BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043369
(526 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2EIC|A Chain A, Crystal Structure Of Galactose Oxidase Mutant W290f
Length = 639
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 104/457 (22%), Positives = 169/457 (36%), Gaps = 55/457 (12%)
Query: 89 EFDPITRKVRPLTI---QTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDW-- 143
+DP T V T+ + D +C ++ NG +V TGG + L S W
Sbjct: 206 SWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGG---NDAKKTSLYDSSSDSWIP 262
Query: 144 EEDHQNGLISPRWYASNQILPNGKIIVVGGRFQF-TYEFIPRTSDSDRKILYQLPFLKET 202
D Q R Y S+ + +G++ +GG F +E K LP K
Sbjct: 263 GPDMQ----VARGYQSSATMSDGRVFTIGGSFSGGVFEKNGEVYSPSSKTWTSLPNAKVN 318
Query: 203 MHSPKIPNNLYPFLHLSTDGNLFIFANDRAILLDYVNNRVMKNYPVMPGGISRNYPSTGS 262
LY +D + ++F + + + M Y G ++ S
Sbjct: 319 PMLTADKQGLY-----RSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQS 373
Query: 263 SVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTIT 322
+ + + N + + V ++L GG+ PD ++ A + G T
Sbjct: 374 NRGVAPDAMCGNAVMYD----AVKGKILTFGGS-PDYQDSDATTNAHIITLGEPG----T 424
Query: 323 AQNPKWEMEEMPLNRVMGDMILLPTGDVLIINXXXXXXXXXXXXREPVLNPVIYCPKINR 382
+ N + + R ++LP G I PV P IY P+ +
Sbjct: 425 SPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDST--PVFTPEIYVPEQDT 482
Query: 383 FRILSPSLIPRLYHSTAHLLSDGRVLVGGSN--PNVNYNFSALFPTELSLQAFYPPY-FN 439
F +P+ I R+YHS + LL DGRV GG + N Q F P Y +N
Sbjct: 483 FYKQNPNSIVRVYHSISLLLPDGRVFNGGGGLCGDCTTN-------HFDAQIFTPNYLYN 535
Query: 440 LMSN-RSRPSIS-----TVKPGAFLKLKYTENFLLGFKLRSG--------DLGEIFVTMV 485
N +RP I+ +VK G + + + +R G D I +T+
Sbjct: 536 SNGNLATRPKITRTSTQSVKVGGRITISTDSSISKASLIRYGTATHTVNTDQRRIPLTLT 595
Query: 486 APSFTTHSFAM-NQRLLVLELHGALFLVND-GVPSKA 520
++SF + + + L + LF++N GVPS A
Sbjct: 596 NNGGNSYSFQVPSDSGVALPGYWMLFVMNSAGVPSVA 632
>pdb|1T2X|A Chain A, Glactose Oxidase C383s Mutant Identified By Directed
Evolution
Length = 639
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 104/457 (22%), Positives = 170/457 (37%), Gaps = 55/457 (12%)
Query: 89 EFDPITRKVRPLTI---QTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDW-- 143
+DP T V T+ + D +C ++ NG +V TGG + L S W
Sbjct: 206 SWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGG---NDAKKTSLYDSSSDSWIP 262
Query: 144 EEDHQNGLISPRWYASNQILPNGKIIVVGGRFQF-TYEFIPRTSDSDRKILYQLPFLKET 202
D Q R Y S+ + +G++ +GG + +E K LP K
Sbjct: 263 GPDMQ----VARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVN 318
Query: 203 MHSPKIPNNLYPFLHLSTDGNLFIFANDRAILLDYVNNRVMKNYPVMPGGISRNYPSTGS 262
LY +D + ++F + + + M Y G ++ S
Sbjct: 319 PMLTADKQGLY-----RSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQS 373
Query: 263 SVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTIT 322
+ + + S N + + V ++L GG+ PD ++ A + G T
Sbjct: 374 NRGVAPDAMSGNAVMYD----AVKGKILTFGGS-PDYQDSDATTNAHIITLGEPG----T 424
Query: 323 AQNPKWEMEEMPLNRVMGDMILLPTGDVLIINXXXXXXXXXXXXREPVLNPVIYCPKINR 382
+ N + + R ++LP G I PV P IY P+ +
Sbjct: 425 SPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDST--PVFTPEIYVPEQDT 482
Query: 383 FRILSPSLIPRLYHSTAHLLSDGRVLVGGSN--PNVNYNFSALFPTELSLQAFYPPY-FN 439
F +P+ I R+YHS + LL DGRV GG + N Q F P Y +N
Sbjct: 483 FYKQNPNSIVRVYHSISLLLPDGRVFNGGGGLCGDCTTN-------HFDAQIFTPNYLYN 535
Query: 440 LMSN-RSRPSIS-----TVKPGAFLKLKYTENFLLGFKLRSG--------DLGEIFVTMV 485
N +RP I+ +VK G + + + +R G D I +T+
Sbjct: 536 SNGNLATRPKITRTSTQSVKVGGRITISTDSSISKASLIRYGTATHTVNTDQRRIPLTLT 595
Query: 486 APSFTTHSFAM-NQRLLVLELHGALFLVND-GVPSKA 520
++SF + + + L + LF++N GVPS A
Sbjct: 596 NNGGNSYSFQVPSDSGVALPGYWMLFVMNSAGVPSVA 632
>pdb|2WQ8|A Chain A, Glycan Labelling Using Engineered Variants Of Galactose
Oxidase Obtained By Directed Evolution
Length = 661
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 103/457 (22%), Positives = 166/457 (36%), Gaps = 55/457 (12%)
Query: 89 EFDPITRKVRPLTI---QTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDW-- 143
+DP T V T+ + D +C ++ NG +V TGG + L S W
Sbjct: 228 SWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGG---NDAKKTSLYDSSSDSWIP 284
Query: 144 EEDHQNGLISPRWYASNQILPNGKIIVVGGRFQF-TYEFIPRTSDSDRKILYQLPFLKET 202
D Q R Y S+ + +G++ +GG F +E K LP K
Sbjct: 285 GPDMQ----VARGYQSSATMSDGRVFTIGGSFSGGVFEKNGEVYSPSSKTWTSLPNAKVN 340
Query: 203 MHSPKIPNNLYPFLHLSTDGNLFIFANDRAILLDYVNNRVMKNYPVMPGGISRNYPSTGS 262
LY +D + ++F + + + M Y G ++ S
Sbjct: 341 PMLTADKQGLY-----KSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQS 395
Query: 263 SVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTIT 322
+ + + N + + V ++L GG+ PD ++ A + G T
Sbjct: 396 NRGVAPDAMCGNAVMYD----AVKGKILTFGGS-PDYTDSDATTNAHIITLGEPG----T 446
Query: 323 AQNPKWEMEEMPLNRVMGDMILLPTGDVLIINXXXXXXXXXXXXREPVLNPVIYCPKINR 382
+ N + + R ++LP G I PV P IY P+ +
Sbjct: 447 SPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIIFEDST--PVFTPEIYVPEQDT 504
Query: 383 FRILSPSLIPRLYHSTAHLLSDGRVLVGGSN--PNVNYNFSALFPTELSLQAFYPPYF-- 438
F +P+ I R YHS + LL DGRV GG + N Q F P Y
Sbjct: 505 FYKQNPNSIVRAYHSISLLLPDGRVFNGGGGLCGDCTTN-------HFDAQIFTPNYLYD 557
Query: 439 ---NLMSNR--SRPSISTVKPGAFLKLKYTENFLLGFKLRSG--------DLGEIFVTMV 485
NL + +R S +VK G + + + +R G D I +T+
Sbjct: 558 SNGNLATRPKITRTSTQSVKVGGRITISTDSSISKASLIRYGTATHTVNTDQRRIPLTLT 617
Query: 486 APSFTTHSFAM-NQRLLVLELHGALFLVND-GVPSKA 520
++SF + + + L + LF++N GVPS A
Sbjct: 618 NNGGNSYSFQVPSDSGVALPGYWMLFVMNSAGVPSVA 654
>pdb|2EIE|A Chain A, Crystal Structure Of Galactose Oxidase Complexed With
Azide
pdb|1GOF|A Chain A, Novel Thioether Bond Revealed By A 1.7 Angstroms Crystal
Structure Of Galactose Oxidase
pdb|1GOG|A Chain A, Novel Thioether Bond Revealed By A 1.7 Angstroms Crystal
Structure Of Galactose Oxidase
pdb|1GOH|A Chain A, Novel Thioether Bond Revealed By A 1.7 Angstroms Crystal
Structure Of Galactose Oxidase
pdb|2JKX|A Chain A, Galactose Oxidase. Matgo. Copper Free, Expressed In Pichia
Pastoris.
pdb|2VZ1|A Chain A, Premat-Galactose Oxidase
pdb|2VZ3|A Chain A, Bleached Galactose Oxidase
Length = 639
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 103/457 (22%), Positives = 169/457 (36%), Gaps = 55/457 (12%)
Query: 89 EFDPITRKVRPLTI---QTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDW-- 143
+DP T V T+ + D +C ++ NG +V TGG + L S W
Sbjct: 206 SWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGG---NDAKKTSLYDSSSDSWIP 262
Query: 144 EEDHQNGLISPRWYASNQILPNGKIIVVGGRFQF-TYEFIPRTSDSDRKILYQLPFLKET 202
D Q R Y S+ + +G++ +GG + +E K LP K
Sbjct: 263 GPDMQ----VARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVN 318
Query: 203 MHSPKIPNNLYPFLHLSTDGNLFIFANDRAILLDYVNNRVMKNYPVMPGGISRNYPSTGS 262
LY +D + ++F + + + M Y G ++ S
Sbjct: 319 PMLTADKQGLY-----RSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQS 373
Query: 263 SVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTIT 322
+ + + N + + V ++L GG+ PD ++ A + G T
Sbjct: 374 NRGVAPDAMCGNAVMYD----AVKGKILTFGGS-PDYQDSDATTNAHIITLGEPG----T 424
Query: 323 AQNPKWEMEEMPLNRVMGDMILLPTGDVLIINXXXXXXXXXXXXREPVLNPVIYCPKINR 382
+ N + + R ++LP G I PV P IY P+ +
Sbjct: 425 SPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDST--PVFTPEIYVPEQDT 482
Query: 383 FRILSPSLIPRLYHSTAHLLSDGRVLVGGSN--PNVNYNFSALFPTELSLQAFYPPY-FN 439
F +P+ I R+YHS + LL DGRV GG + N Q F P Y +N
Sbjct: 483 FYKQNPNSIVRVYHSISLLLPDGRVFNGGGGLCGDCTTN-------HFDAQIFTPNYLYN 535
Query: 440 LMSN-RSRPSIS-----TVKPGAFLKLKYTENFLLGFKLRSG--------DLGEIFVTMV 485
N +RP I+ +VK G + + + +R G D I +T+
Sbjct: 536 SNGNLATRPKITRTSTQSVKVGGRITISTDSSISKASLIRYGTATHTVNTDQRRIPLTLT 595
Query: 486 APSFTTHSFAM-NQRLLVLELHGALFLVND-GVPSKA 520
++SF + + + L + LF++N GVPS A
Sbjct: 596 NNGGNSYSFQVPSDSGVALPGYWMLFVMNSAGVPSVA 632
>pdb|2EIB|A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant
Length = 639
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 103/457 (22%), Positives = 168/457 (36%), Gaps = 55/457 (12%)
Query: 89 EFDPITRKVRPLTI---QTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDW-- 143
+DP T V T+ + D +C ++ NG +V TGG + L S W
Sbjct: 206 SWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGG---NDAKKTSLYDSSSDSWIP 262
Query: 144 EEDHQNGLISPRWYASNQILPNGKIIVVGGRFQF-TYEFIPRTSDSDRKILYQLPFLKET 202
D Q R Y S+ + +G++ +GG +E K LP K
Sbjct: 263 GPDMQ----VARGYQSSATMSDGRVFTIGGSHSGGVFEKNGEVYSPSSKTWTSLPNAKVN 318
Query: 203 MHSPKIPNNLYPFLHLSTDGNLFIFANDRAILLDYVNNRVMKNYPVMPGGISRNYPSTGS 262
LY +D + ++F + + + M Y G ++ S
Sbjct: 319 PMLTADKQGLY-----RSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQS 373
Query: 263 SVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTIT 322
+ + + N + + V ++L GG+ PD ++ A + G T
Sbjct: 374 NRGVAPDAMCGNAVMYD----AVKGKILTFGGS-PDYQDSDATTNAHIITLGEPG----T 424
Query: 323 AQNPKWEMEEMPLNRVMGDMILLPTGDVLIINXXXXXXXXXXXXREPVLNPVIYCPKINR 382
+ N + + R ++LP G I PV P IY P+ +
Sbjct: 425 SPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDST--PVFTPEIYVPEQDT 482
Query: 383 FRILSPSLIPRLYHSTAHLLSDGRVLVGGSN--PNVNYNFSALFPTELSLQAFYPPY-FN 439
F +P+ I R+YHS + LL DGRV GG + N Q F P Y +N
Sbjct: 483 FYKQNPNSIVRVYHSISLLLPDGRVFNGGGGLCGDCTTN-------HFDAQIFTPNYLYN 535
Query: 440 LMSN-RSRPSIS-----TVKPGAFLKLKYTENFLLGFKLRSG--------DLGEIFVTMV 485
N +RP I+ +VK G + + + +R G D I +T+
Sbjct: 536 SNGNLATRPKITRTSTQSVKVGGRITISTDSSISKASLIRYGTATHTVNTDQRRIPLTLT 595
Query: 486 APSFTTHSFAM-NQRLLVLELHGALFLVND-GVPSKA 520
++SF + + + L + LF++N GVPS A
Sbjct: 596 NNGGNSYSFQVPSDSGVALPGYWMLFVMNSAGVPSVA 632
>pdb|2EID|A Chain A, Galactose Oxidase W290g Mutant
Length = 639
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 103/457 (22%), Positives = 168/457 (36%), Gaps = 55/457 (12%)
Query: 89 EFDPITRKVRPLTI---QTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDW-- 143
+DP T V T+ + D +C ++ NG +V TGG + L S W
Sbjct: 206 SWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGG---NDAKKTSLYDSSSDSWIP 262
Query: 144 EEDHQNGLISPRWYASNQILPNGKIIVVGGRFQF-TYEFIPRTSDSDRKILYQLPFLKET 202
D Q R Y S+ + +G++ +GG +E K LP K
Sbjct: 263 GPDMQ----VARGYQSSATMSDGRVFTIGGSGSGGVFEKNGEVYSPSSKTWTSLPNAKVN 318
Query: 203 MHSPKIPNNLYPFLHLSTDGNLFIFANDRAILLDYVNNRVMKNYPVMPGGISRNYPSTGS 262
LY +D + ++F + + + M Y G ++ S
Sbjct: 319 PMLTADKQGLY-----RSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQS 373
Query: 263 SVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTIT 322
+ + + N + + V ++L GG+ PD ++ A + G T
Sbjct: 374 NRGVAPDAMCGNAVMYD----AVKGKILTFGGS-PDYQDSDATTNAHIITLGEPG----T 424
Query: 323 AQNPKWEMEEMPLNRVMGDMILLPTGDVLIINXXXXXXXXXXXXREPVLNPVIYCPKINR 382
+ N + + R ++LP G I PV P IY P+ +
Sbjct: 425 SPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDST--PVFTPEIYVPEQDT 482
Query: 383 FRILSPSLIPRLYHSTAHLLSDGRVLVGGSN--PNVNYNFSALFPTELSLQAFYPPY-FN 439
F +P+ I R+YHS + LL DGRV GG + N Q F P Y +N
Sbjct: 483 FYKQNPNSIVRVYHSISLLLPDGRVFNGGGGLCGDCTTN-------HFDAQIFTPNYLYN 535
Query: 440 LMSN-RSRPSIS-----TVKPGAFLKLKYTENFLLGFKLRSG--------DLGEIFVTMV 485
N +RP I+ +VK G + + + +R G D I +T+
Sbjct: 536 SNGNLATRPKITRTSTQSVKVGGRITISTDSSISKASLIRYGTATHTVNTDQRRIPLTLT 595
Query: 486 APSFTTHSFAM-NQRLLVLELHGALFLVND-GVPSKA 520
++SF + + + L + LF++N GVPS A
Sbjct: 596 NNGGNSYSFQVPSDSGVALPGYWMLFVMNSAGVPSVA 632
>pdb|1K3I|A Chain A, Crystal Structure Of The Precursor Of Galactose Oxidase
Length = 656
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 101/256 (39%), Gaps = 33/256 (12%)
Query: 284 VVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTITAQNPKWEMEEMPLNRVMGDMI 343
V ++L GG+ PD ++ A + G T+ N + + R +
Sbjct: 408 AVKGKILTFGGS-PDYQDSDATTNAHIITLGEPG----TSPNTVFASNGLYFARTFHTSV 462
Query: 344 LLPTGDVLIINXXXXXXXXXXXXREPVLNPVIYCPKINRFRILSPSLIPRLYHSTAHLLS 403
+LP G I PV P IY P+ + F +P+ I R+YHS + LL
Sbjct: 463 VLPDGSTFITGGQRRGIPFEDST--PVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLP 520
Query: 404 DGRVLVGGSN--PNVNYNFSALFPTELSLQAFYPPY-FNLMSN-RSRPSIS-----TVKP 454
DGRV GG + N Q F P Y +N N +RP I+ +VK
Sbjct: 521 DGRVFNGGGGLCGDCTTN-------HFDAQIFTPNYLYNSNGNLATRPKITRTSTQSVKV 573
Query: 455 GAFLKLKYTENFLLGFKLRSG--------DLGEIFVTMVAPSFTTHSFAM-NQRLLVLEL 505
G + + + +R G D I +T+ ++SF + + + L
Sbjct: 574 GGRITISTDSSISKASLIRYGTATHTVNTDQRRIPLTLTNNGGNSYSFQVPSDSGVALPG 633
Query: 506 HGALFLVND-GVPSKA 520
+ LF++N GVPS A
Sbjct: 634 YWMLFVMNSAGVPSVA 649
>pdb|2YWZ|A Chain A, Structure Of New Antigen Receptor Variable Domain From
Sharks
Length = 111
Score = 30.4 bits (67), Expect = 2.5, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
Query: 145 EDHQNGLISPRWYASNQILPNGKIIVVGGRFQFTYE-----FIPRTSD 187
+DH GL S WY + N K I +GGR+ T + F R SD
Sbjct: 25 KDHSCGLSSTTWYRTQLGSTNEKTISIGGRYDETVDKGSKSFSLRISD 72
>pdb|3S18|A Chain A, Crystal Structure Of A Plant Albumin From Cicer Arietinum
Showing Hemagglutination
pdb|3S18|B Chain B, Crystal Structure Of A Plant Albumin From Cicer Arietinum
Showing Hemagglutination
Length = 227
Score = 29.3 bits (64), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 15/64 (23%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Query: 190 RKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDRAILLDYVNNRVMKNYPVM 249
+KI PF K T+ N + + +++F D+ +DY+ NR+++N +
Sbjct: 102 KKIADMFPFFKGTV----FENGIDAAFRSTKGKEVYLFKGDKYARIDYLTNRLVQNKSIS 157
Query: 250 PGGI 253
G
Sbjct: 158 DTGF 161
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.138 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,999,262
Number of Sequences: 62578
Number of extensions: 672294
Number of successful extensions: 1211
Number of sequences better than 100.0: 9
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1186
Number of HSP's gapped (non-prelim): 19
length of query: 526
length of database: 14,973,337
effective HSP length: 103
effective length of query: 423
effective length of database: 8,527,803
effective search space: 3607260669
effective search space used: 3607260669
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (25.4 bits)