BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>043364
MCRDGNDVVLPIAFCEVQEENLDSWAFFLKNLTYGLRFERGEGLCILADGDNGVDEAVEE
FLPYGVYRQCCFSLYGRMVVKFPDVQLHSAFWGACRSTDRKSFIHHMSIIETVNIECHNW
LKDTDSKTWALFSMPQWVKSTEVTKSSSEQLRIWLSKFLDLNVAQRYTTITRTIAEMFQR
RYLAGWEWVYDKITPAARQQIIHNVFESDGWNVDMPSNNAVSFVSRHGFVFEVNRELMTC
SCRLWQLSGIPCEHACRCIHSWGDKLDKYVHRLWSVDEYRSAYGPGMQMLREITHWEWQT
KDNVLQPMKNSTNSSASNEANCHSKVTTLNDIFPY

High Scoring Gene Products

Symbol, full name Information P value
AT1G49920 protein from Arabidopsis thaliana 0.00025
AT1G64260 protein from Arabidopsis thaliana 0.00049

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  043364
        (335 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2197122 - symbol:AT1G49920 "AT1G49920" species...   122  0.00025   1
TAIR|locus:2014230 - symbol:AT1G64260 "AT1G64260" species...   119  0.00049   1


>TAIR|locus:2197122 [details] [associations]
            symbol:AT1G49920 "AT1G49920" species:3702 "Arabidopsis
            thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
            evidence=IEA] InterPro:IPR006564 InterPro:IPR007527 Pfam:PF04434
            PROSITE:PS50966 SMART:SM00575 InterPro:IPR004332 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0008270 InterPro:IPR018289
            Pfam:PF10551 Pfam:PF03108 EMBL:AC074110 IPI:IPI00531525
            RefSeq:NP_175414.1 UniGene:At.52103 EnsemblPlants:AT1G49920.1
            GeneID:841415 KEGG:ath:AT1G49920 TAIR:At1g49920 eggNOG:NOG303426
            HOGENOM:HOG000152182 InParanoid:Q9C702 OMA:ISESHTC PhylomeDB:Q9C702
            ProtClustDB:CLSN2682695 Genevestigator:Q9C702 Uniprot:Q9C702
        Length = 785

 Score = 122 (48.0 bits), Expect = 0.00025, P = 0.00025
 Identities = 33/135 (24%), Positives = 60/135 (44%)

Query:     4 DGNDVVLPIAFCEVQEENLDSWAFFLKNLTYGLRFERGEGLCILADGDNGVDEAVEE--- 60
             D  +   P+AF   +E ++DSW +FL  +    +  + +G+C+++  D  +   + E   
Sbjct:   404 DATNQYFPLAFAVTKEVSVDSWRWFLTRIRE--KVTQRQGICLISSPDPDILAVINEPGS 461

Query:    61 --FLPYGVYRQCCFSLYGRMVVKFP--DVQLHSAFWGACRSTDRKSFIHHMSIIETVNIE 116
                 P+  +R C + L  ++    P  D  +H     A  S+ ++ F  +M  I+  N E
Sbjct:   462 QWKEPWAYHRFCLYHLCSKLCSVSPGFDYNMHFLVDEAGSSSQKEEFDSYMKEIKERNPE 521

Query:   117 CHNWLKDTDSKTWAL 131
                WL       WAL
Sbjct:   522 AWKWLDQFPPHQWAL 536


>TAIR|locus:2014230 [details] [associations]
            symbol:AT1G64260 "AT1G64260" species:3702 "Arabidopsis
            thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
            evidence=IEA] InterPro:IPR006564 InterPro:IPR007527 Pfam:PF04434
            PROSITE:PS50966 SMART:SM00575 InterPro:IPR004332 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0008270 EMBL:AC066689
            InterPro:IPR018289 Pfam:PF10551 Pfam:PF03108 eggNOG:NOG303426
            HOGENOM:HOG000152182 ProtClustDB:CLSN2682695 IPI:IPI00526445
            RefSeq:NP_176608.2 UniGene:At.66093 EnsemblPlants:AT1G64260.1
            GeneID:842731 KEGG:ath:AT1G64260 TAIR:At1g64260 InParanoid:Q9C7V1
            OMA:HDHELGL PhylomeDB:Q9C7V1 Genevestigator:Q9C7V1 Uniprot:Q9C7V1
        Length = 719

 Score = 119 (46.9 bits), Expect = 0.00049, P = 0.00049
 Identities = 62/312 (19%), Positives = 121/312 (38%)

Query:     4 DGNDVVLPIAFCEVQEENLDSWAFFLKNLTYGLRFERGEGLCILADGDNGVDEAVEE--F 61
             D  +   P+AF   +E + DSW +F   +    +  + + LC+++     +   V E   
Sbjct:   401 DAANKFFPLAFAVTKEVSTDSWRWFFTKIRE--KVTQRKDLCLISSPLRDIVAVVNEPGS 458

Query:    62 L---PYGVYRQCCFSLYGRMVVKFPDVQLHSAFWGACRSTDRKSFIHHMSIIETVNIECH 118
             L   P+  ++ C   L  + +  F D  L S    A  +  ++ F  +M+ I+  N E  
Sbjct:   459 LWQEPWAHHKFCLNHLRSQFLGVFRDYNLESLVEQAGSTNQKEEFDSYMNDIKEKNPEAW 518

Query:   119 NWLKDTDSKTWALFSMPQWVKSTEVTKSSSEQLRIWLSKFLDLNVA----------QRYT 168
              WL       WAL +    ++   + +   E L      F    VA          +  +
Sbjct:   519 KWLDQIPRHKWAL-AHDSGLRYG-IIEIDREALFAVCRGFPYCTVAMTGGVMLMFDELRS 576

Query:   169 TITRTIAEMFQ--RRYLAGWEWVYDKITPAARQQIIHNV--FESDGWNVDMPSNNAVSFV 224
             +  ++++ ++    R +   E   DK+       I + +   E D + V   S       
Sbjct:   577 SFDKSLSSIYSSLNRGVVYTEPFMDKLEEFMTDSIPYVITQLERDSFKVSESSE------ 630

Query:   225 SRHGFVFEVNRELMTCSCRLWQLSGIPCEHACRCIHSWGDKLDKYVHRLWSVDEYRSAYG 284
              +  ++ ++N  + TC+CR +Q    PC HA            +YV   ++V++Y   Y 
Sbjct:   631 -KEEWIVQLN--VSTCTCRKFQSYKFPCLHALAVFEKLKINPLQYVDECYTVEQYCKTYA 687

Query:   285 PGMQMLREITHW 296
                  + ++  W
Sbjct:   688 ATFSPVPDVAAW 699


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.136   0.460    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      335       323   0.00086  116 3  11 22  0.47    33
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  625 (66 KB)
  Total size of DFA:  289 KB (2147 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  26.45u 0.11s 26.56t   Elapsed:  00:00:01
  Total cpu time:  26.45u 0.11s 26.56t   Elapsed:  00:00:01
  Start:  Thu May  9 23:21:31 2013   End:  Thu May  9 23:21:32 2013

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