Query 043369
Match_columns 526
No_of_seqs 338 out of 1831
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 07:02:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043369.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043369hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1k3i_A Galactose oxidase precu 100.0 1.3E-67 4.6E-72 589.1 39.6 431 24-526 172-655 (656)
2 2xn4_A Kelch-like protein 2; s 100.0 2.1E-34 7E-39 289.6 29.3 275 44-407 10-302 (302)
3 1zgk_A Kelch-like ECH-associat 100.0 1.5E-34 5.2E-39 292.0 28.1 278 37-401 12-308 (308)
4 3ii7_A Kelch-like protein 7; p 100.0 2E-33 6.9E-38 282.9 27.4 267 49-404 11-296 (306)
5 2vpj_A Kelch-like protein 12; 100.0 5.8E-33 2E-37 278.7 26.9 269 48-401 13-299 (301)
6 1zgk_A Kelch-like ECH-associat 100.0 1.3E-31 4.4E-36 270.5 28.5 257 106-438 14-288 (308)
7 2xn4_A Kelch-like protein 2; s 100.0 2.5E-31 8.4E-36 267.1 27.3 251 114-438 13-277 (302)
8 2woz_A Kelch repeat and BTB do 100.0 8.8E-32 3E-36 272.8 24.1 264 87-412 26-315 (318)
9 4asc_A Kelch repeat and BTB do 100.0 6.2E-32 2.1E-36 273.6 21.5 263 87-413 15-306 (315)
10 3ii7_A Kelch-like protein 7; p 100.0 3.4E-31 1.2E-35 266.6 26.6 250 116-438 11-273 (306)
11 2vpj_A Kelch-like protein 12; 100.0 2.5E-30 8.5E-35 259.4 28.0 247 115-437 13-278 (301)
12 2uvk_A YJHT; unknown function, 100.0 6.1E-30 2.1E-34 263.0 24.8 262 99-416 2-328 (357)
13 4asc_A Kelch repeat and BTB do 100.0 4.4E-29 1.5E-33 252.5 22.1 251 116-438 4-278 (315)
14 2woz_A Kelch repeat and BTB do 100.0 1.1E-28 3.8E-33 249.9 23.3 251 116-438 15-288 (318)
15 1k3i_A Galactose oxidase precu 100.0 8.1E-29 2.8E-33 276.0 22.2 295 87-437 168-497 (656)
16 2uvk_A YJHT; unknown function, 100.0 4E-28 1.4E-32 249.5 24.4 284 33-390 3-352 (357)
17 2zwa_A Leucine carboxyl methyl 99.9 8E-25 2.7E-29 245.3 25.7 248 111-414 392-675 (695)
18 2zwa_A Leucine carboxyl methyl 99.9 3.5E-23 1.2E-27 232.0 22.9 255 29-357 378-675 (695)
19 3vgz_A Uncharacterized protein 98.2 0.00093 3.2E-08 66.1 28.2 248 86-413 70-334 (353)
20 4ery_A WD repeat-containing pr 97.9 0.006 2.1E-07 59.5 26.3 247 87-413 47-299 (312)
21 3dsm_A Uncharacterized protein 97.8 0.0085 2.9E-07 59.7 26.5 269 85-436 17-301 (328)
22 3no2_A Uncharacterized protein 97.7 0.0027 9.2E-08 62.1 20.4 215 116-411 4-230 (276)
23 3no2_A Uncharacterized protein 97.7 0.0099 3.4E-07 58.0 23.7 238 86-393 16-267 (276)
24 1k8k_C P40, ARP2/3 complex 41 97.7 0.005 1.7E-07 61.1 21.8 152 45-238 15-172 (372)
25 1got_B GT-beta; complex (GTP-b 97.7 0.0071 2.4E-07 60.2 22.5 246 86-414 78-333 (340)
26 1gxr_A ESG1, transducin-like e 97.6 0.0087 3E-07 58.2 22.6 245 86-414 73-327 (337)
27 3ow8_A WD repeat-containing pr 97.6 0.016 5.5E-07 57.3 24.7 244 87-414 60-311 (321)
28 2z2n_A Virginiamycin B lyase; 97.5 0.084 2.9E-06 50.3 28.6 152 41-243 17-174 (299)
29 2pbi_B Guanine nucleotide-bind 97.4 0.033 1.1E-06 55.8 24.3 248 86-414 87-347 (354)
30 2qc5_A Streptogramin B lactona 97.4 0.087 3E-06 50.2 27.8 263 40-412 21-290 (300)
31 3zwl_B Eukaryotic translation 97.4 0.04 1.4E-06 54.0 24.5 289 43-415 37-337 (369)
32 1gxr_A ESG1, transducin-like e 97.4 0.018 6.2E-07 55.9 21.4 224 111-414 57-286 (337)
33 1l0q_A Surface layer protein; 97.4 0.03 1E-06 56.1 23.6 133 86-244 13-152 (391)
34 3vl1_A 26S proteasome regulato 97.4 0.016 5.6E-07 58.6 21.5 266 86-414 79-355 (420)
35 3bws_A Protein LP49; two-domai 97.4 0.026 8.9E-07 57.4 22.9 133 86-243 145-296 (433)
36 4aez_A CDC20, WD repeat-contai 97.4 0.024 8.4E-07 57.5 22.6 252 86-414 114-370 (401)
37 3vl1_A 26S proteasome regulato 97.4 0.057 2E-06 54.5 25.3 88 86-182 120-208 (420)
38 1vyh_C Platelet-activating fac 97.3 0.021 7.2E-07 58.6 21.5 135 86-243 131-269 (410)
39 2ynn_A Coatomer subunit beta'; 97.3 0.012 4.2E-07 57.4 18.8 134 86-241 36-174 (304)
40 3u4y_A Uncharacterized protein 97.3 0.086 2.9E-06 51.3 24.5 129 86-239 21-160 (331)
41 3hfq_A Uncharacterized protein 97.3 0.014 4.7E-07 57.8 18.8 149 86-242 19-175 (347)
42 3q7m_A Lipoprotein YFGL, BAMB; 97.3 0.19 6.5E-06 50.3 29.2 244 86-412 114-367 (376)
43 3ei3_B DNA damage-binding prot 97.2 0.042 1.5E-06 55.0 22.2 134 86-239 97-236 (383)
44 1rwi_B Serine/threonine-protei 97.2 0.15 5E-06 48.0 26.0 155 40-243 25-184 (270)
45 1erj_A Transcriptional repress 97.2 0.077 2.6E-06 53.8 23.5 108 111-243 129-242 (393)
46 3iz6_a 40S ribosomal protein R 97.1 0.22 7.7E-06 50.0 26.5 262 86-415 89-366 (380)
47 4e54_B DNA damage-binding prot 97.1 0.073 2.5E-06 54.7 23.1 91 86-182 143-236 (435)
48 3dsm_A Uncharacterized protein 97.1 0.094 3.2E-06 52.0 23.2 218 129-412 16-244 (328)
49 3fm0_A Protein CIAO1; WDR39,SG 97.1 0.04 1.4E-06 54.9 20.0 157 44-243 22-185 (345)
50 3ow8_A WD repeat-containing pr 97.1 0.19 6.4E-06 49.5 24.5 134 86-243 103-241 (321)
51 3scy_A Hypothetical bacterial 97.0 0.18 6.2E-06 49.9 24.2 93 86-182 30-125 (361)
52 1rwi_B Serine/threonine-protei 97.0 0.24 8.2E-06 46.5 24.3 228 112-437 30-264 (270)
53 2aq5_A Coronin-1A; WD40 repeat 97.0 0.071 2.4E-06 53.9 20.9 234 112-413 88-333 (402)
54 2ymu_A WD-40 repeat protein; u 96.9 0.1 3.5E-06 55.2 22.9 238 86-414 326-570 (577)
55 4ery_A WD repeat-containing pr 96.9 0.17 5.7E-06 49.0 22.8 224 112-415 30-259 (312)
56 2ovr_B FBW7, F-BOX/WD repeat p 96.9 0.22 7.4E-06 51.0 24.6 242 86-415 180-429 (445)
57 1r5m_A SIR4-interacting protei 96.9 0.037 1.3E-06 55.5 18.1 132 87-241 132-280 (425)
58 3jrp_A Fusion protein of prote 96.9 0.04 1.4E-06 54.4 17.8 248 45-389 18-297 (379)
59 1l0q_A Surface layer protein; 96.9 0.14 4.7E-06 51.1 22.0 133 86-244 55-194 (391)
60 3hfq_A Uncharacterized protein 96.8 0.11 3.8E-06 51.1 20.7 132 27-184 27-170 (347)
61 3sfz_A APAF-1, apoptotic pepti 96.8 0.24 8.2E-06 57.9 26.1 274 43-415 620-904 (1249)
62 3dwl_C Actin-related protein 2 96.7 0.025 8.5E-07 56.4 15.2 137 87-240 35-178 (377)
63 3iz6_a 40S ribosomal protein R 96.7 0.13 4.6E-06 51.7 20.8 238 112-415 73-320 (380)
64 1got_B GT-beta; complex (GTP-b 96.7 0.23 7.8E-06 49.0 22.0 225 113-414 63-291 (340)
65 2pm7_B Protein transport prote 96.7 0.28 9.5E-06 47.4 22.2 205 116-389 66-295 (297)
66 2ynn_A Coatomer subunit beta'; 96.7 0.055 1.9E-06 52.7 17.1 224 112-415 20-250 (304)
67 2hes_X YDR267CP; beta-propelle 96.7 0.17 5.9E-06 49.8 20.9 140 87-243 36-188 (330)
68 2pbi_B Guanine nucleotide-bind 96.7 0.19 6.6E-06 50.1 21.4 230 112-414 71-305 (354)
69 3jrp_A Fusion protein of prote 96.7 0.041 1.4E-06 54.3 16.3 243 112-414 18-277 (379)
70 1ri6_A Putative isomerase YBHE 96.7 0.49 1.7E-05 45.6 24.6 115 111-242 43-164 (343)
71 3sfz_A APAF-1, apoptotic pepti 96.7 0.1 3.6E-06 61.0 22.2 246 87-415 985-1240(1249)
72 3mkq_A Coatomer beta'-subunit; 96.6 0.16 5.4E-06 56.2 22.4 151 44-241 19-174 (814)
73 1nr0_A Actin interacting prote 96.6 0.32 1.1E-05 52.5 24.2 136 86-242 213-358 (611)
74 2pm9_A Protein WEB1, protein t 96.6 0.55 1.9E-05 46.8 24.6 92 86-185 90-197 (416)
75 1q7f_A NHL, brain tumor CG1071 96.6 0.43 1.5E-05 45.4 22.6 220 113-411 37-268 (286)
76 2ymu_A WD-40 repeat protein; u 96.6 0.31 1.1E-05 51.4 23.2 243 86-414 285-529 (577)
77 3odt_A Protein DOA1; ubiquitin 96.6 0.54 1.9E-05 44.6 23.6 90 86-182 40-129 (313)
78 1p22_A F-BOX/WD-repeat protein 96.6 0.21 7.2E-06 51.1 21.1 134 86-244 154-290 (435)
79 4gga_A P55CDC, cell division c 96.5 0.13 4.4E-06 52.5 19.3 133 86-241 126-263 (420)
80 2z2n_A Virginiamycin B lyase; 96.5 0.56 1.9E-05 44.4 24.8 131 87-243 80-216 (299)
81 3u4y_A Uncharacterized protein 96.5 0.65 2.2E-05 44.9 26.5 141 86-242 63-210 (331)
82 3i2n_A WD repeat-containing pr 96.5 0.14 4.8E-06 49.9 18.4 145 86-243 45-203 (357)
83 1q7f_A NHL, brain tumor CG1071 96.5 0.63 2.2E-05 44.2 25.2 156 40-241 31-196 (286)
84 1pgu_A Actin interacting prote 96.4 0.13 4.3E-06 54.6 19.0 269 43-415 23-319 (615)
85 3v7d_B Cell division control p 96.4 0.64 2.2E-05 47.5 23.5 246 86-412 143-410 (464)
86 3dwl_C Actin-related protein 2 96.4 0.023 8E-07 56.6 12.0 112 112-241 18-133 (377)
87 3bws_A Protein LP49; two-domai 96.3 0.42 1.4E-05 48.2 21.7 137 86-246 192-341 (433)
88 1r5m_A SIR4-interacting protei 96.3 0.28 9.6E-06 48.8 20.1 63 111-182 114-176 (425)
89 1ri6_A Putative isomerase YBHE 96.3 0.65 2.2E-05 44.7 22.3 95 86-185 61-160 (343)
90 3scy_A Hypothetical bacterial 96.3 0.92 3.2E-05 44.7 23.7 28 216-243 216-246 (361)
91 3vgz_A Uncharacterized protein 96.3 0.81 2.8E-05 44.4 22.8 106 129-246 68-180 (353)
92 3jro_A Fusion protein of prote 96.2 0.052 1.8E-06 60.6 15.2 243 114-415 18-276 (753)
93 2ovr_B FBW7, F-BOX/WD repeat p 96.2 0.96 3.3E-05 46.0 23.7 238 86-414 140-381 (445)
94 4h5i_A Guanine nucleotide-exch 96.2 1.2 4.2E-05 44.4 24.6 232 113-415 79-334 (365)
95 2ojh_A Uncharacterized protein 96.1 0.74 2.5E-05 42.9 20.8 82 86-175 23-105 (297)
96 3dm0_A Maltose-binding peripla 96.1 0.95 3.3E-05 49.4 24.4 87 86-182 406-499 (694)
97 4aez_A CDC20, WD repeat-contai 96.1 1.4 4.8E-05 44.2 23.8 134 86-244 157-298 (401)
98 1nir_A Nitrite reductase; hemo 96.1 0.25 8.6E-06 52.9 19.0 122 28-185 126-257 (543)
99 3fm0_A Protein CIAO1; WDR39,SG 96.0 0.11 3.6E-06 51.7 14.7 191 159-415 21-216 (345)
100 3mmy_A MRNA export factor; mRN 96.0 0.98 3.4E-05 43.8 21.7 91 86-185 65-160 (368)
101 4aow_A Guanine nucleotide-bind 96.0 1.2 4.1E-05 42.8 22.1 88 87-182 63-155 (340)
102 1erj_A Transcriptional repress 95.9 0.75 2.6E-05 46.3 20.9 137 86-240 146-288 (393)
103 3jro_A Fusion protein of prote 95.9 0.17 5.9E-06 56.3 17.4 90 86-182 32-128 (753)
104 3fvz_A Peptidyl-glycine alpha- 95.9 1.5 5.1E-05 43.0 27.9 193 42-246 27-234 (329)
105 3v7d_B Cell division control p 95.8 1.8 6E-05 44.1 23.7 219 86-385 184-426 (464)
106 3q7m_A Lipoprotein YFGL, BAMB; 95.8 1.1 3.9E-05 44.4 21.8 112 111-244 48-169 (376)
107 2pm9_A Protein WEB1, protein t 95.7 0.43 1.5E-05 47.6 18.1 141 86-244 137-299 (416)
108 1vyh_C Platelet-activating fac 95.7 0.83 2.8E-05 46.4 20.5 87 87-182 174-261 (410)
109 1nr0_A Actin interacting prote 95.7 2 6.9E-05 46.1 24.5 255 86-415 82-346 (611)
110 4ggc_A P55CDC, cell division c 95.7 1.1 3.7E-05 42.7 20.2 133 86-241 46-183 (318)
111 3frx_A Guanine nucleotide-bind 95.6 1.2 4.2E-05 43.2 20.7 135 86-243 88-231 (319)
112 2xzm_R RACK1; ribosome, transl 95.6 1.4 4.6E-05 43.3 21.0 63 111-182 82-145 (343)
113 4e54_B DNA damage-binding prot 95.6 1.3 4.3E-05 45.3 21.4 106 116-240 131-241 (435)
114 1k8k_C P40, ARP2/3 complex 41 95.6 0.58 2E-05 45.8 18.2 145 159-357 13-163 (372)
115 3bg1_A Protein SEC13 homolog; 95.6 0.75 2.6E-05 44.7 18.7 90 86-182 36-132 (316)
116 3k26_A Polycomb protein EED; W 95.5 1.5 5.2E-05 42.4 20.9 91 86-182 96-188 (366)
117 4a11_B DNA excision repair pro 95.5 0.35 1.2E-05 47.9 16.4 67 111-182 49-127 (408)
118 1sq9_A Antiviral protein SKI8; 95.5 1.1 3.7E-05 44.4 20.0 120 112-246 69-223 (397)
119 2pm7_B Protein transport prote 95.4 0.74 2.5E-05 44.3 17.8 110 112-240 16-133 (297)
120 3mkq_A Coatomer beta'-subunit; 95.2 2.7 9.1E-05 46.2 23.9 137 86-243 78-221 (814)
121 3ei3_B DNA damage-binding prot 95.2 2.7 9.3E-05 41.4 22.3 112 111-241 79-196 (383)
122 4g56_B MGC81050 protein; prote 94.9 1.1 3.6E-05 44.7 17.7 132 87-241 117-260 (357)
123 2iwa_A Glutamine cyclotransfer 94.8 1 3.6E-05 43.6 16.7 76 158-247 24-103 (266)
124 1sq9_A Antiviral protein SKI8; 94.8 2.1 7E-05 42.3 19.6 139 87-244 93-272 (397)
125 1yfq_A Cell cycle arrest prote 94.8 3.1 0.0001 39.9 22.7 87 87-182 35-127 (342)
126 3lrv_A PRE-mRNA-splicing facto 94.7 3.4 0.00012 40.2 22.2 110 112-241 132-246 (343)
127 1nir_A Nitrite reductase; hemo 94.7 1.7 5.9E-05 46.3 19.7 109 113-247 145-265 (543)
128 4g56_B MGC81050 protein; prote 94.7 1.1 3.6E-05 44.6 17.1 137 86-243 162-305 (357)
129 3bg1_A Protein SEC13 homolog; 94.5 0.55 1.9E-05 45.8 14.1 112 113-243 21-141 (316)
130 3dm0_A Maltose-binding peripla 94.5 3.9 0.00013 44.5 22.3 138 86-243 453-596 (694)
131 3nok_A Glutaminyl cyclase; bet 94.4 3.8 0.00013 39.6 19.4 69 163-247 62-133 (268)
132 3nol_A Glutamine cyclotransfer 94.4 3.6 0.00012 39.6 19.1 75 158-247 46-124 (262)
133 1yfq_A Cell cycle arrest prote 94.3 0.76 2.6E-05 44.4 14.7 105 112-239 18-131 (342)
134 3frx_A Guanine nucleotide-bind 94.2 3.8 0.00013 39.7 19.5 63 111-182 71-134 (319)
135 4gqb_B Methylosome protein 50; 94.1 1.8 6E-05 43.0 17.3 137 86-243 150-293 (344)
136 4d9s_A UVB-resistance protein 94.1 2.2 7.4E-05 43.6 18.1 74 339-418 287-361 (406)
137 4aow_A Guanine nucleotide-bind 93.9 4.6 0.00016 38.6 19.7 134 87-243 110-250 (340)
138 3odt_A Protein DOA1; ubiquitin 93.9 2.6 8.9E-05 39.7 17.4 59 115-182 27-86 (313)
139 3i2n_A WD repeat-containing pr 93.9 1.3 4.3E-05 42.9 15.4 114 112-241 25-150 (357)
140 4gqb_B Methylosome protein 50; 93.9 3.6 0.00012 40.7 18.9 134 86-241 104-248 (344)
141 2ecf_A Dipeptidyl peptidase IV 93.7 9.3 0.00032 41.5 25.5 112 41-182 39-177 (741)
142 3fvz_A Peptidyl-glycine alpha- 93.7 5.5 0.00019 38.8 25.1 240 111-413 29-311 (329)
143 1pgu_A Actin interacting prote 93.7 4 0.00014 42.8 20.0 67 106-182 19-93 (615)
144 1p22_A F-BOX/WD-repeat protein 93.7 4.6 0.00016 40.8 19.9 133 86-243 194-329 (435)
145 2dg1_A DRP35, lactonase; beta 93.7 5.2 0.00018 38.5 21.5 112 111-243 50-175 (333)
146 2xbg_A YCF48-like protein; pho 93.7 5.8 0.0002 38.9 25.4 237 95-413 25-269 (327)
147 3f3f_A Nucleoporin SEH1; struc 93.6 5 0.00017 37.9 23.3 60 116-182 70-139 (351)
148 3mbr_X Glutamine cyclotransfer 93.5 5.4 0.00018 37.9 19.6 75 158-247 24-102 (243)
149 4h5i_A Guanine nucleotide-exch 93.4 5.3 0.00018 39.6 19.3 138 86-243 158-304 (365)
150 1pjx_A Dfpase, DIISOPROPYLFLUO 93.3 5.6 0.00019 37.7 19.6 64 113-184 25-100 (314)
151 2dg1_A DRP35, lactonase; beta 93.2 5.1 0.00017 38.5 18.5 105 42-173 48-153 (333)
152 4gga_A P55CDC, cell division c 93.2 7.7 0.00026 39.0 21.7 87 86-182 170-257 (420)
153 4a11_B DNA excision repair pro 93.1 5.6 0.00019 38.9 18.9 107 112-241 106-220 (408)
154 1pby_B Quinohemoprotein amine 93.1 6.1 0.00021 37.5 22.9 137 86-244 12-168 (337)
155 3hrp_A Uncharacterized protein 92.9 8.9 0.00031 38.9 21.9 112 111-243 136-253 (409)
156 1jmx_B Amine dehydrogenase; ox 92.6 2 6.9E-05 41.3 14.5 142 86-246 22-182 (349)
157 3nol_A Glutamine cyclotransfer 92.5 2.8 9.6E-05 40.4 14.7 119 104-247 41-163 (262)
158 3zwl_B Eukaryotic translation 91.8 2.5 8.4E-05 40.8 14.1 83 86-176 198-281 (369)
159 3lrv_A PRE-mRNA-splicing facto 91.7 5.9 0.0002 38.5 16.8 139 86-243 150-298 (343)
160 3gre_A Serine/threonine-protei 91.7 2.6 9E-05 42.4 14.6 86 90-182 48-138 (437)
161 3e5z_A Putative gluconolactona 91.5 9.5 0.00032 36.0 24.4 112 27-171 17-131 (296)
162 3v9f_A Two-component system se 91.5 19 0.00066 39.6 27.0 250 87-413 385-647 (781)
163 3k26_A Polycomb protein EED; W 91.5 5.3 0.00018 38.4 16.0 98 131-244 45-152 (366)
164 2hqs_A Protein TOLB; TOLB, PAL 91.3 7.9 0.00027 39.2 17.7 136 86-243 204-348 (415)
165 2hqs_A Protein TOLB; TOLB, PAL 91.1 14 0.00048 37.3 20.5 136 86-243 248-391 (415)
166 3e5z_A Putative gluconolactona 91.1 9.2 0.00032 36.1 17.1 137 86-241 91-248 (296)
167 2bkl_A Prolyl endopeptidase; m 91.0 18 0.00061 39.3 21.4 117 43-182 125-255 (695)
168 2xbg_A YCF48-like protein; pho 90.8 13 0.00044 36.3 28.4 73 325-413 235-312 (327)
169 3dw8_B Serine/threonine-protei 90.5 15 0.00051 36.5 22.6 30 342-384 348-377 (447)
170 3mmy_A MRNA export factor; mRN 90.1 2.7 9.2E-05 40.5 12.4 109 112-241 46-162 (368)
171 2qc5_A Streptogramin B lactona 90.0 12 0.00041 34.8 25.0 132 86-243 84-221 (300)
172 3f3f_A Nucleoporin SEH1; struc 89.9 13 0.00044 34.9 19.8 115 113-241 19-145 (351)
173 2vdu_B TRNA (guanine-N(7)-)-me 89.9 18 0.00062 36.5 23.5 141 86-246 126-278 (450)
174 2aq5_A Coronin-1A; WD40 repeat 89.6 3.2 0.00011 41.3 12.9 143 86-243 199-346 (402)
175 2iwa_A Glutamine cyclotransfer 89.5 15 0.00052 35.2 17.7 161 42-247 24-189 (266)
176 3o4h_A Acylamino-acid-releasin 89.3 12 0.0004 39.4 17.7 50 344-414 253-302 (582)
177 2ecf_A Dipeptidyl peptidase IV 88.6 11 0.00037 40.9 17.1 65 341-414 291-357 (741)
178 4a2l_A BT_4663, two-component 88.1 35 0.0012 37.6 29.0 253 87-413 379-650 (795)
179 3mbr_X Glutamine cyclotransfer 87.7 5.3 0.00018 38.0 12.0 118 105-246 20-140 (243)
180 1pby_B Quinohemoprotein amine 86.9 17 0.00059 34.2 15.7 62 118-186 2-66 (337)
181 2vdu_B TRNA (guanine-N(7)-)-me 85.8 21 0.00072 36.0 16.5 92 86-182 221-335 (450)
182 3g4e_A Regucalcin; six bladed 85.3 19 0.00065 34.2 15.0 144 86-246 74-236 (297)
183 1qks_A Cytochrome CD1 nitrite 84.7 40 0.0014 35.9 18.5 91 86-185 178-275 (567)
184 2hes_X YDR267CP; beta-propelle 84.5 6.5 0.00022 38.1 11.3 100 286-415 118-221 (330)
185 2xzm_R RACK1; ribosome, transl 84.1 24 0.0008 34.1 15.3 50 86-138 99-148 (343)
186 3sjl_D Methylamine dehydrogena 83.4 36 0.0012 34.5 16.6 55 86-142 110-171 (386)
187 3nok_A Glutaminyl cyclase; bet 82.6 35 0.0012 32.8 15.1 138 87-246 77-217 (268)
188 2ojh_A Uncharacterized protein 82.5 29 0.00098 31.6 15.0 90 86-182 111-200 (297)
189 3dr2_A Exported gluconolactona 79.7 41 0.0014 31.9 15.0 137 86-241 108-269 (305)
190 2p9w_A MAL S 1 allergenic prot 77.5 31 0.001 34.3 13.2 89 313-413 99-204 (334)
191 4ggc_A P55CDC, cell division c 74.7 54 0.0018 30.3 20.9 88 86-182 90-177 (318)
192 3vu4_A KMHSV2; beta-propeller 74.6 65 0.0022 31.2 20.9 64 111-185 25-90 (355)
193 1qks_A Cytochrome CD1 nitrite 74.3 94 0.0032 33.0 18.3 107 116-247 166-283 (567)
194 3hrp_A Uncharacterized protein 73.9 77 0.0026 31.8 17.8 115 40-186 132-250 (409)
195 2ad6_A Methanol dehydrogenase 72.5 53 0.0018 34.8 14.7 27 218-244 59-90 (571)
196 3g4e_A Regucalcin; six bladed 71.9 67 0.0023 30.2 20.0 59 116-186 24-83 (297)
197 3vu4_A KMHSV2; beta-propeller 71.7 31 0.0011 33.6 11.9 49 87-138 220-270 (355)
198 3dw8_B Serine/threonine-protei 70.2 68 0.0023 31.5 14.3 124 110-243 231-377 (447)
199 3v9f_A Two-component system se 69.4 1.3E+02 0.0046 32.7 19.4 137 87-243 471-615 (781)
200 1jmx_B Amine dehydrogenase; ox 67.8 25 0.00085 33.3 10.0 67 113-186 7-75 (349)
201 2z3z_A Dipeptidyl aminopeptida 64.6 1.5E+02 0.0051 31.5 25.9 87 86-175 142-278 (706)
202 3azo_A Aminopeptidase; POP fam 62.5 85 0.0029 33.1 13.9 90 86-182 266-363 (662)
203 3tc9_A Hypothetical hydrolase; 60.8 55 0.0019 33.2 11.5 130 221-412 149-289 (430)
204 1tl2_A L10, protein (tachylect 60.6 59 0.002 30.5 10.4 100 111-228 93-199 (236)
205 2p4o_A Hypothetical protein; p 60.2 46 0.0016 31.6 10.3 102 39-171 32-133 (306)
206 2oaj_A Protein SNI1; WD40 repe 59.4 2.2E+02 0.0077 31.8 19.1 105 112-242 24-132 (902)
207 3o4h_A Acylamino-acid-releasin 58.0 24 0.00081 37.1 8.3 89 86-182 176-272 (582)
208 2p4o_A Hypothetical protein; p 56.5 1.3E+02 0.0045 28.2 23.0 54 111-173 37-90 (306)
209 2xyi_A Probable histone-bindin 55.0 1.7E+02 0.0057 29.0 19.6 113 111-239 187-309 (430)
210 1npe_A Nidogen, entactin; glyc 54.1 1.3E+02 0.0045 27.4 17.8 139 86-247 102-246 (267)
211 3azo_A Aminopeptidase; POP fam 53.6 82 0.0028 33.3 11.8 93 86-182 218-319 (662)
212 3gre_A Serine/threonine-protei 53.1 34 0.0012 33.9 8.2 90 86-182 193-288 (437)
213 1flg_A Protein (quinoprotein e 52.4 97 0.0033 32.9 12.1 27 218-244 65-94 (582)
214 1pjx_A Dfpase, DIISOPROPYLFLUO 52.3 1.4E+02 0.0049 27.4 15.9 137 87-241 94-258 (314)
215 3ott_A Two-component system se 52.2 2.6E+02 0.0087 30.2 17.5 128 87-239 495-626 (758)
216 1w6s_A Methanol dehydrogenase 51.3 1.3E+02 0.0043 32.2 12.8 27 218-244 59-90 (599)
217 3c5m_A Oligogalacturonate lyas 50.6 1.1E+02 0.0038 29.3 11.4 57 86-146 265-335 (396)
218 4a2l_A BT_4663, two-component 50.1 2E+02 0.0068 31.3 14.6 135 87-243 473-618 (795)
219 2ism_A Putative oxidoreductase 49.9 65 0.0022 31.6 9.6 29 28-57 21-49 (352)
220 1kv9_A Type II quinohemoprotei 49.2 32 0.0011 37.3 7.8 96 285-412 65-170 (668)
221 1yiq_A Quinohemoprotein alcoho 47.0 40 0.0014 36.7 8.1 96 285-412 69-175 (689)
222 3hxj_A Pyrrolo-quinoline quino 46.8 1.8E+02 0.0062 26.9 21.4 122 87-238 42-165 (330)
223 2ad6_A Methanol dehydrogenase 46.3 57 0.0019 34.6 9.0 96 285-412 61-168 (571)
224 1kb0_A Quinohemoprotein alcoho 45.6 3.1E+02 0.011 29.4 27.2 95 86-186 88-200 (677)
225 4hw6_A Hypothetical protein, I 45.4 1.4E+02 0.0046 30.3 11.4 23 222-244 153-176 (433)
226 1kv9_A Type II quinohemoprotei 44.0 3.3E+02 0.011 29.2 30.0 79 86-171 77-168 (668)
227 1k32_A Tricorn protease; prote 43.0 1.4E+02 0.0048 33.9 12.2 84 86-174 401-491 (1045)
228 1k32_A Tricorn protease; prote 41.4 3.8E+02 0.013 30.2 15.5 81 87-175 360-441 (1045)
229 2ghs_A AGR_C_1268P; regucalcin 41.3 2E+02 0.0069 27.3 11.5 75 86-171 72-150 (326)
230 1kb0_A Quinohemoprotein alcoho 40.9 49 0.0017 35.9 7.6 97 285-413 76-183 (677)
231 1yr2_A Prolyl oligopeptidase; 39.6 3.9E+02 0.013 28.7 21.0 108 44-175 168-288 (741)
232 1jof_A Carboxy-CIS,CIS-muconat 39.3 1.6E+02 0.0055 28.3 10.6 54 86-142 168-228 (365)
233 2j04_A TAU60, YPL007P, hypothe 38.7 3.5E+02 0.012 28.8 13.5 113 110-242 134-257 (588)
234 2ece_A 462AA long hypothetical 35.6 3.9E+02 0.013 27.5 17.2 117 115-246 93-244 (462)
235 2fp8_A Strictosidine synthase; 33.4 1.6E+02 0.0053 27.8 9.2 90 87-182 103-212 (322)
236 2p9w_A MAL S 1 allergenic prot 32.1 3.5E+02 0.012 26.5 11.4 86 85-174 100-204 (334)
237 1w6s_A Methanol dehydrogenase 31.9 1.3E+02 0.0045 32.1 9.0 97 285-412 61-174 (599)
238 3das_A Putative oxidoreductase 31.2 3.9E+02 0.013 26.2 12.1 29 28-57 22-50 (347)
239 2z3z_A Dipeptidyl aminopeptida 31.2 4.8E+02 0.017 27.3 26.8 81 86-174 102-200 (706)
240 2xdw_A Prolyl endopeptidase; a 30.3 3.3E+02 0.011 29.0 12.1 110 43-174 129-252 (710)
241 2fp8_A Strictosidine synthase; 28.4 2.2E+02 0.0074 26.8 9.2 67 111-182 234-309 (322)
242 3ott_A Two-component system se 28.4 4.4E+02 0.015 28.3 12.8 111 113-243 479-590 (758)
243 3mvd_K Regulator of chromosome 28.1 85 0.0029 31.5 6.4 75 339-418 304-378 (423)
244 3pe7_A Oligogalacturonate lyas 27.7 1.1E+02 0.0037 29.4 7.0 58 87-145 266-334 (388)
245 2w18_A PALB2, fancn, partner a 27.3 4.6E+02 0.016 25.9 11.6 144 49-238 192-356 (356)
246 3tc9_A Hypothetical hydrolase; 26.9 1.9E+02 0.0065 29.1 8.9 59 108-172 228-288 (430)
247 3pe7_A Oligogalacturonate lyas 25.5 3.2E+02 0.011 25.8 10.1 54 86-143 61-114 (388)
248 1jof_A Carboxy-CIS,CIS-muconat 25.3 2.8E+02 0.0095 26.5 9.5 71 109-182 257-337 (365)
249 2hz6_A Endoplasmic reticulum t 25.2 31 0.0011 34.2 2.4 53 316-385 21-75 (369)
250 3qhy_B Beta-lactamase inhibito 24.4 1.7E+02 0.0057 27.7 7.4 50 115-174 196-245 (282)
251 4hw6_A Hypothetical protein, I 24.1 4.3E+02 0.015 26.4 11.0 60 107-172 229-291 (433)
252 1n7d_A LDL receptor, low-densi 23.9 7E+02 0.024 26.8 13.5 138 86-244 476-619 (699)
253 2qe8_A Uncharacterized protein 23.8 82 0.0028 30.4 5.2 57 343-414 254-311 (343)
254 1xfd_A DIP, dipeptidyl aminope 22.8 4.2E+02 0.015 27.8 11.2 56 85-145 91-148 (723)
255 3c5m_A Oligogalacturonate lyas 22.3 4E+02 0.014 25.0 10.0 61 85-146 320-390 (396)
256 2xyi_A Probable histone-bindin 21.9 2.5E+02 0.0087 27.6 8.6 89 86-182 255-349 (430)
257 2b4w_A Hypothetical protein, c 21.7 3.4E+02 0.011 26.2 8.5 97 47-172 38-149 (315)
258 1w8o_A Bacterial sialidase; 3D 20.6 3.5E+02 0.012 28.3 9.7 89 382-489 310-401 (601)
No 1
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=100.00 E-value=1.3e-67 Score=589.06 Aligned_cols=431 Identities=21% Similarity=0.312 Sum_probs=331.5
Q ss_pred CCCCCcEEEcccCCccceeEEEEec-CCeEEEEecccCCCCCccCCCCccccCccccCCCCcceEEEEeCCCCcEEeCcc
Q 043369 24 QDLEGKWKLLKRSIGVSAMHMALLP-NDRIIAFDRSHFGPSNITLPQGKCIKGVELETSDCYAHAVEFDPITRKVRPLTI 102 (526)
Q Consensus 24 ~~~~g~W~~~~~~~~v~~~~~a~l~-~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~yDp~t~~w~~~~~ 102 (526)
+...++|+.+.+++. .+.|+++++ +||||++||.... .+. +. ......+.+|||.+++|++++.
T Consensus 172 dp~~~~W~~~~~~P~-~~~~~av~~~~g~l~v~GG~~~~--~~~---~~---------~~~~~~~~~yd~~t~~w~~~~~ 236 (656)
T 1k3i_A 172 QPGLGRWGPTIDLPI-VPAAAAIEPTSGRVLMWSSYRND--AFG---GS---------PGGITLTSSWDPSTGIVSDRTV 236 (656)
T ss_dssp CTTSCEEEEEEECSS-CCSEEEEETTTTEEEEEEECCCT--TTC---SC---------CCSEEEEEEECTTTCCBCCCEE
T ss_pred CCCCCeeeeeccCCC-CceeEEEEecCCEEEEEeccccc--ccc---cC---------CCCeEEEEEEeCCCCcEEeCcc
Confidence 445799999877654 667888888 9999999997531 110 00 0012468899999999998875
Q ss_pred C---CccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEecCCcEEEEcCccC---
Q 043369 103 Q---TDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPNGKIIVVGGRFQ--- 176 (526)
Q Consensus 103 ~---~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~dG~v~viGG~~~--- 176 (526)
+ +..||++.+++.||+||++||... ..+++|||+ +++|++. .+|+.+||++++++++||+|||+||...
T Consensus 237 ~~~~~~~~~~~~~~~~~g~lyv~GG~~~--~~v~~yd~~-t~~W~~~--~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~ 311 (656)
T 1k3i_A 237 TVTKHDMFCPGISMDGNGQIVVTGGNDA--KKTSLYDSS-SDSWIPG--PDMQVARGYQSSATMSDGRVFTIGGSWSGGV 311 (656)
T ss_dssp EECSCCCSSCEEEECTTSCEEEECSSST--TCEEEEEGG-GTEEEEC--CCCSSCCSSCEEEECTTSCEEEECCCCCSSS
T ss_pred cCCCCCCccccccCCCCCCEEEeCCCCC--CceEEecCc-CCceeEC--CCCCccccccceEEecCCeEEEEeCcccCCc
Confidence 4 567898888899999999999753 379999999 9999999 6899999999999998999999999532
Q ss_pred --CeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEcc-----------ceEEEeccCCeE
Q 043369 177 --FTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFAND-----------RAILLDYVNNRV 242 (526)
Q Consensus 177 --~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~-----------~~~~yDp~t~~w 242 (526)
.++|+| |.++ +|..++..... . ...... ......+++||++||. ..++||+.+++|
T Consensus 312 ~~~~~e~yd~~t~-----~W~~~~~~~~~-p---~~~~~~-~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w 381 (656)
T 1k3i_A 312 FEKNGEVYSPSSK-----TWTSLPNAKVN-P---MLTADK-QGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGD 381 (656)
T ss_dssp CCCCEEEEETTTT-----EEEEETTSCSG-G---GCCCCT-TGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCE
T ss_pred ccccceEeCCCCC-----cceeCCCcccc-c---cccccc-cceeecCCceEEEECCCCcEEEecCccceeeeecCCcce
Confidence 468999 8887 78765311000 0 000001 1233468899999863 358999999999
Q ss_pred EEeccCCCCCC-CCccCCCCceeecccccccccccccCCCCCccCcEEEEEcCCCCCCCchhhhhhccccccc---ceEE
Q 043369 243 MKNYPVMPGGI-SRNYPSTGSSVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAK---SCGR 318 (526)
Q Consensus 243 ~~~~p~~p~~~-~r~y~~~g~~v~lp~~~~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~---s~~~ 318 (526)
+......+... ....+..+++++++. .+++||++||... +.. ..+++ .+++
T Consensus 382 ~~~~~~~~~~~~~~~~~~~~~av~~~~----------------~~~~i~v~GG~~~--~~~-------~~~~~~~~~v~~ 436 (656)
T 1k3i_A 382 VKSAGKRQSNRGVAPDAMCGNAVMYDA----------------VKGKILTFGGSPD--YQD-------SDATTNAHIITL 436 (656)
T ss_dssp EEEEEECEETTEECCCCBTCEEEEEET----------------TTTEEEEECCBSS--SSS-------SBCCCCEEEEEC
T ss_pred eecCCccccccccCCCCCCCceEeccC----------------CCCeEEEEeCCCC--CCC-------CCcCCcceEEEc
Confidence 74322111100 000123577777652 4899999999742 110 13455 4556
Q ss_pred EEeecCCCCcee-c--ccCccccccceEEeCCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCcEeecCCCCccccc
Q 043369 319 LTITAQNPKWEM-E--EMPLNRVMGDMILLPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINRFRILSPSLIPRLY 395 (526)
Q Consensus 319 ~d~~~~~~~W~~-~--~M~~~R~~~~~vvLpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~Wt~~a~~~~~R~y 395 (526)
||+. .++|+. . +|+.+|.+++++++|||+|||+||.+.+. +|+ +.+++.++|+|||++++|+.+++|+++|.|
T Consensus 437 yd~~--~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~-~~~-~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~ 512 (656)
T 1k3i_A 437 GEPG--TSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGI-PFE-DSTPVFTPEIYVPEQDTFYKQNPNSIVRVY 512 (656)
T ss_dssp CSTT--SCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCC-TTC-CCSBCCCCEEEEGGGTEEEECCCCSSCCCT
T ss_pred CCCC--CCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCc-CcC-CCCcccceEEEcCCCCceeecCCCCCcccc
Confidence 6664 578986 3 89999999999999999999999986432 222 345678899999999999999999999999
Q ss_pred cccceecCCCEEEEecCCCCCCCCcCCCCCCceeeEEEcCcccCC--CCCCCCCeeeecCCCCccceecCCeEEEEEEec
Q 043369 396 HSTAHLLSDGRVLVGGSNPNVNYNFSALFPTELSLQAFYPPYFNL--MSNRSRPSISTVKPGAFLKLKYTENFLLGFKLR 473 (526)
Q Consensus 396 hs~a~LlpdG~V~v~GG~~~~~~~~~~~~p~~~~vE~y~Ppyl~~--~~~~~RP~i~~~~p~~~~~~~~g~~~~v~~~~~ 473 (526)
|+++++++||+|||+||+.++.+ .++++++|+|+||||++ ++.+.||+|++.+| +++.||++|+|+++.
T Consensus 513 hs~a~ll~dg~v~v~GG~~~~~~-----~~~~~~~e~~~Ppyl~~~~~~~~~rP~i~~~~~---~~~~~g~~~~~~~~~- 583 (656)
T 1k3i_A 513 HSISLLLPDGRVFNGGGGLCGDC-----TTNHFDAQIFTPNYLYNSNGNLATRPKITRTST---QSVKVGGRITISTDS- 583 (656)
T ss_dssp TEEEEECTTSCEEEEECCCCTTC-----SCCCCEEEEEECGGGBCTTSSBCCCCCEEEESC---SEEETTCEEEEEESS-
T ss_pred ccHhhcCCCcEEEecCCCCCCCC-----CCCeeEEEEEeChhhccCCCCcCCCCcccccCC---ceecCCCEEEEEEec-
Confidence 99999999999999999988754 24588999999999986 35578999999448 899999999999863
Q ss_pred cCCcceEEEEEeecCcccccCCCCcceeecCce----------------------EEEEEEc-CCcccccEEEEcC
Q 043369 474 SGDLGEIFVTMVAPSFTTHSFAMNQRLLVLELH----------------------GALFLVN-DGVPSKAVWVQMK 526 (526)
Q Consensus 474 ~~~~~~~~v~l~~~~~~THs~n~~QR~v~L~~~----------------------ymlf~~~-~gvPS~~~~v~i~ 526 (526)
.+.+|+|+|++|+||++||+||+|+|+++ |||||++ +||||+|+||+|+
T Consensus 584 ----~~~~~~l~~~~~~th~~~~~qr~~~l~~~~~~~~~~~~~~p~~~~~~ppg~y~lf~~~~~g~ps~~~~v~~~ 655 (656)
T 1k3i_A 584 ----SISKASLIRYGTATHTVNTDQRRIPLTLTNNGGNSYSFQVPSDSGVALPGYWMLFVMNSAGVPSVASTIRVT 655 (656)
T ss_dssp ----CCSEEEEEECCEEETTBCSSCCEEECCEEEEETTEEEEECCSCTTTSCSEEEEEEEECTTSCBCCCEEEEEE
T ss_pred ----cceEEEEEecCccccCcCCCCcEEecceEecCCCEEEEECCCCCCcCCCcCeEEEEECCCCcccccEEEEEe
Confidence 35789999999999999999999999987 9999996 9999999999984
No 2
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=2.1e-34 Score=289.60 Aligned_cols=275 Identities=15% Similarity=0.193 Sum_probs=212.6
Q ss_pred EEEecCCeEEEEecccCCCCCccCCCCccccCccccCCCCcceEEEEeCCCCcEEeCccCCccccccceEcCCCcEEEEc
Q 043369 44 MALLPNDRIIAFDRSHFGPSNITLPQGKCIKGVELETSDCYAHAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTG 123 (526)
Q Consensus 44 ~a~l~~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~v~G 123 (526)
.++..+++||++||.+. . ......+||+.+++|+.++.++..++..+++..+++||++|
T Consensus 10 ~~~~~~~~i~v~GG~~~--~-------------------~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~G 68 (302)
T 2xn4_A 10 TPMNLPKLMVVVGGQAP--K-------------------AIRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVG 68 (302)
T ss_dssp -----CEEEEEECCBSS--S-------------------BCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEES
T ss_pred cccCCCCEEEEECCCCC--C-------------------CCCcEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEe
Confidence 33345789999999742 0 11357899999999999988777777777778899999999
Q ss_pred CCCCC--ccEEEEEcCCCCCCcccccCCCCCcccccceeEEecCCcEEEEcCccC----CeEEEE-cCCCCCCCcceeec
Q 043369 124 GYRLG--ERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPNGKIIVVGGRFQ----FTYEFI-PRTSDSDRKILYQL 196 (526)
Q Consensus 124 G~~~g--~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~dG~v~viGG~~~----~~~E~y-P~~~~~~~~~w~~~ 196 (526)
|.... .+.+++|||. +++|+++ .+|+.+|.+++++++ +|+|||+||.+. ..+|+| |.++ +|..+
T Consensus 69 G~~~~~~~~~~~~~d~~-~~~W~~~--~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~-----~W~~~ 139 (302)
T 2xn4_A 69 GFNGSLRVRTVDSYDPV-KDQWTSV--ANMRDRRSTLGAAVL-NGLLYAVGGFDGSTGLSSVEAYNIKSN-----EWFHV 139 (302)
T ss_dssp CBCSSSBCCCEEEEETT-TTEEEEE--CCCSSCCBSCEEEEE-TTEEEEEEEECSSCEEEEEEEEETTTT-----EEEEE
T ss_pred CcCCCccccceEEECCC-CCceeeC--CCCCccccceEEEEE-CCEEEEEcCCCCCccCceEEEEeCCCC-----eEeec
Confidence 97532 4689999999 9999999 589999999999888 899999999864 258899 8877 78766
Q ss_pred CCccccCCCCCCCCCCcceEEEecCCcEEEEEcc---------ceEEEeccCCeEEEeccCCCCCCCCccCCCCceeecc
Q 043369 197 PFLKETMHSPKIPNNLYPFLHLSTDGNLFIFAND---------RAILLDYVNNRVMKNYPVMPGGISRNYPSTGSSVLLP 267 (526)
Q Consensus 197 p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~---------~~~~yDp~t~~w~~~~p~~p~~~~r~y~~~g~~v~lp 267 (526)
+.+... .+.+..+..+++||++||. +.++||+.+++|. .++.+|. +|.. .+++.
T Consensus 140 ~~~p~~---------r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~--~r~~---~~~~~-- 202 (302)
T 2xn4_A 140 APMNTR---------RSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWT-YIAEMST--RRSG---AGVGV-- 202 (302)
T ss_dssp CCCSSC---------CBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEE-EECCCSS--CCBS---CEEEE--
T ss_pred CCCCCc---------ccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEE-ECCCCcc--cccc---ccEEE--
Confidence 443221 2334566679999999984 3689999999998 5776665 4653 22332
Q ss_pred cccccccccccCCCCCccCcEEEEEcCCCCCCCchhhhhhcccccccceEEEEeecCCCCceec-ccCccccccceEEeC
Q 043369 268 VNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTITAQNPKWEME-EMPLNRVMGDMILLP 346 (526)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvLp 346 (526)
.+++||++||.+.. ..++.+++||+. +++|+.. +|+.+|..+.++++
T Consensus 203 -----------------~~~~iyv~GG~~~~------------~~~~~~~~yd~~--~~~W~~~~~~~~~r~~~~~~~~- 250 (302)
T 2xn4_A 203 -----------------LNNLLYAVGGHDGP------------LVRKSVEVYDPT--TNAWRQVADMNMCRRNAGVCAV- 250 (302)
T ss_dssp -----------------ETTEEEEECCBSSS------------SBCCCEEEEETT--TTEEEEECCCSSCCBSCEEEEE-
T ss_pred -----------------ECCEEEEECCCCCC------------cccceEEEEeCC--CCCEeeCCCCCCccccCeEEEE-
Confidence 48999999997521 236789999986 5899986 99999998887665
Q ss_pred CCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCcEeecC-CCCccccccccceecCCCEE
Q 043369 347 TGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINRFRILS-PSLIPRLYHSTAHLLSDGRV 407 (526)
Q Consensus 347 dG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~Wt~~a-~~~~~R~yhs~a~LlpdG~V 407 (526)
+|+|||+||.+. .....++|+|||++++|+.++ +|+.+|.+|+++++ +++|
T Consensus 251 ~~~i~v~GG~~~--------~~~~~~v~~yd~~~~~W~~~~~~~~~~r~~~~~~~~--~~~i 302 (302)
T 2xn4_A 251 NGLLYVVGGDDG--------SCNLASVEYYNPTTDKWTVVSSCMSTGRSYAGVTVI--DKRL 302 (302)
T ss_dssp TTEEEEECCBCS--------SSBCCCEEEEETTTTEEEECSSCCSSCCBSCEEEEE--EC--
T ss_pred CCEEEEECCcCC--------CcccccEEEEcCCCCeEEECCcccCcccccceEEEe--cccC
Confidence 999999999752 123457899999999999997 89999999998877 5554
No 3
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=1.5e-34 Score=292.00 Aligned_cols=278 Identities=14% Similarity=0.103 Sum_probs=214.6
Q ss_pred CccceeEEEEecCCeEEEEecccCCCCCccCCCCccccCccccCCCCcceEEEEeCCCCcEEeCccCCccccccceEcCC
Q 043369 37 IGVSAMHMALLPNDRIIAFDRSHFGPSNITLPQGKCIKGVELETSDCYAHAVEFDPITRKVRPLTIQTDTWCSSGALLAN 116 (526)
Q Consensus 37 ~~v~~~~~a~l~~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~ 116 (526)
+..+.-|.++..+++||++||.. + . ......+||+.+++|+.++.++..++..++++.+
T Consensus 12 ~~~~~~~~~~~~~~~i~v~GG~~-~-~-------------------~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~ 70 (308)
T 1zgk_A 12 GLVPRGSHAPKVGRLIYTAGGYF-R-Q-------------------SLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVG 70 (308)
T ss_dssp ---------CCCCCCEEEECCBS-S-S-------------------BCCCEEEEETTTTEEEECCCCSSCCBSCEEEEET
T ss_pred CeeeCCccccCCCCEEEEEeCcC-C-C-------------------CcceEEEEcCCCCeEeECCCCCcccccceEEEEC
Confidence 44566788888899999999972 1 0 1235789999999999998877777777777889
Q ss_pred CcEEEEcCC----CC--CccEEEEEcCCCCCCcccccCCCCCcccccceeEEecCCcEEEEcCccC----CeEEEE-cCC
Q 043369 117 GVLVQTGGY----RL--GERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPNGKIIVVGGRFQ----FTYEFI-PRT 185 (526)
Q Consensus 117 G~l~v~GG~----~~--g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~dG~v~viGG~~~----~~~E~y-P~~ 185 (526)
++||++||. .. ..+.+++|||. +++|+++ .+|+.+|.+++++++ +|+|||+||.+. ..+|+| |.+
T Consensus 71 ~~lyv~GG~~~~~~~~~~~~~~~~~d~~-~~~W~~~--~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~ 146 (308)
T 1zgk_A 71 GLLYAVGGRNNSPDGNTDSSALDCYNPM-TNQWSPC--APMSVPRNRIGVGVI-DGHIYAVGGSHGCIHHNSVERYEPER 146 (308)
T ss_dssp TEEEEECCEEEETTEEEECCCEEEEETT-TTEEEEC--CCCSSCCBTCEEEEE-TTEEEEECCEETTEECCCEEEEETTT
T ss_pred CEEEEECCCcCCCCCCeecceEEEECCC-CCeEeEC--CCCCcCccccEEEEE-CCEEEEEcCCCCCcccccEEEECCCC
Confidence 999999997 21 14679999999 9999999 589999999999988 899999999764 368999 887
Q ss_pred CCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEcc-------ceEEEeccCCeEEEeccCCCCCCCCccC
Q 043369 186 SDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFAND-------RAILLDYVNNRVMKNYPVMPGGISRNYP 258 (526)
Q Consensus 186 ~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~-------~~~~yDp~t~~w~~~~p~~p~~~~r~y~ 258 (526)
+ +|..++.+.. ..+.+..+..+++||++||. +.++||+.+++|. .++.+|. +|..
T Consensus 147 ~-----~W~~~~~~p~---------~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~-~~~~~p~--~r~~- 208 (308)
T 1zgk_A 147 D-----EWHLVAPMLT---------RRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWR-MITAMNT--IRSG- 208 (308)
T ss_dssp T-----EEEECCCCSS---------CCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEE-ECCCCSS--CCBS-
T ss_pred C-----eEeECCCCCc---------cccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEe-eCCCCCC--cccc-
Confidence 7 8887643322 12334556669999999984 4799999999998 5776665 4653
Q ss_pred CCCceeecccccccccccccCCCCCccCcEEEEEcCCCCCCCchhhhhhcccccccceEEEEeecCCCCceec-ccCccc
Q 043369 259 STGSSVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTITAQNPKWEME-EMPLNR 337 (526)
Q Consensus 259 ~~g~~v~lp~~~~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R 337 (526)
.+++. .+++||++||.... ..++.+++||+. +++|+.. +|+.+|
T Consensus 209 --~~~~~-------------------~~~~iyv~GG~~~~------------~~~~~v~~yd~~--~~~W~~~~~~p~~r 253 (308)
T 1zgk_A 209 --AGVCV-------------------LHNCIYAAGGYDGQ------------DQLNSVERYDVE--TETWTFVAPMKHRR 253 (308)
T ss_dssp --CEEEE-------------------ETTEEEEECCBCSS------------SBCCCEEEEETT--TTEEEECCCCSSCC
T ss_pred --ceEEE-------------------ECCEEEEEeCCCCC------------CccceEEEEeCC--CCcEEECCCCCCCc
Confidence 22332 48999999998621 236789999986 5899986 999999
Q ss_pred cccceEEeCCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCcEeecCCCCcccccccccee
Q 043369 338 VMGDMILLPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINRFRILSPSLIPRLYHSTAHL 401 (526)
Q Consensus 338 ~~~~~vvLpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~Wt~~a~~~~~R~yhs~a~L 401 (526)
..++++++ +++|||+||.+. .....++++|||++++|+.+++|+.+|.+|++++|
T Consensus 254 ~~~~~~~~-~~~i~v~GG~~~--------~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~l 308 (308)
T 1zgk_A 254 SALGITVH-QGRIYVLGGYDG--------HTFLDSVECYDPDTDTWSEVTRMTSGRSGVGVAVT 308 (308)
T ss_dssp BSCEEEEE-TTEEEEECCBCS--------SCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEC
T ss_pred cceEEEEE-CCEEEEEcCcCC--------CcccceEEEEcCCCCEEeecCCCCCCcccceeEeC
Confidence 99887776 999999999752 12345789999999999999999999999997764
No 4
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=2e-33 Score=282.86 Aligned_cols=267 Identities=15% Similarity=0.163 Sum_probs=213.4
Q ss_pred CCeEEEEecccCCCCCccCCCCccccCccccCCCCcceEEEEeCCCCcEEeCccCCccccccceEcCCCcEEEEcCCCC-
Q 043369 49 NDRIIAFDRSHFGPSNITLPQGKCIKGVELETSDCYAHAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYRL- 127 (526)
Q Consensus 49 ~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~v~GG~~~- 127 (526)
.+.||++||... .....+|||.+++|+.++.++..++..++++.+++||++||...
T Consensus 11 ~~~l~~~GG~~~-----------------------~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~ 67 (306)
T 3ii7_A 11 HDYRIALFGGSQ-----------------------PQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLF 67 (306)
T ss_dssp CCEEEEEECCSS-----------------------TTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSS
T ss_pred cceEEEEeCCCC-----------------------CceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCC
Confidence 478999999741 12477899999999999988888888888888999999999752
Q ss_pred CccEEEEEcCCCCCCcccccCCCCCcccccceeEEecCCcEEEEcCcc-C----CeEEEE-cCCCCCCCcceeecCCccc
Q 043369 128 GERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPNGKIIVVGGRF-Q----FTYEFI-PRTSDSDRKILYQLPFLKE 201 (526)
Q Consensus 128 g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~dG~v~viGG~~-~----~~~E~y-P~~~~~~~~~w~~~p~l~~ 201 (526)
..+.+++|||. +++|..+ .+|+.+|..++++++ +++|||+||.+ . ..+++| |.++ +|..++.+..
T Consensus 68 ~~~~~~~~d~~-~~~W~~~--~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~~~-----~W~~~~~~p~ 138 (306)
T 3ii7_A 68 PIKRMDCYNVV-KDSWYSK--LGPPTPRDSLAACAA-EGKIYTSGGSEVGNSALYLFECYDTRTE-----SWHTKPSMLT 138 (306)
T ss_dssp BCCEEEEEETT-TTEEEEE--ECCSSCCBSCEEEEE-TTEEEEECCBBTTBSCCCCEEEEETTTT-----EEEEECCCSS
T ss_pred CcceEEEEeCC-CCeEEEC--CCCCccccceeEEEE-CCEEEEECCCCCCCcEeeeEEEEeCCCC-----ceEeCCCCcC
Confidence 25789999999 9999998 579999999999888 89999999986 2 368999 8877 7876644332
Q ss_pred cCCCCCCCCCCcceEEEecCCcEEEEEcc-----------ceEEEeccCCeEEEeccCCCCCCCCccCCCCceeeccccc
Q 043369 202 TMHSPKIPNNLYPFLHLSTDGNLFIFAND-----------RAILLDYVNNRVMKNYPVMPGGISRNYPSTGSSVLLPVNL 270 (526)
Q Consensus 202 ~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~-----------~~~~yDp~t~~w~~~~p~~p~~~~r~y~~~g~~v~lp~~~ 270 (526)
. .+.+..+..+++||++||. +.++||+.+++|. .++++|. +|.. .+++.
T Consensus 139 ~---------r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~--~r~~---~~~~~----- 198 (306)
T 3ii7_A 139 Q---------RCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWT-ELCPMIE--ARKN---HGLVF----- 198 (306)
T ss_dssp C---------CBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEE-EECCCSS--CCBS---CEEEE-----
T ss_pred C---------cceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEE-ECCCccc--hhhc---ceEEE-----
Confidence 1 2334556679999999983 3689999999998 5776665 4653 23332
Q ss_pred ccccccccCCCCCccCcEEEEEcCCCCCCCchhhhhhcccccccceEEEEeecCCCCceec-ccCccccccceEEeCCCc
Q 043369 271 SSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTITAQNPKWEME-EMPLNRVMGDMILLPTGD 349 (526)
Q Consensus 271 ~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvLpdG~ 349 (526)
.+++||++||.... ..++.+++||+. +++|+.. +||.+|..+.++++ +++
T Consensus 199 --------------~~~~i~v~GG~~~~------------~~~~~~~~yd~~--~~~W~~~~~~p~~r~~~~~~~~-~~~ 249 (306)
T 3ii7_A 199 --------------VKDKIFAVGGQNGL------------GGLDNVEYYDIK--LNEWKMVSPMPWKGVTVKCAAV-GSI 249 (306)
T ss_dssp --------------ETTEEEEECCEETT------------EEBCCEEEEETT--TTEEEECCCCSCCBSCCEEEEE-TTE
T ss_pred --------------ECCEEEEEeCCCCC------------CCCceEEEeeCC--CCcEEECCCCCCCccceeEEEE-CCE
Confidence 48999999997521 236789999986 5899986 99999999987776 999
Q ss_pred EEEEcCcCCCCCCccCCCCCccccEEEeCCCCcEeecCCCCccccccccceecCC
Q 043369 350 VLIINGAAKGTAGWGAAREPVLNPVIYCPKINRFRILSPSLIPRLYHSTAHLLSD 404 (526)
Q Consensus 350 V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~Wt~~a~~~~~R~yhs~a~Llpd 404 (526)
|||+||.+. . .....+++|||++++|+.+++|+.+|.+|+++++..+
T Consensus 250 i~v~GG~~~-~-------~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~ 296 (306)
T 3ii7_A 250 VYVLAGFQG-V-------GRLGHILEYNTETDKWVANSKVRAFPVTSCLICVVDT 296 (306)
T ss_dssp EEEEECBCS-S-------SBCCEEEEEETTTTEEEEEEEEECCSCTTCEEEEEEC
T ss_pred EEEEeCcCC-C-------eeeeeEEEEcCCCCeEEeCCCcccccceeEEEEECCc
Confidence 999999762 1 1344789999999999999999999999998877543
No 5
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=5.8e-33 Score=278.66 Aligned_cols=269 Identities=16% Similarity=0.142 Sum_probs=211.8
Q ss_pred cCCeEEEEecccCCCCCccCCCCccccCccccCCCCcceEEEEeCCCCcEEeCccCCccccccceEcCCCcEEEEcCCCC
Q 043369 48 PNDRIIAFDRSHFGPSNITLPQGKCIKGVELETSDCYAHAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYRL 127 (526)
Q Consensus 48 ~~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~v~GG~~~ 127 (526)
.+++||++||...+ +. ......+||+.+++|+.++.++..++..+++..+++||++||...
T Consensus 13 ~~~~i~~~GG~~~~--------~~-----------~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~ 73 (301)
T 2vpj_A 13 ANEVLLVVGGFGSQ--------QS-----------PIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDG 73 (301)
T ss_dssp CCEEEEEECCEETT--------TE-----------ECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCS
T ss_pred CCCEEEEEeCccCC--------Cc-----------ceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCC
Confidence 57899999994321 11 123578999999999999987777777778888999999999753
Q ss_pred C--ccEEEEEcCCCCCC---cccccCCCCCcccccceeEEecCCcEEEEcCccC----CeEEEE-cCCCCCCCcceeecC
Q 043369 128 G--ERVVRYLKPCSDCD---WEEDHQNGLISPRWYASNQILPNGKIIVVGGRFQ----FTYEFI-PRTSDSDRKILYQLP 197 (526)
Q Consensus 128 g--~~~v~~ydp~~t~~---W~~~~~~~m~~~R~y~s~~~L~dG~v~viGG~~~----~~~E~y-P~~~~~~~~~w~~~p 197 (526)
. .+.+++||+. +++ |+.+ .+|+.+|.+++++++ +++||++||... ..+|+| |.++ +|..++
T Consensus 74 ~~~~~~~~~~d~~-~~~~~~W~~~--~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~~~-----~W~~~~ 144 (301)
T 2vpj_A 74 RSRLSSVECLDYT-ADEDGVWYSV--APMNVRRGLAGATTL-GDMIYVSGGFDGSRRHTSMERYDPNID-----QWSMLG 144 (301)
T ss_dssp SCBCCCEEEEETT-CCTTCCCEEE--CCCSSCCBSCEEEEE-TTEEEEECCBCSSCBCCEEEEEETTTT-----EEEEEE
T ss_pred CccCceEEEEECC-CCCCCeeEEC--CCCCCCccceeEEEE-CCEEEEEcccCCCcccceEEEEcCCCC-----eEEECC
Confidence 2 4689999999 999 9999 689999999999888 899999999764 368999 8877 787654
Q ss_pred CccccCCCCCCCCCCcceEEEecCCcEEEEEcc-------ceEEEeccCCeEEEeccCCCCCCCCccCCCCceeeccccc
Q 043369 198 FLKETMHSPKIPNNLYPFLHLSTDGNLFIFAND-------RAILLDYVNNRVMKNYPVMPGGISRNYPSTGSSVLLPVNL 270 (526)
Q Consensus 198 ~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~-------~~~~yDp~t~~w~~~~p~~p~~~~r~y~~~g~~v~lp~~~ 270 (526)
.+... .+.+..+..+++||++||. +.++||+.+++|. .++++|. +|.. .+++.
T Consensus 145 ~~p~~---------r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~-~~~~~p~--~r~~---~~~~~----- 204 (301)
T 2vpj_A 145 DMQTA---------REGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWT-NVTPMAT--KRSG---AGVAL----- 204 (301)
T ss_dssp ECSSC---------CBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEE-EECCCSS--CCBS---CEEEE-----
T ss_pred CCCCC---------cccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEE-eCCCCCc--cccc---ceEEE-----
Confidence 33221 2334556679999999984 4799999999998 5776665 4643 22332
Q ss_pred ccccccccCCCCCccCcEEEEEcCCCCCCCchhhhhhcccccccceEEEEeecCCCCceec-ccCccccccceEEeCCCc
Q 043369 271 SSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTITAQNPKWEME-EMPLNRVMGDMILLPTGD 349 (526)
Q Consensus 271 ~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvLpdG~ 349 (526)
.+++||++||.... ..++.+++||+. +++|+.. +|+.+|..+.++++ +|+
T Consensus 205 --------------~~~~i~v~GG~~~~------------~~~~~v~~yd~~--~~~W~~~~~~p~~r~~~~~~~~-~~~ 255 (301)
T 2vpj_A 205 --------------LNDHIYVVGGFDGT------------AHLSSVEAYNIR--TDSWTTVTSMTTPRCYVGATVL-RGR 255 (301)
T ss_dssp --------------ETTEEEEECCBCSS------------SBCCCEEEEETT--TTEEEEECCCSSCCBSCEEEEE-TTE
T ss_pred --------------ECCEEEEEeCCCCC------------cccceEEEEeCC--CCcEEECCCCCCcccceeEEEE-CCE
Confidence 48999999997621 236789999986 5899986 99999999887776 999
Q ss_pred EEEEcCcCCCCCCccCCCCCccccEEEeCCCCcEeecCCCCcccccccccee
Q 043369 350 VLIINGAAKGTAGWGAAREPVLNPVIYCPKINRFRILSPSLIPRLYHSTAHL 401 (526)
Q Consensus 350 V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~Wt~~a~~~~~R~yhs~a~L 401 (526)
||++||.+. ......+++|||++++|+.+++|+.+|.+|+++++
T Consensus 256 i~v~GG~~~--------~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~ 299 (301)
T 2vpj_A 256 LYAIAGYDG--------NSLLSSIECYDPIIDSWEVVTSMGTQRCDAGVCVL 299 (301)
T ss_dssp EEEECCBCS--------SSBEEEEEEEETTTTEEEEEEEEEEEEESCEEEEE
T ss_pred EEEEcCcCC--------CcccccEEEEcCCCCeEEEcCCCCcccccceEEEe
Confidence 999999752 12345789999999999999999999999997665
No 6
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=1.3e-31 Score=270.53 Aligned_cols=257 Identities=16% Similarity=0.134 Sum_probs=198.0
Q ss_pred cccccceEcCCCcEEEEcCCC-CCccEEEEEcCCCCCCcccccCCCCCcccccceeEEecCCcEEEEcCc----cC----
Q 043369 106 TWCSSGALLANGVLVQTGGYR-LGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPNGKIIVVGGR----FQ---- 176 (526)
Q Consensus 106 ~fc~~~~~l~~G~l~v~GG~~-~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~dG~v~viGG~----~~---- 176 (526)
.++...++..+++||++||.. ...+.+++|||. +++|..+ .+|+.+|.+++++++ +++||++||. +.
T Consensus 14 ~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~d~~-~~~W~~~--~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~ 89 (308)
T 1zgk_A 14 VPRGSHAPKVGRLIYTAGGYFRQSLSYLEAYNPS-NGTWLRL--ADLQVPRSGLAGCVV-GGLLYAVGGRNNSPDGNTDS 89 (308)
T ss_dssp -------CCCCCCEEEECCBSSSBCCCEEEEETT-TTEEEEC--CCCSSCCBSCEEEEE-TTEEEEECCEEEETTEEEEC
T ss_pred eeCCccccCCCCEEEEEeCcCCCCcceEEEEcCC-CCeEeEC--CCCCcccccceEEEE-CCEEEEECCCcCCCCCCeec
Confidence 345556677899999999973 225789999999 9999999 689999999998888 8999999998 32
Q ss_pred CeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEcc-------ceEEEeccCCeEEEeccC
Q 043369 177 FTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFAND-------RAILLDYVNNRVMKNYPV 248 (526)
Q Consensus 177 ~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~-------~~~~yDp~t~~w~~~~p~ 248 (526)
..+++| |.++ +|..++.+... .+.+..++.+|+||++||. +.++||+.+++|. .+++
T Consensus 90 ~~~~~~d~~~~-----~W~~~~~~p~~---------r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~-~~~~ 154 (308)
T 1zgk_A 90 SALDCYNPMTN-----QWSPCAPMSVP---------RNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWH-LVAP 154 (308)
T ss_dssp CCEEEEETTTT-----EEEECCCCSSC---------CBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEE-ECCC
T ss_pred ceEEEECCCCC-----eEeECCCCCcC---------ccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEe-ECCC
Confidence 358889 8877 88876544321 1234556679999999993 5799999999998 5777
Q ss_pred CCCCCCCccCCCCceeecccccccccccccCCCCCccCcEEEEEcCCCCCCCchhhhhhcccccccceEEEEeecCCCCc
Q 043369 249 MPGGISRNYPSTGSSVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTITAQNPKW 328 (526)
Q Consensus 249 ~p~~~~r~y~~~g~~v~lp~~~~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W 328 (526)
+|. +|.. .+++. .+++||++||.... ..++.+++||+. +++|
T Consensus 155 ~p~--~r~~---~~~~~-------------------~~~~iyv~GG~~~~------------~~~~~~~~yd~~--~~~W 196 (308)
T 1zgk_A 155 MLT--RRIG---VGVAV-------------------LNRLLYAVGGFDGT------------NRLNSAECYYPE--RNEW 196 (308)
T ss_dssp CSS--CCBS---CEEEE-------------------ETTEEEEECCBCSS------------CBCCCEEEEETT--TTEE
T ss_pred CCc--cccc---eEEEE-------------------ECCEEEEEeCCCCC------------CcCceEEEEeCC--CCeE
Confidence 765 4653 22332 48999999997621 236789999986 5899
Q ss_pred eec-ccCccccccceEEeCCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCcEeecCCCCccccccccceecCCCEE
Q 043369 329 EME-EMPLNRVMGDMILLPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINRFRILSPSLIPRLYHSTAHLLSDGRV 407 (526)
Q Consensus 329 ~~~-~M~~~R~~~~~vvLpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~Wt~~a~~~~~R~yhs~a~LlpdG~V 407 (526)
+.. +|+.+|..++++++ +++|||+||... ......+++|||++++|+.+++|+.+|..|+++++ +++|
T Consensus 197 ~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~--------~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i 265 (308)
T 1zgk_A 197 RMITAMNTIRSGAGVCVL-HNCIYAAGGYDG--------QDQLNSVERYDVETETWTFVAPMKHRRSALGITVH--QGRI 265 (308)
T ss_dssp EECCCCSSCCBSCEEEEE-TTEEEEECCBCS--------SSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEE
T ss_pred eeCCCCCCccccceEEEE-CCEEEEEeCCCC--------CCccceEEEEeCCCCcEEECCCCCCCccceEEEEE--CCEE
Confidence 986 99999999987776 999999999762 12345789999999999999999999999998776 9999
Q ss_pred EEecCCCCCCCCcCCCCCCceeeEEEcCccc
Q 043369 408 LVGGSNPNVNYNFSALFPTELSLQAFYPPYF 438 (526)
Q Consensus 408 ~v~GG~~~~~~~~~~~~p~~~~vE~y~Ppyl 438 (526)
|++||..... + ..++|+|+|..-
T Consensus 266 ~v~GG~~~~~------~--~~~v~~yd~~~~ 288 (308)
T 1zgk_A 266 YVLGGYDGHT------F--LDSVECYDPDTD 288 (308)
T ss_dssp EEECCBCSSC------B--CCEEEEEETTTT
T ss_pred EEEcCcCCCc------c--cceEEEEcCCCC
Confidence 9999964321 1 347999999763
No 7
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=2.5e-31 Score=267.10 Aligned_cols=251 Identities=17% Similarity=0.168 Sum_probs=195.8
Q ss_pred cCCCcEEEEcCCCC-CccEEEEEcCCCCCCcccccCCCCCcccccceeEEecCCcEEEEcCccC----CeEEEE-cCCCC
Q 043369 114 LANGVLVQTGGYRL-GERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPNGKIIVVGGRFQ----FTYEFI-PRTSD 187 (526)
Q Consensus 114 l~~G~l~v~GG~~~-g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~dG~v~viGG~~~----~~~E~y-P~~~~ 187 (526)
..+++||++||... ..+.+++||+. +++|..+ .+|+.+|.+++++++ +++|||+||.+. ..+++| |.++
T Consensus 13 ~~~~~i~v~GG~~~~~~~~~~~~d~~-~~~W~~~--~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~~~- 87 (302)
T 2xn4_A 13 NLPKLMVVVGGQAPKAIRSVECYDFK-EERWHQV--AELPSRRCRAGMVYM-AGLVFAVGGFNGSLRVRTVDSYDPVKD- 87 (302)
T ss_dssp --CEEEEEECCBSSSBCCCEEEEETT-TTEEEEE--CCCSSCCBSCEEEEE-TTEEEEESCBCSSSBCCCEEEEETTTT-
T ss_pred CCCCEEEEECCCCCCCCCcEEEEcCc-CCcEeEc--ccCCcccccceEEEE-CCEEEEEeCcCCCccccceEEECCCCC-
Confidence 35789999999753 34789999999 9999999 689999999998888 899999999764 368899 8877
Q ss_pred CCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEcc-------ceEEEeccCCeEEEeccCCCCCCCCccCCC
Q 043369 188 SDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFAND-------RAILLDYVNNRVMKNYPVMPGGISRNYPST 260 (526)
Q Consensus 188 ~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~-------~~~~yDp~t~~w~~~~p~~p~~~~r~y~~~ 260 (526)
+|..++.+... .+.+..++.+|+||++||. ++++||+.+++|. .++++|. +|.. +
T Consensus 88 ----~W~~~~~~p~~---------r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~-~~~~~p~--~r~~--~ 149 (302)
T 2xn4_A 88 ----QWTSVANMRDR---------RSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWF-HVAPMNT--RRSS--V 149 (302)
T ss_dssp ----EEEEECCCSSC---------CBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEE-EECCCSS--CCBS--C
T ss_pred ----ceeeCCCCCcc---------ccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEe-ecCCCCC--cccC--c
Confidence 88876544321 2235566779999999993 4799999999998 5777765 4653 2
Q ss_pred CceeecccccccccccccCCCCCccCcEEEEEcCCCCCCCchhhhhhcccccccceEEEEeecCCCCceec-ccCccccc
Q 043369 261 GSSVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTITAQNPKWEME-EMPLNRVM 339 (526)
Q Consensus 261 g~~v~lp~~~~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~ 339 (526)
+ ++. .+++||++||..... ...++.+++||+. +++|+.. +|+.+|..
T Consensus 150 ~-~~~-------------------~~~~iyv~GG~~~~~----------~~~~~~~~~yd~~--~~~W~~~~~~p~~r~~ 197 (302)
T 2xn4_A 150 G-VGV-------------------VGGLLYAVGGYDVAS----------RQCLSTVECYNAT--TNEWTYIAEMSTRRSG 197 (302)
T ss_dssp E-EEE-------------------ETTEEEEECCEETTT----------TEECCCEEEEETT--TTEEEEECCCSSCCBS
T ss_pred e-EEE-------------------ECCEEEEEeCCCCCC----------CccccEEEEEeCC--CCcEEECCCCcccccc
Confidence 2 332 489999999975211 1236789999986 5899986 99999999
Q ss_pred cceEEeCCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCcEeecCCCCccccccccceecCCCEEEEecCCCCCCCC
Q 043369 340 GDMILLPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINRFRILSPSLIPRLYHSTAHLLSDGRVLVGGSNPNVNYN 419 (526)
Q Consensus 340 ~~~vvLpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~Wt~~a~~~~~R~yhs~a~LlpdG~V~v~GG~~~~~~~ 419 (526)
++++++ +++||++||.+. . .....+++|||++++|+.+++|+.+|..|+++++ +|+||++||.....
T Consensus 198 ~~~~~~-~~~iyv~GG~~~-~-------~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~i~v~GG~~~~~-- 264 (302)
T 2xn4_A 198 AGVGVL-NNLLYAVGGHDG-P-------LVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAV--NGLLYVVGGDDGSC-- 264 (302)
T ss_dssp CEEEEE-TTEEEEECCBSS-S-------SBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSS--
T ss_pred ccEEEE-CCEEEEECCCCC-C-------cccceEEEEeCCCCCEeeCCCCCCccccCeEEEE--CCEEEEECCcCCCc--
Confidence 887766 999999999762 1 1234789999999999999999999999987766 99999999964331
Q ss_pred cCCCCCCceeeEEEcCccc
Q 043369 420 FSALFPTELSLQAFYPPYF 438 (526)
Q Consensus 420 ~~~~~p~~~~vE~y~Ppyl 438 (526)
...++|+|+|..-
T Consensus 265 ------~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 265 ------NLASVEYYNPTTD 277 (302)
T ss_dssp ------BCCCEEEEETTTT
T ss_pred ------ccccEEEEcCCCC
Confidence 1347999999763
No 8
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=8.8e-32 Score=272.79 Aligned_cols=264 Identities=18% Similarity=0.205 Sum_probs=199.0
Q ss_pred EEEEeCCCCcEEeCccC-CccccccceEcCCCcEEEEcCCC---CC-----ccEEEEEcCCCCCCcccccCCCCCccccc
Q 043369 87 AVEFDPITRKVRPLTIQ-TDTWCSSGALLANGVLVQTGGYR---LG-----ERVVRYLKPCSDCDWEEDHQNGLISPRWY 157 (526)
Q Consensus 87 ~~~yDp~t~~w~~~~~~-~~~fc~~~~~l~~G~l~v~GG~~---~g-----~~~v~~ydp~~t~~W~~~~~~~m~~~R~y 157 (526)
..+|||.+++|...+.. ...++..++++.+++||++||.. ++ .+.+++|||. +++|.++ .+|+.+|.+
T Consensus 26 ~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~-~~~W~~~--~~~p~~r~~ 102 (318)
T 2woz_A 26 AVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNV-SSEWVGL--PPLPSARCL 102 (318)
T ss_dssp EEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETT-TTEEEEC--SCBSSCBCS
T ss_pred eEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCC-CCcEEEC--CCCCccccc
Confidence 56899999999985432 24556667788899999999952 11 1348999999 9999998 589999999
Q ss_pred ceeEEecCCcEEEEcCccC------CeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEcc
Q 043369 158 ASNQILPNGKIIVVGGRFQ------FTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFAND 230 (526)
Q Consensus 158 ~s~~~L~dG~v~viGG~~~------~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~ 230 (526)
++++++ +++|||+||... ..+++| |.++ +|..++.+.. ..+.+..+..+|+||++||.
T Consensus 103 ~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~-----~W~~~~~~p~---------~r~~~~~~~~~~~iyv~GG~ 167 (318)
T 2woz_A 103 FGLGEV-DDKIYVVAGKDLQTEASLDSVLCYDPVAA-----KWSEVKNLPI---------KVYGHNVISHNGMIYCLGGK 167 (318)
T ss_dssp CEEEEE-TTEEEEEEEEBTTTCCEEEEEEEEETTTT-----EEEEECCCSS---------CEESCEEEEETTEEEEECCE
T ss_pred cceEEE-CCEEEEEcCccCCCCcccceEEEEeCCCC-----CEeECCCCCC---------cccccEEEEECCEEEEEcCC
Confidence 999888 899999999752 258899 8877 7876643322 12335566689999999984
Q ss_pred --------ceEEEeccCCeEEEeccCCCCCCCCccCCCCceeecccccccccccccCCCCCccCcEEEEEcCCCCCCCch
Q 043369 231 --------RAILLDYVNNRVMKNYPVMPGGISRNYPSTGSSVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNEN 302 (526)
Q Consensus 231 --------~~~~yDp~t~~w~~~~p~~p~~~~r~y~~~g~~v~lp~~~~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~ 302 (526)
+.++||+.+++|. .++++|. +|.. ++ ++. .+++||++||....
T Consensus 168 ~~~~~~~~~~~~yd~~~~~W~-~~~~~p~--~r~~--~~-~~~-------------------~~~~iyv~GG~~~~---- 218 (318)
T 2woz_A 168 TDDKKCTNRVFIYNPKKGDWK-DLAPMKT--PRSM--FG-VAI-------------------HKGKIVIAGGVTED---- 218 (318)
T ss_dssp ESSSCBCCCEEEEETTTTEEE-EECCCSS--CCBS--CE-EEE-------------------ETTEEEEEEEEETT----
T ss_pred CCCCCccceEEEEcCCCCEEE-ECCCCCC--Cccc--ce-EEE-------------------ECCEEEEEcCcCCC----
Confidence 3799999999998 5776665 4653 23 332 48999999997521
Q ss_pred hhhhhcccccccceEEEEeecCCCCceec-ccCccccccceEEeCCCcEEEEcCcCCCCCCcc-CCCCCccccEEEeCCC
Q 043369 303 AAEAQIFLPAAKSCGRLTITAQNPKWEME-EMPLNRVMGDMILLPTGDVLIINGAAKGTAGWG-AAREPVLNPVIYCPKI 380 (526)
Q Consensus 303 ~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvLpdG~V~vvGG~~~g~~g~~-~~~~~~~~~e~YDP~t 380 (526)
..++.+++||+. +++|+.. +||.+|..+.++++ +++||++||.......-+ ........+++|||++
T Consensus 219 --------~~~~~~~~yd~~--~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~ 287 (318)
T 2woz_A 219 --------GLSASVEAFDLK--TNKWEVMTEFPQERSSISLVSL-AGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDK 287 (318)
T ss_dssp --------EEEEEEEEEETT--TCCEEECCCCSSCCBSCEEEEE-TTEEEEECCBCCBC----CCBCCBCCCEEEEETTT
T ss_pred --------CccceEEEEECC--CCeEEECCCCCCcccceEEEEE-CCEEEEECCeeccCCCCceeccceeeeEEEEeCCC
Confidence 235688999986 5899986 99999999887765 999999999762110000 0012345789999999
Q ss_pred CcEeecCCCCccccccccceecCCCEEEEecC
Q 043369 381 NRFRILSPSLIPRLYHSTAHLLSDGRVLVGGS 412 (526)
Q Consensus 381 ~~Wt~~a~~~~~R~yhs~a~LlpdG~V~v~GG 412 (526)
++|+.+ ++.+|..|+++++ +++||+...
T Consensus 288 ~~W~~~--~~~~r~~~~~~~~--~~~iyi~~~ 315 (318)
T 2woz_A 288 KEWAGM--LKEIRYASGASCL--ATRLNLFKL 315 (318)
T ss_dssp TEEEEE--ESCCGGGTTCEEE--EEEEEGGGC
T ss_pred CEehhh--cccccccccceee--CCEEEEEEe
Confidence 999999 8889999998877 999998643
No 9
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=6.2e-32 Score=273.56 Aligned_cols=263 Identities=16% Similarity=0.133 Sum_probs=200.6
Q ss_pred EEEEeCCCCcEEeCccC-CccccccceEcCCCcEEEEcCCC----C--C--ccEEEEEcCCCCCCcccccCCCCCccccc
Q 043369 87 AVEFDPITRKVRPLTIQ-TDTWCSSGALLANGVLVQTGGYR----L--G--ERVVRYLKPCSDCDWEEDHQNGLISPRWY 157 (526)
Q Consensus 87 ~~~yDp~t~~w~~~~~~-~~~fc~~~~~l~~G~l~v~GG~~----~--g--~~~v~~ydp~~t~~W~~~~~~~m~~~R~y 157 (526)
..+|||.+++|+..+.. +..++..+++..+++||++||.. . . .+.+++|||. +++|+.+ .+|+.+|.+
T Consensus 15 ~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~-~~~W~~~--~~~p~~r~~ 91 (315)
T 4asc_A 15 AVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHL-DSEWLGM--PPLPSPRCL 91 (315)
T ss_dssp EEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETT-TTEEEEC--CCBSSCEES
T ss_pred eEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCC-CCeEEEC--CCCCcchhc
Confidence 67899999999863322 33566667778899999999951 1 1 2458999999 9999998 689999999
Q ss_pred ceeEEecCCcEEEEcCccC-------CeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEc
Q 043369 158 ASNQILPNGKIIVVGGRFQ-------FTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFAN 229 (526)
Q Consensus 158 ~s~~~L~dG~v~viGG~~~-------~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg 229 (526)
++++++ +++|||+||.+. ..+++| |.++ +|..++.+.. ..+.+..+..+++||++||
T Consensus 92 ~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~-----~W~~~~~~p~---------~r~~~~~~~~~~~iyv~GG 156 (315)
T 4asc_A 92 FGLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSF-----KWGESDPLPY---------VVYGHTVLSHMDLVYVIGG 156 (315)
T ss_dssp CEEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTT-----EEEECCCCSS---------CCBSCEEEEETTEEEEECC
T ss_pred eeEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCC-----cEeECCCCCC---------cccceeEEEECCEEEEEeC
Confidence 999888 899999999641 368999 8877 7887654322 1234566778999999999
Q ss_pred c--------ceEEEeccCCeEEEeccCCCCCCCCccCCCCceeecccccccccccccCCCCCccCcEEEEEcCCCCCCCc
Q 043369 230 D--------RAILLDYVNNRVMKNYPVMPGGISRNYPSTGSSVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNE 301 (526)
Q Consensus 230 ~--------~~~~yDp~t~~w~~~~p~~p~~~~r~y~~~g~~v~lp~~~~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~ 301 (526)
. +.++||+.+++|. .++++|. +|.. .+++. .+++||++||....
T Consensus 157 ~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~--~r~~---~~~~~-------------------~~~~iyv~GG~~~~--- 208 (315)
T 4asc_A 157 KGSDRKCLNKMCVYDPKKFEWK-ELAPMQT--ARSL---FGATV-------------------HDGRIIVAAGVTDT--- 208 (315)
T ss_dssp BCTTSCBCCCEEEEETTTTEEE-ECCCCSS--CCBS---CEEEE-------------------ETTEEEEEEEECSS---
T ss_pred CCCCCcccceEEEEeCCCCeEE-ECCCCCC--chhc---eEEEE-------------------ECCEEEEEeccCCC---
Confidence 5 4799999999998 5776665 4653 22332 48999999997621
Q ss_pred hhhhhhcccccccceEEEEeecCCCCceec-ccCccccccceEEeCCCcEEEEcCcCCCCCCccCCC---CCccccEEEe
Q 043369 302 NAAEAQIFLPAAKSCGRLTITAQNPKWEME-EMPLNRVMGDMILLPTGDVLIINGAAKGTAGWGAAR---EPVLNPVIYC 377 (526)
Q Consensus 302 ~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvLpdG~V~vvGG~~~g~~g~~~~~---~~~~~~e~YD 377 (526)
..++.+++||+. +++|+.. +|+.+|..++++++ +++|||+||... ... .++. .....+++||
T Consensus 209 ---------~~~~~~~~yd~~--~~~W~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~-~~~-~~~~~~~~~~~~v~~yd 274 (315)
T 4asc_A 209 ---------GLTSSAEVYSIT--DNKWAPFEAFPQERSSLSLVSL-VGTLYAIGGFAT-LET-ESGELVPTELNDIWRYN 274 (315)
T ss_dssp ---------SEEEEEEEEETT--TTEEEEECCCSSCCBSCEEEEE-TTEEEEEEEEEE-EEC-TTSCEEEEEEEEEEEEE
T ss_pred ---------CccceEEEEECC--CCeEEECCCCCCcccceeEEEE-CCEEEEECCccc-cCc-CCccccccccCcEEEec
Confidence 236789999986 5899986 99999999987776 999999999752 100 0000 1234689999
Q ss_pred CCCCcEeecCCCCccccccccceecCCCEEEEecCC
Q 043369 378 PKINRFRILSPSLIPRLYHSTAHLLSDGRVLVGGSN 413 (526)
Q Consensus 378 P~t~~Wt~~a~~~~~R~yhs~a~LlpdG~V~v~GG~ 413 (526)
|++++|+.+ ++.+|..|+++++ ++++++....
T Consensus 275 ~~~~~W~~~--~~~~r~~~~~~~~--~~~l~v~~~~ 306 (315)
T 4asc_A 275 EEEKKWEGV--LREIAYAAGATFL--PVRLNVLRLT 306 (315)
T ss_dssp TTTTEEEEE--ESCSSCCSSCEEE--EEEECGGGSE
T ss_pred CCCChhhhh--ccCCcCccceEEe--CCEEEEEEeh
Confidence 999999999 6778999998777 9999998663
No 10
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=3.4e-31 Score=266.55 Aligned_cols=250 Identities=15% Similarity=0.165 Sum_probs=196.4
Q ss_pred CCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEecCCcEEEEcCccC---CeEEEE-cCCCCCCCc
Q 043369 116 NGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPNGKIIVVGGRFQ---FTYEFI-PRTSDSDRK 191 (526)
Q Consensus 116 ~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~dG~v~viGG~~~---~~~E~y-P~~~~~~~~ 191 (526)
.+.||++||... .+.+++|||. +++|..+ .+|+.+|.+++++++ +++|||+||.+. ..+++| |.++
T Consensus 11 ~~~l~~~GG~~~-~~~~~~~d~~-~~~W~~~--~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~d~~~~----- 80 (306)
T 3ii7_A 11 HDYRIALFGGSQ-PQSCRYFNPK-DYSWTDI--RCPFEKRRDAACVFW-DNVVYILGGSQLFPIKRMDCYNVVKD----- 80 (306)
T ss_dssp CCEEEEEECCSS-TTSEEEEETT-TTEEEEC--CCCSCCCBSCEEEEE-TTEEEEECCBSSSBCCEEEEEETTTT-----
T ss_pred cceEEEEeCCCC-CceEEEecCC-CCCEecC--CCCCcccceeEEEEE-CCEEEEEeCCCCCCcceEEEEeCCCC-----
Confidence 378999999854 6889999999 9999999 689999999999888 899999999762 468889 8887
Q ss_pred ceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEccc--------eEEEeccCCeEEEeccCCCCCCCCccCCCCce
Q 043369 192 ILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDR--------AILLDYVNNRVMKNYPVMPGGISRNYPSTGSS 263 (526)
Q Consensus 192 ~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~~--------~~~yDp~t~~w~~~~p~~p~~~~r~y~~~g~~ 263 (526)
+|..++.+... .+.+..++.+++||++||.+ .++||+.+++|. .++++|. +|.. .++
T Consensus 81 ~W~~~~~~p~~---------r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~-~~~~~p~--~r~~---~~~ 145 (306)
T 3ii7_A 81 SWYSKLGPPTP---------RDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWH-TKPSMLT--QRCS---HGM 145 (306)
T ss_dssp EEEEEECCSSC---------CBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEE-EECCCSS--CCBS---CEE
T ss_pred eEEECCCCCcc---------ccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceE-eCCCCcC--Ccce---eEE
Confidence 78766433221 22345566799999999953 799999999998 5777776 4653 223
Q ss_pred eecccccccccccccCCCCCccCcEEEEEcCCCCCCCchhhhhhcccccccceEEEEeecCCCCceec-ccCccccccce
Q 043369 264 VLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTITAQNPKWEME-EMPLNRVMGDM 342 (526)
Q Consensus 264 v~lp~~~~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~ 342 (526)
+. .+++||++||....... ...++++++||+. +++|+.. +|+.+|..+.+
T Consensus 146 ~~-------------------~~~~iyv~GG~~~~~~~--------~~~~~~~~~yd~~--~~~W~~~~~~p~~r~~~~~ 196 (306)
T 3ii7_A 146 VE-------------------ANGLIYVCGGSLGNNVS--------GRVLNSCEVYDPA--TETWTELCPMIEARKNHGL 196 (306)
T ss_dssp EE-------------------ETTEEEEECCEESCTTT--------CEECCCEEEEETT--TTEEEEECCCSSCCBSCEE
T ss_pred EE-------------------ECCEEEEECCCCCCCCc--------ccccceEEEeCCC--CCeEEECCCccchhhcceE
Confidence 32 48999999997522100 1127889999986 5899986 99999999998
Q ss_pred EEeCCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCcEeecCCCCccccccccceecCCCEEEEecCCCCCCCCcCC
Q 043369 343 ILLPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINRFRILSPSLIPRLYHSTAHLLSDGRVLVGGSNPNVNYNFSA 422 (526)
Q Consensus 343 vvLpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~Wt~~a~~~~~R~yhs~a~LlpdG~V~v~GG~~~~~~~~~~ 422 (526)
+++ +++||++||... ......+++|||++++|+.+++++.+|..|+++++ +++||++||.....
T Consensus 197 ~~~-~~~i~v~GG~~~--------~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~----- 260 (306)
T 3ii7_A 197 VFV-KDKIFAVGGQNG--------LGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVG----- 260 (306)
T ss_dssp EEE-TTEEEEECCEET--------TEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSS-----
T ss_pred EEE-CCEEEEEeCCCC--------CCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCe-----
Confidence 776 999999999762 12345789999999999999999999999998777 99999999964332
Q ss_pred CCCCceeeEEEcCccc
Q 043369 423 LFPTELSLQAFYPPYF 438 (526)
Q Consensus 423 ~~p~~~~vE~y~Ppyl 438 (526)
+ ..++++|+|..-
T Consensus 261 -~--~~~~~~yd~~~~ 273 (306)
T 3ii7_A 261 -R--LGHILEYNTETD 273 (306)
T ss_dssp -B--CCEEEEEETTTT
T ss_pred -e--eeeEEEEcCCCC
Confidence 1 347999999764
No 11
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.97 E-value=2.5e-30 Score=259.42 Aligned_cols=247 Identities=17% Similarity=0.179 Sum_probs=194.2
Q ss_pred CCCcEEEEcC-CCCC--ccEEEEEcCCCCCCcccccCCCCCcccccceeEEecCCcEEEEcCccC----CeEEEE-cCCC
Q 043369 115 ANGVLVQTGG-YRLG--ERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPNGKIIVVGGRFQ----FTYEFI-PRTS 186 (526)
Q Consensus 115 ~~G~l~v~GG-~~~g--~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~dG~v~viGG~~~----~~~E~y-P~~~ 186 (526)
.+++||++|| ...+ .+.+++|||. +++|..+ .+|+.+|.+++++.+ +++||++||.+. ..+++| +.++
T Consensus 13 ~~~~i~~~GG~~~~~~~~~~~~~~d~~-~~~W~~~--~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~d~~~~ 88 (301)
T 2vpj_A 13 ANEVLLVVGGFGSQQSPIDVVEKYDPK-TQEWSFL--PSITRKRRYVASVSL-HDRIYVIGGYDGRSRLSSVECLDYTAD 88 (301)
T ss_dssp CCEEEEEECCEETTTEECCCEEEEETT-TTEEEEC--CCCSSCCBSCEEEEE-TTEEEEECCBCSSCBCCCEEEEETTCC
T ss_pred CCCEEEEEeCccCCCcceeEEEEEcCC-CCeEEeC--CCCChhhccccEEEE-CCEEEEEcCCCCCccCceEEEEECCCC
Confidence 5789999999 4322 4689999999 9999998 579999999998887 899999999763 358889 8876
Q ss_pred CCCCcc---eeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEcc-------ceEEEeccCCeEEEeccCCCCCCCCc
Q 043369 187 DSDRKI---LYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFAND-------RAILLDYVNNRVMKNYPVMPGGISRN 256 (526)
Q Consensus 187 ~~~~~~---w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~-------~~~~yDp~t~~w~~~~p~~p~~~~r~ 256 (526)
+ |..++.+... .+.+..+..+++||++||. +.++||+.+++|. .++++|. +|.
T Consensus 89 -----~~~~W~~~~~~p~~---------r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~-~~~~~p~--~r~ 151 (301)
T 2vpj_A 89 -----EDGVWYSVAPMNVR---------RGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWS-MLGDMQT--ARE 151 (301)
T ss_dssp -----TTCCCEEECCCSSC---------CBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEE-EEEECSS--CCB
T ss_pred -----CCCeeEECCCCCCC---------ccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEE-ECCCCCC--Ccc
Confidence 5 8766443321 1234556679999999984 4799999999998 5777775 464
Q ss_pred cCCCCceeecccccccccccccCCCCCccCcEEEEEcCCCCCCCchhhhhhcccccccceEEEEeecCCCCceec-ccCc
Q 043369 257 YPSTGSSVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTITAQNPKWEME-EMPL 335 (526)
Q Consensus 257 y~~~g~~v~lp~~~~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~ 335 (526)
. .+++. .+++||++||.+.. ..++.+++||+. +++|+.. +|+.
T Consensus 152 ~---~~~~~-------------------~~~~iyv~GG~~~~------------~~~~~~~~~d~~--~~~W~~~~~~p~ 195 (301)
T 2vpj_A 152 G---AGLVV-------------------ASGVIYCLGGYDGL------------NILNSVEKYDPH--TGHWTNVTPMAT 195 (301)
T ss_dssp S---CEEEE-------------------ETTEEEEECCBCSS------------CBCCCEEEEETT--TTEEEEECCCSS
T ss_pred c---ceEEE-------------------ECCEEEEECCCCCC------------cccceEEEEeCC--CCcEEeCCCCCc
Confidence 3 22332 48999999997521 246789999986 5899986 9999
Q ss_pred cccccceEEeCCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCcEeecCCCCccccccccceecCCCEEEEecCCCC
Q 043369 336 NRVMGDMILLPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINRFRILSPSLIPRLYHSTAHLLSDGRVLVGGSNPN 415 (526)
Q Consensus 336 ~R~~~~~vvLpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~Wt~~a~~~~~R~yhs~a~LlpdG~V~v~GG~~~ 415 (526)
+|..++++++ +++||++||... . .....+++|||++++|+.+++++.+|.+|+++++ +++||++||...
T Consensus 196 ~r~~~~~~~~-~~~i~v~GG~~~-~-------~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~ 264 (301)
T 2vpj_A 196 KRSGAGVALL-NDHIYVVGGFDG-T-------AHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--RGRLYAIAGYDG 264 (301)
T ss_dssp CCBSCEEEEE-TTEEEEECCBCS-S-------SBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCS
T ss_pred ccccceEEEE-CCEEEEEeCCCC-C-------cccceEEEEeCCCCcEEECCCCCCcccceeEEEE--CCEEEEEcCcCC
Confidence 9999887776 999999999762 1 1245789999999999999999999999997776 999999999543
Q ss_pred CCCCcCCCCCCceeeEEEcCcc
Q 043369 416 VNYNFSALFPTELSLQAFYPPY 437 (526)
Q Consensus 416 ~~~~~~~~~p~~~~vE~y~Ppy 437 (526)
.. ...++|+|+|..
T Consensus 265 ~~--------~~~~v~~yd~~~ 278 (301)
T 2vpj_A 265 NS--------LLSSIECYDPII 278 (301)
T ss_dssp SS--------BEEEEEEEETTT
T ss_pred Cc--------ccccEEEEcCCC
Confidence 31 135799999875
No 12
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.97 E-value=6.1e-30 Score=263.02 Aligned_cols=262 Identities=14% Similarity=0.102 Sum_probs=186.7
Q ss_pred eCccCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCC-CCCcccccCCCCC-cccccceeEEecCCcEEEEcCc-c
Q 043369 99 PLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCS-DCDWEEDHQNGLI-SPRWYASNQILPNGKIIVVGGR-F 175 (526)
Q Consensus 99 ~~~~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~-t~~W~~~~~~~m~-~~R~y~s~~~L~dG~v~viGG~-~ 175 (526)
+++.++..++.+.+++.+++||++||.. .+.+++||+.. +++|..+ .+|+ .+|.+++++++ +|+|||+||. +
T Consensus 2 ~l~~lP~~r~~~~~~~~~~~iyv~GG~~--~~~~~~~d~~~~~~~W~~~--~~~p~~~R~~~~~~~~-~~~lyv~GG~~~ 76 (357)
T 2uvk_A 2 VLPETPVPFKSGTGAIDNDTVYIGLGSA--GTAWYKLDTQAKDKKWTAL--AAFPGGPRDQATSAFI-DGNLYVFGGIGK 76 (357)
T ss_dssp CSCCCSSCCCSCEEEEETTEEEEECGGG--TTCEEEEETTSSSCCEEEC--CCCTTCCCBSCEEEEE-TTEEEEECCEEE
T ss_pred CCCCCCccccceEEEEECCEEEEEeCcC--CCeEEEEccccCCCCeeEC--CCCCCCcCccceEEEE-CCEEEEEcCCCC
Confidence 3455666667766777799999999974 35799999972 3899999 6899 89999999888 8999999998 3
Q ss_pred --------CCeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEc-----------------
Q 043369 176 --------QFTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFAN----------------- 229 (526)
Q Consensus 176 --------~~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg----------------- 229 (526)
...+++| |.++ +|..++.+.. ...+.+..+..+++||++||
T Consensus 77 ~~~~~~~~~~~v~~yd~~~~-----~W~~~~~~~p--------~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~ 143 (357)
T 2uvk_A 77 NSEGLTQVFNDVHKYNPKTN-----SWVKLMSHAP--------MGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAG 143 (357)
T ss_dssp CTTSCEEECCCEEEEETTTT-----EEEECSCCCS--------SCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHT
T ss_pred CCCccceeeccEEEEeCCCC-----cEEECCCCCC--------cccccceEEEECCEEEEEeCcCCCcCcccccchhhcC
Confidence 1368999 8887 8887654431 12234555668999999998
Q ss_pred ------------------------cceEEEeccCCeEEEeccCCCCCCCCccCCCCceeecccccccccccccCCCCCcc
Q 043369 230 ------------------------DRAILLDYVNNRVMKNYPVMPGGISRNYPSTGSSVLLPVNLSSINVHINNNNKPVV 285 (526)
Q Consensus 230 ------------------------~~~~~yDp~t~~w~~~~p~~p~~~~r~y~~~g~~v~lp~~~~~~~~~~~~~~~~~~ 285 (526)
+++++||+.+++|. .++++|.. |.+ ..+++. .
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~-~~~~~p~~--~~~--~~~~~~-------------------~ 199 (357)
T 2uvk_A 144 KDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWS-YAGESPWY--GTA--GAAVVN-------------------K 199 (357)
T ss_dssp TCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEE-EEEECSSC--CCB--SCEEEE-------------------E
T ss_pred CcccchhhhhhhhccccccccCCcccEEEEeCCCCcEE-ECCCCCCC--Ccc--cccEEE-------------------E
Confidence 35789999999998 46766653 332 122222 4
Q ss_pred CcEEEEEcCCCCCCCchhhhhhcccccccceEEEEeecCCCCceec-ccCcccc--ccceEEeCCCcEEEEcCcCCCCC-
Q 043369 286 HSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTITAQNPKWEME-EMPLNRV--MGDMILLPTGDVLIINGAAKGTA- 361 (526)
Q Consensus 286 ~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~--~~~~vvLpdG~V~vvGG~~~g~~- 361 (526)
+++||++||.... ...++.+++||+...+++|+.. +|+.+|. .+++++ .+++|||+||......
T Consensus 200 ~~~iyv~GG~~~~-----------~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~ 267 (357)
T 2uvk_A 200 GDKTWLINGEAKP-----------GLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGI-SNDSLIFAGGAGFKGSR 267 (357)
T ss_dssp TTEEEEECCEEET-----------TEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEE-ETTEEEEECCEECTTHH
T ss_pred CCEEEEEeeecCC-----------CcccCceEEEEecCCCCcEEecCCCCCCcccccceEEE-ECCEEEEEcCccccCCc
Confidence 8999999997421 1235677888873336899986 8877754 444555 4999999999742100
Q ss_pred -----C--c-cCCCCCccccEEEeCCCCcEeecCCCCccccccccceecCCCEEEEecCCCCC
Q 043369 362 -----G--W-GAAREPVLNPVIYCPKINRFRILSPSLIPRLYHSTAHLLSDGRVLVGGSNPNV 416 (526)
Q Consensus 362 -----g--~-~~~~~~~~~~e~YDP~t~~Wt~~a~~~~~R~yhs~a~LlpdG~V~v~GG~~~~ 416 (526)
+ | ......+.++|+|||++++|+.+++++.+|.+|+++++ +++|||+||....
T Consensus 268 ~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~ 328 (357)
T 2uvk_A 268 ENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPW--NNSLLIIGGETAG 328 (357)
T ss_dssp HHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEEEE--TTEEEEEEEECGG
T ss_pred ccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeEEe--CCEEEEEeeeCCC
Confidence 0 0 00122345789999999999999999999999987665 9999999996543
No 13
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.96 E-value=4.4e-29 Score=252.54 Aligned_cols=251 Identities=12% Similarity=0.073 Sum_probs=187.3
Q ss_pred CCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEecCCcEEEEcCcc----C------CeEEEE-cC
Q 043369 116 NGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPNGKIIVVGGRF----Q------FTYEFI-PR 184 (526)
Q Consensus 116 ~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~dG~v~viGG~~----~------~~~E~y-P~ 184 (526)
...|+++|| +.+.+|||. +++|... +.+.+.+|.+++++++ +++||++||.. . ..+++| |.
T Consensus 4 ~~~l~~~GG-----~~~~~yd~~-~~~W~~~-~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~ 75 (315)
T 4asc_A 4 QDLIFMISE-----EGAVAYDPA-ANECYCA-SLSSQVPKNHVSLVTK-ENQVFVAGGLFYNEDNKEDPMSAYFLQFDHL 75 (315)
T ss_dssp EEEEEEEET-----TEEEEEETT-TTEEEEE-ECCCCSCSSEEEEECT-TCCEEEEEEEEECSSCSSSCEEEEEEEEETT
T ss_pred ceEEEEEcC-----CceEEECCC-CCeEecC-CCCCCCCccceEEEEE-CCEEEEEcCcccCCCCCccccccceEEecCC
Confidence 457889999 479999999 9999864 2233568998888877 89999999952 1 136788 88
Q ss_pred CCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEcc----------ceEEEeccCCeEEEeccCCCCCCC
Q 043369 185 TSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFAND----------RAILLDYVNNRVMKNYPVMPGGIS 254 (526)
Q Consensus 185 ~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~----------~~~~yDp~t~~w~~~~p~~p~~~~ 254 (526)
++ +|..++.+... .+.+..+..+++||++||. ++++||+.+++|. .++++|. +
T Consensus 76 ~~-----~W~~~~~~p~~---------r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~-~~~~~p~--~ 138 (315)
T 4asc_A 76 DS-----EWLGMPPLPSP---------RCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWG-ESDPLPY--V 138 (315)
T ss_dssp TT-----EEEECCCBSSC---------EESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEE-ECCCCSS--C
T ss_pred CC-----eEEECCCCCcc---------hhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEe-ECCCCCC--c
Confidence 76 78876544321 1234566679999999993 3799999999998 5777766 4
Q ss_pred CccCCCCceeecccccccccccccCCCCCccCcEEEEEcCCCCCCCchhhhhhcccccccceEEEEeecCCCCceec-cc
Q 043369 255 RNYPSTGSSVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTITAQNPKWEME-EM 333 (526)
Q Consensus 255 r~y~~~g~~v~lp~~~~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M 333 (526)
|.. .+++. .+++||++||...+ ...++.+++||+. +++|+.. +|
T Consensus 139 r~~---~~~~~-------------------~~~~iyv~GG~~~~-----------~~~~~~~~~yd~~--~~~W~~~~~~ 183 (315)
T 4asc_A 139 VYG---HTVLS-------------------HMDLVYVIGGKGSD-----------RKCLNKMCVYDPK--KFEWKELAPM 183 (315)
T ss_dssp CBS---CEEEE-------------------ETTEEEEECCBCTT-----------SCBCCCEEEEETT--TTEEEECCCC
T ss_pred ccc---eeEEE-------------------ECCEEEEEeCCCCC-----------CcccceEEEEeCC--CCeEEECCCC
Confidence 643 22332 48999999997422 2347889999986 5899986 99
Q ss_pred CccccccceEEeCCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCcEeecCCCCccccccccceecCCCEEEEecCC
Q 043369 334 PLNRVMGDMILLPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINRFRILSPSLIPRLYHSTAHLLSDGRVLVGGSN 413 (526)
Q Consensus 334 ~~~R~~~~~vvLpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~Wt~~a~~~~~R~yhs~a~LlpdG~V~v~GG~ 413 (526)
|.+|..++++++ +++|||+||... ......+++|||++++|+.+++|+.+|..|+++++ +++||+.||.
T Consensus 184 p~~r~~~~~~~~-~~~iyv~GG~~~--------~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~l~v~GG~ 252 (315)
T 4asc_A 184 QTARSLFGATVH-DGRIIVAAGVTD--------TGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVSL--VGTLYAIGGF 252 (315)
T ss_dssp SSCCBSCEEEEE-TTEEEEEEEECS--------SSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEE
T ss_pred CCchhceEEEEE-CCEEEEEeccCC--------CCccceEEEEECCCCeEEECCCCCCcccceeEEEE--CCEEEEECCc
Confidence 999999998776 999999999762 12345789999999999999999999999987776 9999999996
Q ss_pred CCCCCCcCCCC--CCceeeEEEcCccc
Q 043369 414 PNVNYNFSALF--PTELSLQAFYPPYF 438 (526)
Q Consensus 414 ~~~~~~~~~~~--p~~~~vE~y~Ppyl 438 (526)
..... ..+.+ -...++|+|+|..-
T Consensus 253 ~~~~~-~~~~~~~~~~~~v~~yd~~~~ 278 (315)
T 4asc_A 253 ATLET-ESGELVPTELNDIWRYNEEEK 278 (315)
T ss_dssp EEEEC-TTSCEEEEEEEEEEEEETTTT
T ss_pred cccCc-CCccccccccCcEEEecCCCC
Confidence 42110 00100 01347999999764
No 14
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.96 E-value=1.1e-28 Score=249.94 Aligned_cols=251 Identities=15% Similarity=0.144 Sum_probs=186.4
Q ss_pred CCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEecCCcEEEEcCcc----C------CeEEEE-cC
Q 043369 116 NGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPNGKIIVVGGRF----Q------FTYEFI-PR 184 (526)
Q Consensus 116 ~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~dG~v~viGG~~----~------~~~E~y-P~ 184 (526)
++.||++||. .+++|||. +++|... +.+.+.+|..++++++ +++||++||.. . ..+++| |.
T Consensus 15 ~~~i~~~GG~-----~~~~yd~~-~~~W~~~-~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~ 86 (318)
T 2woz_A 15 KDLILLVNDT-----AAVAYDPM-ENECYLT-ALAEQIPRNHSSIVTQ-QNQVYVVGGLYVDEENKDQPLQSYFFQLDNV 86 (318)
T ss_dssp EEEEEEECSS-----EEEEEETT-TTEEEEE-EECTTSCSSEEEEECS-SSCEEEEESSCC-------CCCBEEEEEETT
T ss_pred cchhhhcccc-----ceEEECCC-CCceecc-cCCccCCccceEEEEE-CCEEEEECCcccCccccCCCccccEEEEeCC
Confidence 5689999995 48999999 9999885 2234478988887766 89999999952 1 127788 88
Q ss_pred CCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEcc---------ceEEEeccCCeEEEeccCCCCCCCC
Q 043369 185 TSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFAND---------RAILLDYVNNRVMKNYPVMPGGISR 255 (526)
Q Consensus 185 ~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~---------~~~~yDp~t~~w~~~~p~~p~~~~r 255 (526)
++ +|..++.+... .+.+..++.+++||++||. ++++||+.+++|. .++++|. +|
T Consensus 87 ~~-----~W~~~~~~p~~---------r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~--~r 149 (318)
T 2woz_A 87 SS-----EWVGLPPLPSA---------RCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWS-EVKNLPI--KV 149 (318)
T ss_dssp TT-----EEEECSCBSSC---------BCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEE-EECCCSS--CE
T ss_pred CC-----cEEECCCCCcc---------ccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEe-ECCCCCC--cc
Confidence 76 88876544321 1234566679999999994 3799999999998 5776665 36
Q ss_pred ccCCCCceeecccccccccccccCCCCCccCcEEEEEcCCCCCCCchhhhhhcccccccceEEEEeecCCCCceec-ccC
Q 043369 256 NYPSTGSSVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTITAQNPKWEME-EMP 334 (526)
Q Consensus 256 ~y~~~g~~v~lp~~~~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~ 334 (526)
.. .+++. .+++||++||...+ ...++.+++||+. +++|+.. +|+
T Consensus 150 ~~---~~~~~-------------------~~~~iyv~GG~~~~-----------~~~~~~~~~yd~~--~~~W~~~~~~p 194 (318)
T 2woz_A 150 YG---HNVIS-------------------HNGMIYCLGGKTDD-----------KKCTNRVFIYNPK--KGDWKDLAPMK 194 (318)
T ss_dssp ES---CEEEE-------------------ETTEEEEECCEESS-----------SCBCCCEEEEETT--TTEEEEECCCS
T ss_pred cc---cEEEE-------------------ECCEEEEEcCCCCC-----------CCccceEEEEcCC--CCEEEECCCCC
Confidence 43 22332 48999999997421 1346789999986 5899986 999
Q ss_pred ccccccceEEeCCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCcEeecCCCCccccccccceecCCCEEEEecCCC
Q 043369 335 LNRVMGDMILLPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINRFRILSPSLIPRLYHSTAHLLSDGRVLVGGSNP 414 (526)
Q Consensus 335 ~~R~~~~~vvLpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~Wt~~a~~~~~R~yhs~a~LlpdG~V~v~GG~~ 414 (526)
.+|..++++++ +++|||+||... ......+|+|||++++|+.+++++.+|..|+++++ +++||+.||..
T Consensus 195 ~~r~~~~~~~~-~~~iyv~GG~~~--------~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~ 263 (318)
T 2woz_A 195 TPRSMFGVAIH-KGKIVIAGGVTE--------DGLSASVEAFDLKTNKWEVMTEFPQERSSISLVSL--AGSLYAIGGFA 263 (318)
T ss_dssp SCCBSCEEEEE-TTEEEEEEEEET--------TEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEEE--TTEEEEECCBC
T ss_pred CCcccceEEEE-CCEEEEEcCcCC--------CCccceEEEEECCCCeEEECCCCCCcccceEEEEE--CCEEEEECCee
Confidence 99999987776 999999999762 11244789999999999999999999999987766 99999999965
Q ss_pred CCCCCcCCCC-C-CceeeEEEcCccc
Q 043369 415 NVNYNFSALF-P-TELSLQAFYPPYF 438 (526)
Q Consensus 415 ~~~~~~~~~~-p-~~~~vE~y~Ppyl 438 (526)
..... .+.. + ...++++|+|...
T Consensus 264 ~~~~~-~~~~~~~~~~~v~~yd~~~~ 288 (318)
T 2woz_A 264 MIQLE-SKEFAPTEVNDIWKYEDDKK 288 (318)
T ss_dssp CBC-----CCBCCBCCCEEEEETTTT
T ss_pred ccCCC-CceeccceeeeEEEEeCCCC
Confidence 42100 0100 0 1347899998764
No 15
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.96 E-value=8.1e-29 Score=275.99 Aligned_cols=295 Identities=12% Similarity=0.120 Sum_probs=202.3
Q ss_pred EEEEeCCCCcEEeCccCCccccccceEcC-CCcEEEEcCCCC--------CccEEEEEcCCCCCCcccccCCCCCccccc
Q 043369 87 AVEFDPITRKVRPLTIQTDTWCSSGALLA-NGVLVQTGGYRL--------GERVVRYLKPCSDCDWEEDHQNGLISPRWY 157 (526)
Q Consensus 87 ~~~yDp~t~~w~~~~~~~~~fc~~~~~l~-~G~l~v~GG~~~--------g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y 157 (526)
...|||.+++|+++..++.. ..+.++++ +|+||++||... +...+++|||. +++|+.+ ..|+.+|..
T Consensus 168 ~~~~dp~~~~W~~~~~~P~~-~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~-t~~w~~~--~~~~~~~~~ 243 (656)
T 1k3i_A 168 YTAPQPGLGRWGPTIDLPIV-PAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPS-TGIVSDR--TVTVTKHDM 243 (656)
T ss_dssp CCCCCTTSCEEEEEEECSSC-CSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTT-TCCBCCC--EEEECSCCC
T ss_pred cccCCCCCCeeeeeccCCCC-ceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCC-CCcEEeC--cccCCCCCC
Confidence 45689999999988766552 23344555 999999999742 23478999999 9999998 568777754
Q ss_pred c--eeEEecCCcEEEEcCccCCeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEc-----
Q 043369 158 A--SNQILPNGKIIVVGGRFQFTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFAN----- 229 (526)
Q Consensus 158 ~--s~~~L~dG~v~viGG~~~~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg----- 229 (526)
+ +++++.||+||++||.+...+++| |.++ +|..++.+... ..|+.+.+++||+||++||
T Consensus 244 ~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~-----~W~~~~~~~~~--------R~~~s~~~~~dg~iyv~GG~~~~~ 310 (656)
T 1k3i_A 244 FCPGISMDGNGQIVVTGGNDAKKTSLYDSSSD-----SWIPGPDMQVA--------RGYQSSATMSDGRVFTIGGSWSGG 310 (656)
T ss_dssp SSCEEEECTTSCEEEECSSSTTCEEEEEGGGT-----EEEECCCCSSC--------CSSCEEEECTTSCEEEECCCCCSS
T ss_pred ccccccCCCCCCEEEeCCCCCCceEEecCcCC-----ceeECCCCCcc--------ccccceEEecCCeEEEEeCcccCC
Confidence 4 466677999999999877789999 9887 88876544321 2455555566999999999
Q ss_pred ---cceEEEeccCCeEEEeccCC---CCCCCCccCCCCceeecccccccccccccCCCCCccCcEEEEEcCCCCCCCchh
Q 043369 230 ---DRAILLDYVNNRVMKNYPVM---PGGISRNYPSTGSSVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENA 303 (526)
Q Consensus 230 ---~~~~~yDp~t~~w~~~~p~~---p~~~~r~y~~~g~~v~lp~~~~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~ 303 (526)
.+.|+||+.+++|. .++.. |+...|. ..++ ..+++||++||.+...+.
T Consensus 311 ~~~~~~e~yd~~t~~W~-~~~~~~~~p~~~~~~----~~~~-------------------~~~~~iyv~Gg~~g~~~~-- 364 (656)
T 1k3i_A 311 VFEKNGEVYSPSSKTWT-SLPNAKVNPMLTADK----QGLY-------------------RSDNHAWLFGWKKGSVFQ-- 364 (656)
T ss_dssp SCCCCEEEEETTTTEEE-EETTSCSGGGCCCCT----TGGG-------------------TTTCSCCEEECGGGCEEE--
T ss_pred cccccceEeCCCCCcce-eCCCccccccccccc----ccee-------------------ecCCceEEEECCCCcEEE--
Confidence 35799999999998 45321 2321221 1111 148899999997521110
Q ss_pred hhhhcccccccceEEEEeecCCCCceec--ccCc------cccccceEEe--CCCcEEEEcCcCCCCCCccCCCCCcccc
Q 043369 304 AEAQIFLPAAKSCGRLTITAQNPKWEME--EMPL------NRVMGDMILL--PTGDVLIINGAAKGTAGWGAAREPVLNP 373 (526)
Q Consensus 304 ~~~~~~~~a~~s~~~~d~~~~~~~W~~~--~M~~------~R~~~~~vvL--pdG~V~vvGG~~~g~~g~~~~~~~~~~~ 373 (526)
...++.+++||+. .+.|... .++. +|..+.++++ .+|+|||+||... ..+. ...+....+
T Consensus 365 ------~~~~~~v~~yd~~--~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~-~~~~-~~~~~~~~v 434 (656)
T 1k3i_A 365 ------AGPSTAMNWYYTS--GSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPD-YQDS-DATTNAHII 434 (656)
T ss_dssp ------CCSSSEEEEEECS--TTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSS-SSSS-BCCCCEEEE
T ss_pred ------ecCccceeeeecC--CcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCC-CCCC-CcCCcceEE
Confidence 1236788999986 4777642 3333 3445565553 4899999999752 1100 011223368
Q ss_pred EEEeCCCCcEeecC--CCCccccccccceecCCCEEEEecCCCCCCCCcCCCCCCceeeEEEcCcc
Q 043369 374 VIYCPKINRFRILS--PSLIPRLYHSTAHLLSDGRVLVGGSNPNVNYNFSALFPTELSLQAFYPPY 437 (526)
Q Consensus 374 e~YDP~t~~Wt~~a--~~~~~R~yhs~a~LlpdG~V~v~GG~~~~~~~~~~~~p~~~~vE~y~Ppy 437 (526)
++|||.+++|+.++ +|+.+|..|++ +++|||+|||+||...... +.+.. ...++|+|+|.-
T Consensus 435 ~~yd~~~~~W~~~~~~~mp~~R~~~~~-~~l~~g~i~v~GG~~~~~~-~~~~~-~~~~v~~ydp~t 497 (656)
T 1k3i_A 435 TLGEPGTSPNTVFASNGLYFARTFHTS-VVLPDGSTFITGGQRRGIP-FEDST-PVFTPEIYVPEQ 497 (656)
T ss_dssp ECCSTTSCCEEEECTTCCSSCCBSCEE-EECTTSCEEEECCBSBCCT-TCCCS-BCCCCEEEEGGG
T ss_pred EcCCCCCCCeeEEccCCCCCCcccCCe-EECCCCCEEEECCcccCcC-cCCCC-cccceEEEcCCC
Confidence 99999999999987 99999999984 5568999999999643210 11111 135799999976
No 16
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.96 E-value=4e-28 Score=249.46 Aligned_cols=284 Identities=17% Similarity=0.122 Sum_probs=195.1
Q ss_pred cccCCccceeEEEEecCCeEEEEecccCCCCCccCCCCccccCccccCCCCcceEEEEeCC--CCcEEeCccCC-ccccc
Q 043369 33 LKRSIGVSAMHMALLPNDRIIAFDRSHFGPSNITLPQGKCIKGVELETSDCYAHAVEFDPI--TRKVRPLTIQT-DTWCS 109 (526)
Q Consensus 33 ~~~~~~v~~~~~a~l~~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~yDp~--t~~w~~~~~~~-~~fc~ 109 (526)
+++++..+.-|++++.+++||++||... ....+||+. +++|+.++.++ ..++.
T Consensus 3 l~~lP~~r~~~~~~~~~~~iyv~GG~~~------------------------~~~~~~d~~~~~~~W~~~~~~p~~~R~~ 58 (357)
T 2uvk_A 3 LPETPVPFKSGTGAIDNDTVYIGLGSAG------------------------TAWYKLDTQAKDKKWTALAAFPGGPRDQ 58 (357)
T ss_dssp SCCCSSCCCSCEEEEETTEEEEECGGGT------------------------TCEEEEETTSSSCCEEECCCCTTCCCBS
T ss_pred CCCCCccccceEEEEECCEEEEEeCcCC------------------------CeEEEEccccCCCCeeECCCCCCCcCcc
Confidence 3333433455777777999999999741 136789998 49999999877 67777
Q ss_pred cceEcCCCcEEEEcCC-C--CC----ccEEEEEcCCCCCCcccccCCCCC-cccccceeEEecCCcEEEEcCccC-----
Q 043369 110 SGALLANGVLVQTGGY-R--LG----ERVVRYLKPCSDCDWEEDHQNGLI-SPRWYASNQILPNGKIIVVGGRFQ----- 176 (526)
Q Consensus 110 ~~~~l~~G~l~v~GG~-~--~g----~~~v~~ydp~~t~~W~~~~~~~m~-~~R~y~s~~~L~dG~v~viGG~~~----- 176 (526)
.+++..+++||++||. . ++ .+.+++|||. +++|+.+ .+|+ .+|..++++++ +++|||+||.+.
T Consensus 59 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~-~~~W~~~--~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~ 134 (357)
T 2uvk_A 59 ATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPK-TNSWVKL--MSHAPMGMAGHVTFVH-NGKAYVTGGVNQNIFNG 134 (357)
T ss_dssp CEEEEETTEEEEECCEEECTTSCEEECCCEEEEETT-TTEEEEC--SCCCSSCCSSEEEEEE-TTEEEEEECCCHHHHHH
T ss_pred ceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCC-CCcEEEC--CCCCCcccccceEEEE-CCEEEEEeCcCCCcCcc
Confidence 7788889999999998 2 11 4689999999 9999998 5788 99999988886 899999999652
Q ss_pred ---------------------------------CeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCC
Q 043369 177 ---------------------------------FTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDG 222 (526)
Q Consensus 177 ---------------------------------~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG 222 (526)
..+|+| |.++ +|..++.+... ..+.+..+..++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~-----~W~~~~~~p~~--------~~~~~~~~~~~~ 201 (357)
T 2uvk_A 135 YFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQ-----QWSYAGESPWY--------GTAGAAVVNKGD 201 (357)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTT-----EEEEEEECSSC--------CCBSCEEEEETT
T ss_pred cccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCC-----cEEECCCCCCC--------CcccccEEEECC
Confidence 468999 8887 78765322211 112245566799
Q ss_pred cEEEEEcc--------ceEEEec--cCCeEEEeccCCCCCCCCccCCCCceeecccccccccccccCCCCCccCcEEEEE
Q 043369 223 NLFIFAND--------RAILLDY--VNNRVMKNYPVMPGGISRNYPSTGSSVLLPVNLSSINVHINNNNKPVVHSQVLIC 292 (526)
Q Consensus 223 ~Iy~~Gg~--------~~~~yDp--~t~~w~~~~p~~p~~~~r~y~~~g~~v~lp~~~~~~~~~~~~~~~~~~~gkI~v~ 292 (526)
+||++||. ..++||+ .+++|. .++.+|.. |... ..+++. .+++||++
T Consensus 202 ~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~-~~~~~~~~--~~~~-~~~~~~-------------------~~~~iyv~ 258 (357)
T 2uvk_A 202 KTWLINGEAKPGLRTDAVFELDFTGNNLKWN-KLAPVSSP--DGVA-GGFAGI-------------------SNDSLIFA 258 (357)
T ss_dssp EEEEECCEEETTEECCCEEEEECC---CEEE-ECCCSSTT--TCCB-SCEEEE-------------------ETTEEEEE
T ss_pred EEEEEeeecCCCcccCceEEEEecCCCCcEE-ecCCCCCC--cccc-cceEEE-------------------ECCEEEEE
Confidence 99999984 3567875 899998 57766553 3211 122332 48999999
Q ss_pred cCCCCCCCchhh-hh-h--c-ccccccceEEEEeecCCCCceec-ccCccccccceEEeCCCcEEEEcCcCCCCCCccCC
Q 043369 293 GGTLPDSNENAA-EA-Q--I-FLPAAKSCGRLTITAQNPKWEME-EMPLNRVMGDMILLPTGDVLIINGAAKGTAGWGAA 366 (526)
Q Consensus 293 GG~~~~~~~~~~-~~-~--~-~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvLpdG~V~vvGG~~~g~~g~~~~ 366 (526)
||.......... .+ . . ....+.++++||+. +++|+.. +||.+|..+.++++ +++|||+||.+..
T Consensus 259 GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~--~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~------- 328 (357)
T 2uvk_A 259 GGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWH--NGKWDKSGELSQGRAYGVSLPW-NNSLLIIGGETAG------- 328 (357)
T ss_dssp CCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC-----CEEEEECSSCCBSSEEEEE-TTEEEEEEEECGG-------
T ss_pred cCccccCCcccccccceeccccccceeeEEEEecC--CCceeeCCCCCCCcccceeEEe-CCEEEEEeeeCCC-------
Confidence 996421100000 00 0 0 01224678999986 5899986 99999999887665 9999999997621
Q ss_pred CCCccccEEEeCCCCcEeecCCCC
Q 043369 367 REPVLNPVIYCPKINRFRILSPSL 390 (526)
Q Consensus 367 ~~~~~~~e~YDP~t~~Wt~~a~~~ 390 (526)
.....++++|+.++++|.+..+.+
T Consensus 329 ~~~~~~v~~l~~~~~~~~~~~~~~ 352 (357)
T 2uvk_A 329 GKAVTDSVLITVKDNKVTVQNLEH 352 (357)
T ss_dssp GCEEEEEEEEEC-CCSCEEEC---
T ss_pred CCEeeeEEEEEEcCcEeEeeeccc
Confidence 112457899999999999876654
No 17
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.93 E-value=8e-25 Score=245.28 Aligned_cols=248 Identities=13% Similarity=0.108 Sum_probs=175.4
Q ss_pred ceEcCCCcEEEEcCCCC-CccEEEEEcCCCCCCccccc-C---CCCCcccccceeEEec-CCcEEEEcCccC-----CeE
Q 043369 111 GALLANGVLVQTGGYRL-GERVVRYLKPCSDCDWEEDH-Q---NGLISPRWYASNQILP-NGKIIVVGGRFQ-----FTY 179 (526)
Q Consensus 111 ~~~l~~G~l~v~GG~~~-g~~~v~~ydp~~t~~W~~~~-~---~~m~~~R~y~s~~~L~-dG~v~viGG~~~-----~~~ 179 (526)
+++..+++||++||... ..+.+++|||. +++|+..+ + ..|+.+|++|+++++. +|+|||+||.+. ..+
T Consensus 392 ~~~~~~~~iyv~GG~~~~~~~~v~~yd~~-~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv 470 (695)
T 2zwa_A 392 DVDVAGNDVFYMGGSNPYRVNEILQLSIH-YDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDN 470 (695)
T ss_dssp EEEECSSCEEEECCBSSSBCCCEEEEEEC-SSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCC
T ss_pred EEEEECCEEEEECCCCCCCcCcEEEEECC-CCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccE
Confidence 45558999999999743 24689999999 99999883 1 1389999999999987 899999999864 358
Q ss_pred EEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEe-cCCcEEEEEcc----ceEEEeccCCeEEEeccC---CC
Q 043369 180 EFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLS-TDGNLFIFAND----RAILLDYVNNRVMKNYPV---MP 250 (526)
Q Consensus 180 E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~-~dG~Iy~~Gg~----~~~~yDp~t~~w~~~~p~---~p 250 (526)
++| +.++ +|..++.+... .+-|..++ .+|+||++||. +.++||+.+++|. .++. +|
T Consensus 471 ~~yd~~t~-----~W~~~~~~p~~---------R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~-~~~~~g~~p 535 (695)
T 2zwa_A 471 WIFDMKTR-----EWSMIKSLSHT---------RFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFK-DVTPKDEFF 535 (695)
T ss_dssp EEEETTTT-----EEEECCCCSBC---------CBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEE-ECCCSSGGG
T ss_pred EEEeCCCC-----cEEECCCCCCC---------cccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceE-EccCCCCCC
Confidence 899 8877 78876433221 12345555 59999999997 6899999999998 4553 33
Q ss_pred CCCCCccCCCCceeecccccccccccccCCCCCccCcEEEEEcCCCCCCCchhhhhhcccccccceEEEEeecCCCC---
Q 043369 251 GGISRNYPSTGSSVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTITAQNPK--- 327 (526)
Q Consensus 251 ~~~~r~y~~~g~~v~lp~~~~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~--- 327 (526)
. +|.. ++++++ . ...++||++||...+. ...++.+++||+. +++
T Consensus 536 ~--~r~~--~~a~v~-~----------------~~~~~iyv~GG~~~~~----------~~~~~~v~~yd~~--~~~w~~ 582 (695)
T 2zwa_A 536 Q--NSLV--SAGLEF-D----------------PVSKQGIILGGGFMDQ----------TTVSDKAIIFKYD--AENATE 582 (695)
T ss_dssp G--SCCB--SCEEEE-E----------------TTTTEEEEECCBCTTS----------SCBCCEEEEEEEC--TTCSSC
T ss_pred C--cccc--eeEEEE-e----------------CCCCEEEEECCcCCCC----------CeeeCcEEEEEcc--CCcccc
Confidence 3 4643 222221 1 0138999999975221 1346789999997 466
Q ss_pred ---ceec-cc-CccccccceEEeCCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCcEeecCCCCc--------ccc
Q 043369 328 ---WEME-EM-PLNRVMGDMILLPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINRFRILSPSLI--------PRL 394 (526)
Q Consensus 328 ---W~~~-~M-~~~R~~~~~vvLpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~Wt~~a~~~~--------~R~ 394 (526)
|+.. +| +.+|..++++++-||+|||+||.... . .......+++|||.+++|+.+. ++. .|.
T Consensus 583 ~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~-~----~~~~~~~v~~yd~~t~~W~~~~-~p~~~~~~~~p~~~ 656 (695)
T 2zwa_A 583 PITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPS-G----LFDRTNSIISLDPLSETLTSIP-ISRRIWEDHSLMLA 656 (695)
T ss_dssp CEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSS-C----CCCTTTSEEEEETTTTEEEECC-CCHHHHHHSCCCCS
T ss_pred ceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCC-C----CCCCCCeEEEEECCCCeEEEee-ccccccCCCCccce
Confidence 8875 66 58999998887733999999997521 1 0123457999999999999643 221 244
Q ss_pred ccccceecCCCEEEEecCCC
Q 043369 395 YHSTAHLLSDGRVLVGGSNP 414 (526)
Q Consensus 395 yhs~a~LlpdG~V~v~GG~~ 414 (526)
.|+ ++.+.||+|||+||+.
T Consensus 657 gh~-~~~~~~g~i~v~GGg~ 675 (695)
T 2zwa_A 657 GFS-LVSTSMGTIHIIGGGA 675 (695)
T ss_dssp SCE-EECC---CEEEECCEE
T ss_pred eee-EEEeCCCEEEEEeCCc
Confidence 577 4556788999999963
No 18
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.91 E-value=3.5e-23 Score=231.99 Aligned_cols=255 Identities=15% Similarity=0.118 Sum_probs=176.0
Q ss_pred cEEEcccCCccceeEEEEecCCeEEEEecccCCCCCccCCCCccccCccccCCCCcceEEEEeCCCCcEEeCc-c-----
Q 043369 29 KWKLLKRSIGVSAMHMALLPNDRIIAFDRSHFGPSNITLPQGKCIKGVELETSDCYAHAVEFDPITRKVRPLT-I----- 102 (526)
Q Consensus 29 ~W~~~~~~~~v~~~~~a~l~~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~yDp~t~~w~~~~-~----- 102 (526)
+|..... .+.+..++++..+++||++||... . ....+.+||+.+++|+.++ .
T Consensus 378 ~~~~~~~-~p~rr~g~~~~~~~~iyv~GG~~~--~-------------------~~~~v~~yd~~~~~W~~~~~~~p~~~ 435 (695)
T 2zwa_A 378 QLLECEC-PINRKFGDVDVAGNDVFYMGGSNP--Y-------------------RVNEILQLSIHYDKIDMKNIEVSSSE 435 (695)
T ss_dssp EEEECCC-TTCCBSCEEEECSSCEEEECCBSS--S-------------------BCCCEEEEEECSSCEEEEECCCCCSC
T ss_pred eEeccCC-CCCCceeEEEEECCEEEEECCCCC--C-------------------CcCcEEEEECCCCeEEEeccCCCCCC
Confidence 3444432 223334444448999999999752 1 1135789999999999887 3
Q ss_pred CCccccccceEcC--CCcEEEEcCCCCC---ccEEEEEcCCCCCCcccccCCCCCcccccceeEEecCCcEEEEcCccCC
Q 043369 103 QTDTWCSSGALLA--NGVLVQTGGYRLG---ERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPNGKIIVVGGRFQF 177 (526)
Q Consensus 103 ~~~~fc~~~~~l~--~G~l~v~GG~~~g---~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~dG~v~viGG~~~~ 177 (526)
++..++..+++.. +|+||++||.... .+.+++||+. +++|+.. .+|+.+|++|+++++.+|+|||+||.+..
T Consensus 436 ~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~-t~~W~~~--~~~p~~R~~h~~~~~~~~~iyv~GG~~~~ 512 (695)
T 2zwa_A 436 VPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMK-TREWSMI--KSLSHTRFRHSACSLPDGNVLILGGVTEG 512 (695)
T ss_dssp CCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETT-TTEEEEC--CCCSBCCBSCEEEECTTSCEEEECCBCSS
T ss_pred CCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCC-CCcEEEC--CCCCCCcccceEEEEcCCEEEEECCCCCC
Confidence 3444444455555 9999999997532 4789999999 9999999 68999999999998779999999998653
Q ss_pred -eEEEE-cCCCCCCCcceeecCC---ccccCCCCCCCCCCcceEEEecC---CcEEEEEcc---------ceEEEeccCC
Q 043369 178 -TYEFI-PRTSDSDRKILYQLPF---LKETMHSPKIPNNLYPFLHLSTD---GNLFIFAND---------RAILLDYVNN 240 (526)
Q Consensus 178 -~~E~y-P~~~~~~~~~w~~~p~---l~~~~~~~~~~~~~yp~~~~~~d---G~Iy~~Gg~---------~~~~yDp~t~ 240 (526)
.+|+| |.++ +|..++. +.. ..+-+..++.+ |+||++||. +.++||+.++
T Consensus 513 ~~v~~yd~~t~-----~W~~~~~~g~~p~---------~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~ 578 (695)
T 2zwa_A 513 PAMLLYNVTEE-----IFKDVTPKDEFFQ---------NSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAE 578 (695)
T ss_dssp CSEEEEETTTT-----EEEECCCSSGGGG---------SCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTT
T ss_pred CCEEEEECCCC-----ceEEccCCCCCCC---------cccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCC
Confidence 68999 8887 7876643 211 11223333334 899999985 3689999999
Q ss_pred e------EEEeccCCCCCCCCccCCCCceeecccccccccccccCCCCCccC-cEEEEEcCCCCCCCchhhhhhcccccc
Q 043369 241 R------VMKNYPVMPGGISRNYPSTGSSVLLPVNLSSINVHINNNNKPVVH-SQVLICGGTLPDSNENAAEAQIFLPAA 313 (526)
Q Consensus 241 ~------w~~~~p~~p~~~~r~y~~~g~~v~lp~~~~~~~~~~~~~~~~~~~-gkI~v~GG~~~~~~~~~~~~~~~~~a~ 313 (526)
+ |. .++.+|. .+|.. .+++. .+ ++||++||...... ....
T Consensus 579 ~w~~~~~W~-~~~~~p~-~~R~~---~~~~~-------------------~~~~~iyv~GG~~~~~~---------~~~~ 625 (695)
T 2zwa_A 579 NATEPITVI-KKLQHPL-FQRYG---SQIKY-------------------ITPRKLLIVGGTSPSGL---------FDRT 625 (695)
T ss_dssp CSSCCEEEE-EEEECGG-GCCBS---CEEEE-------------------EETTEEEEECCBCSSCC---------CCTT
T ss_pred ccccceEEE-EcCCCCC-CCccc---ceEEE-------------------eCCCEEEEECCccCCCC---------CCCC
Confidence 9 66 4655432 24653 23332 35 99999999752110 1246
Q ss_pred cceEEEEeecCCCCceecccCc--------cccccceEEeCCCcEEEEcCcC
Q 043369 314 KSCGRLTITAQNPKWEMEEMPL--------NRVMGDMILLPTGDVLIINGAA 357 (526)
Q Consensus 314 ~s~~~~d~~~~~~~W~~~~M~~--------~R~~~~~vvLpdG~V~vvGG~~ 357 (526)
+.+++||+. +++|+..+++. .|..|+++++.+|+|||+||..
T Consensus 626 ~~v~~yd~~--t~~W~~~~~p~~~~~~~~p~~~gh~~~~~~~g~i~v~GGg~ 675 (695)
T 2zwa_A 626 NSIISLDPL--SETLTSIPISRRIWEDHSLMLAGFSLVSTSMGTIHIIGGGA 675 (695)
T ss_dssp TSEEEEETT--TTEEEECCCCHHHHHHSCCCCSSCEEECC---CEEEECCEE
T ss_pred CeEEEEECC--CCeEEEeeccccccCCCCccceeeeEEEeCCCEEEEEeCCc
Confidence 789999986 58999645443 2455777777777999999964
No 19
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.23 E-value=0.00093 Score=66.07 Aligned_cols=248 Identities=12% Similarity=0.073 Sum_probs=121.7
Q ss_pred eEEEEeCCCCcEEeCccCCccccccceEcCCCc-EEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcc--------cc
Q 043369 86 HAVEFDPITRKVRPLTIQTDTWCSSGALLANGV-LVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISP--------RW 156 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~-l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~--------R~ 156 (526)
...+||+.+++....-.... ...+.+..+||+ +|+.+.. ...+.+||+. +.+-... -++... ..
T Consensus 70 ~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~v~~~~---~~~v~~~d~~-~~~~~~~--~~~~~~~~~~~~~~~~ 142 (353)
T 3vgz_A 70 VVYRLDPVTLEVTQAIHNDL-KPFGATINNTTQTLWFGNTV---NSAVTAIDAK-TGEVKGR--LVLDDRKRTEEVRPLQ 142 (353)
T ss_dssp EEEEECTTTCCEEEEEEESS-CCCSEEEETTTTEEEEEETT---TTEEEEEETT-TCCEEEE--EESCCCCCCSSCCCCE
T ss_pred cEEEEcCCCCeEEEEEecCC-CcceEEECCCCCEEEEEecC---CCEEEEEeCC-CCeeEEE--EecCCCccccccCCCC
Confidence 57889999887543321111 123345667887 6666543 2478999997 5543221 011111 11
Q ss_pred cceeEEecCCc-EEEEcCccCCeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcce-EEEecCCcEEEEEcc--c
Q 043369 157 YASNQILPNGK-IIVVGGRFQFTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPF-LHLSTDGNLFIFAND--R 231 (526)
Q Consensus 157 y~s~~~L~dG~-v~viGG~~~~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~-~~~~~dG~Iy~~Gg~--~ 231 (526)
-.+.+.-+||+ +|+.+......+.+| +.+.. .-..++.... .|. ....+||+.++++.. .
T Consensus 143 ~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~----~~~~~~~~~~-----------~~~~~~~s~dg~~l~~~~~~~~ 207 (353)
T 3vgz_A 143 PRELVADDATNTVYISGIGKESVIWVVDGGNIK----LKTAIQNTGK-----------MSTGLALDSEGKRLYTTNADGE 207 (353)
T ss_dssp EEEEEEETTTTEEEEEEESSSCEEEEEETTTTE----EEEEECCCCT-----------TCCCCEEETTTTEEEEECTTSE
T ss_pred CceEEECCCCCEEEEEecCCCceEEEEcCCCCc----eEEEecCCCC-----------ccceEEECCCCCEEEEEcCCCe
Confidence 12345556776 555542333456667 55431 1112221100 111 245678875555543 4
Q ss_pred eEEEeccCCeEEEeccCCCCCCCCccCCCCceeecccccccccccccCCCCCccCcEEEEEcCCCCCCCchhhhhhcccc
Q 043369 232 AILLDYVNNRVMKNYPVMPGGISRNYPSTGSSVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLP 311 (526)
Q Consensus 232 ~~~yDp~t~~w~~~~p~~p~~~~r~y~~~g~~v~lp~~~~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~ 311 (526)
..+||..+++....++.-..+ ++.++ .+ ...-| ....+|+.....
T Consensus 208 i~~~d~~~~~~~~~~~~~~~~-~~~~~-~~-~~~s~-----------------dg~~l~~~~~~~--------------- 252 (353)
T 3vgz_A 208 LITIDTADNKILSRKKLLDDG-KEHFF-IN-ISLDT-----------------ARQRAFITDSKA--------------- 252 (353)
T ss_dssp EEEEETTTTEEEEEEECCCSS-SCCCE-EE-EEEET-----------------TTTEEEEEESSS---------------
T ss_pred EEEEECCCCeEEEEEEcCCCC-CCccc-ce-EEECC-----------------CCCEEEEEeCCC---------------
Confidence 678999988755333221111 11111 01 11111 244566654321
Q ss_pred cccceEEEEeecCCCCceec-ccCccccccceEEeCCCc-EEEEcCcCCCCCCccCCCCCccccEEEeCCCCcEeecCCC
Q 043369 312 AAKSCGRLTITAQNPKWEME-EMPLNRVMGDMILLPTGD-VLIINGAAKGTAGWGAAREPVLNPVIYCPKINRFRILSPS 389 (526)
Q Consensus 312 a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvLpdG~-V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~Wt~~a~~ 389 (526)
..+.+||+.. .+.... +.+.++ ....-|||+ +|+.+..+ + .+.+||+.+.+....-+
T Consensus 253 --~~v~~~d~~~--~~~~~~~~~~~~~---~~~~s~dg~~l~v~~~~~-~------------~v~~~d~~~~~~~~~~~- 311 (353)
T 3vgz_A 253 --AEVLVVDTRN--GNILAKVAAPESL---AVLFNPARNEAYVTHRQA-G------------KVSVIDAKSYKVVKTFD- 311 (353)
T ss_dssp --SEEEEEETTT--CCEEEEEECSSCC---CEEEETTTTEEEEEETTT-T------------EEEEEETTTTEEEEEEE-
T ss_pred --CEEEEEECCC--CcEEEEEEcCCCc---eEEECCCCCEEEEEECCC-C------------eEEEEECCCCeEEEEEe-
Confidence 2456788642 332222 333332 345568998 67665432 1 57899998875443211
Q ss_pred CccccccccceecCCCE-EEEecCC
Q 043369 390 LIPRLYHSTAHLLSDGR-VLVGGSN 413 (526)
Q Consensus 390 ~~~R~yhs~a~LlpdG~-V~v~GG~ 413 (526)
....-++ ..+.|||+ +|++...
T Consensus 312 -~~~~~~~-~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 312 -TPTHPNS-LALSADGKTLYVSVKQ 334 (353)
T ss_dssp -CCSEEEE-EEECTTSCEEEEEEEC
T ss_pred -cCCCCCe-EEEcCCCCEEEEEEcc
Confidence 1222233 34568997 7777654
No 20
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.90 E-value=0.006 Score=59.48 Aligned_cols=247 Identities=9% Similarity=0.058 Sum_probs=126.8
Q ss_pred EEEEeCCCCcEEeCccCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccc-cceeEEecC
Q 043369 87 AVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRW-YASNQILPN 165 (526)
Q Consensus 87 ~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~-y~s~~~L~d 165 (526)
..+||..+++....-..+..........++|+++++|+.. ..+.+||.. +.+-... +..... -.++..-++
T Consensus 47 i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d---~~i~vwd~~-~~~~~~~----~~~~~~~v~~~~~~~~ 118 (312)
T 4ery_A 47 IKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDD---KTLKIWDVS-SGKCLKT----LKGHSNYVFCCNFNPQ 118 (312)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT---SEEEEEETT-TCCEEEE----EECCSSCEEEEEECSS
T ss_pred EEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCC---CEEEEEECC-CCcEEEE----EcCCCCCEEEEEEcCC
Confidence 5678888877655433333323334566799999999863 578999987 5432211 211111 123344568
Q ss_pred CcEEEEcCccCCeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEccc--eEEEeccCCeE
Q 043369 166 GKIIVVGGRFQFTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDR--AILLDYVNNRV 242 (526)
Q Consensus 166 G~v~viGG~~~~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~~--~~~yDp~t~~w 242 (526)
++.++.|+.++ .+.+| ..+.. .-..++.- . .... .+...++|++++.|+.+ ..+||..+++.
T Consensus 119 ~~~l~s~~~d~-~i~iwd~~~~~----~~~~~~~~--~-------~~v~-~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~ 183 (312)
T 4ery_A 119 SNLIVSGSFDE-SVRIWDVKTGK----CLKTLPAH--S-------DPVS-AVHFNRDGSLIVSSSYDGLCRIWDTASGQC 183 (312)
T ss_dssp SSEEEEEETTS-CEEEEETTTCC----EEEEECCC--S-------SCEE-EEEECTTSSEEEEEETTSCEEEEETTTCCE
T ss_pred CCEEEEEeCCC-cEEEEECCCCE----EEEEecCC--C-------CcEE-EEEEcCCCCEEEEEeCCCcEEEEECCCCce
Confidence 89999888765 46677 44331 11112110 0 0011 12345689999888754 67899988765
Q ss_pred EEeccCCCCCCCCccCCCCceeecccccccccccccCCCCCccCcEEEEEcCCCCCCCchhhhhhcccccccceEEEEee
Q 043369 243 MKNYPVMPGGISRNYPSTGSSVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTIT 322 (526)
Q Consensus 243 ~~~~p~~p~~~~r~y~~~g~~v~lp~~~~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~ 322 (526)
...+. .. .. .....+... .+++.+++|+.+. .+..||+.
T Consensus 184 ~~~~~--~~---~~----~~~~~~~~~---------------~~~~~l~~~~~d~-----------------~i~iwd~~ 222 (312)
T 4ery_A 184 LKTLI--DD---DN----PPVSFVKFS---------------PNGKYILAATLDN-----------------TLKLWDYS 222 (312)
T ss_dssp EEEEC--CS---SC----CCEEEEEEC---------------TTSSEEEEEETTT-----------------EEEEEETT
T ss_pred eeEEe--cc---CC----CceEEEEEC---------------CCCCEEEEEcCCC-----------------eEEEEECC
Confidence 43221 11 00 111111111 2667777777541 34556654
Q ss_pred cCCCCceecc-cCccccccceEEeCCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCcEe-ecCCCCccccccccce
Q 043369 323 AQNPKWEMEE-MPLNRVMGDMILLPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINRFR-ILSPSLIPRLYHSTAH 400 (526)
Q Consensus 323 ~~~~~W~~~~-M~~~R~~~~~vvLpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~Wt-~~a~~~~~R~yhs~a~ 400 (526)
.......... .............++++.++.|+.+ | .+.+||..+.+-. .+... .... ....
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d-g------------~i~vwd~~~~~~~~~~~~h-~~~v--~~~~ 286 (312)
T 4ery_A 223 KGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED-N------------LVYIWNLQTKEIVQKLQGH-TDVV--ISTA 286 (312)
T ss_dssp TTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTT-S------------CEEEEETTTCCEEEEECCC-SSCE--EEEE
T ss_pred CCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCC-C------------EEEEEECCCchhhhhhhcc-CCcE--EEEe
Confidence 2110011111 1111111122334688988888865 2 5689998877432 11110 0011 1233
Q ss_pred ecCCCEEEEecCC
Q 043369 401 LLSDGRVLVGGSN 413 (526)
Q Consensus 401 LlpdG~V~v~GG~ 413 (526)
.-|+++.++.++.
T Consensus 287 ~~p~~~~l~s~~~ 299 (312)
T 4ery_A 287 CHPTENIIASAAL 299 (312)
T ss_dssp ECSSSSEEEEEEC
T ss_pred ecCcCCceEEEEc
Confidence 4588998888763
No 21
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.84 E-value=0.0085 Score=59.72 Aligned_cols=269 Identities=14% Similarity=0.115 Sum_probs=140.2
Q ss_pred ceEEEEeCCCCcEEeCcc------CCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCccc-ccCCCCCccccc
Q 043369 85 AHAVEFDPITRKVRPLTI------QTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEE-DHQNGLISPRWY 157 (526)
Q Consensus 85 ~~~~~yDp~t~~w~~~~~------~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~-~~~~~m~~~R~y 157 (526)
.....||++|+++...-. ....+.. +..+.++++|++... ...+.++|+. +.+-.. . .....++
T Consensus 17 ~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~-~i~~~~~~lyv~~~~---~~~v~viD~~-t~~~~~~i--~~~~~p~-- 87 (328)
T 3dsm_A 17 ATLSYYDPATCEVENEVFYRANGFKLGDVAQ-SMVIRDGIGWIVVNN---SHVIFAIDIN-TFKEVGRI--TGFTSPR-- 87 (328)
T ss_dssp BEEEEEETTTTEEECSHHHHHHSSCCBSCEE-EEEEETTEEEEEEGG---GTEEEEEETT-TCCEEEEE--ECCSSEE--
T ss_pred ceEEEEECCCCEEhhhhHhhhcCcccCccce-EEEEECCEEEEEEcC---CCEEEEEECc-ccEEEEEc--CCCCCCc--
Confidence 357889999999875321 0001122 234467888888642 3689999998 665432 2 1233333
Q ss_pred ceeEEecCCcEEEEcCccCCeEEEE-cCCCCCCCccee-ecCCccccCCCCCCCCCCcceEEEecCCcEEEEE---ccce
Q 043369 158 ASNQILPNGKIIVVGGRFQFTYEFI-PRTSDSDRKILY-QLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFA---NDRA 232 (526)
Q Consensus 158 ~s~~~L~dG~v~viGG~~~~~~E~y-P~~~~~~~~~w~-~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~G---g~~~ 232 (526)
.++.-+||++||.... ...+.++ +.+. +.. .++.-... .....|...+..+++||+.. +...
T Consensus 88 -~i~~~~~g~lyv~~~~-~~~v~~iD~~t~-----~~~~~i~~g~~~------~~~~~p~~i~~~~~~lyv~~~~~~~~v 154 (328)
T 3dsm_A 88 -YIHFLSDEKAYVTQIW-DYRIFIINPKTY-----EITGYIECPDMD------MESGSTEQMVQYGKYVYVNCWSYQNRI 154 (328)
T ss_dssp -EEEEEETTEEEEEEBS-CSEEEEEETTTT-----EEEEEEECTTCC------TTTCBCCCEEEETTEEEEEECTTCCEE
T ss_pred -EEEEeCCCeEEEEECC-CCeEEEEECCCC-----eEEEEEEcCCcc------ccCCCcceEEEECCEEEEEcCCCCCEE
Confidence 2333378999998743 2356666 6654 211 12211100 00113444444788999885 3457
Q ss_pred EEEeccCCeEEEeccCCCCCCCCccCCCCceeecccccccccccccCCCCCccCcEEEEEcCCCCCCCchhhhhhccccc
Q 043369 233 ILLDYVNNRVMKNYPVMPGGISRNYPSTGSSVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPA 312 (526)
Q Consensus 233 ~~yDp~t~~w~~~~p~~p~~~~r~y~~~g~~v~lp~~~~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a 312 (526)
.++|+.+++..+.++. + ..| .+.+. . .+|++|+..-...... .+ ...
T Consensus 155 ~viD~~t~~~~~~i~~---g---~~p-~~i~~----~---------------~dG~l~v~~~~~~~~~------~~-~~~ 201 (328)
T 3dsm_A 155 LKIDTETDKVVDELTI---G---IQP-TSLVM----D---------------KYNKMWTITDGGYEGS------PY-GYE 201 (328)
T ss_dssp EEEETTTTEEEEEEEC---S---SCB-CCCEE----C---------------TTSEEEEEBCCBCTTC------SS-CBC
T ss_pred EEEECCCCeEEEEEEc---C---CCc-cceEE----c---------------CCCCEEEEECCCccCC------cc-ccC
Confidence 8999999987654432 1 112 12221 1 2789888764320000 00 011
Q ss_pred ccceEEEEeecCCCCceec-ccCccccccceEEeCCC-cEEEEcCcCCCCCCccCCCCCccccEEEeCCCCcEeecCCCC
Q 043369 313 AKSCGRLTITAQNPKWEME-EMPLNRVMGDMILLPTG-DVLIINGAAKGTAGWGAAREPVLNPVIYCPKINRFRILSPSL 390 (526)
Q Consensus 313 ~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvLpdG-~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~Wt~~a~~~ 390 (526)
...+.+||+. +.+.... .++....-...++-||| ++|+.++ .+.+||+++.+.....-.+
T Consensus 202 ~~~v~~id~~--t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~----------------~v~~~d~~t~~~~~~~~~~ 263 (328)
T 3dsm_A 202 APSLYRIDAE--TFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN----------------DIWRMPVEADRVPVRPFLE 263 (328)
T ss_dssp CCEEEEEETT--TTEEEEEEECCTTCCCEEEEECTTSCEEEEESS----------------SEEEEETTCSSCCSSCSBC
T ss_pred CceEEEEECC--CCeEEEEEecCCCCCceeEEEecCCCEEEEEcc----------------EEEEEECCCCceeeeeeec
Confidence 3567788864 2443322 44332222233455655 5666543 3568999888653211111
Q ss_pred c-cccccccceecC-CCEEEEecCCCCCCCCcCCCCCCceeeEEEcCc
Q 043369 391 I-PRLYHSTAHLLS-DGRVLVGGSNPNVNYNFSALFPTELSLQAFYPP 436 (526)
Q Consensus 391 ~-~R~yhs~a~Llp-dG~V~v~GG~~~~~~~~~~~~p~~~~vE~y~Pp 436 (526)
. ...-.+. .+-| +|+|||+.... | -..-+|.+|+|.
T Consensus 264 ~~~~~p~gi-~vdp~~g~lyva~~~~---y------~~~~~V~v~d~~ 301 (328)
T 3dsm_A 264 FRDTKYYGL-TVNPNNGEVYVADAID---Y------QQQGIVYRYSPQ 301 (328)
T ss_dssp CCSSCEEEE-EECTTTCCEEEEECTT---S------SSEEEEEEECTT
T ss_pred CCCCceEEE-EEcCCCCeEEEEcccc---c------ccCCEEEEECCC
Confidence 1 1222333 3456 89999997321 1 113468888876
No 22
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.74 E-value=0.0027 Score=62.11 Aligned_cols=215 Identities=12% Similarity=0.022 Sum_probs=120.2
Q ss_pred CCcEEEEcCCCCCccEEEEEcCCCCC--CcccccCCCCCcccccceeEEecCCcEEEEcCccCCeEEEE-cCCCCCCCcc
Q 043369 116 NGVLVQTGGYRLGERVVRYLKPCSDC--DWEEDHQNGLISPRWYASNQILPNGKIIVVGGRFQFTYEFI-PRTSDSDRKI 192 (526)
Q Consensus 116 ~G~l~v~GG~~~g~~~v~~ydp~~t~--~W~~~~~~~m~~~R~y~s~~~L~dG~v~viGG~~~~~~E~y-P~~~~~~~~~ 192 (526)
.|+++++|... ..+.++|+. +. .|+.. . ......+.+..++||++|+.+ ...+..| | ++. ..
T Consensus 4 ~~~~lv~~~~~---~~v~~~d~~-tG~~~w~~~--~--~~~~~~~~~~~~pdG~ilvs~---~~~V~~~d~-~G~---~~ 68 (276)
T 3no2_A 4 PQHLLVGGSGW---NKIAIINKD-TKEIVWEYP--L--EKGWECNSVAATKAGEILFSY---SKGAKMITR-DGR---EL 68 (276)
T ss_dssp CCEEEEECTTC---SEEEEEETT-TTEEEEEEE--C--CTTCCCCEEEECTTSCEEEEC---BSEEEEECT-TSC---EE
T ss_pred CCcEEEeeCCC---CEEEEEECC-CCeEEEEeC--C--CccCCCcCeEECCCCCEEEeC---CCCEEEECC-CCC---EE
Confidence 46788887643 678899996 43 47543 1 111234567788999999943 2346666 6 442 24
Q ss_pred eeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEcc---ceEEEeccCCeEEEeccCCCCCC--CCccCCCCceeecc
Q 043369 193 LYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFAND---RAILLDYVNNRVMKNYPVMPGGI--SRNYPSTGSSVLLP 267 (526)
Q Consensus 193 w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~---~~~~yDp~t~~w~~~~p~~p~~~--~r~y~~~g~~v~lp 267 (526)
|..-.. ... ..+ .+..++||++++.... ....+|+.... ...++. .... +...+ .+.+. +
T Consensus 69 W~~~~~--~~~-------~~~-~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~-l~~~~~-~~~~~~~~~~~-~~v~~-~- 133 (276)
T 3no2_A 69 WNIAAP--AGC-------EMQ-TARILPDGNALVAWCGHPSTILEVNMKGEV-LSKTEF-ETGIERPHAQF-RQINK-N- 133 (276)
T ss_dssp EEEECC--TTC-------EEE-EEEECTTSCEEEEEESTTEEEEEECTTSCE-EEEEEE-CCSCSSGGGSC-SCCEE-C-
T ss_pred EEEcCC--CCc-------ccc-ccEECCCCCEEEEecCCCCEEEEEeCCCCE-EEEEec-cCCCCcccccc-cCceE-C-
Confidence 542210 000 011 1345779999987643 45667885443 212321 1110 11111 12222 1
Q ss_pred cccccccccccCCCCCccCcEEEEEcCCCCCCCchhhhhhcccccccceEEEEeecCCCCceecccCccccccceEEeCC
Q 043369 268 VNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTITAQNPKWEMEEMPLNRVMGDMILLPT 347 (526)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M~~~R~~~~~vvLpd 347 (526)
.+|.++++...+ ..+.+||+. .+-.|+...-..+ +++..+++
T Consensus 134 -----------------~~G~~lv~~~~~-----------------~~v~~~d~~-G~~~w~~~~~~~~---~~~~~~~~ 175 (276)
T 3no2_A 134 -----------------KKGNYLVPLFAT-----------------SEVREIAPN-GQLLNSVKLSGTP---FSSAFLDN 175 (276)
T ss_dssp -----------------TTSCEEEEETTT-----------------TEEEEECTT-SCEEEEEECSSCC---CEEEECTT
T ss_pred -----------------CCCCEEEEecCC-----------------CEEEEECCC-CCEEEEEECCCCc---cceeEcCC
Confidence 367777765432 246678875 4566876421112 24567899
Q ss_pred CcEEEEcCcCCCCCCccCCCCCccccEEEeCCCC--cEeecCC-CCcccc-ccccceecCCCEEEEec
Q 043369 348 GDVLIINGAAKGTAGWGAAREPVLNPVIYCPKIN--RFRILSP-SLIPRL-YHSTAHLLSDGRVLVGG 411 (526)
Q Consensus 348 G~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~--~Wt~~a~-~~~~R~-yhs~a~LlpdG~V~v~G 411 (526)
|.++|++... ..+..+||++. .|+.-.. ..-.|+ +.+.+.+++||.+||+.
T Consensus 176 g~~~v~~~~~-------------~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 176 GDCLVACGDA-------------HCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp SCEEEECBTT-------------SEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred CCEEEEeCCC-------------CeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEe
Confidence 9999987643 14789999977 5765322 121233 33456678999999997
No 23
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.69 E-value=0.0099 Score=57.99 Aligned_cols=238 Identities=11% Similarity=0.119 Sum_probs=124.2
Q ss_pred eEEEEeCCCCc--EEeCccCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEe
Q 043369 86 HAVEFDPITRK--VRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQIL 163 (526)
Q Consensus 86 ~~~~yDp~t~~--w~~~~~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L 163 (526)
...+||++|++ |+--. .....+....+++||++|+.+ .+.+..|||.....|.-. . .......++..+
T Consensus 16 ~v~~~d~~tG~~~w~~~~-~~~~~~~~~~~~pdG~ilvs~-----~~~V~~~d~~G~~~W~~~--~--~~~~~~~~~~~~ 85 (276)
T 3no2_A 16 KIAIINKDTKEIVWEYPL-EKGWECNSVAATKAGEILFSY-----SKGAKMITRDGRELWNIA--A--PAGCEMQTARIL 85 (276)
T ss_dssp EEEEEETTTTEEEEEEEC-CTTCCCCEEEECTTSCEEEEC-----BSEEEEECTTSCEEEEEE--C--CTTCEEEEEEEC
T ss_pred EEEEEECCCCeEEEEeCC-CccCCCcCeEECCCCCEEEeC-----CCCEEEECCCCCEEEEEc--C--CCCccccccEEC
Confidence 46678888877 33221 111234455678999999943 256999999523457643 2 111123467788
Q ss_pred cCCcEEEEcCccCCeEEEE-cCCCCCCCccee-ecC-CccccCCCCCCCCCCcceEEEecCCcEEEEEc--cceEEEecc
Q 043369 164 PNGKIIVVGGRFQFTYEFI-PRTSDSDRKILY-QLP-FLKETMHSPKIPNNLYPFLHLSTDGNLFIFAN--DRAILLDYV 238 (526)
Q Consensus 164 ~dG~v~viGG~~~~~~E~y-P~~~~~~~~~w~-~~p-~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg--~~~~~yDp~ 238 (526)
+||++++....+...+-.+ |..+ ..|. .+. ..... ......+...+||++++... ..+.+||++
T Consensus 86 ~dG~~lv~~~~~~~~v~~vd~~Gk----~l~~~~~~~~~~~~-------~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~ 154 (276)
T 3no2_A 86 PDGNALVAWCGHPSTILEVNMKGE----VLSKTEFETGIERP-------HAQFRQINKNKKGNYLVPLFATSEVREIAPN 154 (276)
T ss_dssp TTSCEEEEEESTTEEEEEECTTSC----EEEEEEECCSCSSG-------GGSCSCCEECTTSCEEEEETTTTEEEEECTT
T ss_pred CCCCEEEEecCCCCEEEEEeCCCC----EEEEEeccCCCCcc-------cccccCceECCCCCEEEEecCCCEEEEECCC
Confidence 9999998865422233334 4322 1333 121 10000 00111234577999888764 347889998
Q ss_pred CCeEEEeccCCCCCCCCccCCCCceeecccccccccccccCCCCCccCcEEEEEcCCCCCCCchhhhhhcccccccceEE
Q 043369 239 NNRVMKNYPVMPGGISRNYPSTGSSVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGR 318 (526)
Q Consensus 239 t~~w~~~~p~~p~~~~r~y~~~g~~v~lp~~~~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~ 318 (526)
++....+. .+. .| .++ ..+ .++.+++++... ..+..
T Consensus 155 -G~~~w~~~-~~~-----~~-~~~-~~~------------------~~g~~~v~~~~~-----------------~~v~~ 190 (276)
T 3no2_A 155 -GQLLNSVK-LSG-----TP-FSS-AFL------------------DNGDCLVACGDA-----------------HCFVQ 190 (276)
T ss_dssp -SCEEEEEE-CSS-----CC-CEE-EEC------------------TTSCEEEECBTT-----------------SEEEE
T ss_pred -CCEEEEEE-CCC-----Cc-cce-eEc------------------CCCCEEEEeCCC-----------------CeEEE
Confidence 44221232 121 11 122 222 278888877543 13556
Q ss_pred EEeecCCCCceec--ccCcccc--ccceEEeCCCcEEEEc--CcCCCCCCccCCCCCccccEEEeCCCC-cEeecCCCCc
Q 043369 319 LTITAQNPKWEME--EMPLNRV--MGDMILLPTGDVLIIN--GAAKGTAGWGAAREPVLNPVIYCPKIN-RFRILSPSLI 391 (526)
Q Consensus 319 ~d~~~~~~~W~~~--~M~~~R~--~~~~vvLpdG~V~vvG--G~~~g~~g~~~~~~~~~~~e~YDP~t~-~Wt~~a~~~~ 391 (526)
+|+.+..-.|+.. ..+..|. .....+++||.|||.. |...+. + ..+.. .+-..||+-+ .|+--.....
T Consensus 191 ~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~--~--~~~~~-~~~~~~~~g~~~W~~~~~~~~ 265 (276)
T 3no2_A 191 LNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREA--G--KGKHP-QLVEIDSEGKVVWQLNDKVKF 265 (276)
T ss_dssp ECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTTCTTG--G--GSCCC-SEEEECTTSBEEEEECCTTTS
T ss_pred EeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEeccCccccc--c--ccCCc-eEEEECCCCCEEEEecCcccc
Confidence 8875445568864 3332232 2344678999999997 432100 0 00011 2333577555 6776554444
Q ss_pred cc
Q 043369 392 PR 393 (526)
Q Consensus 392 ~R 393 (526)
.+
T Consensus 266 ~~ 267 (276)
T 3no2_A 266 GM 267 (276)
T ss_dssp CC
T ss_pred cc
Confidence 43
No 24
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.68 E-value=0.005 Score=61.08 Aligned_cols=152 Identities=11% Similarity=0.041 Sum_probs=84.6
Q ss_pred EEecCCeEEEEecccCCCCCccCCCCccccCccccCCCCcceEEEEeCCCCcEEeCccC--CccccccceEcCCCcEEEE
Q 043369 45 ALLPNDRIIAFDRSHFGPSNITLPQGKCIKGVELETSDCYAHAVEFDPITRKVRPLTIQ--TDTWCSSGALLANGVLVQT 122 (526)
Q Consensus 45 a~l~~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~yDp~t~~w~~~~~~--~~~fc~~~~~l~~G~l~v~ 122 (526)
+.-++|+.++.++.+ | ...+||..++++..+... +..........++|+.+++
T Consensus 15 ~~s~~~~~l~~~~~d----------~---------------~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~ 69 (372)
T 1k8k_C 15 AWNKDRTQIAICPNN----------H---------------EVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVT 69 (372)
T ss_dssp EECTTSSEEEEECSS----------S---------------EEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEE
T ss_pred EECCCCCEEEEEeCC----------C---------------EEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEE
Confidence 345788888887543 2 467899888876554432 2222223445678999999
Q ss_pred cCCCCCccEEEEEcCCCCCCcccccCCCC-CcccccceeEEecCCcEEEEcCccCCeEEEE-cCCCCCCCcceeecCCcc
Q 043369 123 GGYRLGERVVRYLKPCSDCDWEEDHQNGL-ISPRWYASNQILPNGKIIVVGGRFQFTYEFI-PRTSDSDRKILYQLPFLK 200 (526)
Q Consensus 123 GG~~~g~~~v~~ydp~~t~~W~~~~~~~m-~~~R~y~s~~~L~dG~v~viGG~~~~~~E~y-P~~~~~~~~~w~~~p~l~ 200 (526)
|+.. ..+.+||.. +.++... ..+ .....-.+++..++|+.+++|+.++ .+.+| .... ..+.....+.
T Consensus 70 ~~~d---g~i~vwd~~-~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-~v~i~d~~~~----~~~~~~~~~~ 138 (372)
T 1k8k_C 70 CGTD---RNAYVWTLK-GRTWKPT--LVILRINRAARCVRWAPNEKKFAVGSGSR-VISICYFEQE----NDWWVCKHIK 138 (372)
T ss_dssp EETT---SCEEEEEEE-TTEEEEE--EECCCCSSCEEEEEECTTSSEEEEEETTS-SEEEEEEETT----TTEEEEEEEC
T ss_pred EcCC---CeEEEEECC-CCeeeee--EEeecCCCceeEEEECCCCCEEEEEeCCC-EEEEEEecCC----Ccceeeeeee
Confidence 8863 468888877 6655433 111 1222223445556899999988764 35555 3332 1222111110
Q ss_pred ccCCCCCCCCCCcceEEEecCCcEEEEEccc--eEEEecc
Q 043369 201 ETMHSPKIPNNLYPFLHLSTDGNLFIFANDR--AILLDYV 238 (526)
Q Consensus 201 ~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~~--~~~yDp~ 238 (526)
.... ... -.+...++|+.++.|+.+ ..+||..
T Consensus 139 ~~~~-----~~i-~~~~~~~~~~~l~~~~~dg~i~~~d~~ 172 (372)
T 1k8k_C 139 KPIR-----STV-LSLDWHPNSVLLAAGSCDFKCRIFSAY 172 (372)
T ss_dssp TTCC-----SCE-EEEEECTTSSEEEEEETTSCEEEEECC
T ss_pred cccC-----CCe-eEEEEcCCCCEEEEEcCCCCEEEEEcc
Confidence 0000 011 122345689988888754 5678853
No 25
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.66 E-value=0.0071 Score=60.22 Aligned_cols=246 Identities=16% Similarity=0.139 Sum_probs=123.7
Q ss_pred eEEEEeCCCCcEEeCccCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCC--cccccCCCCCccccc-ceeEE
Q 043369 86 HAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCD--WEEDHQNGLISPRWY-ASNQI 162 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~--W~~~~~~~m~~~R~y-~s~~~ 162 (526)
...+||..+.+-...-..+..........++|+.+++||.. ..+.+||.. +.. .... ..+...... .++..
T Consensus 78 ~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d---~~v~iw~~~-~~~~~~~~~--~~~~~h~~~v~~~~~ 151 (340)
T 1got_B 78 KLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLD---NICSIYNLK-TREGNVRVS--RELAGHTGYLSCCRF 151 (340)
T ss_dssp EEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETT---CEEEEEETT-TCSBSCEEE--EEEECCSSCEEEEEE
T ss_pred cEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCC---CeEEEEECc-cCCCcceeE--EEecCCCccEEEEEE
Confidence 46789987766433222233222334566799999999874 578899976 432 1111 011111111 22333
Q ss_pred ecCCcEEEEcCccCCeEEEE-cCCCCCCCccee-ecCCccccCCCCCCCCCCcceEEEecCCcEEEEEcc--ceEEEecc
Q 043369 163 LPNGKIIVVGGRFQFTYEFI-PRTSDSDRKILY-QLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFAND--RAILLDYV 238 (526)
Q Consensus 163 L~dG~v~viGG~~~~~~E~y-P~~~~~~~~~w~-~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~--~~~~yDp~ 238 (526)
.++++ ++.|+.+ .++.+| ..+. ... .+.. .. .... .+...++|++++.|+. ...+||..
T Consensus 152 ~~~~~-l~s~s~d-~~i~~wd~~~~-----~~~~~~~~--h~-------~~v~-~~~~~~~~~~l~sg~~d~~v~~wd~~ 214 (340)
T 1got_B 152 LDDNQ-IVTSSGD-TTCALWDIETG-----QQTTTFTG--HT-------GDVM-SLSLAPDTRLFVSGACDASAKLWDVR 214 (340)
T ss_dssp EETTE-EEEEETT-SCEEEEETTTT-----EEEEEECC--CS-------SCEE-EEEECTTSSEEEEEETTSCEEEEETT
T ss_pred CCCCc-EEEEECC-CcEEEEECCCC-----cEEEEEcC--CC-------CceE-EEEECCCCCEEEEEeCCCcEEEEECC
Confidence 44666 4555544 356777 4443 211 1110 00 0111 2344578999999875 46789988
Q ss_pred CCeEEEeccCCCCCCCCccCCCCceeecccccccccccccCCCCCccCcEEEEEcCCCCCCCchhhhhhcccccccceEE
Q 043369 239 NNRVMKNYPVMPGGISRNYPSTGSSVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGR 318 (526)
Q Consensus 239 t~~w~~~~p~~p~~~~r~y~~~g~~v~lp~~~~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~ 318 (526)
+++-...+ ... .+...-+... .+++.++.|+.+. ++..
T Consensus 215 ~~~~~~~~---~~h-------~~~v~~v~~~---------------p~~~~l~s~s~d~-----------------~v~i 252 (340)
T 1got_B 215 EGMCRQTF---TGH-------ESDINAICFF---------------PNGNAFATGSDDA-----------------TCRL 252 (340)
T ss_dssp TCSEEEEE---CCC-------SSCEEEEEEC---------------TTSSEEEEEETTS-----------------CEEE
T ss_pred CCeeEEEE---cCC-------cCCEEEEEEc---------------CCCCEEEEEcCCC-----------------cEEE
Confidence 77644322 111 0111111111 2677888887652 3456
Q ss_pred EEeecCCCCceec-ccCccc-cccceEEeCCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCcE-eecCCCCccccc
Q 043369 319 LTITAQNPKWEME-EMPLNR-VMGDMILLPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINRF-RILSPSLIPRLY 395 (526)
Q Consensus 319 ~d~~~~~~~W~~~-~M~~~R-~~~~~vvLpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~W-t~~a~~~~~R~y 395 (526)
+|+.. .+-... ...... .-.....-|||++++.|+.+ + .+.+||..+.+- ..+.... .+
T Consensus 253 wd~~~--~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d-~------------~i~vwd~~~~~~~~~~~~h~-~~-- 314 (340)
T 1got_B 253 FDLRA--DQELMTYSHDNIICGITSVSFSKSGRLLLAGYDD-F------------NCNVWDALKADRAGVLAGHD-NR-- 314 (340)
T ss_dssp EETTT--TEEEEEECCTTCCSCEEEEEECTTSSEEEEEETT-S------------EEEEEETTTCCEEEEEECCS-SC--
T ss_pred EECCC--CcEEEEEccCCcccceEEEEECCCCCEEEEECCC-C------------eEEEEEcccCcEeeEeecCC-Cc--
Confidence 77642 111111 111000 11122346899999998865 2 578999876532 1221111 01
Q ss_pred cccceecCCCEEEEecCCC
Q 043369 396 HSTAHLLSDGRVLVGGSNP 414 (526)
Q Consensus 396 hs~a~LlpdG~V~v~GG~~ 414 (526)
-.+...-|||+.++.||..
T Consensus 315 v~~~~~s~dg~~l~s~s~D 333 (340)
T 1got_B 315 VSCLGVTDDGMAVATGSWD 333 (340)
T ss_dssp EEEEEECTTSSCEEEEETT
T ss_pred EEEEEEcCCCCEEEEEcCC
Confidence 1123346899999998854
No 26
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.64 E-value=0.0087 Score=58.16 Aligned_cols=245 Identities=14% Similarity=0.088 Sum_probs=127.8
Q ss_pred eEEEEeCCCCcEE----eCcc-CCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcc-cccce
Q 043369 86 HAVEFDPITRKVR----PLTI-QTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISP-RWYAS 159 (526)
Q Consensus 86 ~~~~yDp~t~~w~----~~~~-~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~-R~y~s 159 (526)
...+||..+++.. .+.. .+..........++|+.+++|+.. ..+.+||.. +.+.... ..+... ..-.+
T Consensus 73 ~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~~~d~~-~~~~~~~--~~~~~~~~~i~~ 146 (337)
T 1gxr_A 73 CVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEA---STLSIWDLA-APTPRIK--AELTSSAPACYA 146 (337)
T ss_dssp EEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESS---SEEEEEECC-CC--EEE--EEEECSSSCEEE
T ss_pred eEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCC---CcEEEEECC-CCCccee--eecccCCCceEE
Confidence 3667888765422 1111 122222334566789999998763 578999987 6553322 112111 11223
Q ss_pred eEEecCCcEEEEcCccCCeEEEE-cCCCCCCCccee-ecCCccccCCCCCCCCCCcceEEEecCCcEEEEEccc--eEEE
Q 043369 160 NQILPNGKIIVVGGRFQFTYEFI-PRTSDSDRKILY-QLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDR--AILL 235 (526)
Q Consensus 160 ~~~L~dG~v~viGG~~~~~~E~y-P~~~~~~~~~w~-~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~~--~~~y 235 (526)
.+..++|+.+++|+.++ .+.+| ..+. +.. .+... . ... -.+...++|+.++.++.+ ..+|
T Consensus 147 ~~~~~~~~~l~~~~~dg-~v~~~d~~~~-----~~~~~~~~~--~-------~~i-~~~~~~~~~~~l~~~~~dg~i~~~ 210 (337)
T 1gxr_A 147 LAISPDSKVCFSCCSDG-NIAVWDLHNQ-----TLVRQFQGH--T-------DGA-SCIDISNDGTKLWTGGLDNTVRSW 210 (337)
T ss_dssp EEECTTSSEEEEEETTS-CEEEEETTTT-----EEEEEECCC--S-------SCE-EEEEECTTSSEEEEEETTSEEEEE
T ss_pred EEECCCCCEEEEEeCCC-cEEEEeCCCC-----ceeeeeecc--c-------Cce-EEEEECCCCCEEEEEecCCcEEEE
Confidence 45556899999888764 46667 4433 211 11110 0 001 123345689888888754 6789
Q ss_pred eccCCeEEEeccCCCCCCCCccCCCCceeecccccccccccccCCCCCccCcEEEEEcCCCCCCCchhhhhhcccccccc
Q 043369 236 DYVNNRVMKNYPVMPGGISRNYPSTGSSVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKS 315 (526)
Q Consensus 236 Dp~t~~w~~~~p~~p~~~~r~y~~~g~~v~lp~~~~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s 315 (526)
|..+.+-...+. .+.. . .++ ... .+++.+++|+.+. .
T Consensus 211 d~~~~~~~~~~~-~~~~---v-----~~~--~~s---------------~~~~~l~~~~~~~-----------------~ 247 (337)
T 1gxr_A 211 DLREGRQLQQHD-FTSQ---I-----FSL--GYC---------------PTGEWLAVGMESS-----------------N 247 (337)
T ss_dssp ETTTTEEEEEEE-CSSC---E-----EEE--EEC---------------TTSSEEEEEETTS-----------------C
T ss_pred ECCCCceEeeec-CCCc---e-----EEE--EEC---------------CCCCEEEEEcCCC-----------------c
Confidence 998877543221 1110 0 111 111 2667777776541 2
Q ss_pred eEEEEeecCCCCceecccCccccccceEEeCCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCcEeecCCCCccccc
Q 043369 316 CGRLTITAQNPKWEMEEMPLNRVMGDMILLPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINRFRILSPSLIPRLY 395 (526)
Q Consensus 316 ~~~~d~~~~~~~W~~~~M~~~R~~~~~vvLpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~Wt~~a~~~~~R~y 395 (526)
+..||+.. ....+.. .....-.+....|||+.+++++.+ | .+.+||..+.+-..... ....
T Consensus 248 i~~~~~~~-~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d-g------------~i~~~~~~~~~~~~~~~--~~~~- 308 (337)
T 1gxr_A 248 VEVLHVNK-PDKYQLH--LHESCVLSLKFAYCGKWFVSTGKD-N------------LLNAWRTPYGASIFQSK--ESSS- 308 (337)
T ss_dssp EEEEETTS-SCEEEEC--CCSSCEEEEEECTTSSEEEEEETT-S------------EEEEEETTTCCEEEEEE--CSSC-
T ss_pred EEEEECCC-CCeEEEc--CCccceeEEEECCCCCEEEEecCC-C------------cEEEEECCCCeEEEEec--CCCc-
Confidence 45677642 1111111 111112233456899999988764 2 56899988875432111 1111
Q ss_pred cccceecCCCEEEEecCCC
Q 043369 396 HSTAHLLSDGRVLVGGSNP 414 (526)
Q Consensus 396 hs~a~LlpdG~V~v~GG~~ 414 (526)
-....+.|||+.+++|+..
T Consensus 309 v~~~~~s~~~~~l~~~~~d 327 (337)
T 1gxr_A 309 VLSCDISVDDKYIVTGSGD 327 (337)
T ss_dssp EEEEEECTTSCEEEEEETT
T ss_pred EEEEEECCCCCEEEEecCC
Confidence 1123456899999988853
No 27
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.63 E-value=0.016 Score=57.32 Aligned_cols=244 Identities=8% Similarity=0.032 Sum_probs=127.0
Q ss_pred EEEEeCCCCcEEeCcc--CCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCc-ccccceeEEe
Q 043369 87 AVEFDPITRKVRPLTI--QTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLIS-PRWYASNQIL 163 (526)
Q Consensus 87 ~~~yDp~t~~w~~~~~--~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~-~R~y~s~~~L 163 (526)
..+||..+++...... .+.........-+++.+++.|+.+ ..++++|.. +.+-... +.. +..-.+++.-
T Consensus 60 v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D---~~i~lWd~~-~~~~~~~----~~~~~~~~~~~~~s 131 (321)
T 3ow8_A 60 VKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLD---AHIRLWDLE-NGKQIKS----IDAGPVDAWTLAFS 131 (321)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETT---SEEEEEETT-TTEEEEE----EECCTTCCCCEEEC
T ss_pred EEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCC---CcEEEEECC-CCCEEEE----EeCCCccEEEEEEC
Confidence 5667766655432211 122212223445688899998864 578999987 5432211 111 1111235556
Q ss_pred cCCcEEEEcCccCCeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEccc--eEEEeccCC
Q 043369 164 PNGKIIVVGGRFQFTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDR--AILLDYVNN 240 (526)
Q Consensus 164 ~dG~v~viGG~~~~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~~--~~~yDp~t~ 240 (526)
+||+.++.|+.++ .+.+| ..+.. .-..+.. . . .. --.+...+||+.++.|+.+ ..+||..++
T Consensus 132 pdg~~l~~g~~dg-~v~i~~~~~~~----~~~~~~~---~-~-----~~-v~~~~~spdg~~lasg~~dg~i~iwd~~~~ 196 (321)
T 3ow8_A 132 PDSQYLATGTHVG-KVNIFGVESGK----KEYSLDT---R-G-----KF-ILSIAYSPDGKYLASGAIDGIINIFDIATG 196 (321)
T ss_dssp TTSSEEEEECTTS-EEEEEETTTCS----EEEEEEC---S-S-----SC-EEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred CCCCEEEEEcCCC-cEEEEEcCCCc----eeEEecC---C-C-----ce-EEEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 7999999988764 46667 43331 1111110 0 0 00 1123345799999998754 678999988
Q ss_pred eEEEeccCCCCCCCCccCCCCceeecccccccccccccCCCCCccCcEEEEEcCCCCCCCchhhhhhcccccccceEEEE
Q 043369 241 RVMKNYPVMPGGISRNYPSTGSSVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLT 320 (526)
Q Consensus 241 ~w~~~~p~~p~~~~r~y~~~g~~v~lp~~~~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d 320 (526)
+-.+.+ ... ..+ -.++. .. .++++++.|+.+. ++..+|
T Consensus 197 ~~~~~~---~~h---~~~--v~~l~--~s---------------pd~~~l~s~s~dg-----------------~i~iwd 234 (321)
T 3ow8_A 197 KLLHTL---EGH---AMP--IRSLT--FS---------------PDSQLLVTASDDG-----------------YIKIYD 234 (321)
T ss_dssp EEEEEE---CCC---SSC--CCEEE--EC---------------TTSCEEEEECTTS-----------------CEEEEE
T ss_pred cEEEEE---ccc---CCc--eeEEE--Ec---------------CCCCEEEEEcCCC-----------------eEEEEE
Confidence 755333 211 110 01111 11 2678888888652 245677
Q ss_pred eecCCCCceecccC-ccccccceEEeCCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCcEe-ecCCCCcccccccc
Q 043369 321 ITAQNPKWEMEEMP-LNRVMGDMILLPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINRFR-ILSPSLIPRLYHST 398 (526)
Q Consensus 321 ~~~~~~~W~~~~M~-~~R~~~~~vvLpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~Wt-~~a~~~~~R~yhs~ 398 (526)
+.. ..... .+. ....-.+...-|||+.++.|+.+ + ++.+||..+.+-. .+... ...-..
T Consensus 235 ~~~--~~~~~-~~~~h~~~v~~~~~sp~~~~l~s~s~D-~------------~v~iwd~~~~~~~~~~~~h---~~~v~~ 295 (321)
T 3ow8_A 235 VQH--ANLAG-TLSGHASWVLNVAFCPDDTHFVSSSSD-K------------SVKVWDVGTRTCVHTFFDH---QDQVWG 295 (321)
T ss_dssp TTT--CCEEE-EECCCSSCEEEEEECTTSSEEEEEETT-S------------CEEEEETTTTEEEEEECCC---SSCEEE
T ss_pred CCC--cceeE-EEcCCCCceEEEEECCCCCEEEEEeCC-C------------cEEEEeCCCCEEEEEEcCC---CCcEEE
Confidence 542 22111 111 11111123456899999998865 2 5789998876422 11111 111112
Q ss_pred ceecCCCEEEEecCCC
Q 043369 399 AHLLSDGRVLVGGSNP 414 (526)
Q Consensus 399 a~LlpdG~V~v~GG~~ 414 (526)
....|||+.++.||..
T Consensus 296 v~~s~~g~~l~s~~~d 311 (321)
T 3ow8_A 296 VKYNGNGSKIVSVGDD 311 (321)
T ss_dssp EEECTTSSEEEEEETT
T ss_pred EEECCCCCEEEEEeCC
Confidence 3456899999988853
No 28
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.45 E-value=0.084 Score=50.26 Aligned_cols=152 Identities=11% Similarity=0.044 Sum_probs=82.0
Q ss_pred eeEEEEecCCeEEEEecccCCCCCccCCCCccccCccccCCCCcceEEEEeCCCCcEEeCccC-CccccccceEcCCCcE
Q 043369 41 AMHMALLPNDRIIAFDRSHFGPSNITLPQGKCIKGVELETSDCYAHAVEFDPITRKVRPLTIQ-TDTWCSSGALLANGVL 119 (526)
Q Consensus 41 ~~~~a~l~~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~yDp~t~~w~~~~~~-~~~fc~~~~~l~~G~l 119 (526)
+...+.-++|++|+-.... .....||+. ++++..... ......+.+...+|++
T Consensus 17 ~~~i~~d~~g~l~v~~~~~-------------------------~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l 70 (299)
T 2z2n_A 17 PYGITVSDKGKVWITQHKA-------------------------NMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEV 70 (299)
T ss_dssp EEEEEECTTSCEEEEETTT-------------------------TEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCE
T ss_pred ccceEECCCCCEEEEecCC-------------------------CcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCE
Confidence 4455556799988864321 135678888 777654422 1122222344478999
Q ss_pred EEEcCCCCCccEEEEEcCCCCCCcccccCCCCC-cccccceeEEecCCcEEEEcCccCCeEEEE-cCCCCCCCcceeecC
Q 043369 120 VQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLI-SPRWYASNQILPNGKIIVVGGRFQFTYEFI-PRTSDSDRKILYQLP 197 (526)
Q Consensus 120 ~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~-~~R~y~s~~~L~dG~v~viGG~~~~~~E~y-P~~~~~~~~~w~~~p 197 (526)
++.... ...+..||+. . ++... .++ ....-.+++.-++|++|+..... ..+.+| + ++ ......
T Consensus 71 ~v~~~~---~~~i~~~~~~-g-~~~~~---~~~~~~~~~~~i~~~~~g~l~v~~~~~-~~i~~~d~-~g-----~~~~~~ 135 (299)
T 2z2n_A 71 WFTENA---ANKIGRITKK-G-IIKEY---TLPNPDSAPYGITEGPNGDIWFTEMNG-NRIGRITD-DG-----KIREYE 135 (299)
T ss_dssp EEEETT---TTEEEEECTT-S-CEEEE---ECSSTTCCEEEEEECTTSCEEEEETTT-TEEEEECT-TC-----CEEEEE
T ss_pred EEeCCC---CCeEEEECCC-C-cEEEE---eCCCcCCCceeeEECCCCCEEEEecCC-ceEEEECC-CC-----CEEEec
Confidence 998643 2468889986 3 34333 121 11222344555689999875432 345556 5 33 222111
Q ss_pred CccccCCCCCCCCCCcceE-EEecCCcEEEEEc--cceEEEeccCCeEE
Q 043369 198 FLKETMHSPKIPNNLYPFL-HLSTDGNLFIFAN--DRAILLDYVNNRVM 243 (526)
Q Consensus 198 ~l~~~~~~~~~~~~~yp~~-~~~~dG~Iy~~Gg--~~~~~yDp~t~~w~ 243 (526)
.. .. ...|.. ..-++|++|+... ....+||+ +++..
T Consensus 136 ~~-~~--------~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~ 174 (299)
T 2z2n_A 136 LP-NK--------GSYPSFITLGSDNALWFTENQNNAIGRITE-SGDIT 174 (299)
T ss_dssp CS-ST--------TCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEE
T ss_pred CC-CC--------CCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEE
Confidence 10 00 112333 3345899998763 35778999 66654
No 29
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.45 E-value=0.033 Score=55.83 Aligned_cols=248 Identities=13% Similarity=0.104 Sum_probs=124.8
Q ss_pred eEEEEeCCCCcEEeCccCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCc---ccccCCCCCccccc-ceeE
Q 043369 86 HAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDW---EEDHQNGLISPRWY-ASNQ 161 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W---~~~~~~~m~~~R~y-~s~~ 161 (526)
...+||..+.+....-..+..+-......++|..+++||.. ..+.+|+.. ...- ... ...+.....+ .++.
T Consensus 87 ~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d---~~i~v~~~~-~~~~~~~~~~-~~~~~~h~~~v~~~~ 161 (354)
T 2pbi_B 87 KVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLD---NKCSVYPLT-FDKNENMAAK-KKSVAMHTNYLSACS 161 (354)
T ss_dssp EEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTT---SEEEEEECC-CCTTCCSGGG-CEEEEECSSCEEEEE
T ss_pred eEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCC---CCEEEEEEe-cccccccccc-ceeeeccCCcEEEEE
Confidence 46789987776544332333333345567899999999974 577888764 2211 000 0011111111 2233
Q ss_pred EecCCcEEEEcCccCCeEEEE-cCCCCCCCccee-ecCCccccCCCCCCCCCCcceEEEec--CCcEEEEEccc--eEEE
Q 043369 162 ILPNGKIIVVGGRFQFTYEFI-PRTSDSDRKILY-QLPFLKETMHSPKIPNNLYPFLHLST--DGNLFIFANDR--AILL 235 (526)
Q Consensus 162 ~L~dG~v~viGG~~~~~~E~y-P~~~~~~~~~w~-~~p~l~~~~~~~~~~~~~yp~~~~~~--dG~Iy~~Gg~~--~~~y 235 (526)
..++++.++.|+.+ .++.+| ..+. ... .+.. .. .... .....+ +|+.++.|+.+ ..+|
T Consensus 162 ~~~~~~~l~t~s~D-~~v~lwd~~~~-----~~~~~~~~--h~-------~~v~-~~~~~~~~~g~~l~sgs~Dg~v~~w 225 (354)
T 2pbi_B 162 FTNSDMQILTASGD-GTCALWDVESG-----QLLQSFHG--HG-------ADVL-CLDLAPSETGNTFVSGGCDKKAMVW 225 (354)
T ss_dssp ECSSSSEEEEEETT-SEEEEEETTTC-----CEEEEEEC--CS-------SCEE-EEEECCCSSCCEEEEEETTSCEEEE
T ss_pred EeCCCCEEEEEeCC-CcEEEEeCCCC-----eEEEEEcC--CC-------CCeE-EEEEEeCCCCCEEEEEeCCCeEEEE
Confidence 34577777777655 357777 4443 211 1110 00 0001 111223 57888888754 6789
Q ss_pred eccCCeEEEeccCCCCCCCCccCCCCceeecccccccccccccCCCCCccCcEEEEEcCCCCCCCchhhhhhcccccccc
Q 043369 236 DYVNNRVMKNYPVMPGGISRNYPSTGSSVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKS 315 (526)
Q Consensus 236 Dp~t~~w~~~~p~~p~~~~r~y~~~g~~v~lp~~~~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s 315 (526)
|..+++..+.+ ... . ....-+... -+++.++.|+.+. +
T Consensus 226 d~~~~~~~~~~---~~h---~----~~v~~v~~~---------------p~~~~l~s~s~D~-----------------~ 263 (354)
T 2pbi_B 226 DMRSGQCVQAF---ETH---E----SDVNSVRYY---------------PSGDAFASGSDDA-----------------T 263 (354)
T ss_dssp ETTTCCEEEEE---CCC---S----SCEEEEEEC---------------TTSSEEEEEETTS-----------------C
T ss_pred ECCCCcEEEEe---cCC---C----CCeEEEEEe---------------CCCCEEEEEeCCC-----------------e
Confidence 99887755333 111 0 111111111 1567788887651 3
Q ss_pred eEEEEeecCCCCceec-ccCccccc-cceEEeCCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCc-EeecCCCCcc
Q 043369 316 CGRLTITAQNPKWEME-EMPLNRVM-GDMILLPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINR-FRILSPSLIP 392 (526)
Q Consensus 316 ~~~~d~~~~~~~W~~~-~M~~~R~~-~~~vvLpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~-Wt~~a~~~~~ 392 (526)
+..+|+.. ..-... .-...... .....-|+|+++++|+.+ + ++.+||..+.+ -..+.. -
T Consensus 264 v~lwd~~~--~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d-~------------~i~vwd~~~~~~~~~l~~---h 325 (354)
T 2pbi_B 264 CRLYDLRA--DREVAIYSKESIIFGASSVDFSLSGRLLFAGYND-Y------------TINVWDVLKGSRVSILFG---H 325 (354)
T ss_dssp EEEEETTT--TEEEEEECCTTCCSCEEEEEECTTSSEEEEEETT-S------------CEEEEETTTCSEEEEECC---C
T ss_pred EEEEECCC--CcEEEEEcCCCcccceeEEEEeCCCCEEEEEECC-C------------cEEEEECCCCceEEEEEC---C
Confidence 45677642 111110 10111111 122345899999998765 2 57899987663 222211 1
Q ss_pred ccccccceecCCCEEEEecCCC
Q 043369 393 RLYHSTAHLLSDGRVLVGGSNP 414 (526)
Q Consensus 393 R~yhs~a~LlpdG~V~v~GG~~ 414 (526)
...-.+...-|||+.+++|+..
T Consensus 326 ~~~v~~l~~spdg~~l~sgs~D 347 (354)
T 2pbi_B 326 ENRVSTLRVSPDGTAFCSGSWD 347 (354)
T ss_dssp SSCEEEEEECTTSSCEEEEETT
T ss_pred CCcEEEEEECCCCCEEEEEcCC
Confidence 1111223456899999999854
No 30
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.44 E-value=0.087 Score=50.21 Aligned_cols=263 Identities=12% Similarity=0.077 Sum_probs=132.7
Q ss_pred ceeEEEEecCCeEEEEecccCCCCCccCCCCccccCccccCCCCcceEEEEeCCCCcEEeCccCCc-cccccceEcCCCc
Q 043369 40 SAMHMALLPNDRIIAFDRSHFGPSNITLPQGKCIKGVELETSDCYAHAVEFDPITRKVRPLTIQTD-TWCSSGALLANGV 118 (526)
Q Consensus 40 ~~~~~a~l~~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~yDp~t~~w~~~~~~~~-~fc~~~~~l~~G~ 118 (526)
.+..+++-++|++|+.+... + ....||+. ++++....... ....+.+...+|+
T Consensus 21 ~p~~i~~d~~g~l~v~~~~~----------~---------------~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~ 74 (300)
T 2qc5_A 21 GPYGITSSEDGKVWFTQHKA----------N---------------KISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGD 74 (300)
T ss_dssp CEEEEEECTTSCEEEEETTT----------T---------------EEEEECTT-SCEEEEECSSTTCCEEEEEECTTSC
T ss_pred CcceeeECCCCCEEEEcCCC----------C---------------eEEEECCC-CceEEEECCCCCCcceeEEECCCCC
Confidence 45566666799999875421 1 35678887 77665432211 2222334457899
Q ss_pred EEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCc-ccccceeEEecCCcEEEEcCccCCeEEEE-cCCCCCCCcceeec
Q 043369 119 LVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLIS-PRWYASNQILPNGKIIVVGGRFQFTYEFI-PRTSDSDRKILYQL 196 (526)
Q Consensus 119 l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~-~R~y~s~~~L~dG~v~viGG~~~~~~E~y-P~~~~~~~~~w~~~ 196 (526)
+++.... ...+..||+. .++... .++. ...-.+++.-++|++|+..... ..+..| +. + +....
T Consensus 75 l~v~~~~---~~~v~~~d~~--g~~~~~---~~~~~~~~~~~i~~~~~g~l~v~~~~~-~~i~~~~~~-g-----~~~~~ 139 (300)
T 2qc5_A 75 IWFTENG---ANKIGKLSKK--GGFTEY---PLPQPDSGPYGITEGLNGDIWFTQLNG-DRIGKLTAD-G-----TIYEY 139 (300)
T ss_dssp EEEEETT---TTEEEEECTT--SCEEEE---ECSSTTCCEEEEEECSTTCEEEEETTT-TEEEEECTT-S-----CEEEE
T ss_pred EEEEecC---CCeEEEECCC--CCeEEe---cCCCCCCCCccceECCCCCEEEEccCC-CeEEEECCC-C-----CEEEc
Confidence 9997642 2568899986 344433 1211 1222344555689999875432 245556 54 3 22211
Q ss_pred CCccccCCCCCCCCCCcceEE-EecCCcEEEEE--ccceEEEeccCCeEEEeccCCCCCCCCccCCCCceeecccccccc
Q 043369 197 PFLKETMHSPKIPNNLYPFLH-LSTDGNLFIFA--NDRAILLDYVNNRVMKNYPVMPGGISRNYPSTGSSVLLPVNLSSI 273 (526)
Q Consensus 197 p~l~~~~~~~~~~~~~yp~~~-~~~dG~Iy~~G--g~~~~~yDp~t~~w~~~~p~~p~~~~r~y~~~g~~v~lp~~~~~~ 273 (526)
.. ... ...|... .-++|+||+.. +....+||+ +++... +. ++.. -.+| .+.++ .
T Consensus 140 ~~-~~~--------~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~-~~~~--~~~~-~~i~~----d---- 196 (300)
T 2qc5_A 140 DL-PNK--------GSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEE-YP-LPTN--AAAP-VGITS----G---- 196 (300)
T ss_dssp EC-SST--------TCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EE-CSST--TCCE-EEEEE----C----
T ss_pred cC-CCC--------CCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEE-ee-CCCC--CCCc-ceEEE----C----
Confidence 11 000 1134443 34689998876 345778998 555542 32 2221 1111 11111 1
Q ss_pred cccccCCCCCccCcEEEEEcCCCCCCCchhhhhhcccccccceEEEEeecCCCCceecccCccccc-cceEEeCCCcEEE
Q 043369 274 NVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTITAQNPKWEMEEMPLNRVM-GDMILLPTGDVLI 352 (526)
Q Consensus 274 ~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M~~~R~~-~~~vvLpdG~V~v 352 (526)
.+++||+..... ..+.+||+ +.++....++..-.. .+.++-++|+||+
T Consensus 197 -----------~~g~l~v~~~~~-----------------~~i~~~~~---~g~~~~~~~~~~~~~~~~i~~d~~g~l~v 245 (300)
T 2qc5_A 197 -----------NDGALWFVEIMG-----------------NKIGRITT---TGEISEYDIPTPNARPHAITAGKNSEIWF 245 (300)
T ss_dssp -----------TTSSEEEEETTT-----------------TEEEEECT---TCCEEEEECSSTTCCEEEEEECSTTCEEE
T ss_pred -----------CCCCEEEEccCC-----------------CEEEEEcC---CCcEEEEECCCCCCCceEEEECCCCCEEE
Confidence 267788865321 13456665 233332222211111 1334457899998
Q ss_pred EcCcCCCCCCccCCCCCccccEEEeCCCCcEeecCCCCccccccccceecCCCEEEEecC
Q 043369 353 INGAAKGTAGWGAAREPVLNPVIYCPKINRFRILSPSLIPRLYHSTAHLLSDGRVLVGGS 412 (526)
Q Consensus 353 vGG~~~g~~g~~~~~~~~~~~e~YDP~t~~Wt~~a~~~~~R~yhs~a~LlpdG~V~v~GG 412 (526)
..-.. ..+.+||+ +.+++...-......-++ ..+.+||++|++..
T Consensus 246 ~~~~~-------------~~i~~~~~-~g~~~~~~~~~~~~~~~~-i~~~~~g~l~v~~~ 290 (300)
T 2qc5_A 246 TEWGA-------------NQIGRITN-DNTIQEYQLQTENAEPHG-ITFGKDGSVWFALK 290 (300)
T ss_dssp EETTT-------------TEEEEECT-TSCEEEEECCSTTCCCCC-EEECTTSCEEEECS
T ss_pred eccCC-------------CeEEEECC-CCcEEEEECCccCCccce-eEeCCCCCEEEEcc
Confidence 76321 14678898 455554321100111123 34468999999765
No 31
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=97.44 E-value=0.04 Score=54.05 Aligned_cols=289 Identities=9% Similarity=-0.001 Sum_probs=142.4
Q ss_pred EEEEecCCeEEEEecccCCCCCccCCCCccccCccccCCCCcceEEEEeCCCCcEEeCccCCccccccceEcCCCcEEEE
Q 043369 43 HMALLPNDRIIAFDRSHFGPSNITLPQGKCIKGVELETSDCYAHAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQT 122 (526)
Q Consensus 43 ~~a~l~~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~v~ 122 (526)
.++.-++|+.++.++.+ | ...+||..+++....-..+..........++|+.+++
T Consensus 37 ~~~~s~~~~~l~~~~~d----------g---------------~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 91 (369)
T 3zwl_B 37 QVKYNKEGDLLFSCSKD----------S---------------SASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVT 91 (369)
T ss_dssp EEEECTTSCEEEEEESS----------S---------------CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred EEEEcCCCCEEEEEeCC----------C---------------EEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEE
Confidence 34445788888877643 2 3668898777654332222222223455678999999
Q ss_pred cCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEecCCcEEEEcCcc----CCeEEEE-cCCCCCCCcceeecC
Q 043369 123 GGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPNGKIIVVGGRF----QFTYEFI-PRTSDSDRKILYQLP 197 (526)
Q Consensus 123 GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~dG~v~viGG~~----~~~~E~y-P~~~~~~~~~w~~~p 197 (526)
|+.+ ..+.+||.. +.+-... +.....-.+++..++|+.+++++.+ ...+.+| ...... ...+....
T Consensus 92 ~~~d---g~i~iwd~~-~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~-~~~~~~~~ 162 (369)
T 3zwl_B 92 GSAD---YSIKLWDVS-NGQCVAT----WKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSA-THELTKVS 162 (369)
T ss_dssp EETT---TEEEEEETT-TCCEEEE----EECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTT-TCCEEEEC
T ss_pred EeCC---CeEEEEECC-CCcEEEE----eecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCcc-ceeecccc
Confidence 8863 478999987 5543322 1222223445566789988888765 1345566 322210 00111110
Q ss_pred --CccccCCCCCCCCCCcceEEEecCCcEEEEEccc--eEEEeccC-CeEEEeccCCCCCCCCccCCCCceeeccccccc
Q 043369 198 --FLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDR--AILLDYVN-NRVMKNYPVMPGGISRNYPSTGSSVLLPVNLSS 272 (526)
Q Consensus 198 --~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~~--~~~yDp~t-~~w~~~~p~~p~~~~r~y~~~g~~v~lp~~~~~ 272 (526)
........ ........+...++|+.++.|+.+ ..+||..+ .+....+. .. .+...-+...
T Consensus 163 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---~~-------~~~v~~~~~~--- 227 (369)
T 3zwl_B 163 EEPIHKIITH--EGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSID---LH-------EKSISDMQFS--- 227 (369)
T ss_dssp SSCSEEEECC--TTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEE---CC-------SSCEEEEEEC---
T ss_pred cceeeeccCC--cCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEe---cC-------CCceeEEEEC---
Confidence 00000000 000011123345688888888754 67899987 44332221 11 0111111111
Q ss_pred ccccccCCCCCccCcEEEEEcCCCCCCCchhhhhhcccccccceEEEEeecCCCCceecccCccccccceEEeCCCcEEE
Q 043369 273 INVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTITAQNPKWEMEEMPLNRVMGDMILLPTGDVLI 352 (526)
Q Consensus 273 ~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M~~~R~~~~~vvLpdG~V~v 352 (526)
.+++.+++|+.+. .+..+|+.. .+.... +............|+|+.++
T Consensus 228 ------------~~~~~l~~~~~d~-----------------~i~v~d~~~--~~~~~~-~~~~~~~~~~~~~~~~~~l~ 275 (369)
T 3zwl_B 228 ------------PDLTYFITSSRDT-----------------NSFLVDVST--LQVLKK-YETDCPLNTAVITPLKEFII 275 (369)
T ss_dssp ------------TTSSEEEEEETTS-----------------EEEEEETTT--CCEEEE-EECSSCEEEEEECSSSSEEE
T ss_pred ------------CCCCEEEEecCCc-----------------eEEEEECCC--Cceeee-ecCCCCceeEEecCCCceEE
Confidence 2567777776541 345677642 221111 11122222445678999999
Q ss_pred EcCcCCCCCCcc-CCCCCccccEEEeCCCCcEe-ecCCCCccccccccceecCCCEEEEecCCCC
Q 043369 353 INGAAKGTAGWG-AAREPVLNPVIYCPKINRFR-ILSPSLIPRLYHSTAHLLSDGRVLVGGSNPN 415 (526)
Q Consensus 353 vGG~~~g~~g~~-~~~~~~~~~e~YDP~t~~Wt-~~a~~~~~R~yhs~a~LlpdG~V~v~GG~~~ 415 (526)
+|+...+..-+. ........+.+||..+.+-. .+... ...-.....-|||+.+++|+...
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~---~~~v~~~~~s~~~~~l~s~~~dg 337 (369)
T 3zwl_B 276 LGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGH---FGPLNTVAISPQGTSYASGGEDG 337 (369)
T ss_dssp EEECCC-------------CEEEEEETTTCCEEEEEECC---SSCEEEEEECTTSSEEEEEETTS
T ss_pred EeecCCCceEEEEecCCCcceeEEEecCCCcchhheecc---cCcEEEEEECCCCCEEEEEcCCC
Confidence 998652211110 01112235788998777422 11111 11112234568999999998643
No 32
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.42 E-value=0.018 Score=55.85 Aligned_cols=224 Identities=15% Similarity=0.149 Sum_probs=117.4
Q ss_pred ceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCC---CcccccceeEEecCCcEEEEcCccCCeEEEE-cCCC
Q 043369 111 GALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGL---ISPRWYASNQILPNGKIIVVGGRFQFTYEFI-PRTS 186 (526)
Q Consensus 111 ~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m---~~~R~y~s~~~L~dG~v~viGG~~~~~~E~y-P~~~ 186 (526)
....++|+++++|+ . ..+.+||.. +...... ...+ .....-.+++..+||+.+++|+.++ .+.+| ..+.
T Consensus 57 ~~~~~~~~~l~~~~-d---g~i~iw~~~-~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-~i~~~d~~~~ 129 (337)
T 1gxr_A 57 VTISNPTRHVYTGG-K---GCVKVWDIS-HPGNKSP-VSQLDCLNRDNYIRSCKLLPDGCTLIVGGEAS-TLSIWDLAAP 129 (337)
T ss_dssp EEECSSSSEEEEEC-B---SEEEEEETT-STTCCSC-SEEEECSCTTSBEEEEEECTTSSEEEEEESSS-EEEEEECCCC
T ss_pred EEEecCCcEEEEcC-C---CeEEEEECC-CCCceee-eecccccCCCCcEEEEEEcCCCCEEEEEcCCC-cEEEEECCCC
Confidence 34567899999998 2 578899986 4432111 0001 1222233455666899888887654 56777 4443
Q ss_pred CCCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEcc--ceEEEeccCCeEEEeccCCCCCCCCccCCCCcee
Q 043369 187 DSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFAND--RAILLDYVNNRVMKNYPVMPGGISRNYPSTGSSV 264 (526)
Q Consensus 187 ~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~--~~~~yDp~t~~w~~~~p~~p~~~~r~y~~~g~~v 264 (526)
.......+.... .... .+...++|+.++.|+. ...+||..+++....+. .. . +...
T Consensus 130 -----~~~~~~~~~~~~------~~i~-~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~---~~--~-----~~i~ 187 (337)
T 1gxr_A 130 -----TPRIKAELTSSA------PACY-ALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ---GH--T-----DGAS 187 (337)
T ss_dssp -------EEEEEEECSS------SCEE-EEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC---CC--S-----SCEE
T ss_pred -----CcceeeecccCC------CceE-EEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeee---cc--c-----CceE
Confidence 221111111100 0011 2234568888888875 46789998887553332 11 0 1111
Q ss_pred ecccccccccccccCCCCCccCcEEEEEcCCCCCCCchhhhhhcccccccceEEEEeecCCCCceecccCccccccceEE
Q 043369 265 LLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTITAQNPKWEMEEMPLNRVMGDMIL 344 (526)
Q Consensus 265 ~lp~~~~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M~~~R~~~~~vv 344 (526)
-+... .+++.+++|+.+. .+..+|+.. .+-.. .......-.+...
T Consensus 188 ~~~~~---------------~~~~~l~~~~~dg-----------------~i~~~d~~~--~~~~~-~~~~~~~v~~~~~ 232 (337)
T 1gxr_A 188 CIDIS---------------NDGTKLWTGGLDN-----------------TVRSWDLRE--GRQLQ-QHDFTSQIFSLGY 232 (337)
T ss_dssp EEEEC---------------TTSSEEEEEETTS-----------------EEEEEETTT--TEEEE-EEECSSCEEEEEE
T ss_pred EEEEC---------------CCCCEEEEEecCC-----------------cEEEEECCC--CceEe-eecCCCceEEEEE
Confidence 11111 2566777776541 345677642 11111 1111111223345
Q ss_pred eCCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCcEeecCCCCccccccccceecCCCEEEEecCCC
Q 043369 345 LPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINRFRILSPSLIPRLYHSTAHLLSDGRVLVGGSNP 414 (526)
Q Consensus 345 LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~Wt~~a~~~~~R~yhs~a~LlpdG~V~v~GG~~ 414 (526)
.|||+.+++|+.+ + .+.+||..+.+-..+.... ..-......|||+.+++|+..
T Consensus 233 s~~~~~l~~~~~~-~------------~i~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~~d 286 (337)
T 1gxr_A 233 CPTGEWLAVGMES-S------------NVEVLHVNKPDKYQLHLHE---SCVLSLKFAYCGKWFVSTGKD 286 (337)
T ss_dssp CTTSSEEEEEETT-S------------CEEEEETTSSCEEEECCCS---SCEEEEEECTTSSEEEEEETT
T ss_pred CCCCCEEEEEcCC-C------------cEEEEECCCCCeEEEcCCc---cceeEEEECCCCCEEEEecCC
Confidence 6899999998754 1 4688998887533322211 111223456899999988853
No 33
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.42 E-value=0.03 Score=56.09 Aligned_cols=133 Identities=17% Similarity=0.189 Sum_probs=71.7
Q ss_pred eEEEEeCCCCcEEeCccCCccccccceEcCCCcEE-EEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEec
Q 043369 86 HAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLV-QTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILP 164 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~-v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~ 164 (526)
...+||..+++....-..+.. ....+.-++|+.+ +.|+. ...+++||.. +.+.... +.....-.+++.-+
T Consensus 13 ~v~v~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~---d~~i~v~d~~-~~~~~~~----~~~~~~v~~~~~sp 83 (391)
T 1l0q_A 13 NISVIDVTSNKVTATIPVGSN-PMGAVISPDGTKVYVANAH---SNDVSIIDTA-TNNVIAT----VPAGSSPQGVAVSP 83 (391)
T ss_dssp EEEEEETTTTEEEEEEECSSS-EEEEEECTTSSEEEEEEGG---GTEEEEEETT-TTEEEEE----EECSSSEEEEEECT
T ss_pred EEEEEECCCCeEEEEeecCCC-cceEEECCCCCEEEEECCC---CCeEEEEECC-CCeEEEE----EECCCCccceEECC
Confidence 466788777765432222211 2234556788754 55543 2579999987 6544322 22222223455556
Q ss_pred CCcEEEEcCccCCeEEEE-cCCCCCCCccee-ecCCccccCCCCCCCCCCcce-EEEecCCc-EEEEEcc--ceEEEecc
Q 043369 165 NGKIIVVGGRFQFTYEFI-PRTSDSDRKILY-QLPFLKETMHSPKIPNNLYPF-LHLSTDGN-LFIFAND--RAILLDYV 238 (526)
Q Consensus 165 dG~v~viGG~~~~~~E~y-P~~~~~~~~~w~-~~p~l~~~~~~~~~~~~~yp~-~~~~~dG~-Iy~~Gg~--~~~~yDp~ 238 (526)
||+.++++|.....+.+| ..++ +.. .+.. + ..+. +...+||+ ||+.+.. ...+||..
T Consensus 84 dg~~l~~~~~~~~~v~v~d~~~~-----~~~~~~~~-----~-------~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~ 146 (391)
T 1l0q_A 84 DGKQVYVTNMASSTLSVIDTTSN-----TVAGTVKT-----G-------KSPLGLALSPDGKKLYVTNNGDKTVSVINTV 146 (391)
T ss_dssp TSSEEEEEETTTTEEEEEETTTT-----EEEEEEEC-----S-------SSEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred CCCEEEEEECCCCEEEEEECCCC-----eEEEEEeC-----C-------CCcceEEECCCCCEEEEEeCCCCEEEEEECC
Confidence 888665566555567788 5544 221 1111 0 0122 23456887 5566653 46789998
Q ss_pred CCeEEE
Q 043369 239 NNRVMK 244 (526)
Q Consensus 239 t~~w~~ 244 (526)
+++...
T Consensus 147 ~~~~~~ 152 (391)
T 1l0q_A 147 TKAVIN 152 (391)
T ss_dssp TTEEEE
T ss_pred CCcEEE
Confidence 887654
No 34
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.40 E-value=0.016 Score=58.63 Aligned_cols=266 Identities=8% Similarity=0.002 Sum_probs=127.8
Q ss_pred eEEEEeCCCCcEEeCccCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCC-CcccccceeEEec
Q 043369 86 HAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGL-ISPRWYASNQILP 164 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m-~~~R~y~s~~~L~ 164 (526)
...+||..+.+....-..+ ........-++|+.+++|+.. ..+.+||.. +.+-... + .....-.+++..+
T Consensus 79 ~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~d---g~i~iwd~~-~~~~~~~----~~~h~~~v~~~~~~~ 149 (420)
T 3vl1_A 79 HDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTE---GDIKVLDSN-FNLQREI----DQAHVSEITKLKFFP 149 (420)
T ss_dssp EEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETT---SCEEEECTT-SCEEEEE----TTSSSSCEEEEEECT
T ss_pred cEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECC---CCEEEEeCC-Ccceeee----cccccCccEEEEECC
Confidence 4567876554322211112 222223445689999999763 468999987 4432221 2 1222223455556
Q ss_pred CCcEEEEcCccCCeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEccc--eEEEeccCCe
Q 043369 165 NGKIIVVGGRFQFTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDR--AILLDYVNNR 241 (526)
Q Consensus 165 dG~v~viGG~~~~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~~--~~~yDp~t~~ 241 (526)
||+.++.|+.++ .+.+| ..+.. .-..+. .. . .... .+...++|+.++.|+.+ ..+||..+++
T Consensus 150 ~~~~l~s~s~d~-~i~iwd~~~~~----~~~~~~---~h-~-----~~v~-~~~~~~~~~~l~s~~~d~~v~iwd~~~~~ 214 (420)
T 3vl1_A 150 SGEALISSSQDM-QLKIWSVKDGS----NPRTLI---GH-R-----ATVT-DIAIIDRGRNVLSASLDGTIRLWECGTGT 214 (420)
T ss_dssp TSSEEEEEETTS-EEEEEETTTCC----CCEEEE---CC-S-----SCEE-EEEEETTTTEEEEEETTSCEEEEETTTTE
T ss_pred CCCEEEEEeCCC-eEEEEeCCCCc----CceEEc---CC-C-----CcEE-EEEEcCCCCEEEEEcCCCcEEEeECCCCc
Confidence 899888888664 56777 44331 111111 10 0 0111 13345689988888754 6789998877
Q ss_pred EEEeccCCCCCCCCccCCCCceeecccccccc----cccccCCCCCccCcEEEEEcCCCCCCCchhhhhhcccccccceE
Q 043369 242 VMKNYPVMPGGISRNYPSTGSSVLLPVNLSSI----NVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCG 317 (526)
Q Consensus 242 w~~~~p~~p~~~~r~y~~~g~~v~lp~~~~~~----~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~ 317 (526)
-.+.+...... ..+ .......|-....+ ...+. ...-..+++.+++|+.+. .+.
T Consensus 215 ~~~~~~~~~~~---~~~-v~~~~~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~~~~~dg-----------------~i~ 272 (420)
T 3vl1_A 215 TIHTFNRKENP---HDG-VNSIALFVGTDRQLHEISTSKKN-NLEFGTYGKYVIAGHVSG-----------------VIT 272 (420)
T ss_dssp EEEEECBTTBT---TCC-EEEEEEEECCCSSCGGGCCCCCC-TTCSSCTTEEEEEEETTS-----------------CEE
T ss_pred eeEEeecCCCC---CCC-ccEEEEecCCcceeeecccCccc-ceEEcCCCCEEEEEcCCC-----------------eEE
Confidence 55333211100 000 00000000000000 00000 000013688888887651 355
Q ss_pred EEEeecCCCCceecccCccccccceEEeCCCc-EEEEcCcCCCCCCccCCCCCccccEEEeCCCCcE--eecCCCCcccc
Q 043369 318 RLTITAQNPKWEMEEMPLNRVMGDMILLPTGD-VLIINGAAKGTAGWGAAREPVLNPVIYCPKINRF--RILSPSLIPRL 394 (526)
Q Consensus 318 ~~d~~~~~~~W~~~~M~~~R~~~~~vvLpdG~-V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~W--t~~a~~~~~R~ 394 (526)
.+|+.......+. .......-.+....|+|+ ++++|+.+ | .+.+||..+.+- ..+... ..
T Consensus 273 i~d~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~g~~d-g------------~i~vwd~~~~~~~~~~~~~~---~~ 335 (420)
T 3vl1_A 273 VHNVFSKEQTIQL-PSKFTCSCNSLTVDGNNANYIYAGYEN-G------------MLAQWDLRSPECPVGEFLIN---EG 335 (420)
T ss_dssp EEETTTCCEEEEE-CCTTSSCEEEEEECSSCTTEEEEEETT-S------------EEEEEETTCTTSCSEEEEES---TT
T ss_pred EEECCCCceeEEc-ccccCCCceeEEEeCCCCCEEEEEeCC-C------------eEEEEEcCCCcCchhhhhcc---CC
Confidence 6776431111111 111112222334568898 88888764 2 578999887631 111110 01
Q ss_pred ccccceecCCCEEEEecCCC
Q 043369 395 YHSTAHLLSDGRVLVGGSNP 414 (526)
Q Consensus 395 yhs~a~LlpdG~V~v~GG~~ 414 (526)
..-.++..+||+.+++|+..
T Consensus 336 ~~v~~~~~~~~~~l~s~~~d 355 (420)
T 3vl1_A 336 TPINNVYFAAGALFVSSGFD 355 (420)
T ss_dssp SCEEEEEEETTEEEEEETTT
T ss_pred CCceEEEeCCCCEEEEecCC
Confidence 11123456799999998853
No 35
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.38 E-value=0.026 Score=57.42 Aligned_cols=133 Identities=12% Similarity=0.082 Sum_probs=72.0
Q ss_pred eEEEEeCCCCcEEeCccC-----CccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCC-cccccce
Q 043369 86 HAVEFDPITRKVRPLTIQ-----TDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLI-SPRWYAS 159 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~-----~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~-~~R~y~s 159 (526)
...+||+.+++....... +.......+..++|++++.|+.. ..+.+||.. +.+.... +. ....-.+
T Consensus 145 ~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d---~~v~~~d~~-~~~~~~~----~~~~~~~~~~ 216 (433)
T 3bws_A 145 GMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQA---NAVHVFDLK-TLAYKAT----VDLTGKWSKI 216 (433)
T ss_dssp SEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGG---TEEEEEETT-TCCEEEE----EECSSSSEEE
T ss_pred eEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCC---CEEEEEECC-CceEEEE----EcCCCCCeeE
Confidence 367899998887653211 22122223445689999988752 578999987 5443221 11 1122223
Q ss_pred eEEecCCcEEEEcCccCCeEEEE-cCCCCCCCccee-ecCCccccCCCCCCCCCCcce-EEEecCCcEEEEEcc------
Q 043369 160 NQILPNGKIIVVGGRFQFTYEFI-PRTSDSDRKILY-QLPFLKETMHSPKIPNNLYPF-LHLSTDGNLFIFAND------ 230 (526)
Q Consensus 160 ~~~L~dG~v~viGG~~~~~~E~y-P~~~~~~~~~w~-~~p~l~~~~~~~~~~~~~yp~-~~~~~dG~Iy~~Gg~------ 230 (526)
++.-+||+.+++.+.....+.+| +.+. +.. .++.. ..+. +...++|+.+++++.
T Consensus 217 ~~~~~~~~~l~~~~~~~~~i~~~d~~~~-----~~~~~~~~~------------~~~~~~~~~~~g~~l~~~~~~~~~~~ 279 (433)
T 3bws_A 217 LLYDPIRDLVYCSNWISEDISVIDRKTK-----LEIRKTDKI------------GLPRGLLLSKDGKELYIAQFSASNQE 279 (433)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTTT-----EEEEECCCC------------SEEEEEEECTTSSEEEEEEEESCTTC
T ss_pred EEEcCCCCEEEEEecCCCcEEEEECCCC-----cEEEEecCC------------CCceEEEEcCCCCEEEEEECCCCccc
Confidence 44455776554444333467777 5543 221 11110 1122 234568876666653
Q ss_pred ----ceEEEeccCCeEE
Q 043369 231 ----RAILLDYVNNRVM 243 (526)
Q Consensus 231 ----~~~~yDp~t~~w~ 243 (526)
...+||..+++..
T Consensus 280 ~~dg~i~~~d~~~~~~~ 296 (433)
T 3bws_A 280 SGGGRLGIYSMDKEKLI 296 (433)
T ss_dssp SCCEEEEEEETTTTEEE
T ss_pred cCCCeEEEEECCCCcEE
Confidence 4568999887754
No 36
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.37 E-value=0.024 Score=57.53 Aligned_cols=252 Identities=13% Similarity=0.087 Sum_probs=129.9
Q ss_pred eEEEEeCCCCcEEeCccC-CccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEec
Q 043369 86 HAVEFDPITRKVRPLTIQ-TDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILP 164 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~-~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~ 164 (526)
...+||..+++....... +..........++|+.+++|+.. ..+.+||.. +.+.... +......-.....
T Consensus 114 ~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~d---g~i~iwd~~-~~~~~~~----~~~~~~~v~~~~~- 184 (401)
T 4aez_A 114 NVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGN---GLVDIYDVE-SQTKLRT----MAGHQARVGCLSW- 184 (401)
T ss_dssp EEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETT---SCEEEEETT-TCCEEEE----ECCCSSCEEEEEE-
T ss_pred eEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCC---CeEEEEECc-CCeEEEE----ecCCCCceEEEEE-
Confidence 578899988887654433 23223334556799999998763 468899987 5543222 2222222233344
Q ss_pred CCcEEEEcCccCCeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEcc--ceEEEeccCCe
Q 043369 165 NGKIIVVGGRFQFTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFAND--RAILLDYVNNR 241 (526)
Q Consensus 165 dG~v~viGG~~~~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~--~~~~yDp~t~~ 241 (526)
++++++.|+.++ .+.+| ..... .....+.. .. .... .+...++|++++.|+. ...+||..+.+
T Consensus 185 ~~~~l~~~~~dg-~i~i~d~~~~~---~~~~~~~~--~~-------~~v~-~~~~~~~~~~l~s~~~d~~v~iwd~~~~~ 250 (401)
T 4aez_A 185 NRHVLSSGSRSG-AIHHHDVRIAN---HQIGTLQG--HS-------SEVC-GLAWRSDGLQLASGGNDNVVQIWDARSSI 250 (401)
T ss_dssp ETTEEEEEETTS-EEEEEETTSSS---CEEEEEEC--CS-------SCEE-EEEECTTSSEEEEEETTSCEEEEETTCSS
T ss_pred CCCEEEEEcCCC-CEEEEecccCc---ceeeEEcC--CC-------CCee-EEEEcCCCCEEEEEeCCCeEEEccCCCCC
Confidence 788888888764 56666 43220 01111110 00 0011 1234568999999875 46789998766
Q ss_pred EEEeccCCCCCCCCccCCCCceeecccccccccccccCCCCCccCcEEEEEcCCCCCCCchhhhhhcccccccceEEEEe
Q 043369 242 VMKNYPVMPGGISRNYPSTGSSVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTI 321 (526)
Q Consensus 242 w~~~~p~~p~~~~r~y~~~g~~v~lp~~~~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~ 321 (526)
-...+. .. ..+ .-.....| ....++++||...+ ..+..+|+
T Consensus 251 ~~~~~~---~~---~~~-v~~~~~~p-----------------~~~~ll~~~~gs~d---------------~~i~i~d~ 291 (401)
T 4aez_A 251 PKFTKT---NH---NAA-VKAVAWCP-----------------WQSNLLATGGGTMD---------------KQIHFWNA 291 (401)
T ss_dssp EEEEEC---CC---SSC-CCEEEECT-----------------TSTTEEEEECCTTT---------------CEEEEEET
T ss_pred ccEEec---CC---cce-EEEEEECC-----------------CCCCEEEEecCCCC---------------CEEEEEEC
Confidence 442221 11 000 01111111 24567777752111 23556776
Q ss_pred ecCCCCceecccCccccccceEEeCCCcEEEEc-CcCCCCCCccCCCCCccccEEEeCCCCcEeecCCCCccccccccce
Q 043369 322 TAQNPKWEMEEMPLNRVMGDMILLPTGDVLIIN-GAAKGTAGWGAAREPVLNPVIYCPKINRFRILSPSLIPRLYHSTAH 400 (526)
Q Consensus 322 ~~~~~~W~~~~M~~~R~~~~~vvLpdG~V~vvG-G~~~g~~g~~~~~~~~~~~e~YDP~t~~Wt~~a~~~~~R~yhs~a~ 400 (526)
.. .+-.. .+.....-.+....|+|+.+++. |...| .+.+||..+.+......+......-....
T Consensus 292 ~~--~~~~~-~~~~~~~v~~~~~s~~~~~l~~~~g~~dg------------~i~v~~~~~~~~~~~~~~~~h~~~v~~~~ 356 (401)
T 4aez_A 292 AT--GARVN-TVDAGSQVTSLIWSPHSKEIMSTHGFPDN------------NLSIWSYSSSGLTKQVDIPAHDTRVLYSA 356 (401)
T ss_dssp TT--CCEEE-EEECSSCEEEEEECSSSSEEEEEECTTTC------------EEEEEEEETTEEEEEEEEECCSSCCCEEE
T ss_pred CC--CCEEE-EEeCCCcEEEEEECCCCCeEEEEeecCCC------------cEEEEecCCccceeEEEecCCCCCEEEEE
Confidence 42 21111 11111112233456899888873 32212 57889988876654432211111112234
Q ss_pred ecCCCEEEEecCCC
Q 043369 401 LLSDGRVLVGGSNP 414 (526)
Q Consensus 401 LlpdG~V~v~GG~~ 414 (526)
+-|||+.+++|+..
T Consensus 357 ~s~dg~~l~s~~~d 370 (401)
T 4aez_A 357 LSPDGRILSTAASD 370 (401)
T ss_dssp ECTTSSEEEEECTT
T ss_pred ECCCCCEEEEEeCC
Confidence 56899999998854
No 37
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.37 E-value=0.057 Score=54.49 Aligned_cols=88 Identities=10% Similarity=0.019 Sum_probs=54.1
Q ss_pred eEEEEeCCCCcEEeCccCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCC-cccccceeEEec
Q 043369 86 HAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLI-SPRWYASNQILP 164 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~-~~R~y~s~~~L~ 164 (526)
...+||..+++-...-..+..........++|+++++|+.+ ..+.+||.. +.+-.. .+. ....-.+++..+
T Consensus 120 ~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d---~~i~iwd~~-~~~~~~----~~~~h~~~v~~~~~~~ 191 (420)
T 3vl1_A 120 DIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQD---MQLKIWSVK-DGSNPR----TLIGHRATVTDIAIID 191 (420)
T ss_dssp CEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETT---SEEEEEETT-TCCCCE----EEECCSSCEEEEEEET
T ss_pred CEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCC---CeEEEEeCC-CCcCce----EEcCCCCcEEEEEEcC
Confidence 56789988776655433333333345566799999998863 579999986 433211 121 112223455566
Q ss_pred CCcEEEEcCccCCeEEEE
Q 043369 165 NGKIIVVGGRFQFTYEFI 182 (526)
Q Consensus 165 dG~v~viGG~~~~~~E~y 182 (526)
||+.++.|+.++ .+.+|
T Consensus 192 ~~~~l~s~~~d~-~v~iw 208 (420)
T 3vl1_A 192 RGRNVLSASLDG-TIRLW 208 (420)
T ss_dssp TTTEEEEEETTS-CEEEE
T ss_pred CCCEEEEEcCCC-cEEEe
Confidence 899998888764 35566
No 38
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=97.32 E-value=0.021 Score=58.56 Aligned_cols=135 Identities=13% Similarity=0.079 Sum_probs=75.3
Q ss_pred eEEEEeCCCCcEEeCccCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcc-cccceeEEec
Q 043369 86 HAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISP-RWYASNQILP 164 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~-R~y~s~~~L~ 164 (526)
...+||..+++....-..+..........++|+++++|+.+ ..+++||.. +.+-.. .+... ..-.+++..+
T Consensus 131 ~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D---~~i~iwd~~-~~~~~~----~~~~h~~~V~~v~~~p 202 (410)
T 1vyh_C 131 TIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSAD---MTIKLWDFQ-GFECIR----TMHGHDHNVSSVSIMP 202 (410)
T ss_dssp CEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETT---SCCCEEETT-SSCEEE----CCCCCSSCEEEEEECS
T ss_pred eEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCC---CeEEEEeCC-CCceeE----EEcCCCCCEEEEEEeC
Confidence 36789988876433222222222223456789999999874 467888876 433221 22211 1123445566
Q ss_pred CCcEEEEcCccCCeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEccc--eEEEeccCCe
Q 043369 165 NGKIIVVGGRFQFTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDR--AILLDYVNNR 241 (526)
Q Consensus 165 dG~v~viGG~~~~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~~--~~~yDp~t~~ 241 (526)
+|+.++.|+.++ ++.+| ..++. .-..+. ... ..--.+...++|++++.|+.+ ..+||..+.+
T Consensus 203 ~~~~l~s~s~D~-~i~~wd~~~~~----~~~~~~---~h~-------~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~ 267 (410)
T 1vyh_C 203 NGDHIVSASRDK-TIKMWEVQTGY----CVKTFT---GHR-------EWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267 (410)
T ss_dssp SSSEEEEEETTS-EEEEEETTTCC----EEEEEE---CCS-------SCEEEEEECTTSSEEEEEETTSCEEEEETTTCC
T ss_pred CCCEEEEEeCCC-eEEEEECCCCc----EEEEEe---CCC-------ccEEEEEECCCCCEEEEEcCCCeEEEEECCCCc
Confidence 889888888764 56677 44431 111111 000 001122345689999988754 6788988776
Q ss_pred EE
Q 043369 242 VM 243 (526)
Q Consensus 242 w~ 243 (526)
..
T Consensus 268 ~~ 269 (410)
T 1vyh_C 268 CK 269 (410)
T ss_dssp EE
T ss_pred ee
Confidence 54
No 39
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=97.31 E-value=0.012 Score=57.45 Aligned_cols=134 Identities=10% Similarity=0.026 Sum_probs=72.7
Q ss_pred eEEEEeCCCCcEEeCccCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCC-cccccceeEEec
Q 043369 86 HAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLI-SPRWYASNQILP 164 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~-~~R~y~s~~~L~ 164 (526)
...+||..+++-...-..+..........++++++++|+.+ ..+++||.. +.+-.. .+. ....-.+++.-+
T Consensus 36 ~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d---~~i~vwd~~-~~~~~~----~~~~h~~~v~~~~~~~ 107 (304)
T 2ynn_A 36 RVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDD---FRIRVFNYN-TGEKVV----DFEAHPDYIRSIAVHP 107 (304)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETT---SEEEEEETT-TCCEEE----EEECCSSCEEEEEECS
T ss_pred cEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCC---CEEEEEECC-CCcEEE----EEeCCCCcEEEEEEcC
Confidence 46789988775432212222222334567899999999863 579999987 543221 111 122223455567
Q ss_pred CCcEEEEcCccCCeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEec-CCcEEEEEccc--eEEEeccCC
Q 043369 165 NGKIIVVGGRFQFTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLST-DGNLFIFANDR--AILLDYVNN 240 (526)
Q Consensus 165 dG~v~viGG~~~~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~-dG~Iy~~Gg~~--~~~yDp~t~ 240 (526)
+++.++.|+.++ ++.+| ..++ +.....+.... .... .+...+ ++++++.|+.+ ..+||..+.
T Consensus 108 ~~~~l~sgs~D~-~v~lWd~~~~------~~~~~~~~~h~------~~v~-~v~~~p~~~~~l~sgs~D~~v~iwd~~~~ 173 (304)
T 2ynn_A 108 TKPYVLSGSDDL-TVKLWNWENN------WALEQTFEGHE------HFVM-CVAFNPKDPSTFASGCLDRTVKVWSLGQS 173 (304)
T ss_dssp SSSEEEEEETTS-CEEEEEGGGT------TEEEEEECCCC------SCEE-EEEECTTCTTEEEEEETTSEEEEEETTCS
T ss_pred CCCEEEEECCCC-eEEEEECCCC------cchhhhhcccC------CcEE-EEEECCCCCCEEEEEeCCCeEEEEECCCC
Confidence 889888888764 56677 3322 11111111100 0011 122234 67888888754 567887654
Q ss_pred e
Q 043369 241 R 241 (526)
Q Consensus 241 ~ 241 (526)
+
T Consensus 174 ~ 174 (304)
T 2ynn_A 174 T 174 (304)
T ss_dssp S
T ss_pred C
Confidence 3
No 40
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.28 E-value=0.086 Score=51.31 Aligned_cols=129 Identities=12% Similarity=0.063 Sum_probs=68.5
Q ss_pred eEEEEeCCCCcEEeCccCCccccccceEcCCCc-EEEEcCCCCCccEEEEEcCCCCCCc-ccccCCCCCcccccceeEEe
Q 043369 86 HAVEFDPITRKVRPLTIQTDTWCSSGALLANGV-LVQTGGYRLGERVVRYLKPCSDCDW-EEDHQNGLISPRWYASNQIL 163 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~-l~v~GG~~~g~~~v~~ydp~~t~~W-~~~~~~~m~~~R~y~s~~~L 163 (526)
...+||+.+++............ ..++-+||+ +|+.+.. ...+.+||+. +.+. ... ...-..++ .+++.-
T Consensus 21 ~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~---~~~i~~~d~~-~~~~~~~~-~~~~~~~~--~~~~~s 92 (331)
T 3u4y_A 21 RISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDF---CQTLVQIETQ-LEPPKVVA-IQEGQSSM--ADVDIT 92 (331)
T ss_dssp EEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEEST---TCEEEEEECS-SSSCEEEE-EEECSSCC--CCEEEC
T ss_pred eEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCC---CCeEEEEECC-CCceeEEe-cccCCCCc--cceEEC
Confidence 46789999888755432222212 345667887 5555542 2489999998 6654 221 01111122 224555
Q ss_pred cCCcEEEEcCccCC--eEEEE-cCCCCCCCccee-ecCCccccCCCCCCCCCCcce-EEEecCCc-EEEEEc--cc-eEE
Q 043369 164 PNGKIIVVGGRFQF--TYEFI-PRTSDSDRKILY-QLPFLKETMHSPKIPNNLYPF-LHLSTDGN-LFIFAN--DR-AIL 234 (526)
Q Consensus 164 ~dG~v~viGG~~~~--~~E~y-P~~~~~~~~~w~-~~p~l~~~~~~~~~~~~~yp~-~~~~~dG~-Iy~~Gg--~~-~~~ 234 (526)
+||+.++++..... .+.+| ..+. +.. .++.- ..|. +...+||+ ||+.+. .. ..+
T Consensus 93 ~dg~~l~~~~~~~~~~~i~v~d~~~~-----~~~~~~~~~------------~~~~~~~~spdg~~l~~~~~~~~~~i~~ 155 (331)
T 3u4y_A 93 PDDQFAVTVTGLNHPFNMQSYSFLKN-----KFISTIPIP------------YDAVGIAISPNGNGLILIDRSSANTVRR 155 (331)
T ss_dssp TTSSEEEECCCSSSSCEEEEEETTTT-----EEEEEEECC------------TTEEEEEECTTSSCEEEEEETTTTEEEE
T ss_pred CCCCEEEEecCCCCcccEEEEECCCC-----CeEEEEECC------------CCccceEECCCCCEEEEEecCCCceEEE
Confidence 68886555544433 67788 5443 221 12210 1122 34567886 776644 34 667
Q ss_pred EeccC
Q 043369 235 LDYVN 239 (526)
Q Consensus 235 yDp~t 239 (526)
||...
T Consensus 156 ~~~~~ 160 (331)
T 3u4y_A 156 FKIDA 160 (331)
T ss_dssp EEECT
T ss_pred EEECC
Confidence 77654
No 41
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.27 E-value=0.014 Score=57.84 Aligned_cols=149 Identities=11% Similarity=-0.007 Sum_probs=74.3
Q ss_pred eEEEEeCCCCcEEeCccCCcccc-ccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCc-ccccceeEEe
Q 043369 86 HAVEFDPITRKVRPLTIQTDTWC-SSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLIS-PRWYASNQIL 163 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~~~~fc-~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~-~R~y~s~~~L 163 (526)
....+|+++++++.+........ ...++-+||++|+++.. .+...+.+||.. +.++... ..+.. ...-..++.-
T Consensus 19 ~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~-~~~~~v~~~~~~-~g~~~~~--~~~~~~~~~p~~~a~s 94 (347)
T 3hfq_A 19 YQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKE-DDEGGIAAWQID-GQTAHKL--NTVVAPGTPPAYVAVD 94 (347)
T ss_dssp EEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEE-TTEEEEEEEEEE-TTEEEEE--EEEEEESCCCSEEEEE
T ss_pred EEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEec-CCCceEEEEEec-CCcEEEe--eeeecCCCCCEEEEEC
Confidence 46678998998877543211111 22345679997776532 123578889886 6665444 12111 1111234556
Q ss_pred cCCcEEEEcCccCCeEEEE-cCCCCCCCcceeecCCcccc-CCCCCCCCCCcce-EEEecCCcEEEEEc--cceEEEecc
Q 043369 164 PNGKIIVVGGRFQFTYEFI-PRTSDSDRKILYQLPFLKET-MHSPKIPNNLYPF-LHLSTDGNLFIFAN--DRAILLDYV 238 (526)
Q Consensus 164 ~dG~v~viGG~~~~~~E~y-P~~~~~~~~~w~~~p~l~~~-~~~~~~~~~~yp~-~~~~~dG~Iy~~Gg--~~~~~yDp~ 238 (526)
+||+.+++.+.....+.+| ...+ .....+...... ..........+++ +...+||++|+.+. ....+||..
T Consensus 95 pdg~~l~~~~~~~~~v~v~~~~~~----g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~ 170 (347)
T 3hfq_A 95 EARQLVYSANYHKGTAEVMKIAAD----GALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVS 170 (347)
T ss_dssp TTTTEEEEEETTTTEEEEEEECTT----SCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEEC
T ss_pred CCCCEEEEEeCCCCEEEEEEeCCC----CCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEEC
Confidence 7898555555444567777 4322 022111100000 0000000011233 34567999777653 357788887
Q ss_pred -CCeE
Q 043369 239 -NNRV 242 (526)
Q Consensus 239 -t~~w 242 (526)
+++.
T Consensus 171 ~~g~~ 175 (347)
T 3hfq_A 171 DAGQL 175 (347)
T ss_dssp TTSCE
T ss_pred CCCcE
Confidence 4443
No 42
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.27 E-value=0.19 Score=50.31 Aligned_cols=244 Identities=13% Similarity=0.161 Sum_probs=117.0
Q ss_pred eEEEEeCCCCc--EEeCccCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCC--CcccccCCCCCcccccceeE
Q 043369 86 HAVEFDPITRK--VRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDC--DWEEDHQNGLISPRWYASNQ 161 (526)
Q Consensus 86 ~~~~yDp~t~~--w~~~~~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~--~W~~~~~~~m~~~R~y~s~~ 161 (526)
....+|+++++ |+.- ...... ...++.+|+|++.... ..+..||+. +. .|......+....+...+.+
T Consensus 114 ~l~a~d~~tG~~~W~~~--~~~~~~-~~p~~~~~~v~v~~~~----g~l~~~d~~-tG~~~W~~~~~~~~~~~~~~~~~~ 185 (376)
T 3q7m_A 114 QVYALNTSDGTVAWQTK--VAGEAL-SRPVVSDGLVLIHTSN----GQLQALNEA-DGAVKWTVNLDMPSLSLRGESAPT 185 (376)
T ss_dssp EEEEEETTTCCEEEEEE--CSSCCC-SCCEEETTEEEEECTT----SEEEEEETT-TCCEEEEEECCC-----CCCCCCE
T ss_pred EEEEEECCCCCEEEEEe--CCCceE-cCCEEECCEEEEEcCC----CeEEEEECC-CCcEEEEEeCCCCceeecCCCCcE
Confidence 46779998887 4432 111111 1234457777765432 478899987 54 48654111111112223333
Q ss_pred EecCCcEEEEcCccCCeEEEE-cCCCCCCCcceee-cCCccccCCCCC-CCCCCcceEEEecCCcEEEEEc-cceEEEec
Q 043369 162 ILPNGKIIVVGGRFQFTYEFI-PRTSDSDRKILYQ-LPFLKETMHSPK-IPNNLYPFLHLSTDGNLFIFAN-DRAILLDY 237 (526)
Q Consensus 162 ~L~dG~v~viGG~~~~~~E~y-P~~~~~~~~~w~~-~p~l~~~~~~~~-~~~~~yp~~~~~~dG~Iy~~Gg-~~~~~yDp 237 (526)
+.+|.||+ |..+ ..+-.+ +.++. ..|.. .+......+... ......| ++.+|.||+.+. .....+|+
T Consensus 186 -~~~~~v~~-g~~~-g~l~~~d~~tG~---~~w~~~~~~~~~~~~~~~~~~~~~~p---~~~~~~v~~~~~~g~l~~~d~ 256 (376)
T 3q7m_A 186 -TAFGAAVV-GGDN-GRVSAVLMEQGQ---MIWQQRISQATGSTEIDRLSDVDTTP---VVVNGVVFALAYNGNLTALDL 256 (376)
T ss_dssp -EETTEEEE-CCTT-TEEEEEETTTCC---EEEEEECCC-----------CCCCCC---EEETTEEEEECTTSCEEEEET
T ss_pred -EECCEEEE-EcCC-CEEEEEECCCCc---EEEEEecccCCCCcccccccccCCCc---EEECCEEEEEecCcEEEEEEC
Confidence 33777766 4332 234455 65552 25542 211000000000 0000112 344788887653 35678999
Q ss_pred cCCeEEEeccCCCCCCCCccCCCCceeecccccccccccccCCCCCccCcEEEEEcCCCCCCCchhhhhhcccccccceE
Q 043369 238 VNNRVMKNYPVMPGGISRNYPSTGSSVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCG 317 (526)
Q Consensus 238 ~t~~w~~~~p~~p~~~~r~y~~~g~~v~lp~~~~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~ 317 (526)
++++.....+ .+. + .+..+ .+++||+..... .+.
T Consensus 257 ~tG~~~w~~~-~~~-----~--~~~~~--------------------~~~~l~~~~~~g------------------~l~ 290 (376)
T 3q7m_A 257 RSGQIMWKRE-LGS-----V--NDFIV--------------------DGNRIYLVDQND------------------RVM 290 (376)
T ss_dssp TTCCEEEEEC-CCC-----E--EEEEE--------------------ETTEEEEEETTC------------------CEE
T ss_pred CCCcEEeecc-CCC-----C--CCceE--------------------ECCEEEEEcCCC------------------eEE
Confidence 8875321121 111 1 01111 377888865321 245
Q ss_pred EEEeecCCCCceecccCccccccceEEeCCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCc--EeecCCCCccccc
Q 043369 318 RLTITAQNPKWEMEEMPLNRVMGDMILLPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINR--FRILSPSLIPRLY 395 (526)
Q Consensus 318 ~~d~~~~~~~W~~~~M~~~R~~~~~vvLpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~--Wt~~a~~~~~R~y 395 (526)
++|+.+....|+...+... .....+ +.+|+||+... + | .+.+||+++.+ |+.-.. .....
T Consensus 291 ~~d~~tG~~~w~~~~~~~~-~~~~~~-~~~~~l~v~~~-~-g------------~l~~~d~~tG~~~~~~~~~--~~~~~ 352 (376)
T 3q7m_A 291 ALTIDGGVTLWTQSDLLHR-LLTSPV-LYNGNLVVGDS-E-G------------YLHWINVEDGRFVAQQKVD--SSGFQ 352 (376)
T ss_dssp EEETTTCCEEEEECTTTTS-CCCCCE-EETTEEEEECT-T-S------------EEEEEETTTCCEEEEEECC--TTCBC
T ss_pred EEECCCCcEEEeecccCCC-cccCCE-EECCEEEEEeC-C-C------------eEEEEECCCCcEEEEEecC--CCcce
Confidence 7887654556876533322 222323 34888887532 1 1 46789999884 654221 11121
Q ss_pred cccceecCCCEEEEecC
Q 043369 396 HSTAHLLSDGRVLVGGS 412 (526)
Q Consensus 396 hs~a~LlpdG~V~v~GG 412 (526)
. ..+..+|+||+...
T Consensus 353 ~--~~~~~~~~l~v~~~ 367 (376)
T 3q7m_A 353 T--EPVAADGKLLIQAK 367 (376)
T ss_dssp S--CCEEETTEEEEEBT
T ss_pred e--CCEEECCEEEEEeC
Confidence 2 23345999998754
No 43
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=97.23 E-value=0.042 Score=54.96 Aligned_cols=134 Identities=7% Similarity=0.038 Sum_probs=74.5
Q ss_pred eEEEEeCCCCcEEeCcc--CCccccccceEcC-CCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEE
Q 043369 86 HAVEFDPITRKVRPLTI--QTDTWCSSGALLA-NGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQI 162 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~--~~~~fc~~~~~l~-~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~ 162 (526)
...+||..+.+...... .+..........+ ++.++++|+.+ ..+.+||.. +....... ..-....+-.+++.
T Consensus 97 ~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d---~~i~iwd~~-~~~~~~~~-~~~~~~~~v~~~~~ 171 (383)
T 3ei3_B 97 DIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR---GATTLRDFS-GSVIQVFA-KTDSWDYWYCCVDV 171 (383)
T ss_dssp CEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETT---TEEEEEETT-SCEEEEEE-CCCCSSCCEEEEEE
T ss_pred eEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCC---CEEEEEECC-CCceEEEe-ccCCCCCCeEEEEE
Confidence 36789998877665432 1322222334556 67888888763 578899987 55444331 11111122345566
Q ss_pred ecCCcEEEEcCccCCeEEEEcCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCc-EEEEEccc--eEEEeccC
Q 043369 163 LPNGKIIVVGGRFQFTYEFIPRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGN-LFIFANDR--AILLDYVN 239 (526)
Q Consensus 163 L~dG~v~viGG~~~~~~E~yP~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~-Iy~~Gg~~--~~~yDp~t 239 (526)
-++++.++.|+.++ .+.+|..+.. ....+.. .. .... .+...++++ +++.|+.+ ..+||..+
T Consensus 172 ~~~~~~l~~~~~d~-~i~i~d~~~~----~~~~~~~--h~-------~~v~-~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 236 (383)
T 3ei3_B 172 SVSRQMLATGDSTG-RLLLLGLDGH----EIFKEKL--HK-------AKVT-HAEFNPRCDWLMATSSVDATVKLWDLRN 236 (383)
T ss_dssp ETTTTEEEEEETTS-EEEEEETTSC----EEEEEEC--SS-------SCEE-EEEECSSCTTEEEEEETTSEEEEEEGGG
T ss_pred CCCCCEEEEECCCC-CEEEEECCCC----EEEEecc--CC-------CcEE-EEEECCCCCCEEEEEeCCCEEEEEeCCC
Confidence 67899999988764 5667722220 1111110 00 0011 123456787 88888754 67889887
No 44
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.22 E-value=0.15 Score=48.05 Aligned_cols=155 Identities=14% Similarity=0.067 Sum_probs=80.3
Q ss_pred ceeEEEEecCCeEEE-EecccCCCCCccCCCCccccCccccCCCCcceEEEEeCCCCcEEeCccCCccccccceEcCCCc
Q 043369 40 SAMHMALLPNDRIIA-FDRSHFGPSNITLPQGKCIKGVELETSDCYAHAVEFDPITRKVRPLTIQTDTWCSSGALLANGV 118 (526)
Q Consensus 40 ~~~~~a~l~~gkv~~-~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~ 118 (526)
.+..+++-++|++|+ .+... + ....||+.+.+.............+.+..++|+
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~----------~---------------~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~ 79 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMY----------G---------------RVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGT 79 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSS----------C---------------EEEEECC-----EECCCCSCCSCCCEEECTTCC
T ss_pred CccceEECCCCCEEEEccCCC----------C---------------cEEEecCCCcccceEeeCCcCCcceeEECCCCC
Confidence 456666668999887 43321 1 355678776665544322212222344556899
Q ss_pred EEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEecCCcEEEEcCccCCeEEEE-cCCCCCCCcceeecC
Q 043369 119 LVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPNGKIIVVGGRFQFTYEFI-PRTSDSDRKILYQLP 197 (526)
Q Consensus 119 l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~dG~v~viGG~~~~~~E~y-P~~~~~~~~~w~~~p 197 (526)
+|+... . ..+.+||+. +...... .......-.+.+.-++|++|+....+ ..+.+| +.+. ......
T Consensus 80 l~v~~~-~---~~i~~~d~~-~~~~~~~---~~~~~~~p~~i~~~~~g~l~v~~~~~-~~i~~~~~~~~-----~~~~~~ 145 (270)
T 1rwi_B 80 VYVTDF-N---NRVVTLAAG-SNNQTVL---PFDGLNYPEGLAVDTQGAVYVADRGN-NRVVKLAAGSK-----TQTVLP 145 (270)
T ss_dssp EEEEET-T---TEEEEECTT-CSCCEEC---CCCSCSSEEEEEECTTCCEEEEEGGG-TEEEEECTTCC-----SCEECC
T ss_pred EEEEcC-C---CEEEEEeCC-CceEeee---ecCCcCCCcceEECCCCCEEEEECCC-CEEEEEECCCc-----eeEeec
Confidence 998865 2 478899997 5543332 11111112244555689999875433 245555 3222 111111
Q ss_pred CccccCCCCCCCCCCcce-EEEecCCcEEEEEc--cceEEEeccCCeEE
Q 043369 198 FLKETMHSPKIPNNLYPF-LHLSTDGNLFIFAN--DRAILLDYVNNRVM 243 (526)
Q Consensus 198 ~l~~~~~~~~~~~~~yp~-~~~~~dG~Iy~~Gg--~~~~~yDp~t~~w~ 243 (526)
.. . ...|. ...-++|+||+... ....+||+.+....
T Consensus 146 ~~-~---------~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~ 184 (270)
T 1rwi_B 146 FT-G---------LNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQV 184 (270)
T ss_dssp CC-S---------CCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEE
T ss_pred cc-c---------CCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceE
Confidence 00 0 01233 23446899998764 35778998876643
No 45
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=97.16 E-value=0.077 Score=53.78 Aligned_cols=108 Identities=18% Similarity=0.154 Sum_probs=63.3
Q ss_pred ceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCC-cccccceeEEecCCcEEEEcCccCCeEEEE-cCCCCC
Q 043369 111 GALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLI-SPRWYASNQILPNGKIIVVGGRFQFTYEFI-PRTSDS 188 (526)
Q Consensus 111 ~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~-~~R~y~s~~~L~dG~v~viGG~~~~~~E~y-P~~~~~ 188 (526)
...-+||+.+++|+.+ ..+++||.. +.+-... +. ....-.+++..++|+.++.|+.++ ++.+| ..+.
T Consensus 129 v~~s~dg~~l~s~~~d---~~i~iwd~~-~~~~~~~----~~~h~~~v~~~~~~p~~~~l~s~s~d~-~v~iwd~~~~-- 197 (393)
T 1erj_A 129 VCFSPDGKFLATGAED---RLIRIWDIE-NRKIVMI----LQGHEQDIYSLDYFPSGDKLVSGSGDR-TVRIWDLRTG-- 197 (393)
T ss_dssp EEECTTSSEEEEEETT---SCEEEEETT-TTEEEEE----ECCCSSCEEEEEECTTSSEEEEEETTS-EEEEEETTTT--
T ss_pred EEECCCCCEEEEEcCC---CeEEEEECC-CCcEEEE----EccCCCCEEEEEEcCCCCEEEEecCCC-cEEEEECCCC--
Confidence 4456799999999863 578999987 5433221 11 112223445556899888887664 56777 4443
Q ss_pred CCccee-ecCCccccCCCCCCCCCCcceEEEec-CCcEEEEEccc--eEEEeccCCeEE
Q 043369 189 DRKILY-QLPFLKETMHSPKIPNNLYPFLHLST-DGNLFIFANDR--AILLDYVNNRVM 243 (526)
Q Consensus 189 ~~~~w~-~~p~l~~~~~~~~~~~~~yp~~~~~~-dG~Iy~~Gg~~--~~~yDp~t~~w~ 243 (526)
... .+.. . + ... .+...+ +|++++.|+.+ ..+||..+++..
T Consensus 198 ---~~~~~~~~---~-~------~v~-~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~ 242 (393)
T 1erj_A 198 ---QCSLTLSI---E-D------GVT-TVAVSPGDGKYIAAGSLDRAVRVWDSETGFLV 242 (393)
T ss_dssp ---EEEEEEEC---S-S------CEE-EEEECSTTCCEEEEEETTSCEEEEETTTCCEE
T ss_pred ---eeEEEEEc---C-C------CcE-EEEEECCCCCEEEEEcCCCcEEEEECCCCcEE
Confidence 211 1111 0 0 111 123344 88999988754 678999887654
No 46
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=97.13 E-value=0.22 Score=50.02 Aligned_cols=262 Identities=17% Similarity=0.177 Sum_probs=122.8
Q ss_pred eEEEEeCCCCcEEeCccCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccc--c-CCCCCcccccc-eeE
Q 043369 86 HAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEED--H-QNGLISPRWYA-SNQ 161 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~--~-~~~m~~~R~y~-s~~ 161 (526)
...+||..+.+-...-..+...-...+..++|+.+++||.+ ..+.+||.. +..-... + ...+.....+. ++.
T Consensus 89 ~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d---~~v~iw~~~-~~~~~~~~~~~~~~~~gh~~~v~~~~ 164 (380)
T 3iz6_a 89 RLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLD---SACSIFNLS-SQADRDGNMPVSRVLTGHKGYASSCQ 164 (380)
T ss_dssp EEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSS---SCCEEEECC-CCSSCCCSSTTCCBCCCCSSCCCCCB
T ss_pred eEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCC---CcEEEEECC-CCccccCCccceeeccCCCcceEEEE
Confidence 46789988876543322333333345677899999999974 467778765 3221110 0 00111111111 122
Q ss_pred EecC-CcEEEEcCccCCeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEccc--eEEEec
Q 043369 162 ILPN-GKIIVVGGRFQFTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDR--AILLDY 237 (526)
Q Consensus 162 ~L~d-G~v~viGG~~~~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~~--~~~yDp 237 (526)
..++ +..++.|+.++ ++.+| ..++. .-..+.......+. .......+.-.++++++.|+.+ ..+||.
T Consensus 165 ~~~~~~~~l~s~s~D~-~i~~wd~~~~~----~~~~~~~~~~~~h~----~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~ 235 (380)
T 3iz6_a 165 YVPDQETRLITGSGDQ-TCVLWDVTTGQ----RISIFGSEFPSGHT----ADVLSLSINSLNANMFISGSCDTTVRLWDL 235 (380)
T ss_dssp CCSSSSSCEEEECTTS-CEEEECTTTCC----EEEEECCCSSSSCC----SCEEEEEECSSSCCEEEEEETTSCEEEEET
T ss_pred EecCCCCEEEEECCCC-cEEEEEcCCCc----EEEEeecccCCCCc----cCeEEEEeecCCCCEEEEEECCCeEEEEEC
Confidence 2333 44566666553 56777 44431 11111100000000 0111111112378999998854 678887
Q ss_pred cCC-eEEEeccCCCCCCCCccCCCCceeecccccccccccccCCCCCccCcEEEEEcCCCCCCCchhhhhhcccccccce
Q 043369 238 VNN-RVMKNYPVMPGGISRNYPSTGSSVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSC 316 (526)
Q Consensus 238 ~t~-~w~~~~p~~p~~~~r~y~~~g~~v~lp~~~~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~ 316 (526)
... +-.+.+ ... ..+ --..... .+++.++.|+.+. ++
T Consensus 236 ~~~~~~~~~~---~~h---~~~-v~~v~~~------------------p~~~~l~s~s~D~-----------------~i 273 (380)
T 3iz6_a 236 RITSRAVRTY---HGH---EGD-INSVKFF------------------PDGQRFGTGSDDG-----------------TC 273 (380)
T ss_dssp TTTCCCCEEE---CCC---SSC-CCEEEEC------------------TTSSEEEEECSSS-----------------CE
T ss_pred CCCCcceEEE---CCc---CCC-eEEEEEe------------------cCCCeEEEEcCCC-----------------eE
Confidence 632 211111 111 000 0011111 2677888888652 34
Q ss_pred EEEEeecCCC--Cceeccc--Cccc-cccceEEeCCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCcEe-ecCCCC
Q 043369 317 GRLTITAQNP--KWEMEEM--PLNR-VMGDMILLPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINRFR-ILSPSL 390 (526)
Q Consensus 317 ~~~d~~~~~~--~W~~~~M--~~~R-~~~~~vvLpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~Wt-~~a~~~ 390 (526)
..+|+..... .+...+. .... .-.....-|+|++++.|+.+ | .+.+||..+.+-. .+..+.
T Consensus 274 ~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d-g------------~i~vwd~~~~~~~~~~~~~~ 340 (380)
T 3iz6_a 274 RLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSN-G------------DCYVWDTLLAEMVLNLGTLQ 340 (380)
T ss_dssp EEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTT-S------------CEEEEETTTCCEEEEECCSC
T ss_pred EEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECC-C------------CEEEEECCCCceEEEEeccc
Confidence 4566542100 0111100 0000 11223456899999998764 2 5789998777532 222211
Q ss_pred ccc-cccccceecCCCEEEEecCCCC
Q 043369 391 IPR-LYHSTAHLLSDGRVLVGGSNPN 415 (526)
Q Consensus 391 ~~R-~yhs~a~LlpdG~V~v~GG~~~ 415 (526)
... ..-.+...-|||+.++.||...
T Consensus 341 ~~h~~~v~~l~~s~dg~~l~sgs~D~ 366 (380)
T 3iz6_a 341 NSHEGRISCLGLSSDGSALCTGSWDK 366 (380)
T ss_dssp SSCCCCCCEEEECSSSSEEEEECTTS
T ss_pred CCCCCceEEEEECCCCCEEEEeeCCC
Confidence 111 0112234568999999999643
No 47
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=97.12 E-value=0.073 Score=54.71 Aligned_cols=91 Identities=7% Similarity=0.009 Sum_probs=51.9
Q ss_pred eEEEEeCCCCcEEeCcc--CCccccccceEcC-CCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEE
Q 043369 86 HAVEFDPITRKVRPLTI--QTDTWCSSGALLA-NGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQI 162 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~--~~~~fc~~~~~l~-~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~ 162 (526)
...+||..+++...... .+........+.+ |+.+++.|+.+ ..+++||.. +...... ...-...-+..++..
T Consensus 143 ~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D---~~v~iwd~~-~~~~~~~-~~~~~~~~~~~~~~~ 217 (435)
T 4e54_B 143 DIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSME---GTTRLQDFK-GNILRVF-ASSDTINIWFCSLDV 217 (435)
T ss_dssp CEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSS---SCEEEEETT-SCEEEEE-ECCSSCSCCCCCEEE
T ss_pred EEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCC---CEEEEeecc-CCceeEE-eccCCCCccEEEEEE
Confidence 36788887765433221 1222222223343 78899998863 468899987 5543322 011122233445556
Q ss_pred ecCCcEEEEcCccCCeEEEE
Q 043369 163 LPNGKIIVVGGRFQFTYEFI 182 (526)
Q Consensus 163 L~dG~v~viGG~~~~~~E~y 182 (526)
-+||++++.|+.++ .+.+|
T Consensus 218 ~~~~~~l~~g~~dg-~i~~w 236 (435)
T 4e54_B 218 SASSRMVVTGDNVG-NVILL 236 (435)
T ss_dssp ETTTTEEEEECSSS-BEEEE
T ss_pred CCCCCEEEEEeCCC-cEeee
Confidence 67999999998765 45666
No 48
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.12 E-value=0.094 Score=51.96 Aligned_cols=218 Identities=9% Similarity=0.013 Sum_probs=111.3
Q ss_pred ccEEEEEcCCCCCCccccc---CCCCCcccccceeEEecCCcEEEEcCccCCeEEEE-cCCCCCCCcce-eecCCccccC
Q 043369 129 ERVVRYLKPCSDCDWEEDH---QNGLISPRWYASNQILPNGKIIVVGGRFQFTYEFI-PRTSDSDRKIL-YQLPFLKETM 203 (526)
Q Consensus 129 ~~~v~~ydp~~t~~W~~~~---~~~m~~~R~y~s~~~L~dG~v~viGG~~~~~~E~y-P~~~~~~~~~w-~~~p~l~~~~ 203 (526)
..++.+|||. +.++...- .........-... ++.++++|++... ...+.++ +.+. +. ..++..
T Consensus 16 ~~~l~~~d~~-t~~~~~~i~~~~n~~~lg~~~~~i-~~~~~~lyv~~~~-~~~v~viD~~t~-----~~~~~i~~~---- 83 (328)
T 3dsm_A 16 NATLSYYDPA-TCEVENEVFYRANGFKLGDVAQSM-VIRDGIGWIVVNN-SHVIFAIDINTF-----KEVGRITGF---- 83 (328)
T ss_dssp CBEEEEEETT-TTEEECSHHHHHHSSCCBSCEEEE-EEETTEEEEEEGG-GTEEEEEETTTC-----CEEEEEECC----
T ss_pred CceEEEEECC-CCEEhhhhHhhhcCcccCccceEE-EEECCEEEEEEcC-CCEEEEEECccc-----EEEEEcCCC----
Confidence 4689999998 77654310 0011122211233 3458899998753 3467788 6654 22 122211
Q ss_pred CCCCCCCCCcceEEEe-cCCcEEEEE--ccceEEEeccCCeEEEeccCCCCCCCCccCCCCceeecccccccccccccCC
Q 043369 204 HSPKIPNNLYPFLHLS-TDGNLFIFA--NDRAILLDYVNNRVMKNYPVMPGGISRNYPSTGSSVLLPVNLSSINVHINNN 280 (526)
Q Consensus 204 ~~~~~~~~~yp~~~~~-~dG~Iy~~G--g~~~~~yDp~t~~w~~~~p~~p~~~~r~y~~~g~~v~lp~~~~~~~~~~~~~ 280 (526)
..|+..+. ++|++|+.. +....++|+++++....++.-........| .+.++
T Consensus 84 --------~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p-~~i~~---------------- 138 (328)
T 3dsm_A 84 --------TSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGST-EQMVQ---------------- 138 (328)
T ss_dssp --------SSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBC-CCEEE----------------
T ss_pred --------CCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCc-ceEEE----------------
Confidence 12455555 799999987 356788999998865444321110000122 22222
Q ss_pred CCCccCcEEEEEcCCCCCCCchhhhhhcccccccceEEEEeecCCCCceec-cc-CccccccceEEeCCCcEEEEcCcCC
Q 043369 281 NKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTITAQNPKWEME-EM-PLNRVMGDMILLPTGDVLIINGAAK 358 (526)
Q Consensus 281 ~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M-~~~R~~~~~vvLpdG~V~vvGG~~~ 358 (526)
.++++|+..-.. .+.+.+||+.. .+.... +. ..+ ....+-+||++|+..-...
T Consensus 139 ----~~~~lyv~~~~~----------------~~~v~viD~~t--~~~~~~i~~g~~p---~~i~~~~dG~l~v~~~~~~ 193 (328)
T 3dsm_A 139 ----YGKYVYVNCWSY----------------QNRILKIDTET--DKVVDELTIGIQP---TSLVMDKYNKMWTITDGGY 193 (328)
T ss_dssp ----ETTEEEEEECTT----------------CCEEEEEETTT--TEEEEEEECSSCB---CCCEECTTSEEEEEBCCBC
T ss_pred ----ECCEEEEEcCCC----------------CCEEEEEECCC--CeEEEEEEcCCCc---cceEEcCCCCEEEEECCCc
Confidence 378999885210 12466788752 333221 21 122 2345568999999864321
Q ss_pred CCCCccCCCCCccccEEEeCCCCcEeecCCCCccccccccceecCC-CEEEEecC
Q 043369 359 GTAGWGAAREPVLNPVIYCPKINRFRILSPSLIPRLYHSTAHLLSD-GRVLVGGS 412 (526)
Q Consensus 359 g~~g~~~~~~~~~~~e~YDP~t~~Wt~~a~~~~~R~yhs~a~Llpd-G~V~v~GG 412 (526)
....|. .....+.++|+++.+....-..+....-++ ..+-|| +++|++.+
T Consensus 194 ~~~~~~---~~~~~v~~id~~t~~v~~~~~~~~g~~p~~-la~~~d~~~lyv~~~ 244 (328)
T 3dsm_A 194 EGSPYG---YEAPSLYRIDAETFTVEKQFKFKLGDWPSE-VQLNGTRDTLYWINN 244 (328)
T ss_dssp TTCSSC---BCCCEEEEEETTTTEEEEEEECCTTCCCEE-EEECTTSCEEEEESS
T ss_pred cCCccc---cCCceEEEEECCCCeEEEEEecCCCCCcee-EEEecCCCEEEEEcc
Confidence 110010 002367899999987653212211111123 334454 55666543
No 49
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=97.07 E-value=0.04 Score=54.87 Aligned_cols=157 Identities=11% Similarity=0.014 Sum_probs=88.7
Q ss_pred EEEecCCeEEEEecccCCCCCccCCCCccccCccccCCCCcceEEEEeCCCCcEEeCc---cCCccccccceEcCCCcEE
Q 043369 44 MALLPNDRIIAFDRSHFGPSNITLPQGKCIKGVELETSDCYAHAVEFDPITRKVRPLT---IQTDTWCSSGALLANGVLV 120 (526)
Q Consensus 44 ~a~l~~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~yDp~t~~w~~~~---~~~~~fc~~~~~l~~G~l~ 120 (526)
++.-|+|++++.++.+ + ...+||..++++.... ..+.........-++|+.+
T Consensus 22 l~~sp~g~~las~~~D----------~---------------~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l 76 (345)
T 3fm0_A 22 LAWNPAGTLLASCGGD----------R---------------RIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYL 76 (345)
T ss_dssp EEECTTSSCEEEEETT----------S---------------CEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEE
T ss_pred EEECCCCCEEEEEcCC----------C---------------eEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEE
Confidence 3445788877776643 2 3667888888765322 2233333334556799999
Q ss_pred EEcCCCCCccEEEEEcCCCCCCcccccCCCCCc-ccccceeEEecCCcEEEEcCccCCeEEEE-cCCCCCCCcceeecCC
Q 043369 121 QTGGYRLGERVVRYLKPCSDCDWEEDHQNGLIS-PRWYASNQILPNGKIIVVGGRFQFTYEFI-PRTSDSDRKILYQLPF 198 (526)
Q Consensus 121 v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~-~R~y~s~~~L~dG~v~viGG~~~~~~E~y-P~~~~~~~~~w~~~p~ 198 (526)
++|+.+ ..+.+||.. +..+... ..+.. ...-.+++--+||+.++.|+.++ ++.+| ..+. ........
T Consensus 77 ~s~s~D---~~v~iw~~~-~~~~~~~--~~~~~h~~~v~~v~~sp~~~~l~s~s~D~-~v~iwd~~~~----~~~~~~~~ 145 (345)
T 3fm0_A 77 ASASFD---ATTCIWKKN-QDDFECV--TTLEGHENEVKSVAWAPSGNLLATCSRDK-SVWVWEVDEE----DEYECVSV 145 (345)
T ss_dssp EEEETT---SCEEEEEEC-CC-EEEE--EEECCCSSCEEEEEECTTSSEEEEEETTS-CEEEEEECTT----SCEEEEEE
T ss_pred EEEECC---CcEEEEEcc-CCCeEEE--EEccCCCCCceEEEEeCCCCEEEEEECCC-eEEEEECCCC----CCeEEEEE
Confidence 999874 467788776 5544332 11221 11223445556899999998775 46666 4332 12222211
Q ss_pred ccccCCCCCCCCCCcceEEEecCCcEEEEEccc--eEEEeccCCeEE
Q 043369 199 LKETMHSPKIPNNLYPFLHLSTDGNLFIFANDR--AILLDYVNNRVM 243 (526)
Q Consensus 199 l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~~--~~~yDp~t~~w~ 243 (526)
+.... .... .+...++|++++.|+.+ ..+||..+++|.
T Consensus 146 ~~~h~------~~v~-~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~ 185 (345)
T 3fm0_A 146 LNSHT------QDVK-HVVWHPSQELLASASYDDTVKLYREEEDDWV 185 (345)
T ss_dssp ECCCC------SCEE-EEEECSSSSCEEEEETTSCEEEEEEETTEEE
T ss_pred ecCcC------CCeE-EEEECCCCCEEEEEeCCCcEEEEEecCCCEE
Confidence 11100 0011 22345689988888754 678999888765
No 50
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.05 E-value=0.19 Score=49.47 Aligned_cols=134 Identities=18% Similarity=0.076 Sum_probs=77.4
Q ss_pred eEEEEeCCCCcEEeCccCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCC-cccccceeEEec
Q 043369 86 HAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLI-SPRWYASNQILP 164 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~-~~R~y~s~~~L~ 164 (526)
...+||..+++-...-..+.......+.-++|+.+++|+.. ..+.+||.. +.+-.. .+. ....-.+++.-+
T Consensus 103 ~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~d---g~v~i~~~~-~~~~~~----~~~~~~~~v~~~~~sp 174 (321)
T 3ow8_A 103 HIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHV---GKVNIFGVE-SGKKEY----SLDTRGKFILSIAYSP 174 (321)
T ss_dssp EEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTT---SEEEEEETT-TCSEEE----EEECSSSCEEEEEECT
T ss_pred cEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCC---CcEEEEEcC-CCceeE----EecCCCceEEEEEECC
Confidence 56789988876433211222222234567899999999863 578899876 433211 111 122233455567
Q ss_pred CCcEEEEcCccCCeEEEE-cCCCCCCCcce-eecCCccccCCCCCCCCCCcceEEEecCCcEEEEEccc--eEEEeccCC
Q 043369 165 NGKIIVVGGRFQFTYEFI-PRTSDSDRKIL-YQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDR--AILLDYVNN 240 (526)
Q Consensus 165 dG~v~viGG~~~~~~E~y-P~~~~~~~~~w-~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~~--~~~yDp~t~ 240 (526)
||+.++.|+.++ .+.+| ..+. +. ..+..- . .... .+...+||++++.|+.+ ..+||..+.
T Consensus 175 dg~~lasg~~dg-~i~iwd~~~~-----~~~~~~~~h--~-------~~v~-~l~~spd~~~l~s~s~dg~i~iwd~~~~ 238 (321)
T 3ow8_A 175 DGKYLASGAIDG-IINIFDIATG-----KLLHTLEGH--A-------MPIR-SLTFSPDSQLLVTASDDGYIKIYDVQHA 238 (321)
T ss_dssp TSSEEEEEETTS-CEEEEETTTT-----EEEEEECCC--S-------SCCC-EEEECTTSCEEEEECTTSCEEEEETTTC
T ss_pred CCCEEEEEcCCC-eEEEEECCCC-----cEEEEEccc--C-------Ccee-EEEEcCCCCEEEEEcCCCeEEEEECCCc
Confidence 999999988765 46777 4443 21 111110 0 0111 23346799999998854 678998877
Q ss_pred eEE
Q 043369 241 RVM 243 (526)
Q Consensus 241 ~w~ 243 (526)
+..
T Consensus 239 ~~~ 241 (321)
T 3ow8_A 239 NLA 241 (321)
T ss_dssp CEE
T ss_pred cee
Confidence 654
No 51
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=97.01 E-value=0.18 Score=49.90 Aligned_cols=93 Identities=16% Similarity=-0.041 Sum_probs=48.3
Q ss_pred eEEEEeCCCCcEEeCccCCccccccceEcCCCcEEEEcCCC-CCccEEEEE--cCCCCCCcccccCCCCCcccccceeEE
Q 043369 86 HAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYR-LGERVVRYL--KPCSDCDWEEDHQNGLISPRWYASNQI 162 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~v~GG~~-~g~~~v~~y--dp~~t~~W~~~~~~~m~~~R~y~s~~~ 162 (526)
+...+|+++++++.+.......-...+.-+||+.+.++... +....+.+| |+. +.+.... ......-..+....
T Consensus 30 ~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~-~g~~~~~--~~~~~~~~~p~~~~ 106 (361)
T 3scy_A 30 YTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKE-KGTLHLL--NTQKTMGADPCYLT 106 (361)
T ss_dssp EEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETT-TTEEEEE--EEEECSSSCEEEEE
T ss_pred EEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCC-CCcEEEe--eEeccCCCCcEEEE
Confidence 45667899998887654321111223556789855555442 122355555 554 4555443 22221222344444
Q ss_pred ecCCcEEEEcCccCCeEEEE
Q 043369 163 LPNGKIIVVGGRFQFTYEFI 182 (526)
Q Consensus 163 L~dG~v~viGG~~~~~~E~y 182 (526)
+ ||+.+++.......+.+|
T Consensus 107 ~-dg~~l~~~~~~~~~v~~~ 125 (361)
T 3scy_A 107 T-NGKNIVTANYSGGSITVF 125 (361)
T ss_dssp E-CSSEEEEEETTTTEEEEE
T ss_pred E-CCCEEEEEECCCCEEEEE
Confidence 5 777555555444567777
No 52
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.00 E-value=0.24 Score=46.54 Aligned_cols=228 Identities=16% Similarity=0.115 Sum_probs=111.2
Q ss_pred eEcCCCcEEE-EcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEecCCcEEEEcCccCCeEEEE-cCCCCCC
Q 043369 112 ALLANGVLVQ-TGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPNGKIIVVGGRFQFTYEFI-PRTSDSD 189 (526)
Q Consensus 112 ~~l~~G~l~v-~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~dG~v~viGG~~~~~~E~y-P~~~~~~ 189 (526)
+.-++|++|+ .... ...+.+||+. +..........+..+ .+++.-++|++|+... ...+.+| +...
T Consensus 30 ~~~~~g~l~v~~~~~---~~~i~~~~~~-~~~~~~~~~~~~~~p---~~i~~~~~g~l~v~~~--~~~i~~~d~~~~--- 97 (270)
T 1rwi_B 30 AVDSAGNVYVTSEGM---YGRVVKLATG-STGTTVLPFNGLYQP---QGLAVDGAGTVYVTDF--NNRVVTLAAGSN--- 97 (270)
T ss_dssp EECTTCCEEEEECSS---SCEEEEECC------EECCCCSCCSC---CCEEECTTCCEEEEET--TTEEEEECTTCS---
T ss_pred EECCCCCEEEEccCC---CCcEEEecCC-CcccceEeeCCcCCc---ceeEECCCCCEEEEcC--CCEEEEEeCCCc---
Confidence 4456899998 5332 2578889987 554433200122222 2455556899998876 3356666 5443
Q ss_pred CcceeecCCccccCCCCCCCCCCcceE-EEecCCcEEEEEc--cceEEEeccCCeEEEeccCCCCCCCCccCCCCceeec
Q 043369 190 RKILYQLPFLKETMHSPKIPNNLYPFL-HLSTDGNLFIFAN--DRAILLDYVNNRVMKNYPVMPGGISRNYPSTGSSVLL 266 (526)
Q Consensus 190 ~~~w~~~p~l~~~~~~~~~~~~~yp~~-~~~~dG~Iy~~Gg--~~~~~yDp~t~~w~~~~p~~p~~~~r~y~~~g~~v~l 266 (526)
........ ....|.. ..-++|+||+... ....+||..+..... .. ... -..| .+.++ -
T Consensus 98 --~~~~~~~~----------~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~-~~--~~~--~~~p-~~i~~-~ 158 (270)
T 1rwi_B 98 --NQTVLPFD----------GLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTV-LP--FTG--LNDP-DGVAV-D 158 (270)
T ss_dssp --CCEECCCC----------SCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEE-CC--CCS--CCSC-CCEEE-C
T ss_pred --eEeeeecC----------CcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEe-ec--ccc--CCCc-eeEEE-e
Confidence 11111110 0113443 3345899998753 346677776654331 11 111 0111 12221 0
Q ss_pred ccccccccccccCCCCCccCcEEEEEcCCCCCCCchhhhhhcccccccceEEEEeecCCCCceec--ccCccccccceEE
Q 043369 267 PVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTITAQNPKWEME--EMPLNRVMGDMIL 344 (526)
Q Consensus 267 p~~~~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~--~M~~~R~~~~~vv 344 (526)
.+++||+..... ..+.+||+.. ....... .+..++ +.++
T Consensus 159 ------------------~~g~l~v~~~~~-----------------~~i~~~~~~~-~~~~~~~~~~~~~p~---~i~~ 199 (270)
T 1rwi_B 159 ------------------NSGNVYVTDTDN-----------------NRVVKLEAES-NNQVVLPFTDITAPW---GIAV 199 (270)
T ss_dssp ------------------TTCCEEEEEGGG-----------------TEEEEECTTT-CCEEECCCSSCCSEE---EEEE
T ss_pred ------------------CCCCEEEEECCC-----------------CEEEEEecCC-CceEeecccCCCCce---EEEE
Confidence 267788875321 2355676532 1111111 222222 3344
Q ss_pred eCCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCcEeecCCCCccccccccceecCCCEEEEecCCCCCCCCcCCCC
Q 043369 345 LPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINRFRILSPSLIPRLYHSTAHLLSDGRVLVGGSNPNVNYNFSALF 424 (526)
Q Consensus 345 LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~Wt~~a~~~~~R~yhs~a~LlpdG~V~v~GG~~~~~~~~~~~~ 424 (526)
-++|+||+..... ..+.+||+....-........ ..-++ ..+.+||++|++....
T Consensus 200 d~~g~l~v~~~~~-------------~~v~~~~~~~~~~~~~~~~~~-~~p~~-i~~~~~g~l~v~~~~~---------- 254 (270)
T 1rwi_B 200 DEAGTVYVTEHNT-------------NQVVKLLAGSTTSTVLPFTGL-NTPLA-VAVDSDRTVYVADRGN---------- 254 (270)
T ss_dssp CTTCCEEEEETTT-------------SCEEEECTTCSCCEECCCCSC-SCEEE-EEECTTCCEEEEEGGG----------
T ss_pred CCCCCEEEEECCC-------------CcEEEEcCCCCcceeeccCCC-CCcee-EEECCCCCEEEEECCC----------
Confidence 5789999976432 146789997764333221111 11122 3455899999986532
Q ss_pred CCceeeEEEcCcc
Q 043369 425 PTELSLQAFYPPY 437 (526)
Q Consensus 425 p~~~~vE~y~Ppy 437 (526)
.+|.+|..+.
T Consensus 255 ---~~v~~~~~~~ 264 (270)
T 1rwi_B 255 ---DRVVKLTSLE 264 (270)
T ss_dssp ---TEEEEECCCG
T ss_pred ---CEEEEEcCCC
Confidence 2567776654
No 53
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=96.96 E-value=0.071 Score=53.91 Aligned_cols=234 Identities=12% Similarity=0.062 Sum_probs=115.8
Q ss_pred eEcC-CCcEEEEcCCCCCccEEEEEcCCCCCCccccc---CCCCC-cccccceeEEecCC-cEEEEcCccCCeEEEE-cC
Q 043369 112 ALLA-NGVLVQTGGYRLGERVVRYLKPCSDCDWEEDH---QNGLI-SPRWYASNQILPNG-KIIVVGGRFQFTYEFI-PR 184 (526)
Q Consensus 112 ~~l~-~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~---~~~m~-~~R~y~s~~~L~dG-~v~viGG~~~~~~E~y-P~ 184 (526)
...+ ++.++++|+.+ ..+.+||.. +....... ...+. ....-.+++..++| ++++.|+.++ .+.+| ..
T Consensus 88 ~~~p~~~~~l~s~s~d---g~v~vw~~~-~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg-~i~iwd~~ 162 (402)
T 2aq5_A 88 AWCPHNDNVIASGSED---CTVMVWEIP-DGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDN-VILVWDVG 162 (402)
T ss_dssp EECTTCTTEEEEEETT---SEEEEEECC-TTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTS-CEEEEETT
T ss_pred EeCCCCCCEEEEEeCC---CeEEEEEcc-CCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCC-EEEEEECC
Confidence 3445 78999999863 478999987 55432110 01111 11222234455676 6888888764 46677 44
Q ss_pred CCCCCCccee-ecCCccccCCCCCCCCCCcceEEEecCCcEEEEEccc--eEEEeccCCeEEEeccCCCCCCCCccCCCC
Q 043369 185 TSDSDRKILY-QLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDR--AILLDYVNNRVMKNYPVMPGGISRNYPSTG 261 (526)
Q Consensus 185 ~~~~~~~~w~-~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~~--~~~yDp~t~~w~~~~p~~p~~~~r~y~~~g 261 (526)
+. ... .+.. .. .. .... .+...++|+.++.|+.+ ..+||..+++....+...... .+. .
T Consensus 163 ~~-----~~~~~~~~-~~-~~-----~~v~-~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~-~~~----~ 224 (402)
T 2aq5_A 163 TG-----AAVLTLGP-DV-HP-----DTIY-SVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEG-TRP----V 224 (402)
T ss_dssp TT-----EEEEEECT-TT-CC-----SCEE-EEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCS-SSC----C
T ss_pred CC-----CccEEEec-CC-CC-----CceE-EEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCC-Ccc----e
Confidence 33 221 1210 00 00 0111 22345689988888754 678999988755333111111 000 1
Q ss_pred ceeecccccccccccccCCCCCccCcEEEEEcCCCCCCCchhhhhhcccccccceEEEEeecCCCCceecccCccccccc
Q 043369 262 SSVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTITAQNPKWEMEEMPLNRVMGD 341 (526)
Q Consensus 262 ~~v~lp~~~~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M~~~R~~~~ 341 (526)
..... .+++++++|..... ...+..+|+...........+.....-..
T Consensus 225 ~~~~~------------------~~~~~l~~g~~~~~--------------d~~i~iwd~~~~~~~~~~~~~~~~~~v~~ 272 (402)
T 2aq5_A 225 HAVFV------------------SEGKILTTGFSRMS--------------ERQVALWDTKHLEEPLSLQELDTSSGVLL 272 (402)
T ss_dssp EEEEC------------------STTEEEEEEECTTC--------------CEEEEEEETTBCSSCSEEEECCCCSSCEE
T ss_pred EEEEc------------------CCCcEEEEeccCCC--------------CceEEEEcCccccCCceEEeccCCCceeE
Confidence 11221 27888888832100 12456677653211111112222222223
Q ss_pred eEEeCCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCc--EeecCCCCccccccccceecCCCEEEEecCC
Q 043369 342 MILLPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINR--FRILSPSLIPRLYHSTAHLLSDGRVLVGGSN 413 (526)
Q Consensus 342 ~vvLpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~--Wt~~a~~~~~R~yhs~a~LlpdG~V~v~GG~ 413 (526)
...-|||+.+++.|...+ .+.+||..+.+ ...+...... .........|||++++.+++
T Consensus 273 ~~~s~~~~~l~~~g~~dg------------~i~i~d~~~~~~~~~~l~~~~~~-~~v~~~~~sp~~~~~~s~~~ 333 (402)
T 2aq5_A 273 PFFDPDTNIVYLCGKGDS------------SIRYFEITSEAPFLHYLSMFSSK-ESQRGMGYMPKRGLEVNKCE 333 (402)
T ss_dssp EEEETTTTEEEEEETTCS------------CEEEEEECSSTTCEEEEEEECCS-SCCSEEEECCGGGSCGGGTE
T ss_pred EEEcCCCCEEEEEEcCCC------------eEEEEEecCCCcceEeecccccC-CcccceEEecccccceecce
Confidence 345689888765443212 46889888775 4333322211 11123445688888776554
No 54
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=96.95 E-value=0.1 Score=55.21 Aligned_cols=238 Identities=13% Similarity=0.119 Sum_probs=122.1
Q ss_pred eEEEEeCCCCcEEeCccCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEecC
Q 043369 86 HAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPN 165 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~d 165 (526)
...+||........+..... .....+..+||+.+++|+.. ..+++||.. ...-... .. ....-.+++.-+|
T Consensus 326 ~i~~w~~~~~~~~~~~~~~~-~v~~~~~s~~g~~l~~~~~d---g~v~~~~~~-~~~~~~~--~~--~~~~v~~~~~s~d 396 (577)
T 2ymu_A 326 TVKLWNRNGQHLQTLTGHSS-SVWGVAFSPDGQTIASASDD---KTVKLWNRN-GQLLQTL--TG--HSSSVRGVAFSPD 396 (577)
T ss_dssp CEEEEETTSCEEEEECCCSS-CEEEEEECTTSSEEEEEETT---SEEEEEETT-CCEEEEE--EC--CSSCEEEEEECTT
T ss_pred eEEEEeCCCCeeEEEeCCCC-CEEEEEECCCCCEEEEEeCC---CEEEEEcCC-CCEEEEe--cC--CCCCeEEEEECCC
Confidence 35678876665554433222 22234567899999998763 468889865 3322222 00 1111123445568
Q ss_pred CcEEEEcCccCCeEEEEcCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEccc--eEEEeccCCeEE
Q 043369 166 GKIIVVGGRFQFTYEFIPRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDR--AILLDYVNNRVM 243 (526)
Q Consensus 166 G~v~viGG~~~~~~E~yP~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~~--~~~yDp~t~~w~ 243 (526)
|+.++.|+.+. .+.+|..+.. .-..+... . .... .+...+|++.++.++.+ ..+||.......
T Consensus 397 g~~l~~~~~d~-~v~~~~~~~~----~~~~~~~~--~-------~~v~-~~~~s~d~~~l~~~~~d~~v~~w~~~~~~~~ 461 (577)
T 2ymu_A 397 GQTIASASDDK-TVKLWNRNGQ----LLQTLTGH--S-------SSVW-GVAFSPDDQTIASASDDKTVKLWNRNGQLLQ 461 (577)
T ss_dssp SSCEEEEETTS-EEEEECTTCC----EEEEEECC--S-------SCEE-EEEECTTSSEEEEEETTSEEEEEETTSCEEE
T ss_pred CCEEEEEeCCC-EEEEEeCCCC----EEEEecCC--C-------CCeE-EEEECCCCCEEEEEcCCCEEEEEECCCCEEE
Confidence 99998888653 5666743220 11111110 0 0111 23346799998888754 567886544322
Q ss_pred EeccCCCCCCCCccCCCCceeecccccccccccccCCCCCccCcEEEEEcCCCCCCCchhhhhhcccccccceEEEEeec
Q 043369 244 KNYPVMPGGISRNYPSTGSSVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTITA 323 (526)
Q Consensus 244 ~~~p~~p~~~~r~y~~~g~~v~lp~~~~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~ 323 (526)
.+. .. . +...-+... .++++++.|+.+. .+..+|..
T Consensus 462 -~~~---~~---~----~~v~~~~~s---------------pd~~~las~~~d~-----------------~i~iw~~~- 497 (577)
T 2ymu_A 462 -TLT---GH---S----SSVRGVAFS---------------PDGQTIASASDDK-----------------TVKLWNRN- 497 (577)
T ss_dssp -EEE---CC---S----SCEEEEEEC---------------TTSCEEEEEETTS-----------------EEEEEETT-
T ss_pred -EEc---CC---C----CCEEEEEEc---------------CCCCEEEEEeCCC-----------------EEEEEcCC-
Confidence 221 11 0 111111111 2788888887641 24456532
Q ss_pred CCCCceec-ccCccccccceEEeCCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCcEeecCCCCccccccc----c
Q 043369 324 QNPKWEME-EMPLNRVMGDMILLPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINRFRILSPSLIPRLYHS----T 398 (526)
Q Consensus 324 ~~~~W~~~-~M~~~R~~~~~vvLpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~Wt~~a~~~~~R~yhs----~ 398 (526)
.+-... .-...+.. +....|||+.++.|+.+ + .+.+||........+. .|+ .
T Consensus 498 --~~~~~~~~~h~~~v~-~l~~s~dg~~l~s~~~d-g------------~v~lwd~~~~~~~~~~-------~h~~~v~~ 554 (577)
T 2ymu_A 498 --GQLLQTLTGHSSSVR-GVAFSPDGQTIASASDD-K------------TVKLWNRNGQLLQTLT-------GHSSSVWG 554 (577)
T ss_dssp --SCEEEEEECCSSCEE-EEEECTTSSCEEEEETT-S------------EEEEECTTSCEEEEEE-------CCSSCEEE
T ss_pred --CCEEEEEeCCCCCEE-EEEEcCCCCEEEEEECc-C------------EEEEEeCCCCEEEEEc-------CCCCCEEE
Confidence 221111 11112221 22356899999998865 2 5788996443333221 132 2
Q ss_pred ceecCCCEEEEecCCC
Q 043369 399 AHLLSDGRVLVGGSNP 414 (526)
Q Consensus 399 a~LlpdG~V~v~GG~~ 414 (526)
....|||+.+++||..
T Consensus 555 ~~fs~dg~~l~s~~~D 570 (577)
T 2ymu_A 555 VAFSPDGQTIASASSD 570 (577)
T ss_dssp EEECTTSSCEEEEETT
T ss_pred EEEcCCCCEEEEEeCC
Confidence 3456999999988853
No 55
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.94 E-value=0.17 Score=48.95 Aligned_cols=224 Identities=10% Similarity=0.129 Sum_probs=116.5
Q ss_pred eEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCC-cccccceeEEecCCcEEEEcCccCCeEEEE-cCCCCCC
Q 043369 112 ALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLI-SPRWYASNQILPNGKIIVVGGRFQFTYEFI-PRTSDSD 189 (526)
Q Consensus 112 ~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~-~~R~y~s~~~L~dG~v~viGG~~~~~~E~y-P~~~~~~ 189 (526)
...++|+.+++|+.+ ..+++||.. +.+.... +. ....-.+++.-+||+.++.|+.++ .+.+| ..+..
T Consensus 30 ~~s~~~~~l~s~~~d---g~i~iw~~~-~~~~~~~----~~~h~~~v~~~~~~~~~~~l~s~~~d~-~i~vwd~~~~~-- 98 (312)
T 4ery_A 30 KFSPNGEWLASSSAD---KLIKIWGAY-DGKFEKT----ISGHKLGISDVAWSSDSNLLVSASDDK-TLKIWDVSSGK-- 98 (312)
T ss_dssp EECTTSSEEEEEETT---SCEEEEETT-TCCEEEE----ECCCSSCEEEEEECTTSSEEEEEETTS-EEEEEETTTCC--
T ss_pred EECCCCCEEEEeeCC---CeEEEEeCC-Ccccchh----hccCCCceEEEEEcCCCCEEEEECCCC-EEEEEECCCCc--
Confidence 345688999998863 468888887 5554332 11 111123445557899999988764 56777 44331
Q ss_pred CcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEccc--eEEEeccCCeEEEeccCCCCCCCCccCCCCceeecc
Q 043369 190 RKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDR--AILLDYVNNRVMKNYPVMPGGISRNYPSTGSSVLLP 267 (526)
Q Consensus 190 ~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~~--~~~yDp~t~~w~~~~p~~p~~~~r~y~~~g~~v~lp 267 (526)
.-..+. .... ... .+...+++++++.|+.+ ..+||..+++-.+.++ .. . ....-+.
T Consensus 99 --~~~~~~---~~~~------~v~-~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~---~~---~----~~v~~~~ 156 (312)
T 4ery_A 99 --CLKTLK---GHSN------YVF-CCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP---AH---S----DPVSAVH 156 (312)
T ss_dssp --EEEEEE---CCSS------CEE-EEEECSSSSEEEEEETTSCEEEEETTTCCEEEEEC---CC---S----SCEEEEE
T ss_pred --EEEEEc---CCCC------CEE-EEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEec---CC---C----CcEEEEE
Confidence 111111 1000 011 12345688888888754 6789998876543332 11 0 1111111
Q ss_pred cccccccccccCCCCCccCcEEEEEcCCCCCCCchhhhhhcccccccceEEEEeecCCCCceec-ccCccccccceEEeC
Q 043369 268 VNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTITAQNPKWEME-EMPLNRVMGDMILLP 346 (526)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvLp 346 (526)
.. .+++++++|+.+. .+..+|+.. .+.... .............-|
T Consensus 157 ~~---------------~~~~~l~~~~~d~-----------------~i~~wd~~~--~~~~~~~~~~~~~~~~~~~~~~ 202 (312)
T 4ery_A 157 FN---------------RDGSLIVSSSYDG-----------------LCRIWDTAS--GQCLKTLIDDDNPPVSFVKFSP 202 (312)
T ss_dssp EC---------------TTSSEEEEEETTS-----------------CEEEEETTT--CCEEEEECCSSCCCEEEEEECT
T ss_pred Ec---------------CCCCEEEEEeCCC-----------------cEEEEECCC--CceeeEEeccCCCceEEEEECC
Confidence 11 2677788887641 245677642 221111 111111111234568
Q ss_pred CCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCcEee-cCCCCccccccccceecCCCEEEEecCCCC
Q 043369 347 TGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINRFRI-LSPSLIPRLYHSTAHLLSDGRVLVGGSNPN 415 (526)
Q Consensus 347 dG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~Wt~-~a~~~~~R~yhs~a~LlpdG~V~v~GG~~~ 415 (526)
+|+.+++|+.+ + .+.+||..+.+-.. .................++|+.+++|+..+
T Consensus 203 ~~~~l~~~~~d-~------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg 259 (312)
T 4ery_A 203 NGKYILAATLD-N------------TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDN 259 (312)
T ss_dssp TSSEEEEEETT-T------------EEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTS
T ss_pred CCCEEEEEcCC-C------------eEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCC
Confidence 99999988754 1 57889988774321 111111111111222346899999998654
No 56
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=96.93 E-value=0.22 Score=51.03 Aligned_cols=242 Identities=12% Similarity=0.027 Sum_probs=121.8
Q ss_pred eEEEEeCCCCcEEeCccCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEecC
Q 043369 86 HAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPN 165 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~d 165 (526)
...+||..+++....-..+.... .....++..+++|+.+ ..+.+||.. +.+-... +............ +
T Consensus 180 ~i~vwd~~~~~~~~~~~~h~~~v--~~~~~~~~~l~s~s~d---g~i~~wd~~-~~~~~~~----~~~~~~~v~~~~~-~ 248 (445)
T 2ovr_B 180 TLKVWNAETGECIHTLYGHTSTV--RCMHLHEKRVVSGSRD---ATLRVWDIE-TGQCLHV----LMGHVAAVRCVQY-D 248 (445)
T ss_dssp CEEEEETTTTEEEEEECCCSSCE--EEEEEETTEEEEEETT---SEEEEEESS-SCCEEEE----EECCSSCEEEEEE-C
T ss_pred eEEEEECCcCcEEEEECCCCCcE--EEEEecCCEEEEEeCC---CEEEEEECC-CCcEEEE----EcCCcccEEEEEE-C
Confidence 46788888775433211221111 1122367778888763 578999987 5432211 1111112223344 8
Q ss_pred CcEEEEcCccCCeEEEE-cCCCCCCCcce-eecCCccccCCCCCCCCCCcceEEEecCCcEEEEEccc--eEEEeccCCe
Q 043369 166 GKIIVVGGRFQFTYEFI-PRTSDSDRKIL-YQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDR--AILLDYVNNR 241 (526)
Q Consensus 166 G~v~viGG~~~~~~E~y-P~~~~~~~~~w-~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~~--~~~yDp~t~~ 241 (526)
|+.+++|+.++ .+.+| ..+. .. ..+.. . ..+...+..+|+.++.|+.+ ..+||..+++
T Consensus 249 ~~~l~~~~~dg-~i~iwd~~~~-----~~~~~~~~---~---------~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 310 (445)
T 2ovr_B 249 GRRVVSGAYDF-MVKVWDPETE-----TCLHTLQG---H---------TNRVYSLQFDGIHVVSGSLDTSIRVWDVETGN 310 (445)
T ss_dssp SSCEEEEETTS-CEEEEEGGGT-----EEEEEECC---C---------SSCEEEEEECSSEEEEEETTSCEEEEETTTCC
T ss_pred CCEEEEEcCCC-EEEEEECCCC-----cEeEEecC---C---------CCceEEEEECCCEEEEEeCCCeEEEEECCCCC
Confidence 88888888764 45666 4433 11 11110 0 01223344488888888754 6789998877
Q ss_pred EEEeccCCCCCCCCccCCCCceeecccccccccccccCCCCCccCcEEEEEcCCCCCCCchhhhhhcccccccceEEEEe
Q 043369 242 VMKNYPVMPGGISRNYPSTGSSVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTI 321 (526)
Q Consensus 242 w~~~~p~~p~~~~r~y~~~g~~v~lp~~~~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~ 321 (526)
-...+ ... .. ....+- .+++.+++|+.+. .+..+|+
T Consensus 311 ~~~~~---~~~--~~----~v~~~~------------------~~~~~l~~~~~dg-----------------~i~vwd~ 346 (445)
T 2ovr_B 311 CIHTL---TGH--QS----LTSGME------------------LKDNILVSGNADS-----------------TVKIWDI 346 (445)
T ss_dssp EEEEE---CCC--CS----CEEEEE------------------EETTEEEEEETTS-----------------CEEEEET
T ss_pred EEEEE---cCC--cc----cEEEEE------------------EeCCEEEEEeCCC-----------------eEEEEEC
Confidence 54332 111 10 111111 2455777777541 3456776
Q ss_pred ecCCCCceecccCc-cccccceEEeCCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCcEee-cCCCC--ccccccc
Q 043369 322 TAQNPKWEMEEMPL-NRVMGDMILLPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINRFRI-LSPSL--IPRLYHS 397 (526)
Q Consensus 322 ~~~~~~W~~~~M~~-~R~~~~~vvLpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~Wt~-~a~~~--~~R~yhs 397 (526)
.......+. ..+. ......++. .+++.+++|+.+ | .+.+||..+.+... +.... .....-.
T Consensus 347 ~~~~~~~~~-~~~~~~~~~v~~~~-~~~~~l~s~~~d-g------------~v~iwd~~~~~~~~~~~~~~~~~~~~~v~ 411 (445)
T 2ovr_B 347 KTGQCLQTL-QGPNKHQSAVTCLQ-FNKNFVITSSDD-G------------TVKLWDLKTGEFIRNLVTLESGGSGGVVW 411 (445)
T ss_dssp TTCCEEEEE-CSTTSCSSCEEEEE-ECSSEEEEEETT-S------------EEEEEETTTCCEEEEEEECTTGGGTCEEE
T ss_pred CCCcEEEEE-ccCCCCCCCEEEEE-ECCCEEEEEeCC-C------------eEEEEECCCCceeeeeeccccCCCCceEE
Confidence 421111111 1111 111122233 388999988865 2 57899998886432 21100 0000011
Q ss_pred cceecCCCEEEEecCCCC
Q 043369 398 TAHLLSDGRVLVGGSNPN 415 (526)
Q Consensus 398 ~a~LlpdG~V~v~GG~~~ 415 (526)
....-|||+++++|+...
T Consensus 412 ~~~~s~~~~~la~~~~dg 429 (445)
T 2ovr_B 412 RIRASNTKLVCAVGSRNG 429 (445)
T ss_dssp EEEECSSEEEEEEECSSS
T ss_pred EEEecCCEEEEEEcccCC
Confidence 123458999999998654
No 57
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=96.91 E-value=0.037 Score=55.49 Aligned_cols=132 Identities=10% Similarity=-0.032 Sum_probs=64.6
Q ss_pred EEEEeCCCCcEEeCccCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCccc-----------
Q 043369 87 AVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPR----------- 155 (526)
Q Consensus 87 ~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R----------- 155 (526)
..+||........+.. +..........++|+.+++|+.. ..+.+||.. +.+.... -......
T Consensus 132 i~i~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d---~~i~iwd~~-~~~~~~~--~~~~~~~~~~~~~~~~~~ 204 (425)
T 1r5m_A 132 LRLWNKTGALLNVLNF-HRAPIVSVKWNKDGTHIISMDVE---NVTILWNVI-SGTVMQH--FELKETGGSSINAENHSG 204 (425)
T ss_dssp EEEEETTSCEEEEECC-CCSCEEEEEECTTSSEEEEEETT---CCEEEEETT-TTEEEEE--ECCC--------------
T ss_pred EEEEeCCCCeeeeccC-CCccEEEEEECCCCCEEEEEecC---CeEEEEECC-CCcEEEE--eeccccCccceeeccccC
Confidence 5678844433333332 22222234556789988888763 457788876 4332221 0111110
Q ss_pred ---ccceeEEecCCcEEEEcCccCCeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEccc
Q 043369 156 ---WYASNQILPNGKIIVVGGRFQFTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDR 231 (526)
Q Consensus 156 ---~y~s~~~L~dG~v~viGG~~~~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~~ 231 (526)
.-.+++..+++ .+++|+.++ .+.+| ..+.. ....+... . .... .+...++|+.++.|+.+
T Consensus 205 ~~~~~~~~~~~~~~-~~~~~~~~g-~i~~~d~~~~~----~~~~~~~~--~-------~~i~-~~~~~~~~~~l~~~~~d 268 (425)
T 1r5m_A 205 DGSLGVDVEWVDDD-KFVIPGPKG-AIFVYQITEKT----PTGKLIGH--H-------GPIS-VLEFNDTNKLLLSASDD 268 (425)
T ss_dssp -CCCBSCCEEEETT-EEEEECGGG-CEEEEETTCSS----CSEEECCC--S-------SCEE-EEEEETTTTEEEEEETT
T ss_pred CcceeeEEEEcCCC-EEEEEcCCC-eEEEEEcCCCc----eeeeeccC--C-------CceE-EEEECCCCCEEEEEcCC
Confidence 02233444454 567777654 45666 44331 11111100 0 0111 23345689888888754
Q ss_pred --eEEEeccCCe
Q 043369 232 --AILLDYVNNR 241 (526)
Q Consensus 232 --~~~yDp~t~~ 241 (526)
..+||..+.+
T Consensus 269 ~~i~i~d~~~~~ 280 (425)
T 1r5m_A 269 GTLRIWHGGNGN 280 (425)
T ss_dssp SCEEEECSSSBS
T ss_pred CEEEEEECCCCc
Confidence 6788887654
No 58
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.88 E-value=0.04 Score=54.37 Aligned_cols=248 Identities=10% Similarity=0.090 Sum_probs=127.8
Q ss_pred EEecCCeEEEEecccCCCCCccCCCCccccCccccCCCCcceEEEEeCCCCcEEeCccC--CccccccceEcCC--CcEE
Q 043369 45 ALLPNDRIIAFDRSHFGPSNITLPQGKCIKGVELETSDCYAHAVEFDPITRKVRPLTIQ--TDTWCSSGALLAN--GVLV 120 (526)
Q Consensus 45 a~l~~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~yDp~t~~w~~~~~~--~~~fc~~~~~l~~--G~l~ 120 (526)
+.-++|+.++.++.+ | ...+||...++...+... +..........++ ++++
T Consensus 18 ~~s~~~~~l~~~~~d----------g---------------~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l 72 (379)
T 3jrp_A 18 VLDYYGKRLATCSSD----------K---------------TIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTIL 72 (379)
T ss_dssp EECSSSSEEEEEETT----------S---------------CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEE
T ss_pred EEcCCCCEEEEEECC----------C---------------cEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEE
Confidence 345788887776643 2 356788776665554322 2221222233344 8999
Q ss_pred EEcCCCCCccEEEEEcCCCCCCcccccCCCCC-cccccceeEEecC--CcEEEEcCccCCeEEEE-cCCCCCCCcceeec
Q 043369 121 QTGGYRLGERVVRYLKPCSDCDWEEDHQNGLI-SPRWYASNQILPN--GKIIVVGGRFQFTYEFI-PRTSDSDRKILYQL 196 (526)
Q Consensus 121 v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~-~~R~y~s~~~L~d--G~v~viGG~~~~~~E~y-P~~~~~~~~~w~~~ 196 (526)
++|+.+ ..+.+||.. +.+|... ..+. ....-.+++..++ |+.+++|+.++ .+.+| ..... .....
T Consensus 73 ~s~~~d---g~v~iwd~~-~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~-~i~v~d~~~~~----~~~~~ 141 (379)
T 3jrp_A 73 ASCSYD---GKVLIWKEE-NGRWSQI--AVHAVHSASVNSVQWAPHEYGPLLLVASSDG-KVSVVEFKENG----TTSPI 141 (379)
T ss_dssp EEEETT---SCEEEEEEE-TTEEEEE--EEECCCSSCEEEEEECCGGGCSEEEEEETTS-EEEEEECCTTS----CCCEE
T ss_pred EEeccC---CEEEEEEcC-CCceeEe--eeecCCCcceEEEEeCCCCCCCEEEEecCCC-cEEEEecCCCC----ceeeE
Confidence 998863 468889887 7666544 2222 1222234444556 88888888764 45666 33321 11111
Q ss_pred CCccccCCCCCCCCCCcceEEEec-------------CCcEEEEEccc--eEEEeccCCe--EEEeccCCCCCCCCccCC
Q 043369 197 PFLKETMHSPKIPNNLYPFLHLST-------------DGNLFIFANDR--AILLDYVNNR--VMKNYPVMPGGISRNYPS 259 (526)
Q Consensus 197 p~l~~~~~~~~~~~~~yp~~~~~~-------------dG~Iy~~Gg~~--~~~yDp~t~~--w~~~~p~~p~~~~r~y~~ 259 (526)
.. ... . .... .+...+ |+++++.|+.+ ..+||..+++ +. ....+...
T Consensus 142 ~~-~~~-~-----~~v~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~h------- 205 (379)
T 3jrp_A 142 II-DAH-A-----IGVN-SASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYV-LESTLEGH------- 205 (379)
T ss_dssp EE-ECC-T-----TCEE-EEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEE-EEEEECCC-------
T ss_pred Ee-cCC-C-----CceE-EEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCccee-eEEEEecc-------
Confidence 00 000 0 0001 111223 68888888754 6788887643 22 11111211
Q ss_pred CCceeecccccccccccccCCCCCccC---cEEEEEcCCCCCCCchhhhhhcccccccceEEEEeecCCCCceec--cc-
Q 043369 260 TGSSVLLPVNLSSINVHINNNNKPVVH---SQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTITAQNPKWEME--EM- 333 (526)
Q Consensus 260 ~g~~v~lp~~~~~~~~~~~~~~~~~~~---gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~--~M- 333 (526)
.+...-+... .+ ++++++|+.+. .+..||+......+... ..
T Consensus 206 ~~~v~~~~~s---------------p~~~~~~~l~s~~~dg-----------------~i~iwd~~~~~~~~~~~~~~~~ 253 (379)
T 3jrp_A 206 SDWVRDVAWS---------------PTVLLRSYLASVSQDR-----------------TCIIWTQDNEQGPWKKTLLKEE 253 (379)
T ss_dssp SSCEEEEEEC---------------CCCSSSEEEEEEETTS-----------------CEEEEEESSTTSCCEEEESSSS
T ss_pred cCcEeEEEEC---------------CCCCCCCeEEEEeCCC-----------------EEEEEeCCCCCccceeeeeccc
Confidence 0111111111 13 78888888652 35578876433333332 11
Q ss_pred CccccccceEEeCCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCC-cEeecCCC
Q 043369 334 PLNRVMGDMILLPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKIN-RFRILSPS 389 (526)
Q Consensus 334 ~~~R~~~~~vvLpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~-~Wt~~a~~ 389 (526)
.....-.+...-|||+.+++++.+ | .+.+||..+. +|..+...
T Consensus 254 ~~~~~v~~~~~s~~g~~l~~~~~d-g------------~i~iw~~~~~~~~~~~~~~ 297 (379)
T 3jrp_A 254 KFPDVLWRASWSLSGNVLALSGGD-N------------KVTLWKENLEGKWEPAGEV 297 (379)
T ss_dssp CCSSCEEEEEECSSSCCEEEEESS-S------------SEEEEEEEETTEEEEEEEE
T ss_pred cCCCcEEEEEEcCCCCEEEEecCC-C------------cEEEEeCCCCCccccccce
Confidence 122222233456899999988864 2 4688888744 77766543
No 59
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=96.87 E-value=0.14 Score=51.13 Aligned_cols=133 Identities=16% Similarity=0.149 Sum_probs=71.6
Q ss_pred eEEEEeCCCCcEEeCccCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEecC
Q 043369 86 HAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPN 165 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~d 165 (526)
...+||+.+++....-.... .....+..++|+.++++|..+ ..+.+||.. +.+.... +.....-.+++.-+|
T Consensus 55 ~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~--~~v~v~d~~-~~~~~~~----~~~~~~~~~~~~s~d 126 (391)
T 1l0q_A 55 DVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMAS--STLSVIDTT-SNTVAGT----VKTGKSPLGLALSPD 126 (391)
T ss_dssp EEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTT--TEEEEEETT-TTEEEEE----EECSSSEEEEEECTT
T ss_pred eEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCC--CEEEEEECC-CCeEEEE----EeCCCCcceEEECCC
Confidence 46789998887654322222 222344567888665554322 579999998 6544322 222222234555568
Q ss_pred CcEE-EEcCccCCeEEEE-cCCCCCCCccee-ecCCccccCCCCCCCCCCcce-EEEecCCc-EEEEEcc--ceEEEecc
Q 043369 166 GKII-VVGGRFQFTYEFI-PRTSDSDRKILY-QLPFLKETMHSPKIPNNLYPF-LHLSTDGN-LFIFAND--RAILLDYV 238 (526)
Q Consensus 166 G~v~-viGG~~~~~~E~y-P~~~~~~~~~w~-~~p~l~~~~~~~~~~~~~yp~-~~~~~dG~-Iy~~Gg~--~~~~yDp~ 238 (526)
|+.+ +.++.+ ..+.+| ..+. +.. .++. . ..+. +...++|+ ||+.+.. ...+||..
T Consensus 127 g~~l~~~~~~~-~~v~~~d~~~~-----~~~~~~~~--~----------~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~ 188 (391)
T 1l0q_A 127 GKKLYVTNNGD-KTVSVINTVTK-----AVINTVSV--G----------RSPKGIAVTPDGTKVYVANFDSMSISVIDTV 188 (391)
T ss_dssp SSEEEEEETTT-TEEEEEETTTT-----EEEEEEEC--C----------SSEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred CCEEEEEeCCC-CEEEEEECCCC-----cEEEEEec--C----------CCcceEEECCCCCEEEEEeCCCCEEEEEECC
Confidence 8744 555433 467777 5443 221 1111 0 0122 23456775 5555543 47889999
Q ss_pred CCeEEE
Q 043369 239 NNRVMK 244 (526)
Q Consensus 239 t~~w~~ 244 (526)
+++...
T Consensus 189 ~~~~~~ 194 (391)
T 1l0q_A 189 TNSVID 194 (391)
T ss_dssp TTEEEE
T ss_pred CCeEEE
Confidence 887653
No 60
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=96.83 E-value=0.11 Score=51.09 Aligned_cols=132 Identities=11% Similarity=0.011 Sum_probs=66.2
Q ss_pred CCcEEEccc-CCccceeEEEEecCCeEEEEecccCCCCCccCCCCccccCccccCCCCcceEEEEeCCCCcEEeCccC--
Q 043369 27 EGKWKLLKR-SIGVSAMHMALLPNDRIIAFDRSHFGPSNITLPQGKCIKGVELETSDCYAHAVEFDPITRKVRPLTIQ-- 103 (526)
Q Consensus 27 ~g~W~~~~~-~~~v~~~~~a~l~~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~yDp~t~~w~~~~~~-- 103 (526)
.|+++.+.. .....+..+++-++|++|+.+.... .....+||..+++++.+...
T Consensus 27 tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~~~-----------------------~~~v~~~~~~~g~~~~~~~~~~ 83 (347)
T 3hfq_A 27 AKTLTNDGLLAATQNPTYLALSAKDCLYSVDKEDD-----------------------EGGIAAWQIDGQTAHKLNTVVA 83 (347)
T ss_dssp TTEEEEEEEEEECSCCCCEEECTTCEEEEEEEETT-----------------------EEEEEEEEEETTEEEEEEEEEE
T ss_pred CCeEEEeeeeeccCCcceEEEccCCeEEEEEecCC-----------------------CceEEEEEecCCcEEEeeeeec
Confidence 466655321 1112345566678999666654210 02467788888877665532
Q ss_pred CccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCccccc----CCCCCccc----ccceeEEecCCcEEEEcCcc
Q 043369 104 TDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDH----QNGLISPR----WYASNQILPNGKIIVVGGRF 175 (526)
Q Consensus 104 ~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~----~~~m~~~R----~y~s~~~L~dG~v~viGG~~ 175 (526)
........++-+||+.+++.+..+ ..+.+||.....+..... ...-+.+| .-..++.-+||++|+.+. .
T Consensus 84 ~~~~p~~~a~spdg~~l~~~~~~~--~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~-~ 160 (347)
T 3hfq_A 84 PGTPPAYVAVDEARQLVYSANYHK--GTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDL-G 160 (347)
T ss_dssp ESCCCSEEEEETTTTEEEEEETTT--TEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEET-T
T ss_pred CCCCCEEEEECCCCCEEEEEeCCC--CEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeC-C
Confidence 111222345567998666554322 467777764122222210 00000011 123456667999776544 3
Q ss_pred CCeEEEE-cC
Q 043369 176 QFTYEFI-PR 184 (526)
Q Consensus 176 ~~~~E~y-P~ 184 (526)
...+.+| ..
T Consensus 161 ~~~v~~~~~~ 170 (347)
T 3hfq_A 161 SDKVYVYNVS 170 (347)
T ss_dssp TTEEEEEEEC
T ss_pred CCEEEEEEEC
Confidence 3457777 44
No 61
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=96.77 E-value=0.24 Score=57.94 Aligned_cols=274 Identities=11% Similarity=-0.011 Sum_probs=136.8
Q ss_pred EEEEecCCeEEEEecccCCCCCccCCCCccccCccccCCCCcceEEEEeCCCCcEEeCccCCccccccceEcCCCcEEEE
Q 043369 43 HMALLPNDRIIAFDRSHFGPSNITLPQGKCIKGVELETSDCYAHAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQT 122 (526)
Q Consensus 43 ~~a~l~~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~v~ 122 (526)
..+.-++|+.++.++.+ | ...+||..+++....-..+.......+..+||+.+++
T Consensus 620 ~~~~s~~~~~l~s~~~d----------~---------------~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s 674 (1249)
T 3sfz_A 620 HACFSQDGQRIASCGAD----------K---------------TLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIAT 674 (1249)
T ss_dssp EEEECTTSSEEEEEETT----------S---------------CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred EEEECCCCCEEEEEeCC----------C---------------eEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEE
Confidence 34455788888776642 2 3678999887643322223332333456779999999
Q ss_pred cCCCCCccEEEEEcCCCCCCcccccCCCCC-cccccceeEEec--CCcEEEEcCccCCeEEEE-cCCCCCCCccee-ecC
Q 043369 123 GGYRLGERVVRYLKPCSDCDWEEDHQNGLI-SPRWYASNQILP--NGKIIVVGGRFQFTYEFI-PRTSDSDRKILY-QLP 197 (526)
Q Consensus 123 GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~-~~R~y~s~~~L~--dG~v~viGG~~~~~~E~y-P~~~~~~~~~w~-~~p 197 (526)
|+.+ ..+.+||.. +.+.... +. ....-.+++..+ ++.+++.|+.++ .+.+| ..+. ... .+.
T Consensus 675 ~~~d---~~v~vwd~~-~~~~~~~----~~~~~~~v~~~~~~~~~~~~~l~sg~~d~-~v~vwd~~~~-----~~~~~~~ 740 (1249)
T 3sfz_A 675 CSAD---KKVKIWDSA-TGKLVHT----YDEHSEQVNCCHFTNKSNHLLLATGSNDF-FLKLWDLNQK-----ECRNTMF 740 (1249)
T ss_dssp EETT---SEEEEEETT-TCCEEEE----EECCSSCEEEEEECSSSSCCEEEEEETTS-CEEEEETTSS-----SEEEEEC
T ss_pred EeCC---CeEEEEECC-CCceEEE----EcCCCCcEEEEEEecCCCceEEEEEeCCC-eEEEEECCCc-----chhheec
Confidence 9863 579999987 5543221 11 111122233333 445666666553 56677 4433 211 111
Q ss_pred CccccCCCCCCCCCCcceEEEecCCcEEEEEccc--eEEEeccCCeEEEeccCCCCCCCCccC-C--CCceeeccccccc
Q 043369 198 FLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDR--AILLDYVNNRVMKNYPVMPGGISRNYP-S--TGSSVLLPVNLSS 272 (526)
Q Consensus 198 ~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~~--~~~yDp~t~~w~~~~p~~p~~~~r~y~-~--~g~~v~lp~~~~~ 272 (526)
. .. ... -.+...++|+.++.|+.+ ..+||..+++....+...........+ . ......+...
T Consensus 741 ~--h~-------~~v-~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s--- 807 (1249)
T 3sfz_A 741 G--HT-------NSV-NHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWS--- 807 (1249)
T ss_dssp C--CS-------SCE-EEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBC---
T ss_pred C--CC-------CCE-EEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEEC---
Confidence 1 00 011 123446789999888754 678998877644322110000000000 0 0000001111
Q ss_pred ccccccCCCCCccCcEEEEEcCCCCCCCchhhhhhcccccccceEEEEeecCCCCceec-ccCccccccceEEeCCCcEE
Q 043369 273 INVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTITAQNPKWEME-EMPLNRVMGDMILLPTGDVL 351 (526)
Q Consensus 273 ~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvLpdG~V~ 351 (526)
.+++.+++++.. .+..+|+.. ...... .......-......|+|+.+
T Consensus 808 ------------~dg~~l~~~~~~------------------~v~~~d~~~--~~~~~~~~~~~~~~v~~~~~sp~~~~l 855 (1249)
T 3sfz_A 808 ------------ADGDKIIVAAKN------------------KVLLFDIHT--SGLLAEIHTGHHSTIQYCDFSPYDHLA 855 (1249)
T ss_dssp ------------TTSSEEEEEETT------------------EEEEEETTT--CCEEEEEECSSSSCCCEEEECSSTTEE
T ss_pred ------------CCCCEEEEEcCC------------------cEEEEEecC--CCceeEEcCCCCCceEEEEEcCCCCEE
Confidence 256666665521 234566542 222211 11111222233567899999
Q ss_pred EEcCcCCCCCCccCCCCCccccEEEeCCCCcEeecCCCCccccccccceecCCCEEEEecCCCC
Q 043369 352 IINGAAKGTAGWGAAREPVLNPVIYCPKINRFRILSPSLIPRLYHSTAHLLSDGRVLVGGSNPN 415 (526)
Q Consensus 352 vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~Wt~~a~~~~~R~yhs~a~LlpdG~V~v~GG~~~ 415 (526)
++|+.+ + .+.+||..+.+-...-.-. ...-......|||+.+++|+...
T Consensus 856 ~~~~~d-g------------~v~vwd~~~~~~~~~~~~h--~~~v~~v~~spdg~~l~s~s~dg 904 (1249)
T 3sfz_A 856 VIALSQ-Y------------CVELWNIDSRLKVADCRGH--LSWVHGVMFSPDGSSFLTASDDQ 904 (1249)
T ss_dssp EEECSS-S------------CEEEEETTTTEEEEEECCC--SSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEeCC-C------------eEEEEEcCCCceeeecCCC--ccceEEEEECCCCCEEEEEeCCC
Confidence 998865 2 5789998876322111110 11112244568999888888654
No 62
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.74 E-value=0.025 Score=56.38 Aligned_cols=137 Identities=12% Similarity=0.050 Sum_probs=71.3
Q ss_pred EEEEeCCCCcEEeCccC--CccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCC-cccccCCCCC-cccccceeEE
Q 043369 87 AVEFDPITRKVRPLTIQ--TDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCD-WEEDHQNGLI-SPRWYASNQI 162 (526)
Q Consensus 87 ~~~yDp~t~~w~~~~~~--~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~-W~~~~~~~m~-~~R~y~s~~~ 162 (526)
..+||..++.|..+... +..........++|+.+++|+.+ ..+++||.. +.. |... ..+. ....-.+++.
T Consensus 35 i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d---~~v~vwd~~-~~~~~~~~--~~~~~~~~~v~~~~~ 108 (377)
T 3dwl_C 35 VELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQD---RNAYVYEKR-PDGTWKQT--LVLLRLNRAATFVRW 108 (377)
T ss_dssp BCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETT---SSEEEC-------CCCCE--EECCCCSSCEEEEEC
T ss_pred EEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCC---CeEEEEEcC-CCCceeee--eEecccCCceEEEEE
Confidence 45788888877766544 22223334566789999998863 468899987 555 5443 1222 2222234444
Q ss_pred ecCCcEEEEcCccCCeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEccc--eEEEeccC
Q 043369 163 LPNGKIIVVGGRFQFTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDR--AILLDYVN 239 (526)
Q Consensus 163 L~dG~v~viGG~~~~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~~--~~~yDp~t 239 (526)
.+||+.++.|+.++ .+.+| ..+. ..|.....+..... .... .+...++|++++.|+.+ ..+||..+
T Consensus 109 ~~~~~~l~~~~~d~-~i~iwd~~~~----~~~~~~~~~~~~h~-----~~v~-~~~~~~~~~~l~~~~~d~~i~iwd~~~ 177 (377)
T 3dwl_C 109 SPNEDKFAVGSGAR-VISVCYFEQE----NDWWVSKHLKRPLR-----STIL-SLDWHPNNVLLAAGCADRKAYVLSAYV 177 (377)
T ss_dssp CTTSSCCEEEESSS-CEEECCC---------CCCCEEECSSCC-----SCEE-EEEECTTSSEEEEEESSSCEEEEEECC
T ss_pred CCCCCEEEEEecCC-eEEEEEECCc----ccceeeeEeecccC-----CCeE-EEEEcCCCCEEEEEeCCCEEEEEEEEe
Confidence 56899998888764 45666 3332 12221111111000 0111 12345689999888754 67788764
Q ss_pred C
Q 043369 240 N 240 (526)
Q Consensus 240 ~ 240 (526)
.
T Consensus 178 ~ 178 (377)
T 3dwl_C 178 R 178 (377)
T ss_dssp S
T ss_pred c
Confidence 3
No 63
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=96.74 E-value=0.13 Score=51.72 Aligned_cols=238 Identities=11% Similarity=0.121 Sum_probs=115.8
Q ss_pred eEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEecCCcEEEEcCccCCeEEEE-cCCCCCCC
Q 043369 112 ALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPNGKIIVVGGRFQFTYEFI-PRTSDSDR 190 (526)
Q Consensus 112 ~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~dG~v~viGG~~~~~~E~y-P~~~~~~~ 190 (526)
..-++|+.++.|+.+ ..+++||.. +.+-... -.. ...+-.+++.-+||+.++.||.+. .+.+| ........
T Consensus 73 ~~sp~~~~l~s~s~D---~~v~iWd~~-~~~~~~~--~~~-h~~~v~~~~~s~~g~~las~~~d~-~v~iw~~~~~~~~~ 144 (380)
T 3iz6_a 73 DWTPEKNWIVSASQD---GRLIVWNAL-TSQKTHA--IKL-HCPWVMECAFAPNGQSVACGGLDS-ACSIFNLSSQADRD 144 (380)
T ss_dssp EECTTSSCEEEEETT---SEEEEEETT-TTEEEEE--EEC-CCTTCCCCEECTTSSEEEECCSSS-CCEEEECCCCSSCC
T ss_pred EEcCCCCEEEEEeCC---CeEEEEECC-CCccceE--Eec-CCCCEEEEEECCCCCEEEEeeCCC-cEEEEECCCCcccc
Confidence 455789999999873 578999987 5432211 011 122333455567999999999875 34555 22210000
Q ss_pred cceeecCCccccCCCCCCCCCCcceEEEec-CCcEEEEEcc--ceEEEeccCCeEEEecc-CCCCCCCCccCCCCceeec
Q 043369 191 KILYQLPFLKETMHSPKIPNNLYPFLHLST-DGNLFIFAND--RAILLDYVNNRVMKNYP-VMPGGISRNYPSTGSSVLL 266 (526)
Q Consensus 191 ~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~-dG~Iy~~Gg~--~~~~yDp~t~~w~~~~p-~~p~~~~r~y~~~g~~v~l 266 (526)
........+..... .... +...+ ++..++.|+. ...+||..+++-...+. ..+.+ . .....-+
T Consensus 145 ~~~~~~~~~~gh~~------~v~~-~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~--h----~~~v~~~ 211 (380)
T 3iz6_a 145 GNMPVSRVLTGHKG------YASS-CQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSG--H----TADVLSL 211 (380)
T ss_dssp CSSTTCCBCCCCSS------CCCC-CBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSS--C----CSCEEEE
T ss_pred CCccceeeccCCCc------ceEE-EEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCC--C----ccCeEEE
Confidence 00000001111000 0011 11123 3445556654 46789998877543221 11111 0 1111111
Q ss_pred ccccccccccccCCCCCccCcEEEEEcCCCCCCCchhhhhhcccccccceEEEEeecCCCCceecccCccccccceEEeC
Q 043369 267 PVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTITAQNPKWEMEEMPLNRVMGDMILLP 346 (526)
Q Consensus 267 p~~~~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M~~~R~~~~~vvLp 346 (526)
... ..++.+++.|+.+. ++..+|+......-....-..... .+....|
T Consensus 212 ~~~--------------~~~~~~l~sgs~D~-----------------~v~~wd~~~~~~~~~~~~~h~~~v-~~v~~~p 259 (380)
T 3iz6_a 212 SIN--------------SLNANMFISGSCDT-----------------TVRLWDLRITSRAVRTYHGHEGDI-NSVKFFP 259 (380)
T ss_dssp EEC--------------SSSCCEEEEEETTS-----------------CEEEEETTTTCCCCEEECCCSSCC-CEEEECT
T ss_pred Eee--------------cCCCCEEEEEECCC-----------------eEEEEECCCCCcceEEECCcCCCe-EEEEEec
Confidence 110 13678888888652 355677642111111111111112 1334568
Q ss_pred CCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCcEee-cCCCCcc----ccccccceecCCCEEEEecCCCC
Q 043369 347 TGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINRFRI-LSPSLIP----RLYHSTAHLLSDGRVLVGGSNPN 415 (526)
Q Consensus 347 dG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~Wt~-~a~~~~~----R~yhs~a~LlpdG~V~v~GG~~~ 415 (526)
||+.++.|+.+ + ++.+||..+.+-.. ....... ...-.....-|||+.+++|+...
T Consensus 260 ~~~~l~s~s~D-~------------~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg 320 (380)
T 3iz6_a 260 DGQRFGTGSDD-G------------TCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNG 320 (380)
T ss_dssp TSSEEEEECSS-S------------CEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTS
T ss_pred CCCeEEEEcCC-C------------eEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCC
Confidence 99999999865 2 57899988874221 1111000 00112344568999999998643
No 64
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=96.72 E-value=0.23 Score=49.03 Aligned_cols=225 Identities=12% Similarity=0.163 Sum_probs=114.4
Q ss_pred EcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEecCCcEEEEcCccCCeEEEE-cCCCCCCCc
Q 043369 113 LLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPNGKIIVVGGRFQFTYEFI-PRTSDSDRK 191 (526)
Q Consensus 113 ~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~dG~v~viGG~~~~~~E~y-P~~~~~~~~ 191 (526)
.-+||+++++|+.+ ..+++||.. +.+-... -.. ...+-.+++.-++|+.++.||.++ .+.+| ..+.. .
T Consensus 63 ~s~d~~~l~s~s~D---g~v~iWd~~-~~~~~~~--~~~-~~~~v~~~~~s~~~~~l~s~~~d~-~v~iw~~~~~~---~ 131 (340)
T 1got_B 63 WGTDSRLLLSASQD---GKLIIWDSY-TTNKVHA--IPL-RSSWVMTCAYAPSGNYVACGGLDN-ICSIYNLKTRE---G 131 (340)
T ss_dssp ECTTSSEEEEEETT---TEEEEEETT-TCCEEEE--EEC-SSSCEEEEEECTTSSEEEEEETTC-EEEEEETTTCS---B
T ss_pred ECCCCCEEEEEeCC---CcEEEEECC-CCCcceE--eec-CCccEEEEEECCCCCEEEEEeCCC-eEEEEECccCC---C
Confidence 44689999999873 578999976 4432211 011 112233455567899999998764 56677 43321 0
Q ss_pred ceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEc-cceEEEeccCCeEEEeccCCCCCCCCccCCCCceeeccccc
Q 043369 192 ILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFAN-DRAILLDYVNNRVMKNYPVMPGGISRNYPSTGSSVLLPVNL 270 (526)
Q Consensus 192 ~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg-~~~~~yDp~t~~w~~~~p~~p~~~~r~y~~~g~~v~lp~~~ 270 (526)
.......+.... .... .+...++++++..++ ....+||..+++....+ ... .+...-+.+.
T Consensus 132 ~~~~~~~~~~h~------~~v~-~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~---~~h-------~~~v~~~~~~- 193 (340)
T 1got_B 132 NVRVSRELAGHT------GYLS-CCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF---TGH-------TGDVMSLSLA- 193 (340)
T ss_dssp SCEEEEEEECCS------SCEE-EEEEEETTEEEEEETTSCEEEEETTTTEEEEEE---CCC-------SSCEEEEEEC-
T ss_pred cceeEEEecCCC------ccEE-EEEECCCCcEEEEECCCcEEEEECCCCcEEEEE---cCC-------CCceEEEEEC-
Confidence 111111111100 0111 112245677544333 34678999888754322 211 1111111111
Q ss_pred ccccccccCCCCCccCcEEEEEcCCCCCCCchhhhhhcccccccceEEEEeecCCCCceec-ccCccccccceEEeCCCc
Q 043369 271 SSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTITAQNPKWEME-EMPLNRVMGDMILLPTGD 349 (526)
Q Consensus 271 ~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvLpdG~ 349 (526)
.++++++.|+.+. ++..+|+.. ..-... .-..... .+....|||+
T Consensus 194 --------------~~~~~l~sg~~d~-----------------~v~~wd~~~--~~~~~~~~~h~~~v-~~v~~~p~~~ 239 (340)
T 1got_B 194 --------------PDTRLFVSGACDA-----------------SAKLWDVRE--GMCRQTFTGHESDI-NAICFFPNGN 239 (340)
T ss_dssp --------------TTSSEEEEEETTS-----------------CEEEEETTT--CSEEEEECCCSSCE-EEEEECTTSS
T ss_pred --------------CCCCEEEEEeCCC-----------------cEEEEECCC--CeeEEEEcCCcCCE-EEEEEcCCCC
Confidence 2677888888652 345677642 211111 1111111 1334568999
Q ss_pred EEEEcCcCCCCCCccCCCCCccccEEEeCCCCcEee-cCCCCccccccccceecCCCEEEEecCCC
Q 043369 350 VLIINGAAKGTAGWGAAREPVLNPVIYCPKINRFRI-LSPSLIPRLYHSTAHLLSDGRVLVGGSNP 414 (526)
Q Consensus 350 V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~Wt~-~a~~~~~R~yhs~a~LlpdG~V~v~GG~~ 414 (526)
.++.|+.+ + ++.+||..+.+-.. ...... ...-.....-|||+.+++|+..
T Consensus 240 ~l~s~s~d-~------------~v~iwd~~~~~~~~~~~~~~~-~~~v~~~~~s~~g~~l~~g~~d 291 (340)
T 1got_B 240 AFATGSDD-A------------TCRLFDLRADQELMTYSHDNI-ICGITSVSFSKSGRLLLAGYDD 291 (340)
T ss_dssp EEEEEETT-S------------CEEEEETTTTEEEEEECCTTC-CSCEEEEEECTTSSEEEEEETT
T ss_pred EEEEEcCC-C------------cEEEEECCCCcEEEEEccCCc-ccceEEEEECCCCCEEEEECCC
Confidence 99999865 2 56899988764221 111100 0011223456899999999854
No 65
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=96.71 E-value=0.28 Score=47.39 Aligned_cols=205 Identities=11% Similarity=0.142 Sum_probs=100.4
Q ss_pred CCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCc-ccccceeEEecC--CcEEEEcCccCCeEEEE-cCCCCCCCc
Q 043369 116 NGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLIS-PRWYASNQILPN--GKIIVVGGRFQFTYEFI-PRTSDSDRK 191 (526)
Q Consensus 116 ~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~-~R~y~s~~~L~d--G~v~viGG~~~~~~E~y-P~~~~~~~~ 191 (526)
+|++++.|+.+ ..++++|.. +.+|... ..+.. ...-.+++..++ |++++.|+.++ .+.+| ..+..
T Consensus 66 ~g~~l~s~s~D---~~v~iWd~~-~~~~~~~--~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~-~v~~wd~~~~~---- 134 (297)
T 2pm7_B 66 FGTILASCSYD---GKVMIWKEE-NGRWSQI--AVHAVHSASVNSVQWAPHEYGPMLLVASSDG-KVSVVEFKENG---- 134 (297)
T ss_dssp GCSEEEEEETT---TEEEEEEBS-SSCBCCC--EEECCCSSCEEEEEECCGGGCSEEEEEETTS-EEEEEEBCSSS----
T ss_pred cCCEEEEEcCC---CEEEEEEcC-CCceEEE--EEeecCCCceeEEEeCcCCCCcEEEEEECCC-cEEEEEecCCC----
Confidence 48899999873 589999988 7767543 11221 111122333334 78888887664 56666 43321
Q ss_pred ceeecCCccccCCCCCCCCCCcceEEEec-------------CCcEEEEEccc--eEEEeccCCe--EEEeccCCCCCCC
Q 043369 192 ILYQLPFLKETMHSPKIPNNLYPFLHLST-------------DGNLFIFANDR--AILLDYVNNR--VMKNYPVMPGGIS 254 (526)
Q Consensus 192 ~w~~~p~l~~~~~~~~~~~~~yp~~~~~~-------------dG~Iy~~Gg~~--~~~yDp~t~~--w~~~~p~~p~~~~ 254 (526)
.+.... +.. .. ...+. +...+ ++++++.|+.+ ..+||..+++ +. ....+...
T Consensus 135 ~~~~~~-~~~-h~-----~~v~~-~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~-~~~~l~~H-- 203 (297)
T 2pm7_B 135 TTSPII-IDA-HA-----IGVNS-ASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYV-LESTLEGH-- 203 (297)
T ss_dssp CBCCEE-EEC-CS-----SCEEE-EEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEE-EEEEECCC--
T ss_pred ceeeee-eec-cc-----Cccce-EeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEE-EEEEecCC--
Confidence 111000 000 00 00000 01112 36788888754 6778877643 32 11122221
Q ss_pred CccCCCCceeecccccccccccccCCCCCccCcEEEEEcCCCCCCCchhhhhhcccccccceEEEEeecCCCCceeccc-
Q 043369 255 RNYPSTGSSVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTITAQNPKWEMEEM- 333 (526)
Q Consensus 255 r~y~~~g~~v~lp~~~~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M- 333 (526)
. +...-+...| +...+++++.|+.+. ++..+|+......|....+
T Consensus 204 ~-----~~V~~v~~sp------------~~~~~~~las~s~D~-----------------~v~iWd~~~~~~~~~~~~~~ 249 (297)
T 2pm7_B 204 S-----DWVRDVAWSP------------TVLLRSYMASVSQDR-----------------TCIIWTQDNEQGPWKKTLLK 249 (297)
T ss_dssp S-----SCEEEEEECC------------CCSSSEEEEEEETTS-----------------CEEEEEESSTTSCCEEEESS
T ss_pred C-----CceEEEEECC------------CCCCceEEEEEECCC-----------------cEEEEEeCCCCCccceeeee
Confidence 1 1111111111 001257888887652 3566777543344654322
Q ss_pred --CccccccceEEeCCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCC-cEeecCCC
Q 043369 334 --PLNRVMGDMILLPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKIN-RFRILSPS 389 (526)
Q Consensus 334 --~~~R~~~~~vvLpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~-~Wt~~a~~ 389 (526)
.....-.....-|||++++.||.+ + .+.+|+...+ .|..+..+
T Consensus 250 ~~~~~~~v~~~~~s~~g~~las~~~D-~------------~v~lw~~~~~g~w~~~~~~ 295 (297)
T 2pm7_B 250 EEKFPDVLWRASWSLSGNVLALSGGD-N------------KVTLWKENLEGKWEPAGEV 295 (297)
T ss_dssp SSCCSSCEEEEEECSSSCCEEEEETT-S------------CEEEEEECTTSCEEEC---
T ss_pred cccCCCcEEEEEECCCCCEEEEEcCC-C------------cEEEEEECCCCcEEecccc
Confidence 111111122345899999998865 2 4688987744 78876543
No 66
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=96.70 E-value=0.055 Score=52.67 Aligned_cols=224 Identities=12% Similarity=0.077 Sum_probs=115.3
Q ss_pred eEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcc-cccceeEEecCCcEEEEcCccCCeEEEE-cCCCCCC
Q 043369 112 ALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISP-RWYASNQILPNGKIIVVGGRFQFTYEFI-PRTSDSD 189 (526)
Q Consensus 112 ~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~-R~y~s~~~L~dG~v~viGG~~~~~~E~y-P~~~~~~ 189 (526)
.+-+||+++++|+.+ ..+++||.. +..-.. .+... ..-.++...++|+.++.|+.+. ++.+| ..++.
T Consensus 20 ~fsp~~~~l~s~~~d---g~v~lWd~~-~~~~~~----~~~~~~~~v~~~~~~~~~~~l~s~s~d~-~i~vwd~~~~~-- 88 (304)
T 2ynn_A 20 DFHPTEPWVLTTLYS---GRVELWNYE-TQVEVR----SIQVTETPVRAGKFIARKNWIIVGSDDF-RIRVFNYNTGE-- 88 (304)
T ss_dssp EECSSSSEEEEEETT---SEEEEEETT-TTEEEE----EEECCSSCEEEEEEEGGGTEEEEEETTS-EEEEEETTTCC--
T ss_pred EECCCCCEEEEEcCC---CcEEEEECC-CCceeE----EeeccCCcEEEEEEeCCCCEEEEECCCC-EEEEEECCCCc--
Confidence 345789999999863 578999987 543221 11111 1122445567899999888664 57777 54431
Q ss_pred CcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEccc--eEEEeccCCeEEEeccCCCCCCCCccCCCCceeecc
Q 043369 190 RKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDR--AILLDYVNNRVMKNYPVMPGGISRNYPSTGSSVLLP 267 (526)
Q Consensus 190 ~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~~--~~~yDp~t~~w~~~~p~~p~~~~r~y~~~g~~v~lp 267 (526)
.-..+.. .. + ... .+...+++++++.|+.+ ..+||..++.-... .+... .+...-+.
T Consensus 89 --~~~~~~~--h~-~------~v~-~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~--~~~~h-------~~~v~~v~ 147 (304)
T 2ynn_A 89 --KVVDFEA--HP-D------YIR-SIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQ--TFEGH-------EHFVMCVA 147 (304)
T ss_dssp --EEEEEEC--CS-S------CEE-EEEECSSSSEEEEEETTSCEEEEEGGGTTEEEE--EECCC-------CSCEEEEE
T ss_pred --EEEEEeC--CC-C------cEE-EEEEcCCCCEEEEECCCCeEEEEECCCCcchhh--hhccc-------CCcEEEEE
Confidence 1111111 00 0 011 23345789988888754 67899887632211 11111 01111111
Q ss_pred cccccccccccCCCCCccCcEEEEEcCCCCCCCchhhhhhcccccccceEEEEeecCCCCceecccCccccccceEE--e
Q 043369 268 VNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTITAQNPKWEMEEMPLNRVMGDMIL--L 345 (526)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M~~~R~~~~~vv--L 345 (526)
..| .++++++.|+.+. ++..+|+.......... ....+....... .
T Consensus 148 ~~p--------------~~~~~l~sgs~D~-----------------~v~iwd~~~~~~~~~~~-~~~~~~v~~~~~~~~ 195 (304)
T 2ynn_A 148 FNP--------------KDPSTFASGCLDR-----------------TVKVWSLGQSTPNFTLT-TGQERGVNYVDYYPL 195 (304)
T ss_dssp ECT--------------TCTTEEEEEETTS-----------------EEEEEETTCSSCSEEEE-CCCTTCEEEEEECCS
T ss_pred ECC--------------CCCCEEEEEeCCC-----------------eEEEEECCCCCccceec-cCCcCcEEEEEEEEc
Confidence 111 2567788887651 35567764322222211 111111111112 2
Q ss_pred CCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCcEe-ecCCCCccccccccceecCCCEEEEecCCCC
Q 043369 346 PTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINRFR-ILSPSLIPRLYHSTAHLLSDGRVLVGGSNPN 415 (526)
Q Consensus 346 pdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~Wt-~~a~~~~~R~yhs~a~LlpdG~V~v~GG~~~ 415 (526)
++++.++.|+.+ + ++.+||..+.+-. .+.. ....-.....-|++++++.|+...
T Consensus 196 ~~~~~l~s~s~D-~------------~i~iWd~~~~~~~~~~~~---h~~~v~~~~~~p~~~~l~s~s~Dg 250 (304)
T 2ynn_A 196 PDKPYMITASDD-L------------TIKIWDYQTKSCVATLEG---HMSNVSFAVFHPTLPIIISGSEDG 250 (304)
T ss_dssp TTCCEEEEEETT-S------------EEEEEETTTTEEEEEEEC---CSSCEEEEEECSSSSEEEEEETTS
T ss_pred CCCCEEEEEcCC-C------------eEEEEeCCCCccceeeCC---CCCCEEEEEECCCCCEEEEEcCCC
Confidence 588888888765 2 5789998876421 1111 011112344578999999998643
No 67
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.70 E-value=0.17 Score=49.76 Aligned_cols=140 Identities=8% Similarity=-0.013 Sum_probs=70.7
Q ss_pred EEEEeCCCCcEEeCcc---C-CccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCC-----CcccccCCCCC-cccc
Q 043369 87 AVEFDPITRKVRPLTI---Q-TDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDC-----DWEEDHQNGLI-SPRW 156 (526)
Q Consensus 87 ~~~yDp~t~~w~~~~~---~-~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~-----~W~~~~~~~m~-~~R~ 156 (526)
..+||..++.++.+.. . +.........-++|+++++|+.+ ..+++||.. .. .+... ..+. ....
T Consensus 36 i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D---~~v~iw~~~-~~~~~~~~~~~~--~~~~~h~~~ 109 (330)
T 2hes_X 36 IKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFD---STVSIWAKE-ESADRTFEMDLL--AIIEGHENE 109 (330)
T ss_dssp EEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETT---SCEEEEEC--------CCCEEE--EEEC----C
T ss_pred EEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCC---CcEEEEEcc-cCcCccccceeE--EEEcCCCCc
Confidence 5667776654433221 1 22222223456789999999874 468888874 21 12211 1111 1111
Q ss_pred cceeEEecCCcEEEEcCccCCeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEccc--eE
Q 043369 157 YASNQILPNGKIIVVGGRFQFTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDR--AI 233 (526)
Q Consensus 157 y~s~~~L~dG~v~viGG~~~~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~~--~~ 233 (526)
-.+++.-+||+.++.|+.++ ++.+| ..... ..+..+..+..... ... .+...++|++++.|+.+ ..
T Consensus 110 V~~v~~sp~g~~las~s~D~-~v~iwd~~~~~---~~~~~~~~~~~h~~------~v~-~v~~~p~~~~l~s~s~D~~i~ 178 (330)
T 2hes_X 110 VKGVAWSNDGYYLATCSRDK-SVWIWETDESG---EEYECISVLQEHSQ------DVK-HVIWHPSEALLASSSYDDTVR 178 (330)
T ss_dssp EEEEEECTTSCEEEEEETTS-CEEEEECCTTC---CCCEEEEEECCCSS------CEE-EEEECSSSSEEEEEETTSCEE
T ss_pred EEEEEECCCCCEEEEEeCCC-EEEEEeccCCC---CCeEEEEEeccCCC------ceE-EEEECCCCCEEEEEcCCCeEE
Confidence 12344446899998888764 46677 42210 12222211111000 001 12234689999988754 67
Q ss_pred EEeccCCeEE
Q 043369 234 LLDYVNNRVM 243 (526)
Q Consensus 234 ~yDp~t~~w~ 243 (526)
+||..++.|.
T Consensus 179 iW~~~~~~~~ 188 (330)
T 2hes_X 179 IWKDYDDDWE 188 (330)
T ss_dssp EEEEETTEEE
T ss_pred EEECCCCCee
Confidence 8888877654
No 68
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=96.69 E-value=0.19 Score=50.08 Aligned_cols=230 Identities=15% Similarity=0.176 Sum_probs=118.1
Q ss_pred eEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEecCCcEEEEcCccCCeEEEEcCC-CCCCC
Q 043369 112 ALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPNGKIIVVGGRFQFTYEFIPRT-SDSDR 190 (526)
Q Consensus 112 ~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~dG~v~viGG~~~~~~E~yP~~-~~~~~ 190 (526)
..-+||+.+++||.+ ..+++||.. +...... -... ..+-.+++.-++|+.++.||.++ .+.+|+.. +.- .
T Consensus 71 ~~s~d~~~l~s~s~D---g~v~vWd~~-~~~~~~~--~~~~-~~~v~~~~~sp~g~~lasg~~d~-~i~v~~~~~~~~-~ 141 (354)
T 2pbi_B 71 DWCKDKRRIVSSSQD---GKVIVWDSF-TTNKEHA--VTMP-CTWVMACAYAPSGCAIACGGLDN-KCSVYPLTFDKN-E 141 (354)
T ss_dssp EECTTSSEEEEEETT---SEEEEEETT-TCCEEEE--EECS-SSCCCEEEECTTSSEEEEESTTS-EEEEEECCCCTT-C
T ss_pred EECCCCCEEEEEeCC---CeEEEEECC-CCCcceE--EecC-CCCEEEEEECCCCCEEEEeeCCC-CEEEEEEecccc-c
Confidence 345689999999874 578999976 4433221 1111 23344566677999999999875 45666221 100 0
Q ss_pred cceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEcc--ceEEEeccCCeEEEeccCCCCCCCCccCCCCceeeccc
Q 043369 191 KILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFAND--RAILLDYVNNRVMKNYPVMPGGISRNYPSTGSSVLLPV 268 (526)
Q Consensus 191 ~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~--~~~~yDp~t~~w~~~~p~~p~~~~r~y~~~g~~v~lp~ 268 (526)
........+.. +. ...+ .+...++++.++.|+. ...+||..+++..+.+. .. .+....+.+
T Consensus 142 ~~~~~~~~~~~--h~----~~v~-~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~---~h-------~~~v~~~~~ 204 (354)
T 2pbi_B 142 NMAAKKKSVAM--HT----NYLS-ACSFTNSDMQILTASGDGTCALWDVESGQLLQSFH---GH-------GADVLCLDL 204 (354)
T ss_dssp CSGGGCEEEEE--CS----SCEE-EEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE---CC-------SSCEEEEEE
T ss_pred cccccceeeec--cC----CcEE-EEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEc---CC-------CCCeEEEEE
Confidence 00000000000 00 0111 1233457777777764 46789998877543321 11 011111111
Q ss_pred ccccccccccCCCCCccCcEEEEEcCCCCCCCchhhhhhcccccccceEEEEeecCCCCceec-ccCccccccceEEeCC
Q 043369 269 NLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTITAQNPKWEME-EMPLNRVMGDMILLPT 347 (526)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvLpd 347 (526)
.+ ..+++.++.|+.+. ++..+|+.. .+.... .-..... .+....|+
T Consensus 205 ~~-------------~~~g~~l~sgs~Dg-----------------~v~~wd~~~--~~~~~~~~~h~~~v-~~v~~~p~ 251 (354)
T 2pbi_B 205 AP-------------SETGNTFVSGGCDK-----------------KAMVWDMRS--GQCVQAFETHESDV-NSVRYYPS 251 (354)
T ss_dssp CC-------------CSSCCEEEEEETTS-----------------CEEEEETTT--CCEEEEECCCSSCE-EEEEECTT
T ss_pred Ee-------------CCCCCEEEEEeCCC-----------------eEEEEECCC--CcEEEEecCCCCCe-EEEEEeCC
Confidence 11 12567888888652 345677642 222211 1111222 12245689
Q ss_pred CcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCcEe-ecCCCCccccccccceecCCCEEEEecCCC
Q 043369 348 GDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINRFR-ILSPSLIPRLYHSTAHLLSDGRVLVGGSNP 414 (526)
Q Consensus 348 G~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~Wt-~~a~~~~~R~yhs~a~LlpdG~V~v~GG~~ 414 (526)
|+.++.|+.+ + ++.+||..+++-. ...... ..........-|||+.+++|+..
T Consensus 252 ~~~l~s~s~D-~------------~v~lwd~~~~~~~~~~~~~~-~~~~~~~~~~s~~g~~l~~g~~d 305 (354)
T 2pbi_B 252 GDAFASGSDD-A------------TCRLYDLRADREVAIYSKES-IIFGASSVDFSLSGRLLFAGYND 305 (354)
T ss_dssp SSEEEEEETT-S------------CEEEEETTTTEEEEEECCTT-CCSCEEEEEECTTSSEEEEEETT
T ss_pred CCEEEEEeCC-C------------eEEEEECCCCcEEEEEcCCC-cccceeEEEEeCCCCEEEEEECC
Confidence 9999999865 2 5688998877422 111111 11112234456899999999854
No 69
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.69 E-value=0.041 Score=54.26 Aligned_cols=243 Identities=11% Similarity=0.073 Sum_probs=117.1
Q ss_pred eEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEe-cC--CcEEEEcCccCCeEEEE-cCCCC
Q 043369 112 ALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQIL-PN--GKIIVVGGRFQFTYEFI-PRTSD 187 (526)
Q Consensus 112 ~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L-~d--G~v~viGG~~~~~~E~y-P~~~~ 187 (526)
+.-++|+.+++|+.+ ..+.+||.. ..++... ..+......-..... ++ ++.++.|+.++ .+.+| ..++
T Consensus 18 ~~s~~~~~l~~~~~d---g~i~iw~~~-~~~~~~~--~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg-~v~iwd~~~~- 89 (379)
T 3jrp_A 18 VLDYYGKRLATCSSD---KTIKIFEVE-GETHKLI--DTLTGHEGPVWRVDWAHPKFGTILASCSYDG-KVLIWKEENG- 89 (379)
T ss_dssp EECSSSSEEEEEETT---SCEEEEEEE-TTEEEEE--EEECCCSSCEEEEEECCGGGCSEEEEEETTS-CEEEEEEETT-
T ss_pred EEcCCCCEEEEEECC---CcEEEEecC-CCcceee--eEecCCCCcEEEEEeCCCCCCCEEEEeccCC-EEEEEEcCCC-
Confidence 345688999998763 457788865 4455443 223222211222233 34 88999888764 46666 4443
Q ss_pred CCCcceeecCCccccCCCCCCCCCCcceEEEecC--CcEEEEEccc--eEEEeccCCeEEEeccCCCCCCCCccCCCCce
Q 043369 188 SDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTD--GNLFIFANDR--AILLDYVNNRVMKNYPVMPGGISRNYPSTGSS 263 (526)
Q Consensus 188 ~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~d--G~Iy~~Gg~~--~~~yDp~t~~w~~~~p~~p~~~~r~y~~~g~~ 263 (526)
.+.....+.... .... .+...++ |++++.|+.+ ..+||..++...... .+... ....
T Consensus 90 ----~~~~~~~~~~~~------~~v~-~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~-~~~~~-------~~~v 150 (379)
T 3jrp_A 90 ----RWSQIAVHAVHS------ASVN-SVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPI-IIDAH-------AIGV 150 (379)
T ss_dssp ----EEEEEEEECCCS------SCEE-EEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEE-EEECC-------TTCE
T ss_pred ----ceeEeeeecCCC------cceE-EEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeE-EecCC-------CCce
Confidence 332221111100 0111 1233456 8888888754 567888765311000 00000 0101
Q ss_pred eecccccccccccccCCCCCccCcEEEEEcCCCCCCCchhhhhhcccccccceEEEEeecCCCCceec-ccCcccc-ccc
Q 043369 264 VLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTITAQNPKWEME-EMPLNRV-MGD 341 (526)
Q Consensus 264 v~lp~~~~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~-~~~ 341 (526)
..+...|.... .........+++.+++|+.+. .+..||+......|... .+..... -.+
T Consensus 151 ~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~dg-----------------~i~i~d~~~~~~~~~~~~~~~~h~~~v~~ 211 (379)
T 3jrp_A 151 NSASWAPATIE--EDGEHNGTKESRKFVTGGADN-----------------LVKIWKYNSDAQTYVLESTLEGHSDWVRD 211 (379)
T ss_dssp EEEEECCCC------------CTTCEEEEEETTS-----------------CEEEEEEETTTTEEEEEEEECCCSSCEEE
T ss_pred EEEEEcCcccc--ccccccCCCCCCEEEEEeCCC-----------------eEEEEEecCCCcceeeEEEEecccCcEeE
Confidence 11111100000 000000001577788887641 35678886544445543 3332111 123
Q ss_pred eEEeCC---CcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCc----EeecCCCCccccccccceecCCCEEEEecCCC
Q 043369 342 MILLPT---GDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINR----FRILSPSLIPRLYHSTAHLLSDGRVLVGGSNP 414 (526)
Q Consensus 342 ~vvLpd---G~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~----Wt~~a~~~~~R~yhs~a~LlpdG~V~v~GG~~ 414 (526)
...-|+ +++++.|+.+ | .+.+||..+.+ ............ -.....-|||+.+++|+..
T Consensus 212 ~~~sp~~~~~~~l~s~~~d-g------------~i~iwd~~~~~~~~~~~~~~~~~~~~~-v~~~~~s~~g~~l~~~~~d 277 (379)
T 3jrp_A 212 VAWSPTVLLRSYLASVSQD-R------------TCIIWTQDNEQGPWKKTLLKEEKFPDV-LWRASWSLSGNVLALSGGD 277 (379)
T ss_dssp EEECCCCSSSEEEEEEETT-S------------CEEEEEESSTTSCCEEEESSSSCCSSC-EEEEEECSSSCCEEEEESS
T ss_pred EEECCCCCCCCeEEEEeCC-C------------EEEEEeCCCCCccceeeeeccccCCCc-EEEEEEcCCCCEEEEecCC
Confidence 345688 8999998865 2 46889988763 222221111111 1223456899999988863
No 70
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=96.69 E-value=0.49 Score=45.63 Aligned_cols=115 Identities=12% Similarity=0.018 Sum_probs=55.6
Q ss_pred ceEcCCCcEEEEcCCCCCccEEEEEcCCC-CCCcccccCCCCCcccccceeEEecCCcEEEEcCccCCeEEEE-cCCCCC
Q 043369 111 GALLANGVLVQTGGYRLGERVVRYLKPCS-DCDWEEDHQNGLISPRWYASNQILPNGKIIVVGGRFQFTYEFI-PRTSDS 188 (526)
Q Consensus 111 ~~~l~~G~l~v~GG~~~g~~~v~~ydp~~-t~~W~~~~~~~m~~~R~y~s~~~L~dG~v~viGG~~~~~~E~y-P~~~~~ 188 (526)
.+.-+||+.+++++..+ ..+.+|+... +.++... ..+.....-..++.-+||+.+++++.....+.+| ...+
T Consensus 43 ~~~spdg~~l~~~~~~~--~~v~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~-- 116 (343)
T 1ri6_A 43 MVVSPDKRYLYVGVRPE--FRVLAYRIAPDDGALTFA--AESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDG-- 116 (343)
T ss_dssp EEECTTSSEEEEEETTT--TEEEEEEECTTTCCEEEE--EEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETT--
T ss_pred EEECCCCCEEEEeecCC--CeEEEEEecCCCCceeec--cccccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCC--
Confidence 44567898666665532 4566665430 4455543 2222222222344556888655555544556777 4221
Q ss_pred CCcceeecCCccccCCCCCCCCCCcce-EEEecCCc-EEEEE-c-cceEEEeccC-CeE
Q 043369 189 DRKILYQLPFLKETMHSPKIPNNLYPF-LHLSTDGN-LFIFA-N-DRAILLDYVN-NRV 242 (526)
Q Consensus 189 ~~~~w~~~p~l~~~~~~~~~~~~~yp~-~~~~~dG~-Iy~~G-g-~~~~~yDp~t-~~w 242 (526)
............ ..+. +...+||+ ||+.+ + ....+||..+ ++.
T Consensus 117 --~~~~~~~~~~~~---------~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~ 164 (343)
T 1ri6_A 117 --LPVGVVDVVEGL---------DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHL 164 (343)
T ss_dssp --EEEEEEEEECCC---------TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCE
T ss_pred --ccccccccccCC---------CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCce
Confidence 011111111100 0122 23566886 55554 2 3567899887 554
No 71
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=96.69 E-value=0.1 Score=61.03 Aligned_cols=246 Identities=11% Similarity=0.021 Sum_probs=126.2
Q ss_pred EEEEeCCCCcEEeCccCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEecCC
Q 043369 87 AVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPNG 166 (526)
Q Consensus 87 ~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~dG 166 (526)
..+||..+++.......+..........+||+.+++|+.+ ..+.+||.. +.+.... ......-.+++..+++
T Consensus 985 i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d---g~i~vwd~~-~~~~~~~----~~~~~~v~~~~~~~~~ 1056 (1249)
T 3sfz_A 985 IKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSED---SVIQVWNWQ-TGDYVFL----QAHQETVKDFRLLQDS 1056 (1249)
T ss_dssp CEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSS---SBEEEEETT-TTEEECC----BCCSSCEEEEEECSSS
T ss_pred EEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCC---CEEEEEECC-CCceEEE----ecCCCcEEEEEEcCCC
Confidence 5678887766544322333333344567799999999863 478899987 6554433 1122223345555566
Q ss_pred cEEEEcCccCCeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEccc--eEEEeccCCeEE
Q 043369 167 KIIVVGGRFQFTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDR--AILLDYVNNRVM 243 (526)
Q Consensus 167 ~v~viGG~~~~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~~--~~~yDp~t~~w~ 243 (526)
++ +.|+.+ ..+.+| ..++. .-..+..- . .... .+...+||+.++.|+.+ ..+||..+.+-.
T Consensus 1057 ~l-~~~~~d-g~v~vwd~~~~~----~~~~~~~~--~-------~~v~-~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~ 1120 (1249)
T 3sfz_A 1057 RL-LSWSFD-GTVKVWNVITGR----IERDFTCH--Q-------GTVL-SCAISSDATKFSSTSADKTAKIWSFDLLSPL 1120 (1249)
T ss_dssp EE-EEEESS-SEEEEEETTTTC----CCEEEECC--S-------SCCC-CEEECSSSSSCEEECCSSCCCEECSSSSSCS
T ss_pred cE-EEEECC-CcEEEEECCCCc----eeEEEccc--C-------CcEE-EEEECCCCCEEEEEcCCCcEEEEECCCccee
Confidence 55 455544 356777 44331 11111100 0 0111 23456789988888754 567887765521
Q ss_pred EeccCCCCCCCCccCCCCceeecccccccccccccCCCCCccCcEEEEEcCCCCCCCchhhhhhcccccccceEEEEeec
Q 043369 244 KNYPVMPGGISRNYPSTGSSVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTITA 323 (526)
Q Consensus 244 ~~~p~~p~~~~r~y~~~g~~v~lp~~~~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~ 323 (526)
..+... .+...-+... .+++++++|+.+. ++..+|+..
T Consensus 1121 ---~~l~~h-------~~~v~~~~~s---------------~dg~~lat~~~dg-----------------~i~vwd~~~ 1158 (1249)
T 3sfz_A 1121 ---HELKGH-------NGCVRCSAFS---------------LDGILLATGDDNG-----------------EIRIWNVSD 1158 (1249)
T ss_dssp ---BCCCCC-------SSCEEEEEEC---------------SSSSEEEEEETTS-----------------CCCEEESSS
T ss_pred ---eeeccC-------CCcEEEEEEC---------------CCCCEEEEEeCCC-----------------EEEEEECCC
Confidence 122211 1111111111 2778888887652 234577643
Q ss_pred CCCCceeccc-------CccccccceEEeCCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCcEeecCCCCcccccc
Q 043369 324 QNPKWEMEEM-------PLNRVMGDMILLPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINRFRILSPSLIPRLYH 396 (526)
Q Consensus 324 ~~~~W~~~~M-------~~~R~~~~~vvLpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~Wt~~a~~~~~R~yh 396 (526)
.....+..+. .....-.+...-|||+.++.+| | .+.+||..+.+-...-...... -
T Consensus 1159 ~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~---g------------~v~vwd~~~g~~~~~~~~~~~~--i 1221 (1249)
T 3sfz_A 1159 GQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAG---G------------YLKWWNVATGDSSQTFYTNGTN--L 1221 (1249)
T ss_dssp SCCCCCCCCCC-------CCSCCCEEEECTTSSCEEEES---S------------SEEEBCSSSCBCCCCCCCSSCC--C
T ss_pred CceEEEeccccccccccccCceEEEEEECCCCCEEEECC---C------------eEEEEECCCCceeeeeeccCCc--c
Confidence 2211111111 1111112334568999998876 2 4678998776432211111111 1
Q ss_pred ccceecCCCEEEEecCCCC
Q 043369 397 STAHLLSDGRVLVGGSNPN 415 (526)
Q Consensus 397 s~a~LlpdG~V~v~GG~~~ 415 (526)
.....-|||+.+++|+...
T Consensus 1222 ~~~~~s~dg~~l~~~~~dg 1240 (1249)
T 3sfz_A 1222 KKIHVSPDFRTYVTVDNLG 1240 (1249)
T ss_dssp CCCEECSSSCCEEEECTTC
T ss_pred cEEEECCCCCEEEEecCCc
Confidence 2244568999999888643
No 72
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.65 E-value=0.16 Score=56.22 Aligned_cols=151 Identities=11% Similarity=0.061 Sum_probs=84.7
Q ss_pred EEEecCCeEEEEecccCCCCCccCCCCccccCccccCCCCcceEEEEeCCCCcEEeCccCCccccccceEcCCCcEEEEc
Q 043369 44 MALLPNDRIIAFDRSHFGPSNITLPQGKCIKGVELETSDCYAHAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTG 123 (526)
Q Consensus 44 ~a~l~~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~v~G 123 (526)
.+.-|+|+.++.++.+ | ...+||..+++....-..+..........++|+.+++|
T Consensus 19 i~~sp~~~~la~~~~~----------g---------------~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 73 (814)
T 3mkq_A 19 IDFHPTEPWVLTTLYS----------G---------------RVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVG 73 (814)
T ss_dssp EEECSSSSEEEEEETT----------S---------------EEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEE
T ss_pred EEECCCCCEEEEEeCC----------C---------------EEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEE
Confidence 3445788888877642 2 46789988876543322333333345567799999999
Q ss_pred CCCCCccEEEEEcCCCCCCcccccCCCCC-cccccceeEEecCCcEEEEcCccCCeEEEE-cCCCCCCCcceeecCCccc
Q 043369 124 GYRLGERVVRYLKPCSDCDWEEDHQNGLI-SPRWYASNQILPNGKIIVVGGRFQFTYEFI-PRTSDSDRKILYQLPFLKE 201 (526)
Q Consensus 124 G~~~g~~~v~~ydp~~t~~W~~~~~~~m~-~~R~y~s~~~L~dG~v~viGG~~~~~~E~y-P~~~~~~~~~w~~~p~l~~ 201 (526)
+.. ..+.+||.. +.+.... +. ....-.+++.-+||+.+++|+.++ .+.+| ..++ +.....+..
T Consensus 74 ~~d---g~i~vw~~~-~~~~~~~----~~~~~~~v~~~~~s~~~~~l~~~~~dg-~i~vw~~~~~------~~~~~~~~~ 138 (814)
T 3mkq_A 74 SDD---FRIRVFNYN-TGEKVVD----FEAHPDYIRSIAVHPTKPYVLSGSDDL-TVKLWNWENN------WALEQTFEG 138 (814)
T ss_dssp ETT---SEEEEEETT-TCCEEEE----EECCSSCEEEEEECSSSSEEEEEETTS-EEEEEEGGGT------SEEEEEEEC
T ss_pred eCC---CeEEEEECC-CCcEEEE----EecCCCCEEEEEEeCCCCEEEEEcCCC-EEEEEECCCC------ceEEEEEcC
Confidence 863 578999987 6554322 21 111122344556898888887653 56677 4332 211111111
Q ss_pred cCCCCCCCCCCcceEEEec-CCcEEEEEccc--eEEEeccCCe
Q 043369 202 TMHSPKIPNNLYPFLHLST-DGNLFIFANDR--AILLDYVNNR 241 (526)
Q Consensus 202 ~~~~~~~~~~~yp~~~~~~-dG~Iy~~Gg~~--~~~yDp~t~~ 241 (526)
.. .... .+...+ +|++++.|+.+ ..+||..+.+
T Consensus 139 ~~------~~v~-~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~ 174 (814)
T 3mkq_A 139 HE------HFVM-CVAFNPKDPSTFASGCLDRTVKVWSLGQST 174 (814)
T ss_dssp CS------SCEE-EEEEETTEEEEEEEEETTSEEEEEETTCSS
T ss_pred CC------CcEE-EEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 00 0111 122345 78888888753 6788876544
No 73
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=96.64 E-value=0.32 Score=52.45 Aligned_cols=136 Identities=10% Similarity=0.018 Sum_probs=70.5
Q ss_pred eEEEEeCCCCcEEe-Ccc------CCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccc
Q 043369 86 HAVEFDPITRKVRP-LTI------QTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYA 158 (526)
Q Consensus 86 ~~~~yDp~t~~w~~-~~~------~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~ 158 (526)
...+||..+++... +.. .+.......+..+||+.++.|+.+ ..++++|.. +.+.... -.....-...
T Consensus 213 ~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D---~~v~lWd~~-~~~~~~~--~~~~~~~~~~ 286 (611)
T 1nr0_A 213 TIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASAD---KTIKIWNVA-TLKVEKT--IPVGTRIEDQ 286 (611)
T ss_dssp CEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETT---SEEEEEETT-TTEEEEE--EECCSSGGGC
T ss_pred cEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCC---CeEEEEeCC-CCceeee--ecCCCCccce
Confidence 46788887776543 211 232223334556799999999864 589999987 5544322 0111110011
Q ss_pred eeEEecCCcEEEEcCccCCeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEccc--eEEE
Q 043369 159 SNQILPNGKIIVVGGRFQFTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDR--AILL 235 (526)
Q Consensus 159 s~~~L~dG~v~viGG~~~~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~~--~~~y 235 (526)
......+++.++.++.++ .+.+| +... .... .+.... .... .+...+||+.++.|+.+ ..+|
T Consensus 287 ~~~~~~~~~~l~s~s~d~-~i~~~~~~~~-----~~~~--~~~gh~------~~v~-~l~~spdg~~l~s~s~D~~v~~W 351 (611)
T 1nr0_A 287 QLGIIWTKQALVSISANG-FINFVNPELG-----SIDQ--VRYGHN------KAIT-ALSSSADGKTLFSADAEGHINSW 351 (611)
T ss_dssp EEEEEECSSCEEEEETTC-CEEEEETTTT-----EEEE--EECCCS------SCEE-EEEECTTSSEEEEEETTSCEEEE
T ss_pred eEEEEEcCCEEEEEeCCC-cEEEEeCCCC-----Ccce--EEcCCC------CCEE-EEEEeCCCCEEEEEeCCCcEEEE
Confidence 112222677777777654 45666 4433 1110 011100 0111 12345688888888753 5678
Q ss_pred eccCCeE
Q 043369 236 DYVNNRV 242 (526)
Q Consensus 236 Dp~t~~w 242 (526)
|..+++.
T Consensus 352 d~~~~~~ 358 (611)
T 1nr0_A 352 DISTGIS 358 (611)
T ss_dssp ETTTCCE
T ss_pred ECCCCce
Confidence 8776554
No 74
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=96.64 E-value=0.55 Score=46.83 Aligned_cols=92 Identities=8% Similarity=-0.016 Sum_probs=49.5
Q ss_pred eEEEEeCCC----C-cEEeCccCCccccccceEcCC-CcEEEEcCCCCCccEEEEEcCCCCCC------c-ccccCCCC-
Q 043369 86 HAVEFDPIT----R-KVRPLTIQTDTWCSSGALLAN-GVLVQTGGYRLGERVVRYLKPCSDCD------W-EEDHQNGL- 151 (526)
Q Consensus 86 ~~~~yDp~t----~-~w~~~~~~~~~fc~~~~~l~~-G~l~v~GG~~~g~~~v~~ydp~~t~~------W-~~~~~~~m- 151 (526)
...+||..+ . ....+.. +..........++ ++++++|+.. ..+.+||.. +.+ - ... ...
T Consensus 90 ~v~vw~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~~d---g~v~iwd~~-~~~~~~~~~~~~~~--~~~~ 162 (416)
T 2pm9_A 90 SLELYSTNEANNAINSMARFSN-HSSSVKTVKFNAKQDNVLASGGNN---GEIFIWDMN-KCTESPSNYTPLTP--GQSM 162 (416)
T ss_dssp CEEEECCSSTTSCCCEEEECCC-SSSCCCEEEECSSSTTBEEEECSS---SCEEBCBTT-TTSSCTTTCCCBCC--CCSC
T ss_pred eEEEeecccccccccchhhccC-CccceEEEEEcCCCCCEEEEEcCC---CeEEEEECC-CCcccccccccccc--cccc
Confidence 366788876 2 2223322 2222223345566 8899998863 468899987 443 1 111 111
Q ss_pred CcccccceeEEecC-CcEEEEcCccCCeEEEE-cCC
Q 043369 152 ISPRWYASNQILPN-GKIIVVGGRFQFTYEFI-PRT 185 (526)
Q Consensus 152 ~~~R~y~s~~~L~d-G~v~viGG~~~~~~E~y-P~~ 185 (526)
.....-.+++..++ +++++.|+.++ .+.+| ..+
T Consensus 163 ~~~~~v~~~~~~~~~~~~l~~~~~dg-~v~iwd~~~ 197 (416)
T 2pm9_A 163 SSVDEVISLAWNQSLAHVFASAGSSN-FASIWDLKA 197 (416)
T ss_dssp CSSCCCCEEEECSSCTTEEEEESSSS-CEEEEETTT
T ss_pred CCCCCeeEEEeCCCCCcEEEEEcCCC-CEEEEECCC
Confidence 11222234455556 78888888764 46667 443
No 75
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=96.62 E-value=0.43 Score=45.38 Aligned_cols=220 Identities=13% Similarity=0.165 Sum_probs=107.6
Q ss_pred EcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccC-CCCCcccccceeEEe--cCCcEEEEcCccCCeEEEEcCCCCCC
Q 043369 113 LLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQ-NGLISPRWYASNQIL--PNGKIIVVGGRFQFTYEFIPRTSDSD 189 (526)
Q Consensus 113 ~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~-~~m~~~R~y~s~~~L--~dG~v~viGG~~~~~~E~yP~~~~~~ 189 (526)
+-++|++|+.... ...+.+||+. ......... ..-...-.++....+ .+|++||.+......+.+|..+..
T Consensus 37 ~~~~g~l~v~~~~---~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~g~-- 110 (286)
T 1q7f_A 37 VNAQNDIIVADTN---NHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQ-- 110 (286)
T ss_dssp ECTTCCEEEEEGG---GTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTTSC--
T ss_pred ECCCCCEEEEECC---CCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEECCCCc--
Confidence 3457888887543 2578899986 433222200 000001123444444 589999987542345666632221
Q ss_pred CcceeecCCccccCCCCCCCCCCcceE-EEecCCcEEEEEc--cceEEEeccCCeEEEeccCCCCCCCCccCCCCceeec
Q 043369 190 RKILYQLPFLKETMHSPKIPNNLYPFL-HLSTDGNLFIFAN--DRAILLDYVNNRVMKNYPVMPGGISRNYPSTGSSVLL 266 (526)
Q Consensus 190 ~~~w~~~p~l~~~~~~~~~~~~~yp~~-~~~~dG~Iy~~Gg--~~~~~yDp~t~~w~~~~p~~p~~~~r~y~~~g~~v~l 266 (526)
....+... ....|.. .+.++|+||+... ....+||+...... .+.. +.. -..| .+.++
T Consensus 111 --~~~~~~~~----------~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~-~~~~-~~~--~~~p-~~i~~-- 171 (286)
T 1q7f_A 111 --FVRKFGAT----------ILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLH-KFGC-SKH--LEFP-NGVVV-- 171 (286)
T ss_dssp --EEEEECTT----------TCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEE-EEEC-TTT--CSSE-EEEEE--
T ss_pred --EEEEecCc----------cCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCCEEE-EeCC-CCc--cCCc-EEEEE--
Confidence 11111110 0113443 3446899998764 35778898755433 2321 111 0111 11111
Q ss_pred ccccccccccccCCCCCccCcEEEEEcCCCCCCCchhhhhhcccccccceEEEEeecCCCCc--eec---ccCccccccc
Q 043369 267 PVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTITAQNPKW--EME---EMPLNRVMGD 341 (526)
Q Consensus 267 p~~~~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W--~~~---~M~~~R~~~~ 341 (526)
. .+++||+....+ ..+.+||+. ... +.. .+..++ +
T Consensus 172 --~---------------~~g~l~v~~~~~-----------------~~i~~~~~~---g~~~~~~~~~g~~~~p~---~ 211 (286)
T 1q7f_A 172 --N---------------DKQEIFISDNRA-----------------HCVKVFNYE---GQYLRQIGGEGITNYPI---G 211 (286)
T ss_dssp --C---------------SSSEEEEEEGGG-----------------TEEEEEETT---CCEEEEESCTTTSCSEE---E
T ss_pred --C---------------CCCCEEEEECCC-----------------CEEEEEcCC---CCEEEEEccCCccCCCc---E
Confidence 1 268888875422 245677753 222 111 122222 2
Q ss_pred eEEeCCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCcEeecCC-CCccccccccceecCCCEEEEec
Q 043369 342 MILLPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINRFRILSP-SLIPRLYHSTAHLLSDGRVLVGG 411 (526)
Q Consensus 342 ~vvLpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~Wt~~a~-~~~~R~yhs~a~LlpdG~V~v~G 411 (526)
.++-+||+|||...... ..+.+||++...-..+.. ....+ -++ ..+.+||++||+.
T Consensus 212 i~~d~~G~l~v~~~~~~------------~~i~~~~~~g~~~~~~~~~~~~~~-~~~-i~~~~~g~l~vs~ 268 (286)
T 1q7f_A 212 VGINSNGEILIADNHNN------------FNLTIFTQDGQLISALESKVKHAQ-CFD-VALMDDGSVVLAS 268 (286)
T ss_dssp EEECTTCCEEEEECSSS------------CEEEEECTTSCEEEEEEESSCCSC-EEE-EEEETTTEEEEEE
T ss_pred EEECCCCCEEEEeCCCC------------EEEEEECCCCCEEEEEcccCCCCc-cee-EEECCCCcEEEEC
Confidence 33458999999875321 146889987653332221 11111 123 3446899999984
No 76
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=96.58 E-value=0.31 Score=51.40 Aligned_cols=243 Identities=12% Similarity=0.116 Sum_probs=119.2
Q ss_pred eEEEEeCCCCcEEeCccCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEecC
Q 043369 86 HAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPN 165 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~d 165 (526)
...+||........+..... .....++.+||+.+++|+.. ..++++|.. ...-... ... ...-.+++.-+|
T Consensus 285 ~i~~w~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~t~~~d---~~i~~w~~~-~~~~~~~--~~~--~~~v~~~~~s~~ 355 (577)
T 2ymu_A 285 TVKLWNRNGQLLQTLTGHSS-SVWGVAFSPDGQTIASASDD---KTVKLWNRN-GQHLQTL--TGH--SSSVWGVAFSPD 355 (577)
T ss_dssp CEEEEETTSCEEEEECCCSS-CEEEEEECTTSSEEEEEETT---SCEEEEETT-SCEEEEE--CCC--SSCEEEEEECTT
T ss_pred EEEEEeCCCcEEEEEecCCC-CeEEEEECCCCCEEEEEeCC---CeEEEEeCC-CCeeEEE--eCC--CCCEEEEEECCC
Confidence 35667765544444432221 11223456789999988763 468888865 4332222 111 111124555678
Q ss_pred CcEEEEcCccCCeEEEEcCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEccc--eEEEeccCCeEE
Q 043369 166 GKIIVVGGRFQFTYEFIPRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDR--AILLDYVNNRVM 243 (526)
Q Consensus 166 G~v~viGG~~~~~~E~yP~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~~--~~~yDp~t~~w~ 243 (526)
|+.++.|+.++ .+.+|..+.. ....+.. .. .... .+...+||+.++.|+.+ ..+||..... .
T Consensus 356 g~~l~~~~~dg-~v~~~~~~~~----~~~~~~~--~~-------~~v~-~~~~s~dg~~l~~~~~d~~v~~~~~~~~~-~ 419 (577)
T 2ymu_A 356 GQTIASASDDK-TVKLWNRNGQ----LLQTLTG--HS-------SSVR-GVAFSPDGQTIASASDDKTVKLWNRNGQL-L 419 (577)
T ss_dssp SSEEEEEETTS-EEEEEETTCC----EEEEEEC--CS-------SCEE-EEEECTTSSCEEEEETTSEEEEECTTCCE-E
T ss_pred CCEEEEEeCCC-EEEEEcCCCC----EEEEecC--CC-------CCeE-EEEECCCCCEEEEEeCCCEEEEEeCCCCE-E
Confidence 99998887654 5666743320 1111110 00 0000 12345789988888754 5678854333 2
Q ss_pred EeccCCCCCCCCccCCCCceeecccccccccccccCCCCCccCcEEEEEcCCCCCCCchhhhhhcccccccceEEEEeec
Q 043369 244 KNYPVMPGGISRNYPSTGSSVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTITA 323 (526)
Q Consensus 244 ~~~p~~p~~~~r~y~~~g~~v~lp~~~~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~ 323 (526)
+.+. .. .+...-+.+. .+++.++.|+.+. ++..+|..
T Consensus 420 ~~~~---~~-------~~~v~~~~~s---------------~d~~~l~~~~~d~-----------------~v~~w~~~- 456 (577)
T 2ymu_A 420 QTLT---GH-------SSSVWGVAFS---------------PDDQTIASASDDK-----------------TVKLWNRN- 456 (577)
T ss_dssp EEEE---CC-------SSCEEEEEEC---------------TTSSEEEEEETTS-----------------EEEEEETT-
T ss_pred EEec---CC-------CCCeEEEEEC---------------CCCCEEEEEcCCC-----------------EEEEEECC-
Confidence 2221 11 0111111111 2567777776541 24456642
Q ss_pred CCCCceecccCccccccceEEeCCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCcEeecCCCCccccccccceecC
Q 043369 324 QNPKWEMEEMPLNRVMGDMILLPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINRFRILSPSLIPRLYHSTAHLLS 403 (526)
Q Consensus 324 ~~~~W~~~~M~~~R~~~~~vvLpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~Wt~~a~~~~~R~yhs~a~Llp 403 (526)
...-.... .+...-.+...-|||++++.++.+ + .+.+||.....-..+.... ... .....-|
T Consensus 457 -~~~~~~~~-~~~~~v~~~~~spd~~~las~~~d-~------------~i~iw~~~~~~~~~~~~h~-~~v--~~l~~s~ 518 (577)
T 2ymu_A 457 -GQLLQTLT-GHSSSVRGVAFSPDGQTIASASDD-K------------TVKLWNRNGQLLQTLTGHS-SSV--RGVAFSP 518 (577)
T ss_dssp -SCEEEEEE-CCSSCEEEEEECTTSCEEEEEETT-S------------EEEEEETTSCEEEEEECCS-SCE--EEEEECT
T ss_pred -CCEEEEEc-CCCCCEEEEEEcCCCCEEEEEeCC-C------------EEEEEcCCCCEEEEEeCCC-CCE--EEEEEcC
Confidence 11111111 111112233456899999998764 1 5688996543222221100 010 1223468
Q ss_pred CCEEEEecCCC
Q 043369 404 DGRVLVGGSNP 414 (526)
Q Consensus 404 dG~V~v~GG~~ 414 (526)
||+.+++|+..
T Consensus 519 dg~~l~s~~~d 529 (577)
T 2ymu_A 519 DGQTIASASDD 529 (577)
T ss_dssp TSSCEEEEETT
T ss_pred CCCEEEEEECc
Confidence 99999998853
No 77
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=96.56 E-value=0.54 Score=44.60 Aligned_cols=90 Identities=9% Similarity=0.034 Sum_probs=48.5
Q ss_pred eEEEEeCCCCcEEeCccCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEecC
Q 043369 86 HAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPN 165 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~d 165 (526)
...+||..+++....-..+..........++++.+++|+.. ..+.+||.......... ..+......-..... +
T Consensus 40 ~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~i~~~~~~~~~~~~~~--~~~~~~~~~i~~~~~-~ 113 (313)
T 3odt_A 40 TVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKD---TMINGVPLFATSGEDPL--YTLIGHQGNVCSLSF-Q 113 (313)
T ss_dssp EEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETT---SCEEEEETTCCTTSCC---CEECCCSSCEEEEEE-E
T ss_pred cEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCC---CeEEEEEeeecCCCCcc--cchhhcccCEEEEEe-c
Confidence 46788887766544333333333345567799999999873 35667765411112111 122222222233344 7
Q ss_pred CcEEEEcCccCCeEEEE
Q 043369 166 GKIIVVGGRFQFTYEFI 182 (526)
Q Consensus 166 G~v~viGG~~~~~~E~y 182 (526)
++.++.|+.++ .+.+|
T Consensus 114 ~~~l~~~~~d~-~i~~~ 129 (313)
T 3odt_A 114 DGVVISGSWDK-TAKVW 129 (313)
T ss_dssp TTEEEEEETTS-EEEEE
T ss_pred CCEEEEEeCCC-CEEEE
Confidence 78888887664 35555
No 78
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=96.56 E-value=0.21 Score=51.06 Aligned_cols=134 Identities=10% Similarity=0.014 Sum_probs=70.9
Q ss_pred eEEEEeCCCCcEEeCccCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEecC
Q 043369 86 HAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPN 165 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~d 165 (526)
...+||..+.+....-..+.... ..+..+++++++|+.+ ..+.+||.. +.+-... +......-..... +
T Consensus 154 ~i~iwd~~~~~~~~~~~~h~~~v--~~l~~~~~~l~sg~~d---g~i~vwd~~-~~~~~~~----~~~h~~~v~~l~~-~ 222 (435)
T 1p22_A 154 TIKIWDKNTLECKRILTGHTGSV--LCLQYDERVIITGSSD---STVRVWDVN-TGEMLNT----LIHHCEAVLHLRF-N 222 (435)
T ss_dssp CEEEEESSSCCEEEEECCCSSCE--EEEECCSSEEEEEETT---SCEEEEESS-SCCEEEE----ECCCCSCEEEEEC-C
T ss_pred eEEEEeCCCCeEEEEEcCCCCcE--EEEEECCCEEEEEcCC---CeEEEEECC-CCcEEEE----EcCCCCcEEEEEE-c
Confidence 36778988776543322222111 1222389999999863 468899987 5543221 2222222233344 5
Q ss_pred CcEEEEcCccCCeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEccc--eEEEeccCCeE
Q 043369 166 GKIIVVGGRFQFTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDR--AILLDYVNNRV 242 (526)
Q Consensus 166 G~v~viGG~~~~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~~--~~~yDp~t~~w 242 (526)
+..++.|+.++ .+.+| ..+.. .......+.. ...+...+..+|+.++.|+.+ ..+||..+++-
T Consensus 223 ~~~l~s~s~dg-~i~vwd~~~~~----~~~~~~~~~~---------~~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 288 (435)
T 1p22_A 223 NGMMVTCSKDR-SIAVWDMASPT----DITLRRVLVG---------HRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEF 288 (435)
T ss_dssp TTEEEEEETTS-CEEEEECSSSS----CCEEEEEECC---------CSSCEEEEEEETTEEEEEETTSEEEEEETTTCCE
T ss_pred CCEEEEeeCCC-cEEEEeCCCCC----CceeeeEecC---------CCCcEEEEEeCCCEEEEEeCCCeEEEEECCcCcE
Confidence 67777887664 46677 43331 1111011111 011233344488888888754 67899988765
Q ss_pred EE
Q 043369 243 MK 244 (526)
Q Consensus 243 ~~ 244 (526)
..
T Consensus 289 ~~ 290 (435)
T 1p22_A 289 VR 290 (435)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 79
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=96.55 E-value=0.13 Score=52.52 Aligned_cols=133 Identities=13% Similarity=0.061 Sum_probs=72.5
Q ss_pred eEEEEeCCCCcEEeCccC--CccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEe
Q 043369 86 HAVEFDPITRKVRPLTIQ--TDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQIL 163 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~--~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L 163 (526)
.+.+||..+++...+-.. +...-...+..+||+.+++|+.+ ..+++||.. +.+-... +...........
T Consensus 126 tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~D---g~v~iWd~~-~~~~~~~----~~~h~~~v~~~s- 196 (420)
T 4gga_A 126 SVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS---AEVQLWDVQ-QQKRLRN----MTSHSARVGSLS- 196 (420)
T ss_dssp EEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT---SCEEEEETT-TTEEEEE----ECCCSSCEEEEE-
T ss_pred EEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECC---CeEEEEEcC-CCcEEEE----EeCCCCceEEEe-
Confidence 578899999887664332 22222234566799999999873 478999987 5433221 221111122233
Q ss_pred cCCcEEEEcCccCCeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEccc--eEEEeccCC
Q 043369 164 PNGKIIVVGGRFQFTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDR--AILLDYVNN 240 (526)
Q Consensus 164 ~dG~v~viGG~~~~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~~--~~~yDp~t~ 240 (526)
.|+++++.|+.+. .+.++ ..... .....+. ... ..-......++|+.++.++.+ ..++|..++
T Consensus 197 ~~~~~l~sgs~d~-~i~~~d~~~~~---~~~~~~~---~h~-------~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~ 262 (420)
T 4gga_A 197 WNSYILSSGSRSG-HIHHHDVRVAE---HHVATLS---GHS-------QEVCGLRWAPDGRHLASGGNDNLVNVWPSAPG 262 (420)
T ss_dssp EETTEEEEEETTS-EEEEEETTSSS---CEEEEEE---CCS-------SCEEEEEECTTSSEEEEEETTSCEEEEESSCC
T ss_pred eCCCEEEEEeCCC-ceeEeeecccc---eeeEEec---ccc-------cceeeeeecCCCCeeeeeeccccceEEeeccc
Confidence 3789998888764 34444 32220 0111111 100 001123455688888888754 567777654
Q ss_pred e
Q 043369 241 R 241 (526)
Q Consensus 241 ~ 241 (526)
+
T Consensus 263 ~ 263 (420)
T 4gga_A 263 E 263 (420)
T ss_dssp S
T ss_pred c
Confidence 3
No 80
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.53 E-value=0.56 Score=44.35 Aligned_cols=131 Identities=8% Similarity=-0.016 Sum_probs=67.9
Q ss_pred EEEEeCCCCcEEeCccC-CccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCC-cccccceeEEec
Q 043369 87 AVEFDPITRKVRPLTIQ-TDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLI-SPRWYASNQILP 164 (526)
Q Consensus 87 ~~~yDp~t~~w~~~~~~-~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~-~~R~y~s~~~L~ 164 (526)
...||+. ++++..... ......+.+..++|++++.... ...+.+||+. .+.... .++ ....-.+.+.-+
T Consensus 80 i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~---~~~i~~~d~~--g~~~~~---~~~~~~~~~~~i~~~~ 150 (299)
T 2z2n_A 80 IGRITKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMN---GNRIGRITDD--GKIREY---ELPNKGSYPSFITLGS 150 (299)
T ss_dssp EEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETT---TTEEEEECTT--CCEEEE---ECSSTTCCEEEEEECT
T ss_pred EEEECCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEecC---CceEEEECCC--CCEEEe---cCCCCCCCCceEEEcC
Confidence 5567775 455444322 1122223344568999997643 2468889984 333332 111 112223445556
Q ss_pred CCcEEEEcCccCCeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceE-EEecCCcEEEEE--ccceEEEeccCC
Q 043369 165 NGKIIVVGGRFQFTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFL-HLSTDGNLFIFA--NDRAILLDYVNN 240 (526)
Q Consensus 165 dG~v~viGG~~~~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~-~~~~dG~Iy~~G--g~~~~~yDp~t~ 240 (526)
+|++|+..-. ...+.+| + ++ +....+.. . ....|.. ..-++|+||+.. +....+||+ ++
T Consensus 151 ~g~l~v~~~~-~~~i~~~~~-~g-----~~~~~~~~-~--------~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g 213 (299)
T 2z2n_A 151 DNALWFTENQ-NNAIGRITE-SG-----DITEFKIP-T--------PASGPVGITKGNDDALWFVEIIGNKIGRITT-SG 213 (299)
T ss_dssp TSCEEEEETT-TTEEEEECT-TC-----CEEEEECS-S--------TTCCEEEEEECTTSSEEEEETTTTEEEEECT-TC
T ss_pred CCCEEEEeCC-CCEEEEEcC-CC-----cEEEeeCC-C--------CCCcceeEEECCCCCEEEEccCCceEEEECC-CC
Confidence 8999986532 2345566 5 43 33222110 0 0112433 334589998876 345788999 66
Q ss_pred eEE
Q 043369 241 RVM 243 (526)
Q Consensus 241 ~w~ 243 (526)
+..
T Consensus 214 ~~~ 216 (299)
T 2z2n_A 214 EIT 216 (299)
T ss_dssp CEE
T ss_pred cEE
Confidence 654
No 81
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=96.51 E-value=0.65 Score=44.87 Aligned_cols=141 Identities=13% Similarity=0.087 Sum_probs=72.3
Q ss_pred eEEEEeCCCCcE-EeCccCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEec
Q 043369 86 HAVEFDPITRKV-RPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILP 164 (526)
Q Consensus 86 ~~~~yDp~t~~w-~~~~~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~ 164 (526)
...+||+.+++. .........-+.+.+..+||+.++++....+...+.+||.. +.+.... +.....-..++.-+
T Consensus 63 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~-~~~~~~~----~~~~~~~~~~~~sp 137 (331)
T 3u4y_A 63 TLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFL-KNKFIST----IPIPYDAVGIAISP 137 (331)
T ss_dssp EEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETT-TTEEEEE----EECCTTEEEEEECT
T ss_pred eEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECC-CCCeEEE----EECCCCccceEECC
Confidence 467899988875 22211222223324566889876655432122389999987 6554332 22222224566667
Q ss_pred CCc-EEEEcCccCCeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcce-EEEecCCc-EEEEEc--cceEEEecc
Q 043369 165 NGK-IIVVGGRFQFTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPF-LHLSTDGN-LFIFAN--DRAILLDYV 238 (526)
Q Consensus 165 dG~-v~viGG~~~~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~-~~~~~dG~-Iy~~Gg--~~~~~yDp~ 238 (526)
||+ +|+.+......+.+| -..+. ...... .... . ....|. ....+||+ +|+.+. ....+||..
T Consensus 138 dg~~l~~~~~~~~~~i~~~~~~~~g----~~~~~~-~~~~-~-----~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~ 206 (331)
T 3u4y_A 138 NGNGLILIDRSSANTVRRFKIDADG----VLFDTG-QEFI-S-----GGTRPFNITFTPDGNFAFVANLIGNSIGILETQ 206 (331)
T ss_dssp TSSCEEEEEETTTTEEEEEEECTTC----CEEEEE-EEEE-C-----SSSSEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred CCCEEEEEecCCCceEEEEEECCCC----cEeecC-Cccc-c-----CCCCccceEECCCCCEEEEEeCCCCeEEEEECC
Confidence 887 666654433326666 32220 111110 0000 0 011233 34457897 666653 347889998
Q ss_pred CCeE
Q 043369 239 NNRV 242 (526)
Q Consensus 239 t~~w 242 (526)
+++.
T Consensus 207 ~~~~ 210 (331)
T 3u4y_A 207 NPEN 210 (331)
T ss_dssp STTS
T ss_pred CCcc
Confidence 7765
No 82
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=96.47 E-value=0.14 Score=49.92 Aligned_cols=145 Identities=13% Similarity=0.079 Sum_probs=71.6
Q ss_pred eEEEEeCCCCcEEeCcc-CCccccccceEcCC---CcEEEEcCCCCCccEEEEEcCCCCCC--cccc--cCCCCCccccc
Q 043369 86 HAVEFDPITRKVRPLTI-QTDTWCSSGALLAN---GVLVQTGGYRLGERVVRYLKPCSDCD--WEED--HQNGLISPRWY 157 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~-~~~~fc~~~~~l~~---G~l~v~GG~~~g~~~v~~ydp~~t~~--W~~~--~~~~m~~~R~y 157 (526)
...+||..+++...... .+..........++ |.++++|+.. ..+.+||.. +.+ -... +......-.|.
T Consensus 45 ~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d---g~i~iwd~~-~~~~~~~~~~~~~~~v~~~~~~ 120 (357)
T 3i2n_A 45 VIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFG---GNLHIWNLE-APEMPVYSVKGHKEIINAIDGI 120 (357)
T ss_dssp EEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETT---SCEEEECTT-SCSSCSEEECCCSSCEEEEEEE
T ss_pred EEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCC---CeEEEEeCC-CCCccEEEEEecccceEEEeec
Confidence 47789998887765432 12222222334455 6888888763 468899987 443 1111 00000000111
Q ss_pred ceeEEecCCcEEEEcCccCCeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEE---EecCCcEEEEEcc--c
Q 043369 158 ASNQILPNGKIIVVGGRFQFTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLH---LSTDGNLFIFAND--R 231 (526)
Q Consensus 158 ~s~~~L~dG~v~viGG~~~~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~---~~~dG~Iy~~Gg~--~ 231 (526)
+..+.-++++.++.|+.++ .+.+| ..+... ....+....... ....+...+ ..+++++++.|+. .
T Consensus 121 ~~~~~s~~~~~l~~~~~d~-~i~vwd~~~~~~---~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~~~l~~~~~d~~ 191 (357)
T 3i2n_A 121 GGLGIGEGAPEIVTGSRDG-TVKVWDPRQKDD---PVANMEPVQGEN-----KRDCWTVAFGNAYNQEERVVCAGYDNGD 191 (357)
T ss_dssp SGGGCC-CCCEEEEEETTS-CEEEECTTSCSS---CSEEECCCTTSC-----CCCEEEEEEECCCC-CCCEEEEEETTSE
T ss_pred cccccCCCccEEEEEeCCC-eEEEEeCCCCCC---cceeccccCCCC-----CCceEEEEEEeccCCCCCEEEEEccCCe
Confidence 1112235788888888764 46677 443310 111221111100 001111111 2268999998875 4
Q ss_pred eEEEeccCCeEE
Q 043369 232 AILLDYVNNRVM 243 (526)
Q Consensus 232 ~~~yDp~t~~w~ 243 (526)
..+||..+.+-.
T Consensus 192 i~i~d~~~~~~~ 203 (357)
T 3i2n_A 192 IKLFDLRNMALR 203 (357)
T ss_dssp EEEEETTTTEEE
T ss_pred EEEEECccCcee
Confidence 678999887743
No 83
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=96.46 E-value=0.63 Score=44.17 Aligned_cols=156 Identities=14% Similarity=0.130 Sum_probs=82.0
Q ss_pred ceeEEEEecCCeEEEEecccCCCCCccCCCCccccCccccCCCCcceEEEEeCCCCcEEeCccC----CccccccceEc-
Q 043369 40 SAMHMALLPNDRIIAFDRSHFGPSNITLPQGKCIKGVELETSDCYAHAVEFDPITRKVRPLTIQ----TDTWCSSGALL- 114 (526)
Q Consensus 40 ~~~~~a~l~~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~yDp~t~~w~~~~~~----~~~fc~~~~~l- 114 (526)
.+..+++-++|++|+.+..+ + ...+||+..+..+.+... .......+.++
T Consensus 31 ~p~~v~~~~~g~l~v~~~~~----------~---------------~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~ 85 (286)
T 1q7f_A 31 EPSGVAVNAQNDIIVADTNN----------H---------------RIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVV 85 (286)
T ss_dssp CEEEEEECTTCCEEEEEGGG----------T---------------EEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEE
T ss_pred CCceEEECCCCCEEEEECCC----------C---------------EEEEECCCCcEEEEecccCCCcccccCceEEEEE
Confidence 35566666789988876542 1 356788775444443321 11112223333
Q ss_pred -CCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEecCCcEEEEcCccCCeEEEE-cCCCCCCCcc
Q 043369 115 -ANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPNGKIIVVGGRFQFTYEFI-PRTSDSDRKI 192 (526)
Q Consensus 115 -~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~dG~v~viGG~~~~~~E~y-P~~~~~~~~~ 192 (526)
.+|++|+.+.. +...+.+||+. ...-.......+..+ .+++.-++|++|+....+ ..+.+| +... .
T Consensus 86 ~~~g~l~v~~~~--~~~~i~~~d~~-g~~~~~~~~~~~~~~---~~i~~~~~g~l~v~~~~~-~~i~~~~~~g~-----~ 153 (286)
T 1q7f_A 86 RNSGDIIVTERS--PTHQIQIYNQY-GQFVRKFGATILQHP---RGVTVDNKGRIIVVECKV-MRVIIFDQNGN-----V 153 (286)
T ss_dssp TTTTEEEEEECG--GGCEEEEECTT-SCEEEEECTTTCSCE---EEEEECTTSCEEEEETTT-TEEEEECTTSC-----E
T ss_pred cCCCeEEEEcCC--CCCEEEEECCC-CcEEEEecCccCCCc---eEEEEeCCCCEEEEECCC-CEEEEEcCCCC-----E
Confidence 58999998742 12578999975 332222200112222 245556789999876433 345666 4322 1
Q ss_pred eeecCCccccCCCCCCCCCCcceE-EEecCCcEEEEEc--cceEEEeccCCe
Q 043369 193 LYQLPFLKETMHSPKIPNNLYPFL-HLSTDGNLFIFAN--DRAILLDYVNNR 241 (526)
Q Consensus 193 w~~~p~l~~~~~~~~~~~~~yp~~-~~~~dG~Iy~~Gg--~~~~~yDp~t~~ 241 (526)
....... . ....|.. ..-++|+||+... ....+||+....
T Consensus 154 ~~~~~~~-~--------~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~ 196 (286)
T 1q7f_A 154 LHKFGCS-K--------HLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQY 196 (286)
T ss_dssp EEEEECT-T--------TCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCCE
T ss_pred EEEeCCC-C--------ccCCcEEEEECCCCCEEEEECCCCEEEEEcCCCCE
Confidence 1111100 0 0113443 3445899998763 457889986554
No 84
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=96.43 E-value=0.13 Score=54.64 Aligned_cols=269 Identities=9% Similarity=-0.040 Sum_probs=133.3
Q ss_pred EEEEecCCeEEEEecccCCCCCccCCCCccccCccccCCCCcceEEEEeCCCC----c-EEeCccCCccc-cccceEcC-
Q 043369 43 HMALLPNDRIIAFDRSHFGPSNITLPQGKCIKGVELETSDCYAHAVEFDPITR----K-VRPLTIQTDTW-CSSGALLA- 115 (526)
Q Consensus 43 ~~a~l~~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~yDp~t~----~-w~~~~~~~~~f-c~~~~~l~- 115 (526)
.++.-++|+.++++.. + ...+||..+. + ...+.. +... -......+
T Consensus 23 ~~~~spdg~~l~~~~~-----------~---------------~v~v~~~~~~~~~~~~~~~~~~-h~~~~v~~~~~sp~ 75 (615)
T 1pgu_A 23 HLSYDPTTNAIAYPCG-----------K---------------SAFVRCLDDGDSKVPPVVQFTG-HGSSVVTTVKFSPI 75 (615)
T ss_dssp CCEEETTTTEEEEEET-----------T---------------EEEEEECCSSCCSSCSEEEECT-TTTSCEEEEEECSS
T ss_pred EEEECCCCCEEEEecC-----------C---------------eEEEEECCCCCCccccceEEec-CCCceEEEEEECcC
Confidence 4445688988888752 1 3667888766 3 233322 2221 22345667
Q ss_pred -CCcEEEEcCCCCCccEEEEEcCCCCC------CcccccCCCCC-cccccceeEEecCCcEEEEcCccCC---eEEEEcC
Q 043369 116 -NGVLVQTGGYRLGERVVRYLKPCSDC------DWEEDHQNGLI-SPRWYASNQILPNGKIIVVGGRFQF---TYEFIPR 184 (526)
Q Consensus 116 -~G~l~v~GG~~~g~~~v~~ydp~~t~------~W~~~~~~~m~-~~R~y~s~~~L~dG~v~viGG~~~~---~~E~yP~ 184 (526)
||+++++|+.. ..+++||.. +. ..... ..+. ....-.+++.-+||+.++++|.+.. .+.+|.
T Consensus 76 ~~~~~l~s~~~d---g~v~vw~~~-~~~~~~~~~~~~~--~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d- 148 (615)
T 1pgu_A 76 KGSQYLCSGDES---GKVIVWGWT-FDKESNSVEVNVK--SEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD- 148 (615)
T ss_dssp TTCCEEEEEETT---SEEEEEEEE-EEGGGTEEEEEEE--EEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT-
T ss_pred CCCCEEEEecCC---CEEEEEeCC-CCccccccccccc--chhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE-
Confidence 99999999863 468888874 33 22221 1111 1222334555678999998886531 233332
Q ss_pred CCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCc-EEEEEcc--ceEEEeccCCeEEEeccCCCCCCCCccCCCC
Q 043369 185 TSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGN-LFIFAND--RAILLDYVNNRVMKNYPVMPGGISRNYPSTG 261 (526)
Q Consensus 185 ~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~-Iy~~Gg~--~~~~yDp~t~~w~~~~p~~p~~~~r~y~~~g 261 (526)
... .-..+.. .. .... .+...++|+ +++.|+. ...+||..+.+....+ ....... .
T Consensus 149 ~~~----~~~~~~~--~~-------~~v~-~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~---~~~~~~~----~ 207 (615)
T 1pgu_A 149 SGN----SLGEVSG--HS-------QRIN-ACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASD---RTHHKQG----S 207 (615)
T ss_dssp TCC----EEEECCS--CS-------SCEE-EEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEE---CSSSCTT----C
T ss_pred CCC----cceeeec--CC-------ccEE-EEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeee---cccCCCC----c
Confidence 210 1111110 00 0111 233456776 7777764 4678898877654333 2110000 0
Q ss_pred ceeecccccccccccccCCCCCccC-cEEEEEcCCCCCCCchhhhhhcccccccceEEEEeecCCCCceeccc-----Cc
Q 043369 262 SSVLLPVNLSSINVHINNNNKPVVH-SQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTITAQNPKWEMEEM-----PL 335 (526)
Q Consensus 262 ~~v~lp~~~~~~~~~~~~~~~~~~~-gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M-----~~ 335 (526)
...-+... .+ ++.+++|+.+. .+..+|+.. .+... .+ ..
T Consensus 208 ~v~~~~~~---------------~~~~~~l~~~~~dg-----------------~i~vwd~~~--~~~~~-~~~~~~~~~ 252 (615)
T 1pgu_A 208 FVRDVEFS---------------PDSGEFVITVGSDR-----------------KISCFDGKS--GEFLK-YIEDDQEPV 252 (615)
T ss_dssp CEEEEEEC---------------STTCCEEEEEETTC-----------------CEEEEETTT--CCEEE-ECCBTTBCC
T ss_pred eEEEEEEC---------------CCCCCEEEEEeCCC-----------------eEEEEECCC--CCEeE-Eeccccccc
Confidence 11111111 15 77888887641 345677642 22111 12 22
Q ss_pred cccccceEEeCCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCcEeecCCCC-ccccccccceecCCCEEEEecCCC
Q 043369 336 NRVMGDMILLPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINRFRILSPSL-IPRLYHSTAHLLSDGRVLVGGSNP 414 (526)
Q Consensus 336 ~R~~~~~vvLpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~Wt~~a~~~-~~R~yhs~a~LlpdG~V~v~GG~~ 414 (526)
...-.+.... +++.+++++.+ + .+.+||..+.+-...-... .+......++..++++.+++|+..
T Consensus 253 ~~~v~~~~~~-~~~~l~~~~~d-~------------~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 318 (615)
T 1pgu_A 253 QGGIFALSWL-DSQKFATVGAD-A------------TIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLD 318 (615)
T ss_dssp CSCEEEEEES-SSSEEEEEETT-S------------EEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETT
T ss_pred CCceEEEEEc-CCCEEEEEcCC-C------------cEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECC
Confidence 2111222333 89999988865 2 5689999877432211111 111112233444578888887754
Q ss_pred C
Q 043369 415 N 415 (526)
Q Consensus 415 ~ 415 (526)
.
T Consensus 319 g 319 (615)
T 1pgu_A 319 G 319 (615)
T ss_dssp S
T ss_pred C
Confidence 3
No 85
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=96.37 E-value=0.64 Score=47.52 Aligned_cols=246 Identities=14% Similarity=0.110 Sum_probs=119.3
Q ss_pred eEEEEeCCCCcEEeCccCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcc-cccceeEEe-
Q 043369 86 HAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISP-RWYASNQIL- 163 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~-R~y~s~~~L- 163 (526)
...+||..+++-...-..+..........+++ ++++|+.+ ..+.+||.. +.+-... +... ..-.++...
T Consensus 143 ~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~d---g~i~vwd~~-~~~~~~~----~~~h~~~v~~l~~~~ 213 (464)
T 3v7d_B 143 MIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTD---RTVRVWDIK-KGCCTHV----FEGHNSTVRCLDIVE 213 (464)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETT---SCEEEEETT-TTEEEEE----ECCCSSCEEEEEEEE
T ss_pred cEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCC---CCEEEEECC-CCcEEEE----ECCCCCccEEEEEec
Confidence 36778887776432212222211112334455 77777763 468899987 5432211 1111 111122222
Q ss_pred -cCCcEEEEcCccCCeEEEE-cCCCCCCCcceee---------------cCCccccCCCCCCCCCCcceEEEecCCcEEE
Q 043369 164 -PNGKIIVVGGRFQFTYEFI-PRTSDSDRKILYQ---------------LPFLKETMHSPKIPNNLYPFLHLSTDGNLFI 226 (526)
Q Consensus 164 -~dG~v~viGG~~~~~~E~y-P~~~~~~~~~w~~---------------~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~ 226 (526)
++++.++.|+.++ .+.+| ..+... .... .+.+..... ....+...+.+++++++
T Consensus 214 ~~~~~~l~s~s~d~-~i~vwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~l~ 284 (464)
T 3v7d_B 214 YKNIKYIVTGSRDN-TLHVWKLPKESS---VPDHGEEHDYPLVFHTPEENPYFVGVLR-----GHMASVRTVSGHGNIVV 284 (464)
T ss_dssp SSSCEEEEEEETTS-CEEEEECCCCCC---C------CCSSEEESCGGGCTTEEEEEC-----CCSSCEEEEEEETTEEE
T ss_pred CCCCCEEEEEcCCC-cEEEeeCCCCcc---cccccccCCcceEeeccCCCeEEEEEcc-----CccceEEEEcCCCCEEE
Confidence 4778888888764 35555 322210 0000 000000000 01122334566888888
Q ss_pred EEccc--eEEEeccCCeEEEeccCCCCCCCCccCCCCceeecccccccccccccCCCCCccCcEEEEEcCCCCCCCchhh
Q 043369 227 FANDR--AILLDYVNNRVMKNYPVMPGGISRNYPSTGSSVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAA 304 (526)
Q Consensus 227 ~Gg~~--~~~yDp~t~~w~~~~p~~p~~~~r~y~~~g~~v~lp~~~~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~ 304 (526)
.|+.+ ..+||..+.+-...+ ... . +...-+... .+++.+++|+.+.
T Consensus 285 ~~~~d~~i~vwd~~~~~~~~~~---~~~--~-----~~v~~~~~~---------------~~~~~l~sg~~dg------- 332 (464)
T 3v7d_B 285 SGSYDNTLIVWDVAQMKCLYIL---SGH--T-----DRIYSTIYD---------------HERKRCISASMDT------- 332 (464)
T ss_dssp EEETTSCEEEEETTTTEEEEEE---CCC--S-----SCEEEEEEE---------------TTTTEEEEEETTS-------
T ss_pred EEeCCCeEEEEECCCCcEEEEe---cCC--C-----CCEEEEEEc---------------CCCCEEEEEeCCC-------
Confidence 88754 678999887754333 211 0 111111111 2566777777641
Q ss_pred hhhcccccccceEEEEeecCCCCceec-ccCccccccceEEeCCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCcE
Q 043369 305 EAQIFLPAAKSCGRLTITAQNPKWEME-EMPLNRVMGDMILLPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINRF 383 (526)
Q Consensus 305 ~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvLpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~W 383 (526)
.+..+|+.. . +.. .+.........+.+ +++.++.|+.+ | .+.+||..+.+-
T Consensus 333 ----------~i~vwd~~~--~--~~~~~~~~h~~~v~~~~~-~~~~l~s~s~d-g------------~v~vwd~~~~~~ 384 (464)
T 3v7d_B 333 ----------TIRIWDLEN--G--ELMYTLQGHTALVGLLRL-SDKFLVSAAAD-G------------SIRGWDANDYSR 384 (464)
T ss_dssp ----------CEEEEETTT--T--EEEEEECCCSSCEEEEEE-CSSEEEEEETT-S------------EEEEEETTTCCE
T ss_pred ----------cEEEEECCC--C--cEEEEEeCCCCcEEEEEE-cCCEEEEEeCC-C------------cEEEEECCCCce
Confidence 355677642 1 211 22222222233444 78888888765 2 578999987642
Q ss_pred eecCCCCccccccccceecCCCEEEEecC
Q 043369 384 RILSPSLIPRLYHSTAHLLSDGRVLVGGS 412 (526)
Q Consensus 384 t~~a~~~~~R~yhs~a~LlpdG~V~v~GG 412 (526)
..... ... ......+-+||+++++|+
T Consensus 385 ~~~~~--~~~-~~~~~~~~~~~~~l~~~~ 410 (464)
T 3v7d_B 385 KFSYH--HTN-LSAITTFYVSDNILVSGS 410 (464)
T ss_dssp EEEEE--CTT-CCCEEEEEECSSEEEEEE
T ss_pred eeeec--CCC-CccEEEEEeCCCEEEEec
Confidence 21111 111 112345568999999987
No 86
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.35 E-value=0.023 Score=56.57 Aligned_cols=112 Identities=12% Similarity=0.086 Sum_probs=58.9
Q ss_pred eEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCccc-ccceeEEecCCcEEEEcCccCCeEEEE-cCCCCCC
Q 043369 112 ALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPR-WYASNQILPNGKIIVVGGRFQFTYEFI-PRTSDSD 189 (526)
Q Consensus 112 ~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R-~y~s~~~L~dG~v~viGG~~~~~~E~y-P~~~~~~ 189 (526)
..-+||+++++|+.. ..+.+||.. +..|... ..+.... .-.+++..+||+.++.|+.++ .+.+| ..+..
T Consensus 18 ~~s~~g~~l~~~~~d---~~i~iw~~~-~~~~~~~--~~~~~h~~~v~~~~~s~~~~~l~s~s~d~-~v~vwd~~~~~-- 88 (377)
T 3dwl_C 18 AFNSQRTEFVTTTAT---NQVELYEQD-GNGWKHA--RTFSDHDKIVTCVDWAPKSNRIVTCSQDR-NAYVYEKRPDG-- 88 (377)
T ss_dssp EECSSSSEEECCCSS---SCBCEEEEE-TTEEEEC--CCBCCCSSCEEEEEECTTTCCEEEEETTS-SEEEC--------
T ss_pred EECCCCCEEEEecCC---CEEEEEEcc-CCceEEE--EEEecCCceEEEEEEeCCCCEEEEEeCCC-eEEEEEcCCCC--
Confidence 455689999998763 467888887 6666554 3343222 223445556889888888764 46666 44331
Q ss_pred CcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEccc--eEEEeccCCe
Q 043369 190 RKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDR--AILLDYVNNR 241 (526)
Q Consensus 190 ~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~~--~~~yDp~t~~ 241 (526)
.+.....+... . .... .+...++|++++.|+.+ ..+||..+++
T Consensus 89 --~~~~~~~~~~~-~-----~~v~-~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 133 (377)
T 3dwl_C 89 --TWKQTLVLLRL-N-----RAAT-FVRWSPNEDKFAVGSGARVISVCYFEQEN 133 (377)
T ss_dssp --CCCCEEECCCC-S-----SCEE-EEECCTTSSCCEEEESSSCEEECCC----
T ss_pred --ceeeeeEeccc-C-----CceE-EEEECCCCCEEEEEecCCeEEEEEECCcc
Confidence 12111101110 0 0111 12334688888888754 5778887654
No 87
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=96.35 E-value=0.42 Score=48.24 Aligned_cols=137 Identities=10% Similarity=-0.034 Sum_probs=72.2
Q ss_pred eEEEEeCCCCcEEeCccCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEecC
Q 043369 86 HAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPN 165 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~d 165 (526)
...+||+.+++....-..+.......+..++|+.+++.+..+ ..+.+||+. +.+.... +.....-.+++.-+|
T Consensus 192 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~i~~~d~~-~~~~~~~----~~~~~~~~~~~~~~~ 264 (433)
T 3bws_A 192 AVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWIS--EDISVIDRK-TKLEIRK----TDKIGLPRGLLLSKD 264 (433)
T ss_dssp EEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTT--TEEEEEETT-TTEEEEE----CCCCSEEEEEEECTT
T ss_pred EEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCC--CcEEEEECC-CCcEEEE----ecCCCCceEEEEcCC
Confidence 567899988765432222222223345567777664444322 479999987 6554332 222222234445568
Q ss_pred CcEEEEcCccC-------CeEEEE-cCCCCCCCccee-ecCCccccCCCCCCCCCCcc-eEEEecCCc-EEEEEcc--ce
Q 043369 166 GKIIVVGGRFQ-------FTYEFI-PRTSDSDRKILY-QLPFLKETMHSPKIPNNLYP-FLHLSTDGN-LFIFAND--RA 232 (526)
Q Consensus 166 G~v~viGG~~~-------~~~E~y-P~~~~~~~~~w~-~~p~l~~~~~~~~~~~~~yp-~~~~~~dG~-Iy~~Gg~--~~ 232 (526)
|+.+++++... ..+.+| +.+. +.. .... .. .+ .....++|+ +|+.+.. ..
T Consensus 265 g~~l~~~~~~~~~~~~~dg~i~~~d~~~~-----~~~~~~~~-~~-----------~~~~~~~~~~g~~l~~~~~~~~~v 327 (433)
T 3bws_A 265 GKELYIAQFSASNQESGGGRLGIYSMDKE-----KLIDTIGP-PG-----------NKRHIVSGNTENKIYVSDMCCSKI 327 (433)
T ss_dssp SSEEEEEEEESCTTCSCCEEEEEEETTTT-----EEEEEEEE-EE-----------CEEEEEECSSTTEEEEEETTTTEE
T ss_pred CCEEEEEECCCCccccCCCeEEEEECCCC-----cEEeeccC-CC-----------CcceEEECCCCCEEEEEecCCCEE
Confidence 87777776532 245566 4443 211 1110 00 11 123456774 7776553 46
Q ss_pred EEEeccCCeEEEec
Q 043369 233 ILLDYVNNRVMKNY 246 (526)
Q Consensus 233 ~~yDp~t~~w~~~~ 246 (526)
.+||..+++....+
T Consensus 328 ~v~d~~~~~~~~~~ 341 (433)
T 3bws_A 328 EVYDLKEKKVQKSI 341 (433)
T ss_dssp EEEETTTTEEEEEE
T ss_pred EEEECCCCcEEEEe
Confidence 78999987755433
No 88
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=96.34 E-value=0.28 Score=48.85 Aligned_cols=63 Identities=14% Similarity=-0.046 Sum_probs=37.4
Q ss_pred ceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEecCCcEEEEcCccCCeEEEE
Q 043369 111 GALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPNGKIIVVGGRFQFTYEFI 182 (526)
Q Consensus 111 ~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~dG~v~viGG~~~~~~E~y 182 (526)
....++|+++++|+.. ..+.+||.. ...-... . .....-.+++..++|+.++.|+.++ .+.+|
T Consensus 114 ~~~s~~~~~l~~~~~d---g~i~i~~~~-~~~~~~~--~--~~~~~v~~~~~~~~~~~l~~~~~d~-~i~iw 176 (425)
T 1r5m_A 114 LAWSHDGNSIVTGVEN---GELRLWNKT-GALLNVL--N--FHRAPIVSVKWNKDGTHIISMDVEN-VTILW 176 (425)
T ss_dssp EEECTTSSEEEEEETT---SCEEEEETT-SCEEEEE--C--CCCSCEEEEEECTTSSEEEEEETTC-CEEEE
T ss_pred EEEcCCCCEEEEEeCC---CeEEEEeCC-CCeeeec--c--CCCccEEEEEECCCCCEEEEEecCC-eEEEE
Confidence 4556799999999863 468888854 3222222 1 1112223455556898888887654 35556
No 89
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=96.34 E-value=0.65 Score=44.71 Aligned_cols=95 Identities=12% Similarity=-0.019 Sum_probs=44.7
Q ss_pred eEEEEeCC--CCcEEeCccCC-ccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCC-CcccccCCCCCcccccceeE
Q 043369 86 HAVEFDPI--TRKVRPLTIQT-DTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDC-DWEEDHQNGLISPRWYASNQ 161 (526)
Q Consensus 86 ~~~~yDp~--t~~w~~~~~~~-~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~-~W~~~~~~~m~~~R~y~s~~ 161 (526)
...+||.. +++++.+.... .......+.-++|+.+++++..+ ..+.+||.. .. ..... ..+.....-..++
T Consensus 61 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~--~~i~~~d~~-~~~~~~~~--~~~~~~~~~~~~~ 135 (343)
T 1ri6_A 61 RVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNA--GNVSVTRLE-DGLPVGVV--DVVEGLDGCHSAN 135 (343)
T ss_dssp EEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTT--TEEEEEEEE-TTEEEEEE--EEECCCTTBCCCE
T ss_pred eEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecCC--CeEEEEECC-CCcccccc--ccccCCCCceEEE
Confidence 35566665 77776554221 11222234567888665554422 467888872 11 11111 1111111122344
Q ss_pred EecCCcEEEEcCccCCeEEEE-cCC
Q 043369 162 ILPNGKIIVVGGRFQFTYEFI-PRT 185 (526)
Q Consensus 162 ~L~dG~v~viGG~~~~~~E~y-P~~ 185 (526)
.-+||+.+++++.....+.+| ..+
T Consensus 136 ~s~dg~~l~~~~~~~~~v~~~d~~~ 160 (343)
T 1ri6_A 136 ISPDNRTLWVPALKQDRICLFTVSD 160 (343)
T ss_dssp ECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred ECCCCCEEEEecCCCCEEEEEEecC
Confidence 556786444444233456677 444
No 90
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=96.33 E-value=0.92 Score=44.66 Aligned_cols=28 Identities=18% Similarity=0.456 Sum_probs=18.3
Q ss_pred EEEecCCc-EEEEE--ccceEEEeccCCeEE
Q 043369 216 LHLSTDGN-LFIFA--NDRAILLDYVNNRVM 243 (526)
Q Consensus 216 ~~~~~dG~-Iy~~G--g~~~~~yDp~t~~w~ 243 (526)
+...+||+ +|+.. +....+||..+++..
T Consensus 216 ~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~ 246 (361)
T 3scy_A 216 LIFNSDGKFAYLINEIGGTVIAFRYADGMLD 246 (361)
T ss_dssp EEECTTSSEEEEEETTTCEEEEEEEETTEEE
T ss_pred EEEcCCCCEEEEEcCCCCeEEEEEecCCceE
Confidence 34567997 55554 245778998877653
No 91
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=96.30 E-value=0.81 Score=44.41 Aligned_cols=106 Identities=13% Similarity=0.029 Sum_probs=51.6
Q ss_pred ccEEEEEcCCCCCCcccccCCCCCcccccceeEEecCCc-EEEEcCccCCeEEEE-cCCCCCCCcceeecCCccccCCCC
Q 043369 129 ERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPNGK-IIVVGGRFQFTYEFI-PRTSDSDRKILYQLPFLKETMHSP 206 (526)
Q Consensus 129 ~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~dG~-v~viGG~~~~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~ 206 (526)
...+.++|+. +.+.... ......-.+.+.-+||+ +|+.+..+ ..+.+| +.+.. ....++.-......
T Consensus 68 ~~~v~~~d~~-~~~~~~~----~~~~~~~~~~~~s~dg~~l~v~~~~~-~~v~~~d~~~~~----~~~~~~~~~~~~~~- 136 (353)
T 3vgz_A 68 GGVVYRLDPV-TLEVTQA----IHNDLKPFGATINNTTQTLWFGNTVN-SAVTAIDAKTGE----VKGRLVLDDRKRTE- 136 (353)
T ss_dssp SEEEEEECTT-TCCEEEE----EEESSCCCSEEEETTTTEEEEEETTT-TEEEEEETTTCC----EEEEEESCCCCCCS-
T ss_pred CccEEEEcCC-CCeEEEE----EecCCCcceEEECCCCCEEEEEecCC-CEEEEEeCCCCe----eEEEEecCCCcccc-
Confidence 3578999987 6543322 11122223455566887 66665533 467777 65541 11122210000000
Q ss_pred CCCCCCcceE-EEecCCc-EEEEE-c--cceEEEeccCCeEEEec
Q 043369 207 KIPNNLYPFL-HLSTDGN-LFIFA-N--DRAILLDYVNNRVMKNY 246 (526)
Q Consensus 207 ~~~~~~yp~~-~~~~dG~-Iy~~G-g--~~~~~yDp~t~~w~~~~ 246 (526)
......|.. ...+||+ +|+.+ + ....+||+.+.+..+.+
T Consensus 137 -~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~ 180 (353)
T 3vgz_A 137 -EVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAI 180 (353)
T ss_dssp -SCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEE
T ss_pred -ccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEe
Confidence 001112332 3456776 55554 2 24788999988765434
No 92
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.24 E-value=0.052 Score=60.56 Aligned_cols=243 Identities=11% Similarity=0.054 Sum_probs=117.3
Q ss_pred cCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccc-eeEEecC--CcEEEEcCccCCeEEEE-cCCCCCC
Q 043369 114 LANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYA-SNQILPN--GKIIVVGGRFQFTYEFI-PRTSDSD 189 (526)
Q Consensus 114 l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~-s~~~L~d--G~v~viGG~~~~~~E~y-P~~~~~~ 189 (526)
-++|+.+++||.+ ..+.+||.. +.++... ..+...+..- +++..++ |+.++.|+.++ .+.+| ..++
T Consensus 18 s~dg~~latg~~d---g~I~vwd~~-~~~~~~~--~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg-~I~vwd~~~~--- 87 (753)
T 3jro_A 18 DYYGKRLATCSSD---KTIKIFEVE-GETHKLI--DTLTGHEGPVWRVDWAHPKFGTILASCSYDG-KVLIWKEENG--- 87 (753)
T ss_dssp CSSSCCEEEEETT---TEEEEEEEE-TTEEEEE--EEECCCSSCEEEEEECCTTSCSEEEEEETTS-CEEEEEEETT---
T ss_pred CCCCCeEEEEECC---CcEEEEecC-CCCCccc--eeccCCcCceEEEEecCCCCCCEEEEEeCCC-eEEEEECCCC---
Confidence 3578888888763 478888876 5555544 2232222222 2233345 88999988765 45666 4443
Q ss_pred CcceeecCCccccCCCCCCCCCCcceEEEecC--CcEEEEEccc--eEEEeccCCeEEEeccCCCCCCCCccCCCCceee
Q 043369 190 RKILYQLPFLKETMHSPKIPNNLYPFLHLSTD--GNLFIFANDR--AILLDYVNNRVMKNYPVMPGGISRNYPSTGSSVL 265 (526)
Q Consensus 190 ~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~d--G~Iy~~Gg~~--~~~yDp~t~~w~~~~p~~p~~~~r~y~~~g~~v~ 265 (526)
.+.....+.... .... .+...++ |+++++|+.+ ..+||..++.-.... .+... .+...-
T Consensus 88 --~~~~~~~~~~h~------~~V~-~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~-~~~~~-------~~~v~~ 150 (753)
T 3jro_A 88 --RWSQIAVHAVHS------ASVN-SVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPI-IIDAH-------AIGVNS 150 (753)
T ss_dssp --EEEEEEEECCCS------SCEE-EEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCE-EEECC-------SSCEEE
T ss_pred --cccccccccCCC------CCeE-EEEECCCCCCCEEEEEeCCCcEEEEEeecCCCccee-EeecC-------CCceEE
Confidence 332221111100 0111 1233456 8899988864 567888765211000 00000 011111
Q ss_pred cccccccccccccCCCCCccCcEEEEEcCCCCCCCchhhhhhcccccccceEEEEeecCCCCceec-ccCc-cccccceE
Q 043369 266 LPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTITAQNPKWEME-EMPL-NRVMGDMI 343 (526)
Q Consensus 266 lp~~~~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~-~R~~~~~v 343 (526)
+...|..+.. ........+++++++|+.+. .+..+|+......+... .+.. ...-.+..
T Consensus 151 l~~~p~~~~~--~~~~~~~~d~~~l~sgs~dg-----------------~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~ 211 (753)
T 3jro_A 151 ASWAPATIEE--DGEHNGTKESRKFVTGGADN-----------------LVKIWKYNSDAQTYVLESTLEGHSDWVRDVA 211 (753)
T ss_dssp EEECCCC-----------CGGGCCEEEEETTS-----------------CEEEEEEETTTTEEEEEEEECCCSSCEEEEE
T ss_pred EEecCccccc--ccccccCCCCCEEEEEECCC-----------------eEEEEeccCCcccceeeeeecCCCCcEEEEE
Confidence 1111000000 00000001467788877641 35678876544444443 2221 11122334
Q ss_pred EeCC---CcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCc--Ee-ecCCCCccccccccceecCCCEEEEecCCCC
Q 043369 344 LLPT---GDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINR--FR-ILSPSLIPRLYHSTAHLLSDGRVLVGGSNPN 415 (526)
Q Consensus 344 vLpd---G~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~--Wt-~~a~~~~~R~yhs~a~LlpdG~V~v~GG~~~ 415 (526)
.-|+ |++++.||.+ | .+.+||..+.+ +. .+.........-.....-|||+.+++||...
T Consensus 212 ~sp~~~~~~~l~s~s~D-g------------~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg 276 (753)
T 3jro_A 212 WSPTVLLRSYLASVSQD-R------------TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDN 276 (753)
T ss_dssp ECCCCSSSEEEEEEESS-S------------CEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSS
T ss_pred eccCCCCCCEEEEEecC-C------------EEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCC
Confidence 5688 8999999865 2 57899988763 11 1111111111112234568999999988644
No 93
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=96.20 E-value=0.96 Score=46.05 Aligned_cols=238 Identities=13% Similarity=0.069 Sum_probs=117.5
Q ss_pred eEEEEeCCCCcEEeCccCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEecC
Q 043369 86 HAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPN 165 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~d 165 (526)
...+||..+++....-..+.... .....++.++++|+.+ ..+.+||.. +.+-... +......-..... +
T Consensus 140 ~i~vwd~~~~~~~~~~~~h~~~v--~~~~~~~~~l~s~~~d---g~i~vwd~~-~~~~~~~----~~~h~~~v~~~~~-~ 208 (445)
T 2ovr_B 140 TLKVWSAVTGKCLRTLVGHTGGV--WSSQMRDNIIISGSTD---RTLKVWNAE-TGECIHT----LYGHTSTVRCMHL-H 208 (445)
T ss_dssp CEEEEETTTCCEEEECCCCSSCE--EEEEEETTEEEEEETT---SCEEEEETT-TTEEEEE----ECCCSSCEEEEEE-E
T ss_pred cEEEEECCCCcEEEEEcCCCCCE--EEEEecCCEEEEEeCC---CeEEEEECC-cCcEEEE----ECCCCCcEEEEEe-c
Confidence 36789988776443211221111 1122247788888763 478899987 5432211 2111111223334 5
Q ss_pred CcEEEEcCccCCeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEccc--eEEEeccCCeE
Q 043369 166 GKIIVVGGRFQFTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDR--AILLDYVNNRV 242 (526)
Q Consensus 166 G~v~viGG~~~~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~~--~~~yDp~t~~w 242 (526)
++.++.|+.++ .+.+| ..+.. .-..+. .. ..+...+..+|+.++.|+.+ ..+||..+.+.
T Consensus 209 ~~~l~s~s~dg-~i~~wd~~~~~----~~~~~~---~~---------~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 271 (445)
T 2ovr_B 209 EKRVVSGSRDA-TLRVWDIETGQ----CLHVLM---GH---------VAAVRCVQYDGRRVVSGAYDFMVKVWDPETETC 271 (445)
T ss_dssp TTEEEEEETTS-EEEEEESSSCC----EEEEEE---CC---------SSCEEEEEECSSCEEEEETTSCEEEEEGGGTEE
T ss_pred CCEEEEEeCCC-EEEEEECCCCc----EEEEEc---CC---------cccEEEEEECCCEEEEEcCCCEEEEEECCCCcE
Confidence 77788887664 56677 44331 111111 10 01223344488888888754 67899988775
Q ss_pred EEeccCCCCCCCCccCCCCceeecccccccccccccCCCCCccCcEEEEEcCCCCCCCchhhhhhcccccccceEEEEee
Q 043369 243 MKNYPVMPGGISRNYPSTGSSVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTIT 322 (526)
Q Consensus 243 ~~~~p~~p~~~~r~y~~~g~~v~lp~~~~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~ 322 (526)
...+ ... .. ....+ ..+++.+++|+.+. .+..+|+.
T Consensus 272 ~~~~---~~~--~~----~v~~~------------------~~~~~~l~~~~~d~-----------------~i~i~d~~ 307 (445)
T 2ovr_B 272 LHTL---QGH--TN----RVYSL------------------QFDGIHVVSGSLDT-----------------SIRVWDVE 307 (445)
T ss_dssp EEEE---CCC--SS----CEEEE------------------EECSSEEEEEETTS-----------------CEEEEETT
T ss_pred eEEe---cCC--CC----ceEEE------------------EECCCEEEEEeCCC-----------------eEEEEECC
Confidence 4333 211 00 11111 02566777777541 34567764
Q ss_pred cCCCCceecccCccccccceEEeCCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCcEe-ecCCCCcccccccccee
Q 043369 323 AQNPKWEMEEMPLNRVMGDMILLPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINRFR-ILSPSLIPRLYHSTAHL 401 (526)
Q Consensus 323 ~~~~~W~~~~M~~~R~~~~~vvLpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~Wt-~~a~~~~~R~yhs~a~L 401 (526)
......+ +.........+ -++++.+++|+.+ | .+.+||..+.+-. .+.... .. ...+..+
T Consensus 308 ~~~~~~~---~~~~~~~v~~~-~~~~~~l~~~~~d-g------------~i~vwd~~~~~~~~~~~~~~-~~-~~~v~~~ 368 (445)
T 2ovr_B 308 TGNCIHT---LTGHQSLTSGM-ELKDNILVSGNAD-S------------TVKIWDIKTGQCLQTLQGPN-KH-QSAVTCL 368 (445)
T ss_dssp TCCEEEE---ECCCCSCEEEE-EEETTEEEEEETT-S------------CEEEEETTTCCEEEEECSTT-SC-SSCEEEE
T ss_pred CCCEEEE---EcCCcccEEEE-EEeCCEEEEEeCC-C------------eEEEEECCCCcEEEEEccCC-CC-CCCEEEE
Confidence 3111111 11111112223 3488888888765 2 5789998776422 111100 00 0112233
Q ss_pred cCCCEEEEecCCC
Q 043369 402 LSDGRVLVGGSNP 414 (526)
Q Consensus 402 lpdG~V~v~GG~~ 414 (526)
-.+++.+++|+..
T Consensus 369 ~~~~~~l~s~~~d 381 (445)
T 2ovr_B 369 QFNKNFVITSSDD 381 (445)
T ss_dssp EECSSEEEEEETT
T ss_pred EECCCEEEEEeCC
Confidence 4478888888854
No 94
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=96.17 E-value=1.2 Score=44.42 Aligned_cols=232 Identities=13% Similarity=0.108 Sum_probs=111.4
Q ss_pred EcCCCcEEEEcCCCC--------CccEEEEEcCCC-CCCc---ccccCCCCCcccccce-eEEecCCcEEEEc-CccCCe
Q 043369 113 LLANGVLVQTGGYRL--------GERVVRYLKPCS-DCDW---EEDHQNGLISPRWYAS-NQILPNGKIIVVG-GRFQFT 178 (526)
Q Consensus 113 ~l~~G~l~v~GG~~~--------g~~~v~~ydp~~-t~~W---~~~~~~~m~~~R~y~s-~~~L~dG~v~viG-G~~~~~ 178 (526)
+-+++.+++.|.... ....+++|+... .... .............|.- ++.=+||+.++++ |....+
T Consensus 79 ~~~~~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~ 158 (365)
T 4h5i_A 79 IDASKGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAI 158 (365)
T ss_dssp EEEETTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCE
T ss_pred EEeCCCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCE
Confidence 345788888886532 124577776431 1111 1110001111222333 3334689987664 444457
Q ss_pred EEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEcc-ceEEEeccCCeEEEeccCCCCCCCCc
Q 043369 179 YEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFAND-RAILLDYVNNRVMKNYPVMPGGISRN 256 (526)
Q Consensus 179 ~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~-~~~~yDp~t~~w~~~~p~~p~~~~r~ 256 (526)
+.+| +.+. ..... +.... ..+ .+...+||++++.+.. ...+++..+++...... ... ..
T Consensus 159 i~iwd~~~~-----~~~~~--~~~~~-------~V~-~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~-~~~---~~ 219 (365)
T 4h5i_A 159 MRIIDPSDL-----TEKFE--IETRG-------EVK-DLHFSTDGKVVAYITGSSLEVISTVTGSCIARKT-DFD---KN 219 (365)
T ss_dssp EEEEETTTT-----EEEEE--EECSS-------CCC-EEEECTTSSEEEEECSSCEEEEETTTCCEEEEEC-CCC---TT
T ss_pred EEEeECCCC-----cEEEE--eCCCC-------ceE-EEEEccCCceEEeccceeEEEEEeccCcceeeee-cCC---CC
Confidence 7888 6544 22111 11110 112 1334679999988764 45677777766432111 111 11
Q ss_pred cCCCCceeecccccccccccccCCCCCccCcEEEEEcCCCCCCCchhhhhhcccccccceEEEEeecCCCCceec---cc
Q 043369 257 YPSTGSSVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTITAQNPKWEME---EM 333 (526)
Q Consensus 257 y~~~g~~v~lp~~~~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~---~M 333 (526)
....-+... -+++.++.++.+.+. ...+..+|... ...... .+
T Consensus 220 ----~~v~~v~fs---------------pdg~~l~~~s~d~~~-------------~~~i~~~~~~~--~~~~~~~~~~~ 265 (365)
T 4h5i_A 220 ----WSLSKINFI---------------ADDTVLIAASLKKGK-------------GIVLTKISIKS--GNTSVLRSKQV 265 (365)
T ss_dssp ----EEEEEEEEE---------------ETTEEEEEEEESSSC-------------CEEEEEEEEET--TEEEEEEEEEE
T ss_pred ----CCEEEEEEc---------------CCCCEEEEEecCCcc-------------eeEEeeccccc--ceecceeeeee
Confidence 100011111 277888877654211 11223345432 222211 11
Q ss_pred Cc-cccccceEEeCCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCcEeecCCCCccccccc----cceecCCCEEE
Q 043369 334 PL-NRVMGDMILLPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINRFRILSPSLIPRLYHS----TAHLLSDGRVL 408 (526)
Q Consensus 334 ~~-~R~~~~~vvLpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~Wt~~a~~~~~R~yhs----~a~LlpdG~V~ 408 (526)
.. ...-.+...-|||+++++|+.+ + ++.+||..+.+-.. .. ...|. ....-|||+.+
T Consensus 266 ~~~~~~V~~~~~Spdg~~lasgs~D-~------------~V~iwd~~~~~~~~--~~---~~gH~~~V~~v~fSpdg~~l 327 (365)
T 4h5i_A 266 TNRFKGITSMDVDMKGELAVLASND-N------------SIALVKLKDLSMSK--IF---KQAHSFAITEVTISPDSTYV 327 (365)
T ss_dssp ESSCSCEEEEEECTTSCEEEEEETT-S------------CEEEEETTTTEEEE--EE---TTSSSSCEEEEEECTTSCEE
T ss_pred cCCCCCeEeEEECCCCCceEEEcCC-C------------EEEEEECCCCcEEE--Ee---cCcccCCEEEEEECCCCCEE
Confidence 11 1111122356999999999865 2 57899988764221 10 11232 23356999999
Q ss_pred EecCCCC
Q 043369 409 VGGSNPN 415 (526)
Q Consensus 409 v~GG~~~ 415 (526)
+.|+..+
T Consensus 328 aS~S~D~ 334 (365)
T 4h5i_A 328 ASVSAAN 334 (365)
T ss_dssp EEEETTS
T ss_pred EEEeCCC
Confidence 9998643
No 95
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=96.14 E-value=0.74 Score=42.93 Aligned_cols=82 Identities=13% Similarity=0.105 Sum_probs=50.5
Q ss_pred eEEEEeCCCCcEEeCccCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCC-CCcccccCCCCCcccccceeEEec
Q 043369 86 HAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSD-CDWEEDHQNGLISPRWYASNQILP 164 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t-~~W~~~~~~~m~~~R~y~s~~~L~ 164 (526)
...+||+.+++.+.+... .........-+||+.+++++. ..+.++|.. + .+.... ............+.-+
T Consensus 23 ~i~~~d~~~~~~~~~~~~-~~~v~~~~~spdg~~l~~~~~----~~i~~~d~~-~~~~~~~~--~~~~~~~~~~~~~~sp 94 (297)
T 2ojh_A 23 SIEIFNIRTRKMRVVWQT-PELFEAPNWSPDGKYLLLNSE----GLLYRLSLA-GDPSPEKV--DTGFATICNNDHGISP 94 (297)
T ss_dssp EEEEEETTTTEEEEEEEE-SSCCEEEEECTTSSEEEEEET----TEEEEEESS-SCCSCEEC--CCTTCCCBCSCCEECT
T ss_pred eEEEEeCCCCceeeeccC-CcceEeeEECCCCCEEEEEcC----CeEEEEeCC-CCCCceEe--ccccccccccceEECC
Confidence 567899988887755432 222233456789999888763 478999988 6 555444 1121112223345556
Q ss_pred CCcEEEEcCcc
Q 043369 165 NGKIIVVGGRF 175 (526)
Q Consensus 165 dG~v~viGG~~ 175 (526)
||+.++.++..
T Consensus 95 dg~~l~~~~~~ 105 (297)
T 2ojh_A 95 DGALYAISDKV 105 (297)
T ss_dssp TSSEEEEEECT
T ss_pred CCCEEEEEEeC
Confidence 89888887743
No 96
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=96.11 E-value=0.95 Score=49.39 Aligned_cols=87 Identities=13% Similarity=0.135 Sum_probs=49.4
Q ss_pred eEEEEeCCCCcE------EeCccCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCC-cccccc
Q 043369 86 HAVEFDPITRKV------RPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLI-SPRWYA 158 (526)
Q Consensus 86 ~~~~yDp~t~~w------~~~~~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~-~~R~y~ 158 (526)
...+||..++.- +.+ ..|..........++|+++++|+.+ ..+++||.. +..-... +. ....-.
T Consensus 406 ~i~~W~~~~~~~~~~~~~~~~-~~h~~~v~~v~~s~~g~~l~sgs~D---g~v~vwd~~-~~~~~~~----~~~h~~~v~ 476 (694)
T 3dm0_A 406 SIILWKLTKDDKAYGVAQRRL-TGHSHFVEDVVLSSDGQFALSGSWD---GELRLWDLA-AGVSTRR----FVGHTKDVL 476 (694)
T ss_dssp EEEEEECCCSTTCSCEEEEEE-ECCSSCEEEEEECTTSSEEEEEETT---SEEEEEETT-TTEEEEE----EECCSSCEE
T ss_pred cEEEEEccCCCccccccccee-cCCCCcEEEEEECCCCCEEEEEeCC---CcEEEEECC-CCcceeE----EeCCCCCEE
Confidence 466787765321 111 1233333334566799999999874 579999987 4432111 11 111122
Q ss_pred eeEEecCCcEEEEcCccCCeEEEE
Q 043369 159 SNQILPNGKIIVVGGRFQFTYEFI 182 (526)
Q Consensus 159 s~~~L~dG~v~viGG~~~~~~E~y 182 (526)
+++.-+||+.++.|+.++ ++.+|
T Consensus 477 ~~~~s~~~~~l~s~s~D~-~i~iw 499 (694)
T 3dm0_A 477 SVAFSLDNRQIVSASRDR-TIKLW 499 (694)
T ss_dssp EEEECTTSSCEEEEETTS-CEEEE
T ss_pred EEEEeCCCCEEEEEeCCC-EEEEE
Confidence 344456888888888764 46666
No 97
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.07 E-value=1.4 Score=44.25 Aligned_cols=134 Identities=10% Similarity=0.033 Sum_probs=69.5
Q ss_pred eEEEEeCCCCcEEeCccCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCC-cccccceeEEec
Q 043369 86 HAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLI-SPRWYASNQILP 164 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~-~~R~y~s~~~L~ 164 (526)
...+||..+++....-..+.... ..+..++.++++|+.. ..+.+||.. ...-... .+. ....-.+++..+
T Consensus 157 ~i~iwd~~~~~~~~~~~~~~~~v--~~~~~~~~~l~~~~~d---g~i~i~d~~-~~~~~~~---~~~~~~~~v~~~~~~~ 227 (401)
T 4aez_A 157 LVDIYDVESQTKLRTMAGHQARV--GCLSWNRHVLSSGSRS---GAIHHHDVR-IANHQIG---TLQGHSSEVCGLAWRS 227 (401)
T ss_dssp CEEEEETTTCCEEEEECCCSSCE--EEEEEETTEEEEEETT---SEEEEEETT-SSSCEEE---EEECCSSCEEEEEECT
T ss_pred eEEEEECcCCeEEEEecCCCCce--EEEEECCCEEEEEcCC---CCEEEEecc-cCcceee---EEcCCCCCeeEEEEcC
Confidence 46788888776433222222111 1122378888988863 578899976 3221111 111 111223445556
Q ss_pred CCcEEEEcCccCCeEEEE-cCCCCCCCccee-ecCCccccCCCCCCCCCCcceEEEecC-CcEEEEEc----cceEEEec
Q 043369 165 NGKIIVVGGRFQFTYEFI-PRTSDSDRKILY-QLPFLKETMHSPKIPNNLYPFLHLSTD-GNLFIFAN----DRAILLDY 237 (526)
Q Consensus 165 dG~v~viGG~~~~~~E~y-P~~~~~~~~~w~-~~p~l~~~~~~~~~~~~~yp~~~~~~d-G~Iy~~Gg----~~~~~yDp 237 (526)
+|+.+++|+.++ .+.+| ..+. ... .+.. .. .... .+...++ ..+++.|+ ....+||.
T Consensus 228 ~~~~l~s~~~d~-~v~iwd~~~~-----~~~~~~~~--~~-------~~v~-~~~~~p~~~~ll~~~~gs~d~~i~i~d~ 291 (401)
T 4aez_A 228 DGLQLASGGNDN-VVQIWDARSS-----IPKFTKTN--HN-------AAVK-AVAWCPWQSNLLATGGGTMDKQIHFWNA 291 (401)
T ss_dssp TSSEEEEEETTS-CEEEEETTCS-----SEEEEECC--CS-------SCCC-EEEECTTSTTEEEEECCTTTCEEEEEET
T ss_pred CCCEEEEEeCCC-eEEEccCCCC-----CccEEecC--Cc-------ceEE-EEEECCCCCCEEEEecCCCCCEEEEEEC
Confidence 899999998764 46677 4332 111 1110 00 0111 1233454 46777764 34678998
Q ss_pred cCCeEEE
Q 043369 238 VNNRVMK 244 (526)
Q Consensus 238 ~t~~w~~ 244 (526)
.+++...
T Consensus 292 ~~~~~~~ 298 (401)
T 4aez_A 292 ATGARVN 298 (401)
T ss_dssp TTCCEEE
T ss_pred CCCCEEE
Confidence 8877553
No 98
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=96.07 E-value=0.25 Score=52.88 Aligned_cols=122 Identities=11% Similarity=0.057 Sum_probs=70.8
Q ss_pred CcEEEcccCC--ccceeEEEEecCCeEEEEecccCCCCCccCCCCccccCccccCCCCcceEEEEeCCCCcEEe-CccCC
Q 043369 28 GKWKLLKRSI--GVSAMHMALLPNDRIIAFDRSHFGPSNITLPQGKCIKGVELETSDCYAHAVEFDPITRKVRP-LTIQT 104 (526)
Q Consensus 28 g~W~~~~~~~--~v~~~~~a~l~~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~yDp~t~~w~~-~~~~~ 104 (526)
+.|+.+.+.. +-.++|. +-+++++|+.+..+ ..+.+||..+++... +....
T Consensus 126 ~s~~~~~~~~~~~~~~~~~-~~p~~~~~vs~~~d-------------------------~~V~v~D~~t~~~~~~i~~g~ 179 (543)
T 1nir_A 126 ESWKVLVKPEDRPKKQLND-LDLPNLFSVTLRDA-------------------------GQIALVDGDSKKIVKVIDTGY 179 (543)
T ss_dssp HHCEESSCGGGSCSSCCSC-CCGGGEEEEEEGGG-------------------------TEEEEEETTTCCEEEEEECST
T ss_pred hhhccccccccCCcccccc-cCCCCEEEEEEcCC-------------------------CeEEEEECCCceEEEEEecCc
Confidence 5566553211 2234554 34688888775432 146789999887643 22222
Q ss_pred ccccccceEcCCCcEEEEcCCCCCccEEEEEcC--CCCCCcccccCCCCCcccccceeEEec----CCcEEEEcCccCCe
Q 043369 105 DTWCSSGALLANGVLVQTGGYRLGERVVRYLKP--CSDCDWEEDHQNGLISPRWYASNQILP----NGKIIVVGGRFQFT 178 (526)
Q Consensus 105 ~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp--~~t~~W~~~~~~~m~~~R~y~s~~~L~----dG~v~viGG~~~~~ 178 (526)
. ..+.++-+||+.+.+++.. ..+.+||. . +.+- . ..+....+-.+++.-+ ||+.++++.....+
T Consensus 180 ~--~~~v~~spdg~~l~v~~~d---~~V~v~D~~~~-t~~~--~--~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~ 249 (543)
T 1nir_A 180 A--VHISRMSASGRYLLVIGRD---ARIDMIDLWAK-EPTK--V--AEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQ 249 (543)
T ss_dssp T--EEEEEECTTSCEEEEEETT---SEEEEEETTSS-SCEE--E--EEEECCSEEEEEEECCSTTCTTTEEEEEEEESSE
T ss_pred c--cceEEECCCCCEEEEECCC---CeEEEEECcCC-CCcE--E--EEEecCCCcceEEeCCCcCCCCCEEEEEEccCCe
Confidence 2 2334567899887777653 68999998 4 4332 2 2233333323344445 89888888766566
Q ss_pred EEEE-cCC
Q 043369 179 YEFI-PRT 185 (526)
Q Consensus 179 ~E~y-P~~ 185 (526)
+.+| ..+
T Consensus 250 v~v~D~~t 257 (543)
T 1nir_A 250 FAIMDGET 257 (543)
T ss_dssp EEEEETTT
T ss_pred EEEEeccc
Confidence 7777 444
No 99
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=96.00 E-value=0.11 Score=51.69 Aligned_cols=191 Identities=10% Similarity=0.036 Sum_probs=99.5
Q ss_pred eeEEecCCcEEEEcCccCCeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEccc--eEEE
Q 043369 159 SNQILPNGKIIVVGGRFQFTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDR--AILL 235 (526)
Q Consensus 159 s~~~L~dG~v~viGG~~~~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~~--~~~y 235 (526)
+++--+||++++.||.++ ++.+| ...+ .+.....+..... .... .+...++|+.++.|+.+ ..+|
T Consensus 21 ~l~~sp~g~~las~~~D~-~i~iw~~~~~-----~~~~~~~~~~~h~-----~~v~-~~~~sp~g~~l~s~s~D~~v~iw 88 (345)
T 3fm0_A 21 FLAWNPAGTLLASCGGDR-RIRIWGTEGD-----SWICKSVLSEGHQ-----RTVR-KVAWSPCGNYLASASFDATTCIW 88 (345)
T ss_dssp EEEECTTSSCEEEEETTS-CEEEEEEETT-----EEEEEEEECSSCS-----SCEE-EEEECTTSSEEEEEETTSCEEEE
T ss_pred EEEECCCCCEEEEEcCCC-eEEEEEcCCC-----cceeeeeeccccC-----CcEE-EEEECCCCCEEEEEECCCcEEEE
Confidence 344456899999888764 46677 4433 3321111101000 0111 12345799999998754 5788
Q ss_pred eccCCeEEEeccCCCCCCCCccCCCCceeecccccccccccccCCCCCccCcEEEEEcCCCCCCCchhhhhhcccccccc
Q 043369 236 DYVNNRVMKNYPVMPGGISRNYPSTGSSVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKS 315 (526)
Q Consensus 236 Dp~t~~w~~~~p~~p~~~~r~y~~~g~~v~lp~~~~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s 315 (526)
|..++.+. .+..+... .+...-+... .++++++.|+.+. +
T Consensus 89 ~~~~~~~~-~~~~~~~h-------~~~v~~v~~s---------------p~~~~l~s~s~D~-----------------~ 128 (345)
T 3fm0_A 89 KKNQDDFE-CVTTLEGH-------ENEVKSVAWA---------------PSGNLLATCSRDK-----------------S 128 (345)
T ss_dssp EECCC-EE-EEEEECCC-------SSCEEEEEEC---------------TTSSEEEEEETTS-----------------C
T ss_pred EccCCCeE-EEEEccCC-------CCCceEEEEe---------------CCCCEEEEEECCC-----------------e
Confidence 88776543 12222221 1111111111 2677888887652 3
Q ss_pred eEEEEeecCCCCceec-ccCc-cccccceEEeCCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCcEeecCCCCccc
Q 043369 316 CGRLTITAQNPKWEME-EMPL-NRVMGDMILLPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINRFRILSPSLIPR 393 (526)
Q Consensus 316 ~~~~d~~~~~~~W~~~-~M~~-~R~~~~~vvLpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~Wt~~a~~~~~R 393 (526)
+..+|+.. ...++.. .+.. ...-......|+|++++.|+.+ + ++.+||..+++|.....+.--.
T Consensus 129 v~iwd~~~-~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d-~------------~i~~w~~~~~~~~~~~~~~~h~ 194 (345)
T 3fm0_A 129 VWVWEVDE-EDEYECVSVLNSHTQDVKHVVWHPSQELLASASYD-D------------TVKLYREEEDDWVCCATLEGHE 194 (345)
T ss_dssp EEEEEECT-TSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETT-S------------CEEEEEEETTEEEEEEEECCCS
T ss_pred EEEEECCC-CCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCC-C------------cEEEEEecCCCEEEEEEecCCC
Confidence 55677653 2233322 1111 1111123456899999998865 2 5789999888876443322111
Q ss_pred cccccceecCCCEEEEecCCCC
Q 043369 394 LYHSTAHLLSDGRVLVGGSNPN 415 (526)
Q Consensus 394 ~yhs~a~LlpdG~V~v~GG~~~ 415 (526)
..-.....-|||+.++.|+...
T Consensus 195 ~~v~~l~~sp~g~~l~s~s~D~ 216 (345)
T 3fm0_A 195 STVWSLAFDPSGQRLASCSDDR 216 (345)
T ss_dssp SCEEEEEECTTSSEEEEEETTS
T ss_pred CceEEEEECCCCCEEEEEeCCC
Confidence 1112234568999999998644
No 100
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=96.00 E-value=0.98 Score=43.76 Aligned_cols=91 Identities=10% Similarity=-0.023 Sum_probs=50.6
Q ss_pred eEEEEeCCCCcEEe--CccCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEE-
Q 043369 86 HAVEFDPITRKVRP--LTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQI- 162 (526)
Q Consensus 86 ~~~~yDp~t~~w~~--~~~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~- 162 (526)
...+||..+..... .-..+..........++|+.+++|+.+ ..+.+||.. +.+.... . .....-.+++.
T Consensus 65 ~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d---g~v~iwd~~-~~~~~~~--~--~~~~~v~~~~~~ 136 (368)
T 3mmy_A 65 DVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCD---KTAKMWDLS-SNQAIQI--A--QHDAPVKTIHWI 136 (368)
T ss_dssp EEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT---SEEEEEETT-TTEEEEE--E--ECSSCEEEEEEE
T ss_pred cEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCC---CcEEEEEcC-CCCceee--c--cccCceEEEEEE
Confidence 36778887633221 111122222234556799999998763 578999987 5543332 1 11111122232
Q ss_pred -ecCCcEEEEcCccCCeEEEE-cCC
Q 043369 163 -LPNGKIIVVGGRFQFTYEFI-PRT 185 (526)
Q Consensus 163 -L~dG~v~viGG~~~~~~E~y-P~~ 185 (526)
-++++.++.|+.++ .+.+| ..+
T Consensus 137 ~~~~~~~l~~~~~dg-~i~vwd~~~ 160 (368)
T 3mmy_A 137 KAPNYSCVMTGSWDK-TLKFWDTRS 160 (368)
T ss_dssp ECSSCEEEEEEETTS-EEEEECSSC
T ss_pred eCCCCCEEEEccCCC-cEEEEECCC
Confidence 46888888888764 46677 444
No 101
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=95.98 E-value=1.2 Score=42.78 Aligned_cols=88 Identities=13% Similarity=0.130 Sum_probs=46.6
Q ss_pred EEEEeCCCCcE---EeCcc--CCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeE
Q 043369 87 AVEFDPITRKV---RPLTI--QTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQ 161 (526)
Q Consensus 87 ~~~yDp~t~~w---~~~~~--~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~ 161 (526)
..+||..+.+. .+... .+..........+||+.+++|+.+ ..+.+++.. ....... ............
T Consensus 63 i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d---~~i~~~~~~-~~~~~~~---~~~~~~~~~~~~ 135 (340)
T 4aow_A 63 IIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWD---GTLRLWDLT-TGTTTRR---FVGHTKDVLSVA 135 (340)
T ss_dssp EEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETT---SEEEEEETT-TTEEEEE---EECCSSCEEEEE
T ss_pred EEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEccc---ccceEEeec-ccceeee---ecCCCCceeEEE
Confidence 56788765432 22221 122222234456799999999874 467778876 4333222 011112223344
Q ss_pred EecCCcEEEEcCccCCeEEEE
Q 043369 162 ILPNGKIIVVGGRFQFTYEFI 182 (526)
Q Consensus 162 ~L~dG~v~viGG~~~~~~E~y 182 (526)
..++++.++.|+.++ .+.+|
T Consensus 136 ~~~~~~~l~s~s~d~-~~~~~ 155 (340)
T 4aow_A 136 FSSDNRQIVSGSRDK-TIKLW 155 (340)
T ss_dssp ECTTSSCEEEEETTS-CEEEE
T ss_pred EeecCccceeecCCC-eEEEE
Confidence 456788888887664 34455
No 102
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=95.91 E-value=0.75 Score=46.29 Aligned_cols=137 Identities=18% Similarity=0.144 Sum_probs=72.2
Q ss_pred eEEEEeCCCCcEEeCccCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEec-
Q 043369 86 HAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILP- 164 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~- 164 (526)
...+||..+++....-..+..........++|+.+++|+.+ ..+++||.. +.+.... +.....-.+++.-+
T Consensus 146 ~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d---~~v~iwd~~-~~~~~~~----~~~~~~v~~~~~~~~ 217 (393)
T 1erj_A 146 LIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGD---RTVRIWDLR-TGQCSLT----LSIEDGVTTVAVSPG 217 (393)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT---SEEEEEETT-TTEEEEE----EECSSCEEEEEECST
T ss_pred eEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCC---CcEEEEECC-CCeeEEE----EEcCCCcEEEEEECC
Confidence 36789988876543322233222234556789999998863 579999987 5443221 11122222344444
Q ss_pred CCcEEEEcCccCCeEEEE-cCCCCCCCcceeecCCccc--cCCCCCCCCCCcceEEEecCCcEEEEEccc--eEEEeccC
Q 043369 165 NGKIIVVGGRFQFTYEFI-PRTSDSDRKILYQLPFLKE--TMHSPKIPNNLYPFLHLSTDGNLFIFANDR--AILLDYVN 239 (526)
Q Consensus 165 dG~v~viGG~~~~~~E~y-P~~~~~~~~~w~~~p~l~~--~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~~--~~~yDp~t 239 (526)
||+.++.|+.++ .+.+| ..+.. .-..+..... ..+ ....+ .+...++|+.++.|+.+ ..+||..+
T Consensus 218 ~~~~l~~~s~d~-~v~iwd~~~~~----~~~~~~~~~~~~~~h----~~~v~-~v~~~~~g~~l~s~s~d~~v~~wd~~~ 287 (393)
T 1erj_A 218 DGKYIAAGSLDR-AVRVWDSETGF----LVERLDSENESGTGH----KDSVY-SVVFTRDGQSVVSGSLDRSVKLWNLQN 287 (393)
T ss_dssp TCCEEEEEETTS-CEEEEETTTCC----EEEEEC------CCC----SSCEE-EEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred CCCEEEEEcCCC-cEEEEECCCCc----EEEeecccccCCCCC----CCCEE-EEEECCCCCEEEEEeCCCEEEEEECCC
Confidence 889999988764 46777 44431 1111110000 000 00111 12345689999888754 56788765
Q ss_pred C
Q 043369 240 N 240 (526)
Q Consensus 240 ~ 240 (526)
.
T Consensus 288 ~ 288 (393)
T 1erj_A 288 A 288 (393)
T ss_dssp -
T ss_pred C
Confidence 4
No 103
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=95.91 E-value=0.17 Score=56.29 Aligned_cols=90 Identities=12% Similarity=0.083 Sum_probs=52.0
Q ss_pred eEEEEeCCCCcEEeCccC--CccccccceEcCC--CcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCc-cccccee
Q 043369 86 HAVEFDPITRKVRPLTIQ--TDTWCSSGALLAN--GVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLIS-PRWYASN 160 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~--~~~fc~~~~~l~~--G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~-~R~y~s~ 160 (526)
...+||..++++..+... +..........++ |..+++|+.+ ..+.+||.. +.+|... ..+.. ...-.++
T Consensus 32 ~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~D---g~I~vwd~~-~~~~~~~--~~~~~h~~~V~~v 105 (753)
T 3jro_A 32 TIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD---GKVLIWKEE-NGRWSQI--AVHAVHSASVNSV 105 (753)
T ss_dssp EEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETT---SCEEEEEEE-TTEEEEE--EEECCCSSCEEEE
T ss_pred cEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCC---CeEEEEECC-CCccccc--ccccCCCCCeEEE
Confidence 366788776666554432 2221222233455 8999999873 468888887 6666544 22221 2222334
Q ss_pred EEecC--CcEEEEcCccCCeEEEE
Q 043369 161 QILPN--GKIIVVGGRFQFTYEFI 182 (526)
Q Consensus 161 ~~L~d--G~v~viGG~~~~~~E~y 182 (526)
+..++ |++++.|+.++ .+.+|
T Consensus 106 ~~sp~~~~~~l~sgs~dg-~I~vw 128 (753)
T 3jro_A 106 QWAPHEYGPLLLVASSDG-KVSVV 128 (753)
T ss_dssp EECCGGGCSEEEEEETTS-EEEEE
T ss_pred EECCCCCCCEEEEEeCCC-cEEEE
Confidence 44556 88999998764 45566
No 104
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=95.88 E-value=1.5 Score=42.97 Aligned_cols=193 Identities=12% Similarity=0.035 Sum_probs=93.3
Q ss_pred eEEEEecCCeEEEEecccCCCCCccCCCCccccCcc-ccCCCCcceEEEEeCCCCcEEeCccCCc-cccccceEcCCCcE
Q 043369 42 MHMALLPNDRIIAFDRSHFGPSNITLPQGKCIKGVE-LETSDCYAHAVEFDPITRKVRPLTIQTD-TWCSSGALLANGVL 119 (526)
Q Consensus 42 ~~~a~l~~gkv~~~gg~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~yDp~t~~w~~~~~~~~-~fc~~~~~l~~G~l 119 (526)
...|+-++|++|+.+..+..-....+. +....... .+.. ......+||+.+++......... ....+.++.++|++
T Consensus 27 ~~va~d~~G~l~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l 104 (329)
T 3fvz_A 27 SGVALDSKNNLVIFHRGDHVWDGNSFD-SKFVYQQRGLGPI-EEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNY 104 (329)
T ss_dssp EEEEECTTCCEEEEECTTCCCCTTSBC-TTSCBSCGGGCSC-CSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCE
T ss_pred eEEEECCCCCEEEEeCCCCeEEeeccC-cceeecccccccc-cCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCCE
Confidence 445556899999987754211111110 00000000 0000 01247889999888754322111 12233455679999
Q ss_pred EEEcCCCCCccEEEEEcCCCCCC-cc-cccCCCC-----Ccccccce-eEEec-CCcEEEEcCccCCeEEEEcCCCCCCC
Q 043369 120 VQTGGYRLGERVVRYLKPCSDCD-WE-EDHQNGL-----ISPRWYAS-NQILP-NGKIIVVGGRFQFTYEFIPRTSDSDR 190 (526)
Q Consensus 120 ~v~GG~~~g~~~v~~ydp~~t~~-W~-~~~~~~m-----~~~R~y~s-~~~L~-dG~v~viGG~~~~~~E~yP~~~~~~~ 190 (526)
|++... ...+.+||+. ... .. .. .... ...-.+|. ++.-+ +|++||..+.....+.+|...+.
T Consensus 105 ~v~d~~---~~~v~~~~~~-g~~~~~~~~-~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~--- 176 (329)
T 3fvz_A 105 WVTDVA---LHQVFKLDPH-SKEGPLLIL-GRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGK--- 176 (329)
T ss_dssp EEEETT---TTEEEEECTT-CSSCCSEEE-SBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSC---
T ss_pred EEEECC---CCEEEEEeCC-CCeEEEEEe-cccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCC---
Confidence 998754 3579999986 431 11 11 0000 00111333 44445 79999998643445667732221
Q ss_pred cceeecCCccccCCCCCCCCCCcceEEE-ecC-CcEEEEEc--cceEEEeccCCeEEEec
Q 043369 191 KILYQLPFLKETMHSPKIPNNLYPFLHL-STD-GNLFIFAN--DRAILLDYVNNRVMKNY 246 (526)
Q Consensus 191 ~~w~~~p~l~~~~~~~~~~~~~yp~~~~-~~d-G~Iy~~Gg--~~~~~yDp~t~~w~~~~ 246 (526)
....+... ...+......-.+|...+ -++ |+||+... ....+||+.+++..+.+
T Consensus 177 -~~~~~~~~-g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~ 234 (329)
T 3fvz_A 177 -FVTQWGEE-SSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREI 234 (329)
T ss_dssp -EEEEECEE-CCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred -EEEEeccC-CCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEE
Confidence 11111100 000000000112455444 456 89998864 45789999877765444
No 105
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=95.85 E-value=1.8 Score=44.15 Aligned_cols=219 Identities=14% Similarity=0.097 Sum_probs=110.6
Q ss_pred eEEEEeCCCCcEEeCccCCcc--ccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCC-------------
Q 043369 86 HAVEFDPITRKVRPLTIQTDT--WCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNG------------- 150 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~~~~--fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~------------- 150 (526)
...+||..+++....-..+.. .|-.-....++..+++|+.+ ..+.+||.. +..-.......
T Consensus 184 ~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d---~~i~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~ 259 (464)
T 3v7d_B 184 TVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRD---NTLHVWKLP-KESSVPDHGEEHDYPLVFHTPEEN 259 (464)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETT---SCEEEEECC-CCCCC------CCSSEEESCGGGC
T ss_pred CEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCC---CcEEEeeCC-CCcccccccccCCcceEeeccCCC
Confidence 467899887764432222221 12111122578889998863 467788876 43211100000
Q ss_pred ---C--CcccccceeEEecCCcEEEEcCccCCeEEEE-cCCCCCCCcce-eecCCccccCCCCCCCCCCcceEEEecCCc
Q 043369 151 ---L--ISPRWYASNQILPNGKIIVVGGRFQFTYEFI-PRTSDSDRKIL-YQLPFLKETMHSPKIPNNLYPFLHLSTDGN 223 (526)
Q Consensus 151 ---m--~~~R~y~s~~~L~dG~v~viGG~~~~~~E~y-P~~~~~~~~~w-~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~ 223 (526)
+ ....-....+.-++++.+++|+.++ .+.+| ..+. +. ..+..- . ...+ .+...++|+
T Consensus 260 ~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~-~i~vwd~~~~-----~~~~~~~~~--~-------~~v~-~~~~~~~~~ 323 (464)
T 3v7d_B 260 PYFVGVLRGHMASVRTVSGHGNIVVSGSYDN-TLIVWDVAQM-----KCLYILSGH--T-------DRIY-STIYDHERK 323 (464)
T ss_dssp TTEEEEECCCSSCEEEEEEETTEEEEEETTS-CEEEEETTTT-----EEEEEECCC--S-------SCEE-EEEEETTTT
T ss_pred eEEEEEccCccceEEEEcCCCCEEEEEeCCC-eEEEEECCCC-----cEEEEecCC--C-------CCEE-EEEEcCCCC
Confidence 0 0001111122334788888888765 46667 4332 11 111110 0 0111 234456888
Q ss_pred EEEEEccc--eEEEeccCCeEEEeccCCCCCCCCccCCCCceeecccccccccccccCCCCCccCcEEEEEcCCCCCCCc
Q 043369 224 LFIFANDR--AILLDYVNNRVMKNYPVMPGGISRNYPSTGSSVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNE 301 (526)
Q Consensus 224 Iy~~Gg~~--~~~yDp~t~~w~~~~p~~p~~~~r~y~~~g~~v~lp~~~~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~ 301 (526)
.++.|+.+ ..+||..+++-.+.+ ... .. ....+ . .+++.+++|+.+.
T Consensus 324 ~l~sg~~dg~i~vwd~~~~~~~~~~---~~h--~~----~v~~~-~-----------------~~~~~l~s~s~dg---- 372 (464)
T 3v7d_B 324 RCISASMDTTIRIWDLENGELMYTL---QGH--TA----LVGLL-R-----------------LSDKFLVSAAADG---- 372 (464)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEE---CCC--SS----CEEEE-E-----------------ECSSEEEEEETTS----
T ss_pred EEEEEeCCCcEEEEECCCCcEEEEE---eCC--CC----cEEEE-E-----------------EcCCEEEEEeCCC----
Confidence 88888754 678999887754333 211 10 11111 1 2456777777641
Q ss_pred hhhhhhcccccccceEEEEeecCCCCceecccCccccccceEEeCCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCC
Q 043369 302 NAAEAQIFLPAAKSCGRLTITAQNPKWEMEEMPLNRVMGDMILLPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKIN 381 (526)
Q Consensus 302 ~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M~~~R~~~~~vvLpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~ 381 (526)
++..+|+......+.. ...........-++|++++.|+ + | .+.+||..+.
T Consensus 373 -------------~v~vwd~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~-d-g------------~i~iwd~~~g 422 (464)
T 3v7d_B 373 -------------SIRGWDANDYSRKFSY---HHTNLSAITTFYVSDNILVSGS-E-N------------QFNIYNLRSG 422 (464)
T ss_dssp -------------EEEEEETTTCCEEEEE---ECTTCCCEEEEEECSSEEEEEE-T-T------------EEEEEETTTC
T ss_pred -------------cEEEEECCCCceeeee---cCCCCccEEEEEeCCCEEEEec-C-C------------eEEEEECCCC
Confidence 3556776532212221 1222222334567999999887 3 2 5789999988
Q ss_pred cEee
Q 043369 382 RFRI 385 (526)
Q Consensus 382 ~Wt~ 385 (526)
+-..
T Consensus 423 ~~~~ 426 (464)
T 3v7d_B 423 KLVH 426 (464)
T ss_dssp CEEE
T ss_pred cEEe
Confidence 6543
No 106
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=95.84 E-value=1.1 Score=44.44 Aligned_cols=112 Identities=13% Similarity=0.131 Sum_probs=58.4
Q ss_pred ceEcCCCcEEEEcCCCCCccEEEEEcCCC-CCCcccccCCCCC----cccccceeEEecCCcEEEEcCccCCeEEEE-cC
Q 043369 111 GALLANGVLVQTGGYRLGERVVRYLKPCS-DCDWEEDHQNGLI----SPRWYASNQILPNGKIIVVGGRFQFTYEFI-PR 184 (526)
Q Consensus 111 ~~~l~~G~l~v~GG~~~g~~~v~~ydp~~-t~~W~~~~~~~m~----~~R~y~s~~~L~dG~v~viGG~~~~~~E~y-P~ 184 (526)
.-++.+++||+.... ..+..||+.+ ...|......... ......+..++.+|+||+.... ..+-.+ +.
T Consensus 48 ~p~v~~~~v~~~~~~----g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~--g~l~a~d~~ 121 (376)
T 3q7m_A 48 HPALADNVVYAADRA----GLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEK--AQVYALNTS 121 (376)
T ss_dssp CCEEETTEEEEECTT----SEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETT--SEEEEEETT
T ss_pred ccEEECCEEEEEcCC----CeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCC--CEEEEEECC
Confidence 445568888887543 3788999862 2357654111100 0111223344558888885432 234455 55
Q ss_pred CCCCCCcceee-cCCccccCCCCCCCCCCcceEEEecCCcEEEEEcc-ceEEEeccCCe--EEE
Q 043369 185 TSDSDRKILYQ-LPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFAND-RAILLDYVNNR--VMK 244 (526)
Q Consensus 185 ~~~~~~~~w~~-~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~-~~~~yDp~t~~--w~~ 244 (526)
++. ..|.. ++. .. ..-| ++.+|+||+.... ....||+++++ |..
T Consensus 122 tG~---~~W~~~~~~--~~--------~~~p---~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~ 169 (376)
T 3q7m_A 122 DGT---VAWQTKVAG--EA--------LSRP---VVSDGLVLIHTSNGQLQALNEADGAVKWTV 169 (376)
T ss_dssp TCC---EEEEEECSS--CC--------CSCC---EEETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCC---EEEEEeCCC--ce--------EcCC---EEECCEEEEEcCCCeEEEEECCCCcEEEEE
Confidence 552 25643 221 00 0012 3447888875543 46789998875 653
No 107
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=95.73 E-value=0.43 Score=47.63 Aligned_cols=141 Identities=9% Similarity=0.011 Sum_probs=71.4
Q ss_pred eEEEEeCCCCc------EE-eCc--cCCccccccceEcCC-CcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCc--
Q 043369 86 HAVEFDPITRK------VR-PLT--IQTDTWCSSGALLAN-GVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLIS-- 153 (526)
Q Consensus 86 ~~~~yDp~t~~------w~-~~~--~~~~~fc~~~~~l~~-G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~-- 153 (526)
...+||..+.+ -. .+. ..+..........++ +.++++|+.. ..+.+||.. +.+-... -....
T Consensus 137 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d---g~v~iwd~~-~~~~~~~--~~~~~~~ 210 (416)
T 2pm9_A 137 EIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSS---NFASIWDLK-AKKEVIH--LSYTSPN 210 (416)
T ss_dssp CEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSS---SCEEEEETT-TTEEEEE--ECCCCCS
T ss_pred eEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCC---CCEEEEECC-CCCcceE--Eeccccc
Confidence 46678877665 11 111 112222233445566 7899998763 468899987 5433221 11111
Q ss_pred ---ccccceeEEecCC-cEEEEcCccC--CeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEec-CCcEE
Q 043369 154 ---PRWYASNQILPNG-KIIVVGGRFQ--FTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLST-DGNLF 225 (526)
Q Consensus 154 ---~R~y~s~~~L~dG-~v~viGG~~~--~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~-dG~Iy 225 (526)
...-.+++..++| ++++.|+.++ ..+.+| ..+.. . ....+..... .... .+...+ +++++
T Consensus 211 ~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~----~--~~~~~~~~~~-----~~v~-~~~~s~~~~~~l 278 (416)
T 2pm9_A 211 SGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNAN----T--PLQTLNQGHQ-----KGIL-SLDWCHQDEHLL 278 (416)
T ss_dssp SCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTT----S--CSBCCCSCCS-----SCEE-EEEECSSCSSCE
T ss_pred cccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCC----C--CcEEeecCcc-----Ccee-EEEeCCCCCCeE
Confidence 2222344555566 5788877654 156667 43320 0 0111110000 0111 122345 88988
Q ss_pred EEEccc--eEEEeccCCeEEE
Q 043369 226 IFANDR--AILLDYVNNRVMK 244 (526)
Q Consensus 226 ~~Gg~~--~~~yDp~t~~w~~ 244 (526)
+.|+.+ ..+||..+.+...
T Consensus 279 ~s~~~dg~v~~wd~~~~~~~~ 299 (416)
T 2pm9_A 279 LSSGRDNTVLLWNPESAEQLS 299 (416)
T ss_dssp EEEESSSEEEEECSSSCCEEE
T ss_pred EEEeCCCCEEEeeCCCCccce
Confidence 888754 6789988876543
No 108
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=95.73 E-value=0.83 Score=46.37 Aligned_cols=87 Identities=13% Similarity=0.053 Sum_probs=51.0
Q ss_pred EEEEeCCCCcEEeCccCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCC-CcccccceeEEecC
Q 043369 87 AVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGL-ISPRWYASNQILPN 165 (526)
Q Consensus 87 ~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m-~~~R~y~s~~~L~d 165 (526)
..+||..+.+-...-..+..........++|..+++|+.+ ..+.+||.. +..-... + ....+-..+..-+|
T Consensus 174 i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D---~~i~~wd~~-~~~~~~~----~~~h~~~v~~~~~~~~ 245 (410)
T 1vyh_C 174 IKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRD---KTIKMWEVQ-TGYCVKT----FTGHREWVRMVRPNQD 245 (410)
T ss_dssp CCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETT---SEEEEEETT-TCCEEEE----EECCSSCEEEEEECTT
T ss_pred EEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCC---CeEEEEECC-CCcEEEE----EeCCCccEEEEEECCC
Confidence 4567776655432222233223334566789999999863 579999987 5443221 1 11223334455568
Q ss_pred CcEEEEcCccCCeEEEE
Q 043369 166 GKIIVVGGRFQFTYEFI 182 (526)
Q Consensus 166 G~v~viGG~~~~~~E~y 182 (526)
|++++.|+.++ ++.+|
T Consensus 246 g~~l~s~s~D~-~v~vw 261 (410)
T 1vyh_C 246 GTLIASCSNDQ-TVRVW 261 (410)
T ss_dssp SSEEEEEETTS-CEEEE
T ss_pred CCEEEEEcCCC-eEEEE
Confidence 99999988764 45555
No 109
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=95.72 E-value=2 Score=46.07 Aligned_cols=255 Identities=13% Similarity=0.038 Sum_probs=121.2
Q ss_pred eEEEEeCCCCcEEeCc--cCCccccccceEcCCCcEEEEcCCCCC-ccEEEEEcCCCCCCcccccCCCCC-cccccceeE
Q 043369 86 HAVEFDPITRKVRPLT--IQTDTWCSSGALLANGVLVQTGGYRLG-ERVVRYLKPCSDCDWEEDHQNGLI-SPRWYASNQ 161 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~--~~~~~fc~~~~~l~~G~l~v~GG~~~g-~~~v~~ydp~~t~~W~~~~~~~m~-~~R~y~s~~ 161 (526)
...+||..+++..... ..+.......+.-+||+.++++|.... ...++.+|.. +.. . .+. ..+.-.+++
T Consensus 82 ~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~-~~~-~-----~l~gh~~~v~~v~ 154 (611)
T 1nr0_A 82 NVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTG-TSN-G-----NLTGQARAMNSVD 154 (611)
T ss_dssp EEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTC-CBC-B-----CCCCCSSCEEEEE
T ss_pred CEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCC-CCc-c-----eecCCCCCceEEE
Confidence 4678888654322111 112222223456679998888876321 2467788754 221 1 122 122223444
Q ss_pred EecCCc-EEEEcCccCCeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEccc--eEEEec
Q 043369 162 ILPNGK-IIVVGGRFQFTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDR--AILLDY 237 (526)
Q Consensus 162 ~L~dG~-v~viGG~~~~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~~--~~~yDp 237 (526)
--+++. .++.|+.++ ++.+| ..+. +. ...+.... ...+ .+...+||++++.|+.+ ..+||.
T Consensus 155 f~p~~~~~l~s~s~D~-~v~lwd~~~~-----~~--~~~l~~H~------~~V~-~v~fspdg~~las~s~D~~i~lwd~ 219 (611)
T 1nr0_A 155 FKPSRPFRIISGSDDN-TVAIFEGPPF-----KF--KSTFGEHT------KFVH-SVRYNPDGSLFASTGGDGTIVLYNG 219 (611)
T ss_dssp ECSSSSCEEEEEETTS-CEEEEETTTB-----EE--EEEECCCS------SCEE-EEEECTTSSEEEEEETTSCEEEEET
T ss_pred ECCCCCeEEEEEeCCC-eEEEEECCCC-----eE--eeeecccc------CceE-EEEECCCCCEEEEEECCCcEEEEEC
Confidence 455665 566676654 56666 3221 11 11111100 0111 12345799999998754 678998
Q ss_pred cCCeEEEeccCCCCCCCCccCCCCceeecccccccccccccCCCCCccCcEEEEEcCCCCCCCchhhhhhcccccccceE
Q 043369 238 VNNRVMKNYPVMPGGISRNYPSTGSSVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCG 317 (526)
Q Consensus 238 ~t~~w~~~~p~~p~~~~r~y~~~g~~v~lp~~~~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~ 317 (526)
.+++....+..... +...+.+...-+... -+++.++.|+.+. ++.
T Consensus 220 ~~g~~~~~~~~~~~---~~~~h~~~V~~v~~s---------------pdg~~l~s~s~D~-----------------~v~ 264 (611)
T 1nr0_A 220 VDGTKTGVFEDDSL---KNVAHSGSVFGLTWS---------------PDGTKIASASADK-----------------TIK 264 (611)
T ss_dssp TTCCEEEECBCTTS---SSCSSSSCEEEEEEC---------------TTSSEEEEEETTS-----------------EEE
T ss_pred CCCcEeeeeccccc---cccccCCCEEEEEEC---------------CCCCEEEEEeCCC-----------------eEE
Confidence 88765433311000 100111221111111 2677888887651 345
Q ss_pred EEEeecCCCCceec-ccCcc-ccccceEEeCCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCcEeecCCCCccccc
Q 043369 318 RLTITAQNPKWEME-EMPLN-RVMGDMILLPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINRFRILSPSLIPRLY 395 (526)
Q Consensus 318 ~~d~~~~~~~W~~~-~M~~~-R~~~~~vvLpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~Wt~~a~~~~~R~y 395 (526)
.+|+.. .+.... ..... ......+. .+++.++.++.+ + .+.+||+.+.+-...-.-....
T Consensus 265 lWd~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~l~s~s~d-~------------~i~~~~~~~~~~~~~~~gh~~~-- 326 (611)
T 1nr0_A 265 IWNVAT--LKVEKTIPVGTRIEDQQLGII-WTKQALVSISAN-G------------FINFVNPELGSIDQVRYGHNKA-- 326 (611)
T ss_dssp EEETTT--TEEEEEEECCSSGGGCEEEEE-ECSSCEEEEETT-C------------CEEEEETTTTEEEEEECCCSSC--
T ss_pred EEeCCC--CceeeeecCCCCccceeEEEE-EcCCEEEEEeCC-C------------cEEEEeCCCCCcceEEcCCCCC--
Confidence 676532 222221 21111 11112233 377777777654 1 4678998876532211000000
Q ss_pred cccceecCCCEEEEecCCCC
Q 043369 396 HSTAHLLSDGRVLVGGSNPN 415 (526)
Q Consensus 396 hs~a~LlpdG~V~v~GG~~~ 415 (526)
-.....-|||+.++.|+...
T Consensus 327 v~~l~~spdg~~l~s~s~D~ 346 (611)
T 1nr0_A 327 ITALSSSADGKTLFSADAEG 346 (611)
T ss_dssp EEEEEECTTSSEEEEEETTS
T ss_pred EEEEEEeCCCCEEEEEeCCC
Confidence 11233468999999998654
No 110
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=95.71 E-value=1.1 Score=42.67 Aligned_cols=133 Identities=14% Similarity=0.057 Sum_probs=67.9
Q ss_pred eEEEEeCCCCcEEeCccC--CccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEe
Q 043369 86 HAVEFDPITRKVRPLTIQ--TDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQIL 163 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~--~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L 163 (526)
.+.+||..+++....-.. +..........++|+.+++|+.+ ..+++||.. +.+-... ..-...+ ... .-
T Consensus 46 tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~D---g~v~iw~~~-~~~~~~~--~~~h~~~--~~~-~~ 116 (318)
T 4ggc_A 46 SVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS---AEVQLWDVQ-QQKRLRN--MTSHSAR--VGS-LS 116 (318)
T ss_dssp EEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT---SEEEEEETT-TTEEEEE--EECCSSC--EEE-EE
T ss_pred EEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECC---CcEEEeecC-CceeEEE--ecCccce--EEE-ee
Confidence 356677777765543221 22222334567799999999874 578999987 5443221 0111112 122 22
Q ss_pred cCCcEEEEcCccCCeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEccc--eEEEeccCC
Q 043369 164 PNGKIIVVGGRFQFTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDR--AILLDYVNN 240 (526)
Q Consensus 164 ~dG~v~viGG~~~~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~~--~~~yDp~t~ 240 (526)
.++++++.|+.+.. ...+ .... ... ...+.... .........++|+.++.|+.+ ..+||..++
T Consensus 117 ~~~~~l~s~~~~~~-~~~~~~~~~-----~~~-~~~~~~~~-------~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~ 182 (318)
T 4ggc_A 117 WNSYILSSGSRSGH-IHHHDVRVA-----EHH-VATLSGHS-------QEVCGLRWAPDGRHLASGGNDNLVNVWPSAPG 182 (318)
T ss_dssp EETTEEEEEETTSE-EEEEETTSS-----SCE-EEEEECCS-------SCEEEEEECTTSSEEEEEETTSCEEEEESSCB
T ss_pred cCCCEEEEEecCCc-eEeeecCCC-----cee-EEEEcCcc-------CceEEEEEcCCCCEEEEEecCcceeEEECCCC
Confidence 36788888776542 3333 2221 111 10011100 001123345688888888754 577888764
Q ss_pred e
Q 043369 241 R 241 (526)
Q Consensus 241 ~ 241 (526)
+
T Consensus 183 ~ 183 (318)
T 4ggc_A 183 E 183 (318)
T ss_dssp T
T ss_pred c
Confidence 3
No 111
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=95.65 E-value=1.2 Score=43.21 Aligned_cols=135 Identities=14% Similarity=0.158 Sum_probs=71.1
Q ss_pred eEEEEeCCCCcEEeCccCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEec-
Q 043369 86 HAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILP- 164 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~- 164 (526)
...+||..+++-...-..+..........+++.+++.|+.+ ..+++||.. ...-... .....+-.++...+
T Consensus 88 ~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D---~~i~vwd~~-~~~~~~~----~~h~~~v~~~~~~~~ 159 (319)
T 3frx_A 88 TLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRD---KTIKVWTIK-GQCLATL----LGHNDWVSQVRVVPN 159 (319)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETT---SCEEEEETT-SCEEEEE----CCCSSCEEEEEECCC
T ss_pred EEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCC---CeEEEEECC-CCeEEEE----eccCCcEEEEEEccC
Confidence 46789998876433222232222234456789999999874 578888876 3322221 11111112222232
Q ss_pred -----CCcEEEEcCccCCeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEccc--eEEEe
Q 043369 165 -----NGKIIVVGGRFQFTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDR--AILLD 236 (526)
Q Consensus 165 -----dG~v~viGG~~~~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~~--~~~yD 236 (526)
++..++.|+.++ .+.+| ..+. ... ..+.... .... .+...++|++++.|+.+ ..+||
T Consensus 160 ~~~~~~~~~l~s~~~d~-~i~~wd~~~~-----~~~-~~~~~h~-------~~v~-~~~~sp~g~~l~s~~~dg~i~iwd 224 (319)
T 3frx_A 160 EKADDDSVTIISAGNDK-MVKAWNLNQF-----QIE-ADFIGHN-------SNIN-TLTASPDGTLIASAGKDGEIMLWN 224 (319)
T ss_dssp ------CCEEEEEETTS-CEEEEETTTT-----EEE-EEECCCC-------SCEE-EEEECTTSSEEEEEETTCEEEEEE
T ss_pred CCCCCCccEEEEEeCCC-EEEEEECCcc-----hhh-eeecCCC-------CcEE-EEEEcCCCCEEEEEeCCCeEEEEE
Confidence 455677777654 46667 3322 111 0100000 0111 23446799999998864 67899
Q ss_pred ccCCeEE
Q 043369 237 YVNNRVM 243 (526)
Q Consensus 237 p~t~~w~ 243 (526)
..+.+-.
T Consensus 225 ~~~~~~~ 231 (319)
T 3frx_A 225 LAAKKAM 231 (319)
T ss_dssp TTTTEEE
T ss_pred CCCCcEE
Confidence 9887654
No 112
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=95.61 E-value=1.4 Score=43.30 Aligned_cols=63 Identities=11% Similarity=0.111 Sum_probs=39.4
Q ss_pred ceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCC-cccccceeEEecCCcEEEEcCccCCeEEEE
Q 043369 111 GALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLI-SPRWYASNQILPNGKIIVVGGRFQFTYEFI 182 (526)
Q Consensus 111 ~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~-~~R~y~s~~~L~dG~v~viGG~~~~~~E~y 182 (526)
....+++++++.|+.+ ..+++||.. +.+.... +. ....-.+++.-+||+.++.||.++ ++.+|
T Consensus 82 ~~~~~~~~~l~s~s~D---~~v~lwd~~-~~~~~~~----~~~h~~~v~~v~~sp~~~~l~s~~~d~-~i~~w 145 (343)
T 2xzm_R 82 LALSQENCFAISSSWD---KTLRLWDLR-TGTTYKR----FVGHQSEVYSVAFSPDNRQILSAGAER-EIKLW 145 (343)
T ss_dssp EEECSSTTEEEEEETT---SEEEEEETT-SSCEEEE----EECCCSCEEEEEECSSTTEEEEEETTS-CEEEE
T ss_pred EEECCCCCEEEEEcCC---CcEEEEECC-CCcEEEE----EcCCCCcEEEEEECCCCCEEEEEcCCC-EEEEE
Confidence 3456789999999874 589999987 5543221 11 111122445556899999888764 35555
No 113
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=95.61 E-value=1.3 Score=45.26 Aligned_cols=106 Identities=14% Similarity=0.019 Sum_probs=55.7
Q ss_pred CCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCC-cccccceeEEe-cCCcEEEEcCccCCeEEEE-cCCCCCCCcc
Q 043369 116 NGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLI-SPRWYASNQIL-PNGKIIVVGGRFQFTYEFI-PRTSDSDRKI 192 (526)
Q Consensus 116 ~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~-~~R~y~s~~~L-~dG~v~viGG~~~~~~E~y-P~~~~~~~~~ 192 (526)
++.++++|+.+ ..|.+||.. +.+-... ..+. ....=.+++-- .|++.++.|+.++ ++.+| ..++ .
T Consensus 131 ~~~~lasGs~d---g~i~lWd~~-~~~~~~~--~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~-~v~iwd~~~~-----~ 198 (435)
T 4e54_B 131 HPSTVAVGSKG---GDIMLWNFG-IKDKPTF--IKGIGAGGSITGLKFNPLNTNQFYASSMEG-TTRLQDFKGN-----I 198 (435)
T ss_dssp CTTCEEEEETT---SCEEEECSS-CCSCCEE--ECCCSSSCCCCEEEECSSCTTEEEEECSSS-CEEEEETTSC-----E
T ss_pred CCCEEEEEeCC---CEEEEEECC-CCCceeE--EEccCCCCCEEEEEEeCCCCCEEEEEeCCC-EEEEeeccCC-----c
Confidence 67889998863 368899986 5443322 1121 11111222222 2788888888774 46666 3332 1
Q ss_pred eeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEccc--eEEEeccCC
Q 043369 193 LYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDR--AILLDYVNN 240 (526)
Q Consensus 193 w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~~--~~~yDp~t~ 240 (526)
....... ... ......+...++|++++.|+.+ ..+||....
T Consensus 199 ~~~~~~~-~~~------~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~ 241 (435)
T 4e54_B 199 LRVFASS-DTI------NIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK 241 (435)
T ss_dssp EEEEECC-SSC------SCCCCCEEEETTTTEEEEECSSSBEEEEESSSC
T ss_pred eeEEecc-CCC------CccEEEEEECCCCCEEEEEeCCCcEeeeccCcc
Confidence 1111100 000 0011123345799999999864 567787654
No 114
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=95.60 E-value=0.58 Score=45.77 Aligned_cols=145 Identities=9% Similarity=0.045 Sum_probs=75.1
Q ss_pred eeEEecCCcEEEEcCccCCeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEcc--ceEEE
Q 043369 159 SNQILPNGKIIVVGGRFQFTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFAND--RAILL 235 (526)
Q Consensus 159 s~~~L~dG~v~viGG~~~~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~--~~~~y 235 (526)
+++.-+||+.+++|+.++ .+.+| ..+. .+.....+.... .... .+...++|++++.|+. ...+|
T Consensus 13 ~~~~s~~~~~l~~~~~d~-~v~i~~~~~~-----~~~~~~~~~~h~------~~v~-~~~~~~~~~~l~~~~~dg~i~vw 79 (372)
T 1k8k_C 13 CHAWNKDRTQIAICPNNH-EVHIYEKSGN-----KWVQVHELKEHN------GQVT-GVDWAPDSNRIVTCGTDRNAYVW 79 (372)
T ss_dssp EEEECTTSSEEEEECSSS-EEEEEEEETT-----EEEEEEEEECCS------SCEE-EEEEETTTTEEEEEETTSCEEEE
T ss_pred EEEECCCCCEEEEEeCCC-EEEEEeCCCC-----cEEeeeeecCCC------Cccc-EEEEeCCCCEEEEEcCCCeEEEE
Confidence 344456899999987654 56777 4443 322221111100 0111 2334568999988875 46789
Q ss_pred eccCCeEEEeccCCCCCCCCccCCCCceeecccccccccccccCCCCCccCcEEEEEcCCCCCCCchhhhhhcccccccc
Q 043369 236 DYVNNRVMKNYPVMPGGISRNYPSTGSSVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKS 315 (526)
Q Consensus 236 Dp~t~~w~~~~p~~p~~~~r~y~~~g~~v~lp~~~~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s 315 (526)
|..++++..... +... .+...-+... .+++.+++|+.+. .
T Consensus 80 d~~~~~~~~~~~-~~~~-------~~~v~~~~~~---------------~~~~~l~~~~~d~-----------------~ 119 (372)
T 1k8k_C 80 TLKGRTWKPTLV-ILRI-------NRAARCVRWA---------------PNEKKFAVGSGSR-----------------V 119 (372)
T ss_dssp EEETTEEEEEEE-CCCC-------SSCEEEEEEC---------------TTSSEEEEEETTS-----------------S
T ss_pred ECCCCeeeeeEE-eecC-------CCceeEEEEC---------------CCCCEEEEEeCCC-----------------E
Confidence 998887653221 1111 0111111111 2567777777541 3
Q ss_pred eEEEEeecCCCCcee-cc--cCccccccceEEeCCCcEEEEcCcC
Q 043369 316 CGRLTITAQNPKWEM-EE--MPLNRVMGDMILLPTGDVLIINGAA 357 (526)
Q Consensus 316 ~~~~d~~~~~~~W~~-~~--M~~~R~~~~~vvLpdG~V~vvGG~~ 357 (526)
+..+|+.. ...|.. .. .+....-.+....|+|+.+++|+.+
T Consensus 120 v~i~d~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 163 (372)
T 1k8k_C 120 ISICYFEQ-ENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD 163 (372)
T ss_dssp EEEEEEET-TTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETT
T ss_pred EEEEEecC-CCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCC
Confidence 45677764 233432 22 2222222333456899999998765
No 115
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=95.56 E-value=0.75 Score=44.73 Aligned_cols=90 Identities=16% Similarity=0.121 Sum_probs=48.2
Q ss_pred eEEEEeCCCCcEEeCccC--CccccccceEcC--CCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcc-ccccee
Q 043369 86 HAVEFDPITRKVRPLTIQ--TDTWCSSGALLA--NGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISP-RWYASN 160 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~--~~~fc~~~~~l~--~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~-R~y~s~ 160 (526)
...+||..+++...+..+ +...-......+ +|++++.|+.+ ..+++||.. +.+|... ..+... ..-.++
T Consensus 36 ~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D---~~v~iWd~~-~~~~~~~--~~~~~h~~~V~~v 109 (316)
T 3bg1_A 36 SVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYD---RKVIIWREE-NGTWEKS--HEHAGHDSSVNSV 109 (316)
T ss_dssp EEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETT---SCEEEECCS-SSCCCEE--EEECCCSSCCCEE
T ss_pred eEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECC---CEEEEEECC-CCcceEE--EEccCCCCceEEE
Confidence 356788776654322211 111111112222 48888888863 579999998 7767543 122211 111233
Q ss_pred EEecC--CcEEEEcCccCCeEEEE
Q 043369 161 QILPN--GKIIVVGGRFQFTYEFI 182 (526)
Q Consensus 161 ~~L~d--G~v~viGG~~~~~~E~y 182 (526)
+.-++ |++++.|+.++ ++.+|
T Consensus 110 ~~~p~~~g~~lasgs~D~-~i~lw 132 (316)
T 3bg1_A 110 CWAPHDYGLILACGSSDG-AISLL 132 (316)
T ss_dssp EECCTTTCSCEEEECSSS-CEEEE
T ss_pred EECCCCCCcEEEEEcCCC-CEEEE
Confidence 33345 78888888765 45566
No 116
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=95.54 E-value=1.5 Score=42.41 Aligned_cols=91 Identities=11% Similarity=-0.035 Sum_probs=51.9
Q ss_pred eEEEEeCCCCcEEeCccCCccccccceEcC-CCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCC-cccccceeEEe
Q 043369 86 HAVEFDPITRKVRPLTIQTDTWCSSGALLA-NGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLI-SPRWYASNQIL 163 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~-~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~-~~R~y~s~~~L 163 (526)
...+||..+++-...-..+..........+ ++.++++|+.. ..+.+||.. +.+-... -..+. ....-.+++..
T Consensus 96 ~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~d---g~i~iwd~~-~~~~~~~-~~~~~~~~~~v~~~~~~ 170 (366)
T 3k26_A 96 IIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKD---HALRLWNIQ-TDTLVAI-FGGVEGHRDEVLSADYD 170 (366)
T ss_dssp EEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETT---SCEEEEETT-TTEEEEE-ECSTTSCSSCEEEEEEC
T ss_pred EEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCC---CeEEEEEee-cCeEEEE-ecccccccCceeEEEEC
Confidence 467888887764332222332233344556 89999999863 468899987 5433221 01111 22222344445
Q ss_pred cCCcEEEEcCccCCeEEEE
Q 043369 164 PNGKIIVVGGRFQFTYEFI 182 (526)
Q Consensus 164 ~dG~v~viGG~~~~~~E~y 182 (526)
++|+.++.|+.++ .+.+|
T Consensus 171 ~~~~~l~~~~~dg-~i~i~ 188 (366)
T 3k26_A 171 LLGEKIMSCGMDH-SLKLW 188 (366)
T ss_dssp TTSSEEEEEETTS-CEEEE
T ss_pred CCCCEEEEecCCC-CEEEE
Confidence 6899999988764 45556
No 117
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=95.53 E-value=0.35 Score=47.90 Aligned_cols=67 Identities=10% Similarity=0.026 Sum_probs=37.2
Q ss_pred ceEcC-CCcEEEEcCCCCCccEEEEEcCCCCCCcccccC---------CCCC-cccccceeEEec-CCcEEEEcCccCCe
Q 043369 111 GALLA-NGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQ---------NGLI-SPRWYASNQILP-NGKIIVVGGRFQFT 178 (526)
Q Consensus 111 ~~~l~-~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~---------~~m~-~~R~y~s~~~L~-dG~v~viGG~~~~~ 178 (526)
....+ +|+++++|+.. ..+.+||.. +........ ..+. ....-.+++..+ ++++++.|+.++ .
T Consensus 49 ~~~s~~~~~~l~~~~~d---g~i~iw~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~-~ 123 (408)
T 4a11_B 49 LDIEPVEGRYMLSGGSD---GVIVLYDLE-NSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDK-T 123 (408)
T ss_dssp EEECTTTCCEEEEEETT---SCEEEEECC-CCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTS-E
T ss_pred EEEecCCCCEEEEEcCC---CeEEEEECC-CCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCC-e
Confidence 44566 89999999863 468889887 443322100 0000 111122334444 677888887654 5
Q ss_pred EEEE
Q 043369 179 YEFI 182 (526)
Q Consensus 179 ~E~y 182 (526)
+.+|
T Consensus 124 i~iw 127 (408)
T 4a11_B 124 LKVW 127 (408)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6667
No 118
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=95.51 E-value=1.1 Score=44.42 Aligned_cols=120 Identities=14% Similarity=0.016 Sum_probs=58.7
Q ss_pred eEcCC----C---cEEEEcCCCCCccEEEEEcCCCCCC------cccccCCCCCc---ccccceeEEe----cCCcE-EE
Q 043369 112 ALLAN----G---VLVQTGGYRLGERVVRYLKPCSDCD------WEEDHQNGLIS---PRWYASNQIL----PNGKI-IV 170 (526)
Q Consensus 112 ~~l~~----G---~l~v~GG~~~g~~~v~~ydp~~t~~------W~~~~~~~m~~---~R~y~s~~~L----~dG~v-~v 170 (526)
...++ | +++++|+.. ..+.+||.. +.+ +... ..... ...-.+++.. ++++. ++
T Consensus 69 ~~~~~~~~~g~~~~~l~s~~~d---g~i~iw~~~-~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~ 142 (397)
T 1sq9_A 69 DVLQAIERDAFELCLVATTSFS---GDLLFYRIT-REDETKKVIFEKL--DLLDSDMKKHSFWALKWGASNDRLLSHRLV 142 (397)
T ss_dssp EEEEEEETTTEEEEEEEEEETT---SCEEEEEEE-ECTTTCCEEEEEE--CCSCTTGGGSCEEEEEEECCC----CEEEE
T ss_pred EEecccccCCccccEEEEEcCC---CCEEEEEcc-CCcccccccceee--cccccccCCCcEEEEEEeeccCCCCceEEE
Confidence 34556 8 888988763 467888876 444 4444 11110 1222344455 68888 88
Q ss_pred EcCccCCeEEEE-cCC------CCCCCcceeecCCccc-----cCCCCCCCCCCcceEEEecCCcEEEEEccc--eEEEe
Q 043369 171 VGGRFQFTYEFI-PRT------SDSDRKILYQLPFLKE-----TMHSPKIPNNLYPFLHLSTDGNLFIFANDR--AILLD 236 (526)
Q Consensus 171 iGG~~~~~~E~y-P~~------~~~~~~~w~~~p~l~~-----~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~~--~~~yD 236 (526)
+|+.++ .+.+| ..+ ... -.|.....+.. ..+ ..... .+...++| +++.|+.+ ..+||
T Consensus 143 ~~~~dg-~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~----~~~i~-~~~~~~~~-~l~~~~~dg~i~i~d 213 (397)
T 1sq9_A 143 ATDVKG-TTYIWKFHPFADESNSLT--LNWSPTLELQGTVESPMTP----SQFAT-SVDISERG-LIATGFNNGTVQISE 213 (397)
T ss_dssp EEETTS-CEEEEEEESSSSHHHHTT--TCCCCEEEEEEEECCSSSS----CCCCC-EEEECTTS-EEEEECTTSEEEEEE
T ss_pred EEeCCC-cEEEEeCCccccccccce--eeccCcceeeeeeccccCC----CCCce-EEEECCCc-eEEEEeCCCcEEEEE
Confidence 888764 35555 332 110 01110000100 000 01111 23455688 77787753 67899
Q ss_pred ccCCeEEEec
Q 043369 237 YVNNRVMKNY 246 (526)
Q Consensus 237 p~t~~w~~~~ 246 (526)
..+.+....+
T Consensus 214 ~~~~~~~~~~ 223 (397)
T 1sq9_A 214 LSTLRPLYNF 223 (397)
T ss_dssp TTTTEEEEEE
T ss_pred CCCCceeEEE
Confidence 9887755433
No 119
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=95.37 E-value=0.74 Score=44.26 Aligned_cols=110 Identities=8% Similarity=0.026 Sum_probs=56.8
Q ss_pred eEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEe-c--CCcEEEEcCccCCeEEEE-cCCCC
Q 043369 112 ALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQIL-P--NGKIIVVGGRFQFTYEFI-PRTSD 187 (526)
Q Consensus 112 ~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L-~--dG~v~viGG~~~~~~E~y-P~~~~ 187 (526)
++-++|+.+++|+.+ ..+++||.. +.+.... ..+......-..+.. + +|++++.|+.++ ++.+| ..++
T Consensus 16 ~~s~~g~~las~s~D---~~v~iw~~~-~~~~~~~--~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~-~v~iWd~~~~- 87 (297)
T 2pm7_B 16 VMDYYGKRMATCSSD---KTIKIFEVE-GETHKLI--DTLTGHEGPVWRVDWAHPKFGTILASCSYDG-KVMIWKEENG- 87 (297)
T ss_dssp EECTTSSEEEEEETT---SCEEEEEBC-SSCBCCC--EEECCCSSCEEEEEECCGGGCSEEEEEETTT-EEEEEEBSSS-
T ss_pred EECCCCCEEEEEeCC---CEEEEEecC-CCCcEEE--EEEccccCCeEEEEecCCCcCCEEEEEcCCC-EEEEEEcCCC-
Confidence 345689999999874 578899876 4433222 122211111112222 2 388888888764 57777 5443
Q ss_pred CCCcceeecCCccccCCCCCCCCCCcceEEEecC--CcEEEEEccc--eEEEeccCC
Q 043369 188 SDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTD--GNLFIFANDR--AILLDYVNN 240 (526)
Q Consensus 188 ~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~d--G~Iy~~Gg~~--~~~yDp~t~ 240 (526)
.|..+..+... . .... .+...++ |++++.|+.+ ..+||..++
T Consensus 88 ----~~~~~~~~~~h-~-----~~v~-~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~ 133 (297)
T 2pm7_B 88 ----RWSQIAVHAVH-S-----ASVN-SVQWAPHEYGPMLLVASSDGKVSVVEFKEN 133 (297)
T ss_dssp ----CBCCCEEECCC-S-----SCEE-EEEECCGGGCSEEEEEETTSEEEEEEBCSS
T ss_pred ----ceEEEEEeecC-C-----Ccee-EEEeCcCCCCcEEEEEECCCcEEEEEecCC
Confidence 23211111100 0 0001 1222344 7888888754 567887764
No 120
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=95.23 E-value=2.7 Score=46.22 Aligned_cols=137 Identities=15% Similarity=0.101 Sum_probs=73.8
Q ss_pred eEEEEeCCCCcEEeCccCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCccccc-ceeEEec
Q 043369 86 HAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWY-ASNQILP 164 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y-~s~~~L~ 164 (526)
...+||..+++....-..+..........++|+.+++|+.. ..+.+||.. ++ |... ..+...... .+++.-+
T Consensus 78 ~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---g~i~vw~~~-~~-~~~~--~~~~~~~~~v~~~~~~p 150 (814)
T 3mkq_A 78 RIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDD---LTVKLWNWE-NN-WALE--QTFEGHEHFVMCVAFNP 150 (814)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETT---SEEEEEEGG-GT-SEEE--EEEECCSSCEEEEEEET
T ss_pred eEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCC---CEEEEEECC-CC-ceEE--EEEcCCCCcEEEEEEEc
Confidence 56789988877644322232222234566789888888763 478899976 43 3322 112211112 2333344
Q ss_pred -CCcEEEEcCccCCeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEec--CCcEEEEEccc--eEEEecc
Q 043369 165 -NGKIIVVGGRFQFTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLST--DGNLFIFANDR--AILLDYV 238 (526)
Q Consensus 165 -dG~v~viGG~~~~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~--dG~Iy~~Gg~~--~~~yDp~ 238 (526)
+|+.+++|+.++ .+.+| ..... .... +..-.. . .. ......+ +|+.++.|+.+ ..+||..
T Consensus 151 ~~~~~l~~~~~dg-~v~vwd~~~~~---~~~~-~~~~~~-~-------~v-~~~~~~~~~~~~~l~~~~~dg~i~~~d~~ 216 (814)
T 3mkq_A 151 KDPSTFASGCLDR-TVKVWSLGQST---PNFT-LTTGQE-R-------GV-NYVDYYPLPDKPYMITASDDLTIKIWDYQ 216 (814)
T ss_dssp TEEEEEEEEETTS-EEEEEETTCSS---CSEE-EECCCT-T-------CC-CEEEECCSTTCCEEEEECTTSEEEEEETT
T ss_pred CCCCEEEEEeCCC-eEEEEECCCCc---ceeE-EecCCC-C-------CE-EEEEEEECCCCCEEEEEeCCCEEEEEECC
Confidence 678888887664 56677 43331 0111 110000 0 01 1223344 88888888754 6789988
Q ss_pred CCeEE
Q 043369 239 NNRVM 243 (526)
Q Consensus 239 t~~w~ 243 (526)
+++..
T Consensus 217 ~~~~~ 221 (814)
T 3mkq_A 217 TKSCV 221 (814)
T ss_dssp TTEEE
T ss_pred CCcEE
Confidence 87754
No 121
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=95.19 E-value=2.7 Score=41.43 Aligned_cols=112 Identities=7% Similarity=-0.090 Sum_probs=61.5
Q ss_pred ceEcCCC-cEEEEcCCCCCccEEEEEcCCCCCCcccccCCCC-CcccccceeEEec-CCcEEEEcCccCCeEEEE-cCCC
Q 043369 111 GALLANG-VLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGL-ISPRWYASNQILP-NGKIIVVGGRFQFTYEFI-PRTS 186 (526)
Q Consensus 111 ~~~l~~G-~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m-~~~R~y~s~~~L~-dG~v~viGG~~~~~~E~y-P~~~ 186 (526)
....++| +++++|+.+ ..+++||.. +.+.... ... .....-.+++..+ +++.++.|+.++ .+.+| ....
T Consensus 79 ~~~~~~~~~~l~s~~~d---g~i~iwd~~-~~~~~~~--~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~-~i~iwd~~~~ 151 (383)
T 3ei3_B 79 LEWHPTHPTTVAVGSKG---GDIILWDYD-VQNKTSF--IQGMGPGDAITGMKFNQFNTNQLFVSSIRG-ATTLRDFSGS 151 (383)
T ss_dssp EEECSSCTTEEEEEEBT---SCEEEEETT-STTCEEE--ECCCSTTCBEEEEEEETTEEEEEEEEETTT-EEEEEETTSC
T ss_pred EEECCCCCCEEEEEcCC---CeEEEEeCC-Cccccee--eecCCcCCceeEEEeCCCCCCEEEEEeCCC-EEEEEECCCC
Confidence 3456778 899998863 478999987 6655443 122 1222223444455 568888887654 56667 3322
Q ss_pred CCCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEccc--eEEEeccCCe
Q 043369 187 DSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDR--AILLDYVNNR 241 (526)
Q Consensus 187 ~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~~--~~~yDp~t~~ 241 (526)
....+..... .. .... .+...++|+.++.|+.+ ..+||.....
T Consensus 152 -----~~~~~~~~~~-~~-----~~v~-~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 196 (383)
T 3ei3_B 152 -----VIQVFAKTDS-WD-----YWYC-CVDVSVSRQMLATGDSTGRLLLLGLDGHE 196 (383)
T ss_dssp -----EEEEEECCCC-SS-----CCEE-EEEEETTTTEEEEEETTSEEEEEETTSCE
T ss_pred -----ceEEEeccCC-CC-----CCeE-EEEECCCCCEEEEECCCCCEEEEECCCCE
Confidence 2222211100 00 0111 23445789999988854 5778885443
No 122
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=94.90 E-value=1.1 Score=44.67 Aligned_cols=132 Identities=11% Similarity=0.117 Sum_probs=63.3
Q ss_pred EEEEeCCCCcEEeCcc----CCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCccc-ccceeE
Q 043369 87 AVEFDPITRKVRPLTI----QTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPR-WYASNQ 161 (526)
Q Consensus 87 ~~~yDp~t~~w~~~~~----~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R-~y~s~~ 161 (526)
..+||..+++-..... .+.......+..+||+.+++|+.. ..+++||.. +.+-... +.... .-.+++
T Consensus 117 v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~d---g~v~iwd~~-~~~~~~~----~~~h~~~v~~v~ 188 (357)
T 4g56_B 117 VELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKD---FSVKVWDLS-QKAVLKS----YNAHSSEVNCVA 188 (357)
T ss_dssp EEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETT---SCEEEEETT-TTEEEEE----ECCCSSCEEEEE
T ss_pred EEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCC---CeEEEEECC-CCcEEEE----EcCCCCCEEEEE
Confidence 5678877665332211 122223334567899999999863 468999987 5443221 22111 112333
Q ss_pred EecCC-cEEEEcCccCCeEEEE-cCCCCCCCccee-ecCCccccCCCCCCCCCCcceE-EEecC-CcEEEEEccc--eEE
Q 043369 162 ILPNG-KIIVVGGRFQFTYEFI-PRTSDSDRKILY-QLPFLKETMHSPKIPNNLYPFL-HLSTD-GNLFIFANDR--AIL 234 (526)
Q Consensus 162 ~L~dG-~v~viGG~~~~~~E~y-P~~~~~~~~~w~-~~p~l~~~~~~~~~~~~~yp~~-~~~~d-G~Iy~~Gg~~--~~~ 234 (526)
.-+++ .+++.||.++ .+.+| ..+. +.. ...... ....... ...++ +++++.|+.+ ..+
T Consensus 189 ~s~~~~~~~~s~~~dg-~v~~wd~~~~-----~~~~~~~~~~---------~~~~v~~v~~sp~~~~~la~g~~d~~i~~ 253 (357)
T 4g56_B 189 ACPGKDTIFLSCGEDG-RILLWDTRKP-----KPATRIDFCA---------SDTIPTSVTWHPEKDDTFACGDETGNVSL 253 (357)
T ss_dssp ECTTCSSCEEEEETTS-CEEECCTTSS-----SCBCBCCCTT---------CCSCEEEEEECTTSTTEEEEEESSSCEEE
T ss_pred EccCCCceeeeeccCC-ceEEEECCCC-----ceeeeeeecc---------ccccccchhhhhcccceEEEeecccceeE
Confidence 33455 4677777654 46677 4433 111 111100 0111111 22344 6788888753 678
Q ss_pred EeccCCe
Q 043369 235 LDYVNNR 241 (526)
Q Consensus 235 yDp~t~~ 241 (526)
||..+.+
T Consensus 254 wd~~~~~ 260 (357)
T 4g56_B 254 VNIKNPD 260 (357)
T ss_dssp EESSCGG
T ss_pred EECCCCc
Confidence 8987755
No 123
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=94.84 E-value=1 Score=43.55 Aligned_cols=76 Identities=9% Similarity=0.077 Sum_probs=47.0
Q ss_pred ceeEEecCCcEEEEcCcc-CCeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEc--cceE
Q 043369 158 ASNQILPNGKIIVVGGRF-QFTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFAN--DRAI 233 (526)
Q Consensus 158 ~s~~~L~dG~v~viGG~~-~~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg--~~~~ 233 (526)
++.+.-+||++|+..|.. ...+.++ +.++. .-...+. +...++..+...+++||+..- ..+.
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~----v~~~i~l----------~~~~fgeGi~~~g~~lyv~t~~~~~v~ 89 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYGRSSVRQVALQTGK----VENIHKM----------DDSYFGEGLTLLNEKLYQVVWLKNIGF 89 (266)
T ss_dssp EEEEECSTTEEEEEECSTTTCEEEEEETTTCC----EEEEEEC----------CTTCCEEEEEEETTEEEEEETTCSEEE
T ss_pred ccEEEeCCCeEEEECCCCCCCEEEEEECCCCC----EEEEEec----------CCCcceEEEEEeCCEEEEEEecCCEEE
Confidence 455555569999998753 4567777 76651 1112221 112344555565779998863 4578
Q ss_pred EEeccCCeEEEecc
Q 043369 234 LLDYVNNRVMKNYP 247 (526)
Q Consensus 234 ~yDp~t~~w~~~~p 247 (526)
+||+.+.+....+|
T Consensus 90 viD~~t~~v~~~i~ 103 (266)
T 2iwa_A 90 IYDRRTLSNIKNFT 103 (266)
T ss_dssp EEETTTTEEEEEEE
T ss_pred EEECCCCcEEEEEE
Confidence 99999988665554
No 124
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=94.80 E-value=2.1 Score=42.30 Aligned_cols=139 Identities=13% Similarity=0.051 Sum_probs=69.2
Q ss_pred EEEEeCCCCc------EEeCccCC----ccccccceEc----CCCcE-EEEcCCCCCccEEEEEcCCCC------CC---
Q 043369 87 AVEFDPITRK------VRPLTIQT----DTWCSSGALL----ANGVL-VQTGGYRLGERVVRYLKPCSD------CD--- 142 (526)
Q Consensus 87 ~~~yDp~t~~------w~~~~~~~----~~fc~~~~~l----~~G~l-~v~GG~~~g~~~v~~ydp~~t------~~--- 142 (526)
..+||..+++ +..+.... .......... ++++. +++|+.. ..+.+||.. + .+
T Consensus 93 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d---g~i~iwd~~-~~~~~~~~~~~~ 168 (397)
T 1sq9_A 93 LLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK---GTTYIWKFH-PFADESNSLTLN 168 (397)
T ss_dssp EEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETT---SCEEEEEEE-SSSSHHHHTTTC
T ss_pred EEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCC---CcEEEEeCC-ccccccccceee
Confidence 5678877766 55554331 1222234455 78988 8888763 467778765 4 22
Q ss_pred cccccCCCCC--------cccccceeEEecCCcEEEEcCccCCeEEEE-cCCCCCCCccee-ecCCcccc--CCCCCCCC
Q 043369 143 WEEDHQNGLI--------SPRWYASNQILPNGKIIVVGGRFQFTYEFI-PRTSDSDRKILY-QLPFLKET--MHSPKIPN 210 (526)
Q Consensus 143 W~~~~~~~m~--------~~R~y~s~~~L~dG~v~viGG~~~~~~E~y-P~~~~~~~~~w~-~~p~l~~~--~~~~~~~~ 210 (526)
|... ..+. ....-.+++..++| .+++|+.++ .+.+| ..+. ... .+...... .. .
T Consensus 169 ~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg-~i~i~d~~~~-----~~~~~~~~~~~h~~~~-----~ 234 (397)
T 1sq9_A 169 WSPT--LELQGTVESPMTPSQFATSVDISERG-LIATGFNNG-TVQISELSTL-----RPLYNFESQHSMINNS-----N 234 (397)
T ss_dssp CCCE--EEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTS-EEEEEETTTT-----EEEEEEECCC---CCC-----C
T ss_pred ccCc--ceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCC-cEEEEECCCC-----ceeEEEeccccccccC-----C
Confidence 1111 0111 12222345556678 777777654 56677 4433 211 11110000 00 0
Q ss_pred CCcceEEEecCCcEEEEEccc-----eEEEeccCCeEEE
Q 043369 211 NLYPFLHLSTDGNLFIFANDR-----AILLDYVNNRVMK 244 (526)
Q Consensus 211 ~~yp~~~~~~dG~Iy~~Gg~~-----~~~yDp~t~~w~~ 244 (526)
... .+...++|++++.|+.+ ..+||..+.+-..
T Consensus 235 ~i~-~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~ 272 (397)
T 1sq9_A 235 SIR-SVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIG 272 (397)
T ss_dssp CEE-EEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEE
T ss_pred ccc-eEEECCCCCEEEEEecCCCCceEEEEECCCCcccc
Confidence 111 12345689998888754 5788988776443
No 125
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=94.77 E-value=3.1 Score=39.94 Aligned_cols=87 Identities=5% Similarity=-0.122 Sum_probs=47.7
Q ss_pred EEEEeCCCCc----EEeCccCCccccccceEcCCCc-EEEEcCCCCCccEEEEEcC-CCCCCcccccCCCCCccccccee
Q 043369 87 AVEFDPITRK----VRPLTIQTDTWCSSGALLANGV-LVQTGGYRLGERVVRYLKP-CSDCDWEEDHQNGLISPRWYASN 160 (526)
Q Consensus 87 ~~~yDp~t~~----w~~~~~~~~~fc~~~~~l~~G~-l~v~GG~~~g~~~v~~ydp-~~t~~W~~~~~~~m~~~R~y~s~ 160 (526)
..+||..+++ ...+. .+..........++|+ .+++|+.. ..+.+||. . +.+.... ........-.++
T Consensus 35 v~iw~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~d---g~i~~wd~~~-~~~~~~~--~~~~~~~~v~~l 107 (342)
T 1yfq_A 35 LTVYKFDIQAKNVDLLQSL-RYKHPLLCCNFIDNTDLQIYVGTVQ---GEILKVDLIG-SPSFQAL--TNNEANLGICRI 107 (342)
T ss_dssp EEEEEEETTTTEEEEEEEE-ECSSCEEEEEEEESSSEEEEEEETT---SCEEEECSSS-SSSEEEC--BSCCCCSCEEEE
T ss_pred EEEEEeCCCCccccceeee-ecCCceEEEEECCCCCcEEEEEcCC---CeEEEEEecc-CCceEec--cccCCCCceEEE
Confidence 5667776665 33222 1222222334566899 88888863 47899998 7 5544333 110012222234
Q ss_pred EEecCCcEEEEcCccCCeEEEE
Q 043369 161 QILPNGKIIVVGGRFQFTYEFI 182 (526)
Q Consensus 161 ~~L~dG~v~viGG~~~~~~E~y 182 (526)
+..+ ++.++.|+.++ .+.+|
T Consensus 108 ~~~~-~~~l~s~~~d~-~i~iw 127 (342)
T 1yfq_A 108 CKYG-DDKLIAASWDG-LIEVI 127 (342)
T ss_dssp EEET-TTEEEEEETTS-EEEEE
T ss_pred EeCC-CCEEEEEcCCC-eEEEE
Confidence 4445 78888887664 45666
No 126
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=94.70 E-value=3.4 Score=40.24 Aligned_cols=110 Identities=10% Similarity=0.053 Sum_probs=62.6
Q ss_pred eEcC--CCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEecCCcEEEEcCccCCeEEEE-cCCCCC
Q 043369 112 ALLA--NGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPNGKIIVVGGRFQFTYEFI-PRTSDS 188 (526)
Q Consensus 112 ~~l~--~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~dG~v~viGG~~~~~~E~y-P~~~~~ 188 (526)
...+ +|+.+++|+.+ ..+.+||.. +.+-... ..........+++.-+||++++.|+.++ .+.+| .++..
T Consensus 132 ~~~~~~~~~~l~s~s~d---g~i~~wd~~-~~~~~~~--~~~~~~~~i~~~~~~pdg~~lasg~~dg-~i~iwd~~~~~- 203 (343)
T 3lrv_A 132 YGHNEVNTEYFIWADNR---GTIGFQSYE-DDSQYIV--HSAKSDVEYSSGVLHKDSLLLALYSPDG-ILDVYNLSSPD- 203 (343)
T ss_dssp ECCC---CCEEEEEETT---CCEEEEESS-SSCEEEE--ECCCSSCCCCEEEECTTSCEEEEECTTS-CEEEEESSCTT-
T ss_pred EcCCCCCCCEEEEEeCC---CcEEEEECC-CCcEEEE--EecCCCCceEEEEECCCCCEEEEEcCCC-EEEEEECCCCC-
Confidence 3456 88999998863 478899987 5544322 1112222234566667999999998765 57777 54431
Q ss_pred CCcce-eecCCccccCCCCCCCCCCcceEEEecCCcEEEEEcc-ceEEEeccCCe
Q 043369 189 DRKIL-YQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFAND-RAILLDYVNNR 241 (526)
Q Consensus 189 ~~~~w-~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~-~~~~yDp~t~~ 241 (526)
.. ..+.. ... .... .+...++|+.++.|+. ...+||..+.+
T Consensus 204 ---~~~~~~~~---~h~-----~~v~-~l~fs~~g~~l~s~~~~~v~iwd~~~~~ 246 (343)
T 3lrv_A 204 ---QASSRFPV---DEE-----AKIK-EVKFADNGYWMVVECDQTVVCFDLRKDV 246 (343)
T ss_dssp ---SCCEECCC---CTT-----SCEE-EEEECTTSSEEEEEESSBEEEEETTSST
T ss_pred ---CCccEEec---cCC-----CCEE-EEEEeCCCCEEEEEeCCeEEEEEcCCCC
Confidence 11 11211 000 0111 1233568988888764 46788988754
No 127
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=94.68 E-value=1.7 Score=46.28 Aligned_cols=109 Identities=9% Similarity=-0.008 Sum_probs=65.1
Q ss_pred EcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEecCCcEEEEcCccCCeEEEE-c--CCCCCC
Q 043369 113 LLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPNGKIIVVGGRFQFTYEFI-P--RTSDSD 189 (526)
Q Consensus 113 ~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~dG~v~viGG~~~~~~E~y-P--~~~~~~ 189 (526)
+-++|++|+++.. ...+.++|.. +.+-... +....--++++.-+||+.+.+++.+ .++.+| . .+.
T Consensus 145 ~~p~~~~~vs~~~---d~~V~v~D~~-t~~~~~~----i~~g~~~~~v~~spdg~~l~v~~~d-~~V~v~D~~~~t~--- 212 (543)
T 1nir_A 145 LDLPNLFSVTLRD---AGQIALVDGD-SKKIVKV----IDTGYAVHISRMSASGRYLLVIGRD-ARIDMIDLWAKEP--- 212 (543)
T ss_dssp CCGGGEEEEEEGG---GTEEEEEETT-TCCEEEE----EECSTTEEEEEECTTSCEEEEEETT-SEEEEEETTSSSC---
T ss_pred cCCCCEEEEEEcC---CCeEEEEECC-CceEEEE----EecCcccceEEECCCCCEEEEECCC-CeEEEEECcCCCC---
Confidence 4568899988754 2578999987 6543321 2211113455566789877777766 677788 5 332
Q ss_pred Ccce-eecCCccccCCCCCCCCCCcceE-EEec----CCcEEEEEc---cceEEEeccCCeEEEecc
Q 043369 190 RKIL-YQLPFLKETMHSPKIPNNLYPFL-HLST----DGNLFIFAN---DRAILLDYVNNRVMKNYP 247 (526)
Q Consensus 190 ~~~w-~~~p~l~~~~~~~~~~~~~yp~~-~~~~----dG~Iy~~Gg---~~~~~yDp~t~~w~~~~p 247 (526)
+. ..++. ...|+. ...+ ||+.+++++ ....+||..+.+..+.++
T Consensus 213 --~~~~~i~~------------g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~ 265 (543)
T 1nir_A 213 --TKVAEIKI------------GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVS 265 (543)
T ss_dssp --EEEEEEEC------------CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEE
T ss_pred --cEEEEEec------------CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeec
Confidence 11 11221 112443 3456 898777776 356789999887654443
No 128
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=94.67 E-value=1.1 Score=44.64 Aligned_cols=137 Identities=9% Similarity=0.023 Sum_probs=68.9
Q ss_pred eEEEEeCCCCcEEeCccCCccccccceEcCCC-cEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEe-
Q 043369 86 HAVEFDPITRKVRPLTIQTDTWCSSGALLANG-VLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQIL- 163 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G-~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L- 163 (526)
...+||..+++....-..+.......++.+++ .+++.||.+ ..+++||.. +.+-... ............+..
T Consensus 162 ~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~d---g~v~~wd~~-~~~~~~~--~~~~~~~~~v~~v~~s 235 (357)
T 4g56_B 162 SVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGED---GRILLWDTR-KPKPATR--IDFCASDTIPTSVTWH 235 (357)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETT---SCEEECCTT-SSSCBCB--CCCTTCCSCEEEEEEC
T ss_pred eEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccC---CceEEEECC-CCceeee--eeeccccccccchhhh
Confidence 46789988876543322222222223344555 467777753 468999987 5543322 122222222233333
Q ss_pred cC-CcEEEEcCccCCeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCC-cEEEEEcc--ceEEEecc
Q 043369 164 PN-GKIIVVGGRFQFTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDG-NLFIFAND--RAILLDYV 238 (526)
Q Consensus 164 ~d-G~v~viGG~~~~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG-~Iy~~Gg~--~~~~yDp~ 238 (526)
++ +++++.|+.+. .+.+| .++.. .-..+.... .... .+...++| ++++.|+. ...+||..
T Consensus 236 p~~~~~la~g~~d~-~i~~wd~~~~~----~~~~~~~~~---------~~v~-~l~~sp~~~~~lasgs~D~~i~iwd~~ 300 (357)
T 4g56_B 236 PEKDDTFACGDETG-NVSLVNIKNPD----SAQTSAVHS---------QNIT-GLAYSYHSSPFLASISEDCTVAVLDAD 300 (357)
T ss_dssp TTSTTEEEEEESSS-CEEEEESSCGG----GCEEECCCS---------SCEE-EEEECSSSSCCEEEEETTSCEEEECTT
T ss_pred hcccceEEEeeccc-ceeEEECCCCc----EeEEEeccc---------eeEE-EEEEcCCCCCEEEEEeCCCEEEEEECC
Confidence 34 67888887654 46667 44321 111111100 0111 12233565 56666764 46789999
Q ss_pred CCeEE
Q 043369 239 NNRVM 243 (526)
Q Consensus 239 t~~w~ 243 (526)
+++..
T Consensus 301 ~~~~~ 305 (357)
T 4g56_B 301 FSEVF 305 (357)
T ss_dssp SCEEE
T ss_pred CCcEe
Confidence 88755
No 129
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=94.49 E-value=0.55 Score=45.76 Aligned_cols=112 Identities=10% Similarity=-0.028 Sum_probs=57.9
Q ss_pred EcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEe-c--CCcEEEEcCccCCeEEEE-cCCCCC
Q 043369 113 LLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQIL-P--NGKIIVVGGRFQFTYEFI-PRTSDS 188 (526)
Q Consensus 113 ~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L-~--dG~v~viGG~~~~~~E~y-P~~~~~ 188 (526)
+-++|+.+++|+.+ ..+++||.. +.+.... ..+......-..+.. + +|++++.|+.++ ++.+| ..++
T Consensus 21 ~s~~g~~lasgs~D---~~v~lwd~~-~~~~~~~--~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~-~v~iWd~~~~-- 91 (316)
T 3bg1_A 21 MDYYGTRLATCSSD---RSVKIFDVR-NGGQILI--ADLRGHEGPVWQVAWAHPMYGNILASCSYDR-KVIIWREENG-- 91 (316)
T ss_dssp ECGGGCEEEEEETT---TEEEEEEEE-TTEEEEE--EEEECCSSCEEEEEECCGGGSSCEEEEETTS-CEEEECCSSS--
T ss_pred EcCCCCEEEEEeCC---CeEEEEEec-CCCcEEE--EEEcCCCccEEEEEeCCCCCCCEEEEEECCC-EEEEEECCCC--
Confidence 34688999999863 578999976 5432211 112211111122233 2 478888888764 56777 5443
Q ss_pred CCcceeecCCccccCCCCCCCCCCcceEEEecC--CcEEEEEccc--eEEEeccCC-eEE
Q 043369 189 DRKILYQLPFLKETMHSPKIPNNLYPFLHLSTD--GNLFIFANDR--AILLDYVNN-RVM 243 (526)
Q Consensus 189 ~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~d--G~Iy~~Gg~~--~~~yDp~t~-~w~ 243 (526)
.|.....+.... .... .+...++ |++++.|+.+ ..+||..++ .|.
T Consensus 92 ---~~~~~~~~~~h~------~~V~-~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~ 141 (316)
T 3bg1_A 92 ---TWEKSHEHAGHD------SSVN-SVCWAPHDYGLILACGSSDGAISLLTYTGEGQWE 141 (316)
T ss_dssp ---CCCEEEEECCCS------SCCC-EEEECCTTTCSCEEEECSSSCEEEEEECSSSCEE
T ss_pred ---cceEEEEccCCC------CceE-EEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcc
Confidence 232111111100 0111 1223455 7888888754 577888765 453
No 130
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=94.46 E-value=3.9 Score=44.46 Aligned_cols=138 Identities=13% Similarity=0.131 Sum_probs=73.1
Q ss_pred eEEEEeCCCCcEEeCccCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCC-CcccccCCCCCcccccceeEEec
Q 043369 86 HAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDC-DWEEDHQNGLISPRWYASNQILP 164 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~-~W~~~~~~~m~~~R~y~s~~~L~ 164 (526)
...+||..+++-...-..|..........++|+.+++|+.+ ..+++||.. .. .+... ........+-.+++..+
T Consensus 453 ~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D---~~i~iwd~~-~~~~~~~~-~~~~~h~~~v~~~~~~~ 527 (694)
T 3dm0_A 453 ELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRD---RTIKLWNTL-GECKYTIS-EGGEGHRDWVSCVRFSP 527 (694)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETT---SCEEEECTT-SCEEEEEC-SSTTSCSSCEEEEEECS
T ss_pred cEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCC---CEEEEEECC-CCcceeec-cCCCCCCCcEEEEEEeC
Confidence 56789988775433222232222234456789999998863 578899975 32 22221 00111222223333344
Q ss_pred CC--cEEEEcCccCCeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEccc--eEEEeccC
Q 043369 165 NG--KIIVVGGRFQFTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDR--AILLDYVN 239 (526)
Q Consensus 165 dG--~v~viGG~~~~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~~--~~~yDp~t 239 (526)
++ ..++.|+.++ ++.+| ..+.. ....+. ... ... -.+...+||++++.|+.+ ..+||..+
T Consensus 528 ~~~~~~l~s~s~d~-~v~vwd~~~~~----~~~~~~---~h~------~~v-~~v~~spdg~~l~sg~~Dg~i~iwd~~~ 592 (694)
T 3dm0_A 528 NTLQPTIVSASWDK-TVKVWNLSNCK----LRSTLA---GHT------GYV-STVAVSPDGSLCASGGKDGVVLLWDLAE 592 (694)
T ss_dssp CSSSCEEEEEETTS-CEEEEETTTCC----EEEEEC---CCS------SCE-EEEEECTTSSEEEEEETTSBCEEEETTT
T ss_pred CCCcceEEEEeCCC-eEEEEECCCCc----EEEEEc---CCC------CCE-EEEEEeCCCCEEEEEeCCCeEEEEECCC
Confidence 54 4666666554 57777 43321 111111 100 001 123456799999998854 67899988
Q ss_pred CeEE
Q 043369 240 NRVM 243 (526)
Q Consensus 240 ~~w~ 243 (526)
++-.
T Consensus 593 ~~~~ 596 (694)
T 3dm0_A 593 GKKL 596 (694)
T ss_dssp TEEE
T ss_pred CceE
Confidence 8754
No 131
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=94.44 E-value=3.8 Score=39.58 Aligned_cols=69 Identities=7% Similarity=0.018 Sum_probs=44.6
Q ss_pred ecCCcEEEEcCccCCeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEc--cceEEEeccC
Q 043369 163 LPNGKIIVVGGRFQFTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFAN--DRAILLDYVN 239 (526)
Q Consensus 163 L~dG~v~viGG~~~~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg--~~~~~yDp~t 239 (526)
+.++++|+..|..+. +..+ ++++. .-... +.. ..|.......+++||+... ....+||+++
T Consensus 62 ~~~~~Ly~stG~~g~-v~~iD~~Tgk----v~~~~--l~~---------~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~T 125 (268)
T 3nok_A 62 FHQGHFFESTGHQGT-LRQLSLESAQ----PVWME--RLG---------NIFAEGLASDGERLYQLTWTEGLLFTWSGMP 125 (268)
T ss_dssp EETTEEEEEETTTTE-EEECCSSCSS----CSEEE--ECT---------TCCEEEEEECSSCEEEEESSSCEEEEEETTT
T ss_pred EECCEEEEEcCCCCE-EEEEECCCCc----EEeEE--CCC---------CcceeEEEEeCCEEEEEEccCCEEEEEECCc
Confidence 447899999997654 6667 76652 11122 211 2344445566789999873 4578999999
Q ss_pred CeEEEecc
Q 043369 240 NRVMKNYP 247 (526)
Q Consensus 240 ~~w~~~~p 247 (526)
.+....++
T Consensus 126 l~~~~ti~ 133 (268)
T 3nok_A 126 PQRERTTR 133 (268)
T ss_dssp TEEEEEEE
T ss_pred CcEEEEEe
Confidence 88765564
No 132
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=94.37 E-value=3.6 Score=39.64 Aligned_cols=75 Identities=9% Similarity=0.014 Sum_probs=47.1
Q ss_pred ceeEEecCCcEEEEcCccC-CeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEc--cceE
Q 043369 158 ASNQILPNGKIIVVGGRFQ-FTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFAN--DRAI 233 (526)
Q Consensus 158 ~s~~~L~dG~v~viGG~~~-~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg--~~~~ 233 (526)
++.. +.||++|+..|..+ ..+..+ ++++. .-...++. ...|.......+++||+... +.+.
T Consensus 46 qGL~-~~~~~LyestG~~g~S~v~~vD~~Tgk----v~~~~~l~----------~~~FgeGit~~g~~ly~ltw~~~~v~ 110 (262)
T 3nol_A 46 EGFF-YRNGYFYESTGLNGRSSIRKVDIESGK----TLQQIELG----------KRYFGEGISDWKDKIVGLTWKNGLGF 110 (262)
T ss_dssp EEEE-EETTEEEEEEEETTEEEEEEECTTTCC----EEEEEECC----------TTCCEEEEEEETTEEEEEESSSSEEE
T ss_pred ceEE-EECCEEEEECCCCCCceEEEEECCCCc----EEEEEecC----------CccceeEEEEeCCEEEEEEeeCCEEE
Confidence 3444 44899999999764 356777 77651 11222221 12344445556889999873 4578
Q ss_pred EEeccCCeEEEecc
Q 043369 234 LLDYVNNRVMKNYP 247 (526)
Q Consensus 234 ~yDp~t~~w~~~~p 247 (526)
+||+++.+....++
T Consensus 111 v~D~~t~~~~~ti~ 124 (262)
T 3nol_A 111 VWNIRNLRQVRSFN 124 (262)
T ss_dssp EEETTTCCEEEEEE
T ss_pred EEECccCcEEEEEE
Confidence 99999988665554
No 133
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=94.30 E-value=0.76 Score=44.36 Aligned_cols=105 Identities=11% Similarity=-0.020 Sum_probs=55.6
Q ss_pred eEcCCCcEEEEcCCCCCccEEEEEcCCCCCC----cccccCCCCCcccccceeEEecCCc-EEEEcCccCCeEEEE-c-C
Q 043369 112 ALLANGVLVQTGGYRLGERVVRYLKPCSDCD----WEEDHQNGLISPRWYASNQILPNGK-IIVVGGRFQFTYEFI-P-R 184 (526)
Q Consensus 112 ~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~----W~~~~~~~m~~~R~y~s~~~L~dG~-v~viGG~~~~~~E~y-P-~ 184 (526)
...++|+++++|+.. ..+.+||.. +.. .... ......-.+++..++|+ .++.|+.++ .+.+| . .
T Consensus 18 ~~s~~~~~l~~~~~d---~~v~iw~~~-~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~l~~~~~dg-~i~~wd~~~ 88 (342)
T 1yfq_A 18 KIIPSKSLLLITSWD---GSLTVYKFD-IQAKNVDLLQS----LRYKHPLLCCNFIDNTDLQIYVGTVQG-EILKVDLIG 88 (342)
T ss_dssp EEEGGGTEEEEEETT---SEEEEEEEE-TTTTEEEEEEE----EECSSCEEEEEEEESSSEEEEEEETTS-CEEEECSSS
T ss_pred EEcCCCCEEEEEcCC---CeEEEEEeC-CCCccccceee----eecCCceEEEEECCCCCcEEEEEcCCC-eEEEEEecc
Confidence 445678888888753 478888876 443 2111 11222223455566899 888888664 46677 4 4
Q ss_pred CCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEccc--eEEEeccC
Q 043369 185 TSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDR--AILLDYVN 239 (526)
Q Consensus 185 ~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~~--~~~yDp~t 239 (526)
+. ....+.... .. .... .+...+ +++++.|+.+ ..+||..+
T Consensus 89 ~~-----~~~~~~~~~--~~-----~~v~-~l~~~~-~~~l~s~~~d~~i~iwd~~~ 131 (342)
T 1yfq_A 89 SP-----SFQALTNNE--AN-----LGIC-RICKYG-DDKLIAASWDGLIEVIDPRN 131 (342)
T ss_dssp SS-----SEEECBSCC--CC-----SCEE-EEEEET-TTEEEEEETTSEEEEECHHH
T ss_pred CC-----ceEeccccC--CC-----CceE-EEEeCC-CCEEEEEcCCCeEEEEcccc
Confidence 33 222221100 00 0111 122344 7777777754 56788765
No 134
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=94.17 E-value=3.8 Score=39.67 Aligned_cols=63 Identities=16% Similarity=0.204 Sum_probs=39.3
Q ss_pred ceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCc-ccccceeEEecCCcEEEEcCccCCeEEEE
Q 043369 111 GALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLIS-PRWYASNQILPNGKIIVVGGRFQFTYEFI 182 (526)
Q Consensus 111 ~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~-~R~y~s~~~L~dG~v~viGG~~~~~~E~y 182 (526)
....+||+.++.|+.+ ..+++||.. +.+-.. .+.. ...-.+++.-++++.++.|+.++ ++.+|
T Consensus 71 ~~~s~dg~~l~s~s~D---~~v~~wd~~-~~~~~~----~~~~h~~~v~~~~~~~~~~~l~s~s~D~-~i~vw 134 (319)
T 3frx_A 71 CTLTADGAYALSASWD---KTLRLWDVA-TGETYQ----RFVGHKSDVMSVDIDKKASMIISGSRDK-TIKVW 134 (319)
T ss_dssp EEECTTSSEEEEEETT---SEEEEEETT-TTEEEE----EEECCSSCEEEEEECTTSCEEEEEETTS-CEEEE
T ss_pred EEECCCCCEEEEEeCC---CEEEEEECC-CCCeeE----EEccCCCcEEEEEEcCCCCEEEEEeCCC-eEEEE
Confidence 4456799999999874 589999987 543211 1111 11112344456888888888764 46666
No 135
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=94.15 E-value=1.8 Score=43.00 Aligned_cols=137 Identities=10% Similarity=0.050 Sum_probs=68.8
Q ss_pred eEEEEeCCCCcEEeCccCCccccccceEcCCC-cEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccc-eeEEe
Q 043369 86 HAVEFDPITRKVRPLTIQTDTWCSSGALLANG-VLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYA-SNQIL 163 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G-~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~-s~~~L 163 (526)
...+||..+++-...-..+...-....+.+++ .+++.|+.+ ..+++||.. +.+-... -......... +++..
T Consensus 150 ~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D---~~v~iwd~~-~~~~~~~--~~~~~~~~~~~~~~~~ 223 (344)
T 4gqb_B 150 CIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSED---NRILLWDTR-CPKPASQ--IGCSAPGYLPTSLAWH 223 (344)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETT---SCEEEEETT-SSSCEEE--CC----CCCEEEEEEC
T ss_pred eEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccc---ccccccccc-ccceeee--eecceeeccceeeeec
Confidence 46789988876543222222211223344566 588888763 578999987 5543321 1111111112 23333
Q ss_pred c-CCcEEEEcCccCCeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCC-cEEEEEcc--ceEEEecc
Q 043369 164 P-NGKIIVVGGRFQFTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDG-NLFIFAND--RAILLDYV 238 (526)
Q Consensus 164 ~-dG~v~viGG~~~~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG-~Iy~~Gg~--~~~~yDp~ 238 (526)
+ ++++++.|+.++ .+.+| .++.. .-..+. ... ...+ .+...+|| ++++.|+. ...+||..
T Consensus 224 p~~~~~l~sg~~dg-~v~~wd~~~~~----~~~~~~---~h~------~~v~-~v~fsp~g~~~lasgs~D~~i~vwd~~ 288 (344)
T 4gqb_B 224 PQQSEVFVFGDENG-TVSLVDTKSTS----CVLSSA---VHS------QCVT-GLVFSPHSVPFLASLSEDCSLAVLDSS 288 (344)
T ss_dssp SSCTTEEEEEETTS-EEEEEESCC------CCEEEE---CCS------SCEE-EEEECSSSSCCEEEEETTSCEEEECTT
T ss_pred CCCCcceEEeccCC-cEEEEECCCCc----EEEEEc---CCC------CCEE-EEEEccCCCeEEEEEeCCCeEEEEECC
Confidence 3 577888887654 57777 44431 111111 100 0111 12234676 56667764 46789998
Q ss_pred CCeEE
Q 043369 239 NNRVM 243 (526)
Q Consensus 239 t~~w~ 243 (526)
+++-.
T Consensus 289 ~~~~~ 293 (344)
T 4gqb_B 289 LSELF 293 (344)
T ss_dssp CCEEE
T ss_pred CCcEE
Confidence 87744
No 136
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=94.06 E-value=2.2 Score=43.63 Aligned_cols=74 Identities=19% Similarity=0.159 Sum_probs=40.7
Q ss_pred ccceEEeCCCcEEEEcCcCCCCCCccCCCCCccccEEE-eCCCCcEeecCCCCccccccccceecCCCEEEEecCCCCCC
Q 043369 339 MGDMILLPTGDVLIINGAAKGTAGWGAAREPVLNPVIY-CPKINRFRILSPSLIPRLYHSTAHLLSDGRVLVGGSNPNVN 417 (526)
Q Consensus 339 ~~~~vvLpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~Y-DP~t~~Wt~~a~~~~~R~yhs~a~LlpdG~V~v~GG~~~~~ 417 (526)
.|..++.-||+||..|-...|.-|.+... ....+..- -|...+...++ .-.+|+. +|..||+||.-|-+.++.
T Consensus 287 ~hs~alt~~G~v~~wG~n~~GqLG~g~~~-~~~~p~~v~~~~~~~v~~va----~G~~hs~-alt~~G~v~~wG~n~~Gq 360 (406)
T 4d9s_A 287 RHTMALTSDGKLYGWGWNKFGQVGVGNNL-DQCSPVQVRFPDDQKVVQVS----CGWRHTL-AVTERNNVFAWGRGTNGQ 360 (406)
T ss_dssp SEEEEEETTSCEEEEECCTTSTTCSSSSS-CEEEEEEECCGGGCCEEEEE----ECSSEEE-EEETTSCEEEEECCTTST
T ss_pred CEEEEEcCCCeEEEeeCCCCCCCCCCCCC-CCccCEEEeccCCCcEEEEE----eCCCeEE-EEeCCCCEEEecCCCCCc
Confidence 45666777999999996554433322111 11112211 12222333332 2245765 456899999999987765
Q ss_pred C
Q 043369 418 Y 418 (526)
Q Consensus 418 ~ 418 (526)
.
T Consensus 361 L 361 (406)
T 4d9s_A 361 L 361 (406)
T ss_dssp T
T ss_pred c
Confidence 3
No 137
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=93.93 E-value=4.6 Score=38.55 Aligned_cols=134 Identities=16% Similarity=0.068 Sum_probs=65.5
Q ss_pred EEEEeCCCCcEEeCccCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEe-c-
Q 043369 87 AVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQIL-P- 164 (526)
Q Consensus 87 ~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L-~- 164 (526)
..+||.......................+++..++.|+.+ ..+.+||.. ...-... .............+ .
T Consensus 110 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d---~~~~~~d~~-~~~~~~~---~~~~~~~~v~~~~~~~~ 182 (340)
T 4aow_A 110 LRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD---KTIKLWNTL-GVCKYTV---QDESHSEWVSCVRFSPN 182 (340)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETT---SCEEEECTT-SCEEEEE---CSSSCSSCEEEEEECSC
T ss_pred ceEEeecccceeeeecCCCCceeEEEEeecCccceeecCC---CeEEEEEeC-CCceEEE---EeccccCcccceEEccC
Confidence 4556666655444333322222233455678888888763 467788875 3211111 11111111111212 2
Q ss_pred -CCcEEEEcCccCCeEEEE-cCCCCCCCccee-ecCCccccCCCCCCCCCCcceEEEecCCcEEEEEccc--eEEEeccC
Q 043369 165 -NGKIIVVGGRFQFTYEFI-PRTSDSDRKILY-QLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDR--AILLDYVN 239 (526)
Q Consensus 165 -dG~v~viGG~~~~~~E~y-P~~~~~~~~~w~-~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~~--~~~yDp~t 239 (526)
.+.+++.|+.+. .+.+| ..+. ... .+.. .. .... .+...+||++++.|+.+ ..+||..+
T Consensus 183 ~~~~~~~s~~~d~-~i~i~d~~~~-----~~~~~~~~--h~-------~~v~-~~~~s~~~~~l~s~s~Dg~i~iwd~~~ 246 (340)
T 4aow_A 183 SSNPIIVSCGWDK-LVKVWNLANC-----KLKTNHIG--HT-------GYLN-TVTVSPDGSLCASGGKDGQAMLWDLNE 246 (340)
T ss_dssp SSSCEEEEEETTS-CEEEEETTTT-----EEEEEECC--CS-------SCEE-EEEECTTSSEEEEEETTCEEEEEETTT
T ss_pred CCCcEEEEEcCCC-EEEEEECCCC-----ceeeEecC--CC-------CcEE-EEEECCCCCEEEEEeCCCeEEEEEecc
Confidence 245666666553 46666 4432 111 1111 00 0111 12345799999998864 57789888
Q ss_pred CeEE
Q 043369 240 NRVM 243 (526)
Q Consensus 240 ~~w~ 243 (526)
.+-.
T Consensus 247 ~~~~ 250 (340)
T 4aow_A 247 GKHL 250 (340)
T ss_dssp TEEE
T ss_pred Ccee
Confidence 7644
No 138
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=93.91 E-value=2.6 Score=39.71 Aligned_cols=59 Identities=12% Similarity=0.063 Sum_probs=36.8
Q ss_pred CCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCC-cccccceeEEecCCcEEEEcCccCCeEEEE
Q 043369 115 ANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLI-SPRWYASNQILPNGKIIVVGGRFQFTYEFI 182 (526)
Q Consensus 115 ~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~-~~R~y~s~~~L~dG~v~viGG~~~~~~E~y 182 (526)
+++..+++|+.+ ..+++||.. +..-... +. ....-.+++.-++|+.+++|+.++. +.+|
T Consensus 27 ~~~~~l~s~~~d---g~v~vw~~~-~~~~~~~----~~~~~~~v~~~~~~~~~~~l~~~~~dg~-i~~~ 86 (313)
T 3odt_A 27 VDDSKVASVSRD---GTVRLWSKD-DQWLGTV----VYTGQGFLNSVCYDSEKELLLFGGKDTM-INGV 86 (313)
T ss_dssp EETTEEEEEETT---SEEEEEEES-SSEEEEE----EEECSSCEEEEEEETTTTEEEEEETTSC-EEEE
T ss_pred cCCCEEEEEEcC---CcEEEEECC-CCEEEEE----eecCCccEEEEEECCCCCEEEEecCCCe-EEEE
Confidence 788888988863 478899876 4432221 11 1222334556678999999987653 4444
No 139
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=93.91 E-value=1.3 Score=42.90 Aligned_cols=114 Identities=8% Similarity=0.053 Sum_probs=55.8
Q ss_pred eEcCCC-cEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEecC---CcEEEEcCccCCeEEEE-cCCC
Q 043369 112 ALLANG-VLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPN---GKIIVVGGRFQFTYEFI-PRTS 186 (526)
Q Consensus 112 ~~l~~G-~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~d---G~v~viGG~~~~~~E~y-P~~~ 186 (526)
...++| +++++|+...+...+.+||.. +.+.... ........-.+++..++ |+.++.|+.++ .+.+| ..+.
T Consensus 25 ~~~p~~~~l~~~~s~~~~d~~v~iw~~~-~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg-~i~iwd~~~~ 100 (357)
T 3i2n_A 25 KWVPCSAKFVTMGNFARGTGVIQLYEIQ-HGDLKLL--REIEKAKPIKCGTFGATSLQQRYLATGDFGG-NLHIWNLEAP 100 (357)
T ss_dssp EECTTSSEEEEEEC--CCCEEEEEEEEC-SSSEEEE--EEEEESSCEEEEECTTCCTTTCCEEEEETTS-CEEEECTTSC
T ss_pred EEcCCCceEEEecCccCCCcEEEEEeCC-CCcccce--eeecccCcEEEEEEcCCCCCCceEEEecCCC-eEEEEeCCCC
Confidence 344566 566677652223678999987 6554332 11122222223333444 68888888664 46667 4332
Q ss_pred CCCCcceeecCCccccCCCCCCCCCCcceE-----EEecCCcEEEEEccc--eEEEeccCCe
Q 043369 187 DSDRKILYQLPFLKETMHSPKIPNNLYPFL-----HLSTDGNLFIFANDR--AILLDYVNNR 241 (526)
Q Consensus 187 ~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~-----~~~~dG~Iy~~Gg~~--~~~yDp~t~~ 241 (526)
.. ....+..-. ....... ...++|+.++.|+.+ ..+||..+++
T Consensus 101 ~~---~~~~~~~~~---------~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~ 150 (357)
T 3i2n_A 101 EM---PVYSVKGHK---------EIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKD 150 (357)
T ss_dssp SS---CSEEECCCS---------SCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCS
T ss_pred Cc---cEEEEEecc---------cceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCC
Confidence 10 111111000 0001011 123688888888754 6788888754
No 140
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=93.87 E-value=3.6 Score=40.68 Aligned_cols=134 Identities=10% Similarity=0.110 Sum_probs=69.7
Q ss_pred eEEEEeCCCCcEEeCc----cCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCc-cccccee
Q 043369 86 HAVEFDPITRKVRPLT----IQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLIS-PRWYASN 160 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~----~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~-~R~y~s~ 160 (526)
...+||..+++-.... ..|.......++.+||+.++.|+.+ ..+++||.. +.+-.. .+.. ...-.++
T Consensus 104 ~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d---~~i~iwd~~-~~~~~~----~~~~h~~~V~~~ 175 (344)
T 4gqb_B 104 AVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKD---ICIKVWDLA-QQVVLS----SYRAHAAQVTCV 175 (344)
T ss_dssp EEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETT---SCEEEEETT-TTEEEE----EECCCSSCEEEE
T ss_pred EEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCC---CeEEEEECC-CCcEEE----EEcCcCCceEEE
Confidence 4678998877532211 1233333334567899999999874 478999987 543221 1221 1111233
Q ss_pred EEecCC-cEEEEcCccCCeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcce-EEEec-CCcEEEEEccc--eEE
Q 043369 161 QILPNG-KIIVVGGRFQFTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPF-LHLST-DGNLFIFANDR--AIL 234 (526)
Q Consensus 161 ~~L~dG-~v~viGG~~~~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~-~~~~~-dG~Iy~~Gg~~--~~~ 234 (526)
+.-+++ .+++.|+.++ ++.+| ..+.. .-..+... . + ..... +...+ ++++++.|+.+ ..+
T Consensus 176 ~~~~~~~~~l~s~s~D~-~v~iwd~~~~~----~~~~~~~~-~--~------~~~~~~~~~~p~~~~~l~sg~~dg~v~~ 241 (344)
T 4gqb_B 176 AASPHKDSVFLSCSEDN-RILLWDTRCPK----PASQIGCS-A--P------GYLPTSLAWHPQQSEVFVFGDENGTVSL 241 (344)
T ss_dssp EECSSCTTEEEEEETTS-CEEEEETTSSS----CEEECC-------------CCCEEEEEECSSCTTEEEEEETTSEEEE
T ss_pred EecCCCCCceeeecccc-ccccccccccc----eeeeeecc-e--e------eccceeeeecCCCCcceEEeccCCcEEE
Confidence 334566 5778777664 56677 44431 11111110 0 0 00111 12233 67888888754 678
Q ss_pred EeccCCe
Q 043369 235 LDYVNNR 241 (526)
Q Consensus 235 yDp~t~~ 241 (526)
||..+++
T Consensus 242 wd~~~~~ 248 (344)
T 4gqb_B 242 VDTKSTS 248 (344)
T ss_dssp EESCC--
T ss_pred EECCCCc
Confidence 9988765
No 141
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=93.74 E-value=9.3 Score=41.47 Aligned_cols=112 Identities=10% Similarity=-0.039 Sum_probs=64.9
Q ss_pred eeEEEEecCCeEEEEecccCCCCCccCCCCccccCccccCCCCcceEEEEeCCCCcEEeCccCCc---------------
Q 043369 41 AMHMALLPNDRIIAFDRSHFGPSNITLPQGKCIKGVELETSDCYAHAVEFDPITRKVRPLTIQTD--------------- 105 (526)
Q Consensus 41 ~~~~a~l~~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~yDp~t~~w~~~~~~~~--------------- 105 (526)
..+.+.-|||+.+++.+...+.. ......+||..+++.+.+...+.
T Consensus 39 ~~~~~~SpdG~~la~~~~~d~~~-------------------~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (741)
T 2ecf_A 39 LMKPKVAPDGSRVTFLRGKDSDR-------------------NQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKAR 99 (741)
T ss_dssp CEEEEECTTSSEEEEEECCSSCT-------------------TEEEEEEEETTTCCEEEEECGGGTC-------------
T ss_pred CCCceEecCCCEEEEEeccCCCC-------------------cccEEEEEECCCCceeEccchhhcccccccccchhhhh
Confidence 34566678999887766521100 01356788998888766543211
Q ss_pred ---------cccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCC---CcccccCCCCCcccccceeEEecCCcEEEEcC
Q 043369 106 ---------TWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDC---DWEEDHQNGLISPRWYASNQILPNGKIIVVGG 173 (526)
Q Consensus 106 ---------~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~---~W~~~~~~~m~~~R~y~s~~~L~dG~v~viGG 173 (526)
......+.-+||+.++++.. ..+.++|.. +. .-..+ .. ....-...+--+||+.++.+.
T Consensus 100 ~~~~~~~~~~~v~~~~~SpDg~~l~~~~~----~~i~~~d~~-~~~~~~~~~l--~~--~~~~~~~~~~SPDG~~la~~~ 170 (741)
T 2ecf_A 100 RERQRIAAMTGIVDYQWSPDAQRLLFPLG----GELYLYDLK-QEGKAAVRQL--TH--GEGFATDAKLSPKGGFVSFIR 170 (741)
T ss_dssp -------CCEESCCCEECTTSSEEEEEET----TEEEEEESS-SCSTTSCCBC--CC--SSSCEEEEEECTTSSEEEEEE
T ss_pred hhhhhhccccCcceeEECCCCCEEEEEeC----CcEEEEECC-CCCcceEEEc--cc--CCcccccccCCCCCCEEEEEe
Confidence 11234567789998888764 579999987 65 43333 11 112223344556898766654
Q ss_pred ccCCeEEEE
Q 043369 174 RFQFTYEFI 182 (526)
Q Consensus 174 ~~~~~~E~y 182 (526)
. ..+.+|
T Consensus 171 ~--~~i~~~ 177 (741)
T 2ecf_A 171 G--RNLWVI 177 (741)
T ss_dssp T--TEEEEE
T ss_pred C--CcEEEE
Confidence 3 245555
No 142
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=93.72 E-value=5.5 Score=38.77 Aligned_cols=240 Identities=13% Similarity=0.133 Sum_probs=116.6
Q ss_pred ceEcCCCcEEEEcCCCC---------------------CccEEEEEcCCCCCCccccc-CCCCCcccccceeEEecCCcE
Q 043369 111 GALLANGVLVQTGGYRL---------------------GERVVRYLKPCSDCDWEEDH-QNGLISPRWYASNQILPNGKI 168 (526)
Q Consensus 111 ~~~l~~G~l~v~GG~~~---------------------g~~~v~~ydp~~t~~W~~~~-~~~m~~~R~y~s~~~L~dG~v 168 (526)
.++-++|++|+.+.... ....+.++|+. +.+....- ...+..++ +++.-++|++
T Consensus 29 va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~-~g~~~~~~~~~~~~~p~---gia~d~~g~l 104 (329)
T 3fvz_A 29 VALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPN-NAEILQSSGKNLFYLPH---GLSIDTDGNY 104 (329)
T ss_dssp EEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTT-TCCEEEEECTTTCSSEE---EEEECTTSCE
T ss_pred EEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECC-CCeEEeccCCCccCCce---EEEECCCCCE
Confidence 44556888888765421 01268899997 55543220 01222222 3555568999
Q ss_pred EEEcCccCCeEEEE-cCCCCCCCcce-eecC-CccccCCCCCCCCCCcceEE-Eec-CCcEEEEEc---cceEEEeccCC
Q 043369 169 IVVGGRFQFTYEFI-PRTSDSDRKIL-YQLP-FLKETMHSPKIPNNLYPFLH-LST-DGNLFIFAN---DRAILLDYVNN 240 (526)
Q Consensus 169 ~viGG~~~~~~E~y-P~~~~~~~~~w-~~~p-~l~~~~~~~~~~~~~yp~~~-~~~-dG~Iy~~Gg---~~~~~yDp~t~ 240 (526)
||....+ ..+..| +.... .. ..+. ....-.. ...-.+|... +-+ +|+||+... ....+||+...
T Consensus 105 ~v~d~~~-~~v~~~~~~g~~----~~~~~~~~~~~~g~~---~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~ 176 (329)
T 3fvz_A 105 WVTDVAL-HQVFKLDPHSKE----GPLLILGRSMQPGSD---QNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGK 176 (329)
T ss_dssp EEEETTT-TEEEEECTTCSS----CCSEEESBTTBCCCS---TTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSC
T ss_pred EEEECCC-CEEEEEeCCCCe----EEEEEecccCCCCCC---ccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCC
Confidence 9886543 346666 43220 01 1111 0000000 0011245544 445 799999874 34678886544
Q ss_pred eEEEeccCCCCC-----CCCccCCCCceeecccccccccccccCCCCCccCcEEEEEcCCCCCCCchhhhhhcccccccc
Q 043369 241 RVMKNYPVMPGG-----ISRNYPSTGSSVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKS 315 (526)
Q Consensus 241 ~w~~~~p~~p~~-----~~r~y~~~g~~v~lp~~~~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s 315 (526)
. ...+...... ....+| .+.++ . ...++||++...+ ..
T Consensus 177 ~-~~~~~~~g~~~~~~~~~~~~p-~gia~----d--------------~~~g~l~v~d~~~-----------------~~ 219 (329)
T 3fvz_A 177 F-VTQWGEESSGSSPRPGQFSVP-HSLAL----V--------------PHLDQLCVADREN-----------------GR 219 (329)
T ss_dssp E-EEEECEECCSSSCCTTEESCE-EEEEE----E--------------TTTTEEEEEETTT-----------------TE
T ss_pred E-EEEeccCCCCCCCCCcccCCC-cEEEE----E--------------CCCCEEEEEECCC-----------------CE
Confidence 3 3223211000 001112 12221 1 1248999987543 24
Q ss_pred eEEEEeecCCCCceec-ccC-c-cccccceEEeCCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCcEeec-C----
Q 043369 316 CGRLTITAQNPKWEME-EMP-L-NRVMGDMILLPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINRFRIL-S---- 387 (526)
Q Consensus 316 ~~~~d~~~~~~~W~~~-~M~-~-~R~~~~~vvLpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~Wt~~-a---- 387 (526)
+.+||+. +.+.... ..+ . .+.. ....-| |.+|+..|... .+ +....++.+||+.+.+.... .
T Consensus 220 I~~~~~~--~G~~~~~~~~~~~~~~~~-~~~~~p-g~~~~~~g~~~-v~-----~~~~~~v~~~~~~~g~~~~~~~~~~~ 289 (329)
T 3fvz_A 220 IQCFKTD--TKEFVREIKHASFGRNVF-AISYIP-GFLFAVNGKPY-FG-----DQEPVQGFVMNFSSGEIIDVFKPVRK 289 (329)
T ss_dssp EEEEETT--TCCEEEEECCTTTTTCEE-EEEEET-TEEEEEECCCC-TT-----CSCCCCEEEEETTTCCEEEEECCSSS
T ss_pred EEEEECC--CCcEEEEEeccccCCCcc-eeeecC-CEEEEeCCCEE-ec-----cCCCcEEEEEEcCCCeEEEEEcCCCC
Confidence 5678764 2333321 111 1 1222 223344 77888777531 11 11223678999888865443 2
Q ss_pred CCCccccccccceecCCCEEEEecCC
Q 043369 388 PSLIPRLYHSTAHLLSDGRVLVGGSN 413 (526)
Q Consensus 388 ~~~~~R~yhs~a~LlpdG~V~v~GG~ 413 (526)
....| ++ ..+-+||.|||+...
T Consensus 290 ~~~~p---~~-ia~~~dG~lyvad~~ 311 (329)
T 3fvz_A 290 HFDMP---HD-IVASEDGTVYIGDAH 311 (329)
T ss_dssp CCSSE---EE-EEECTTSEEEEEESS
T ss_pred ccCCe---eE-EEECCCCCEEEEECC
Confidence 22222 23 345799999998764
No 143
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=93.71 E-value=4 Score=42.81 Aligned_cols=67 Identities=4% Similarity=-0.141 Sum_probs=41.8
Q ss_pred cccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCC----CcccccCCCCCccc-c-cceeEEec--CCcEEEEcCccCC
Q 043369 106 TWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDC----DWEEDHQNGLISPR-W-YASNQILP--NGKIIVVGGRFQF 177 (526)
Q Consensus 106 ~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~----~W~~~~~~~m~~~R-~-y~s~~~L~--dG~v~viGG~~~~ 177 (526)
......+.-+||+.+++|+. ..+.+||.. +. +-.. .+.... . -.+++.-+ ||+.++.|+.++
T Consensus 19 ~~v~~~~~spdg~~l~~~~~----~~v~v~~~~-~~~~~~~~~~----~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg- 88 (615)
T 1pgu_A 19 NFTTHLSYDPTTNAIAYPCG----KSAFVRCLD-DGDSKVPPVV----QFTGHGSSVVTTVKFSPIKGSQYLCSGDESG- 88 (615)
T ss_dssp TCCCCCEEETTTTEEEEEET----TEEEEEECC-SSCCSSCSEE----EECTTTTSCEEEEEECSSTTCCEEEEEETTS-
T ss_pred CceeEEEECCCCCEEEEecC----CeEEEEECC-CCCCccccce----EEecCCCceEEEEEECcCCCCCEEEEecCCC-
Confidence 33444567789999999873 479999987 54 2211 122222 2 23455667 899999988764
Q ss_pred eEEEE
Q 043369 178 TYEFI 182 (526)
Q Consensus 178 ~~E~y 182 (526)
.+.+|
T Consensus 89 ~v~vw 93 (615)
T 1pgu_A 89 KVIVW 93 (615)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 46666
No 144
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=93.71 E-value=4.6 Score=40.82 Aligned_cols=133 Identities=14% Similarity=0.018 Sum_probs=69.1
Q ss_pred eEEEEeCCCCcEEeCccCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEecC
Q 043369 86 HAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPN 165 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~d 165 (526)
...+||..+++....-..+.. .-..+..++..+++|+.+ ..+.+||.. +..-... ...+......-..... +
T Consensus 194 ~i~vwd~~~~~~~~~~~~h~~--~v~~l~~~~~~l~s~s~d---g~i~vwd~~-~~~~~~~-~~~~~~~~~~v~~~~~-~ 265 (435)
T 1p22_A 194 TVRVWDVNTGEMLNTLIHHCE--AVLHLRFNNGMMVTCSKD---RSIAVWDMA-SPTDITL-RRVLVGHRAAVNVVDF-D 265 (435)
T ss_dssp CEEEEESSSCCEEEEECCCCS--CEEEEECCTTEEEEEETT---SCEEEEECS-SSSCCEE-EEEECCCSSCEEEEEE-E
T ss_pred eEEEEECCCCcEEEEEcCCCC--cEEEEEEcCCEEEEeeCC---CcEEEEeCC-CCCCcee-eeEecCCCCcEEEEEe-C
Confidence 567899888765432222211 111222356678888763 478899987 4432211 0011111212233334 7
Q ss_pred CcEEEEcCccCCeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEccc--eEEEeccCCeE
Q 043369 166 GKIIVVGGRFQFTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDR--AILLDYVNNRV 242 (526)
Q Consensus 166 G~v~viGG~~~~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~~--~~~yDp~t~~w 242 (526)
|+.+++|+.++ .+.+| ..+.. .-..+. .. ..+...+..++++++.|+.+ ..+||..+++-
T Consensus 266 ~~~l~s~~~dg-~i~vwd~~~~~----~~~~~~---~~---------~~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~~~ 328 (435)
T 1p22_A 266 DKYIVSASGDR-TIKVWNTSTCE----FVRTLN---GH---------KRGIACLQYRDRLVVSGSSDNTIRLWDIECGAC 328 (435)
T ss_dssp TTEEEEEETTS-EEEEEETTTCC----EEEEEE---CC---------SSCEEEEEEETTEEEEEETTSCEEEEETTTCCE
T ss_pred CCEEEEEeCCC-eEEEEECCcCc----EEEEEc---CC---------CCcEEEEEeCCCEEEEEeCCCeEEEEECCCCCE
Confidence 88888887654 56677 44431 111111 10 01223344578888888754 67899988765
Q ss_pred E
Q 043369 243 M 243 (526)
Q Consensus 243 ~ 243 (526)
.
T Consensus 329 ~ 329 (435)
T 1p22_A 329 L 329 (435)
T ss_dssp E
T ss_pred E
Confidence 4
No 145
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=93.70 E-value=5.2 Score=38.47 Aligned_cols=112 Identities=10% Similarity=-0.053 Sum_probs=60.5
Q ss_pred ceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEecCCcEEEEcCcc---CCeEEEE-cCCC
Q 043369 111 GALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPNGKIIVVGGRF---QFTYEFI-PRTS 186 (526)
Q Consensus 111 ~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~dG~v~viGG~~---~~~~E~y-P~~~ 186 (526)
.+..++|+|++++... ..+.+||+. +.+.... ... ....-.+.+.-+||++|+....+ ...+-+| +.+.
T Consensus 50 ~~~~~~g~l~~~~~~~---~~i~~~d~~-~~~~~~~--~~~-~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~ 122 (333)
T 2dg1_A 50 LNFDRQGQLFLLDVFE---GNIFKINPE-TKEIKRP--FVS-HKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGD 122 (333)
T ss_dssp EEECTTSCEEEEETTT---CEEEEECTT-TCCEEEE--EEC-SSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSC
T ss_pred cEECCCCCEEEEECCC---CEEEEEeCC-CCcEEEE--eeC-CCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCC
Confidence 3455789999887542 478999998 7766543 111 11111234444689998876433 1245556 5443
Q ss_pred CCCCccee-ecCCccccCCCCCCCCCCcce-EEEecCCcEEEEEcc--------ceEEEeccCCeEE
Q 043369 187 DSDRKILY-QLPFLKETMHSPKIPNNLYPF-LHLSTDGNLFIFAND--------RAILLDYVNNRVM 243 (526)
Q Consensus 187 ~~~~~~w~-~~p~l~~~~~~~~~~~~~yp~-~~~~~dG~Iy~~Gg~--------~~~~yDp~t~~w~ 243 (526)
... .+..... ...+. ...-++|++|+.... ...+||+.+++..
T Consensus 123 -----~~~~~~~~~~~---------~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~ 175 (333)
T 2dg1_A 123 -----NLQDIIEDLST---------AYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVT 175 (333)
T ss_dssp -----SCEEEECSSSS---------CCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEE
T ss_pred -----EEEEEEccCcc---------CCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEE
Confidence 211 1110000 11222 344568999986542 3567777766544
No 146
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=93.67 E-value=5.8 Score=38.91 Aligned_cols=237 Identities=11% Similarity=0.082 Sum_probs=112.3
Q ss_pred CcEEeCccCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCccc-ccceeEEecCCcEEEEcC
Q 043369 95 RKVRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPR-WYASNQILPNGKIIVVGG 173 (526)
Q Consensus 95 ~~w~~~~~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R-~y~s~~~L~dG~v~viGG 173 (526)
.+|+++............+..++.++++|-. + .+..-+-. ..+|+.. ......+. .+.++.. .++++|++|-
T Consensus 25 ~~W~~~~~~~~~~~~~v~~~~~~~~~~~G~~--g--~i~~s~Dg-G~tW~~~-~~~~~~~~~~~~~i~~-~~~~~~~~g~ 97 (327)
T 2xbg_A 25 NPWEAIQLPTTATILDMSFIDRHHGWLVGVN--A--TLMETRDG-GQTWEPR-TLVLDHSDYRFNSVSF-QGNEGWIVGE 97 (327)
T ss_dssp CCEEEEECSCSSCEEEEEESSSSCEEEEETT--T--EEEEESST-TSSCEEC-CCCCSCCCCEEEEEEE-ETTEEEEEEE
T ss_pred CCceEeecCCCCcEEEEEECCCCcEEEEcCC--C--eEEEeCCC-CCCCeEC-CCCCCCCCccEEEEEe-cCCeEEEEEC
Confidence 4677665332221112233446788887642 2 23322223 5689886 11222222 2334443 4678888752
Q ss_pred ccCCeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEccceEEEec--cCCeEEEeccCCC
Q 043369 174 RFQFTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDRAILLDY--VNNRVMKNYPVMP 250 (526)
Q Consensus 174 ~~~~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~~~~~yDp--~t~~w~~~~p~~p 250 (526)
.+ .+| ...+. .+|........ . +...+. +....++++|+.+... .+|-. ...+|.+ ... +
T Consensus 98 -~g---~i~~S~DgG---~tW~~~~~~~~-~-----~~~~~~-i~~~~~~~~~~~~~~g-~v~~S~DgG~tW~~-~~~-~ 160 (327)
T 2xbg_A 98 -PP---IMLHTTDGG---QSWSQIPLDPK-L-----PGSPRL-IKALGNGSAEMITNVG-AIYRTKDSGKNWQA-LVQ-E 160 (327)
T ss_dssp -TT---EEEEESSTT---SSCEECCCCTT-C-----SSCEEE-EEEEETTEEEEEETTC-CEEEESSTTSSEEE-EEC-S
T ss_pred -CC---eEEEECCCC---CCceECccccC-C-----CCCeEE-EEEECCCCEEEEeCCc-cEEEEcCCCCCCEE-eec-C
Confidence 22 244 33211 36775532111 0 012222 2334578999887543 23322 2357874 322 2
Q ss_pred CCCCCccCCCCceeecccccccccccccCCCCCccCcEEEEEcCCCCCCCchhhhhhcccccccceEEEEeecC-CCCce
Q 043369 251 GGISRNYPSTGSSVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTITAQ-NPKWE 329 (526)
Q Consensus 251 ~~~~r~y~~~g~~v~lp~~~~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~-~~~W~ 329 (526)
.. ... .+ .... .+++++++|-.. . .|.-.+. ...|+
T Consensus 161 ~~--~~~--~~-~~~~------------------~~~~~~~~g~~G--~------------------~~~S~d~gG~tW~ 197 (327)
T 2xbg_A 161 AI--GVM--RN-LNRS------------------PSGEYVAVSSRG--S------------------FYSTWEPGQTAWE 197 (327)
T ss_dssp CC--CCE--EE-EEEC------------------TTSCEEEEETTS--S------------------EEEEECTTCSSCE
T ss_pred CC--cce--EE-EEEc------------------CCCcEEEEECCC--c------------------EEEEeCCCCCcee
Confidence 11 111 01 1111 256777766321 1 1222222 46798
Q ss_pred ecccCccccccceEEeCCCcEEEEcCcCCCCCCccCCCCCccccEEEeCC-CCcEeecCCC--CccccccccceecCCCE
Q 043369 330 MEEMPLNRVMGDMILLPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPK-INRFRILSPS--LIPRLYHSTAHLLSDGR 406 (526)
Q Consensus 330 ~~~M~~~R~~~~~vvLpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~-t~~Wt~~a~~--~~~R~yhs~a~LlpdG~ 406 (526)
....+..+.....+..++|++|+++.. | .+.+.+.+ -.+|+.+..- +.....++.+ ..++++
T Consensus 198 ~~~~~~~~~~~~~~~~~~g~~~~~~~~--G------------~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~-~~~~~~ 262 (327)
T 2xbg_A 198 PHNRTTSRRLHNMGFTPDGRLWMIVNG--G------------KIAFSDPDNSENWGELLSPLRRNSVGFLDLA-YRTPNE 262 (327)
T ss_dssp EEECCSSSCEEEEEECTTSCEEEEETT--T------------EEEEEETTEEEEECCCBCTTSSCCSCEEEEE-ESSSSC
T ss_pred ECCCCCCCccceeEECCCCCEEEEeCC--c------------eEEEecCCCCCeeEeccCCcccCCcceEEEE-ecCCCE
Confidence 764444455556566789999987642 1 12233222 3479876532 2222233332 346899
Q ss_pred EEEecCC
Q 043369 407 VLVGGSN 413 (526)
Q Consensus 407 V~v~GG~ 413 (526)
+|++|++
T Consensus 263 ~~~~g~~ 269 (327)
T 2xbg_A 263 VWLAGGA 269 (327)
T ss_dssp EEEEEST
T ss_pred EEEEeCC
Confidence 9998874
No 147
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=93.57 E-value=5 Score=37.89 Aligned_cols=60 Identities=15% Similarity=0.229 Sum_probs=34.7
Q ss_pred CCcEEEEcCCCCCccEEEEEcCCCCC-------CcccccCCCCCccc-ccceeEEecC--CcEEEEcCccCCeEEEE
Q 043369 116 NGVLVQTGGYRLGERVVRYLKPCSDC-------DWEEDHQNGLISPR-WYASNQILPN--GKIIVVGGRFQFTYEFI 182 (526)
Q Consensus 116 ~G~l~v~GG~~~g~~~v~~ydp~~t~-------~W~~~~~~~m~~~R-~y~s~~~L~d--G~v~viGG~~~~~~E~y 182 (526)
|++++++|+.+ ..+++||.. +. .|... ..+.... .-.+++..++ ++.++.|+.++ .+.+|
T Consensus 70 d~~~l~s~~~d---g~v~vwd~~-~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg-~v~iw 139 (351)
T 3f3f_A 70 YGRIIASASYD---KTVKLWEED-PDQEECSGRRWNKL--CTLNDSKGSLYSVKFAPAHLGLKLACLGNDG-ILRLY 139 (351)
T ss_dssp GCSEEEEEETT---SCEEEEEEC-TTSCTTSSCSEEEE--EEECCCSSCEEEEEECCGGGCSEEEEEETTC-EEEEE
T ss_pred CCCEEEEEcCC---CeEEEEecC-CCcccccccCccee--eeecccCCceeEEEEcCCCCCcEEEEecCCC-cEEEe
Confidence 58999999873 467888876 33 12222 1122111 1223445556 88888888664 46666
No 148
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=93.48 E-value=5.4 Score=37.94 Aligned_cols=75 Identities=11% Similarity=0.071 Sum_probs=48.2
Q ss_pred ceeEEecCCcEEEEcCccC-CeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEc--cceE
Q 043369 158 ASNQILPNGKIIVVGGRFQ-FTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFAN--DRAI 233 (526)
Q Consensus 158 ~s~~~L~dG~v~viGG~~~-~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg--~~~~ 233 (526)
++.+ +.++++|+..|..+ ..+..+ +.++. .-...++ +...+.......+++||+... +...
T Consensus 24 qGL~-~~~~~LyestG~~g~S~v~~vD~~tgk----v~~~~~l----------~~~~fgeGi~~~~~~ly~ltw~~~~v~ 88 (243)
T 3mbr_X 24 EGLF-YLRGHLYESTGETGRSSVRKVDLETGR----ILQRAEV----------PPPYFGAGIVAWRDRLIQLTWRNHEGF 88 (243)
T ss_dssp EEEE-EETTEEEEEECCTTSCEEEEEETTTCC----EEEEEEC----------CTTCCEEEEEEETTEEEEEESSSSEEE
T ss_pred ccEE-EECCEEEEECCCCCCceEEEEECCCCC----EEEEEeC----------CCCcceeEEEEeCCEEEEEEeeCCEEE
Confidence 4454 44799999999764 457777 77651 1112222 123345555666899999874 4578
Q ss_pred EEeccCCeEEEecc
Q 043369 234 LLDYVNNRVMKNYP 247 (526)
Q Consensus 234 ~yDp~t~~w~~~~p 247 (526)
+||+++-+....++
T Consensus 89 v~D~~tl~~~~ti~ 102 (243)
T 3mbr_X 89 VYDLATLTPRARFR 102 (243)
T ss_dssp EEETTTTEEEEEEE
T ss_pred EEECCcCcEEEEEe
Confidence 99999988665554
No 149
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=93.40 E-value=5.3 Score=39.61 Aligned_cols=138 Identities=8% Similarity=0.026 Sum_probs=73.1
Q ss_pred eEEEEeCCCCcEEeCccCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCccc-ccceeEEec
Q 043369 86 HAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPR-WYASNQILP 164 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R-~y~s~~~L~ 164 (526)
...+||+.+.+...... +.......+.-+||++++.|+. ..+.+++.. +...... ....... .-.+++-.+
T Consensus 158 ~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~----~~~~~~~~~-~~~~~~~--~~~~~~~~~v~~v~fsp 229 (365)
T 4h5i_A 158 IMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITG----SSLEVISTV-TGSCIAR--KTDFDKNWSLSKINFIA 229 (365)
T ss_dssp EEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECS----SCEEEEETT-TCCEEEE--ECCCCTTEEEEEEEEEE
T ss_pred EEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEeccc----eeEEEEEec-cCcceee--eecCCCCCCEEEEEEcC
Confidence 46789998876543221 2222223456689999999874 345666655 4433221 1111111 123455567
Q ss_pred CCcEEEEcCccCC---eEEEE-cCCCCCCCcceeec--CCccccCCCCCCCCCCcceEEEecCCcEEEEEccc--eEEEe
Q 043369 165 NGKIIVVGGRFQF---TYEFI-PRTSDSDRKILYQL--PFLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDR--AILLD 236 (526)
Q Consensus 165 dG~v~viGG~~~~---~~E~y-P~~~~~~~~~w~~~--p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~~--~~~yD 236 (526)
||+.++.++.+.. .+..| .... ..... ..+.... ...+ .+...+||++++.|+.+ ..+||
T Consensus 230 dg~~l~~~s~d~~~~~~i~~~~~~~~-----~~~~~~~~~~~~~~------~~V~-~~~~Spdg~~lasgs~D~~V~iwd 297 (365)
T 4h5i_A 230 DDTVLIAASLKKGKGIVLTKISIKSG-----NTSVLRSKQVTNRF------KGIT-SMDVDMKGELAVLASNDNSIALVK 297 (365)
T ss_dssp TTEEEEEEEESSSCCEEEEEEEEETT-----EEEEEEEEEEESSC------SCEE-EEEECTTSCEEEEEETTSCEEEEE
T ss_pred CCCEEEEEecCCcceeEEeecccccc-----eecceeeeeecCCC------CCeE-eEEECCCCCceEEEcCCCEEEEEE
Confidence 9999999876642 22233 2111 11111 0011100 0111 12346799999999864 68899
Q ss_pred ccCCeEE
Q 043369 237 YVNNRVM 243 (526)
Q Consensus 237 p~t~~w~ 243 (526)
..+.+-.
T Consensus 298 ~~~~~~~ 304 (365)
T 4h5i_A 298 LKDLSMS 304 (365)
T ss_dssp TTTTEEE
T ss_pred CCCCcEE
Confidence 9988754
No 150
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=93.33 E-value=5.6 Score=37.68 Aligned_cols=64 Identities=11% Similarity=-0.067 Sum_probs=36.8
Q ss_pred EcCCCcEEEE-------cCCCCCccEEEEEcCCCCCCcccccCCC--C-CcccccceeEEecC-CcEEEEcCccCCeEEE
Q 043369 113 LLANGVLVQT-------GGYRLGERVVRYLKPCSDCDWEEDHQNG--L-ISPRWYASNQILPN-GKIIVVGGRFQFTYEF 181 (526)
Q Consensus 113 ~l~~G~l~v~-------GG~~~g~~~v~~ydp~~t~~W~~~~~~~--m-~~~R~y~s~~~L~d-G~v~viGG~~~~~~E~ 181 (526)
...+|++|++ +.. ...+.+||+. +.++... .. . .....-.+.+.-+| |++|+....+ .+.+
T Consensus 25 ~~~~g~l~~~~~~~~~~~~~---~~~i~~~d~~-~g~~~~~--~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~--~l~~ 96 (314)
T 1pjx_A 25 FDKNGDFYIVAPEVEVNGKP---AGEILRIDLK-TGKKTVI--CKPEVNGYGGIPAGCQCDRDANQLFVADMRL--GLLV 96 (314)
T ss_dssp ECTTSCEEEEETTCEETTEE---CCEEEEECTT-TCCEEEE--ECCEETTEECCEEEEEECSSSSEEEEEETTT--EEEE
T ss_pred ECCCCCEEEEEeccccCCCC---CCEEEEEeCC-CCcEEEE--EecccCCCCCCCceEEEecCCCcEEEEECCC--CEEE
Confidence 3468999988 322 2468899987 7777554 11 0 01111224444567 8999876432 4556
Q ss_pred E-cC
Q 043369 182 I-PR 184 (526)
Q Consensus 182 y-P~ 184 (526)
| +.
T Consensus 97 ~d~~ 100 (314)
T 1pjx_A 97 VQTD 100 (314)
T ss_dssp EETT
T ss_pred EeCC
Confidence 6 55
No 151
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=93.24 E-value=5.1 Score=38.55 Aligned_cols=105 Identities=8% Similarity=0.004 Sum_probs=59.4
Q ss_pred eEEEEecCCeEEEEecccCCCCCccCCCCccccCccccCCCCcceEEEEeCCCCcEEeCccCCccccccceEcCCCcEEE
Q 043369 42 MHMALLPNDRIIAFDRSHFGPSNITLPQGKCIKGVELETSDCYAHAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQ 121 (526)
Q Consensus 42 ~~~a~l~~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~v 121 (526)
...+.-++|++|+.+... + ...+||+.+++++.+.........+.+..++|++++
T Consensus 48 ~~~~~~~~g~l~~~~~~~----------~---------------~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v 102 (333)
T 2dg1_A 48 EGLNFDRQGQLFLLDVFE----------G---------------NIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFV 102 (333)
T ss_dssp EEEEECTTSCEEEEETTT----------C---------------EEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEE
T ss_pred cCcEECCCCCEEEEECCC----------C---------------EEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEE
Confidence 344445789988776532 1 356789998887765422222222334457899988
Q ss_pred EcCCC-CCccEEEEEcCCCCCCcccccCCCCCcccccceeEEecCCcEEEEcC
Q 043369 122 TGGYR-LGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPNGKIIVVGG 173 (526)
Q Consensus 122 ~GG~~-~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~dG~v~viGG 173 (526)
..... .....+.+||+. +...... .........-...+.-++|++|+...
T Consensus 103 ~~~~~~~~~~~i~~~d~~-~~~~~~~-~~~~~~~~~~~~i~~d~~g~l~v~~~ 153 (333)
T 2dg1_A 103 CYLGDFKSTGGIFAATEN-GDNLQDI-IEDLSTAYCIDDMVFDSKGGFYFTDF 153 (333)
T ss_dssp EECTTSSSCCEEEEECTT-SCSCEEE-ECSSSSCCCEEEEEECTTSCEEEEEC
T ss_pred EeCCCCCCCceEEEEeCC-CCEEEEE-EccCccCCcccceEECCCCCEEEEec
Confidence 75431 112478899998 6654322 01111122223455566899998654
No 152
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=93.23 E-value=7.7 Score=38.97 Aligned_cols=87 Identities=13% Similarity=0.104 Sum_probs=48.9
Q ss_pred eEEEEeCCCCcEEeCccCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCc-ccccceeEEec
Q 043369 86 HAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLIS-PRWYASNQILP 164 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~-~R~y~s~~~L~ 164 (526)
...+||..+++-......+...+ .++..|+.+++.|+.. ..+.++|.. ....... .+.. ...-......+
T Consensus 170 ~v~iWd~~~~~~~~~~~~h~~~v--~~~s~~~~~l~sgs~d---~~i~~~d~~-~~~~~~~---~~~~h~~~~~~~~~~~ 240 (420)
T 4gga_A 170 EVQLWDVQQQKRLRNMTSHSARV--GSLSWNSYILSSGSRS---GHIHHHDVR-VAEHHVA---TLSGHSQEVCGLRWAP 240 (420)
T ss_dssp CEEEEETTTTEEEEEECCCSSCE--EEEEEETTEEEEEETT---SEEEEEETT-SSSCEEE---EEECCSSCEEEEEECT
T ss_pred eEEEEEcCCCcEEEEEeCCCCce--EEEeeCCCEEEEEeCC---CceeEeeec-ccceeeE---EecccccceeeeeecC
Confidence 57789988876543322232222 2344588999998863 467788875 3322111 1111 11122344556
Q ss_pred CCcEEEEcCccCCeEEEE
Q 043369 165 NGKIIVVGGRFQFTYEFI 182 (526)
Q Consensus 165 dG~v~viGG~~~~~~E~y 182 (526)
+|+.++.|+.++ .+.+|
T Consensus 241 ~g~~l~s~~~D~-~v~i~ 257 (420)
T 4gga_A 241 DGRHLASGGNDN-LVNVW 257 (420)
T ss_dssp TSSEEEEEETTS-CEEEE
T ss_pred CCCeeeeeeccc-cceEE
Confidence 889998888765 35555
No 153
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=93.12 E-value=5.6 Score=38.89 Aligned_cols=107 Identities=9% Similarity=0.079 Sum_probs=54.5
Q ss_pred eEcC-CCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEec---CCcEEEEcCccCCeEEEE-cCCC
Q 043369 112 ALLA-NGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILP---NGKIIVVGGRFQFTYEFI-PRTS 186 (526)
Q Consensus 112 ~~l~-~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~---dG~v~viGG~~~~~~E~y-P~~~ 186 (526)
...+ ++.++++|+.. ..+.+||.. +.+-... -... ..-.+....+ +++++++|+.++ .+.+| ..+.
T Consensus 106 ~~~~~~~~~l~s~~~d---~~i~iwd~~-~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~d~~~~ 176 (408)
T 4a11_B 106 QWYPHDTGMFTSSSFD---KTLKVWDTN-TLQTADV--FNFE--ETVYSHHMSPVSTKHCLVAVGTRGP-KVQLCDLKSG 176 (408)
T ss_dssp EECTTCTTCEEEEETT---SEEEEEETT-TTEEEEE--EECS--SCEEEEEECSSCSSCCEEEEEESSS-SEEEEESSSS
T ss_pred EEccCCCcEEEEEeCC---CeEEEeeCC-CCcccee--ccCC--CceeeeEeecCCCCCcEEEEEcCCC-eEEEEeCCCc
Confidence 3455 67788888763 578899987 5433222 1111 1112233333 455888887664 46666 4433
Q ss_pred CCCCcceeecCCccccCCCCCCCCCCcceEEEecCCc-EEEEEccc--eEEEeccCCe
Q 043369 187 DSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGN-LFIFANDR--AILLDYVNNR 241 (526)
Q Consensus 187 ~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~-Iy~~Gg~~--~~~yDp~t~~ 241 (526)
. .-..+... . .... .+...++++ +++.|+.+ ..+||..+..
T Consensus 177 ~----~~~~~~~~--~-------~~v~-~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~ 220 (408)
T 4a11_B 177 S----CSHILQGH--R-------QEIL-AVSWSPRYDYILATASADSRVKLWDVRRAS 220 (408)
T ss_dssp C----CCEEECCC--C-------SCEE-EEEECSSCTTEEEEEETTSCEEEEETTCSS
T ss_pred c----eeeeecCC--C-------CcEE-EEEECCCCCcEEEEEcCCCcEEEEECCCCC
Confidence 1 11111110 0 0011 123456776 78777753 6788887643
No 154
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=93.09 E-value=6.1 Score=37.48 Aligned_cols=137 Identities=11% Similarity=0.030 Sum_probs=68.1
Q ss_pred eEEEEeCCCCcEEeCccCCcc--ccccceEcCCCc-EEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCc----ccccc
Q 043369 86 HAVEFDPITRKVRPLTIQTDT--WCSSGALLANGV-LVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLIS----PRWYA 158 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~~~~--fc~~~~~l~~G~-l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~----~R~y~ 158 (526)
...+||+.+++....-..... .....+..+||+ +|+.+.. ...+.+||+. +.+-... -.... ...-.
T Consensus 12 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~---~~~v~~~d~~-~~~~~~~--~~~~~~~~~~~~~~ 85 (337)
T 1pby_B 12 KLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNK---SESLVKIDLV-TGETLGR--IDLSTPEERVKSLF 85 (337)
T ss_dssp EEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETT---TTEEEEEETT-TCCEEEE--EECCBTTEEEECTT
T ss_pred eEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCC---CCeEEEEECC-CCCeEee--EEcCCccccccccc
Confidence 456677777665432211111 123345667885 5565543 2578999987 5543321 01111 00122
Q ss_pred eeEEecCCcEEEEcCc-----------cCCeEEEE-cCCCCCCCccee-ecCCccccCCCCCCCCCCcceEEEecCCcEE
Q 043369 159 SNQILPNGKIIVVGGR-----------FQFTYEFI-PRTSDSDRKILY-QLPFLKETMHSPKIPNNLYPFLHLSTDGNLF 225 (526)
Q Consensus 159 s~~~L~dG~v~viGG~-----------~~~~~E~y-P~~~~~~~~~w~-~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy 225 (526)
.++.-+||+.++++.. ....+.+| ..+. +.. .++.- . ... .....+||+.+
T Consensus 86 ~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~-----~~~~~~~~~-~---------~~~-~~~~s~dg~~l 149 (337)
T 1pby_B 86 GAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETL-----SRRKAFEAP-R---------QIT-MLAWARDGSKL 149 (337)
T ss_dssp CEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTT-----EEEEEEECC-S---------SCC-CEEECTTSSCE
T ss_pred ceEECCCCCEEEEEecccccccccccccCceEEEEECCCC-----cEEEEEeCC-C---------Ccc-eeEECCCCCEE
Confidence 3455568854444421 12356666 4433 221 11110 0 001 13356788855
Q ss_pred EEEccceEEEeccCCeEEE
Q 043369 226 IFANDRAILLDYVNNRVMK 244 (526)
Q Consensus 226 ~~Gg~~~~~yDp~t~~w~~ 244 (526)
++++....+||..+++...
T Consensus 150 ~~~~~~i~~~d~~~~~~~~ 168 (337)
T 1pby_B 150 YGLGRDLHVMDPEAGTLVE 168 (337)
T ss_dssp EEESSSEEEEETTTTEEEE
T ss_pred EEeCCeEEEEECCCCcEee
Confidence 5556778899999887653
No 155
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=92.93 E-value=8.9 Score=38.95 Aligned_cols=112 Identities=10% Similarity=0.023 Sum_probs=56.7
Q ss_pred ceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEecCCc-EEEEcCccCCeEEEE-cCCCCC
Q 043369 111 GALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPNGK-IIVVGGRFQFTYEFI-PRTSDS 188 (526)
Q Consensus 111 ~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~dG~-v~viGG~~~~~~E~y-P~~~~~ 188 (526)
-++.++|+||++... ...+++||+. +..-... ......++ .+.-++|+ +|+........+..+ +... +
T Consensus 136 la~d~~g~lyv~d~~---~~~I~~id~~-~g~~~~~-~~~~~~~~----ia~~~~g~~l~~~d~~~~~~I~~~d~~~~-~ 205 (409)
T 3hrp_A 136 IAAVGNNTVLAYQRD---DPRVRLISVD-DNKVTTV-HPGFKGGK----PAVTKDKQRVYSIGWEGTHTVYVYMKASG-W 205 (409)
T ss_dssp EEECSTTEEEEEETT---TTEEEEEETT-TTEEEEE-EETCCBCB----CEECTTSSEEEEEBSSTTCEEEEEEGGGT-T
T ss_pred EEEeCCCCEEEEecC---CCcEEEEECC-CCEEEEe-eccCCCCc----eeEecCCCcEEEEecCCCceEEEEEcCCC-c
Confidence 344578999998753 3689999997 6544333 11111111 44555665 454443222245555 4432 1
Q ss_pred CCcceeec-CCccccCCCCCCCCCCcce-EEEec-CCcEEEEEcc-ceEEEeccCCeEE
Q 043369 189 DRKILYQL-PFLKETMHSPKIPNNLYPF-LHLST-DGNLFIFAND-RAILLDYVNNRVM 243 (526)
Q Consensus 189 ~~~~w~~~-p~l~~~~~~~~~~~~~yp~-~~~~~-dG~Iy~~Gg~-~~~~yDp~t~~w~ 243 (526)
....+ ...... ..+|+ +.+.+ +|+||+.-.. ...+||+.+....
T Consensus 206 ---~~~~~g~~~~~~--------~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~ 253 (409)
T 3hrp_A 206 ---APTRIGQLGSTF--------SGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVT 253 (409)
T ss_dssp ---CEEEEEECCTTS--------CSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEE
T ss_pred ---eeEEeeeccchh--------cCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEE
Confidence 11122 000000 11233 33455 7899984332 3678899877643
No 156
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=92.62 E-value=2 Score=41.32 Aligned_cols=142 Identities=14% Similarity=0.100 Sum_probs=72.2
Q ss_pred eEEEEeCCCCcEEeCccCCcc-ccccceEcCCCc-EEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCc-----ccccc
Q 043369 86 HAVEFDPITRKVRPLTIQTDT-WCSSGALLANGV-LVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLIS-----PRWYA 158 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~~~~-fc~~~~~l~~G~-l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~-----~R~y~ 158 (526)
...+||+.+++....-..... .....+..+||+ +|+.+.. ...+.+||+. +.+-... ..+.. ...-.
T Consensus 22 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~---~~~i~~~d~~-t~~~~~~--~~~~~~~~~~~~~~~ 95 (349)
T 1jmx_B 22 NLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH---YGDIYGIDLD-TCKNTFH--ANLSSVPGEVGRSMY 95 (349)
T ss_dssp EEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETT---TTEEEEEETT-TTEEEEE--EESCCSTTEEEECSS
T ss_pred eEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCC---CCcEEEEeCC-CCcEEEE--EEccccccccccccc
Confidence 467889888776432222221 122344567887 5566532 2578999987 6543321 11211 11112
Q ss_pred eeEEecCCcEEEEcCcc-----------CCeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEE
Q 043369 159 SNQILPNGKIIVVGGRF-----------QFTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFI 226 (526)
Q Consensus 159 s~~~L~dG~v~viGG~~-----------~~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~ 226 (526)
..+.-+||+.+++++.+ ...+.+| ..++. .-........ +.... .+...+||++|+
T Consensus 96 ~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~----~~~~~~~~~~-------~~~~~-~~~~s~dg~l~~ 163 (349)
T 1jmx_B 96 SFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGL----EAKPVRTFPM-------PRQVY-LMRAADDGSLYV 163 (349)
T ss_dssp CEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGG----GBCCSEEEEC-------CSSCC-CEEECTTSCEEE
T ss_pred ceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCcc----ccceeeeccC-------CCccc-ceeECCCCcEEE
Confidence 34555689877777643 2355666 44320 0000000000 00111 123467999776
Q ss_pred EEccceEEEeccCCeEEEec
Q 043369 227 FANDRAILLDYVNNRVMKNY 246 (526)
Q Consensus 227 ~Gg~~~~~yDp~t~~w~~~~ 246 (526)
++.+..+||..+++....+
T Consensus 164 -~~~~i~~~d~~~~~~~~~~ 182 (349)
T 1jmx_B 164 -AGPDIYKMDVKTGKYTVAL 182 (349)
T ss_dssp -ESSSEEEECTTTCCEEEEE
T ss_pred -ccCcEEEEeCCCCceeccc
Confidence 5566889999988765434
No 157
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=92.45 E-value=2.8 Score=40.40 Aligned_cols=119 Identities=13% Similarity=0.042 Sum_probs=68.3
Q ss_pred CccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCccccc-ceeEEecCCcEEEEcCccCCeEEEE
Q 043369 104 TDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWY-ASNQILPNGKIIVVGGRFQFTYEFI 182 (526)
Q Consensus 104 ~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y-~s~~~L~dG~v~viGG~~~~~~E~y 182 (526)
...|..+-.. .|+++|+..|. .|...++.+|+. +.+-... .++. ++-+ .+.+.. +++||++-..+ ..+-+|
T Consensus 41 ~~~ftqGL~~-~~~~LyestG~-~g~S~v~~vD~~-Tgkv~~~--~~l~-~~~FgeGit~~-g~~ly~ltw~~-~~v~v~ 112 (262)
T 3nol_A 41 TKAFTEGFFY-RNGYFYESTGL-NGRSSIRKVDIE-SGKTLQQ--IELG-KRYFGEGISDW-KDKIVGLTWKN-GLGFVW 112 (262)
T ss_dssp TTCEEEEEEE-ETTEEEEEEEE-TTEEEEEEECTT-TCCEEEE--EECC-TTCCEEEEEEE-TTEEEEEESSS-SEEEEE
T ss_pred CCcccceEEE-ECCEEEEECCC-CCCceEEEEECC-CCcEEEE--EecC-CccceeEEEEe-CCEEEEEEeeC-CEEEEE
Confidence 3455554443 48999999886 356789999999 7765443 2343 2322 334444 78999996544 345666
Q ss_pred -cCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCC-cEEEEEc-cceEEEeccCCeEEEecc
Q 043369 183 -PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDG-NLFIFAN-DRAILLDYVNNRVMKNYP 247 (526)
Q Consensus 183 -P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG-~Iy~~Gg-~~~~~yDp~t~~w~~~~p 247 (526)
+.+.. .-..++.-. ++.. +..|| ++|+.-| .....+||.+.+....++
T Consensus 113 D~~t~~----~~~ti~~~~------------eG~g-lt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~ 163 (262)
T 3nol_A 113 NIRNLR----QVRSFNYDG------------EGWG-LTHNDQYLIMSDGTPVLRFLDPESLTPVRTIT 163 (262)
T ss_dssp ETTTCC----EEEEEECSS------------CCCC-EEECSSCEEECCSSSEEEEECTTTCSEEEEEE
T ss_pred ECccCc----EEEEEECCC------------CceE-EecCCCEEEEECCCCeEEEEcCCCCeEEEEEE
Confidence 65541 111222210 1122 33455 5565543 236789999988765443
No 158
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=91.85 E-value=2.5 Score=40.82 Aligned_cols=83 Identities=10% Similarity=-0.008 Sum_probs=48.9
Q ss_pred eEEEEeCCC-CcEEeCccCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEec
Q 043369 86 HAVEFDPIT-RKVRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILP 164 (526)
Q Consensus 86 ~~~~yDp~t-~~w~~~~~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~ 164 (526)
...+||..+ .+....-..+..........++|+.+++|+.. ..+.+||.. +.+.... +........++..+
T Consensus 198 ~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~v~d~~-~~~~~~~----~~~~~~~~~~~~~~ 269 (369)
T 3zwl_B 198 KISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRD---TNSFLVDVS-TLQVLKK----YETDCPLNTAVITP 269 (369)
T ss_dssp EEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETT---SEEEEEETT-TCCEEEE----EECSSCEEEEEECS
T ss_pred EEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCC---ceEEEEECC-CCceeee----ecCCCCceeEEecC
Confidence 467899877 33222211222222234556799999998763 478999987 5443322 22223334556667
Q ss_pred CCcEEEEcCccC
Q 043369 165 NGKIIVVGGRFQ 176 (526)
Q Consensus 165 dG~v~viGG~~~ 176 (526)
+|+.+++|+.+.
T Consensus 270 ~~~~l~~~~~~~ 281 (369)
T 3zwl_B 270 LKEFIILGGGQE 281 (369)
T ss_dssp SSSEEEEEECCC
T ss_pred CCceEEEeecCC
Confidence 899999888654
No 159
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=91.73 E-value=5.9 Score=38.53 Aligned_cols=139 Identities=12% Similarity=0.015 Sum_probs=76.2
Q ss_pred eEEEEeCCCCcEEeCc-cCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcc--cccCCCCCcccccceeEE
Q 043369 86 HAVEFDPITRKVRPLT-IQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWE--EDHQNGLISPRWYASNQI 162 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~-~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~--~~~~~~m~~~R~y~s~~~ 162 (526)
...+||..+++..... ..+...+.....-+||.++++|+.+ ..+++||.. +.+-. .. .......-.+++-
T Consensus 150 ~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~d---g~i~iwd~~-~~~~~~~~~---~~~h~~~v~~l~f 222 (343)
T 3lrv_A 150 TIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPD---GILDVYNLS-SPDQASSRF---PVDEEAKIKEVKF 222 (343)
T ss_dssp CEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTT---SCEEEEESS-CTTSCCEEC---CCCTTSCEEEEEE
T ss_pred cEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCC---CEEEEEECC-CCCCCccEE---eccCCCCEEEEEE
Confidence 4678999888764432 2223223345667899999999863 579999987 55433 11 1111222234444
Q ss_pred ecCCcEEEEcCccCCeEEEE-cCCCCCCCcceeecCCcc-ccCCCCCCCCCCcceEEEecCCcEEEEE---ccceEEEec
Q 043369 163 LPNGKIIVVGGRFQFTYEFI-PRTSDSDRKILYQLPFLK-ETMHSPKIPNNLYPFLHLSTDGNLFIFA---NDRAILLDY 237 (526)
Q Consensus 163 L~dG~v~viGG~~~~~~E~y-P~~~~~~~~~w~~~p~l~-~~~~~~~~~~~~yp~~~~~~dG~Iy~~G---g~~~~~yDp 237 (526)
-+||+.++.|+ +. .+.+| .++.. .-..+..+. .... ... ..+...++|+.++.| +....+||.
T Consensus 223 s~~g~~l~s~~-~~-~v~iwd~~~~~----~~~~~~~~~~~~~~-----~~~-~~~~~~~~g~~l~~~s~~d~~i~v~~~ 290 (343)
T 3lrv_A 223 ADNGYWMVVEC-DQ-TVVCFDLRKDV----GTLAYPTYTIPEFK-----TGT-VTYDIDDSGKNMIAYSNESNSLTIYKF 290 (343)
T ss_dssp CTTSSEEEEEE-SS-BEEEEETTSST----TCBSSCCCBC----------CC-EEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred eCCCCEEEEEe-CC-eEEEEEcCCCC----cceeeccccccccc-----ccc-eEEEECCCCCEEEEecCCCCcEEEEEE
Confidence 56899998888 43 78888 44431 111111100 0000 000 123445689988883 345677777
Q ss_pred --cCCeEE
Q 043369 238 --VNNRVM 243 (526)
Q Consensus 238 --~t~~w~ 243 (526)
....|.
T Consensus 291 ~~~~~~~~ 298 (343)
T 3lrv_A 291 DKKTKNWT 298 (343)
T ss_dssp CTTTCSEE
T ss_pred cccccceE
Confidence 445676
No 160
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=91.72 E-value=2.6 Score=42.41 Aligned_cols=86 Identities=10% Similarity=0.055 Sum_probs=47.1
Q ss_pred EeCCCCcEEeCccCCccccccceEcC-CCcEEEEcCCCCCccEEEEEcCCCC---CC-cccccCCCCCcccccceeEEec
Q 043369 90 FDPITRKVRPLTIQTDTWCSSGALLA-NGVLVQTGGYRLGERVVRYLKPCSD---CD-WEEDHQNGLISPRWYASNQILP 164 (526)
Q Consensus 90 yDp~t~~w~~~~~~~~~fc~~~~~l~-~G~l~v~GG~~~g~~~v~~ydp~~t---~~-W~~~~~~~m~~~R~y~s~~~L~ 164 (526)
|++.......+...+.......+..+ +|+++++|+.+ ..+++||.. + .. +... ..+.....-.+++..+
T Consensus 48 w~~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~d---g~v~vwd~~-~~~~~~~~~~~--~~~~h~~~v~~~~~~~ 121 (437)
T 3gre_A 48 GNLRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQ---GVIKIWNLK-EIIVGEVYSSS--LTYDCSSTVTQITMIP 121 (437)
T ss_dssp GGCCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETT---SEEEEEEHH-HHHTTCCCSCS--EEEECSSCEEEEEECT
T ss_pred ccccceEEeeeccCCCCceEEEEECCCCCCEEEEecCC---ceEEEeECc-ccccCccccee--eeccCCCCEEEEEEeC
Confidence 55544444444333333333345667 89999999863 478899875 3 22 1111 0111122223455566
Q ss_pred CCcEEEEcCccCCeEEEE
Q 043369 165 NGKIIVVGGRFQFTYEFI 182 (526)
Q Consensus 165 dG~v~viGG~~~~~~E~y 182 (526)
+++.++.|+.++ .+.+|
T Consensus 122 ~~~~l~s~s~dg-~i~vw 138 (437)
T 3gre_A 122 NFDAFAVSSKDG-QIIVL 138 (437)
T ss_dssp TSSEEEEEETTS-EEEEE
T ss_pred CCCEEEEEeCCC-EEEEE
Confidence 889999988764 44455
No 161
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=91.48 E-value=9.5 Score=36.02 Aligned_cols=112 Identities=12% Similarity=0.098 Sum_probs=63.6
Q ss_pred CCcEEEcccCCccceeEEEEecCCe-EEEEecccCCCCCccCCCCccccCccccCCCCcceEEEEeCCCCcEEeCccCCc
Q 043369 27 EGKWKLLKRSIGVSAMHMALLPNDR-IIAFDRSHFGPSNITLPQGKCIKGVELETSDCYAHAVEFDPITRKVRPLTIQTD 105 (526)
Q Consensus 27 ~g~W~~~~~~~~v~~~~~a~l~~gk-v~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~yDp~t~~w~~~~~~~~ 105 (526)
..+++.+... ...+...+.-++|+ +|+.+... + ....||+.++ .+......
T Consensus 17 ~~~~~~l~~~-~~~~eg~~~d~~g~~l~~~~~~~----------~---------------~i~~~~~~~~-~~~~~~~~- 68 (296)
T 3e5z_A 17 GAEARRLADG-FTWTEGPVYVPARSAVIFSDVRQ----------N---------------RTWAWSDDGQ-LSPEMHPS- 68 (296)
T ss_dssp TCCCEEEECC-CSSEEEEEEEGGGTEEEEEEGGG----------T---------------EEEEEETTSC-EEEEESSC-
T ss_pred CCcEEEEecC-CccccCCeEeCCCCEEEEEeCCC----------C---------------EEEEEECCCC-eEEEECCC-
Confidence 3566666532 22345556668887 77776542 1 3567899887 55543321
Q ss_pred cccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcc--cccceeEEecCCcEEEE
Q 043369 106 TWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISP--RWYASNQILPNGKIIVV 171 (526)
Q Consensus 106 ~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~--R~y~s~~~L~dG~v~vi 171 (526)
....+.+.-++|++++.... ...+.+||+. +.+.... ....... ..-..++.-++|++|+.
T Consensus 69 ~~~~~l~~~~dg~l~v~~~~---~~~i~~~d~~-~g~~~~~-~~~~~~~~~~~~~~i~~d~~G~l~vt 131 (296)
T 3e5z_A 69 HHQNGHCLNKQGHLIACSHG---LRRLERQREP-GGEWESI-ADSFEGKKLNSPNDVCLAPDGSLWFS 131 (296)
T ss_dssp SSEEEEEECTTCCEEEEETT---TTEEEEECST-TCCEEEE-ECEETTEECCCCCCEEECTTSCEEEE
T ss_pred CCcceeeECCCCcEEEEecC---CCeEEEEcCC-CCcEEEE-eeccCCCCCCCCCCEEECCCCCEEEE
Confidence 12223445578999887532 2578999997 6665543 1110111 11124566679999997
No 162
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=91.48 E-value=19 Score=39.58 Aligned_cols=250 Identities=11% Similarity=0.015 Sum_probs=121.7
Q ss_pred EEEEeCCCCcEEeCcc---CCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEe
Q 043369 87 AVEFDPITRKVRPLTI---QTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQIL 163 (526)
Q Consensus 87 ~~~yDp~t~~w~~~~~---~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L 163 (526)
...||+.+++++.... .............+|+|++ |... ..+.+||+. +.++.......+.... -.+.+.-
T Consensus 385 l~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~---~Gl~~~~~~-~~~~~~~~~~~~~~~~-v~~i~~d 458 (781)
T 3v9f_A 385 INVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYL---GNISYYNTR-LKKFQIIELEKNELLD-VRVFYED 458 (781)
T ss_dssp EEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETT---EEEEEECSS-SCEEEECCSTTTCCCC-EEEEEEC
T ss_pred EEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-Eecc---CCEEEEcCC-CCcEEEeccCCCCCCe-EEEEEEC
Confidence 4567777766665421 1111111122234688877 3221 457889998 7777665111122222 2234444
Q ss_pred cCCcEEEEcCccCCeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcce-EEEecCCcEEEEEc-cceEEEeccCC
Q 043369 164 PNGKIIVVGGRFQFTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPF-LHLSTDGNLFIFAN-DRAILLDYVNN 240 (526)
Q Consensus 164 ~dG~v~viGG~~~~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~-~~~~~dG~Iy~~Gg-~~~~~yDp~t~ 240 (526)
.+|++++... ..+-+| +.++ .+......... . .. ..+.. ...-.+|+|++... ....+||++++
T Consensus 459 ~~g~lwigt~---~Gl~~~~~~~~-----~~~~~~~~~~~-~---~~-~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~ 525 (781)
T 3v9f_A 459 KNKKIWIGTH---AGVFVIDLASK-----KVIHHYDTSNS-Q---LL-ENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQ 525 (781)
T ss_dssp TTSEEEEEET---TEEEEEESSSS-----SCCEEECTTTS-S---CS-CSCEEEEEECTTCCEEEEESSSCEEEECTTCC
T ss_pred CCCCEEEEEC---CceEEEeCCCC-----eEEecccCccc-c---cc-cceeEEEEEcCCCCEEEEEcCCCEEEEeCCCC
Confidence 5688887432 345566 7665 33322111100 0 00 11111 22334789887653 45788999998
Q ss_pred eEEEeccCCCCCCCCccCCCCceeecccccccccccccCCCCCccCcEEEEEcCCCCCCCchhhhhhcccccccceEEEE
Q 043369 241 RVMKNYPVMPGGISRNYPSTGSSVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLT 320 (526)
Q Consensus 241 ~w~~~~p~~p~~~~r~y~~~g~~v~lp~~~~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d 320 (526)
++.. +.. +.+.+.. ....++. ..+|+|++... . + -+.+||
T Consensus 526 ~~~~-~~~-~~~l~~~----~i~~i~~----------------d~~g~lWi~T~-~-G----------------lv~~~d 565 (781)
T 3v9f_A 526 LVRK-FNQ-YEGFCSN----TINQIYR----------------SSKGQMWLATG-E-G----------------LVCFPS 565 (781)
T ss_dssp EEEE-ECT-TTTCSCS----CEEEEEE----------------CTTSCEEEEET-T-E----------------EEEESC
T ss_pred eEEE-ccC-CCCCCCC----eeEEEEE----------------CCCCCEEEEEC-C-C----------------ceEEEC
Confidence 8763 432 1110100 1111110 12677776532 1 1 013455
Q ss_pred eecCCCCcee---c-ccCccccccceEEeCCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCcEeecCC---CCccc
Q 043369 321 ITAQNPKWEM---E-EMPLNRVMGDMILLPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINRFRILSP---SLIPR 393 (526)
Q Consensus 321 ~~~~~~~W~~---~-~M~~~R~~~~~vvLpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~Wt~~a~---~~~~R 393 (526)
+. +.+++. . .++.... .+.+.-.+|+|++.+. . | +.+|||++.+++.... ++...
T Consensus 566 ~~--~~~~~~~~~~~gl~~~~i-~~i~~d~~g~lW~~t~-~-G-------------l~~~~~~~~~~~~~~~~dGl~~~~ 627 (781)
T 3v9f_A 566 AR--NFDYQVFQRKEGLPNTHI-RAISEDKNGNIWASTN-T-G-------------ISCYITSKKCFYTYDHSNNIPQGS 627 (781)
T ss_dssp TT--TCCCEEECGGGTCSCCCC-CEEEECSSSCEEEECS-S-C-------------EEEEETTTTEEEEECGGGTCCSSC
T ss_pred CC--CCcEEEccccCCCCCceE-EEEEECCCCCEEEEcC-C-c-------------eEEEECCCCceEEecccCCccccc
Confidence 43 233432 1 3443333 2334446799988642 1 2 4689999998765432 33222
Q ss_pred cccccceecCCCEEEEecCC
Q 043369 394 LYHSTAHLLSDGRVLVGGSN 413 (526)
Q Consensus 394 ~yhs~a~LlpdG~V~v~GG~ 413 (526)
....+++..+||++|++|.+
T Consensus 628 f~~~~~~~~~~G~l~~g~~~ 647 (781)
T 3v9f_A 628 FISGCVTKDHNGLIYFGSIN 647 (781)
T ss_dssp EEEEEEEECTTSCEEEEETT
T ss_pred cccCceEECCCCEEEEECCC
Confidence 22234566789999998764
No 163
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=91.46 E-value=5.3 Score=38.39 Aligned_cols=98 Identities=12% Similarity=0.058 Sum_probs=49.5
Q ss_pred EEEEEcCCCCCCccc-ccC-CCCCcccccceeEEecC----CcEEEEcCccCCeEEEE-cCCCCCCCcceeecCCccccC
Q 043369 131 VVRYLKPCSDCDWEE-DHQ-NGLISPRWYASNQILPN----GKIIVVGGRFQFTYEFI-PRTSDSDRKILYQLPFLKETM 203 (526)
Q Consensus 131 ~v~~ydp~~t~~W~~-~~~-~~m~~~R~y~s~~~L~d----G~v~viGG~~~~~~E~y-P~~~~~~~~~w~~~p~l~~~~ 203 (526)
.+.+||.. +..... ... ........-.+++-.++ |+++++|+.++ .+.+| ..+.. .-..+.. ..
T Consensus 45 ~v~vw~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg-~i~v~d~~~~~----~~~~~~~--~~- 115 (366)
T 3k26_A 45 RVTLYECH-SQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRG-IIRIINPITMQ----CIKHYVG--HG- 115 (366)
T ss_dssp EEEEEEEC-GGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTC-EEEEECTTTCC----EEEEEES--CC-
T ss_pred EEEEEEcC-CCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCC-EEEEEEchhce----EeeeecC--CC-
Confidence 68888876 443321 100 00001121223444446 67888888664 56777 44431 1111110 00
Q ss_pred CCCCCCCCCcceEEEec-CCcEEEEEccc--eEEEeccCCeEEE
Q 043369 204 HSPKIPNNLYPFLHLST-DGNLFIFANDR--AILLDYVNNRVMK 244 (526)
Q Consensus 204 ~~~~~~~~~yp~~~~~~-dG~Iy~~Gg~~--~~~yDp~t~~w~~ 244 (526)
.... .+...+ ++++++.|+.+ ..+||..+++...
T Consensus 116 ------~~i~-~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 152 (366)
T 3k26_A 116 ------NAIN-ELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVA 152 (366)
T ss_dssp ------SCEE-EEEECSSCTTEEEEEETTSCEEEEETTTTEEEE
T ss_pred ------CcEE-EEEECCCCCCEEEEEeCCCeEEEEEeecCeEEE
Confidence 0111 123345 88999888754 6789998877553
No 164
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=91.28 E-value=7.9 Score=39.20 Aligned_cols=136 Identities=9% Similarity=0.034 Sum_probs=75.6
Q ss_pred eEEEEeCCCCcEEeCccCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEecC
Q 043369 86 HAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPN 165 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~d 165 (526)
...+||..+++.+.+..... .......-+||+.+++.+..++...+.++|.. +.+...+ .. ......+.+--+|
T Consensus 204 ~i~~~d~~tg~~~~l~~~~~-~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~-~~~~~~l--~~--~~~~~~~~~~spd 277 (415)
T 2hqs_A 204 ALVIQTLANGAVRQVASFPR-HNGAPAFSPDGSKLAFALSKTGSLNLYVMDLA-SGQIRQV--TD--GRSNNTEPTWFPD 277 (415)
T ss_dssp EEEEEETTTCCEEEEECCSS-CEEEEEECTTSSEEEEEECTTSSCEEEEEETT-TCCEEEC--CC--CSSCEEEEEECTT
T ss_pred EEEEEECCCCcEEEeecCCC-cccCEEEcCCCCEEEEEEecCCCceEEEEECC-CCCEEeC--cC--CCCcccceEECCC
Confidence 56789999988876653322 22334567899866644433455679999988 6655444 11 1122223444568
Q ss_pred CcEEEEcCccCC--eEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcc-eEEEecCCcEEEEEcc-----ceEEEe
Q 043369 166 GKIIVVGGRFQF--TYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYP-FLHLSTDGNLFIFAND-----RAILLD 236 (526)
Q Consensus 166 G~v~viGG~~~~--~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp-~~~~~~dG~Iy~~Gg~-----~~~~yD 236 (526)
|+.+++++.... .+.++ ..+. ....+.. . ..+. .....+||+.++++.. ...++|
T Consensus 278 g~~l~~~s~~~g~~~i~~~d~~~~-----~~~~l~~-----~------~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d 341 (415)
T 2hqs_A 278 SQNLAFTSDQAGRPQVYKVNINGG-----APQRITW-----E------GSQNQDADVSSDGKFMVMVSSNGGQQHIAKQD 341 (415)
T ss_dssp SSEEEEEECTTSSCEEEEEETTSS-----CCEECCC-----S------SSEEEEEEECTTSSEEEEEEECSSCEEEEEEE
T ss_pred CCEEEEEECCCCCcEEEEEECCCC-----CEEEEec-----C------CCcccCeEECCCCCEEEEEECcCCceEEEEEE
Confidence 986666554322 34444 3332 2111111 0 0111 2334679987777653 467889
Q ss_pred ccCCeEE
Q 043369 237 YVNNRVM 243 (526)
Q Consensus 237 p~t~~w~ 243 (526)
..+++..
T Consensus 342 ~~~~~~~ 348 (415)
T 2hqs_A 342 LATGGVQ 348 (415)
T ss_dssp TTTCCEE
T ss_pred CCCCCEE
Confidence 9888764
No 165
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=91.13 E-value=14 Score=37.29 Aligned_cols=136 Identities=12% Similarity=0.017 Sum_probs=77.6
Q ss_pred eEEEEeCCCCcEEeCccCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEecC
Q 043369 86 HAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPN 165 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~d 165 (526)
...+||..+++.+.+.... .........+||+.++++...++...+.++|.. +.+-..+ . ....+..+.+.-+|
T Consensus 248 ~i~~~d~~~~~~~~l~~~~-~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~-~~~~~~l--~--~~~~~~~~~~~spd 321 (415)
T 2hqs_A 248 NLYVMDLASGQIRQVTDGR-SNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNIN-GGAPQRI--T--WEGSQNQDADVSSD 321 (415)
T ss_dssp EEEEEETTTCCEEECCCCS-SCEEEEEECTTSSEEEEEECTTSSCEEEEEETT-SSCCEEC--C--CSSSEEEEEEECTT
T ss_pred eEEEEECCCCCEEeCcCCC-CcccceEECCCCCEEEEEECCCCCcEEEEEECC-CCCEEEE--e--cCCCcccCeEECCC
Confidence 4678899998887765432 223334567899977777654455678888987 6554333 1 11233334455579
Q ss_pred CcEEEEcCccC--CeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEcc-----ceEEEec
Q 043369 166 GKIIVVGGRFQ--FTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFAND-----RAILLDY 237 (526)
Q Consensus 166 G~v~viGG~~~--~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~-----~~~~yDp 237 (526)
|+.+++++.+. ..+.+| ..+. ....+.. . . ..-.....+||+.+++++. ...++|.
T Consensus 322 G~~l~~~~~~~g~~~i~~~d~~~~-----~~~~l~~---~-------~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~ 385 (415)
T 2hqs_A 322 GKFMVMVSSNGGQQHIAKQDLATG-----GVQVLSS---T-------F-LDETPSLAPNGTMVIYSSSQGMGSVLNLVST 385 (415)
T ss_dssp SSEEEEEEECSSCEEEEEEETTTC-----CEEECCC---S-------S-SCEEEEECTTSSEEEEEEEETTEEEEEEEET
T ss_pred CCEEEEEECcCCceEEEEEECCCC-----CEEEecC---C-------C-CcCCeEEcCCCCEEEEEEcCCCccEEEEEEC
Confidence 99888777653 245555 4433 2222211 0 0 0112345679997777653 3567787
Q ss_pred cCCeEE
Q 043369 238 VNNRVM 243 (526)
Q Consensus 238 ~t~~w~ 243 (526)
..+...
T Consensus 386 ~g~~~~ 391 (415)
T 2hqs_A 386 DGRFKA 391 (415)
T ss_dssp TSCCEE
T ss_pred CCCcEE
Confidence 766543
No 166
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=91.06 E-value=9.2 Score=36.11 Aligned_cols=137 Identities=15% Similarity=0.072 Sum_probs=75.1
Q ss_pred eEEEEeCCCCcEEeCccC----CccccccceEcCCCcEEEE----cCCC----------CCccEEEEEcCCCCCCccccc
Q 043369 86 HAVEFDPITRKVRPLTIQ----TDTWCSSGALLANGVLVQT----GGYR----------LGERVVRYLKPCSDCDWEEDH 147 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~----~~~fc~~~~~l~~G~l~v~----GG~~----------~g~~~v~~ydp~~t~~W~~~~ 147 (526)
....||+.+++.+.+... ...+....++.++|++|++ |... .+...+..||+. . +....
T Consensus 91 ~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g-~~~~~- 167 (296)
T 3e5z_A 91 RLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-G-TLSAP- 167 (296)
T ss_dssp EEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-S-CEEEE-
T ss_pred eEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-C-CEEEe-
Confidence 467899988888765321 1122334566789999997 4310 112478888885 2 33322
Q ss_pred CCCCCcccccceeEEecCCcEEEEcCccCCeEEEE-cCCCCCCCcce-eecCCccccCCCCCCCCCCcce-EEEecCCcE
Q 043369 148 QNGLISPRWYASNQILPNGKIIVVGGRFQFTYEFI-PRTSDSDRKIL-YQLPFLKETMHSPKIPNNLYPF-LHLSTDGNL 224 (526)
Q Consensus 148 ~~~m~~~R~y~s~~~L~dG~v~viGG~~~~~~E~y-P~~~~~~~~~w-~~~p~l~~~~~~~~~~~~~yp~-~~~~~dG~I 224 (526)
...+..+ .+.+.-+||+++ +.......+.+| ...+ ... .....+ ... ..+|. +..-++|+|
T Consensus 168 ~~~~~~~---~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~----g~~~~~~~~~-~~~-------~~~p~~i~~d~~G~l 231 (296)
T 3e5z_A 168 IRDRVKP---NGLAFLPSGNLL-VSDTGDNATHRYCLNAR----GETEYQGVHF-TVE-------PGKTDGLRVDAGGLI 231 (296)
T ss_dssp ECCCSSE---EEEEECTTSCEE-EEETTTTEEEEEEECSS----SCEEEEEEEE-CCS-------SSCCCSEEEBTTSCE
T ss_pred ecCCCCC---ccEEECCCCCEE-EEeCCCCeEEEEEECCC----CcCcCCCeEe-eCC-------CCCCCeEEECCCCCE
Confidence 1223222 245555689988 554444566677 4321 122 111111 100 11222 344569999
Q ss_pred EEEEccceEEEeccCCe
Q 043369 225 FIFANDRAILLDYVNNR 241 (526)
Q Consensus 225 y~~Gg~~~~~yDp~t~~ 241 (526)
|+..+....+||+....
T Consensus 232 ~v~~~~~v~~~~~~g~~ 248 (296)
T 3e5z_A 232 WASAGDGVHVLTPDGDE 248 (296)
T ss_dssp EEEETTEEEEECTTSCE
T ss_pred EEEcCCeEEEECCCCCE
Confidence 99886678899998544
No 167
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=91.05 E-value=18 Score=39.26 Aligned_cols=117 Identities=9% Similarity=-0.054 Sum_probs=67.3
Q ss_pred EEEEecCCeEEEEecccCCCCCccCCCCccccCccccCCCCcceEEEEeCCCCcEEeCccCCccccccceEcCCCcEEEE
Q 043369 43 HMALLPNDRIIAFDRSHFGPSNITLPQGKCIKGVELETSDCYAHAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQT 122 (526)
Q Consensus 43 ~~a~l~~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~v~ 122 (526)
..+..||||.+++.....|. ......++|..+++...............+..+||+.++.
T Consensus 125 ~~~~SPDG~~la~~~~~~G~--------------------~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~ 184 (695)
T 2bkl_A 125 TWAVSWDGKKVAFAQKPNAA--------------------DEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYY 184 (695)
T ss_dssp EEEECTTSSEEEEEEEETTC--------------------SCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEE
T ss_pred EEEECCCCCEEEEEECCCCC--------------------ceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEE
Confidence 34456899888877653210 0135778999998875111122221145667889998887
Q ss_pred cCCCCC----------ccEEEEEcCCCCCCcc--cccCCCC-CcccccceeEEecCCcEEEEcCccC-CeEEEE
Q 043369 123 GGYRLG----------ERVVRYLKPCSDCDWE--EDHQNGL-ISPRWYASNQILPNGKIIVVGGRFQ-FTYEFI 182 (526)
Q Consensus 123 GG~~~g----------~~~v~~ydp~~t~~W~--~~~~~~m-~~~R~y~s~~~L~dG~v~viGG~~~-~~~E~y 182 (526)
+..... ...+.+++.. +..-. .+ ... ..+.+..+...-+||+.+++...+. .+.++|
T Consensus 185 ~~~d~~~~~~~~~~~~~~~v~~~~l~-t~~~~~~lv--~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~ 255 (695)
T 2bkl_A 185 EWLPTDPSIKVDERPGYTTIRYHTLG-TEPSKDTVV--HERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVY 255 (695)
T ss_dssp EECCCCTTSCGGGGGGGCEEEEEETT-SCGGGCEEE--ECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEE
T ss_pred EEecCCCCCccccCCCCCEEEEEECC-CCchhceEE--EecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEE
Confidence 765321 2458888876 54321 11 111 1224555666677998777776554 456666
No 168
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=90.82 E-value=13 Score=36.34 Aligned_cols=73 Identities=11% Similarity=0.125 Sum_probs=39.9
Q ss_pred CCCceecc---cCccccccceEEeCCCcEEEEcCcCCCCCCccCCCCCccccEEEeCC-CCcEeecCC-CCccccccccc
Q 043369 325 NPKWEMEE---MPLNRVMGDMILLPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPK-INRFRILSP-SLIPRLYHSTA 399 (526)
Q Consensus 325 ~~~W~~~~---M~~~R~~~~~vvLpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~-t~~Wt~~a~-~~~~R~yhs~a 399 (526)
...|+... ++........+..+++++|++|+.. .+ ...-+ -.+|+.+.. ...+-.+++++
T Consensus 235 G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g--------------~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~ 299 (327)
T 2xbg_A 235 SENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAG--------------AL-LCSQDGGQTWQQDVDVKKVPSNFYKIL 299 (327)
T ss_dssp EEEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTT--------------CE-EEESSTTSSCEECGGGTTSSSCCCEEE
T ss_pred CCeeEeccCCcccCCcceEEEEecCCCEEEEEeCCC--------------eE-EEeCCCCcccEEcCccCCCCCCeEEEE
Confidence 35788642 3333233343345689999987632 11 12111 248988763 23344455544
Q ss_pred eecCCCEEEEecCC
Q 043369 400 HLLSDGRVLVGGSN 413 (526)
Q Consensus 400 ~LlpdG~V~v~GG~ 413 (526)
.. .+++++++|.+
T Consensus 300 ~~-~~~~~~~~G~~ 312 (327)
T 2xbg_A 300 FF-SPDQGFILGQK 312 (327)
T ss_dssp EE-ETTEEEEECST
T ss_pred EE-CCCceEEEcCC
Confidence 43 68888877753
No 169
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=90.46 E-value=15 Score=36.52 Aligned_cols=30 Identities=7% Similarity=-0.064 Sum_probs=22.0
Q ss_pred eEEeCCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCcEe
Q 043369 342 MILLPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINRFR 384 (526)
Q Consensus 342 ~vvLpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~Wt 384 (526)
...-|||+.++.|+.+ | .+.+||..+.+-.
T Consensus 348 ~~~s~~~~~l~s~s~d-g------------~v~iwd~~~~~~~ 377 (447)
T 3dw8_B 348 CCWNGSDSVVMTGSYN-N------------FFRMFDRNTKRDI 377 (447)
T ss_dssp EEECTTSSEEEEECST-T------------EEEEEETTTCCEE
T ss_pred EEECCCCCEEEEeccC-C------------EEEEEEcCCCcce
Confidence 4566899999988865 2 5678888877543
No 170
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=90.07 E-value=2.7 Score=40.52 Aligned_cols=109 Identities=8% Similarity=0.010 Sum_probs=58.4
Q ss_pred eEcCC---CcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCc-ccccceeEEecCCcEEEEcCccCCeEEEE-cCCC
Q 043369 112 ALLAN---GVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLIS-PRWYASNQILPNGKIIVVGGRFQFTYEFI-PRTS 186 (526)
Q Consensus 112 ~~l~~---G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~-~R~y~s~~~L~dG~v~viGG~~~~~~E~y-P~~~ 186 (526)
..-++ |+++++|+.+ ..+.+||.. +...... ..+.. ...-.+++..+||+.++.|+.++ .+.+| ..+.
T Consensus 46 ~~~~~~~~g~~l~~~~~d---g~i~iw~~~-~~~~~~~--~~~~~h~~~v~~~~~~~~~~~l~s~~~dg-~v~iwd~~~~ 118 (368)
T 3mmy_A 46 SFSPPTLPGNFLIAGSWA---NDVRCWEVQ-DSGQTIP--KAQQMHTGPVLDVCWSDDGSKVFTASCDK-TAKMWDLSSN 118 (368)
T ss_dssp EECCTTSSSEEEEEEETT---SEEEEEEEC-TTSCEEE--EEEEECSSCEEEEEECTTSSEEEEEETTS-EEEEEETTTT
T ss_pred EEcCCCCCceEEEEECCC---CcEEEEEcC-CCCceeE--EEeccccCCEEEEEECcCCCEEEEEcCCC-cEEEEEcCCC
Confidence 34455 6899998863 468888876 4222211 01111 11122344556899888887664 56777 4433
Q ss_pred CCCCcceeecCCccccCCCCCCCCCCcceEEE-ecCCcEEEEEccc--eEEEeccCCe
Q 043369 187 DSDRKILYQLPFLKETMHSPKIPNNLYPFLHL-STDGNLFIFANDR--AILLDYVNNR 241 (526)
Q Consensus 187 ~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~-~~dG~Iy~~Gg~~--~~~yDp~t~~ 241 (526)
..... .... .......+. .++|++++.|+.+ ..+||..+++
T Consensus 119 -----~~~~~--~~~~-------~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 162 (368)
T 3mmy_A 119 -----QAIQI--AQHD-------APVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSN 162 (368)
T ss_dssp -----EEEEE--EECS-------SCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSS
T ss_pred -----Cceee--cccc-------CceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCc
Confidence 22111 1000 011111111 5688888888754 6778887765
No 171
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=90.03 E-value=12 Score=34.76 Aligned_cols=132 Identities=13% Similarity=0.014 Sum_probs=68.4
Q ss_pred eEEEEeCCCCcEEeCccC-CccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCc-ccccceeEEe
Q 043369 86 HAVEFDPITRKVRPLTIQ-TDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLIS-PRWYASNQIL 163 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~-~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~-~R~y~s~~~L 163 (526)
....||+. ++++..... ......+.+...+|++|+.... ...+..||+. .+.... .++. ...-.+.+.-
T Consensus 84 ~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~---~~~i~~~~~~--g~~~~~---~~~~~~~~~~~i~~d 154 (300)
T 2qc5_A 84 KIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLN---GDRIGKLTAD--GTIYEY---DLPNKGSYPAFITLG 154 (300)
T ss_dssp EEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETT---TTEEEEECTT--SCEEEE---ECSSTTCCEEEEEEC
T ss_pred eEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccC---CCeEEEECCC--CCEEEc---cCCCCCCCceeEEEC
Confidence 35678887 666654322 1122223344568999987643 2468889986 333322 1111 1111234445
Q ss_pred cCCcEEEEcCccCCeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEE-EecCCcEEEEEc--cceEEEeccC
Q 043369 164 PNGKIIVVGGRFQFTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLH-LSTDGNLFIFAN--DRAILLDYVN 239 (526)
Q Consensus 164 ~dG~v~viGG~~~~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~-~~~dG~Iy~~Gg--~~~~~yDp~t 239 (526)
++|++|+.... ...+.+| + ++ +....... . ...+|... .-++|+||+... ....+||+ +
T Consensus 155 ~~g~l~v~~~~-~~~i~~~~~-~g-----~~~~~~~~-~--------~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~ 217 (300)
T 2qc5_A 155 SDNALWFTENQ-NNSIGRITN-TG-----KLEEYPLP-T--------NAAAPVGITSGNDGALWFVEIMGNKIGRITT-T 217 (300)
T ss_dssp TTSSEEEEETT-TTEEEEECT-TC-----CEEEEECS-S--------TTCCEEEEEECTTSSEEEEETTTTEEEEECT-T
T ss_pred CCCCEEEEecC-CCeEEEECC-CC-----cEEEeeCC-C--------CCCCcceEEECCCCCEEEEccCCCEEEEEcC-C
Confidence 68998886532 2345566 5 33 33222110 0 01134433 335899998763 34788998 4
Q ss_pred CeEE
Q 043369 240 NRVM 243 (526)
Q Consensus 240 ~~w~ 243 (526)
+++.
T Consensus 218 g~~~ 221 (300)
T 2qc5_A 218 GEIS 221 (300)
T ss_dssp CCEE
T ss_pred CcEE
Confidence 5544
No 172
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=89.91 E-value=13 Score=34.92 Aligned_cols=115 Identities=15% Similarity=0.131 Sum_probs=57.4
Q ss_pred EcCCCcEEEEcCCCCCccEEEEEcCCCCC--CcccccCCCCCcccccceeEE-ec--CCcEEEEcCccCCeEEEE-cCCC
Q 043369 113 LLANGVLVQTGGYRLGERVVRYLKPCSDC--DWEEDHQNGLISPRWYASNQI-LP--NGKIIVVGGRFQFTYEFI-PRTS 186 (526)
Q Consensus 113 ~l~~G~l~v~GG~~~g~~~v~~ydp~~t~--~W~~~~~~~m~~~R~y~s~~~-L~--dG~v~viGG~~~~~~E~y-P~~~ 186 (526)
.-++|+++++|+.+ ..+++||.. +. .+... ..+......-.... .+ |++.++.|+.++ .+.+| ..+.
T Consensus 19 ~~~~~~~l~~~~~d---g~i~iw~~~-~~~~~~~~~--~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg-~v~vwd~~~~ 91 (351)
T 3f3f_A 19 YDFYGRHVATCSSD---QHIKVFKLD-KDTSNWELS--DSWRAHDSSIVAIDWASPEYGRIIASASYDK-TVKLWEEDPD 91 (351)
T ss_dssp ECSSSSEEEEEETT---SEEEEEEEC-SSSCCEEEE--EEEECCSSCEEEEEECCGGGCSEEEEEETTS-CEEEEEECTT
T ss_pred EcCCCCEEEEeeCC---CeEEEEECC-CCCCcceec--ceeccCCCcEEEEEEcCCCCCCEEEEEcCCC-eEEEEecCCC
Confidence 44688889998863 468888875 32 23222 11221222222222 33 589999988764 46666 4332
Q ss_pred CC--CCcceeecCCccccCCCCCCCCCCcceEEEecC--CcEEEEEccc--eEEEeccCCe
Q 043369 187 DS--DRKILYQLPFLKETMHSPKIPNNLYPFLHLSTD--GNLFIFANDR--AILLDYVNNR 241 (526)
Q Consensus 187 ~~--~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~d--G~Iy~~Gg~~--~~~yDp~t~~ 241 (526)
.- ....|.....+.... .... .+...++ +++++.|+.+ ..+||..+.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~------~~v~-~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~ 145 (351)
T 3f3f_A 92 QEECSGRRWNKLCTLNDSK------GSLY-SVKFAPAHLGLKLACLGNDGILRLYDALEPS 145 (351)
T ss_dssp SCTTSSCSEEEEEEECCCS------SCEE-EEEECCGGGCSEEEEEETTCEEEEEECSSTT
T ss_pred cccccccCcceeeeecccC------Ccee-EEEEcCCCCCcEEEEecCCCcEEEecCCChH
Confidence 10 001222211111100 0111 1233456 8888888754 6788877653
No 173
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=89.86 E-value=18 Score=36.52 Aligned_cols=141 Identities=9% Similarity=0.081 Sum_probs=73.1
Q ss_pred eEEEEeCC--CCcEEe-Ccc-CCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCccc-ccCCCCCc-ccccce
Q 043369 86 HAVEFDPI--TRKVRP-LTI-QTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEE-DHQNGLIS-PRWYAS 159 (526)
Q Consensus 86 ~~~~yDp~--t~~w~~-~~~-~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~-~~~~~m~~-~R~y~s 159 (526)
...+||.. +++... +.. .+...+......++|+.+++|+.. ..+..||.. +..... . ...+.. ...-.+
T Consensus 126 ~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~---g~v~~~~~~-~~~~~~~~-~~~~~~h~~~v~~ 200 (450)
T 2vdu_B 126 SLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKF---GDVYSIDIN-SIPEEKFT-QEPILGHVSMLTD 200 (450)
T ss_dssp EEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT---SEEEEEETT-SCCCSSCC-CCCSEECSSCEEE
T ss_pred eEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCC---CcEEEEecC-Cccccccc-ceeeecccCceEE
Confidence 36778877 544332 221 112223334566799999998762 357788765 433221 1 011211 112234
Q ss_pred eEEecC---CcEEEEcCccCCeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEccc--eE
Q 043369 160 NQILPN---GKIIVVGGRFQFTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDR--AI 233 (526)
Q Consensus 160 ~~~L~d---G~v~viGG~~~~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~~--~~ 233 (526)
++.-+| |+.++.|+.+. .+.+| ..+. .... .++.... ..... +... ||++++.|+.+ ..
T Consensus 201 ~~~sp~~~~~~~l~s~~~d~-~i~vwd~~~~-----~~~~-~~~~~h~------~~v~~-~~~s-d~~~l~s~~~d~~v~ 265 (450)
T 2vdu_B 201 VHLIKDSDGHQFIITSDRDE-HIKISHYPQC-----FIVD-KWLFGHK------HFVSS-ICCG-KDYLLLSAGGDDKIF 265 (450)
T ss_dssp EEEEECTTSCEEEEEEETTS-CEEEEEESCT-----TCEE-EECCCCS------SCEEE-EEEC-STTEEEEEESSSEEE
T ss_pred EEEcCCCCCCcEEEEEcCCC-cEEEEECCCC-----ceee-eeecCCC------CceEE-EEEC-CCCEEEEEeCCCeEE
Confidence 455567 88888888764 56677 4433 1110 0010000 01111 1223 89999888754 67
Q ss_pred EEeccCCeEEEec
Q 043369 234 LLDYVNNRVMKNY 246 (526)
Q Consensus 234 ~yDp~t~~w~~~~ 246 (526)
+||..+++..+.+
T Consensus 266 vwd~~~~~~~~~~ 278 (450)
T 2vdu_B 266 AWDWKTGKNLSTF 278 (450)
T ss_dssp EEETTTCCEEEEE
T ss_pred EEECCCCcEeeee
Confidence 8999887755333
No 174
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=89.60 E-value=3.2 Score=41.35 Aligned_cols=143 Identities=13% Similarity=0.076 Sum_probs=74.4
Q ss_pred eEEEEeCCCCcEEeCc-cCC-ccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCc-ccccCCCCCcccccceeEE
Q 043369 86 HAVEFDPITRKVRPLT-IQT-DTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDW-EEDHQNGLISPRWYASNQI 162 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~-~~~-~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W-~~~~~~~m~~~R~y~s~~~ 162 (526)
...+||+.+++....- ..+ ..........+||+++++|........+.+||.. +..- ... ..+.....-.+.+.
T Consensus 199 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~-~~~~~~~~--~~~~~~~~v~~~~~ 275 (402)
T 2aq5_A 199 RVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTK-HLEEPLSL--QELDTSSGVLLPFF 275 (402)
T ss_dssp EEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETT-BCSSCSEE--EECCCCSSCEEEEE
T ss_pred cEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCc-cccCCceE--EeccCCCceeEEEE
Confidence 5778999887654322 222 2223334566899999998321123689999987 4321 111 11222233334455
Q ss_pred ecCCcEEEEcCccCCeEEEE-cCCCCCCCcc-eeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEccceEEEeccCC
Q 043369 163 LPNGKIIVVGGRFQFTYEFI-PRTSDSDRKI-LYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDRAILLDYVNN 240 (526)
Q Consensus 163 L~dG~v~viGG~~~~~~E~y-P~~~~~~~~~-w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~~~~~yDp~t~ 240 (526)
-+||+.+++.|.....+.+| ..+.. . ...+..... . .... .+...++|++.+.++....+|+..++
T Consensus 276 s~~~~~l~~~g~~dg~i~i~d~~~~~----~~~~~l~~~~~--~-----~~v~-~~~~sp~~~~~~s~~~~~~~~~l~~~ 343 (402)
T 2aq5_A 276 DPDTNIVYLCGKGDSSIRYFEITSEA----PFLHYLSMFSS--K-----ESQR-GMGYMPKRGLEVNKCEIARFYKLHER 343 (402)
T ss_dssp ETTTTEEEEEETTCSCEEEEEECSST----TCEEEEEEECC--S-----SCCS-EEEECCGGGSCGGGTEEEEEEEEETT
T ss_pred cCCCCEEEEEEcCCCeEEEEEecCCC----cceEeeccccc--C-----Cccc-ceEEecccccceecceeEEEEEcCCC
Confidence 56888776555433456777 44331 1 112211110 0 0111 23345677776655556778888887
Q ss_pred eEE
Q 043369 241 RVM 243 (526)
Q Consensus 241 ~w~ 243 (526)
+..
T Consensus 344 ~~~ 346 (402)
T 2aq5_A 344 KCE 346 (402)
T ss_dssp EEE
T ss_pred cEE
Confidence 654
No 175
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=89.50 E-value=15 Score=35.19 Aligned_cols=161 Identities=11% Similarity=0.018 Sum_probs=87.2
Q ss_pred eEEEEecCCeEEEEecccCCCCCccCCCCccccCccccCCCCcceEEEEeCCCCcEEeC-ccCCccccccceEcCCCcEE
Q 043369 42 MHMALLPNDRIIAFDRSHFGPSNITLPQGKCIKGVELETSDCYAHAVEFDPITRKVRPL-TIQTDTWCSSGALLANGVLV 120 (526)
Q Consensus 42 ~~~a~l~~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~yDp~t~~w~~~-~~~~~~fc~~~~~l~~G~l~ 120 (526)
..+++-++|++|+-.+.. | ......+|++|++.... +.....|.. +.++.++++|
T Consensus 24 ~Gl~~~~dg~Lyvstg~~----------~-------------~s~v~~iD~~tg~v~~~i~l~~~~fge-Gi~~~g~~ly 79 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLY----------G-------------RSSVRQVALQTGKVENIHKMDDSYFGE-GLTLLNEKLY 79 (266)
T ss_dssp EEEEECSTTEEEEEECST----------T-------------TCEEEEEETTTCCEEEEEECCTTCCEE-EEEEETTEEE
T ss_pred ccEEEeCCCeEEEECCCC----------C-------------CCEEEEEECCCCCEEEEEecCCCcceE-EEEEeCCEEE
Confidence 455555678888765531 1 12577899999987653 233344544 3444567898
Q ss_pred EEcCCCCCccEEEEEcCCCCCCcc-cccCCCCCcccccceeEEecCCcEEEEcCccCCeEEEE-cCCCCCCCcceeecCC
Q 043369 121 QTGGYRLGERVVRYLKPCSDCDWE-EDHQNGLISPRWYASNQILPNGKIIVVGGRFQFTYEFI-PRTSDSDRKILYQLPF 198 (526)
Q Consensus 121 v~GG~~~g~~~v~~ydp~~t~~W~-~~~~~~m~~~R~y~s~~~L~dG~v~viGG~~~~~~E~y-P~~~~~~~~~w~~~p~ 198 (526)
++.-. ...+.+||+. +.+=. +.+ ..++. .| + .+-.++++|+.-|. ..+.++ |.+.. .-..++.
T Consensus 80 v~t~~---~~~v~viD~~-t~~v~~~i~-~g~~~-g~--g-lt~Dg~~l~vs~gs--~~l~viD~~t~~----v~~~I~V 144 (266)
T 2iwa_A 80 QVVWL---KNIGFIYDRR-TLSNIKNFT-HQMKD-GW--G-LATDGKILYGSDGT--SILYEIDPHTFK----LIKKHNV 144 (266)
T ss_dssp EEETT---CSEEEEEETT-TTEEEEEEE-CCSSS-CC--E-EEECSSSEEEECSS--SEEEEECTTTCC----EEEEEEC
T ss_pred EEEec---CCEEEEEECC-CCcEEEEEE-CCCCC-eE--E-EEECCCEEEEECCC--CeEEEEECCCCc----EEEEEEE
Confidence 88643 3689999987 54322 121 11221 22 2 22324678887653 355566 76541 1112221
Q ss_pred ccccCCCCCCCCCCcceEEEecCCcEEEEEc--cceEEEeccCCeEEEecc
Q 043369 199 LKETMHSPKIPNNLYPFLHLSTDGNLFIFAN--DRAILLDYVNNRVMKNYP 247 (526)
Q Consensus 199 l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg--~~~~~yDp~t~~w~~~~p 247 (526)
-..... -.+|......||+||+.-- ....+.|+++++....++
T Consensus 145 g~~~~p------~~~~nele~~dg~lyvn~~~~~~V~vID~~tg~V~~~I~ 189 (266)
T 2iwa_A 145 KYNGHR------VIRLNELEYINGEVWANIWQTDCIARISAKDGTLLGWIL 189 (266)
T ss_dssp EETTEE------CCCEEEEEEETTEEEEEETTSSEEEEEETTTCCEEEEEE
T ss_pred CCCCcc------cccceeEEEECCEEEEecCCCCeEEEEECCCCcEEEEEE
Confidence 100000 0122333344899997643 457889999998765553
No 176
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=89.33 E-value=12 Score=39.44 Aligned_cols=50 Identities=10% Similarity=0.172 Sum_probs=30.4
Q ss_pred EeCCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCcEeecCCCCccccccccceecCCCEEEEecCCC
Q 043369 344 LLPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINRFRILSPSLIPRLYHSTAHLLSDGRVLVGGSNP 414 (526)
Q Consensus 344 vLpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~Wt~~a~~~~~R~yhs~a~LlpdG~V~v~GG~~ 414 (526)
.-|||++++.+..+ + +..+|+. .+.... .. ...++.+.- ||++++.++..
T Consensus 253 ~spdg~~~~~~~~~-g------------~~~l~~~--g~~~~~---~~-~~v~~~~~s--dg~~l~~~s~~ 302 (582)
T 3o4h_A 253 YLPDGRLAVVARRE-G------------RSAVFID--GERVEA---PQ-GNHGRVVLW--RGKLVTSHTSL 302 (582)
T ss_dssp ECTTSCEEEEEEET-T------------EEEEEET--TEEECC---CS-SEEEEEEEE--TTEEEEEEEET
T ss_pred EcCCCcEEEEEEcC-C------------cEEEEEE--CCeecc---CC-CceEEEEec--CCEEEEEEcCC
Confidence 56999998887643 1 4678887 544331 11 222344433 99998887754
No 177
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=88.57 E-value=11 Score=40.92 Aligned_cols=65 Identities=18% Similarity=0.262 Sum_probs=37.6
Q ss_pred ceEEeCCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCcEeecCCCCccc-c-ccccceecCCCEEEEecCCC
Q 043369 341 DMILLPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINRFRILSPSLIPR-L-YHSTAHLLSDGRVLVGGSNP 414 (526)
Q Consensus 341 ~~vvLpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~Wt~~a~~~~~R-~-yhs~a~LlpdG~V~v~GG~~ 414 (526)
.... |||+.+++...+.+ .....+.+||+.+.+.+.+....... . ........|||++++.++..
T Consensus 291 ~~~~-pDg~~l~~~~~~~~--------~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~ 357 (741)
T 2ecf_A 291 RVNW-RDPQHLSFQRQSRD--------QKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSERT 357 (741)
T ss_dssp EEEE-EETTEEEEEEEETT--------SSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEECTT
T ss_pred EEEe-CCCCEEEEEEeccc--------CCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEecCC
Confidence 3345 99998887654321 11236789999988765543221110 0 11234557999988777653
No 178
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=88.12 E-value=35 Score=37.58 Aligned_cols=253 Identities=12% Similarity=0.100 Sum_probs=123.2
Q ss_pred EEEEeCCCCcEEeCccCC--------ccccccceEcCCCc-EEEEcCCCCCccEEEEEcCCCCCCcccccC--CCCCccc
Q 043369 87 AVEFDPITRKVRPLTIQT--------DTWCSSGALLANGV-LVQTGGYRLGERVVRYLKPCSDCDWEEDHQ--NGLISPR 155 (526)
Q Consensus 87 ~~~yDp~t~~w~~~~~~~--------~~fc~~~~~l~~G~-l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~--~~m~~~R 155 (526)
...||+.+++++...... .....+.....+|+ |++ |... ..+.+||+. +.++..... ..+...+
T Consensus 379 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWi-gt~~---~Gl~~~d~~-~~~~~~~~~~~~~l~~~~ 453 (795)
T 4a2l_A 379 LNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYI-GTHA---GGLSILHRN-SGQVENFNQRNSQLVNEN 453 (795)
T ss_dssp EEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEE-EETT---TEEEEEETT-TCCEEEECTTTSCCSCSC
T ss_pred eEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEE-EeCc---CceeEEeCC-CCcEEEeecCCCCcCCCe
Confidence 566888888887654211 11111122335788 665 4332 357889998 777665410 0122222
Q ss_pred ccceeEEecCCcEEEEcCccCCeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEccceEE
Q 043369 156 WYASNQILPNGKIIVVGGRFQFTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDRAIL 234 (526)
Q Consensus 156 ~y~s~~~L~dG~v~viGG~~~~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~~~~~ 234 (526)
-.+.+.-.+|++++... . ..-+| |.++ .+........... ...+.--....-.+|+|++.......+
T Consensus 454 -v~~i~~d~~g~lwigt~-~--Gl~~~~~~~~-----~~~~~~~~~~~~~---~~~~~i~~i~~d~~g~lWigt~~Gl~~ 521 (795)
T 4a2l_A 454 -VYAILPDGEGNLWLGTL-S--ALVRFNPEQR-----SFTTIEKEKDGTP---VVSKQITTLFRDSHKRLWIGGEEGLSV 521 (795)
T ss_dssp -EEEEEECSSSCEEEEES-S--CEEEEETTTT-----EEEECCBCTTCCB---CCCCCEEEEEECTTCCEEEEESSCEEE
T ss_pred -eEEEEECCCCCEEEEec-C--ceeEEeCCCC-----eEEEccccccccc---cCCceEEEEEECCCCCEEEEeCCceEE
Confidence 12334445688887543 2 35566 6655 4443321100000 000111112234578998866555788
Q ss_pred EeccCCeEEEeccCCCCCCCCccCCCCceeecccccccccccccCCCCCccCcEEEEEcCCCCCCCchhhhhhccccccc
Q 043369 235 LDYVNNRVMKNYPVMPGGISRNYPSTGSSVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAK 314 (526)
Q Consensus 235 yDp~t~~w~~~~p~~p~~~~r~y~~~g~~v~lp~~~~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~ 314 (526)
||+.++++ + +...+.. ...+......++. ..+|+|++....
T Consensus 522 ~~~~~~~~-~-~~~~~~~--~~l~~~~i~~i~~----------------d~~g~lWigT~~------------------- 562 (795)
T 4a2l_A 522 FKQEGLDI-Q-KASILPV--SNVTKLFTNCIYE----------------ASNGIIWVGTRE------------------- 562 (795)
T ss_dssp EEEETTEE-E-ECCCSCS--CGGGGSCEEEEEE----------------CTTSCEEEEESS-------------------
T ss_pred EeCCCCeE-E-EecCCCC--CCCCCCeeEEEEE----------------CCCCCEEEEeCC-------------------
Confidence 99998887 3 2210000 0000001111110 126777764321
Q ss_pred ceEEEEeecCCCCcee---c-ccCccccccceEEeCCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCcEeecCC--
Q 043369 315 SCGRLTITAQNPKWEM---E-EMPLNRVMGDMILLPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINRFRILSP-- 388 (526)
Q Consensus 315 s~~~~d~~~~~~~W~~---~-~M~~~R~~~~~vvLpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~Wt~~a~-- 388 (526)
-..+||+. +.+++. . .++..... +.+.-.+|+|++... .| +.+|||++.+++....
T Consensus 563 Gl~~~d~~--~~~~~~~~~~~gl~~~~i~-~i~~d~~g~lWi~t~--~G-------------l~~~~~~~~~~~~~~~~d 624 (795)
T 4a2l_A 563 GFYCFNEK--DKQIKRYNTTNGLPNNVVY-GILEDSFGRLWLSTN--RG-------------ISCFNPETEKFRNFTESD 624 (795)
T ss_dssp CEEEEETT--TTEEEEECGGGTCSCSCEE-EEEECTTSCEEEEET--TE-------------EEEEETTTTEEEEECGGG
T ss_pred CceeECCC--CCcEEEeCCCCCCchhheE-EEEECCCCCEEEEcC--Cc-------------eEEEcCCCCcEEEcCCcC
Confidence 13356653 244432 1 34433322 223335789988653 12 4689999998875432
Q ss_pred -CCccccccccceecCCCEEEEecCC
Q 043369 389 -SLIPRLYHSTAHLLSDGRVLVGGSN 413 (526)
Q Consensus 389 -~~~~R~yhs~a~LlpdG~V~v~GG~ 413 (526)
++.......+++..+||++|++|.+
T Consensus 625 Gl~~~~f~~~~~~~~~~G~l~~g~~~ 650 (795)
T 4a2l_A 625 GLQSNQFNTASYCRTSVGQMYFGGIN 650 (795)
T ss_dssp TCSCSCEEEEEEEECTTSCEEEEETT
T ss_pred CCccccCccCceeECCCCeEEEecCC
Confidence 3222222234566789999998764
No 179
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=87.67 E-value=5.3 Score=37.99 Aligned_cols=118 Identities=14% Similarity=0.087 Sum_probs=68.2
Q ss_pred ccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEecCCcEEEEcCccCCeEEEE-c
Q 043369 105 DTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPNGKIIVVGGRFQFTYEFI-P 183 (526)
Q Consensus 105 ~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~dG~v~viGG~~~~~~E~y-P 183 (526)
..|.. +..+.++++|+..|. .|...++.+|+. +.+-... .+++..-...+.+.. ++++|++...+ ..+-+| +
T Consensus 20 ~~ftq-GL~~~~~~LyestG~-~g~S~v~~vD~~-tgkv~~~--~~l~~~~fgeGi~~~-~~~ly~ltw~~-~~v~v~D~ 92 (243)
T 3mbr_X 20 TAFTE-GLFYLRGHLYESTGE-TGRSSVRKVDLE-TGRILQR--AEVPPPYFGAGIVAW-RDRLIQLTWRN-HEGFVYDL 92 (243)
T ss_dssp TCCEE-EEEEETTEEEEEECC-TTSCEEEEEETT-TCCEEEE--EECCTTCCEEEEEEE-TTEEEEEESSS-SEEEEEET
T ss_pred ccccc-cEEEECCEEEEECCC-CCCceEEEEECC-CCCEEEE--EeCCCCcceeEEEEe-CCEEEEEEeeC-CEEEEEEC
Confidence 34544 344557899999886 456789999999 7765543 244433333444544 78999986544 345566 5
Q ss_pred CCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecC-CcEEEEEc-cceEEEeccCCeEEEec
Q 043369 184 RTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTD-GNLFIFAN-DRAILLDYVNNRVMKNY 246 (526)
Q Consensus 184 ~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~d-G~Iy~~Gg-~~~~~yDp~t~~w~~~~ 246 (526)
.+-. .-..++.- ..+.. +..| +++|+.-| .....+||.+.+..+.+
T Consensus 93 ~tl~----~~~ti~~~------------~~Gwg-lt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I 140 (243)
T 3mbr_X 93 ATLT----PRARFRYP------------GEGWA-LTSDDSHLYMSDGTAVIRKLDPDTLQQVGSI 140 (243)
T ss_dssp TTTE----EEEEEECS------------SCCCE-EEECSSCEEEECSSSEEEEECTTTCCEEEEE
T ss_pred CcCc----EEEEEeCC------------CCceE-EeeCCCEEEEECCCCeEEEEeCCCCeEEEEE
Confidence 5431 11122221 01222 2344 45666543 34678999998866544
No 180
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=86.87 E-value=17 Score=34.18 Aligned_cols=62 Identities=6% Similarity=-0.079 Sum_probs=32.0
Q ss_pred cEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCccc-ccceeEEecCCc-EEEEcCccCCeEEEE-cCCC
Q 043369 118 VLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPR-WYASNQILPNGK-IIVVGGRFQFTYEFI-PRTS 186 (526)
Q Consensus 118 ~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R-~y~s~~~L~dG~-v~viGG~~~~~~E~y-P~~~ 186 (526)
.++++++.. ..+.++|+. +.+-... -.+.... .-..++.-+||+ +|+.+. ....+.+| ..+.
T Consensus 2 ~~~v~~~~~---~~v~~~d~~-~~~~~~~--~~~~~~~~~~~~~~~s~dg~~l~v~~~-~~~~v~~~d~~~~ 66 (337)
T 1pby_B 2 DYILAPARP---DKLVVIDTE-KMAVDKV--ITIADAGPTPMVPMVAPGGRIAYATVN-KSESLVKIDLVTG 66 (337)
T ss_dssp EEEEEEETT---TEEEEEETT-TTEEEEE--EECTTCTTCCCCEEECTTSSEEEEEET-TTTEEEEEETTTC
T ss_pred cEEEEcCCC---CeEEEEECC-CCcEEEE--EEcCCCCCCccceEEcCCCCEEEEEeC-CCCeEEEEECCCC
Confidence 355665542 578999987 5543322 1122211 123455556885 555554 33456677 5443
No 181
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=85.85 E-value=21 Score=35.99 Aligned_cols=92 Identities=9% Similarity=-0.184 Sum_probs=50.2
Q ss_pred eEEEEeCCCCcEEeC-ccCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccC-C----CC--------
Q 043369 86 HAVEFDPITRKVRPL-TIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQ-N----GL-------- 151 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~-~~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~-~----~m-------- 151 (526)
...+||..+++.... ...+........+. ||+++++|+.. ..+.+||.. +.+....-. . .+
T Consensus 221 ~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d---~~v~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (450)
T 2vdu_B 221 HIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGD---DKIFAWDWK-TGKNLSTFDYNSLIKPYLNDQHLAP 295 (450)
T ss_dssp CEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESS---SEEEEEETT-TCCEEEEEECHHHHGGGCCTTSBC-
T ss_pred cEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCC---CeEEEEECC-CCcEeeeecchhhhhhhhhhccccc
Confidence 456788776654322 21222222223444 99999999863 578889877 544221100 0 00
Q ss_pred ---------CcccccceeEEecCCcEEEEcCccCCeEEEE
Q 043369 152 ---------ISPRWYASNQILPNGKIIVVGGRFQFTYEFI 182 (526)
Q Consensus 152 ---------~~~R~y~s~~~L~dG~v~viGG~~~~~~E~y 182 (526)
.....-..++..+||+.+++++.....+.+|
T Consensus 296 ~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw 335 (450)
T 2vdu_B 296 PRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIIL 335 (450)
T ss_dssp ---------CBCCCEEEEEECSSSSEEEEEETTCSEEEEE
T ss_pred ccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEE
Confidence 1112223455667888888887555567777
No 182
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=85.30 E-value=19 Score=34.18 Aligned_cols=144 Identities=10% Similarity=0.066 Sum_probs=73.7
Q ss_pred eEEEEeCCCCcEEeCccC----CccccccceEcCCCcEEEEc-CCC-------CCccEEEEEcCCCCCCcccccCCCCCc
Q 043369 86 HAVEFDPITRKVRPLTIQ----TDTWCSSGALLANGVLVQTG-GYR-------LGERVVRYLKPCSDCDWEEDHQNGLIS 153 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~----~~~fc~~~~~l~~G~l~v~G-G~~-------~g~~~v~~ydp~~t~~W~~~~~~~m~~ 153 (526)
....||+++++++.+... ...+....++.++|++|+.- +.. .....+..+|+. . +.... ...+..
T Consensus 74 ~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g-~~~~~-~~~~~~ 150 (297)
T 3g4e_A 74 KFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-H-HVKKY-FDQVDI 150 (297)
T ss_dssp EEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-S-CEEEE-EEEESB
T ss_pred eEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-C-CEEEE-eecccc
Confidence 356799999888765432 22334456677899988853 110 122467788875 3 22222 012222
Q ss_pred ccccceeEEecCCc-EEEEcCccCCeEEEE-c--CCCCCCCcceeecCCccccCCCCCCCCCCcceEEE-ecCCcEEEEE
Q 043369 154 PRWYASNQILPNGK-IIVVGGRFQFTYEFI-P--RTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHL-STDGNLFIFA 228 (526)
Q Consensus 154 ~R~y~s~~~L~dG~-v~viGG~~~~~~E~y-P--~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~-~~dG~Iy~~G 228 (526)
+ .+.+.-+||+ +|++... ...+..| . .+. .......+..... ..-+|.... -.+|+||+..
T Consensus 151 p---ngi~~spdg~~lyv~~~~-~~~i~~~~~d~~~G-----~~~~~~~~~~~~~-----~~~~p~g~~~d~~G~lwva~ 216 (297)
T 3g4e_A 151 S---NGLDWSLDHKIFYYIDSL-SYSVDAFDYDLQTG-----QISNRRSVYKLEK-----EEQIPDGMCIDAEGKLWVAC 216 (297)
T ss_dssp E---EEEEECTTSCEEEEEEGG-GTEEEEEEECTTTC-----CEEEEEEEEECCG-----GGCEEEEEEEBTTSCEEEEE
T ss_pred c---cceEEcCCCCEEEEecCC-CCcEEEEeccCCCC-----cccCcEEEEECCC-----CCCCCCeeEECCCCCEEEEE
Confidence 2 2455556886 5555433 3345555 2 332 1110000000000 011344433 3689999875
Q ss_pred c--cceEEEeccCCeEEEec
Q 043369 229 N--DRAILLDYVNNRVMKNY 246 (526)
Q Consensus 229 g--~~~~~yDp~t~~w~~~~ 246 (526)
. ....+||+++++....+
T Consensus 217 ~~~~~v~~~d~~tG~~~~~i 236 (297)
T 3g4e_A 217 YNGGRVIRLDPVTGKRLQTV 236 (297)
T ss_dssp ETTTEEEEECTTTCCEEEEE
T ss_pred cCCCEEEEEcCCCceEEEEE
Confidence 3 45889999987765433
No 183
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=84.65 E-value=40 Score=35.89 Aligned_cols=91 Identities=14% Similarity=0.048 Sum_probs=51.8
Q ss_pred eEEEEeCCCCcEEe-CccCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEec
Q 043369 86 HAVEFDPITRKVRP-LTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILP 164 (526)
Q Consensus 86 ~~~~yDp~t~~w~~-~~~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~ 164 (526)
.+.++|+.|++... ++...... +..+-+||+.+.+++. + ..+.+||+. ..+-... ..+.... .+....++
T Consensus 178 ~V~viD~~t~~v~~~i~~g~~p~--~v~~SpDGr~lyv~~~-d--g~V~viD~~-~~t~~~v--~~i~~G~-~P~~ia~s 248 (567)
T 1qks_A 178 QIALIDGSTYEIKTVLDTGYAVH--ISRLSASGRYLFVIGR-D--GKVNMIDLW-MKEPTTV--AEIKIGS-EARSIETS 248 (567)
T ss_dssp EEEEEETTTCCEEEEEECSSCEE--EEEECTTSCEEEEEET-T--SEEEEEETT-SSSCCEE--EEEECCS-EEEEEEEC
T ss_pred eEEEEECCCCeEEEEEeCCCCcc--ceEECCCCCEEEEEcC-C--CeEEEEECC-CCCCcEe--EEEecCC-CCceeEEc
Confidence 57889999987653 33322221 3456678876556553 2 479999984 2222222 2233222 23333444
Q ss_pred -----CCcEEEEcCccCCeEEEE-cCC
Q 043369 165 -----NGKIIVVGGRFQFTYEFI-PRT 185 (526)
Q Consensus 165 -----dG~v~viGG~~~~~~E~y-P~~ 185 (526)
||+.++++.....++.++ ..+
T Consensus 249 ~~~~pDGk~l~v~n~~~~~v~ViD~~t 275 (567)
T 1qks_A 249 KMEGWEDKYAIAGAYWPPQYVIMDGET 275 (567)
T ss_dssp CSTTCTTTEEEEEEEETTEEEEEETTT
T ss_pred cccCCCCCEEEEEEccCCeEEEEECCC
Confidence 898777777666667777 443
No 184
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=84.49 E-value=6.5 Score=38.13 Aligned_cols=100 Identities=10% Similarity=-0.036 Sum_probs=54.6
Q ss_pred CcEEEEEcCCCCCCCchhhhhhcccccccceEEEEeecCCCCceec-ccCccccc-cceEEeCCCcEEEEcCcCCCCCCc
Q 043369 286 HSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTITAQNPKWEME-EMPLNRVM-GDMILLPTGDVLIINGAAKGTAGW 363 (526)
Q Consensus 286 ~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~-~~~vvLpdG~V~vvGG~~~g~~g~ 363 (526)
+++.++.|+.+. ++..+|+......++.. .+...... .+...-|+|++++.|+.+ +
T Consensus 118 ~g~~las~s~D~-----------------~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D-~---- 175 (330)
T 2hes_X 118 DGYYLATCSRDK-----------------SVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYD-D---- 175 (330)
T ss_dssp TSCEEEEEETTS-----------------CEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETT-S----
T ss_pred CCCEEEEEeCCC-----------------EEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCC-C----
Confidence 678888887652 35567764322344432 22211111 122345899999998865 2
Q ss_pred cCCCCCccccEEEeCCCCcEeecCCCCccccccccceecCC--CEEEEecCCCC
Q 043369 364 GAAREPVLNPVIYCPKINRFRILSPSLIPRLYHSTAHLLSD--GRVLVGGSNPN 415 (526)
Q Consensus 364 ~~~~~~~~~~e~YDP~t~~Wt~~a~~~~~R~yhs~a~Llpd--G~V~v~GG~~~ 415 (526)
++.+||..+..|+.+..+.--...-......|+ +..++.|+...
T Consensus 176 --------~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~ 221 (330)
T 2hes_X 176 --------TVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDS 221 (330)
T ss_dssp --------CEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTS
T ss_pred --------eEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCC
Confidence 568899887777654433211111111234566 77778887543
No 185
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=84.06 E-value=24 Score=34.11 Aligned_cols=50 Identities=12% Similarity=0.026 Sum_probs=31.2
Q ss_pred eEEEEeCCCCcEEeCccCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCC
Q 043369 86 HAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPC 138 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~ 138 (526)
...+||..+++....-..+..........++|+.+++||.+ ..+++||..
T Consensus 99 ~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d---~~i~~wd~~ 148 (343)
T 2xzm_R 99 TLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAE---REIKLWNIL 148 (343)
T ss_dssp EEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETT---SCEEEEESS
T ss_pred cEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCC---CEEEEEecc
Confidence 46789988876433212222222224456799999998863 568888875
No 186
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=83.43 E-value=36 Score=34.46 Aligned_cols=55 Identities=15% Similarity=0.092 Sum_probs=32.5
Q ss_pred eEEEEeCCCCcEEe-CccCC------ccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCC
Q 043369 86 HAVEFDPITRKVRP-LTIQT------DTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCD 142 (526)
Q Consensus 86 ~~~~yDp~t~~w~~-~~~~~------~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~ 142 (526)
.+.+||+.|.+... ++... .....+.++.+||+.+.+.-. .....+.+.|.. +.+
T Consensus 110 ~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~-~~~~~VsVID~~-t~~ 171 (386)
T 3sjl_D 110 YVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQF-SPAPAVGVVDLE-GKA 171 (386)
T ss_dssp EEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEEC-SSSCEEEEEETT-TTE
T ss_pred EEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEc-CCCCeEEEEECC-CCc
Confidence 57889999988643 33221 123444567788875444321 113578889987 543
No 187
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=82.58 E-value=35 Score=32.78 Aligned_cols=138 Identities=10% Similarity=-0.043 Sum_probs=72.3
Q ss_pred EEEEeCCCCcEEeCccCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEecCC
Q 043369 87 AVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPNG 166 (526)
Q Consensus 87 ~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~dG 166 (526)
...+|++|++...--.....|.. +..+.+++||++... .+.+.+||+. +.+-... .+.+--..+.+ -.++
T Consensus 77 v~~iD~~Tgkv~~~~l~~~~Fge-Git~~g~~Ly~ltw~---~~~v~V~D~~-Tl~~~~t----i~~~~eGwGLt-~Dg~ 146 (268)
T 3nok_A 77 LRQLSLESAQPVWMERLGNIFAE-GLASDGERLYQLTWT---EGLLFTWSGM-PPQRERT----TRYSGEGWGLC-YWNG 146 (268)
T ss_dssp EEECCSSCSSCSEEEECTTCCEE-EEEECSSCEEEEESS---SCEEEEEETT-TTEEEEE----EECSSCCCCEE-EETT
T ss_pred EEEEECCCCcEEeEECCCCccee-EEEEeCCEEEEEEcc---CCEEEEEECC-cCcEEEE----EeCCCceeEEe-cCCC
Confidence 67789999886443233344544 355567899998643 3689999998 5433221 22111112333 2245
Q ss_pred cEEEEcCccCCeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEE--ccceEEEeccCCeEE
Q 043369 167 KIIVVGGRFQFTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFA--NDRAILLDYVNNRVM 243 (526)
Q Consensus 167 ~v~viGG~~~~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~G--g~~~~~yDp~t~~w~ 243 (526)
++|+.-|. ..+.++ |.+.. .-..++.-..-.. . .+.--....+|+||+-- .+...+.||++++..
T Consensus 147 ~L~vSdGs--~~l~~iDp~T~~----v~~~I~V~~~g~~-----v-~~lNeLe~~dG~lyanvw~s~~I~vIDp~TG~V~ 214 (268)
T 3nok_A 147 KLVRSDGG--TMLTFHEPDGFA----LVGAVQVKLRGQP-----V-ELINELECANGVIYANIWHSSDVLEIDPATGTVV 214 (268)
T ss_dssp EEEEECSS--SEEEEECTTTCC----EEEEEECEETTEE-----C-CCEEEEEEETTEEEEEETTCSEEEEECTTTCBEE
T ss_pred EEEEECCC--CEEEEEcCCCCe----EEEEEEeCCCCcc-----c-ccccccEEeCCEEEEEECCCCeEEEEeCCCCcEE
Confidence 66766653 345566 76641 1112221100000 0 01111223499999653 235678999999876
Q ss_pred Eec
Q 043369 244 KNY 246 (526)
Q Consensus 244 ~~~ 246 (526)
..+
T Consensus 215 ~~I 217 (268)
T 3nok_A 215 GVI 217 (268)
T ss_dssp EEE
T ss_pred EEE
Confidence 544
No 188
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=82.46 E-value=29 Score=31.58 Aligned_cols=90 Identities=9% Similarity=-0.102 Sum_probs=44.9
Q ss_pred eEEEEeCCCCcEEeCccCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEecC
Q 043369 86 HAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPN 165 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~d 165 (526)
....+|..+++.+.+..... .......+||+.+++.+..++...+..+|.. +...... ... ...-...+.-+|
T Consensus 111 ~l~~~~~~~~~~~~~~~~~~--~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~-~~~~~~~--~~~--~~~~~~~~~s~d 183 (297)
T 2ojh_A 111 AIYLLPSTGGTPRLMTKNLP--SYWHGWSPDGKSFTYCGIRDQVFDIYSMDID-SGVETRL--THG--EGRNDGPDYSPD 183 (297)
T ss_dssp EEEEEETTCCCCEECCSSSS--EEEEEECTTSSEEEEEEEETTEEEEEEEETT-TCCEEEC--CCS--SSCEEEEEECTT
T ss_pred eEEEEECCCCceEEeecCCC--ccceEECCCCCEEEEEECCCCceEEEEEECC-CCcceEc--ccC--CCccccceECCC
Confidence 44556666666665543332 2223566788866643322333345555565 5544443 111 122233444568
Q ss_pred CcEEEEcCccCCeEEEE
Q 043369 166 GKIIVVGGRFQFTYEFI 182 (526)
Q Consensus 166 G~v~viGG~~~~~~E~y 182 (526)
|+.+++++.......+|
T Consensus 184 g~~l~~~~~~~~~~~i~ 200 (297)
T 2ojh_A 184 GRWIYFNSSRTGQMQIW 200 (297)
T ss_dssp SSEEEEEECTTSSCEEE
T ss_pred CCEEEEEecCCCCccEE
Confidence 88666655433344555
No 189
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=79.66 E-value=41 Score=31.87 Aligned_cols=137 Identities=14% Similarity=0.062 Sum_probs=71.9
Q ss_pred eEEEEeCCCCcEEeCccCC----ccccccceEcCCCcEEEE----cCCC----------CCccEEEEEcCCCCCCccccc
Q 043369 86 HAVEFDPITRKVRPLTIQT----DTWCSSGALLANGVLVQT----GGYR----------LGERVVRYLKPCSDCDWEEDH 147 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~~----~~fc~~~~~l~~G~l~v~----GG~~----------~g~~~v~~ydp~~t~~W~~~~ 147 (526)
....||+. ++.+.+.... .......++.++|+++++ |-.. .+...+.+|||. +.++...
T Consensus 108 ~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~-~g~~~~~- 184 (305)
T 3dr2_A 108 AITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPD-GSPLQRM- 184 (305)
T ss_dssp EEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSS-SCCCEEE-
T ss_pred EEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCC-CCcEEEE-
Confidence 45678875 6666553211 112334566779999996 4321 113578899997 7777655
Q ss_pred CCCCCcccccceeEEecCCc-EEEEcCcc----CCeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcce-EEEec
Q 043369 148 QNGLISPRWYASNQILPNGK-IIVVGGRF----QFTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPF-LHLST 220 (526)
Q Consensus 148 ~~~m~~~R~y~s~~~L~dG~-v~viGG~~----~~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~-~~~~~ 220 (526)
..+..+ .+.+.-+||+ +|+..-.. ...+..| ...+ ........... . ..+|. ...-.
T Consensus 185 -~~~~~p---~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~-----~l~~~~~~~~~-~------~~~pdgi~~d~ 248 (305)
T 3dr2_A 185 -ADLDHP---NGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDG-----ALHDRRHFASV-P------DGLPDGFCVDR 248 (305)
T ss_dssp -EEESSE---EEEEECTTSSEEEEEECCC---CCCEEEEEEEETT-----EEEEEEEEECC-S------SSCCCSEEECT
T ss_pred -ecCCCC---cceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCC-----CccCCeEEEEC-C------CCCCCeEEECC
Confidence 222212 2455556887 66654321 1345556 3322 11100000000 0 01122 23456
Q ss_pred CCcEEEEEccceEEEeccCCe
Q 043369 221 DGNLFIFANDRAILLDYVNNR 241 (526)
Q Consensus 221 dG~Iy~~Gg~~~~~yDp~t~~ 241 (526)
+|+||+..+....+||+....
T Consensus 249 ~G~lwv~~~~gv~~~~~~g~~ 269 (305)
T 3dr2_A 249 GGWLWSSSGTGVCVFDSDGQL 269 (305)
T ss_dssp TSCEEECCSSEEEEECTTSCE
T ss_pred CCCEEEecCCcEEEECCCCCE
Confidence 899988776668899997554
No 190
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=77.49 E-value=31 Score=34.28 Aligned_cols=89 Identities=12% Similarity=0.032 Sum_probs=49.9
Q ss_pred ccceEEEEee---cCCCCceec--ccCcc-------c--cccceEEeCCCcEEEEcCcCCCCCCccCCCCCccccEEEeC
Q 043369 313 AKSCGRLTIT---AQNPKWEME--EMPLN-------R--VMGDMILLPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCP 378 (526)
Q Consensus 313 ~~s~~~~d~~---~~~~~W~~~--~M~~~-------R--~~~~~vvLpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP 378 (526)
.+.+.+||+. .....|... ..... + ..-++++=++|.+||.+-... ..+.++||
T Consensus 99 ~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~------------~~I~rV~p 166 (334)
T 2p9w_A 99 ASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGM------------PAIARVSA 166 (334)
T ss_dssp CCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESS------------CEEEEECT
T ss_pred CCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCC------------CeEEEEeC
Confidence 4567899986 334566642 21111 1 244667778999999865320 14677888
Q ss_pred CCC---cEeecCCCCccccccccceecCCCEEEEecCC
Q 043369 379 KIN---RFRILSPSLIPRLYHSTAHLLSDGRVLVGGSN 413 (526)
Q Consensus 379 ~t~---~Wt~~a~~~~~R~yhs~a~LlpdG~V~v~GG~ 413 (526)
+.. .|-.-.+....|..-.-.+..|||+.|++-..
T Consensus 167 dG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~ 204 (334)
T 2p9w_A 167 DGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG 204 (334)
T ss_dssp TSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS
T ss_pred CCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC
Confidence 755 25332222233433333456789966665443
No 191
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=74.66 E-value=54 Score=30.34 Aligned_cols=88 Identities=10% Similarity=0.033 Sum_probs=46.3
Q ss_pred eEEEEeCCCCcEEeCccCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEecC
Q 043369 86 HAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPN 165 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~d 165 (526)
...+||..+++.......+...+. ....++.+++.|+.. ..+..++.. +...... ................+
T Consensus 90 ~v~iw~~~~~~~~~~~~~h~~~~~--~~~~~~~~l~s~~~~---~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~ 161 (318)
T 4ggc_A 90 EVQLWDVQQQKRLRNMTSHSARVG--SLSWNSYILSSGSRS---GHIHHHDVR-VAEHHVA--TLSGHSQEVCGLRWAPD 161 (318)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEE--EEEEETTEEEEEETT---SEEEEEETT-SSSCEEE--EEECCSSCEEEEEECTT
T ss_pred cEEEeecCCceeEEEecCccceEE--EeecCCCEEEEEecC---CceEeeecC-CCceeEE--EEcCccCceEEEEEcCC
Confidence 567889888765433222322222 234567888888763 345555554 3222111 00111222234445568
Q ss_pred CcEEEEcCccCCeEEEE
Q 043369 166 GKIIVVGGRFQFTYEFI 182 (526)
Q Consensus 166 G~v~viGG~~~~~~E~y 182 (526)
|+.++.|+.++ .+.+|
T Consensus 162 ~~~l~s~~~d~-~i~iw 177 (318)
T 4ggc_A 162 GRHLASGGNDN-LVNVW 177 (318)
T ss_dssp SSEEEEEETTS-CEEEE
T ss_pred CCEEEEEecCc-ceeEE
Confidence 88888887664 46666
No 192
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=74.57 E-value=65 Score=31.22 Aligned_cols=64 Identities=5% Similarity=-0.052 Sum_probs=33.1
Q ss_pred ceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEecCCcEE-EEcCccCCeEEEE-cCC
Q 043369 111 GALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPNGKII-VVGGRFQFTYEFI-PRT 185 (526)
Q Consensus 111 ~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~dG~v~-viGG~~~~~~E~y-P~~ 185 (526)
.++-+||+++++|+. +.+++||.. +.+-... .... . ......+.++..+ ++||.+ .++.+| ..+
T Consensus 25 v~fs~dg~~la~g~~----~~~~iw~~~-~~~~~~~--~~~~--~-~~~~~~~~~~~~~~~~~~~d-~~v~iWd~~~ 90 (355)
T 3vu4_A 25 YEFNQDQSCLILSTL----KSFEIYNVH-PVAHIMS--QEMR--H-LSKVRMLHRTNYVAFVTGVK-EVVHIWDDVK 90 (355)
T ss_dssp EEECTTSSEEEEECS----SEEEEEEET-TEEEEEE--EECS--C-CCEEEECTTSSEEEEECSST-TEEEEEETTT
T ss_pred EEECCCCCEEEEEcC----CEEEEEecC-Ccceeee--eecC--C-eEEEEEcCCCCEEEEEECCc-cEEEEEECCC
Confidence 345679999999875 246788754 3221111 0111 1 2233444455555 556654 366666 443
No 193
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=74.32 E-value=94 Score=32.97 Aligned_cols=107 Identities=10% Similarity=-0.006 Sum_probs=58.7
Q ss_pred CCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEecCCcEEEEcCccCCeEEEE-cC--CCCCCCcc
Q 043369 116 NGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPNGKIIVVGGRFQFTYEFI-PR--TSDSDRKI 192 (526)
Q Consensus 116 ~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~dG~v~viGG~~~~~~E~y-P~--~~~~~~~~ 192 (526)
++.+|++... ...+.++|+. +.+-.. .+.....-+.++.-+||+.+.+++.+ ..+.+| .. +.. .
T Consensus 166 ~~~~~V~~~~---~~~V~viD~~-t~~v~~----~i~~g~~p~~v~~SpDGr~lyv~~~d-g~V~viD~~~~t~~----~ 232 (567)
T 1qks_A 166 ENLFSVTLRD---AGQIALIDGS-TYEIKT----VLDTGYAVHISRLSASGRYLFVIGRD-GKVNMIDLWMKEPT----T 232 (567)
T ss_dssp GGEEEEEETT---TTEEEEEETT-TCCEEE----EEECSSCEEEEEECTTSCEEEEEETT-SEEEEEETTSSSCC----E
T ss_pred CceEEEEeCC---CCeEEEEECC-CCeEEE----EEeCCCCccceEECCCCCEEEEEcCC-CeEEEEECCCCCCc----E
Confidence 4567777643 3689999988 654332 22333323456666788755555543 356666 53 220 1
Q ss_pred eeecCCccccCCCCCCCCCCcceEEE-e----cCCcEEEEEc---cceEEEeccCCeEEEecc
Q 043369 193 LYQLPFLKETMHSPKIPNNLYPFLHL-S----TDGNLFIFAN---DRAILLDYVNNRVMKNYP 247 (526)
Q Consensus 193 w~~~p~l~~~~~~~~~~~~~yp~~~~-~----~dG~Iy~~Gg---~~~~~yDp~t~~w~~~~p 247 (526)
-..++. ...|+... . +||+..++++ ....++|..+.+-.+.++
T Consensus 233 v~~i~~------------G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~ 283 (567)
T 1qks_A 233 VAEIKI------------GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQS 283 (567)
T ss_dssp EEEEEC------------CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEE
T ss_pred eEEEec------------CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEe
Confidence 111111 12344433 3 4898766665 346789998887654444
No 194
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=73.89 E-value=77 Score=31.79 Aligned_cols=115 Identities=13% Similarity=0.109 Sum_probs=63.2
Q ss_pred ceeEEEEecCCeEEEEecccCCCCCccCCCCccccCccccCCCCcceEEEEeCCCCcEEeCccCCccccccceEcCCCcE
Q 043369 40 SAMHMALLPNDRIIAFDRSHFGPSNITLPQGKCIKGVELETSDCYAHAVEFDPITRKVRPLTIQTDTWCSSGALLANGVL 119 (526)
Q Consensus 40 ~~~~~a~l~~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l 119 (526)
.+..+++-++|++|+.+..+ .....||+.+++.+.+......-| .++.++|+.
T Consensus 132 ~P~~la~d~~g~lyv~d~~~-------------------------~~I~~id~~~g~~~~~~~~~~~~~--ia~~~~g~~ 184 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDD-------------------------PRVRLISVDDNKVTTVHPGFKGGK--PAVTKDKQR 184 (409)
T ss_dssp CEEEEEECSTTEEEEEETTT-------------------------TEEEEEETTTTEEEEEEETCCBCB--CEECTTSSE
T ss_pred CceEEEEeCCCCEEEEecCC-------------------------CcEEEEECCCCEEEEeeccCCCCc--eeEecCCCc
Confidence 45666666788988887532 136679998887776543322222 556677765
Q ss_pred EEEcCCCCCccEEEEEcCCCCCCcccccCCCC-C-cccccceeEEec-CCcEEEEcCccCCeEEEE-cCCC
Q 043369 120 VQTGGYRLGERVVRYLKPCSDCDWEEDHQNGL-I-SPRWYASNQILP-NGKIIVVGGRFQFTYEFI-PRTS 186 (526)
Q Consensus 120 ~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m-~-~~R~y~s~~~L~-dG~v~viGG~~~~~~E~y-P~~~ 186 (526)
+.+.... +...+..||+. + .|.......+ . ...+-.+++.-+ +|++|+.-. ...+..| +.+.
T Consensus 185 l~~~d~~-~~~~I~~~d~~-~-~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~--~~~I~~~d~~~~ 250 (409)
T 3hrp_A 185 VYSIGWE-GTHTVYVYMKA-S-GWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDS--NKNFGRFNVKTQ 250 (409)
T ss_dssp EEEEBSS-TTCEEEEEEGG-G-TTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECT--TCEEEEEETTTC
T ss_pred EEEEecC-CCceEEEEEcC-C-CceeEEeeeccchhcCCcEEEEEeCCCCeEEEEEC--CCcEEEEECCCC
Confidence 5444331 22378899986 3 3431100000 1 122223455556 799999543 2345566 5543
No 195
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=72.47 E-value=53 Score=34.83 Aligned_cols=27 Identities=7% Similarity=0.197 Sum_probs=19.4
Q ss_pred EecCCcEEEEEc--cceEEEec-cCCe--EEE
Q 043369 218 LSTDGNLFIFAN--DRAILLDY-VNNR--VMK 244 (526)
Q Consensus 218 ~~~dG~Iy~~Gg--~~~~~yDp-~t~~--w~~ 244 (526)
++.+|+||+... .....+|. ++++ |..
T Consensus 59 ~v~~g~vyv~~~~~~~v~AlD~~~tG~~~W~~ 90 (571)
T 2ad6_A 59 LVIGDMMYVHSAFPNNTYALNLNDPGKIVWQH 90 (571)
T ss_dssp EEETTEEEEECSTTTCEEEEETTCTTSEEEEE
T ss_pred EEECCEEEEEeCCCCEEEEEeCCCCccEEEEE
Confidence 345999998876 35788999 7764 553
No 196
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=71.87 E-value=67 Score=30.19 Aligned_cols=59 Identities=8% Similarity=-0.041 Sum_probs=34.0
Q ss_pred CCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEecCCcEEEEcCccCCeEEEE-cCCC
Q 043369 116 NGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPNGKIIVVGGRFQFTYEFI-PRTS 186 (526)
Q Consensus 116 ~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~dG~v~viGG~~~~~~E~y-P~~~ 186 (526)
++++|++.-. ...+.+||+. +...... .+. ..-.+.+.-+||++++..+ ..+.+| +.++
T Consensus 24 ~~~l~~~d~~---~~~i~~~d~~-~~~~~~~---~~~--~~~~~i~~~~dG~l~v~~~---~~l~~~d~~~g 83 (297)
T 3g4e_A 24 SNSLLFVDIP---AKKVCRWDSF-TKQVQRV---TMD--APVSSVALRQSGGYVATIG---TKFCALNWKEQ 83 (297)
T ss_dssp TTEEEEEETT---TTEEEEEETT-TCCEEEE---ECS--SCEEEEEEBTTSSEEEEET---TEEEEEETTTT
T ss_pred CCEEEEEECC---CCEEEEEECC-CCcEEEE---eCC--CceEEEEECCCCCEEEEEC---CeEEEEECCCC
Confidence 4678887643 2578999998 6544332 111 1122455567899776542 345666 6554
No 197
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=71.68 E-value=31 Score=33.61 Aligned_cols=49 Identities=4% Similarity=-0.085 Sum_probs=31.9
Q ss_pred EEEEeCCCCcEEe-CccC-CccccccceEcCCCcEEEEcCCCCCccEEEEEcCC
Q 043369 87 AVEFDPITRKVRP-LTIQ-TDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPC 138 (526)
Q Consensus 87 ~~~yDp~t~~w~~-~~~~-~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~ 138 (526)
..+||..+++-.. +... +.......+.-+||+.+++|+.+ ..+++||..
T Consensus 220 v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d---~~v~iw~~~ 270 (355)
T 3vu4_A 220 IRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDK---WTLHVFEIF 270 (355)
T ss_dssp EEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETT---CEEEEEESS
T ss_pred EEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECC---CEEEEEEcc
Confidence 6789988776432 3211 33333335567799999999863 578888875
No 198
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=70.23 E-value=68 Score=31.54 Aligned_cols=124 Identities=6% Similarity=0.025 Sum_probs=63.9
Q ss_pred cceEcCCC-cEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCccc-------------ccceeEEecCCcEEEEcCcc
Q 043369 110 SGALLANG-VLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPR-------------WYASNQILPNGKIIVVGGRF 175 (526)
Q Consensus 110 ~~~~l~~G-~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R-------------~y~s~~~L~dG~v~viGG~~ 175 (526)
.....++| .++++|+.. ..+++||.. +.+-...+...+.... .-.+++.-+||+.++.|+.
T Consensus 231 ~~~~~p~~~~~l~s~~~d---g~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~- 305 (447)
T 3dw8_B 231 AAEFHPNSCNTFVYSSSK---GTIRLCDMR-ASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY- 305 (447)
T ss_dssp EEEECSSCTTEEEEEETT---SCEEEEETT-TCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-
T ss_pred EEEECCCCCcEEEEEeCC---CeEEEEECc-CCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-
Confidence 34556788 899999873 478999987 5443110000111111 2234555668999888876
Q ss_pred CCeEEEE-cCC-CCCCCcceeecCCccccCCC-CC--CCCCCcc--eEEEecCCcEEEEEccc--eEEEeccCCeEE
Q 043369 176 QFTYEFI-PRT-SDSDRKILYQLPFLKETMHS-PK--IPNNLYP--FLHLSTDGNLFIFANDR--AILLDYVNNRVM 243 (526)
Q Consensus 176 ~~~~E~y-P~~-~~~~~~~w~~~p~l~~~~~~-~~--~~~~~yp--~~~~~~dG~Iy~~Gg~~--~~~yDp~t~~w~ 243 (526)
..+.+| ... .. ....+..-...... .. .....+. .+...++|+.++.|+.+ ..+||..+++..
T Consensus 306 -~~v~iwd~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~ 377 (447)
T 3dw8_B 306 -LSVKVWDLNMENR----PVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDI 377 (447)
T ss_dssp -SEEEEEETTCCSS----CSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEE
T ss_pred -CeEEEEeCCCCcc----ccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcce
Confidence 678888 443 21 01111100000000 00 0000000 13456789988888754 678999987754
No 199
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=69.37 E-value=1.3e+02 Score=32.68 Aligned_cols=137 Identities=14% Similarity=0.020 Sum_probs=75.0
Q ss_pred EEEEeCCCCcEEeCccCC-----ccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCccccc-CCCCCccccccee
Q 043369 87 AVEFDPITRKVRPLTIQT-----DTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDH-QNGLISPRWYASN 160 (526)
Q Consensus 87 ~~~yDp~t~~w~~~~~~~-----~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~-~~~m~~~R~y~s~ 160 (526)
..+||+.+++|+...... ...........+|+|++..- . ..+.+||+. +.++.... ...++...- .+.
T Consensus 471 l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~---~Gl~~~~~~-~~~~~~~~~~~~l~~~~i-~~i 544 (781)
T 3v9f_A 471 VFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTF-G---GGVGIYTPD-MQLVRKFNQYEGFCSNTI-NQI 544 (781)
T ss_dssp EEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEES-S---SCEEEECTT-CCEEEEECTTTTCSCSCE-EEE
T ss_pred eEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEc-C---CCEEEEeCC-CCeEEEccCCCCCCCCee-EEE
Confidence 567899988887654221 22223334456788887532 1 236779998 77776541 012332221 233
Q ss_pred EEecCCcEEEEcCccCCeE-EEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEccceEEEecc
Q 043369 161 QILPNGKIIVVGGRFQFTY-EFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDRAILLDYV 238 (526)
Q Consensus 161 ~~L~dG~v~viGG~~~~~~-E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~~~~~yDp~ 238 (526)
..-.+|+|++... ... -.| |.++ ++........ .+.+..-....-.+|+|++.+.+...+|||+
T Consensus 545 ~~d~~g~lWi~T~---~Glv~~~d~~~~-----~~~~~~~~~g------l~~~~i~~i~~d~~g~lW~~t~~Gl~~~~~~ 610 (781)
T 3v9f_A 545 YRSSKGQMWLATG---EGLVCFPSARNF-----DYQVFQRKEG------LPNTHIRAISEDKNGNIWASTNTGISCYITS 610 (781)
T ss_dssp EECTTSCEEEEET---TEEEEESCTTTC-----CCEEECGGGT------CSCCCCCEEEECSSSCEEEECSSCEEEEETT
T ss_pred EECCCCCEEEEEC---CCceEEECCCCC-----cEEEccccCC------CCCceEEEEEECCCCCEEEEcCCceEEEECC
Confidence 4445788887543 234 566 6654 3332211000 0111111223345799998887778899999
Q ss_pred CCeEE
Q 043369 239 NNRVM 243 (526)
Q Consensus 239 t~~w~ 243 (526)
++++.
T Consensus 611 ~~~~~ 615 (781)
T 3v9f_A 611 KKCFY 615 (781)
T ss_dssp TTEEE
T ss_pred CCceE
Confidence 98865
No 200
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=67.78 E-value=25 Score=33.30 Aligned_cols=67 Identities=10% Similarity=-0.028 Sum_probs=38.1
Q ss_pred EcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEecCCc-EEEEcCccCCeEEEE-cCCC
Q 043369 113 LLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPNGK-IIVVGGRFQFTYEFI-PRTS 186 (526)
Q Consensus 113 ~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~dG~-v~viGG~~~~~~E~y-P~~~ 186 (526)
+-.++++|++++.. ..+.++|+. +.+.... -.+.....-...+.-+||+ +|+.+. ....+.+| +.+.
T Consensus 7 ~~~~~~~~v~~~~~---~~v~~~d~~-~~~~~~~--~~~~~~~~~~~~~~s~dg~~~~v~~~-~~~~i~~~d~~t~ 75 (349)
T 1jmx_B 7 LKAGHEYMIVTNYP---NNLHVVDVA-SDTVYKS--CVMPDKFGPGTAMMAPDNRTAYVLNN-HYGDIYGIDLDTC 75 (349)
T ss_dssp CCTTCEEEEEEETT---TEEEEEETT-TTEEEEE--EECSSCCSSCEEEECTTSSEEEEEET-TTTEEEEEETTTT
T ss_pred ccCCCEEEEEeCCC---CeEEEEECC-CCcEEEE--EecCCCCCCceeEECCCCCEEEEEeC-CCCcEEEEeCCCC
Confidence 34578888888653 589999998 6654322 1122100223455566887 566553 33456677 5543
No 201
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=64.61 E-value=1.5e+02 Score=31.47 Aligned_cols=87 Identities=8% Similarity=-0.095 Sum_probs=49.0
Q ss_pred eEEEEeCCC-----CcEEeCccCCcc-c-------------cccceEcCCCcEEEEcCCC--------------------
Q 043369 86 HAVEFDPIT-----RKVRPLTIQTDT-W-------------CSSGALLANGVLVQTGGYR-------------------- 126 (526)
Q Consensus 86 ~~~~yDp~t-----~~w~~~~~~~~~-f-------------c~~~~~l~~G~l~v~GG~~-------------------- 126 (526)
...+||..+ ++.+.+...... . ..+...-+||+.++++...
T Consensus 142 ~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~ 221 (706)
T 2z3z_A 142 NLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESK 221 (706)
T ss_dssp EEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEE
T ss_pred eEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceE
Confidence 567889888 777766543222 1 1344567899988887521
Q ss_pred ----------CCccEEEEEcCCCCCCcccccCCCC-CcccccceeEEecCCcEEEEcCcc
Q 043369 127 ----------LGERVVRYLKPCSDCDWEEDHQNGL-ISPRWYASNQILPNGKIIVVGGRF 175 (526)
Q Consensus 127 ----------~g~~~v~~ydp~~t~~W~~~~~~~m-~~~R~y~s~~~L~dG~v~viGG~~ 175 (526)
.+...+.++|.. +.+-... ... .....-..++--+||+.++++..+
T Consensus 222 ~~~y~~~g~~~~~~~l~~~d~~-~~~~~~~--~~~~~~~~~~~~~~~spdg~~l~~~~~~ 278 (706)
T 2z3z_A 222 PLYYPMAGTPSHHVTVGIYHLA-TGKTVYL--QTGEPKEKFLTNLSWSPDENILYVAEVN 278 (706)
T ss_dssp EECCCBTTSCCCEEEEEEEETT-TTEEEEC--CCCSCTTCEEEEEEECTTSSEEEEEEEC
T ss_pred EeeCCCCCCCCCeeEEEEEECC-CCceEee--ccCCCCceeEeeEEEECCCCEEEEEEeC
Confidence 123578889987 6543333 111 112222334445799866665543
No 202
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=62.45 E-value=85 Score=33.15 Aligned_cols=90 Identities=20% Similarity=0.231 Sum_probs=49.6
Q ss_pred eEEEEeCCCCcEEeCccCCccc-----c---ccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCccccc
Q 043369 86 HAVEFDPITRKVRPLTIQTDTW-----C---SSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWY 157 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~~~~f-----c---~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y 157 (526)
....+|+.+++++++......+ . ...+..++|++++.+.. +...+..+|.. +.....+ . ... ...
T Consensus 266 ~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~d~~-~~~~~~l--~-~~~-~~~ 338 (662)
T 3azo_A 266 NLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK--GAAVLGILDPE-SGELVDA--A-GPW-TEW 338 (662)
T ss_dssp EEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS--SSCEEEEEETT-TTEEEEC--C-SSC-CEE
T ss_pred EEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc--CccEEEEEECC-CCcEEEe--c-CCC-CeE
Confidence 5677888888998876432211 1 12233468999888764 55677777886 6655444 1 111 122
Q ss_pred ceeEEecCCcEEEEcCccCCeEEEE
Q 043369 158 ASNQILPNGKIIVVGGRFQFTYEFI 182 (526)
Q Consensus 158 ~s~~~L~dG~v~viGG~~~~~~E~y 182 (526)
.......+++++++.+......++|
T Consensus 339 ~~~~s~~~~~~~~~~~~~~~~~~i~ 363 (662)
T 3azo_A 339 AATLTVSGTRAVGVAASPRTAYEVV 363 (662)
T ss_dssp EEEEEEETTEEEEEEEETTEEEEEE
T ss_pred EEEEecCCCEEEEEEcCCCCCCEEE
Confidence 2221343456666655544334454
No 203
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=60.82 E-value=55 Score=33.23 Aligned_cols=130 Identities=12% Similarity=0.033 Sum_probs=69.6
Q ss_pred CCcEEEEEc-cceEEEeccCCeEEEeccCCCCCCCCccCCCCceeecccccccccccccCCCCCccCc-EEEEEcCCCCC
Q 043369 221 DGNLFIFAN-DRAILLDYVNNRVMKNYPVMPGGISRNYPSTGSSVLLPVNLSSINVHINNNNKPVVHS-QVLICGGTLPD 298 (526)
Q Consensus 221 dG~Iy~~Gg-~~~~~yDp~t~~w~~~~p~~p~~~~r~y~~~g~~v~lp~~~~~~~~~~~~~~~~~~~g-kI~v~GG~~~~ 298 (526)
+|+||+.-. ....+||+++++.....+ ... .| .+.++ . .++ .||++.....
T Consensus 149 ~g~Lyv~d~~~~I~~id~~~~~v~~~~~--~~~----~P-~~ia~----d---------------~~G~~lyvad~~~~- 201 (430)
T 3tc9_A 149 HNHLYLVGEQHPTRLIDFEKEYVSTVYS--GLS----KV-RTICW----T---------------HEADSMIITNDQNN- 201 (430)
T ss_dssp EEEEEEEEBTEEEEEEETTTTEEEEEEC--CCS----CE-EEEEE----C---------------TTSSEEEEEECCSC-
T ss_pred CCeEEEEeCCCcEEEEECCCCEEEEEec--CCC----Cc-ceEEE----e---------------CCCCEEEEEeCCCC-
Confidence 488888754 456789999888663222 111 11 12222 1 144 4888865321
Q ss_pred CCchhhhhhcccccccceEEEEeecCCCCce---ec-ccCccccccceEEeC-CCcEEEEcCcCCCCCCccCCCCCcccc
Q 043369 299 SNENAAEAQIFLPAAKSCGRLTITAQNPKWE---ME-EMPLNRVMGDMILLP-TGDVLIINGAAKGTAGWGAAREPVLNP 373 (526)
Q Consensus 299 ~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~---~~-~M~~~R~~~~~vvLp-dG~V~vvGG~~~g~~g~~~~~~~~~~~ 373 (526)
. ....+..++.. ..|. .. .+..+ ++.++-| +|.||+.--.. ..+
T Consensus 202 ~------------~~~~v~~~~~~---g~~~~~~~l~~~~~p---~giavdp~~g~lyv~d~~~-------------~~V 250 (430)
T 3tc9_A 202 N------------DRPNNYILTRE---SGFKVITELTKGQNC---NGAETHPINGELYFNSWNA-------------GQV 250 (430)
T ss_dssp T------------TSEEEEEEEGG---GTSCSEEEEEECSSC---CCEEECTTTCCEEEEETTT-------------TEE
T ss_pred c------------ccceEEEEeCC---CceeeeeeeccCCCc---eEEEEeCCCCEEEEEECCC-------------CEE
Confidence 0 01123345532 3343 11 33333 3445677 89999975321 157
Q ss_pred EEEeCCCCcEeec---CCCCccccccccceecCCCE-EEEecC
Q 043369 374 VIYCPKINRFRIL---SPSLIPRLYHSTAHLLSDGR-VLVGGS 412 (526)
Q Consensus 374 e~YDP~t~~Wt~~---a~~~~~R~yhs~a~LlpdG~-V~v~GG 412 (526)
.+||+++...+.+ .....|+ + .++-|||+ +|++-.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~P~---g-ia~~pdG~~lyv~d~ 289 (430)
T 3tc9_A 251 FRYDFTTQETTPLFTIQDSGWEF---H-IQFHPSGNYAYIVVV 289 (430)
T ss_dssp EEEETTTTEEEEEEECSSSSCCE---E-EEECTTSSEEEEEET
T ss_pred EEEECCCCcEEEEEEcCCCCcce---e-EEEcCCCCEEEEEEC
Confidence 8999987754332 2223343 2 44568998 888744
No 204
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=60.56 E-value=59 Score=30.45 Aligned_cols=100 Identities=19% Similarity=0.175 Sum_probs=58.0
Q ss_pred ceEcCCCcEEEEcCCCCCccEEEEEcCC--CCCCcccccCCCCC-cc--cccceeEEecCCcEEEEcCccCCeEEEE-cC
Q 043369 111 GALLANGVLVQTGGYRLGERVVRYLKPC--SDCDWEEDHQNGLI-SP--RWYASNQILPNGKIIVVGGRFQFTYEFI-PR 184 (526)
Q Consensus 111 ~~~l~~G~l~v~GG~~~g~~~v~~ydp~--~t~~W~~~~~~~m~-~~--R~y~s~~~L~dG~v~viGG~~~~~~E~y-P~ 184 (526)
..+-+||.||++ . +| .+...+|- ..+.|.-. +..- .. +-++.+..-++|.||.+. ++.-+... |.
T Consensus 93 ~~fD~~G~LYav-~--dG--~iyr~~pP~~~~~~Wl~~--a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~ 163 (236)
T 1tl2_A 93 LFFDPNGYLYAV-S--KD--KLYKASPPQSDTDNWIAR--ATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPV 163 (236)
T ss_dssp EEECTTSCEEEE-E--TT--EEEEESCCCSTTCCHHHH--SEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCS
T ss_pred EEECCCCCEEEe-C--CC--EEEEeCCCcCCCCceecc--ccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCC
Confidence 455678999999 2 33 45555662 14578654 2221 11 235677777899999998 33333444 54
Q ss_pred CCCCCCcceeec-CCccccCCCCCCCCCCcceEEEecCCcEEEEE
Q 043369 185 TSDSDRKILYQL-PFLKETMHSPKIPNNLYPFLHLSTDGNLFIFA 228 (526)
Q Consensus 185 ~~~~~~~~w~~~-p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~G 228 (526)
+.. ..|... ..+-+ ...+.|++++..++|.||.+-
T Consensus 164 ~~~---~~wl~~~~~~g~------~g~~~yr~l~f~~~G~l~~v~ 199 (236)
T 1tl2_A 164 SNQ---DNWLARATKIGQ------GGWDTFKFLFFSSVGTLFGVQ 199 (236)
T ss_dssp STT---CCHHHHCEEEES------SSGGGEEEEEECTTSCEEEEE
T ss_pred CCC---cccccccceecc------CCcceEEEEEECCCCcEEEEe
Confidence 331 356422 22211 124568888888899998764
No 205
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=60.21 E-value=46 Score=31.63 Aligned_cols=102 Identities=21% Similarity=0.129 Sum_probs=54.4
Q ss_pred cceeEEEEecCCeEEEEecccCCCCCccCCCCccccCccccCCCCcceEEEEeCCCCcEEeCccCCccccccceEcCCCc
Q 043369 39 VSAMHMALLPNDRIIAFDRSHFGPSNITLPQGKCIKGVELETSDCYAHAVEFDPITRKVRPLTIQTDTWCSSGALLANGV 118 (526)
Q Consensus 39 v~~~~~a~l~~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~ 118 (526)
..+...++-++|++|+.+... + ....||+..+.-+...... .-.+.++.++|+
T Consensus 32 ~~pegia~~~~g~lyv~d~~~----------~---------------~I~~~d~~g~~~~~~~~~~--~p~gia~~~dG~ 84 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEV----------G---------------EIVSITPDGNQQIHATVEG--KVSGLAFTSNGD 84 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTT----------T---------------EEEEECTTCCEEEEEECSS--EEEEEEECTTSC
T ss_pred CCcceEEECCCCCEEEEeCCC----------C---------------eEEEECCCCceEEEEeCCC--CceeEEEcCCCc
Confidence 345667766899999887432 1 3566777654322221111 122344557899
Q ss_pred EEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEecCCcEEEE
Q 043369 119 LVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPNGKIIVV 171 (526)
Q Consensus 119 l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~dG~v~vi 171 (526)
+|++....+ ...+..||+. +.+.... ..+...|.-...+...++++|+.
T Consensus 85 l~vad~~~~-~~~v~~~d~~-~g~~~~~--~~~~~~~~~~g~~~~~~~~~~v~ 133 (306)
T 2p4o_A 85 LVATGWNAD-SIPVVSLVKS-DGTVETL--LTLPDAIFLNGITPLSDTQYLTA 133 (306)
T ss_dssp EEEEEECTT-SCEEEEEECT-TSCEEEE--EECTTCSCEEEEEESSSSEEEEE
T ss_pred EEEEeccCC-cceEEEEcCC-CCeEEEE--EeCCCccccCcccccCCCcEEEE
Confidence 998763211 1357778877 6666544 23333343333444445555553
No 206
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=59.38 E-value=2.2e+02 Score=31.77 Aligned_cols=105 Identities=10% Similarity=0.007 Sum_probs=58.4
Q ss_pred eEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEecCCcEEEEcCccCCeEEEE-cCCCCCCC
Q 043369 112 ALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPNGKIIVVGGRFQFTYEFI-PRTSDSDR 190 (526)
Q Consensus 112 ~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~dG~v~viGG~~~~~~E~y-P~~~~~~~ 190 (526)
++-++|+++++|+.+ ..+++||.. +.+-... +.....-.+++-.+ |+.++.|+.+ .++.+| ..+.
T Consensus 24 afspdg~~lAsgs~D---g~I~lw~~~-~~~~~~~----~~~~~~V~~l~fsp-g~~L~S~s~D-~~v~lWd~~~~---- 89 (902)
T 2oaj_A 24 AFDFTQNLLAIATVT---GEVHIYGQQ-QVEVVIK----LEDRSAIKEMRFVK-GIYLVVINAK-DTVYVLSLYSQ---- 89 (902)
T ss_dssp EEETTTTEEEEEETT---SEEEEECST-TCEEEEE----CSSCCCEEEEEEET-TTEEEEEETT-CEEEEEETTTC----
T ss_pred EECCCCCEEEEEeCC---CEEEEEeCC-CcEEEEE----cCCCCCEEEEEEcC-CCEEEEEECc-CeEEEEECCCC----
Confidence 455789999999873 479999976 4332211 22222222334344 7866666544 467788 4443
Q ss_pred ccee-ecCCccccCCCCCCCCCCcceEEEecCCcEEEEEcc--ceEEEeccCCeE
Q 043369 191 KILY-QLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFAND--RAILLDYVNNRV 242 (526)
Q Consensus 191 ~~w~-~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~--~~~~yDp~t~~w 242 (526)
+.. .+. .. .... .+...++|+.++.|.. ...+||..+++-
T Consensus 90 -~~~~~~~---~~-------~~V~-~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~ 132 (902)
T 2oaj_A 90 -KVLTTVF---VP-------GKIT-SIDTDASLDWMLIGLQNGSMIVYDIDRDQL 132 (902)
T ss_dssp -SEEEEEE---CS-------SCEE-EEECCTTCSEEEEEETTSCEEEEETTTTEE
T ss_pred -cEEEEEc---CC-------CCEE-EEEECCCCCEEEEEcCCCcEEEEECCCCcc
Confidence 211 111 00 0011 1233568988888875 467899888763
No 207
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=57.95 E-value=24 Score=37.05 Aligned_cols=89 Identities=16% Similarity=0.092 Sum_probs=55.1
Q ss_pred eEEEEeCCCCcEEeCccCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeE----
Q 043369 86 HAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQ---- 161 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~---- 161 (526)
...++|+.+++.+.+..... .....+..+||+.++.+.. ++...+.++|.. +.+.... .... ..-...+
T Consensus 176 ~i~~~d~~~g~~~~l~~~~~-~~~~~~~SpDG~~l~~~~~-~~~~~i~~~d~~-~~~~~~~--~~~~--~~~~~~~~~~~ 248 (582)
T 3o4h_A 176 SLFTSNLSSGGLRVFDSGEG-SFSSASISPGMKVTAGLET-AREARLVTVDPR-DGSVEDL--ELPS--KDFSSYRPTAI 248 (582)
T ss_dssp EEEEEETTTCCCEEECCSSC-EEEEEEECTTSCEEEEEEC-SSCEEEEEECTT-TCCEEEC--CCSC--SHHHHHCCSEE
T ss_pred EEEEEcCCCCCceEeecCCC-ccccceECCCCCEEEEccC-CCeeEEEEEcCC-CCcEEEc--cCCC--cChhhhhhccc
Confidence 46789999999887753322 2344667789998885432 444689999998 6665522 1111 1111122
Q ss_pred ----EecCCcEEEEcCccCCeEEEE
Q 043369 162 ----ILPNGKIIVVGGRFQFTYEFI 182 (526)
Q Consensus 162 ----~L~dG~v~viGG~~~~~~E~y 182 (526)
.-+||++++.+..++ ...+|
T Consensus 249 ~~~~~spdg~~~~~~~~~g-~~~l~ 272 (582)
T 3o4h_A 249 TWLGYLPDGRLAVVARREG-RSAVF 272 (582)
T ss_dssp EEEEECTTSCEEEEEEETT-EEEEE
T ss_pred cceeEcCCCcEEEEEEcCC-cEEEE
Confidence 457998888776554 46666
No 208
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=56.48 E-value=1.3e+02 Score=28.24 Aligned_cols=54 Identities=13% Similarity=0.082 Sum_probs=32.0
Q ss_pred ceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEecCCcEEEEcC
Q 043369 111 GALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPNGKIIVVGG 173 (526)
Q Consensus 111 ~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~dG~v~viGG 173 (526)
.+.-++|+||++--. ...+..|||. +. .... ..+ +..-.+.+.-+||++||...
T Consensus 37 ia~~~~g~lyv~d~~---~~~I~~~d~~-g~-~~~~--~~~--~~~p~gia~~~dG~l~vad~ 90 (306)
T 2p4o_A 37 LASAPDGTIFVTNHE---VGEIVSITPD-GN-QQIH--ATV--EGKVSGLAFTSNGDLVATGW 90 (306)
T ss_dssp EEECTTSCEEEEETT---TTEEEEECTT-CC-EEEE--EEC--SSEEEEEEECTTSCEEEEEE
T ss_pred EEECCCCCEEEEeCC---CCeEEEECCC-Cc-eEEE--EeC--CCCceeEEEcCCCcEEEEec
Confidence 344578999998532 2578999997 43 2222 112 12223455556899998764
No 209
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=54.99 E-value=1.7e+02 Score=28.95 Aligned_cols=113 Identities=8% Similarity=-0.061 Sum_probs=54.6
Q ss_pred ceEcCCCc-EEEEcCCCCCccEEEEEcCCCCC---CcccccCCCC-CcccccceeEEec-CCcEEEEcCccCCeEEEE-c
Q 043369 111 GALLANGV-LVQTGGYRLGERVVRYLKPCSDC---DWEEDHQNGL-ISPRWYASNQILP-NGKIIVVGGRFQFTYEFI-P 183 (526)
Q Consensus 111 ~~~l~~G~-l~v~GG~~~g~~~v~~ydp~~t~---~W~~~~~~~m-~~~R~y~s~~~L~-dG~v~viGG~~~~~~E~y-P 183 (526)
....+++. ++++|+.. ..+.+||.. +. .+...+...+ .....-.+++..+ ++.+++.|+.++ .+.+| .
T Consensus 187 l~~~~~~~~~l~s~~~d---g~i~vwd~~-~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg-~i~i~d~ 261 (430)
T 2xyi_A 187 LSWNPNLNGYLLSASDD---HTICLWDIN-ATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQ-KLMIWDT 261 (430)
T ss_dssp EEECTTSTTEEEEECTT---SCEEEEETT-SCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTS-EEEEEET
T ss_pred EEeCCCCCCeEEEEeCC---CeEEEEeCC-CCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCC-eEEEEEC
Confidence 44556777 88888763 468889886 41 2221100011 1111112333334 678888887654 56677 4
Q ss_pred CCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCc-EEEEEccc--eEEEeccC
Q 043369 184 RTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGN-LFIFANDR--AILLDYVN 239 (526)
Q Consensus 184 ~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~-Iy~~Gg~~--~~~yDp~t 239 (526)
.+.. .......+.. .. .... .+...++++ +++.|+.+ ..+||..+
T Consensus 262 ~~~~----~~~~~~~~~~-~~-----~~v~-~i~~~p~~~~~l~tg~~dg~v~vwd~~~ 309 (430)
T 2xyi_A 262 RNNN----TSKPSHTVDA-HT-----AEVN-CLSFNPYSEFILATGSADKTVALWDLRN 309 (430)
T ss_dssp TCSC----SSSCSEEEEC-CS-----SCEE-EEEECSSCTTEEEEEETTSEEEEEETTC
T ss_pred CCCC----CCcceeEeec-CC-----CCeE-EEEeCCCCCCEEEEEeCCCeEEEEeCCC
Confidence 4321 0111000100 00 0011 123345665 78888753 67888876
No 210
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=54.12 E-value=1.3e+02 Score=27.44 Aligned_cols=139 Identities=15% Similarity=0.049 Sum_probs=69.2
Q ss_pred eEEEEeCCCCcEEeCccCCccccccceEcC-CCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEe-
Q 043369 86 HAVEFDPITRKVRPLTIQTDTWCSSGALLA-NGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQIL- 163 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~-~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L- 163 (526)
....+|+.....+.+.........+.++-+ +|+||++-... ....+.++++. ...-.......+. .+...++
T Consensus 102 ~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~-~~~~I~~~~~d-g~~~~~~~~~~~~----~P~gia~d 175 (267)
T 1npe_A 102 RIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNR-DNPKIETSHMD-GTNRRILAQDNLG----LPNGLTFD 175 (267)
T ss_dssp EEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCS-SSCEEEEEETT-SCCCEEEECTTCS----CEEEEEEE
T ss_pred EEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCC-CCcEEEEEecC-CCCcEEEEECCCC----CCcEEEEc
Confidence 345566654332222111112223344555 58899875321 13578888876 4322222001232 2333334
Q ss_pred cC-CcEEEEcCccCCeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEE--ccceEEEeccC
Q 043369 164 PN-GKIIVVGGRFQFTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFA--NDRAILLDYVN 239 (526)
Q Consensus 164 ~d-G~v~viGG~~~~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~G--g~~~~~yDp~t 239 (526)
++ +++|+.--. ...+.++ +... .-... ... ..+|.....-+++||+.- +....++|+.+
T Consensus 176 ~~~~~lyv~d~~-~~~I~~~~~~g~-----~~~~~--~~~---------~~~P~gi~~d~~~lyva~~~~~~v~~~d~~~ 238 (267)
T 1npe_A 176 AFSSQLCWVDAG-THRAECLNPAQP-----GRRKV--LEG---------LQYPFAVTSYGKNLYYTDWKTNSVIAMDLAI 238 (267)
T ss_dssp TTTTEEEEEETT-TTEEEEEETTEE-----EEEEE--EEC---------CCSEEEEEEETTEEEEEETTTTEEEEEETTT
T ss_pred CCCCEEEEEECC-CCEEEEEecCCC-----ceEEE--ecC---------CCCceEEEEeCCEEEEEECCCCeEEEEeCCC
Confidence 33 678877543 2356666 4321 11111 110 124666555578898874 24678899998
Q ss_pred CeEEEecc
Q 043369 240 NRVMKNYP 247 (526)
Q Consensus 240 ~~w~~~~p 247 (526)
++..+.++
T Consensus 239 g~~~~~i~ 246 (267)
T 1npe_A 239 SKEMDTFH 246 (267)
T ss_dssp TEEEEEEC
T ss_pred CCceEEEc
Confidence 88665553
No 211
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=53.63 E-value=82 Score=33.25 Aligned_cols=93 Identities=16% Similarity=0.121 Sum_probs=53.4
Q ss_pred eEEEEeCC-CC---cEEeCccCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccC--CCCCcccccc-
Q 043369 86 HAVEFDPI-TR---KVRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQ--NGLISPRWYA- 158 (526)
Q Consensus 86 ~~~~yDp~-t~---~w~~~~~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~--~~m~~~R~y~- 158 (526)
...++|.. ++ +.+.+...+..........+||++++++.. ++...+..+|+. +.++..+.. .....+.|.+
T Consensus 218 ~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~-~~~~~l~~~~~~-~~~~~~l~~~~~~~~~p~w~~~ 295 (662)
T 3azo_A 218 ELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDR-TGWWNLHRVDPA-TGAATQLCRREEEFAGPLWTPG 295 (662)
T ss_dssp EEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECT-TSSCEEEEECTT-TCCEEESSCCSSBSSCCCCSTT
T ss_pred EEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECC-CCCeEEEEEECC-CCceeecccccccccCcccccc
Confidence 56778888 56 444443322222223445679998877754 344578899987 677766511 1122344432
Q ss_pred --eeEEecCCcEEEEcCccCCeEEEE
Q 043369 159 --SNQILPNGKIIVVGGRFQFTYEFI 182 (526)
Q Consensus 159 --s~~~L~dG~v~viGG~~~~~~E~y 182 (526)
+.+..+||++++.+.. ....+|
T Consensus 296 ~~~~~~~~~~~~~~~~~~--~~~~l~ 319 (662)
T 3azo_A 296 MRWFAPLANGLIAVVHGK--GAAVLG 319 (662)
T ss_dssp CCSEEECTTSCEEEEEBS--SSCEEE
T ss_pred CceEeEeCCCEEEEEEEc--CccEEE
Confidence 3444468998888765 344555
No 212
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=53.14 E-value=34 Score=33.93 Aligned_cols=90 Identities=12% Similarity=-0.033 Sum_probs=48.6
Q ss_pred eEEEEeCCCCcEEe-CccC-CccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEE-
Q 043369 86 HAVEFDPITRKVRP-LTIQ-TDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQI- 162 (526)
Q Consensus 86 ~~~~yDp~t~~w~~-~~~~-~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~- 162 (526)
...+||..+.+-.. +... +..........++|+++++|+.. ..+++||.. +.+.... -.+.....-.+++.
T Consensus 193 ~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d---g~i~iwd~~-~~~~~~~--~~~~~~~~v~~~~~~ 266 (437)
T 3gre_A 193 RVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTR---GIIDIWDIR-FNVLIRS--WSFGDHAPITHVEVC 266 (437)
T ss_dssp EEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETT---SCEEEEETT-TTEEEEE--EBCTTCEEEEEEEEC
T ss_pred eEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCC---CeEEEEEcC-CccEEEE--EecCCCCceEEEEec
Confidence 46789998876433 2221 22233334456789999999874 468999987 5433221 01111111111111
Q ss_pred ---ecCCcEEEEcCccCCeEEEE
Q 043369 163 ---LPNGKIIVVGGRFQFTYEFI 182 (526)
Q Consensus 163 ---L~dG~v~viGG~~~~~~E~y 182 (526)
-+||+.++.|+.++ .+.+|
T Consensus 267 ~~~s~~~~~l~s~~~dg-~i~iw 288 (437)
T 3gre_A 267 QFYGKNSVIVVGGSSKT-FLTIW 288 (437)
T ss_dssp TTTCTTEEEEEEESTTE-EEEEE
T ss_pred cccCCCccEEEEEcCCC-cEEEE
Confidence 14677888887654 45555
No 213
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=52.39 E-value=97 Score=32.90 Aligned_cols=27 Identities=22% Similarity=0.389 Sum_probs=20.2
Q ss_pred EecCCcEEEEEc-cceEEEeccCCe--EEE
Q 043369 218 LSTDGNLFIFAN-DRAILLDYVNNR--VMK 244 (526)
Q Consensus 218 ~~~dG~Iy~~Gg-~~~~~yDp~t~~--w~~ 244 (526)
++.+|+||+... .....+|.++++ |..
T Consensus 65 ~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~ 94 (582)
T 1flg_A 65 IVSDGVIYVTASYSRLFALDAKTGKRLWTY 94 (582)
T ss_dssp EEETTEEEEEETTTEEEEEESSSCCEEEEE
T ss_pred EEECCEEEEEcCCCCEEEEECCCCcEEEEE
Confidence 456999999876 457889998765 653
No 214
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=52.34 E-value=1.4e+02 Score=27.41 Aligned_cols=137 Identities=8% Similarity=-0.047 Sum_probs=66.5
Q ss_pred EEEEeCCCCcEEeC-ccC----CccccccceEcCCCcEEEEcCCC------------CCccEEEEEcCCCCCCcccccCC
Q 043369 87 AVEFDPITRKVRPL-TIQ----TDTWCSSGALLANGVLVQTGGYR------------LGERVVRYLKPCSDCDWEEDHQN 149 (526)
Q Consensus 87 ~~~yDp~t~~w~~~-~~~----~~~fc~~~~~l~~G~l~v~GG~~------------~g~~~v~~ydp~~t~~W~~~~~~ 149 (526)
...||+. ++.+.+ ... ........+..++|++++..... .....+.+||+. .+.... ..
T Consensus 94 l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--g~~~~~-~~ 169 (314)
T 1pjx_A 94 LLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD--GQMIQV-DT 169 (314)
T ss_dssp EEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT--SCEEEE-EE
T ss_pred EEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC--CCEEEe-cc
Confidence 5678888 777765 321 11222334556789999876421 012468888875 233322 01
Q ss_pred CCCcccccceeEEe----cCCc-EEEEcCccCCeEEEE-cC-CCCCCCcceeecCCccccCCCCCCCCC-CcceE-EEec
Q 043369 150 GLISPRWYASNQIL----PNGK-IIVVGGRFQFTYEFI-PR-TSDSDRKILYQLPFLKETMHSPKIPNN-LYPFL-HLST 220 (526)
Q Consensus 150 ~m~~~R~y~s~~~L----~dG~-v~viGG~~~~~~E~y-P~-~~~~~~~~w~~~p~l~~~~~~~~~~~~-~yp~~-~~~~ 220 (526)
.+..+ .+.+.- +||+ +|+.... ...+.+| +. .+ .......... .. ... ..|.. ..-+
T Consensus 170 ~~~~~---~~i~~~~~~d~dg~~l~v~~~~-~~~i~~~~~~~~g-----~~~~~~~~~~-~~----~~~~~~p~~i~~d~ 235 (314)
T 1pjx_A 170 AFQFP---NGIAVRHMNDGRPYQLIVAETP-TKKLWSYDIKGPA-----KIENKKVWGH-IP----GTHEGGADGMDFDE 235 (314)
T ss_dssp EESSE---EEEEEEECTTSCEEEEEEEETT-TTEEEEEEEEETT-----EEEEEEEEEE-CC----CCSSCEEEEEEEBT
T ss_pred CCCCc---ceEEEecccCCCCCEEEEEECC-CCeEEEEECCCCC-----ccccceEEEE-CC----CCCCCCCCceEECC
Confidence 12212 234444 6774 6665432 2345566 33 22 2111000000 00 000 12333 3345
Q ss_pred CCcEEEEE--ccceEEEeccCCe
Q 043369 221 DGNLFIFA--NDRAILLDYVNNR 241 (526)
Q Consensus 221 dG~Iy~~G--g~~~~~yDp~t~~ 241 (526)
+|+||+.. +....+||+.+++
T Consensus 236 ~G~l~v~~~~~~~i~~~d~~~g~ 258 (314)
T 1pjx_A 236 DNNLLVANWGSSHIEVFGPDGGQ 258 (314)
T ss_dssp TCCEEEEEETTTEEEEECTTCBS
T ss_pred CCCEEEEEcCCCEEEEEcCCCCc
Confidence 89999874 3457889998544
No 215
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=52.21 E-value=2.6e+02 Score=30.25 Aligned_cols=128 Identities=15% Similarity=0.009 Sum_probs=64.2
Q ss_pred EEEEeCCCCcEEeCccC--C-ccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEe
Q 043369 87 AVEFDPITRKVRPLTIQ--T-DTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQIL 163 (526)
Q Consensus 87 ~~~yDp~t~~w~~~~~~--~-~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L 163 (526)
...||+.+++++.+... . +..........+|+|++.. . ..+.+|||. +.++.......|+...- .+.+ .
T Consensus 495 l~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt-~----~Gl~~~~~~-~~~~~~~~~~gl~~~~i-~~i~-~ 566 (758)
T 3ott_A 495 IDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVGF-H----GGVMRINPK-DESQQSISFGSFSNNEI-LSMT-C 566 (758)
T ss_dssp EEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEEE-T----TEEEEECC---CCCCBCCCCC---CCE-EEEE-E
T ss_pred cEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEEe-c----CceEEEecC-CCceEEecccCCCccce-EEEE-E
Confidence 45799999988876321 1 1111122334578998753 2 247889998 77775541113432221 2233 3
Q ss_pred cCCcEEEEcCccCCeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEccceEEEeccC
Q 043369 164 PNGKIIVVGGRFQFTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDRAILLDYVN 239 (526)
Q Consensus 164 ~dG~v~viGG~~~~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~~~~~yDp~t 239 (526)
.+|++++... ...-+| |.+. +..... +.. ...........||+||+-+.+....|||+.
T Consensus 567 ~~g~lWi~t~---~Gl~~~~~~~~-----~~~~~~-~~~--------~~~~~~~~~~~~G~l~fG~~~Gl~~f~p~~ 626 (758)
T 3ott_A 567 VKNSIWVSTT---NGLWIIDRKTM-----DARQQN-MTN--------KRFTSLLFDPKEDCVYLGGADGFGISHSNL 626 (758)
T ss_dssp ETTEEEEEES---SCEEEEETTTC-----CEEEC---CC--------CCCSEEEEETTTTEEEEECBSEEEEEEC--
T ss_pred CCCCEEEECC---CCeEEEcCCCc-----eeEEec-CCC--------CceeeeEEECCCCcEEEecCCceEEEChhh
Confidence 4788887552 235566 7765 222211 111 011112223358999866656677899974
No 216
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=51.32 E-value=1.3e+02 Score=32.22 Aligned_cols=27 Identities=19% Similarity=0.356 Sum_probs=19.5
Q ss_pred EecCCcEEEEEc--cceEEEec-cCCe--EEE
Q 043369 218 LSTDGNLFIFAN--DRAILLDY-VNNR--VMK 244 (526)
Q Consensus 218 ~~~dG~Iy~~Gg--~~~~~yDp-~t~~--w~~ 244 (526)
++.+|+||+... .....+|. ++++ |..
T Consensus 59 ~v~~g~vyv~~~~~~~v~AlD~~~tG~~lW~~ 90 (599)
T 1w6s_A 59 LVVDGKMYIHTSFPNNTFALGLDDPGTILWQD 90 (599)
T ss_dssp EEETTEEEEECSTTTCEEEEETTCTTSEEEEE
T ss_pred EEECCEEEEEeCCCCEEEEEeCCCCCcEEEEE
Confidence 345899998876 45788999 7764 653
No 217
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=50.61 E-value=1.1e+02 Score=29.27 Aligned_cols=57 Identities=14% Similarity=0.151 Sum_probs=35.9
Q ss_pred eEEEEeCCCCcEEeCccCCccccccceEcC-CCcEEEEcCCC-------------CCccEEEEEcCCCCCCcccc
Q 043369 86 HAVEFDPITRKVRPLTIQTDTWCSSGALLA-NGVLVQTGGYR-------------LGERVVRYLKPCSDCDWEED 146 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~-~G~l~v~GG~~-------------~g~~~v~~ydp~~t~~W~~~ 146 (526)
...+||+.+++.+.+..... +. ....+ ||+++++.+.. ++...+.++|+. +.+...+
T Consensus 265 ~l~~~d~~~g~~~~l~~~~~--~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~-~~~~~~l 335 (396)
T 3c5m_A 265 VIYKANPETLENEEVMVMPP--CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTK-AKSAQKL 335 (396)
T ss_dssp EEEEECTTTCCEEEEEECCS--EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETT-TTBCCEE
T ss_pred eEEEEECCCCCeEEeeeCCC--CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecc-cCceEEc
Confidence 36789998888776643322 22 45567 99988875421 133678889987 6655443
No 218
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=50.06 E-value=2e+02 Score=31.35 Aligned_cols=135 Identities=13% Similarity=0.063 Sum_probs=72.8
Q ss_pred EEEEeCCCCcEEeCccC------CccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCccccc----CCCCCcccc
Q 043369 87 AVEFDPITRKVRPLTIQ------TDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDH----QNGLISPRW 156 (526)
Q Consensus 87 ~~~yDp~t~~w~~~~~~------~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~----~~~m~~~R~ 156 (526)
..+||+.+++|+..... ...+........+|+|++... . .+.+||+. +.++ ... ...++...
T Consensus 473 l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~--~---Gl~~~~~~-~~~~-~~~~~~~~~~l~~~~- 544 (795)
T 4a2l_A 473 LVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE--E---GLSVFKQE-GLDI-QKASILPVSNVTKLF- 544 (795)
T ss_dssp EEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES--S---CEEEEEEE-TTEE-EECCCSCSCGGGGSC-
T ss_pred eeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC--C---ceEEEeCC-CCeE-EEecCCCCCCCCCCe-
Confidence 46799999999877532 111222233446788888543 2 36678887 6666 320 01122111
Q ss_pred cceeEEecCCcEEEEcCccCCeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEccceEEE
Q 043369 157 YASNQILPNGKIIVVGGRFQFTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDRAILL 235 (526)
Q Consensus 157 y~s~~~L~dG~v~viGG~~~~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~~~~~y 235 (526)
-.+.+.-.+|++++... . ..-.| |.++ .+........ .+.+..-....-.+|+|++...+...+|
T Consensus 545 i~~i~~d~~g~lWigT~-~--Gl~~~d~~~~-----~~~~~~~~~g------l~~~~i~~i~~d~~g~lWi~t~~Gl~~~ 610 (795)
T 4a2l_A 545 TNCIYEASNGIIWVGTR-E--GFYCFNEKDK-----QIKRYNTTNG------LPNNVVYGILEDSFGRLWLSTNRGISCF 610 (795)
T ss_dssp EEEEEECTTSCEEEEES-S--CEEEEETTTT-----EEEEECGGGT------CSCSCEEEEEECTTSCEEEEETTEEEEE
T ss_pred eEEEEECCCCCEEEEeC-C--CceeECCCCC-----cEEEeCCCCC------CchhheEEEEECCCCCEEEEcCCceEEE
Confidence 22344445789887442 2 35556 6554 3332211000 1111111122234799998887778899
Q ss_pred eccCCeEE
Q 043369 236 DYVNNRVM 243 (526)
Q Consensus 236 Dp~t~~w~ 243 (526)
||+++++.
T Consensus 611 ~~~~~~~~ 618 (795)
T 4a2l_A 611 NPETEKFR 618 (795)
T ss_dssp ETTTTEEE
T ss_pred cCCCCcEE
Confidence 99998875
No 219
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=49.89 E-value=65 Score=31.64 Aligned_cols=29 Identities=14% Similarity=0.169 Sum_probs=21.5
Q ss_pred CcEEEcccCCccceeEEEEecCCeEEEEec
Q 043369 28 GKWKLLKRSIGVSAMHMALLPNDRIIAFDR 57 (526)
Q Consensus 28 g~W~~~~~~~~v~~~~~a~l~~gkv~~~gg 57 (526)
-+++.+... .-.+.+++..++|++|+.+.
T Consensus 21 ~~~~~va~~-l~~P~~ia~~pdG~l~V~e~ 49 (352)
T 2ism_A 21 LRVEEVVGG-LEVPWALAFLPDGGMLIAER 49 (352)
T ss_dssp CCEEEEECC-CSCEEEEEECTTSCEEEEET
T ss_pred cEEEEEECC-CCCceEEEEcCCCeEEEEeC
Confidence 577777642 23578999899999998865
No 220
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=49.23 E-value=32 Score=37.32 Aligned_cols=96 Identities=10% Similarity=0.107 Sum_probs=52.6
Q ss_pred cCcEEEEEcCCCCCCCchhhhhhcccccccceEEEEeecCCCCceec-ccCccc-----c--ccceEEeCCCcEEEEcCc
Q 043369 285 VHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTITAQNPKWEME-EMPLNR-----V--MGDMILLPTGDVLIINGA 356 (526)
Q Consensus 285 ~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R-----~--~~~~vvLpdG~V~vvGG~ 356 (526)
.+++||+.... ..+.++|..+....|+.. ..+... . ....+++-+|+||+....
T Consensus 65 ~~g~vyv~~~~------------------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d 126 (668)
T 1kv9_A 65 HDGVIYTSMSW------------------SRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLD 126 (668)
T ss_dssp ETTEEEEEEGG------------------GEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTT
T ss_pred ECCEEEEECCC------------------CeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCC
Confidence 48899887542 135678876555679864 222110 0 011233448888875321
Q ss_pred CCCCCCccCCCCCccccEEEeCCCC--cEeecCCCCccccccccceecCCCEEEEecC
Q 043369 357 AKGTAGWGAAREPVLNPVIYCPKIN--RFRILSPSLIPRLYHSTAHLLSDGRVLVGGS 412 (526)
Q Consensus 357 ~~g~~g~~~~~~~~~~~e~YDP~t~--~Wt~~a~~~~~R~yhs~a~LlpdG~V~v~GG 412 (526)
+ .+..+|+++. .|+.-..-.........+-++.+|+||+..+
T Consensus 127 --g------------~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~ 170 (668)
T 1kv9_A 127 --G------------RLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNG 170 (668)
T ss_dssp --S------------EEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCB
T ss_pred --C------------EEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCC
Confidence 1 4678999888 5876432111112223333445999988654
No 221
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=46.97 E-value=40 Score=36.72 Aligned_cols=96 Identities=14% Similarity=0.133 Sum_probs=52.6
Q ss_pred cCcEEEEEcCCCCCCCchhhhhhcccccccceEEEEeecCCCCceec-ccCcc-----cc--ccceEEeCCCcEEEEcCc
Q 043369 285 VHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTITAQNPKWEME-EMPLN-----RV--MGDMILLPTGDVLIINGA 356 (526)
Q Consensus 285 ~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~-----R~--~~~~vvLpdG~V~vvGG~ 356 (526)
.+++||+.... ..+.++|..+....|+.. ..+.. ++ ...++++-+|+||+...
T Consensus 69 ~~g~vyv~~~~------------------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~- 129 (689)
T 1yiq_A 69 VDGVMYTTGPF------------------SVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL- 129 (689)
T ss_dssp ETTEEEEECGG------------------GCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-
T ss_pred ECCEEEEEcCC------------------CeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc-
Confidence 48899987542 135678876555679864 22210 00 01123445888887542
Q ss_pred CCCCCCccCCCCCccccEEEeCCCC--cEeecCCCCccc-cccccceecCCCEEEEecC
Q 043369 357 AKGTAGWGAAREPVLNPVIYCPKIN--RFRILSPSLIPR-LYHSTAHLLSDGRVLVGGS 412 (526)
Q Consensus 357 ~~g~~g~~~~~~~~~~~e~YDP~t~--~Wt~~a~~~~~R-~yhs~a~LlpdG~V~v~GG 412 (526)
+ + .+..+|.++. .|+.-......+ ..+..+-++.+|+||+..+
T Consensus 130 d-g------------~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~ 175 (689)
T 1yiq_A 130 D-G------------RLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNG 175 (689)
T ss_dssp T-S------------EEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCB
T ss_pred C-C------------EEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeC
Confidence 1 1 4678999888 587644211111 1222233445999998654
No 222
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=46.83 E-value=1.8e+02 Score=26.94 Aligned_cols=122 Identities=11% Similarity=0.062 Sum_probs=56.9
Q ss_pred EEEEeCCCCcEEeCccCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEecCC
Q 043369 87 AVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPNG 166 (526)
Q Consensus 87 ~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~dG 166 (526)
...|| .+++...................+|+|++. .. . +..||+.....|... ....- ..+.+. .+|
T Consensus 42 l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~-t~----~-l~~~d~~g~~~~~~~----~~~~~-~~~~~~-~~~ 108 (330)
T 3hxj_A 42 LYAIN-TDGSVKWFFKSGEIIECRPSIGKDGTIYFG-SD----K-VYAINPDGTEKWRFD----TKKAI-VSDFTI-FED 108 (330)
T ss_dssp TEEEC-TTSCEEESSCGGGEEEECCEETTTTEECCS-SC----E-EEEECCCGGGGGGSC----C------CCEEE-ETT
T ss_pred EEEEC-CCCcEEEEEecCCCcccceEEecCCcEEEe-cC----c-EEEECCCCcEEEEEE----CCCCc-ccCceE-ECC
Confidence 34577 555543222222223233444457887763 21 3 888998523346432 11111 122233 388
Q ss_pred cEEEEcCccCCeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEc-cceEEEecc
Q 043369 167 KIIVVGGRFQFTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFAN-DRAILLDYV 238 (526)
Q Consensus 167 ~v~viGG~~~~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg-~~~~~yDp~ 238 (526)
.||+.. .+ ..+..| +. +. ..|..... .. .........+|+||+... ....+||+.
T Consensus 109 ~l~v~t-~~-~~l~~~d~~-g~---~~~~~~~~--~~---------~~~~~~~~~~g~l~vgt~~~~l~~~d~~ 165 (330)
T 3hxj_A 109 ILYVTS-MD-GHLYAINTD-GT---EKWRFKTK--KA---------IYATPIVSEDGTIYVGSNDNYLYAINPD 165 (330)
T ss_dssp EEEEEC-TT-SEEEEECTT-SC---EEEEEECS--SC---------CCSCCEECTTSCEEEECTTSEEEEECTT
T ss_pred EEEEEe-cC-CEEEEEcCC-CC---EEEEEcCC--Cc---------eeeeeEEcCCCEEEEEcCCCEEEEECCC
Confidence 888743 22 235556 55 31 24542210 00 001112344788887543 456788998
No 223
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=46.27 E-value=57 Score=34.64 Aligned_cols=96 Identities=9% Similarity=0.168 Sum_probs=52.5
Q ss_pred cCcEEEEEcCCCCCCCchhhhhhcccccccceEEEEe-ecCCCCceec-ccCcc-c----c--ccceEEeCCCcEEEEcC
Q 043369 285 VHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTI-TAQNPKWEME-EMPLN-R----V--MGDMILLPTGDVLIING 355 (526)
Q Consensus 285 ~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~-~~~~~~W~~~-~M~~~-R----~--~~~~vvLpdG~V~vvGG 355 (526)
.+++||+....+ ..+.++|. .+....|+.. ..... + + ....+++-+|+||+...
T Consensus 61 ~~g~vyv~~~~~-----------------~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~ 123 (571)
T 2ad6_A 61 IGDMMYVHSAFP-----------------NNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA 123 (571)
T ss_dssp ETTEEEEECSTT-----------------TCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT
T ss_pred ECCEEEEEeCCC-----------------CEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC
Confidence 488999886521 13567887 6555679864 22211 1 0 01123445888888643
Q ss_pred cCCCCCCccCCCCCccccEEEeCCCC--cEeecCCC-CccccccccceecCCCEEEEecC
Q 043369 356 AAKGTAGWGAAREPVLNPVIYCPKIN--RFRILSPS-LIPRLYHSTAHLLSDGRVLVGGS 412 (526)
Q Consensus 356 ~~~g~~g~~~~~~~~~~~e~YDP~t~--~Wt~~a~~-~~~R~yhs~a~LlpdG~V~v~GG 412 (526)
.. .+..+|+++. .|+.-..- .......+ +-++.+|+||+..+
T Consensus 124 dg--------------~l~alD~~tG~~~W~~~~~~~~~~~~~~~-~P~v~~g~v~vg~~ 168 (571)
T 2ad6_A 124 NG--------------HLLALDAKTGKINWEVEVCDPKVGSTLTQ-APFVAKDTVLMGCS 168 (571)
T ss_dssp TS--------------EEEEEETTTCCEEEEEECCCGGGTCBCCS-CCEEETTEEEEECB
T ss_pred CC--------------EEEEEECCCCCEEEEecCCCCCccceecc-CCEEECCEEEEEec
Confidence 11 4678999888 68753221 11111122 22335899988764
No 224
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=45.63 E-value=3.1e+02 Score=29.40 Aligned_cols=95 Identities=15% Similarity=0.076 Sum_probs=47.1
Q ss_pred eEEEEeCCCCc--EEeCccCC-----cccc---ccceEcCCCcEEEEcCCCCCccEEEEEcCCCCC--CcccccCC-CCC
Q 043369 86 HAVEFDPITRK--VRPLTIQT-----DTWC---SSGALLANGVLVQTGGYRLGERVVRYLKPCSDC--DWEEDHQN-GLI 152 (526)
Q Consensus 86 ~~~~yDp~t~~--w~~~~~~~-----~~fc---~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~--~W~~~~~~-~m~ 152 (526)
....+|.+|++ |+.-.... ..+| ..+..+.+++||+.... ..+..+|.. +. .|... .. +..
T Consensus 88 ~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~d----g~l~alD~~-tG~~~W~~~-~~~~~~ 161 (677)
T 1kb0_A 88 VVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWD----GRLIALDAA-TGKEVWHQN-TFEGQK 161 (677)
T ss_dssp CEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTT----SEEEEEETT-TCCEEEEEE-TTTTCC
T ss_pred eEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCC----CEEEEEECC-CCCEEeeec-CCcCcC
Confidence 36678888876 65432211 1122 12345567777776432 468888987 44 47654 11 111
Q ss_pred cccccceeEEecCCcEEEEcCcc----CCeEEEE-cCCC
Q 043369 153 SPRWYASNQILPNGKIIVVGGRF----QFTYEFI-PRTS 186 (526)
Q Consensus 153 ~~R~y~s~~~L~dG~v~viGG~~----~~~~E~y-P~~~ 186 (526)
......+..++.+|+||+..+.. ...+..| ..++
T Consensus 162 ~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG 200 (677)
T 1kb0_A 162 GSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETG 200 (677)
T ss_dssp SSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTC
T ss_pred cCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCC
Confidence 11111223334478887754321 1234455 5555
No 225
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=45.39 E-value=1.4e+02 Score=30.33 Aligned_cols=23 Identities=26% Similarity=0.355 Sum_probs=17.6
Q ss_pred CcEEEEEc-cceEEEeccCCeEEE
Q 043369 222 GNLFIFAN-DRAILLDYVNNRVMK 244 (526)
Q Consensus 222 G~Iy~~Gg-~~~~~yDp~t~~w~~ 244 (526)
|+||+.-. ....++|+.+++...
T Consensus 153 g~Lyv~D~~~~I~~id~~~g~v~~ 176 (433)
T 4hw6_A 153 DDLYWVGQRDAFRHVDFVNQYVDI 176 (433)
T ss_dssp CEEEEECBTSCEEEEETTTTEEEE
T ss_pred CEEEEEeCCCCEEEEECCCCEEEE
Confidence 89998743 567889998888763
No 226
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=44.04 E-value=3.3e+02 Score=29.17 Aligned_cols=79 Identities=14% Similarity=0.124 Sum_probs=40.7
Q ss_pred eEEEEeCCCCc--EEeCccCC-----ccccc---cceEcCCCcEEEEcCCCCCccEEEEEcCCCCC--CcccccCCCCCc
Q 043369 86 HAVEFDPITRK--VRPLTIQT-----DTWCS---SGALLANGVLVQTGGYRLGERVVRYLKPCSDC--DWEEDHQNGLIS 153 (526)
Q Consensus 86 ~~~~yDp~t~~--w~~~~~~~-----~~fc~---~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~--~W~~~~~~~m~~ 153 (526)
....+|.+|++ |+.-.... ...|. .+..+.+++||+.... ..+..+|.. +. .|+.. ..-..
T Consensus 77 ~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d----g~l~alD~~-tG~~~W~~~--~~~~~ 149 (668)
T 1kv9_A 77 RVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLD----GRLIALDAK-TGKAIWSQQ--TTDPA 149 (668)
T ss_dssp EEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTT----SEEEEEETT-TCCEEEEEE--CSCTT
T ss_pred eEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCC----CEEEEEECC-CCCEeeeec--cCCCC
Confidence 36678888776 66432211 12231 2345567787775432 468889987 44 58654 11111
Q ss_pred ccc-cceeEEecCCcEEEE
Q 043369 154 PRW-YASNQILPNGKIIVV 171 (526)
Q Consensus 154 ~R~-y~s~~~L~dG~v~vi 171 (526)
..+ ..+..++.+|+||+.
T Consensus 150 ~~~~~~~~P~v~~~~v~vg 168 (668)
T 1kv9_A 150 KPYSITGAPRVVKGKVIIG 168 (668)
T ss_dssp SSCBCCSCCEEETTEEEEC
T ss_pred CcceecCCCEEECCEEEEe
Confidence 111 112223447888774
No 227
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=43.02 E-value=1.4e+02 Score=33.86 Aligned_cols=84 Identities=7% Similarity=-0.098 Sum_probs=49.8
Q ss_pred eEEEEeCCCCcEEeCccCCccccccceEcCCCcEEEEcCCCC-------CccEEEEEcCCCCCCcccccCCCCCcccccc
Q 043369 86 HAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYRL-------GERVVRYLKPCSDCDWEEDHQNGLISPRWYA 158 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~v~GG~~~-------g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~ 158 (526)
...+||..+++.+.+...+.......+.-+||+.+++++... ....+.++|.. +.+...+ .. ....-.
T Consensus 401 ~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~-~g~~~~l--~~--~~~~~~ 475 (1045)
T 1k32_A 401 EIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDME-GRKIFAA--TT--ENSHDY 475 (1045)
T ss_dssp EEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETT-TTEEEEC--SC--SSSBEE
T ss_pred eEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECC-CCcEEEe--eC--CCcccC
Confidence 467899999888776533333333456678999888775421 23589999987 6554333 11 111112
Q ss_pred eeEEecCCcEEEEcCc
Q 043369 159 SNQILPNGKIIVVGGR 174 (526)
Q Consensus 159 s~~~L~dG~v~viGG~ 174 (526)
..+--+||+.++++..
T Consensus 476 ~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 476 APAFDADSKNLYYLSY 491 (1045)
T ss_dssp EEEECTTSCEEEEEES
T ss_pred CceEcCCCCEEEEEec
Confidence 3444568886665543
No 228
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=41.39 E-value=3.8e+02 Score=30.16 Aligned_cols=81 Identities=12% Similarity=-0.028 Sum_probs=51.3
Q ss_pred EE-EEeCCCCcEEeCccCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEecC
Q 043369 87 AV-EFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPN 165 (526)
Q Consensus 87 ~~-~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~d 165 (526)
.. +||..+++.+.+. .+.......+.-+||+.++++... ..+.++|.. +.+-... .. .......+.+--+|
T Consensus 360 l~~~~d~~~~~~~~l~-~~~~~~~~~~~SpDG~~la~~~~~---~~v~~~d~~-tg~~~~~--~~-~~~~~v~~~~~SpD 431 (1045)
T 1k32_A 360 FLGIYDYRTGKAEKFE-ENLGNVFAMGVDRNGKFAVVANDR---FEIMTVDLE-TGKPTVI--ER-SREAMITDFTISDN 431 (1045)
T ss_dssp EEEEEETTTCCEEECC-CCCCSEEEEEECTTSSEEEEEETT---SEEEEEETT-TCCEEEE--EE-CSSSCCCCEEECTT
T ss_pred eEEEEECCCCCceEec-CCccceeeeEECCCCCEEEEECCC---CeEEEEECC-CCceEEe--cc-CCCCCccceEECCC
Confidence 44 7799888887776 333334445667899999887653 478899987 6654433 10 11122234455579
Q ss_pred CcEEEEcCcc
Q 043369 166 GKIIVVGGRF 175 (526)
Q Consensus 166 G~v~viGG~~ 175 (526)
|+.++.++.+
T Consensus 432 G~~la~~~~~ 441 (1045)
T 1k32_A 432 SRFIAYGFPL 441 (1045)
T ss_dssp SCEEEEEEEE
T ss_pred CCeEEEEecC
Confidence 9988777653
No 229
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=41.25 E-value=2e+02 Score=27.26 Aligned_cols=75 Identities=9% Similarity=0.017 Sum_probs=43.2
Q ss_pred eEEEEeCCCCcEEeCccCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCC----CcccccceeE
Q 043369 86 HAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGL----ISPRWYASNQ 161 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m----~~~R~y~s~~ 161 (526)
....||+.+++.+........ .+.+..++|++++... ..+.+||+. +.+.... ... ...|. ...+
T Consensus 72 ~i~~~d~~~~~~~~~~~~~~v--~~i~~~~dg~l~v~~~-----~gl~~~d~~-~g~~~~~--~~~~~~~~~~~~-~~i~ 140 (326)
T 2ghs_A 72 ELHELHLASGRKTVHALPFMG--SALAKISDSKQLIASD-----DGLFLRDTA-TGVLTLH--AELESDLPGNRS-NDGR 140 (326)
T ss_dssp EEEEEETTTTEEEEEECSSCE--EEEEEEETTEEEEEET-----TEEEEEETT-TCCEEEE--ECSSTTCTTEEE-EEEE
T ss_pred EEEEEECCCCcEEEEECCCcc--eEEEEeCCCeEEEEEC-----CCEEEEECC-CCcEEEE--eeCCCCCCCCCC-CCEE
Confidence 356789988876654322221 2234557899888652 348899998 7766544 111 11222 2344
Q ss_pred EecCCcEEEE
Q 043369 162 ILPNGKIIVV 171 (526)
Q Consensus 162 ~L~dG~v~vi 171 (526)
.-++|++|+.
T Consensus 141 ~d~~G~l~v~ 150 (326)
T 2ghs_A 141 MHPSGALWIG 150 (326)
T ss_dssp ECTTSCEEEE
T ss_pred ECCCCCEEEE
Confidence 5567888763
No 230
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=40.93 E-value=49 Score=35.91 Aligned_cols=97 Identities=11% Similarity=0.124 Sum_probs=52.8
Q ss_pred cCcEEEEEcCCCCCCCchhhhhhcccccccceEEEEeecCCCCceec-ccCccc-------cccceEEeCCCcEEEEcCc
Q 043369 285 VHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTITAQNPKWEME-EMPLNR-------VMGDMILLPTGDVLIINGA 356 (526)
Q Consensus 285 ~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R-------~~~~~vvLpdG~V~vvGG~ 356 (526)
.+++||++... ..+.++|..+....|+.. ...... .....+++-+++||+....
T Consensus 76 ~~g~vyv~~~~------------------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~d 137 (677)
T 1kb0_A 76 VDGIMYVSASW------------------SVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWD 137 (677)
T ss_dssp ETTEEEEECGG------------------GCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTT
T ss_pred ECCEEEEECCC------------------CeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCC
Confidence 48899987542 135678876545678864 222100 0111234458888875321
Q ss_pred CCCCCCccCCCCCccccEEEeCCCC--cEeecCCCCccccc-cccceecCCCEEEEecCC
Q 043369 357 AKGTAGWGAAREPVLNPVIYCPKIN--RFRILSPSLIPRLY-HSTAHLLSDGRVLVGGSN 413 (526)
Q Consensus 357 ~~g~~g~~~~~~~~~~~e~YDP~t~--~Wt~~a~~~~~R~y-hs~a~LlpdG~V~v~GG~ 413 (526)
. .+..+|.++. .|+.-......+.+ ...+-++.+|+||+..+.
T Consensus 138 g--------------~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~ 183 (677)
T 1kb0_A 138 G--------------RLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGG 183 (677)
T ss_dssp S--------------EEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBC
T ss_pred C--------------EEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecc
Confidence 1 4678999888 58764320111111 222334458999887653
No 231
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=39.62 E-value=3.9e+02 Score=28.71 Aligned_cols=108 Identities=12% Similarity=0.005 Sum_probs=57.4
Q ss_pred EEEecCCeEEEEecccCCCCCccCCCCccccCccccCCCCcceEEEEeCCCCcEEeCccCCccccccceEcCCCcEEEEc
Q 043369 44 MALLPNDRIIAFDRSHFGPSNITLPQGKCIKGVELETSDCYAHAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTG 123 (526)
Q Consensus 44 ~a~l~~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~v~G 123 (526)
.+..||||.+++..... |. -.....++|.++++..+... ........+..+| +-++++
T Consensus 168 ~~~SPDG~~la~~~~~~---------G~-----------e~~~i~v~dl~tg~~~~~~~-~~~~~~~~~wspD-~~l~~~ 225 (741)
T 1yr2_A 168 WAASDDGRLLAYSVQDG---------GS-----------DWRTVKFVGVADGKPLADEL-KWVKFSGLAWLGN-DALLYS 225 (741)
T ss_dssp EEECTTSSEEEEEEEET---------TC-----------SEEEEEEEETTTCCEEEEEE-EEEESCCCEESTT-SEEEEE
T ss_pred EEECCCCCEEEEEEcCC---------CC-----------ceEEEEEEECCCCCCCCccC-CCceeccEEEECC-CEEEEE
Confidence 34567998888876542 11 01356789999998876422 1111134556678 655555
Q ss_pred CCCCC-----------ccEEEEEcCCCCCCcc--cccCCCCCcccccceeEEecCCcEEEEcCcc
Q 043369 124 GYRLG-----------ERVVRYLKPCSDCDWE--EDHQNGLISPRWYASNQILPNGKIIVVGGRF 175 (526)
Q Consensus 124 G~~~g-----------~~~v~~ydp~~t~~W~--~~~~~~m~~~R~y~s~~~L~dG~v~viGG~~ 175 (526)
..... ...+.+++.. +..-. .+ -..-..+++..+...-+||+.+++...+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~v~~~~lg-t~~~~~~lv-~~~~~~~~~~~~~~~SpDG~~l~~~~~~ 288 (741)
T 1yr2_A 226 RFAEPKEGQAFQALNYNQTVWLHRLG-TPQSADQPV-FATPELPKRGHGASVSSDGRWVVITSSE 288 (741)
T ss_dssp ECCCC--------CCCCCEEEEEETT-SCGGGCEEE-ECCTTCTTCEEEEEECTTSCEEEEEEEC
T ss_pred EecCcccccccccCCCCCEEEEEECC-CCchhCEEE-eccCCCCeEEEEEEECCCCCEEEEEEEc
Confidence 43221 2357777765 43311 11 0111123445566666799866665543
No 232
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=39.27 E-value=1.6e+02 Score=28.28 Aligned_cols=54 Identities=7% Similarity=-0.103 Sum_probs=27.9
Q ss_pred eEEEEeCC-CCcEEeCccC---C-ccccccceEcCCCcEEEEcCCCCCccEEEEE--cCCCCCC
Q 043369 86 HAVEFDPI-TRKVRPLTIQ---T-DTWCSSGALLANGVLVQTGGYRLGERVVRYL--KPCSDCD 142 (526)
Q Consensus 86 ~~~~yDp~-t~~w~~~~~~---~-~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~y--dp~~t~~ 142 (526)
...+||.. +++.+.+... . ...-.+.++-+||+.+.+....+ ..+.+| |+. +.+
T Consensus 168 ~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~--~~v~v~~~~~~-~g~ 228 (365)
T 1jof_A 168 KLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAG--NRICEYVIDPA-THM 228 (365)
T ss_dssp EEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTT--TEEEEEEECTT-TCC
T ss_pred EEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCC--CeEEEEEEeCC-CCc
Confidence 46778887 7776543211 1 11122345667997655544322 355665 554 444
No 233
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=38.74 E-value=3.5e+02 Score=28.82 Aligned_cols=113 Identities=6% Similarity=-0.055 Sum_probs=59.4
Q ss_pred cceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCc--------ccccCCCC-CcccccceeEEecCCcEEEEcCccCCeEE
Q 043369 110 SGALLANGVLVQTGGYRLGERVVRYLKPCSDCDW--------EEDHQNGL-ISPRWYASNQILPNGKIIVVGGRFQFTYE 180 (526)
Q Consensus 110 ~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W--------~~~~~~~m-~~~R~y~s~~~L~dG~v~viGG~~~~~~E 180 (526)
..+.-+||+.+++||.+ ..+++||.. ++.- ...+ ..+ ....|=.+++--+|| ++.++.+ .++.
T Consensus 134 svafSPDG~~LAsgs~D---GtVkIWd~~-~~~l~~~~~i~l~ti~-~~~~gh~~~V~sVawSPdg--Laass~D-~tVr 205 (588)
T 2j04_A 134 CFEWNPIESSIVVGNED---GELQFFSIR-KNSENTPEFYFESSIR-LSDAGSKDWVTHIVWYEDV--LVAALSN-NSVF 205 (588)
T ss_dssp EEEECSSSSCEEEEETT---SEEEEEECC-CCTTTCCCCEEEEEEE-CSCTTCCCCEEEEEEETTE--EEEEETT-CCEE
T ss_pred EEEEcCCCCEEEEEcCC---CEEEEEECC-CCccccccceeeeeee-cccccccccEEEEEEcCCc--EEEEeCC-CeEE
Confidence 45566899999999974 579999987 5431 1110 001 112355566667788 6666655 3566
Q ss_pred EE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEE-ccceEEEeccCCeE
Q 043369 181 FI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFA-NDRAILLDYVNNRV 242 (526)
Q Consensus 181 ~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~G-g~~~~~yDp~t~~w 242 (526)
+| ...+.- ...+..+..... . ......+. |++.+.+ +....+||..+++-
T Consensus 206 lWd~~~~~~-~~~~~tL~~~h~--~------~V~svaFs---g~~LASa~~~tIkLWd~~~~~~ 257 (588)
T 2j04_A 206 SMTVSASSH-QPVSRMIQNASR--R------KITDLKIV---DYKVVLTCPGYVHKIDLKNYSI 257 (588)
T ss_dssp EECCCSSSS-CCCEEEEECCCS--S------CCCCEEEE---TTEEEEECSSEEEEEETTTTEE
T ss_pred EEECCCCcc-ccceeeeccccc--C------cEEEEEEE---CCEEEEEeCCeEEEEECCCCeE
Confidence 66 433310 001222210110 0 11222333 4555554 45578999988775
No 234
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=35.57 E-value=3.9e+02 Score=27.55 Aligned_cols=117 Identities=7% Similarity=0.017 Sum_probs=58.5
Q ss_pred CCCcEEEEcCCCCCccEEEEEcCCCCCCc----ccc-cCCCCC--cc-cccceeEEecCCcEEEEc--CccC---CeEEE
Q 043369 115 ANGVLVQTGGYRLGERVVRYLKPCSDCDW----EED-HQNGLI--SP-RWYASNQILPNGKIIVVG--GRFQ---FTYEF 181 (526)
Q Consensus 115 ~~G~l~v~GG~~~g~~~v~~ydp~~t~~W----~~~-~~~~m~--~~-R~y~s~~~L~dG~v~viG--G~~~---~~~E~ 181 (526)
.+++-+++.|.. ...+.+||.. ++.- ... .+.++. .. .+-|+...++|| |||.- +..+ ..+-+
T Consensus 93 ~~r~~l~v~~l~--s~~I~viD~~-t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~v 168 (462)
T 2ece_A 93 IERRFLIVPGLR--SSRIYIIDTK-PNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILM 168 (462)
T ss_dssp CCSCEEEEEBTT--TCCEEEEECC-SCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEE
T ss_pred ccCCEEEEccCC--CCeEEEEECC-CCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEE
Confidence 567777776643 3678999976 4411 111 000111 11 134677888999 88742 2111 24555
Q ss_pred E-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEE---------------------ccceEEEeccC
Q 043369 182 I-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFA---------------------NDRAILLDYVN 239 (526)
Q Consensus 182 y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~G---------------------g~~~~~yDp~t 239 (526)
+ +.+..- ..+|..- .... .--|- .+..+++++++.. ++...+||..+
T Consensus 169 lD~~T~~v-~~~~~~~---~~~~------~~~Yd-~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~ 237 (462)
T 2ece_A 169 LDHYSFEP-LGKWEID---RGDQ------YLAYD-FWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRK 237 (462)
T ss_dssp ECTTTCCE-EEECCSB---CTTC------CCCCC-EEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTT
T ss_pred EECCCCeE-EEEEccC---CCCc------cccce-EEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCC
Confidence 5 554310 0122210 0000 01121 3456788887776 35578899988
Q ss_pred CeEEEec
Q 043369 240 NRVMKNY 246 (526)
Q Consensus 240 ~~w~~~~ 246 (526)
.+..+.+
T Consensus 238 ~k~~~tI 244 (462)
T 2ece_A 238 RKRIHSL 244 (462)
T ss_dssp TEEEEEE
T ss_pred CcEeeEE
Confidence 7655444
No 235
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=33.43 E-value=1.6e+02 Score=27.83 Aligned_cols=90 Identities=9% Similarity=-0.002 Sum_probs=45.9
Q ss_pred EEEEeCCCCcEEeCccC----CccccccceEcC-CCcEEEEcCCC--------------CCccEEEEEcCCCCCCccccc
Q 043369 87 AVEFDPITRKVRPLTIQ----TDTWCSSGALLA-NGVLVQTGGYR--------------LGERVVRYLKPCSDCDWEEDH 147 (526)
Q Consensus 87 ~~~yDp~t~~w~~~~~~----~~~fc~~~~~l~-~G~l~v~GG~~--------------~g~~~v~~ydp~~t~~W~~~~ 147 (526)
...||+.+++.+.+... ...+....++.+ +|+||+.-... .....+.+||+. +.+....
T Consensus 103 i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~-~~~~~~~- 180 (322)
T 2fp8_A 103 LSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPS-TKETTLL- 180 (322)
T ss_dssp EEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETT-TTEEEEE-
T ss_pred EEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCC-CCEEEEe-
Confidence 34577776655444321 112334456677 89999974210 112468889997 5554332
Q ss_pred CCCCCcccccceeEEecCCc-EEEEcCccCCeEEEE
Q 043369 148 QNGLISPRWYASNQILPNGK-IIVVGGRFQFTYEFI 182 (526)
Q Consensus 148 ~~~m~~~R~y~s~~~L~dG~-v~viGG~~~~~~E~y 182 (526)
...+..+ .+.+.-+||+ +||.--. ...+.+|
T Consensus 181 ~~~~~~p---~gia~~~dg~~lyv~d~~-~~~I~~~ 212 (322)
T 2fp8_A 181 LKELHVP---GGAEVSADSSFVLVAEFL-SHQIVKY 212 (322)
T ss_dssp EEEESCC---CEEEECTTSSEEEEEEGG-GTEEEEE
T ss_pred ccCCccC---cceEECCCCCEEEEEeCC-CCeEEEE
Confidence 1122222 2345555776 6665322 2345555
No 236
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=32.09 E-value=3.5e+02 Score=26.53 Aligned_cols=86 Identities=8% Similarity=-0.059 Sum_probs=51.2
Q ss_pred ceEEEEeCC---CCc--EE-eCccCC---------c-cccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCC---Cccc
Q 043369 85 AHAVEFDPI---TRK--VR-PLTIQT---------D-TWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDC---DWEE 145 (526)
Q Consensus 85 ~~~~~yDp~---t~~--w~-~~~~~~---------~-~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~---~W~~ 145 (526)
.....||+. |++ |. .++... . ..|...++-.+|++||++-.. ...+.++||. .. .|..
T Consensus 100 ~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~--~~~I~rV~pd-G~~~~~~~~ 176 (334)
T 2p9w_A 100 SSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALG--MPAIARVSAD-GKTVSTFAW 176 (334)
T ss_dssp CEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEES--SCEEEEECTT-SCCEEEEEE
T ss_pred CEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCC--CCeEEEEeCC-CCEEeeeee
Confidence 567889988 554 32 232111 1 247778888899999986531 1468899997 43 2533
Q ss_pred ccCCCCCcccccceeEEecCCcEEEEcCc
Q 043369 146 DHQNGLISPRWYASNQILPNGKIIVVGGR 174 (526)
Q Consensus 146 ~~~~~m~~~R~y~s~~~L~dG~v~viGG~ 174 (526)
..+ .-.....+-+.+..+||+.+++-..
T Consensus 177 ~~~-~~~~~~G~nGIv~~pdg~~Liv~~~ 204 (334)
T 2p9w_A 177 ESG-NGGQRPGYSGITFDPHSNKLIAFGG 204 (334)
T ss_dssp CCC-CSSSCCSCSEEEEETTTTEEEEESS
T ss_pred cCC-CcccccCcceEEEeCCCCEEEEEcC
Confidence 211 1122234557777778877776543
No 237
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=31.95 E-value=1.3e+02 Score=32.07 Aligned_cols=97 Identities=11% Similarity=0.139 Sum_probs=51.7
Q ss_pred cCcEEEEEcCCCCCCCchhhhhhcccccccceEEEEe-ecCCCCceec-ccCc-----ccc--ccceEEe--CCCc----
Q 043369 285 VHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTI-TAQNPKWEME-EMPL-----NRV--MGDMILL--PTGD---- 349 (526)
Q Consensus 285 ~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~-~~~~~~W~~~-~M~~-----~R~--~~~~vvL--pdG~---- 349 (526)
.+++||++...+ ..+.++|. .+....|+.. .... .++ ....+++ -+|+
T Consensus 61 ~~g~vyv~~~~~-----------------~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~r 123 (599)
T 1w6s_A 61 VDGKMYIHTSFP-----------------NNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPAL 123 (599)
T ss_dssp ETTEEEEECSTT-----------------TCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCE
T ss_pred ECCEEEEEeCCC-----------------CEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeE
Confidence 388999986521 13567887 6555679874 2221 111 0112344 4788
Q ss_pred EEEEcCcCCCCCCccCCCCCccccEEEeCCCC--cEeecCCCCccccccccceecCCCEEEEecC
Q 043369 350 VLIINGAAKGTAGWGAAREPVLNPVIYCPKIN--RFRILSPSLIPRLYHSTAHLLSDGRVLVGGS 412 (526)
Q Consensus 350 V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~--~Wt~~a~~~~~R~yhs~a~LlpdG~V~v~GG 412 (526)
||+..... .+..+|.++. .|+.-..-........++-++.+|+||+..+
T Consensus 124 V~v~t~dg--------------~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~ 174 (599)
T 1w6s_A 124 ILKTQLDG--------------NVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSS 174 (599)
T ss_dssp EEEECTTS--------------EEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCB
T ss_pred EEEEcCCC--------------EEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEec
Confidence 88753211 4578999888 5875322111110111222345899988654
No 238
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=31.25 E-value=3.9e+02 Score=26.23 Aligned_cols=29 Identities=17% Similarity=0.127 Sum_probs=20.8
Q ss_pred CcEEEcccCCccceeEEEEecCCeEEEEec
Q 043369 28 GKWKLLKRSIGVSAMHMALLPNDRIIAFDR 57 (526)
Q Consensus 28 g~W~~~~~~~~v~~~~~a~l~~gkv~~~gg 57 (526)
.+.+.+.. -.-.+.+++.+++|++|+..+
T Consensus 22 ~~~~~va~-gL~~P~~ia~~pdG~llVter 50 (347)
T 3das_A 22 KVLRTVAT-GLNSPWGLAPLPGGDLLVSSR 50 (347)
T ss_dssp EEEEEEEC-CCSSEEEEEECTTSCEEEEET
T ss_pred ceeEEeec-CCCCceEEEEcCCCcEEEEEe
Confidence 45555553 223678999999999999876
No 239
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=31.16 E-value=4.8e+02 Score=27.33 Aligned_cols=81 Identities=15% Similarity=-0.035 Sum_probs=46.9
Q ss_pred eEEEEeCCCCcEEeCccCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCC-----CCcccccCCCCCcccc----
Q 043369 86 HAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSD-----CDWEEDHQNGLISPRW---- 156 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t-----~~W~~~~~~~m~~~R~---- 156 (526)
...+||..+++.+++...... ......-+||+.+++... ..+.++|.. + .+...+ ........
T Consensus 102 ~i~~~d~~~~~~~~l~~~~~~-~~~~~~SpdG~~la~~~~----~~i~v~~~~-~~~~~~g~~~~~--~~~~~~~~~~g~ 173 (706)
T 2z3z_A 102 GLVGFDMLARKVTYLFDTNEE-TASLDFSPVGDRVAYVRN----HNLYIARGG-KLGEGMSRAIAV--TIDGTETLVYGQ 173 (706)
T ss_dssp EEEEEETTTTEEEEEECCTTC-CTTCEECTTSSEEEEEET----TEEEEEECB-CTTSCCCCCEES--CSCCBTTEEESS
T ss_pred EEEEEECCCCceEEccCCccc-ccCCcCCCCCCEEEEEEC----CeEEEEecC-cccccCCCcEEe--ccCCCCCeEccc
Confidence 467789888877666433222 223456789987777532 578888877 5 544433 11111100
Q ss_pred ---------cceeEEecCCcEEEEcCc
Q 043369 157 ---------YASNQILPNGKIIVVGGR 174 (526)
Q Consensus 157 ---------y~s~~~L~dG~v~viGG~ 174 (526)
..+.+--+||+.++.+..
T Consensus 174 ~~~~ee~~~~~~~~~SpDg~~la~~~~ 200 (706)
T 2z3z_A 174 AVHQREFGIEKGTFWSPKGSCLAFYRM 200 (706)
T ss_dssp CCGGGCTTCCCSEEECTTSSEEEEEEE
T ss_pred chhhhhcCCCceEEECCCCCEEEEEEE
Confidence 133444569988887763
No 240
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=30.32 E-value=3.3e+02 Score=28.99 Aligned_cols=110 Identities=15% Similarity=0.114 Sum_probs=61.7
Q ss_pred EEEEecCCeEEEEecccCCCCCccCCCCccccCccccCCCCcceEEEEeCCCCcEEeCccCCccccccceEcCCCcEEEE
Q 043369 43 HMALLPNDRIIAFDRSHFGPSNITLPQGKCIKGVELETSDCYAHAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQT 122 (526)
Q Consensus 43 ~~a~l~~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~v~ 122 (526)
..+..||||.+++.....| . ......++|..+++..+....... ..+.+..+||+.+++
T Consensus 129 ~~~~SPDg~~la~~~~~~G---------~-----------~~~~i~v~d~~tg~~~~~~~~~~~-~~~~~wspDg~~l~~ 187 (710)
T 2xdw_A 129 GYAFSEDGEYFAYGLSASG---------S-----------DWVTIKFMKVDGAKELPDVLERVK-FSCMAWTHDGKGMFY 187 (710)
T ss_dssp EEEECTTSSEEEEEEEETT---------C-----------SCEEEEEEETTTTEEEEEEEEEEC-SCCEEECTTSSEEEE
T ss_pred EEEECCCCCEEEEEEcCCC---------C-----------ceEEEEEEECCCCCCCcccccCcc-cceEEEEeCCCEEEE
Confidence 3445688888877765421 1 012567899999988765322111 223456679987777
Q ss_pred cCCCCC-------------ccEEEEEcCCCCCCcccccC-CCCCcccccceeEEecCCcEEEEcCc
Q 043369 123 GGYRLG-------------ERVVRYLKPCSDCDWEEDHQ-NGLISPRWYASNQILPNGKIIVVGGR 174 (526)
Q Consensus 123 GG~~~g-------------~~~v~~ydp~~t~~W~~~~~-~~m~~~R~y~s~~~L~dG~v~viGG~ 174 (526)
+..... ...+.+++.. +.+...... ..-..+.+..+...-+||+.+++...
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~-t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~ 252 (710)
T 2xdw_A 188 NAYPQQDGKSDGTETSTNLHQKLYYHVLG-TDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIR 252 (710)
T ss_dssp EECCCCSSCCSSSCCCCCCCCEEEEEETT-SCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred EEECCccccccccccccCCCCEEEEEECC-CCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEE
Confidence 654322 2357788876 554321100 01112445556666779987776654
No 241
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=28.38 E-value=2.2e+02 Score=26.78 Aligned_cols=67 Identities=9% Similarity=-0.158 Sum_probs=36.1
Q ss_pred ceEcCCCcEEEEcCCC-C-----C-ccEEEEEcCCCCCCcccccCCCCCcc--cccceeEEecCCcEEEEcCccCCeEEE
Q 043369 111 GALLANGVLVQTGGYR-L-----G-ERVVRYLKPCSDCDWEEDHQNGLISP--RWYASNQILPNGKIIVVGGRFQFTYEF 181 (526)
Q Consensus 111 ~~~l~~G~l~v~GG~~-~-----g-~~~v~~ydp~~t~~W~~~~~~~m~~~--R~y~s~~~L~dG~v~viGG~~~~~~E~ 181 (526)
.+.-.+|+||+.-... . + ...+.+|||. ...-... ..+.. -..++.++..+|++||..-. ...+.+
T Consensus 234 i~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~---~~~~g~~~~~~~~~~~~~g~L~v~~~~-~~~i~~ 308 (322)
T 2fp8_A 234 IKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVI---PLPPPFAGEHFEQIQEHDGLLYIGTLF-HGSVGI 308 (322)
T ss_dssp EEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEE---ECCTTTTTSCCCEEEEETTEEEEECSS-CSEEEE
T ss_pred eEECCCCCEEEEecCcccccccCCCccEEEEECCC-CCEEEEE---ECCCCCccccceEEEEeCCEEEEeecC-CCceEE
Confidence 4556689999875320 0 1 2468899997 4432222 11111 12345555668899876533 344555
Q ss_pred E
Q 043369 182 I 182 (526)
Q Consensus 182 y 182 (526)
|
T Consensus 309 ~ 309 (322)
T 2fp8_A 309 L 309 (322)
T ss_dssp E
T ss_pred E
Confidence 6
No 242
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=28.36 E-value=4.4e+02 Score=28.27 Aligned_cols=111 Identities=10% Similarity=-0.008 Sum_probs=60.9
Q ss_pred EcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEecCCcEEEEcCccCCeEEEE-cCCCCCCCc
Q 043369 113 LLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPNGKIIVVGGRFQFTYEFI-PRTSDSDRK 191 (526)
Q Consensus 113 ~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~dG~v~viGG~~~~~~E~y-P~~~~~~~~ 191 (526)
...+|+|++.||... .+.+|||. +.++.......+.......+...-.+|+|++.. . ...-+| |.++
T Consensus 479 ~d~~g~lWi~~~t~~---Gl~~~d~~-~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt-~--~Gl~~~~~~~~----- 546 (758)
T 3ott_A 479 PDNEGNVWVLLYNNK---GIDKINPR-TREVTKLFADELTGEKSPNYLLCDEDGLLWVGF-H--GGVMRINPKDE----- 546 (758)
T ss_dssp ECTTSCEEEEETTCS---SEEEEETT-TTEEEEECTTTSCGGGCEEEEEECTTSCEEEEE-T--TEEEEECC--C-----
T ss_pred EcCCCCEEEEccCCC---CcEEEeCC-CCceEEecCCCcCCCcccceEEECCCCCEEEEe-c--CceEEEecCCC-----
Confidence 344789998666533 47789998 777766411122211222234444579999643 2 246677 7665
Q ss_pred ceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEccceEEEeccCCeEE
Q 043369 192 ILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDRAILLDYVNNRVM 243 (526)
Q Consensus 192 ~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~~~~~yDp~t~~w~ 243 (526)
....... .. .+.+ .....+..+|+|++...+...+|||++.+..
T Consensus 547 ~~~~~~~--~g-----l~~~-~i~~i~~~~g~lWi~t~~Gl~~~~~~~~~~~ 590 (758)
T 3ott_A 547 SQQSISF--GS-----FSNN-EILSMTCVKNSIWVSTTNGLWIIDRKTMDAR 590 (758)
T ss_dssp CCCBCCC--CC--------C-CEEEEEEETTEEEEEESSCEEEEETTTCCEE
T ss_pred ceEEecc--cC-----CCcc-ceEEEEECCCCEEEECCCCeEEEcCCCceeE
Confidence 2221110 00 0111 1122333589999888777889999998865
No 243
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=28.12 E-value=85 Score=31.49 Aligned_cols=75 Identities=20% Similarity=0.206 Sum_probs=40.8
Q ss_pred ccceEEeCCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCcEeecCCCCccccccccceecCCCEEEEecCCCCCCC
Q 043369 339 MGDMILLPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINRFRILSPSLIPRLYHSTAHLLSDGRVLVGGSNPNVNY 418 (526)
Q Consensus 339 ~~~~vvLpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~Wt~~a~~~~~R~yhs~a~LlpdG~V~v~GG~~~~~~ 418 (526)
.|..++.-||+||..|-...|.-|.+...+....+..-..-.++...++ .-.+|++| |..||+||.-|.+..+..
T Consensus 304 ~ht~alt~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~~l~~~v~~ia----~G~~hs~a-lt~~G~v~~wG~n~~GqL 378 (423)
T 3mvd_K 304 HHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTEKIVSVG----CGEVCSYA-VTIDGKLYSWGSGVNNQL 378 (423)
T ss_dssp SEEEEEETTCCEEEEECCGGGTTCSSSCCSCEEEEEECTTCCSCEEEEE----EETTEEEE-EETTSCEEEEECCTTSCS
T ss_pred CeEEEEeCCCcEEEEECCCCCCCCCCCccccccCceEeccCCCCEEEEE----cCCCeEEE-EcCCCCEEEECCCCCCCC
Confidence 4566667799999999655443332221111112222111111233322 22467755 568999999999877643
No 244
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=27.72 E-value=1.1e+02 Score=29.39 Aligned_cols=58 Identities=12% Similarity=0.059 Sum_probs=30.9
Q ss_pred EEEEeCCCCcEEeCccCCc--c--c-cccceEcCCCcEEEEcCC-----C-CCccEEEEEcCCCCCCccc
Q 043369 87 AVEFDPITRKVRPLTIQTD--T--W-CSSGALLANGVLVQTGGY-----R-LGERVVRYLKPCSDCDWEE 145 (526)
Q Consensus 87 ~~~yDp~t~~w~~~~~~~~--~--f-c~~~~~l~~G~l~v~GG~-----~-~g~~~v~~ydp~~t~~W~~ 145 (526)
..+||+++++.+.+..... . . -.+....+||+.+++.-. . .+...+.++|.. +.+-..
T Consensus 266 l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~-~~~~~~ 334 (388)
T 3pe7_A 266 IYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMK-NGTQHR 334 (388)
T ss_dssp EEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETT-TTEEEE
T ss_pred EEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEecc-CCceEE
Confidence 6789999988766543221 0 0 112345678776554211 1 233578888987 554433
No 245
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=27.33 E-value=4.6e+02 Score=25.90 Aligned_cols=144 Identities=10% Similarity=-0.012 Sum_probs=0.0
Q ss_pred CCeEEEEecccCCCCCccCCCCccccCccccCCCCcceEEEEeCCCCcEEeCccCCccccccc---eEcCCCcEE-----
Q 043369 49 NDRIIAFDRSHFGPSNITLPQGKCIKGVELETSDCYAHAVEFDPITRKVRPLTIQTDTWCSSG---ALLANGVLV----- 120 (526)
Q Consensus 49 ~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~yDp~t~~w~~~~~~~~~fc~~~---~~l~~G~l~----- 120 (526)
+++.++-++.+ ....+||++|++....-..++...... ++-+||+++
T Consensus 192 ~~~~LaSgS~D-------------------------~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~ 246 (356)
T 2w18_A 192 MQEALLGTTIM-------------------------NNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSH 246 (356)
T ss_dssp STTEEEEEETT-------------------------SEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC-
T ss_pred CCceEEEecCC-------------------------CcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEecc
Q ss_pred -------EEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEecCCcE---EEEcCccCCeEEEE-cCCCCCC
Q 043369 121 -------QTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPNGKI---IVVGGRFQFTYEFI-PRTSDSD 189 (526)
Q Consensus 121 -------v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~dG~v---~viGG~~~~~~E~y-P~~~~~~ 189 (526)
+.|+.. ..++++|+. +..-... ..... .-.+....+ +|.. +++.|....++.+| ..++
T Consensus 247 ~~~~w~laSGs~D---~tIklWd~~-tgk~l~v--~~~~~-p~Gh~~~~l-sg~~sg~~lASgS~DgTIkIWDl~tG--- 315 (356)
T 2w18_A 247 PCAKESESLRSPV---FQLIVINPK-TTLSVGV--MLYCL-PPGQAGRFL-EGDVKDHCAAAILTSGTIAIWDLLLG--- 315 (356)
T ss_dssp -----------CC---EEEEEEETT-TTEEEEE--EEECC-CTTCCCCEE-EEEEETTEEEEEETTSCEEEEETTTC---
T ss_pred CCCcceeeccCCC---cEEEEEECC-CCEEEEE--EEeec-cCCCcceeE-ccccCCCEEEEEcCCCcEEEEECCCC---
Q ss_pred CcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEccc--eEEEecc
Q 043369 190 RKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDR--AILLDYV 238 (526)
Q Consensus 190 ~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~~--~~~yDp~ 238 (526)
..+..+....+ .....+.-.|||+.++.|+.+ ..+||..
T Consensus 316 ----k~l~tL~gH~~------~vvs~vafSPDG~~LaSGS~D~TIklWd~~ 356 (356)
T 2w18_A 316 ----QCTALLPPVSD------QHWSFVKWSGTDSHLLAGQKDGNIFVYHYS 356 (356)
T ss_dssp ----SEEEEECCC--------CCCCEEEECSSSSEEEEECTTSCEEEEEEC
T ss_pred ----cEEEEecCCCC------CeEEEEEECCCCCEEEEEECCCcEEEecCC
No 246
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=26.89 E-value=1.9e+02 Score=29.10 Aligned_cols=59 Identities=17% Similarity=0.132 Sum_probs=33.6
Q ss_pred cccceEcC-CCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEecCCc-EEEEc
Q 043369 108 CSSGALLA-NGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPNGK-IIVVG 172 (526)
Q Consensus 108 c~~~~~l~-~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~dG~-v~viG 172 (526)
+.+.++.+ +|.||+.-- +...+.+||+. +..-... ..+....|-...+.-++|+ +|++-
T Consensus 228 p~giavdp~~g~lyv~d~---~~~~V~~~~~~-~~~~~~~--~~~~~~~~P~gia~~pdG~~lyv~d 288 (430)
T 3tc9_A 228 CNGAETHPINGELYFNSW---NAGQVFRYDFT-TQETTPL--FTIQDSGWEFHIQFHPSGNYAYIVV 288 (430)
T ss_dssp CCCEEECTTTCCEEEEET---TTTEEEEEETT-TTEEEEE--EECSSSSCCEEEEECTTSSEEEEEE
T ss_pred ceEEEEeCCCCEEEEEEC---CCCEEEEEECC-CCcEEEE--EEcCCCCcceeEEEcCCCCEEEEEE
Confidence 44555666 799998742 23579999997 5433222 1122112222455566887 88774
No 247
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=25.47 E-value=3.2e+02 Score=25.80 Aligned_cols=54 Identities=13% Similarity=-0.078 Sum_probs=36.7
Q ss_pred eEEEEeCCCCcEEeCccCCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCc
Q 043369 86 HAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDW 143 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W 143 (526)
...++|+.+++.+++...+.........-+||+.+++.... ..+.++|.. +.+-
T Consensus 61 ~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~---~~l~~~d~~-~g~~ 114 (388)
T 3pe7_A 61 NYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG---RNLMRVDLA-TLEE 114 (388)
T ss_dssp EEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT---TEEEEEETT-TCCE
T ss_pred eEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC---CeEEEEECC-CCcc
Confidence 46778999999888875443322234577899877776542 478888887 5543
No 248
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=25.30 E-value=2.8e+02 Score=26.52 Aligned_cols=71 Identities=10% Similarity=0.003 Sum_probs=35.1
Q ss_pred ccce-EcCCCcEEEEcCCCCC---ccEEEEEcCCCCCCcccc---cCCCCCcccccceeEEec---CCcEEEEcCccCCe
Q 043369 109 SSGA-LLANGVLVQTGGYRLG---ERVVRYLKPCSDCDWEED---HQNGLISPRWYASNQILP---NGKIIVVGGRFQFT 178 (526)
Q Consensus 109 ~~~~-~l~~G~l~v~GG~~~g---~~~v~~ydp~~t~~W~~~---~~~~m~~~R~y~s~~~L~---dG~v~viGG~~~~~ 178 (526)
.+.+ .-+||+.+.++..... ...+.+|+...+.+.... -+..-..+++ .+.-+ ||+.+++++.+...
T Consensus 257 ~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~---~a~sp~~~dg~~l~v~~~~~~~ 333 (365)
T 1jof_A 257 ADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHS---NAVSPCPWSDEWMAITDDQEGW 333 (365)
T ss_dssp EEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTC---CCEEECTTCTTEEEEECSSSCE
T ss_pred ccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCccc---ceecCCCcCCCEEEEEEcCCCe
Confidence 3344 5689976555432111 127888876412333221 0001112232 33345 68777777766566
Q ss_pred EEEE
Q 043369 179 YEFI 182 (526)
Q Consensus 179 ~E~y 182 (526)
+.+|
T Consensus 334 v~v~ 337 (365)
T 1jof_A 334 LEIY 337 (365)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7777
No 249
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=25.24 E-value=31 Score=34.16 Aligned_cols=53 Identities=13% Similarity=0.154 Sum_probs=24.5
Q ss_pred eEEEEeecCCCCceecccCccccccceEEeCCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCC--cEee
Q 043369 316 CGRLTITAQNPKWEMEEMPLNRVMGDMILLPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKIN--RFRI 385 (526)
Q Consensus 316 ~~~~d~~~~~~~W~~~~M~~~R~~~~~vvLpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~--~Wt~ 385 (526)
+.++|..+....|+... ...... .+..+|++|+.+..+ | .+.++|+++. .|+.
T Consensus 21 v~a~d~~tG~~~W~~~~---~~~~s~-p~~~~g~~~v~~s~d-g------------~l~a~d~~tG~~~w~~ 75 (369)
T 2hz6_A 21 LHAVSKRTGSIKWTLKE---DPVLQV-PTHVEEPAFLPDPND-G------------SLYTLGSKNNEGLTKL 75 (369)
T ss_dssp EEEEETTTCCEEEEEEC---CCSCCC-C-----CCEEECTTT-C------------CEEEC-----CCSEEC
T ss_pred EEEEECCCCCEEEEecC---CCceec-ceEcCCCEEEEeCCC-C------------EEEEEECCCCceeeee
Confidence 56788765556787643 112222 234688898886533 1 4578888765 4653
No 250
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=24.40 E-value=1.7e+02 Score=27.72 Aligned_cols=50 Identities=22% Similarity=0.285 Sum_probs=28.5
Q ss_pred CCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEecCCcEEEEcCc
Q 043369 115 ANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPNGKIIVVGGR 174 (526)
Q Consensus 115 ~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~dG~v~viGG~ 174 (526)
.||+||..|-...+.-. .|. ...... ..+... .+++++.. ||+||..|-.
T Consensus 196 ~~G~v~~wG~n~~gqlg----~p~--~~~~~v--~~i~~G-~~h~~al~-~g~v~~wG~n 245 (282)
T 3qhy_B 196 KDGKVIAWGDNRYKQTT----VPT--EALSGV--SAIASG-EWYSLALK-NGKVIAWGSS 245 (282)
T ss_dssp ETTEEEEEECCTTSTTC----CCG--GGGSSC--CEEEEC-SSCEEEEE-TTEEEEESTT
T ss_pred ECCeEEEEECCCCCCCC----CCc--ccCCCc--eEEEcC-CCEEEEEE-CCEEEEecCC
Confidence 68999999865432111 121 112222 223323 36777777 9999999853
No 251
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=24.12 E-value=4.3e+02 Score=26.44 Aligned_cols=60 Identities=15% Similarity=0.084 Sum_probs=34.5
Q ss_pred ccccceEcC-CCcEEEEcCCCCCccEEEEEcCCCCCCc-ccccCCCCCcccccceeEEecCCc-EEEEc
Q 043369 107 WCSSGALLA-NGVLVQTGGYRLGERVVRYLKPCSDCDW-EEDHQNGLISPRWYASNQILPNGK-IIVVG 172 (526)
Q Consensus 107 fc~~~~~l~-~G~l~v~GG~~~g~~~v~~ydp~~t~~W-~~~~~~~m~~~R~y~s~~~L~dG~-v~viG 172 (526)
.+.+.++-+ +|.||+.--. ...+.+||+. +.+. ... .......|-...+.-++|+ +|+.=
T Consensus 229 ~P~giavd~~~G~lyv~d~~---~~~V~~~d~~-~g~~~~~~--~~~~~~~~~~~ia~dpdG~~LYvad 291 (433)
T 4hw6_A 229 GAKTCAVHPQNGKIYYTRYH---HAMISSYDPA-TGTLTEEE--VMMDTKGSNFHIVWHPTGDWAYIIY 291 (433)
T ss_dssp SBCCCEECTTTCCEEECBTT---CSEEEEECTT-TCCEEEEE--EECSCCSSCEEEEECTTSSEEEEEE
T ss_pred CCCEEEEeCCCCeEEEEECC---CCEEEEEECC-CCeEEEEE--eccCCCCCcccEEEeCCCCEEEEEe
Confidence 455566677 8999987432 3579999997 5554 221 1111122323456556776 77764
No 252
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=23.88 E-value=7e+02 Score=26.78 Aligned_cols=138 Identities=10% Similarity=-0.006 Sum_probs=67.1
Q ss_pred eEEEEeCCCCcEEeCccCCccccccceEc-C-CCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEe
Q 043369 86 HAVEFDPITRKVRPLTIQTDTWCSSGALL-A-NGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQIL 163 (526)
Q Consensus 86 ~~~~yDp~t~~w~~~~~~~~~fc~~~~~l-~-~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L 163 (526)
...++|+.....+.+... ....+.+.++ + +|.||++--. ....++++++. ...-..+-...+..|+ ++++-
T Consensus 476 ~I~v~d~dg~~~~~l~~~-~~~~P~giavDp~~g~ly~td~~--~~~~I~~~~~d-G~~~~~l~~~~l~~Pn---Glavd 548 (699)
T 1n7d_A 476 TVSVADTKGVKRKTLFRE-QGSKPRAIVVDPVHGFMYWTDWG--TPAKIKKGGLN-GVDIYSLVTENIQWPN---GITLD 548 (699)
T ss_dssp CEEEEBSSSCCEEEECCC-SSCCCCCEECCSSSSCCEECCCS--SSCCEEBCCSS-SCCCCEESCSSCSSCC---CEEEC
T ss_pred eEEEEecCCCceEEEEeC-CCCCcceEEEccCCCcEEEcccC--CCCeEEEEeCC-CCCeeEEEeCCCCCcc---EEEEe
Confidence 356677766544433211 1111223333 3 5788876411 12468888876 3322222011243333 23332
Q ss_pred -cCCcEEEEcCccCCeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEc--cceEEEeccC
Q 043369 164 -PNGKIIVVGGRFQFTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFAN--DRAILLDYVN 239 (526)
Q Consensus 164 -~dG~v~viGG~~~~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg--~~~~~yDp~t 239 (526)
.+++||++=.. ...++++ +.... .-..+... . ...+|....+-.++||+.-. ..+.++|+.+
T Consensus 549 ~~~~~LY~aD~~-~~~I~~~d~dG~~----~~~~~~~~-~--------~~~~P~glavd~~~lywtd~~~~~V~~~d~~~ 614 (699)
T 1n7d_A 549 LLSGRLYWVDSK-LHSISSIDVNGGN----RKTILEDE-K--------RLAHPFSLAVFEDKVFWTDIINEAIFSANRLT 614 (699)
T ss_dssp TTTCCEEEEETT-TTEEEEECSSSSC----CEEECCCS-S--------SCSSCCCCEEETTEEEEECSTTTCEEEEETTT
T ss_pred ccCCEEEEEecC-CCeEEEEccCCCc----eEEEEecC-C--------cCCCceEeEEECCEEEEEeCCCCeEEEEEccC
Confidence 25889987543 2457777 43210 11111110 0 11245555555678988753 4578899887
Q ss_pred CeEEE
Q 043369 240 NRVMK 244 (526)
Q Consensus 240 ~~w~~ 244 (526)
++..+
T Consensus 615 G~~~~ 619 (699)
T 1n7d_A 615 GSDVN 619 (699)
T ss_dssp EEEEE
T ss_pred CCceE
Confidence 77553
No 253
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=23.84 E-value=82 Score=30.37 Aligned_cols=57 Identities=11% Similarity=0.074 Sum_probs=36.3
Q ss_pred EEeCCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCcEeecCCCCcccccccc-ceecCCCEEEEecCCC
Q 043369 343 ILLPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINRFRILSPSLIPRLYHST-AHLLSDGRVLVGGSNP 414 (526)
Q Consensus 343 vvLpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~Wt~~a~~~~~R~yhs~-a~LlpdG~V~v~GG~~ 414 (526)
++=++|+||+..-.. ..+.+|||++.++..+...+ +..+-. ..+-+||++||+....
T Consensus 254 a~d~~G~l~va~~~~-------------~~V~~~d~~~G~~~~~~~~~--~~~~p~~va~~~~g~l~v~~~~~ 311 (343)
T 2qe8_A 254 SIDKDHNIYVGDLAH-------------SAIGVITSADRAYKLLVTDE--KLSWTDSFNFGSDGYLYFDCNQL 311 (343)
T ss_dssp EECTTCCEEEEEGGG-------------TEEEEEETTTTEEEEEEECG--GGSCEEEEEECTTSCEEEEECCG
T ss_pred EECCCCCEEEEccCC-------------CeEEEEECCCCCEEEEEECC--ceecCCeeEECCCCcEEEEeCcc
Confidence 445789999975322 16789999667776655432 332222 3334899999997754
No 254
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=22.83 E-value=4.2e+02 Score=27.80 Aligned_cols=56 Identities=7% Similarity=-0.187 Sum_probs=37.1
Q ss_pred ceEEEEeCCCCcEEeCccCC--ccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCccc
Q 043369 85 AHAVEFDPITRKVRPLTIQT--DTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEE 145 (526)
Q Consensus 85 ~~~~~yDp~t~~w~~~~~~~--~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~ 145 (526)
....+||..+++.+++.... .......+.-+||+.++++.. ..+.++|.. +.+...
T Consensus 91 ~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~----~~i~~~~~~-~g~~~~ 148 (723)
T 1xfd_A 91 GYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE----NNIYYCAHV-GKQAIR 148 (723)
T ss_dssp SEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET----TEEEEESSS-SSCCEE
T ss_pred eeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC----CeEEEEECC-CCceEE
Confidence 45778999998877776432 222334556789988887754 478888887 554443
No 255
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=22.29 E-value=4e+02 Score=25.03 Aligned_cols=61 Identities=7% Similarity=-0.071 Sum_probs=35.1
Q ss_pred ceEEEEeCCCCcEEeCccCCcc----------ccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccc
Q 043369 85 AHAVEFDPITRKVRPLTIQTDT----------WCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEED 146 (526)
Q Consensus 85 ~~~~~yDp~t~~w~~~~~~~~~----------fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~ 146 (526)
....+||+.+++.+.+...... ........+||+.+++.....+...+..+|.. +..++..
T Consensus 320 ~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~-~~~~~~~ 390 (396)
T 3c5m_A 320 PFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVP-ESYKHLE 390 (396)
T ss_dssp CEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECC-TTCC---
T ss_pred CcEEEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEc-ccccccc
Confidence 3567889988876655432221 12234566789776666544445567778876 6655543
No 256
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=21.91 E-value=2.5e+02 Score=27.55 Aligned_cols=89 Identities=10% Similarity=0.065 Sum_probs=44.8
Q ss_pred eEEEEeCCCCc-EEeCcc--CCccccccceEcCCCc-EEEEcCCCCCccEEEEEcCCCCCCcccccCCCCC-ccccccee
Q 043369 86 HAVEFDPITRK-VRPLTI--QTDTWCSSGALLANGV-LVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLI-SPRWYASN 160 (526)
Q Consensus 86 ~~~~yDp~t~~-w~~~~~--~~~~fc~~~~~l~~G~-l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~-~~R~y~s~ 160 (526)
...+||..+.. ..++.. .+..........+++. ++++|+.. ..+.+||.. +.. ... ..+. ....-.++
T Consensus 255 ~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~d---g~v~vwd~~-~~~-~~~--~~~~~h~~~v~~i 327 (430)
T 2xyi_A 255 KLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSAD---KTVALWDLR-NLK-LKL--HSFESHKDEIFQV 327 (430)
T ss_dssp EEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETT---SEEEEEETT-CTT-SCS--EEEECCSSCEEEE
T ss_pred eEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCC---CeEEEEeCC-CCC-CCe--EEeecCCCCEEEE
Confidence 56778887652 111111 1222222234556675 88888763 579999986 421 011 1111 11122234
Q ss_pred EEecCC-cEEEEcCccCCeEEEE
Q 043369 161 QILPNG-KIIVVGGRFQFTYEFI 182 (526)
Q Consensus 161 ~~L~dG-~v~viGG~~~~~~E~y 182 (526)
+.-++| .+++.|+.++ .+.+|
T Consensus 328 ~~sp~~~~~l~s~~~d~-~i~iw 349 (430)
T 2xyi_A 328 QWSPHNETILASSGTDR-RLHVW 349 (430)
T ss_dssp EECSSCTTEEEEEETTS-CCEEE
T ss_pred EECCCCCCEEEEEeCCC-cEEEE
Confidence 444566 5788887664 35555
No 257
>2b4w_A Hypothetical protein, conserved; structural genomics, PSI, protein structure initiative, structural genomics of pathogenic protozoa consortium; 1.98A {Leishmania major} SCOP: b.67.2.5
Probab=21.72 E-value=3.4e+02 Score=26.18 Aligned_cols=97 Identities=14% Similarity=0.128 Sum_probs=52.5
Q ss_pred ecCCeEEEEecccCCC-CCccCCCCccccCccccCCCCcceEEEEeC-CCCcEEeCccC----CccccccceEcCCCcEE
Q 043369 47 LPNDRIIAFDRSHFGP-SNITLPQGKCIKGVELETSDCYAHAVEFDP-ITRKVRPLTIQ----TDTWCSSGALLANGVLV 120 (526)
Q Consensus 47 l~~gkv~~~gg~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~yDp-~t~~w~~~~~~----~~~fc~~~~~l~~G~l~ 120 (526)
.-+||.+|.|+++... +. ..++..|-- ..++|++++.+ .|+|- +-.+|.+
T Consensus 38 ~~~Gk~~I~GRVE~Rd~se-------------------~S~V~fFeet~~d~w~~v~~~~~~LqDPF~----t~I~gEl- 93 (315)
T 2b4w_A 38 SYKGKTHIYGRVEKRDIWA-------------------ASHVRLFEETGKDEFTAVPELSWELEDPYI----AKINNEM- 93 (315)
T ss_dssp EETTEEEEEEEEECTTCSS-------------------CCEEEEEEEEETTEEEECTTCCBSCEEEEE----EEETTEE-
T ss_pred eECCEEEEEeeeecCCCcc-------------------ccEEEEEEEcCCCceEECCCCEEEecCccE----EEECCEE-
Confidence 3599999999997321 10 135666654 67899988753 35542 2345655
Q ss_pred EEcCCC---CC---cc-EEEEEc--CCCCCCcccccCCCCCcccccceeEEecCCcEEEEc
Q 043369 121 QTGGYR---LG---ER-VVRYLK--PCSDCDWEEDHQNGLISPRWYASNQILPNGKIIVVG 172 (526)
Q Consensus 121 v~GG~~---~g---~~-~v~~yd--p~~t~~W~~~~~~~m~~~R~y~s~~~L~dG~v~viG 172 (526)
++||-. +. +. ....|. +..-..+... |..|..=| .+.|.||+|-|.-
T Consensus 94 i~GGveV~~~~~~~l~wrt~FYrG~~~~L~~F~~G-Pd~MKDIR----lveL~DGrIgVfT 149 (315)
T 2b4w_A 94 IFGGTRVRKNGNAILSYYGYFYRGTPDELTYFTRG-PGCMKDIR----VLQLQDGRLGVFS 149 (315)
T ss_dssp EEEEEEEC-----CCCEEEEEEEEETTEEEEEEEC-CTTCCCCE----EEECTTSCEEEEE
T ss_pred EeeeEEEEeCCCCeeEEEEEEEccChHHeeeeccC-CcccceeE----EEEecCCeEeeee
Confidence 556631 00 11 111111 0000112223 34687777 6789999998874
No 258
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=20.60 E-value=3.5e+02 Score=28.33 Aligned_cols=89 Identities=12% Similarity=0.105 Sum_probs=47.9
Q ss_pred cEeecCCCCccccccccceecCCCEEEEecCCCCCCCCcCCCCCCceeeEEEcCcccCCCCCCCCCeeeecCCCCcccee
Q 043369 382 RFRILSPSLIPRLYHSTAHLLSDGRVLVGGSNPNVNYNFSALFPTELSLQAFYPPYFNLMSNRSRPSISTVKPGAFLKLK 461 (526)
Q Consensus 382 ~Wt~~a~~~~~R~yhs~a~LlpdG~V~v~GG~~~~~~~~~~~~p~~~~vE~y~Ppyl~~~~~~~RP~i~~~~p~~~~~~~ 461 (526)
+|+....+.......+..+.++||+|+++.-.. . ......|.+..|... .-| . .. |. .++.
T Consensus 310 tW~~~~~l~~~~~~Y~~l~~~~dg~i~~~ye~~-~----------~i~~~~~~~~~l~~~---~~~-~-~~-~~--~~~~ 370 (601)
T 1w8o_A 310 TWPVSKVFQPGSMSYSTLTALPDGTYGLLYEPG-T----------GIRYANFNLAWLGGI---CAP-F-TI-PD--VALE 370 (601)
T ss_dssp CCCEEEEEEEEECCCEEEEECTTSCEEEEECCS-S----------EEEEEEECHHHHTBC---SCC-E-EC-CC--EEEC
T ss_pred CCCCceEeCCCCCCCCeEEEcCCCeEEEEEecC-C----------cceEEEecHHHhccc---cCC-C-cC-cc--ceec
Confidence 787543222122223445557999999885422 1 345567777777643 122 2 33 31 6678
Q ss_pred cCCeEEEEEEeccCC---cceEEEEEeecCc
Q 043369 462 YTENFLLGFKLRSGD---LGEIFVTMVAPSF 489 (526)
Q Consensus 462 ~g~~~~v~~~~~~~~---~~~~~v~l~~~~~ 489 (526)
.|++++|+++...+. ....+++|..+..
T Consensus 371 ~g~~~~~~~~vtn~~~~~~~~~~~~~~~~~~ 401 (601)
T 1w8o_A 371 PGQQVTVPVAVTNQSGIAVPKPSLQLDASPD 401 (601)
T ss_dssp TTCEEEEEEEEECCSSSCBSSCEEEEECCTT
T ss_pred CCceeEEEEEEECCCceeccCceEEEecCCC
Confidence 898888876644321 1224666655433
Done!