ~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~v~~~~~ 100 (113)
T 2gu9_A 63 TQALQAGSLIAIERGQAHEIRNTGDTPLKTVNFYHPPA 100 (113)
T ss_dssp EEEECTTEEEEECTTCCEEEECCSSSCEEEEEEEESCC
T ss_pred EEEeCCCCEEEECCCCcEEeEcCCCCCEEEEEEECCCC
Confidence 34568999999999999999998865555555544433
No 27
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=30.26 E-value=44 Score=30.91 Aligned_cols=46 Identities=15% Similarity=0.226 Sum_probs=33.2
Q ss_pred eEEeeeCCCcEEEEcCCceeeeeecccceeeee--cccccccccchHH
Q 043353 301 VYKAVQKPGEFVITFPRVYHAGFSNGFNCGEAV--NFAIRDWFPFGEE 346 (499)
Q Consensus 301 v~r~~Q~pGefVvtfP~aYH~gfn~Gfn~aEav--Nfa~~~Wl~~g~~ 346 (499)
++++.=+||++|++-||.+|+-.+..-+...++ --..+.|.++.+.
T Consensus 126 ~~~i~v~~GDlIiIPaG~~H~f~~~~~~~~~airlF~~~~~W~~~~r~ 173 (191)
T 1vr3_A 126 WIRISMEKGDMITLPAGIYHRFTLDEKNYVKAMRLFVGEPVWTPYNRP 173 (191)
T ss_dssp EEEEEEETTEEEEECTTCCEEEEECTTCCEEEEEEESSSCCCCCEESC
T ss_pred EEEEEECCCCEEEECcCCcCCcccCCCCCEEEEEEECCCCCccCCCCc
Confidence 556677899999999999998665444433333 4467899987553
No 28
>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=29.80 E-value=28 Score=28.20 Aligned_cols=38 Identities=26% Similarity=0.480 Sum_probs=28.8
Q ss_pred ccccccccccceeeE-EEeeccCCceeecccccccccCCCC
Q 043353 415 GSFVCDLCKRDCYLA-FTECKSCQRYTCLFHEFKSRHCSCG 454 (499)
Q Consensus 415 ~~~~C~~C~~~~fls-~v~c~c~~~~~CL~H~~~~~~c~c~ 454 (499)
....|..|+.-+-|. .+.|.| ...+|..|-. .....|.
T Consensus 24 ~~~rC~~C~kkvgl~~~f~CrC-g~~FC~~HRy-~e~H~C~ 62 (85)
T 1wff_A 24 IMKHCFLCGKKTGLATSFECRC-GNNFCASHRY-AEAHGCN 62 (85)
T ss_dssp CCCBCSSSCCBCSSSSCEECTT-CCEECTTTCS-TGGGTCC
T ss_pred cCccchhhCCeecccCCeEcCC-CCEecccCCC-ccCCCCc
Confidence 456899999998885 899985 5699999953 3345565
No 29
>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=27.35 E-value=33 Score=27.07 Aligned_cols=38 Identities=21% Similarity=0.527 Sum_probs=28.7
Q ss_pred ccccccccccceeeEEEeeccCCceeecccccccccCCCC
Q 043353 415 GSFVCDLCKRDCYLAFTECKSCQRYTCLFHEFKSRHCSCG 454 (499)
Q Consensus 415 ~~~~C~~C~~~~fls~v~c~c~~~~~CL~H~~~~~~c~c~ 454 (499)
....|..|+.-+=|..+.|.|. ..+|..|-. .....|.
T Consensus 24 ~~nRC~~CrKkvgL~gf~CrCg-~~FCs~HRy-~e~H~C~ 61 (74)
T 1wfl_A 24 KKNRCFMCRKKVGLTGFDCRCG-NLFCGLHRY-SDKHNCP 61 (74)
T ss_dssp CTTBCSSSCCBCGGGCEECTTS-CEECSSSCS-TTTTTCC
T ss_pred cCCcChhhCCcccccCeecCCC-CEechhcCC-CccCCCc
Confidence 3467999999888888999954 699999943 3345565
No 30
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=25.71 E-value=62 Score=26.11 Aligned_cols=30 Identities=17% Similarity=-0.153 Sum_probs=23.4
Q ss_pred eeCCCcEEEEcCCceeeeeecccceeeeec
Q 043353 305 VQKPGEFVITFPRVYHAGFSNGFNCGEAVN 334 (499)
Q Consensus 305 ~Q~pGefVvtfP~aYH~gfn~Gfn~aEavN 334 (499)
.-.||++++.-|+.-|+..|.|-.-.+.+.
T Consensus 69 ~l~~Gd~i~ip~~~~H~~~~~~~~~~~~l~ 98 (117)
T 2b8m_A 69 NYKEGNIVYVPFNVKMLIQNINSDILEFFV 98 (117)
T ss_dssp EEETTCEEEECTTCEEEEECCSSSEEEEEE
T ss_pred EeCCCCEEEECCCCcEEeEcCCCCCEEEEE
Confidence 347899999999999999998865444433
No 31
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=23.28 E-value=92 Score=28.10 Aligned_cols=40 Identities=18% Similarity=-0.019 Sum_probs=31.6
Q ss_pred eEEeeeCCCcEEEEcCCceeeeeecccceeeeeccccccc
Q 043353 301 VYKAVQKPGEFVITFPRVYHAGFSNGFNCGEAVNFAIRDW 340 (499)
Q Consensus 301 v~r~~Q~pGefVvtfP~aYH~gfn~Gfn~aEavNfa~~~W 340 (499)
+....=+||+.|++-|+..|...|.|-.-...+.+.++.+
T Consensus 118 ~~~~~l~~GD~v~ip~g~~H~~~N~g~~~~~~l~v~~~~~ 157 (190)
T 1x82_A 118 AKWISMEPGTVVYVPPYWAHRTVNIGDEPFIFLAIYPADA 157 (190)
T ss_dssp EEEEEECTTCEEEECTTCEEEEEECSSSCEEEEEEEETTC
T ss_pred EEEEEECCCcEEEECCCCeEEEEECCcccEEEEEEECCCc
Confidence 4556779999999999999999999976556666655554
No 32
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=23.00 E-value=66 Score=29.34 Aligned_cols=24 Identities=17% Similarity=-0.004 Sum_probs=22.2
Q ss_pred eEEeeeCCCcEEEEcCCceeeeee
Q 043353 301 VYKAVQKPGEFVITFPRVYHAGFS 324 (499)
Q Consensus 301 v~r~~Q~pGefVvtfP~aYH~gfn 324 (499)
-..++.+|||.|.+-||++|+-.+
T Consensus 118 ~~~i~L~pGesvtIppg~~H~f~a 141 (175)
T 2y0o_A 118 WHEIELEPGGQYTIPPNTKHWFQA 141 (175)
T ss_dssp CEEEEECTTCEEEECTTCCEEEEE
T ss_pred CcEEEECCCCEEEECCCCcEEEEe
Confidence 477899999999999999999988
No 33
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=22.51 E-value=50 Score=26.99 Aligned_cols=32 Identities=22% Similarity=0.225 Sum_probs=24.5
Q ss_pred eeeCCCcEEEEcCCceeeeeecccceeeeecc
Q 043353 304 AVQKPGEFVITFPRVYHAGFSNGFNCGEAVNF 335 (499)
Q Consensus 304 ~~Q~pGefVvtfP~aYH~gfn~Gfn~aEavNf 335 (499)
..=+||++++.-|++.|+..|.|-.-+..+.+
T Consensus 81 ~~l~~Gd~~~i~~~~~H~~~n~~~~~~~~l~v 112 (125)
T 3h8u_A 81 THLKAGDIAIAKPGQVHGAMNSGPEPFIFVSV 112 (125)
T ss_dssp EEEETTEEEEECTTCCCEEEECSSSCEEEEEE
T ss_pred EEeCCCCEEEECCCCEEEeEeCCCCCEEEEEE
Confidence 34479999999999999999988654444433
No 34
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=22.02 E-value=98 Score=23.61 Aligned_cols=32 Identities=13% Similarity=0.016 Sum_probs=24.2
Q ss_pred EeeeCCCcEEEEcCCceeeeeecccceeeeec
Q 043353 303 KAVQKPGEFVITFPRVYHAGFSNGFNCGEAVN 334 (499)
Q Consensus 303 r~~Q~pGefVvtfP~aYH~gfn~Gfn~aEavN 334 (499)
...=.||++++.-|+..|...|.|-.-+..+.
T Consensus 68 ~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~~~ 99 (105)
T 1v70_A 68 EALLAPGMAAFAPAGAPHGVRNESASPALLLV 99 (105)
T ss_dssp EEEECTTCEEEECTTSCEEEECCSSSCEEEEE
T ss_pred EEEeCCCCEEEECCCCcEEeEeCCCCCEEEEE
Confidence 34558999999999999999998754344333
No 35
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=20.26 E-value=70 Score=29.09 Aligned_cols=43 Identities=9% Similarity=-0.004 Sum_probs=29.7
Q ss_pred eEEeeeCCCcEEEEcCCceeeeeecccceeeee--cccccccccc
Q 043353 301 VYKAVQKPGEFVITFPRVYHAGFSNGFNCGEAV--NFAIRDWFPF 343 (499)
Q Consensus 301 v~r~~Q~pGefVvtfP~aYH~gfn~Gfn~aEav--Nfa~~~Wl~~ 343 (499)
++++.=++|++|++-||.+|+-.+.+-+...++ --.++.|++.
T Consensus 121 ~~~~~l~~GDli~IP~g~~H~~~~~~~~~~~~ir~F~~~~~w~~~ 165 (179)
T 1zrr_A 121 VFQVLCEKNDLISVPAHTPHWFDMGSEPNFTAIRIFDNPEGWIAQ 165 (179)
T ss_dssp EEEEECCCSCEEEECTTCCBCCCCSSCSSCEEEEEECCGGGEESC
T ss_pred EEEEEECCCCEEEECCCCeEeeecCCCceEEEEEeccCCCCcccc
Confidence 456667999999999999999665444333333 2245788764
No 36
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=20.20 E-value=67 Score=28.40 Aligned_cols=24 Identities=21% Similarity=0.303 Sum_probs=21.1
Q ss_pred EeeeCCCcEEEEcCCceeeeeecc
Q 043353 303 KAVQKPGEFVITFPRVYHAGFSNG 326 (499)
Q Consensus 303 r~~Q~pGefVvtfP~aYH~gfn~G 326 (499)
...-.||++|++-|+..|+..|.|
T Consensus 95 ~~~l~~Gd~i~ip~~~~H~~~n~~ 118 (167)
T 3ibm_A 95 VEPLTPLDCVYIAPHAWHQIHATG 118 (167)
T ss_dssp EEEECTTCEEEECTTCCEEEEEES
T ss_pred EEEECCCCEEEECCCCcEEEEeCC
Confidence 345589999999999999999988
Done!