BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043370
(430 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
[Vitis vinifera]
Length = 657
Score = 666 bits (1719), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/444 (72%), Positives = 371/444 (83%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE +LV SSLAHMYMK GSL EGE++IR MP +NV+AW TLIAG+AQNG E+VLDQY
Sbjct: 214 GFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQY 273
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
N+M+M GFRPDKITFVSVISSCSELATLGQGQQIHAEV+KAGASL V VISSLISMYSRC
Sbjct: 274 NMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRC 333
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
GCL+ S+K FLECE DVV WSSMIAAYGFHG+G EAI+LF QMEQ++ EANDVTF+SLL
Sbjct: 334 GCLEYSLKVFLECENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLL 393
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
YACSHCGLKEKG++FFDLMV+KY KPRLEHYTC+VDLLGR G ++EA ALIR+MPVKA+
Sbjct: 394 YACSHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKAD 453
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
I WKTLLSACK HK T+MA RI+EE+ ++P+D PYVLLSNIHAS KRW VS+ R+A
Sbjct: 454 VITWKTLLSACKIHKKTEMARRISEEVFRLDPRDPVPYVLLSNIHASDKRWDDVSDVRKA 513
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
MR+R +KKEPG+SWLE+KNQ+HQF MGDKSHP+S+EI YL ELTSEMK RGYVPD +
Sbjct: 514 MRDRKLKKEPGISWLEVKNQIHQFCMGDKSHPKSVEIASYLRELTSEMKKRGYVPDIDSV 573
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA----------EHTRGLIVM----LPFKYISEIKNR 406
+HDMD E+KEY+L HHSEKLAIAFA + L V + KYISEI NR
Sbjct: 574 LHDMDVEDKEYSLVHHSEKLAIAFALLYTPVGTPIRVIKNLRVCSDCHVAIKYISEISNR 633
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EIIVRD+SRFHHF+NG+CSCGDYW
Sbjct: 634 EIIVRDSSRFHHFKNGRCSCGDYW 657
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 134/271 (49%), Gaps = 6/271 (2%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
++++ + L + Y +SG V K+ MP RNV W ++AG Q E+ L ++ M
Sbjct: 117 NIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRMN 176
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+GF PD+ SV+ C+ L L G+Q+H V K G ++ V+SSL MY +CG L
Sbjct: 177 ELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLG 236
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ + +VV W+++IA +G EE ++ + M+ F + +TFVS++ +CS
Sbjct: 237 EGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCS 296
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
+G + ++K + + ++ + RCG L+ + + + + W
Sbjct: 297 ELATLGQGQQIHAEVIKA-GASLIVSVISSLISMYSRCGCLEYSLKVFLECE-NGDVVCW 354
Query: 245 KTLLSACKTH----KSTDMAGRIAEEILGVN 271
++++A H ++ D+ ++ +E L N
Sbjct: 355 SSMIAAYGFHGRGVEAIDLFNQMEQEKLEAN 385
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 89/211 (42%), Gaps = 41/211 (19%)
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV------- 127
F ++ SC +L G+Q+H+ ++ +G S D + + L+++YS+CG LD ++
Sbjct: 55 FSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMP 114
Query: 128 ------------------------KTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQ 163
K F E +V W++M+A EE + LF +
Sbjct: 115 RKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSR 174
Query: 164 MEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLG--- 220
M + F ++ S+L C+ G + V Y RK E VV L
Sbjct: 175 MNELGFLPDEFALGSVLRGCAGLRALVAGRQ-----VHGYVRKCGFEFNLVVVSSLAHMY 229
Query: 221 -RCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+CG L E LIR MP + N + W TL++
Sbjct: 230 MKCGSLGEGERLIRAMPSQ-NVVAWNTLIAG 259
>gi|449438512|ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
gi|449526872|ref|XP_004170437.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
Length = 667
Score = 642 bits (1657), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/444 (68%), Positives = 365/444 (82%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFEL V GSSLAHMY+KSGSL +GEK+I+ MPIR V+AW TLIAGKAQNG E+VL+QY
Sbjct: 224 GFELSSVVGSSLAHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQY 283
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
N+M+M GFRPDKITFVSV+S+CSELATLGQGQQIHAEV+KAGAS + V+SSLISMYSR
Sbjct: 284 NMMKMAGFRPDKITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRS 343
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
GCL+DS+K F++ E DVVLWSSMIAAYGFHG+GEEA+ LF QME + EAN+VTF+SLL
Sbjct: 344 GCLEDSIKAFVDRENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLL 403
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
YACSH GLKEKG E+FDLMVKKY+ KPR+EHYTCVVDLLGR G L+EA +IR+MPV+ +
Sbjct: 404 YACSHSGLKEKGTEYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPD 463
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
IIWKTLL+ACK HK +MA RI+EEI+ ++P DAA YVLLSNIHASA+ W VS+ R+A
Sbjct: 464 GIIWKTLLAACKLHKEAEMAERISEEIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKA 523
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
MR+R+V+KEPG+SWLE+KN VHQF+MGDKSHP+ EIDLYL+EL SE+K GYVP+ G+
Sbjct: 524 MRDRSVRKEPGISWLELKNLVHQFSMGDKSHPQYFEIDLYLKELMSELKQHGYVPELGSV 583
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVML--------------PFKYISEIKNR 406
+HDMD+EEKEYNL HHSEK AIAFA V + K IS I+NR
Sbjct: 584 LHDMDNEEKEYNLAHHSEKFAIAFALMNTSENVPIRVMKNLRVCDDCHNAIKCISRIRNR 643
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EIIVRDASRFHHF++G+CSCG+YW
Sbjct: 644 EIIVRDASRFHHFKDGECSCGNYW 667
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 120/245 (48%), Gaps = 6/245 (2%)
Query: 12 LAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPD 71
L + Y++ G L +K+ M RN+ W +IAG Q + L + M +GF PD
Sbjct: 134 LINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQALSLFKEMYGLGFLPD 193
Query: 72 KITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFL 131
+ T SV+ C+ L +L GQ++HA ++K G L V SSL MY + G L D K
Sbjct: 194 EFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGSLSDGEKLIK 253
Query: 132 ECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEK 191
VV W+++IA +G EE +N + M+ F + +TFVS+L ACS +
Sbjct: 254 SMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSACSELATLGQ 313
Query: 192 GMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN--AIIWKTLLS 249
G + ++K L + ++ + R G L+++ I+ + N ++W ++++
Sbjct: 314 GQQIHAEVIKA-GASSVLAVVSSLISMYSRSGCLEDS---IKAFVDRENFDVVLWSSMIA 369
Query: 250 ACKTH 254
A H
Sbjct: 370 AYGFH 374
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 93/217 (42%), Gaps = 45/217 (20%)
Query: 71 DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV--- 127
D F ++ SC +L +L G+Q+H+ ++ +G S D + + L++ YS+ G S+
Sbjct: 61 DPSLFSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSLVLF 120
Query: 128 ----------------------------KTFLECEYSDVVLWSSMIAAYGFHGKGEEAIN 159
K F E ++ W++MIA ++A++
Sbjct: 121 SNMPRRNVMSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQALS 180
Query: 160 LFEQMEQKEFEANDVTFVSLLYACSHCGLKE--KGMEFFDLMVKKYRRKPRLEHYTCVVD 217
LF++M F ++ T S+L C+ GL+ G E ++ K E + V
Sbjct: 181 LFKEMYGLGFLPDEFTLGSVLRGCA--GLRSLLAGQEVHACLL-----KCGFELSSVVGS 233
Query: 218 LLG----RCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
L + G L + LI++MP++ + W TL++
Sbjct: 234 SLAHMYIKSGSLSDGEKLIKSMPIRT-VVAWNTLIAG 269
>gi|224138422|ref|XP_002322810.1| predicted protein [Populus trichocarpa]
gi|222867440|gb|EEF04571.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 638 bits (1646), Expect = e-180, Method: Compositional matrix adjust.
Identities = 314/449 (69%), Positives = 360/449 (80%), Gaps = 24/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+E +LV GSSLAHMYMKSGSL EGEKVI+ M IRNV+AW TLIAG AQNG E VLD Y
Sbjct: 119 GYEFNLVVGSSLAHMYMKSGSLGEGEKVIKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLY 178
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
N+M+M G RPDKIT VSVISS +ELATL QGQQIHAE +KAGA+ V V+SSLISMYS+C
Sbjct: 179 NMMKMSGLRPDKITLVSVISSSAELATLFQGQQIHAEAIKAGANSAVAVLSSLISMYSKC 238
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
GCL+DS+K L+CE+ D VLWSSMIAAYGFHG+GEEA++LFEQMEQ+ NDVTF+SLL
Sbjct: 239 GCLEDSMKALLDCEHPDSVLWSSMIAAYGFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLL 298
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
YACSH GLKEKGM FF LMV+KY KPRLEHYTCVVDLLGR G LDEA A+IR+MP++A+
Sbjct: 299 YACSHNGLKEKGMGFFKLMVEKYGLKPRLEHYTCVVDLLGRSGCLDEAEAMIRSMPLEAD 358
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+IWKTLLSAC+ H++ DMA R AEEIL +NPQD+A YVLLSNIHASAKRW+ VS+ R
Sbjct: 359 VVIWKTLLSACRIHRNADMATRTAEEILRLNPQDSATYVLLSNIHASAKRWKDVSKVRTT 418
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
MR+RNVKKEPGVSWLE+KN+V QF+MGDKSHP S EIDLYL+EL EMKLRGYVPDT
Sbjct: 419 MRDRNVKKEPGVSWLEVKNRVFQFSMGDKSHPMSEEIDLYLKELMEEMKLRGYVPDTATV 478
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
HD DSEEKE +L +HSEKLAIAF GL+ + P K IS
Sbjct: 479 FHDTDSEEKENSLVNHSEKLAIAF-----GLMNIPPGSPIRVMKNLRICSDCHVAIKLIS 533
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+I NREIIVRD SRFHHF++GKCSCGDYW
Sbjct: 534 DINNREIIVRDTSRFHHFKHGKCSCGDYW 562
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 140/296 (47%), Gaps = 4/296 (1%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
++++ + L + +++ G L KV M RNV W +++G Q E+ L + M
Sbjct: 22 NIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFREMH 81
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+GF PD+ T SV+ C+ L G+Q+HA V+K G ++ V SSL MY + G L
Sbjct: 82 ELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSLG 141
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ K +VV W+++IA +G E ++L+ M+ + +T VS++ + +
Sbjct: 142 EGEKVIKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSA 201
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
+G + +K + + ++ + +CG L+++ + + ++++W
Sbjct: 202 ELATLFQGQQIHAEAIKAGANSA-VAVLSSLISMYSKCGCLEDSMKALLDCE-HPDSVLW 259
Query: 245 KTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
++++A H + A + E++ G+ D LL + + +G+ F+
Sbjct: 260 SSMIAAYGFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFK 315
>gi|356528130|ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Glycine max]
Length = 674
Score = 600 bits (1547), Expect = e-169, Method: Compositional matrix adjust.
Identities = 297/444 (66%), Positives = 363/444 (81%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE +LV G SLAHMYMK+GS+ +GE+VI MP +++AW TL++GKAQ G E VLDQY
Sbjct: 231 GFECNLVVGCSLAHMYMKAGSMHDGERVINWMPDCSLVAWNTLMSGKAQKGYFEGVLDQY 290
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+M+M GFRPDKITFVSVISSCSELA L QG+QIHAE VKAGAS +V V+SSL+SMYSRC
Sbjct: 291 CMMKMAGFRPDKITFVSVISSCSELAILCQGKQIHAEAVKAGASSEVSVVSSLVSMYSRC 350
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
GCL DS+KTFLEC+ DVVLWSSMIAAYGFHG+GEEAI LF +MEQ+ N++TF+SLL
Sbjct: 351 GCLQDSIKTFLECKERDVVLWSSMIAAYGFHGQGEEAIKLFNEMEQENLPGNEITFLSLL 410
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
YACSHCGLK+KG+ FD+MVKKY K RL+HYTC+VDLLGR G L+EA A+IR+MPVKA+
Sbjct: 411 YACSHCGLKDKGLGLFDMMVKKYGLKARLQHYTCLVDLLGRSGCLEEAEAMIRSMPVKAD 470
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
AIIWKTLLSACK HK+ ++A R+A+E+L ++PQD+A YVLL+NI++SA RWQ VSE R A
Sbjct: 471 AIIWKTLLSACKIHKNAEIARRVADEVLRIDPQDSASYVLLANIYSSANRWQNVSEVRRA 530
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+++ VKKEPG+SW+E+KNQVHQF MGD+ HP+ +EI+ YLEELTSE+K +GYVPDT +
Sbjct: 531 MKDKMVKKEPGISWVEVKNQVHQFHMGDECHPKHVEINQYLEELTSEIKRQGYVPDTSSV 590
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVM------------LPFKYISEIKNR 406
+HDMD+EEKE L+HHSEKLAIAFA G+ + + KYISEIK
Sbjct: 591 LHDMDNEEKEQILRHHSEKLAIAFALMNTPEGVPIRVMKNLRVCSDCHVAIKYISEIKKL 650
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EIIVRD+SRFHHF+NG CSCGDYW
Sbjct: 651 EIIVRDSSRFHHFKNGTCSCGDYW 674
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 119/252 (47%), Gaps = 2/252 (0%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y+ G+L + + MP RNV W ++ G + + E+ L ++ M + F PD+ +
Sbjct: 145 YLGMGNLESAKNLFDEMPDRNVATWNAMVTGLTKFEMNEEALLLFSRMNELSFMPDEYSL 204
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
SV+ C+ L L GQQ+HA V+K G ++ V SL MY + G + D +
Sbjct: 205 GSVLRGCAHLGALLAGQQVHAYVMKCGFECNLVVGCSLAHMYMKAGSMHDGERVINWMPD 264
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
+V W+++++ G E ++ + M+ F + +TFVS++ +CS + +G +
Sbjct: 265 CSLVAWNTLMSGKAQKGYFEGVLDQYCMMKMAGFRPDKITFVSVISSCSELAILCQGKQI 324
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK 255
VK + +V + RCG L ++ + + ++W ++++A H
Sbjct: 325 HAEAVKAGASSEVSVVSS-LVSMYSRCGCLQDSIKTFLECKER-DVVLWSSMIAAYGFHG 382
Query: 256 STDMAGRIAEEI 267
+ A ++ E+
Sbjct: 383 QGEEAIKLFNEM 394
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 65/125 (52%), Gaps = 4/125 (3%)
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
F +++ +C L ++ G+Q+H+ + +G S D + + L+++YS+ G L +V F
Sbjct: 72 FSNLLQACIPLKSVSLGKQLHSLIFTSGCSSDKFISNHLLNLYSKFGELQAAVALFDRMP 131
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGME 194
+++ + MI AY G E A NLF++M + N T+ +++ + + E+ +
Sbjct: 132 RRNIMSCNIMIKAYLGMGNLESAKNLFDEMPDR----NVATWNAMVTGLTKFEMNEEALL 187
Query: 195 FFDLM 199
F M
Sbjct: 188 LFSRM 192
>gi|218546768|sp|Q8S9M4.2|PP198_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g41080
Length = 650
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 278/451 (61%), Positives = 341/451 (75%), Gaps = 27/451 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G ELDLV SSLAHMYM++G L +GE VIR MP+RN++AW TLI G AQNG E VL Y
Sbjct: 206 GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLY 265
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+M++ G RP+KITFV+V+SSCS+LA GQGQQIHAE +K GAS V V+SSLISMYS+C
Sbjct: 266 KMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKC 325
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM-EQKEFEANDVTFVSL 179
GCL D+ K F E E D V+WSSMI+AYGFHG+G+EAI LF M EQ E N+V F++L
Sbjct: 326 GCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNL 385
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
LYACSH GLK+KG+E FD+MV+KY KP L+HYTCVVDLLGR G LD+A A+IR+MP+K
Sbjct: 386 LYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKT 445
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
+ +IWKTLLSAC HK+ +MA R+ +EIL ++P D+A YVLL+N+HASAKRW+ VSE R+
Sbjct: 446 DIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRK 505
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
+MR++NVKKE G+SW E K +VHQF MGD+S +S EI YL+ELT EMKL+GY PDT +
Sbjct: 506 SMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTAS 565
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP--------------------FKY 399
+HDMD EEKE +L HSEKLA+AFA +++LP FKY
Sbjct: 566 VLHDMDEEEKESDLVQHSEKLAVAFA------LMILPEGAPIRIIKNLRVCSDCHVAFKY 619
Query: 400 ISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
IS IKNREI +RD SRFHHF NGKCSCGDYW
Sbjct: 620 ISVIKNREITLRDGSRFHHFINGKCSCGDYW 650
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 124/256 (48%), Gaps = 2/256 (0%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
+ ++ + L + Y+++G LV KV MP R + W +IAG Q E+ L + M
Sbjct: 109 NYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMH 168
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+GF PD+ T SV S + L ++ GQQIH +K G LD+ V SSL MY R G L
Sbjct: 169 GLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQ 228
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D ++V W+++I +G E + L++ M+ N +TFV++L +CS
Sbjct: 229 DGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCS 288
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
++ +G + + K + + ++ + +CG L +AA + ++W
Sbjct: 289 DLAIRGQGQQIHAEAI-KIGASSVVAVVSSLISMYSKCGCLGDAAKAFSERE-DEDEVMW 346
Query: 245 KTLLSACKTHKSTDMA 260
+++SA H D A
Sbjct: 347 SSMISAYGFHGQGDEA 362
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 104/261 (39%), Gaps = 35/261 (13%)
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS---------------- 118
F I SC+ +L G+Q+H +V +G S D + + L+SMYS
Sbjct: 47 FTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAVYGRMR 106
Query: 119 ---------------RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQ 163
R G L ++ K F E + W++MIA EE ++LF +
Sbjct: 107 KKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFRE 166
Query: 164 MEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCG 223
M F ++ T S+ + G + + KY + L + + + R G
Sbjct: 167 MHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTI-KYGLELDLVVNSSLAHMYMRNG 225
Query: 224 YLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAE--EILGVNPQDAAPYVLL 281
L + +IR+MPV+ N + W TL+ + + + + +I G P +L
Sbjct: 226 KLQDGEIVIRSMPVR-NLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVL 284
Query: 282 SNIHASAKRWQGVSEFREAMR 302
S+ A R QG EA++
Sbjct: 285 SSCSDLAIRGQGQQIHAEAIK 305
>gi|30688521|ref|NP_850342.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|18491267|gb|AAL69458.1| At2g41080/T3K9.15 [Arabidopsis thaliana]
gi|330254831|gb|AEC09925.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 565
Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust.
Identities = 278/451 (61%), Positives = 341/451 (75%), Gaps = 27/451 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G ELDLV SSLAHMYM++G L +GE VIR MP+RN++AW TLI G AQNG E VL Y
Sbjct: 121 GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLY 180
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+M++ G RP+KITFV+V+SSCS+LA GQGQQIHAE +K GAS V V+SSLISMYS+C
Sbjct: 181 KMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKC 240
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM-EQKEFEANDVTFVSL 179
GCL D+ K F E E D V+WSSMI+AYGFHG+G+EAI LF M EQ E N+V F++L
Sbjct: 241 GCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNL 300
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
LYACSH GLK+KG+E FD+MV+KY KP L+HYTCVVDLLGR G LD+A A+IR+MP+K
Sbjct: 301 LYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKT 360
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
+ +IWKTLLSAC HK+ +MA R+ +EIL ++P D+A YVLL+N+HASAKRW+ VSE R+
Sbjct: 361 DIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRK 420
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
+MR++NVKKE G+SW E K +VHQF MGD+S +S EI YL+ELT EMKL+GY PDT +
Sbjct: 421 SMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTAS 480
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP--------------------FKY 399
+HDMD EEKE +L HSEKLA+AFA +++LP FKY
Sbjct: 481 VLHDMDEEEKESDLVQHSEKLAVAFA------LMILPEGAPIRIIKNLRVCSDCHVAFKY 534
Query: 400 ISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
IS IKNREI +RD SRFHHF NGKCSCGDYW
Sbjct: 535 ISVIKNREITLRDGSRFHHFINGKCSCGDYW 565
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 124/256 (48%), Gaps = 2/256 (0%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
+ ++ + L + Y+++G LV KV MP R + W +IAG Q E+ L + M
Sbjct: 24 NYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMH 83
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+GF PD+ T SV S + L ++ GQQIH +K G LD+ V SSL MY R G L
Sbjct: 84 GLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQ 143
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D ++V W+++I +G E + L++ M+ N +TFV++L +CS
Sbjct: 144 DGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCS 203
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
++ +G + + K + + ++ + +CG L +AA + ++W
Sbjct: 204 DLAIRGQGQQIHAEAI-KIGASSVVAVVSSLISMYSKCGCLGDAAKAFSERE-DEDEVMW 261
Query: 245 KTLLSACKTHKSTDMA 260
+++SA H D A
Sbjct: 262 SSMISAYGFHGQGDEA 277
>gi|3402709|gb|AAD12003.1| hypothetical protein [Arabidopsis thaliana]
Length = 563
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 278/451 (61%), Positives = 341/451 (75%), Gaps = 27/451 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G ELDLV SSLAHMYM++G L +GE VIR MP+RN++AW TLI G AQNG E VL Y
Sbjct: 119 GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLY 178
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+M++ G RP+KITFV+V+SSCS+LA GQGQQIHAE +K GAS V V+SSLISMYS+C
Sbjct: 179 KMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKC 238
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM-EQKEFEANDVTFVSL 179
GCL D+ K F E E D V+WSSMI+AYGFHG+G+EAI LF M EQ E N+V F++L
Sbjct: 239 GCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNL 298
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
LYACSH GLK+KG+E FD+MV+KY KP L+HYTCVVDLLGR G LD+A A+IR+MP+K
Sbjct: 299 LYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKT 358
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
+ +IWKTLLSAC HK+ +MA R+ +EIL ++P D+A YVLL+N+HASAKRW+ VSE R+
Sbjct: 359 DIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRK 418
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
+MR++NVKKE G+SW E K +VHQF MGD+S +S EI YL+ELT EMKL+GY PDT +
Sbjct: 419 SMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTAS 478
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP--------------------FKY 399
+HDMD EEKE +L HSEKLA+AFA +++LP FKY
Sbjct: 479 VLHDMDEEEKESDLVQHSEKLAVAFA------LMILPEGAPIRIIKNLRVCSDCHVAFKY 532
Query: 400 ISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
IS IKNREI +RD SRFHHF NGKCSCGDYW
Sbjct: 533 ISVIKNREITLRDGSRFHHFINGKCSCGDYW 563
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 124/256 (48%), Gaps = 2/256 (0%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
+ ++ + L + Y+++G LV KV MP R + W +IAG Q E+ L + M
Sbjct: 22 NYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMH 81
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+GF PD+ T SV S + L ++ GQQIH +K G LD+ V SSL MY R G L
Sbjct: 82 GLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQ 141
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D ++V W+++I +G E + L++ M+ N +TFV++L +CS
Sbjct: 142 DGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCS 201
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
++ +G + + K + + ++ + +CG L +AA + ++W
Sbjct: 202 DLAIRGQGQQIHAEAI-KIGASSVVAVVSSLISMYSKCGCLGDAAKAFSERE-DEDEVMW 259
Query: 245 KTLLSACKTHKSTDMA 260
+++SA H D A
Sbjct: 260 SSMISAYGFHGQGDEA 275
>gi|297824049|ref|XP_002879907.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325746|gb|EFH56166.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 565
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 276/451 (61%), Positives = 341/451 (75%), Gaps = 27/451 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G ELDLV SSLAHMYM++G L +GE VIR MP+RN++AW TLI G AQNG E VL Y
Sbjct: 121 GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLY 180
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+M++ G RP+KITFV+V+SSCS+LA GQGQQIHAE +K GAS V V+SSLISMYS+C
Sbjct: 181 KMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKC 240
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM-EQKEFEANDVTFVSL 179
GCL D+ K F E E D V+WSSMI+AYGFHG+G+EAI LF M EQ E E N+V F++L
Sbjct: 241 GCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIKLFNSMAEQTEMEVNEVAFLNL 300
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
LYACSH GLK+KG+E FD+MV+KY KP L+HYTCVVDLLGR G LD+A A+I++MP+K
Sbjct: 301 LYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIKSMPIKP 360
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
+ +IWKTLLSAC HK+ +MA ++ +EIL ++P D+A YVLL+N+HASAKRW+ VSE R+
Sbjct: 361 DPVIWKTLLSACNIHKNAEMAQKVFKEILEIDPNDSACYVLLANVHASAKRWRDVSEVRK 420
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
+MR++NVKKE G+SW E K +VHQF MGD+S +S EI YL+ELT EMKL+GY PDT +
Sbjct: 421 SMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTAS 480
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP--------------------FKY 399
+HDMD EEKE +L HSEKLA+AFA +++LP FKY
Sbjct: 481 VLHDMDEEEKESDLVQHSEKLAVAFA------LMILPEGAPIRIIKNLRVCSDCHVAFKY 534
Query: 400 ISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
IS I NREI +RD SRFHHF NGKCSCGDYW
Sbjct: 535 ISVIMNREITLRDGSRFHHFINGKCSCGDYW 565
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 126/259 (48%), Gaps = 2/259 (0%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
+ ++ + L + Y+++G LV KV MP R + W +IAG Q E+ L + M
Sbjct: 24 NFMSSNILINGYVRAGDLVSARKVFDEMPDRKLTTWNAMIAGLIQFEYNEEGLSLFREMH 83
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+GF PD+ T SV S + L ++ GQQIH +K G LD+ V SSL MY R G L
Sbjct: 84 GLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYAIKYGLELDLVVNSSLAHMYMRNGKLQ 143
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D ++V W+++I +G E + L++ M+ N +TFV++L +CS
Sbjct: 144 DGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCS 203
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
++ +G + + K + + ++ + +CG L +AA + ++W
Sbjct: 204 DLAIRGQGQQIHAEAI-KIGASSVVAVVSSLISMYSKCGCLGDAAKAFSERE-DEDEVMW 261
Query: 245 KTLLSACKTHKSTDMAGRI 263
+++SA H D A ++
Sbjct: 262 SSMISAYGFHGQGDEAIKL 280
>gi|357125908|ref|XP_003564631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Brachypodium distachyon]
Length = 647
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 244/444 (54%), Positives = 321/444 (72%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + D+ G+SLAHMYM+ G L EGE V+R +P ++++ T IAG+ QNG +E L+ +
Sbjct: 204 GMDSDMCVGNSLAHMYMRCGCLAEGEAVLRALPSLTIVSFNTTIAGRTQNGDSEGALEYF 263
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
++MR V PD +TFVS IS CS+LA L QGQQ+HA+V+KAG V VI+SL+ MYSRC
Sbjct: 264 SMMRGVEVAPDVVTFVSAISCCSDLAALAQGQQVHAQVIKAGVDKVVPVITSLVHMYSRC 323
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
GCL DS + + D+ L S+MI+A GFHG+G +A+ LF+QM E N+VTF++LL
Sbjct: 324 GCLGDSERVYDGYCGLDLFLLSAMISACGFHGQGHKAVELFKQMMNGGAEPNEVTFLALL 383
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
YACSH GLK++G+EFF+LM K Y +P ++HY C+VDLLGR G LDEA ALI +MPV+A+
Sbjct: 384 YACSHSGLKDEGLEFFELMTKTYGFQPSVKHYNCIVDLLGRSGCLDEAEALILSMPVRAD 443
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+IWKTLLSACKT K+ DMA RIAE ++ +P+D+APYVLLSNI A++KRW V+E R+
Sbjct: 444 GVIWKTLLSACKTQKNFDMAERIAERVIESDPRDSAPYVLLSNIRATSKRWGDVTEVRKI 503
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
MRE++++KEPGVSW+E K QVHQF GDKSHPR EID YL+E+ +++ GY PD
Sbjct: 504 MREKDIRKEPGVSWVEHKGQVHQFCTGDKSHPRQGEIDEYLKEMMGKIRQCGYAPDMTMV 563
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVM------------LPFKYISEIKNR 406
HDM+ EEKE +L HHSEKLAIAFA G+ + + K IS++ R
Sbjct: 564 FHDMEDEEKEVSLTHHSEKLAIAFAFLNLPEGVPIRVMKNLRVCDDCHVAIKLISQVTGR 623
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EI+VRD SRFHHFR+G+CSCGDYW
Sbjct: 624 EIVVRDVSRFHHFRDGRCSCGDYW 647
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 132/287 (45%), Gaps = 5/287 (1%)
Query: 17 MKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFV 76
+K+G L ++ MP RNV W ++AG GL ED L + MR G PD+
Sbjct: 119 IKNGDLGSARELFDKMPTRNVATWNAMVAGLTNVGLDEDSLQFFLAMRREGMHPDEFGLG 178
Query: 77 SVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYS 136
SV C+ L + G+Q+HA VV++G D+ V +SL MY RCGCL +
Sbjct: 179 SVFRCCAGLLDVVSGRQVHAYVVRSGMDSDMCVGNSLAHMYMRCGCLAEGEAVLRALPSL 238
Query: 137 DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFF 196
+V +++ IA +G E A+ F M E + VTFVS + CS +G +
Sbjct: 239 TIVSFNTTIAGRTQNGDSEGALEYFSMMRGVEVAPDVVTFVSAISCCSDLAALAQGQQVH 298
Query: 197 DLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKS 256
++K K + T +V + RCG L ++ + + + + ++SAC H
Sbjct: 299 AQVIKAGVDKV-VPVITSLVHMYSRCGCLGDSER-VYDGYCGLDLFLLSAMISACGFHGQ 356
Query: 257 TDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
A + ++++ G P + LL S + +G+ EF E M
Sbjct: 357 GHKAVELFKQMMNGGAEPNEVTFLALLYACSHSGLKDEGL-EFFELM 402
>gi|115456187|ref|NP_001051694.1| Os03g0816600 [Oryza sativa Japonica Group]
gi|113550165|dbj|BAF13608.1| Os03g0816600, partial [Oryza sativa Japonica Group]
Length = 708
Score = 503 bits (1295), Expect = e-140, Method: Compositional matrix adjust.
Identities = 243/444 (54%), Positives = 319/444 (71%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + D+ GSSLAHMYM+ G L EGE V+R++P ++++ T+IAG+ QNG +E L+ +
Sbjct: 265 GLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYF 324
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+MR VG D +TFVS ISSCS+LA L QGQQIH +V+KAG V V++ L+ MYSRC
Sbjct: 325 CMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRC 384
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
GCL DS + F SD L S+MI+AYGFHG G++AI LF+QM E +DVTF++LL
Sbjct: 385 GCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALL 444
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
YACSH GLKE+GM+ F+LM K Y +P ++HYTCVVDLLGR G LDEA ALI +MP+ +
Sbjct: 445 YACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPD 504
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+IWKTLLSACKT K+ DMA RIA+ ++ ++P D+A YVLLSNI A+++RW VSE R+A
Sbjct: 505 GVIWKTLLSACKTQKNFDMAERIAKRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRKA 564
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
MR+ NV+KEPGVSW+E+K +HQF GD+SHPR EID LEE+ ++++ GY PD
Sbjct: 565 MRDNNVRKEPGVSWVELKGHIHQFCTGDESHPRQKEIDECLEEMMAKIRQCGYSPDMSMV 624
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVM------------LPFKYISEIKNR 406
+HDM+ EEKE +L HHSEKLAIAFA G+ + L K +S++ R
Sbjct: 625 LHDMEDEEKEVSLSHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHLAIKLMSQVTGR 684
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EI+VRD SRFHHF++G+CSC DYW
Sbjct: 685 EIVVRDVSRFHHFKDGRCSCRDYW 708
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 130/284 (45%), Gaps = 4/284 (1%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y+K+G L K+ MP RNV W ++AG G E+ L + MR G PD+
Sbjct: 179 YIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGL 238
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
SV C+ L + G+Q+HA VV++G D+ V SSL MY RCGCL +
Sbjct: 239 GSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPS 298
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
+V +++IA +G E A+ F M A+ VTFVS + +CS +G +
Sbjct: 299 LSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQI 358
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK 255
++K K + TC+V + RCG L ++ + ++ + ++SA H
Sbjct: 359 HGQVMKAGVDKV-VPVMTCLVHMYSRCGCLGDSERVFFGY-CGSDTFLLSAMISAYGFHG 416
Query: 256 STDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEF 297
A + ++++ G P D LL S + +G+ F
Sbjct: 417 HGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCF 460
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 59/139 (42%), Gaps = 13/139 (9%)
Query: 113 LISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEAN 172
L Y + G L + K F E +V W++M+A G EE++ F M ++ +
Sbjct: 175 LFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPD 234
Query: 173 DVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLG----RCGYLDEA 228
+ S+ C+ GL++ V Y + L+ CV L RCG L E
Sbjct: 235 EFGLGSVFRCCA--GLRDV---VTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEG 289
Query: 229 AALIRNMP----VKANAII 243
A++R +P V N II
Sbjct: 290 EAVLRMLPSLSIVSCNTII 308
>gi|108711755|gb|ABF99550.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215697380|dbj|BAG91374.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 646
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 243/444 (54%), Positives = 319/444 (71%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + D+ GSSLAHMYM+ G L EGE V+R++P ++++ T+IAG+ QNG +E L+ +
Sbjct: 203 GLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYF 262
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+MR VG D +TFVS ISSCS+LA L QGQQIH +V+KAG V V++ L+ MYSRC
Sbjct: 263 CMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRC 322
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
GCL DS + F SD L S+MI+AYGFHG G++AI LF+QM E +DVTF++LL
Sbjct: 323 GCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALL 382
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
YACSH GLKE+GM+ F+LM K Y +P ++HYTCVVDLLGR G LDEA ALI +MP+ +
Sbjct: 383 YACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPD 442
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+IWKTLLSACKT K+ DMA RIA+ ++ ++P D+A YVLLSNI A+++RW VSE R+A
Sbjct: 443 GVIWKTLLSACKTQKNFDMAERIAKRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRKA 502
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
MR+ NV+KEPGVSW+E+K +HQF GD+SHPR EID LEE+ ++++ GY PD
Sbjct: 503 MRDNNVRKEPGVSWVELKGHIHQFCTGDESHPRQKEIDECLEEMMAKIRQCGYSPDMSMV 562
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVM------------LPFKYISEIKNR 406
+HDM+ EEKE +L HHSEKLAIAFA G+ + L K +S++ R
Sbjct: 563 LHDMEDEEKEVSLSHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHLAIKLMSQVTGR 622
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EI+VRD SRFHHF++G+CSC DYW
Sbjct: 623 EIVVRDVSRFHHFKDGRCSCRDYW 646
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 130/284 (45%), Gaps = 4/284 (1%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y+K+G L K+ MP RNV W ++AG G E+ L + MR G PD+
Sbjct: 117 YIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGL 176
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
SV C+ L + G+Q+HA VV++G D+ V SSL MY RCGCL +
Sbjct: 177 GSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPS 236
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
+V +++IA +G E A+ F M A+ VTFVS + +CS +G +
Sbjct: 237 LSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQI 296
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK 255
++K K + TC+V + RCG L ++ + ++ + ++SA H
Sbjct: 297 HGQVMKAGVDKV-VPVMTCLVHMYSRCGCLGDSERVFFGY-CGSDTFLLSAMISAYGFHG 354
Query: 256 STDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEF 297
A + ++++ G P D LL S + +G+ F
Sbjct: 355 HGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCF 398
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 59/139 (42%), Gaps = 13/139 (9%)
Query: 113 LISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEAN 172
L Y + G L + K F E +V W++M+A G EE++ F M ++ +
Sbjct: 113 LFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPD 172
Query: 173 DVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLG----RCGYLDEA 228
+ S+ C+ GL++ V Y + L+ CV L RCG L E
Sbjct: 173 EFGLGSVFRCCA--GLRDV---VTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEG 227
Query: 229 AALIRNMP----VKANAII 243
A++R +P V N II
Sbjct: 228 EAVLRMLPSLSIVSCNTII 246
>gi|212720716|ref|NP_001132746.1| uncharacterized protein LOC100194233 [Zea mays]
gi|194695290|gb|ACF81729.1| unknown [Zea mays]
Length = 539
Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust.
Identities = 237/444 (53%), Positives = 313/444 (70%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + D+ GSSLAHMYM+ G L +GE +R +P N+++ T I+G+ QNG AE L+ +
Sbjct: 96 GLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFF 155
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
LMR G + +TFVS ++SCS+LA L QGQQIHA +K G V V++SL+ MYSRC
Sbjct: 156 CLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRC 215
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
GCL DS + LE +D+VL S+MI+AYGFHG G++A+ LF+QM E N+VTF++LL
Sbjct: 216 GCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLL 275
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
YACSH GLK++GM F+LM K Y +P ++HYTC+VDLLGR G L+EA LI +MPV+ +
Sbjct: 276 YACSHSGLKDEGMNCFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPD 335
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+IWKTLLSACKT K DMA RIAE ++ ++P D+A YVLLSNI A++ RW+ VS+ RE
Sbjct: 336 GVIWKTLLSACKTQKKFDMAERIAERVIELDPHDSASYVLLSNIRATSSRWEDVSKVRET 395
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
MRE+NV+KEPGVSW+E+K Q+HQF GD+SH R EI LEE+ + ++ GY PD
Sbjct: 396 MREQNVRKEPGVSWVELKGQIHQFCTGDESHSRQREIVECLEEMMTRIRQCGYAPDMSMV 455
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVM------------LPFKYISEIKNR 406
HDM+ EEKE +L HHSEKLAIAFA G+ + + K +S++ R
Sbjct: 456 FHDMEDEEKEVSLAHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHVAIKLMSKVIGR 515
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EI+VRD SRFHHF++GKCSCGDYW
Sbjct: 516 EIVVRDVSRFHHFKDGKCSCGDYW 539
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 133/284 (46%), Gaps = 4/284 (1%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y+K+G L K+ MP RNV W ++AG +GL E+ L + MR G +PD+
Sbjct: 10 YVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPDEYGL 69
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
S+ C+ L + G+Q+HA VV++G D+ V SSL MY RCG L D
Sbjct: 70 GSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPS 129
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
++V ++ I+ +G E A+ F M EAN VTFVS + +CS +G +
Sbjct: 130 LNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQI 189
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK 255
L +K K + T +V + RCG L ++ + + ++ ++SA H
Sbjct: 190 HALAIKTGVDKV-VPVMTSLVHMYSRCGCLGDSERVCLEYS-GTDLVLCSAMISAYGFHG 247
Query: 256 STDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEF 297
A + ++++ G P + LL S + +G++ F
Sbjct: 248 HGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCF 291
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 10/142 (7%)
Query: 113 LISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEAN 172
LI Y + G L+ + K F E +V W++M+A G EE++ F M ++ + +
Sbjct: 6 LIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPD 65
Query: 173 DVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLG----RCGYLDEA 228
+ SL C+ GL++ V Y + L+ CV L RCG+L +
Sbjct: 66 EYGLGSLFRCCA--GLRDV---VSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDG 120
Query: 229 AALIRNMPVKANAIIWKTLLSA 250
A +R +P N + T +S
Sbjct: 121 EAALRALP-SLNIVSCNTTISG 141
>gi|414872095|tpg|DAA50652.1| TPA: hypothetical protein ZEAMMB73_776700 [Zea mays]
Length = 647
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 237/444 (53%), Positives = 313/444 (70%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + D+ GSSLAHMYM+ G L +GE +R +P N+++ T I+G+ QNG AE L+ +
Sbjct: 204 GLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFF 263
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
LMR G + +TFVS ++SCS+LA L QGQQIHA +K G V V++SL+ MYSRC
Sbjct: 264 CLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRC 323
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
GCL DS + LE +D+VL S+MI+AYGFHG G++A+ LF+QM E N+VTF++LL
Sbjct: 324 GCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLL 383
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
YACSH GLK++GM F+LM K Y +P ++HYTC+VDLLGR G L+EA LI +MPV+ +
Sbjct: 384 YACSHSGLKDEGMNCFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPD 443
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+IWKTLLSACKT K DMA RIAE ++ ++P D+A YVLLSNI A++ RW+ VS+ RE
Sbjct: 444 GVIWKTLLSACKTQKKFDMAERIAERVIELDPHDSASYVLLSNIRATSSRWEDVSKVRET 503
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
MRE+NV+KEPGVSW+E+K Q+HQF GD+SH R EI LEE+ + ++ GY PD
Sbjct: 504 MREQNVRKEPGVSWVELKGQIHQFCTGDESHSRQREIVECLEEMMTRIRQCGYAPDMSMV 563
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVM------------LPFKYISEIKNR 406
HDM+ EEKE +L HHSEKLAIAFA G+ + + K +S++ R
Sbjct: 564 FHDMEDEEKEVSLAHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHVAIKLMSKVIGR 623
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EI+VRD SRFHHF++GKCSCGDYW
Sbjct: 624 EIVVRDVSRFHHFKDGKCSCGDYW 647
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 133/284 (46%), Gaps = 4/284 (1%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y+K+G L K+ MP RNV W ++AG +GL E+ L + MR G +PD+
Sbjct: 118 YVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPDEYGL 177
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
S+ C+ L + G+Q+HA VV++G D+ V SSL MY RCG L D
Sbjct: 178 GSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPS 237
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
++V ++ I+ +G E A+ F M EAN VTFVS + +CS +G +
Sbjct: 238 LNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQI 297
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK 255
L +K K + T +V + RCG L ++ + + ++ ++SA H
Sbjct: 298 HALAIKTGVDKV-VPVMTSLVHMYSRCGCLGDSERVCLEYS-GTDLVLCSAMISAYGFHG 355
Query: 256 STDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEF 297
A + ++++ G P + LL S + +G++ F
Sbjct: 356 HGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCF 399
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 14/144 (9%)
Query: 113 LISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEAN 172
LI Y + G L+ + K F E +V W++M+A G EE++ F M ++ + +
Sbjct: 114 LIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPD 173
Query: 173 DVTFVSLLYACSHCGLKE--KGMEFFDLMVKKYRRKPRLEHYTCVVDLLG----RCGYLD 226
+ SL C+ GL++ G + V Y + L+ CV L RCG+L
Sbjct: 174 EYGLGSLFRCCA--GLRDVVSGRQ-----VHAYVVRSGLDRDMCVGSSLAHMYMRCGFLR 226
Query: 227 EAAALIRNMPVKANAIIWKTLLSA 250
+ A +R +P N + T +S
Sbjct: 227 DGEAALRALP-SLNIVSCNTTISG 249
>gi|28876027|gb|AAO60036.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 704
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 230/426 (53%), Positives = 303/426 (71%), Gaps = 14/426 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + D+ GSSLAHMYM+ G L EGE V+R++P ++++ T+IAG+ QNG +E L+ +
Sbjct: 269 GLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYF 328
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+MR VG D +TFVS ISSCS+LA L QGQQIH +V+KAG V V++ L+ MYSRC
Sbjct: 329 CMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRC 388
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
GCL DS + F SD L S+MI+AYGFHG G++AI LF+QM E +DVTF++LL
Sbjct: 389 GCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALL 448
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
YACSH GLKE+GM+ F+LM K Y +P ++HYTCVVDLLGR G LDEA ALI +MP+ +
Sbjct: 449 YACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPD 508
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+IWKTLLSACKT K+ DMA RIA+ ++ ++P D+A YVLLSNI A+++RW VSE R+A
Sbjct: 509 GVIWKTLLSACKTQKNFDMAERIAKRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRKA 568
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
MR+ NV+KEPGVSW+E+K +HQF GD+SHPR EID LEE+ ++++ GY PD
Sbjct: 569 MRDNNVRKEPGVSWVELKGHIHQFCTGDESHPRQKEIDECLEEMMAKIRQCGYSPDMSMV 628
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVM------------LPFKYISEIKNR 406
+HDM+ EEKE +L HHSEKLAIAFA G+ + L K +S++ R
Sbjct: 629 LHDMEDEEKEVSLSHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHLAIKLMSQVTGR 688
Query: 407 EIIVRD 412
EI+VRD
Sbjct: 689 EIVVRD 694
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 130/284 (45%), Gaps = 4/284 (1%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y+K+G L K+ MP RNV W ++AG G E+ L + MR G PD+
Sbjct: 183 YIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGL 242
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
SV C+ L + G+Q+HA VV++G D+ V SSL MY RCGCL +
Sbjct: 243 GSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPS 302
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
+V +++IA +G E A+ F M A+ VTFVS + +CS +G +
Sbjct: 303 LSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQI 362
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK 255
++K K + TC+V + RCG L ++ + ++ + ++SA H
Sbjct: 363 HGQVMKAGVDKV-VPVMTCLVHMYSRCGCLGDSERVFFGY-CGSDTFLLSAMISAYGFHG 420
Query: 256 STDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEF 297
A + ++++ G P D LL S + +G+ F
Sbjct: 421 HGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCF 464
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 81/207 (39%), Gaps = 45/207 (21%)
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
F + +C L L +Q+HA +GA+ D + L+ Y+ G L + + F
Sbjct: 113 FSHLFRACRALRPL---RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIP 169
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGME 194
+V+ W+ + Y +G A LF++M ++ N T+ +++ ++ G E+ +
Sbjct: 170 RRNVMSWNILFGGYIKNGDLGGARKLFDEMPER----NVATWNAMVAGLTNLGFDEESLG 225
Query: 195 FFDLM------------------------------VKKYRRKPRLEHYTCVVDLLG---- 220
FF M V Y + L+ CV L
Sbjct: 226 FFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYM 285
Query: 221 RCGYLDEAAALIRNMP----VKANAII 243
RCG L E A++R +P V N II
Sbjct: 286 RCGCLQEGEAVLRMLPSLSIVSCNTII 312
>gi|222626043|gb|EEE60175.1| hypothetical protein OsJ_13106 [Oryza sativa Japonica Group]
Length = 628
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 220/385 (57%), Positives = 287/385 (74%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + D+ GSSLAHMYM+ G L EGE V+R++P ++++ T+IAG+ QNG +E L+ +
Sbjct: 203 GLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYF 262
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+MR VG D +TFVS ISSCS+LA L QGQQIH +V+KAG V V++ L+ MYSRC
Sbjct: 263 CMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRC 322
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
GCL DS + F SD L S+MI+AYGFHG G++AI LF+QM E +DVTF++LL
Sbjct: 323 GCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALL 382
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
YACSH GLKE+GM+ F+LM K Y +P ++HYTCVVDLLGR G LDEA ALI +MP+ +
Sbjct: 383 YACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPD 442
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+IWKTLLSACKT K+ DMA RIA+ ++ ++P D+A YVLLSNI A+++RW VSE R+A
Sbjct: 443 GVIWKTLLSACKTQKNFDMAERIAKRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRKA 502
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
MR+ NV+KEPGVSW+E+K +HQF GD+SHPR EID LEE+ ++++ GY PD
Sbjct: 503 MRDNNVRKEPGVSWVELKGHIHQFCTGDESHPRQKEIDECLEEMMAKIRQCGYSPDMSMV 562
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA 385
+HDM+ EEKE +L HHSEKLAIAFA
Sbjct: 563 LHDMEDEEKEVSLSHHSEKLAIAFA 587
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 130/284 (45%), Gaps = 4/284 (1%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y+K+G L K+ MP RNV W ++AG G E+ L + MR G PD+
Sbjct: 117 YIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGL 176
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
SV C+ L + G+Q+HA VV++G D+ V SSL MY RCGCL +
Sbjct: 177 GSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPS 236
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
+V +++IA +G E A+ F M A+ VTFVS + +CS +G +
Sbjct: 237 LSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQI 296
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK 255
++K K + TC+V + RCG L ++ + ++ + ++SA H
Sbjct: 297 HGQVMKAGVDKV-VPVMTCLVHMYSRCGCLGDSERVFFGY-CGSDTFLLSAMISAYGFHG 354
Query: 256 STDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEF 297
A + ++++ G P D LL S + +G+ F
Sbjct: 355 HGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCF 398
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 59/139 (42%), Gaps = 13/139 (9%)
Query: 113 LISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEAN 172
L Y + G L + K F E +V W++M+A G EE++ F M ++ +
Sbjct: 113 LFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPD 172
Query: 173 DVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLG----RCGYLDEA 228
+ S+ C+ GL++ V Y + L+ CV L RCG L E
Sbjct: 173 EFGLGSVFRCCA--GLRDV---VTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEG 227
Query: 229 AALIRNMP----VKANAII 243
A++R +P V N II
Sbjct: 228 EAVLRMLPSLSIVSCNTII 246
>gi|218193985|gb|EEC76412.1| hypothetical protein OsI_14066 [Oryza sativa Indica Group]
Length = 628
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/385 (57%), Positives = 287/385 (74%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + D+ GSSLAHMYM+ G L EGE V+R++P ++++ T+IAG+ QNG +E L+ +
Sbjct: 203 GLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYF 262
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+MR VG D +TFVS ISSCS+LA L QGQQIH +V+KAG V V++ L+ MYSRC
Sbjct: 263 CMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRC 322
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
GCL DS + F SD L S+MI+AYGFHG G++AI LF+QM E +DVTF++LL
Sbjct: 323 GCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALL 382
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
YACSH GLKE+GM+ F+LM K Y +P ++HYTCVVDLLGR G LDEA ALI +MP+ +
Sbjct: 383 YACSHSGLKEEGMDCFELMTKTYGIQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPD 442
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+IWKTLLSACKT K+ DMA RIA+ ++ ++P D+A YVLLSNI A+++RW VSE R+A
Sbjct: 443 GVIWKTLLSACKTQKNFDMAERIAKRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRKA 502
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
MR+ NV+KEPGVSW+E+K +HQF GD+SHPR EID LEE+ ++++ GY PD
Sbjct: 503 MRDNNVRKEPGVSWVELKGHIHQFCTGDESHPRQKEIDECLEEMMAKIRQCGYSPDMSMV 562
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA 385
+HDM+ EEKE +L HHSEKLAIAFA
Sbjct: 563 LHDMEDEEKEVSLSHHSEKLAIAFA 587
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 130/284 (45%), Gaps = 4/284 (1%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y+K+G L K+ MP RNV W ++AG G E+ L + MR G PD+
Sbjct: 117 YIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGLFLDMRREGMHPDEFGL 176
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
SV C+ L + G+Q+HA VV++G D+ V SSL MY RCGCL +
Sbjct: 177 GSVSRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPS 236
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
+V +++IA +G E A+ F M A+ VTFVS + +CS +G +
Sbjct: 237 LSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQI 296
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK 255
++K K + TC+V + RCG L ++ + ++ + ++SA H
Sbjct: 297 HGQVMKAGVDKV-VPVMTCLVHMYSRCGCLGDSERVFFGY-CGSDTFLLSAMISAYGFHG 354
Query: 256 STDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEF 297
A + ++++ G P D LL S + +G+ F
Sbjct: 355 HGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCF 398
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 60/139 (43%), Gaps = 13/139 (9%)
Query: 113 LISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEAN 172
L Y + G L + K F E +V W++M+A G EE++ LF M ++ +
Sbjct: 113 LFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGLFLDMRREGMHPD 172
Query: 173 DVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLG----RCGYLDEA 228
+ S+ C+ GL++ V Y + L+ CV L RCG L E
Sbjct: 173 EFGLGSVSRCCA--GLRDV---VTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEG 227
Query: 229 AALIRNMP----VKANAII 243
A++R +P V N II
Sbjct: 228 EAVLRMLPSLSIVSCNTII 246
>gi|302143464|emb|CBI22025.3| unnamed protein product [Vitis vinifera]
Length = 489
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 210/274 (76%), Positives = 241/274 (87%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE +LV SSLAHMYMK GSL EGE++IR MP +NV+AW TLIAG+AQNG E+VLDQY
Sbjct: 214 GFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQY 273
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
N+M+M GFRPDKITFVSVISSCSELATLGQGQQIHAEV+KAGASL V VISSLISMYSRC
Sbjct: 274 NMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRC 333
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
GCL+ S+K FLECE DVV WSSMIAAYGFHG+G EAI+LF QMEQ++ EANDVTF+SLL
Sbjct: 334 GCLEYSLKVFLECENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLL 393
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
YACSHCGLKEKG++FFDLMV+KY KPRLEHYTC+VDLLGR G ++EA ALIR+MPVKA+
Sbjct: 394 YACSHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKAD 453
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQD 274
I WKTLLSACK HK T+MA RI+EE+ ++P+D
Sbjct: 454 VITWKTLLSACKIHKKTEMARRISEEVFRLDPRD 487
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 134/271 (49%), Gaps = 6/271 (2%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
++++ + L + Y +SG V K+ MP RNV W ++AG Q E+ L ++ M
Sbjct: 117 NIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRMN 176
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+GF PD+ SV+ C+ L L G+Q+H V K G ++ V+SSL MY +CG L
Sbjct: 177 ELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLG 236
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ + +VV W+++IA +G EE ++ + M+ F + +TFVS++ +CS
Sbjct: 237 EGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCS 296
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
+G + ++K + + ++ + RCG L+ + + + + W
Sbjct: 297 ELATLGQGQQIHAEVIKA-GASLIVSVISSLISMYSRCGCLEYSLKVFLECE-NGDVVCW 354
Query: 245 KTLLSACKTH----KSTDMAGRIAEEILGVN 271
++++A H ++ D+ ++ +E L N
Sbjct: 355 SSMIAAYGFHGRGVEAIDLFNQMEQEKLEAN 385
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 89/211 (42%), Gaps = 41/211 (19%)
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV------- 127
F ++ SC +L G+Q+H+ ++ +G S D + + L+++YS+CG LD ++
Sbjct: 55 FSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMP 114
Query: 128 ------------------------KTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQ 163
K F E +V W++M+A EE + LF +
Sbjct: 115 RKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSR 174
Query: 164 MEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLG--- 220
M + F ++ S+L C+ G + V Y RK E VV L
Sbjct: 175 MNELGFLPDEFALGSVLRGCAGLRALVAGRQ-----VHGYVRKCGFEFNLVVVSSLAHMY 229
Query: 221 -RCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+CG L E LIR MP + N + W TL++
Sbjct: 230 MKCGSLGEGERLIRAMPSQ-NVVAWNTLIAG 259
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/480 (41%), Positives = 291/480 (60%), Gaps = 55/480 (11%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEG----------------------------EKVIRL- 31
GFE D+V ++L HMY + GSL + +K ++L
Sbjct: 40 GFESDVVVQTALVHMYARCGSLEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLF 99
Query: 32 --MPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLG 89
M R+V++W +IAG AQNG ++ L+ +N MR G + D+ SV+S+C++LA L
Sbjct: 100 YEMSERDVVSWTAVIAGYAQNGYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALE 159
Query: 90 QGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYG 149
G+Q HA VV++G +LD+ V S+L+ MY++ G ++D+ + F + + V W+S+I
Sbjct: 160 LGRQFHAYVVQSGFALDIVVGSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCA 219
Query: 150 FHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRL 209
HG+G +A+ LFEQM Q + N+++FV +L ACSH GL +G +F+LM + Y P +
Sbjct: 220 QHGRGNDAVLLFEQMLQAGIKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDV 279
Query: 210 EHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILG 269
HYTC++DLLGR G LDEA I MPV+ + +W LL AC+ H +T++A RIAE +LG
Sbjct: 280 SHYTCMIDLLGRAGCLDEAENFINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLG 339
Query: 270 VNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDK 329
+ Q A YVLLSNI+A+A +W ++ R+ M++R V K+PG SW+E+K +H F G+
Sbjct: 340 MEVQIAGIYVLLSNIYAAAGQWDDAAKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGET 399
Query: 330 SHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFAEHTR 389
SHP+ EI +LE L+ +MK GYVP+ + D++ +EKE +L HHSEKLAIAF
Sbjct: 400 SHPQLKEIHEFLESLSRKMKAAGYVPNKNFVLQDVEDDEKELSLSHHSEKLAIAF----- 454
Query: 390 GLIVMLP-------------------FKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
G+I P K+IS R+I+VRDA+RFHHF++G+CSCGDYW
Sbjct: 455 GIINTNPGTTIRVAKNLRVCGDCHTVIKFISLNFTRKIVVRDANRFHHFKDGRCSCGDYW 514
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 125/249 (50%), Gaps = 35/249 (14%)
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
G +P++ T +V+ +C+ +A+L QG+Q H ++K G DV V ++L+ MY+RCG L+D+
Sbjct: 5 GVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDA 64
Query: 127 -------------------------------VKTFLECEYSDVVLWSSMIAAYGFHGKGE 155
+K F E DVV W+++IA Y +G G+
Sbjct: 65 GHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGD 124
Query: 156 EAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV 215
E++N+F QM + +++ S+L AC+ E G +F +V+ + + +
Sbjct: 125 ESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQS-GFALDIVVGSAL 183
Query: 216 VDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQ 273
VD+ + G +++A + MP + N + W ++++ C H + A + E++L G+ P
Sbjct: 184 VDMYAKSGSMEDACQVFDKMPQR-NEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPN 242
Query: 274 DAAPYVLLS 282
+ + +LS
Sbjct: 243 EISFVGVLS 251
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/450 (42%), Positives = 281/450 (62%), Gaps = 25/450 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF DL S + MY+K G + ++ + + +AW T+I+G +NG + L Y
Sbjct: 1129 GFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVY 1188
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+LMR+ G +PD+ TF ++I + S L L QG+QIHA VVK SLD V +SL+ MY +C
Sbjct: 1189 HLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKC 1248
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + D+ + F + + VV W++M+ HG +EA+NLF M+ + + VTF+ +L
Sbjct: 1249 GSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVL 1308
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL + ++FD M K Y P +EHY+C+VD LGR G + EA +I +MP KA+
Sbjct: 1309 SACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKAS 1368
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A +++ LL AC+T + A R+A+++L ++P D++ YVLLSNI+A++++W V++ R
Sbjct: 1369 ASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNM 1428
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRG-YVPDTGA 359
M+ +NVKK+PG SW+++KN+VH F + D+SHP++ I +E+L ++ G YVPDT
Sbjct: 1429 MKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLIYEKIEDLMKRIREEGSYVPDTDF 1488
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYI 400
+ D++ EEKE L +HSEKLAIAF GLI P K I
Sbjct: 1489 TLLDVEEEEKERALYYHSEKLAIAF-----GLISTPPSATIRVIKNLRVCGDCHSAIKCI 1543
Query: 401 SEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
S++ REI++RDA+RFHHFRNG CSCGDYW
Sbjct: 1544 SKLTQREIVLRDANRFHHFRNGTCSCGDYW 1573
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 130/258 (50%), Gaps = 6/258 (2%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D ++L +Y K G + E E ++ ++ +W ++ G ++ + L+ ++LM
Sbjct: 1032 DSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMH 1091
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+G D+IT + I + L L QG+QI A +K G + D+ V S ++ MY +CG +
Sbjct: 1092 EMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMP 1151
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
++++ F E D V W++MI+ Y +G + A++++ M + ++ TF +L+ A S
Sbjct: 1152 NALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASS 1211
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHY--TCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
E+G + +VK L+H+ T +VD+ +CG + +A + R M V+ +
Sbjct: 1212 CLTALEQGKQIHANVVK---LDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVR-KVV 1267
Query: 243 IWKTLLSACKTHKSTDMA 260
W +L H D A
Sbjct: 1268 FWNAMLLGLAQHGHVDEA 1285
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 135/287 (47%), Gaps = 16/287 (5%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+SL +MY K+G + EK P ++I+W T+I+ AQN L + + + + G +
Sbjct: 933 NSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLK 992
Query: 70 PDKITFVSVISSCS-----ELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
PD+ T SV+ +CS E TL G Q+H +K G D V ++LI +YS+ G +D
Sbjct: 993 PDQFTLASVLRACSTGDEGEYFTL--GSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMD 1050
Query: 125 DSVKTFLECEYS-DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
++ + L +Y D+ W++++ Y K +A+ F M + +++T + + A
Sbjct: 1051 EA-EFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKA- 1108
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
S C + K + K L + V+D+ +CG + A L + + + +
Sbjct: 1109 SGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEIS-RPDEVA 1167
Query: 244 WKTLLSACKTHKSTDMAGRIAE--EILGVNPQDAAPYVLLSNIHASA 288
W T++S + D A + + GV P + Y + I AS+
Sbjct: 1168 WTTMISGYIENGDEDHALSVYHLMRVSGVQPDE---YTFATLIKASS 1211
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 100/203 (49%), Gaps = 10/203 (4%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
N+ AW + G +D + + D +T V ++S+ L G+QIH
Sbjct: 858 NIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIH 917
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGE 155
A V+K+ + V V +SL++MYS+ G + + KTF+ D++ W++MI++Y +
Sbjct: 918 ALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEM 977
Query: 156 EAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDL--MVKKYRRKPRLEH-- 211
EAI F + + + + T S+L ACS ++G E+F L V Y K + +
Sbjct: 978 EAICTFRDLLRDGLKPDQFTLASVLRACS---TGDEG-EYFTLGSQVHVYAIKCGIINDS 1033
Query: 212 --YTCVVDLLGRCGYLDEAAALI 232
T ++DL + G +DEA L+
Sbjct: 1034 FVSTALIDLYSKGGKMDEAEFLL 1056
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 5/165 (3%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQ--NGLAEDVLDQY---NLMR 64
++L MY K GSL +V R+++ W +++A AQ + E+VL+ + L+R
Sbjct: 650 NNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQFADSSYENVLEGFRLFGLLR 709
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
GF ++T ++ C + + +H VK G LD+ V +L+++Y + G +
Sbjct: 710 EFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVG 769
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEF 169
+ F + D VLW+ M+ AY + +EA+ F + F
Sbjct: 770 QARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGF 814
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 104/250 (41%), Gaps = 27/250 (10%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFELDL +L ++Y K G + + + MP R+ + W ++ +N ++ L +
Sbjct: 747 GFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFF 806
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ GF PD VI + + + ++ HAE VKA A
Sbjct: 807 SAFHRSGFXPDFSNLHCVIGGVN--SDVSNNRKRHAEQVKAYA----------------- 847
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
+K F + S++ W+ + + G+ AI+ F+ + + + VT V +L
Sbjct: 848 ------MKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIIL 901
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
A + G + L++K P + ++++ + G + A N P + +
Sbjct: 902 SAAVGADDLDLGEQIHALVIKS-SFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSP-ELD 959
Query: 241 AIIWKTLLSA 250
I W T++S+
Sbjct: 960 LISWNTMISS 969
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 7/188 (3%)
Query: 81 SCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVL 140
S +A L G++ HA +V +G D + ++LI+MYS+CG L + + F + D+V
Sbjct: 620 SAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVT 679
Query: 141 WSSMIAAYGFHGKGE-----EAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
W+S++AAY E LF + + F +T LL C G +
Sbjct: 680 WNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETV 739
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK 255
V K + L +V++ + G + +A L MP + +A++W +L A +
Sbjct: 740 HGYAV-KIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPER-DAVLWNVMLKAYVENS 797
Query: 256 STDMAGRI 263
D A R
Sbjct: 798 FQDEALRF 805
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/450 (42%), Positives = 281/450 (62%), Gaps = 25/450 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF DL S + MY+K G + ++ + + +AW T+I+G +NG + L Y
Sbjct: 1129 GFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVY 1188
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+LMR+ G +PD+ TF ++I + S L L QG+QIHA VVK SLD V +SL+ MY +C
Sbjct: 1189 HLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKC 1248
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + D+ + F + + VV W++M+ HG +EA+NLF M+ + + VTF+ +L
Sbjct: 1249 GSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVL 1308
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL + ++FD M K Y P +EHY+C+VD LGR G + EA +I +MP KA+
Sbjct: 1309 SACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKAS 1368
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A +++ LL AC+T + A R+A+++L ++P D++ YVLLSNI+A++++W V++ R
Sbjct: 1369 ASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNM 1428
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRG-YVPDTGA 359
M+ +NVKK+PG SW+++KN+VH F + D+SHP++ I +E+L ++ G YVPDT
Sbjct: 1429 MKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLIYEKIEDLMKRIREEGSYVPDTDF 1488
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYI 400
+ D++ EEKE L +HSEKLAIAF GLI P K I
Sbjct: 1489 TLLDVEEEEKERALYYHSEKLAIAF-----GLISTPPSATIRVIKNLRVCGDCHSAIKCI 1543
Query: 401 SEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
S++ REI++RDA+RFHHFRNG CSCGDYW
Sbjct: 1544 SKLTQREIVLRDANRFHHFRNGTCSCGDYW 1573
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 130/258 (50%), Gaps = 6/258 (2%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D ++L +Y K G + E E ++ ++ +W ++ G ++ + L+ ++LM
Sbjct: 1032 DSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMH 1091
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+G D+IT + I + L L QG+QI A +K G + D+ V S ++ MY +CG +
Sbjct: 1092 EMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMP 1151
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
++++ F E D V W++MI+ Y +G + A++++ M + ++ TF +L+ A S
Sbjct: 1152 NALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASS 1211
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHY--TCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
E+G + +VK L+H+ T +VD+ +CG + +A + R M V+ +
Sbjct: 1212 CLTALEQGKQIHANVVK---LDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVR-KVV 1267
Query: 243 IWKTLLSACKTHKSTDMA 260
W +L H D A
Sbjct: 1268 FWNAMLLGLAQHGHVDEA 1285
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 135/287 (47%), Gaps = 16/287 (5%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+SL +MY K+G + EK P ++I+W T+I+ AQN L + + + + G +
Sbjct: 933 NSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLK 992
Query: 70 PDKITFVSVISSCS-----ELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
PD+ T SV+ +CS E TL G Q+H +K G D V ++LI +YS+ G +D
Sbjct: 993 PDQFTLASVLRACSTGDEGEYFTL--GSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMD 1050
Query: 125 DSVKTFLECEYS-DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
++ + L +Y D+ W++++ Y K +A+ F M + +++T + + A
Sbjct: 1051 EA-EFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKA- 1108
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
S C + K + K L + V+D+ +CG + A L + + + +
Sbjct: 1109 SGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEIS-RPDEVA 1167
Query: 244 WKTLLSACKTHKSTDMAGRIAE--EILGVNPQDAAPYVLLSNIHASA 288
W T++S + D A + + GV P + Y + I AS+
Sbjct: 1168 WTTMISGYIENGDEDHALSVYHLMRVSGVQPDE---YTFATLIKASS 1211
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 100/203 (49%), Gaps = 10/203 (4%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
N+ AW + G +D + + D +T V ++S+ L G+QIH
Sbjct: 858 NIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIH 917
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGE 155
A V+K+ + V V +SL++MYS+ G + + KTF+ D++ W++MI++Y +
Sbjct: 918 ALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEM 977
Query: 156 EAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDL--MVKKYRRKPRLEH-- 211
EAI F + + + + T S+L ACS ++G E+F L V Y K + +
Sbjct: 978 EAICTFRDLLRDGLKPDQFTLASVLRACS---TGDEG-EYFTLGSQVHVYAIKCGIINDS 1033
Query: 212 --YTCVVDLLGRCGYLDEAAALI 232
T ++DL + G +DEA L+
Sbjct: 1034 FVSTALIDLYSKGGKMDEAEFLL 1056
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 5/165 (3%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQ--NGLAEDVLDQY---NLMR 64
++L MY K GSL +V R+++ W +++A AQ + E+VL+ + L+R
Sbjct: 650 NNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQFADSSYENVLEGFRLFGLLR 709
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
GF ++T ++ C + + +H VK G LD+ V +L+++Y + G +
Sbjct: 710 EFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVG 769
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEF 169
+ F + D VLW+ M+ AY + +EA+ F + F
Sbjct: 770 QARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGF 814
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 104/250 (41%), Gaps = 27/250 (10%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFELDL +L ++Y K G + + + MP R+ + W ++ +N ++ L +
Sbjct: 747 GFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFF 806
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ GF PD VI + + + ++ HAE VKA A
Sbjct: 807 SAFHRSGFFPDFSNLHCVIGGVN--SDVSNNRKRHAEQVKAYA----------------- 847
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
+K F + S++ W+ + + G+ AI+ F+ + + + VT V +L
Sbjct: 848 ------MKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIIL 901
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
A + G + L++K P + ++++ + G + A N P + +
Sbjct: 902 SAAVGADDLDLGEQIHALVIKS-SFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSP-ELD 959
Query: 241 AIIWKTLLSA 250
I W T++S+
Sbjct: 960 LISWNTMISS 969
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 7/188 (3%)
Query: 81 SCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVL 140
S +A L G++ HA +V +G D + ++LI+MYS+CG L + + F + D+V
Sbjct: 620 SAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVT 679
Query: 141 WSSMIAAYGFHGKGE-----EAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
W+S++AAY E LF + + F +T LL C G +
Sbjct: 680 WNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETV 739
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK 255
V K + L +V++ + G + +A L MP + +A++W +L A +
Sbjct: 740 HGYAV-KIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPER-DAVLWNVMLKAYVENS 797
Query: 256 STDMAGRI 263
D A R
Sbjct: 798 FQDEALRF 805
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/444 (40%), Positives = 281/444 (63%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE + V G++L +MY K G++ K+ MP +NV+AW +I+G +Q+G + L +
Sbjct: 352 GFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALF 411
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G +PD VSV+ +C+ L QG+QIH +++G +V V + L+ +Y++C
Sbjct: 412 IEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKC 471
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ + K F DVV W++MI AYG HG GE+A+ LF +M++ + + + F ++L
Sbjct: 472 GNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAIL 531
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL ++G+++F M Y P+LEHY C+VDLLGR G+LDEA +I+NM ++ +
Sbjct: 532 TACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPD 591
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A +W LL AC+ H + ++ + A+ + ++P +A YVLLSNI+A A+RW+ V++ R+
Sbjct: 592 ANVWGALLGACRIHCNIELGEQAAKHLFELDPDNAGYYVLLSNIYAEAQRWEDVAKLRKM 651
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+E+ VKK+PG S + + V F +GD++HP+S +I LE L +M+ GYVP+T
Sbjct: 652 MKEKGVKKQPGCSVVAVHRDVQTFLVGDRTHPQSEQIYAMLEILYEQMRKAGYVPNTNLA 711
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNR 406
+ D++ E KE L HSEKLAI+F + G+ + + K+IS+I R
Sbjct: 712 LQDVEEEAKENILSSHSEKLAISFGIINTSPGIPIRIMKNLRVCSDCHNATKFISKIVGR 771
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EIIVRDA+RFHH +NG CSCGDYW
Sbjct: 772 EIIVRDANRFHHVKNGFCSCGDYW 795
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 142/254 (55%), Gaps = 2/254 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE D++ G++LA MY K GSL +V MP R+V++W +IAG +QNG + L +
Sbjct: 150 GFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALF 209
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M++ G +P+ T VSV+ C+ L L QG+QIH +++G DV V++ L++MY++C
Sbjct: 210 SEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKC 269
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ + K F DV W+++I Y + + EA+ F +M+ + + N +T VS+L
Sbjct: 270 GNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVL 329
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+H E+G + ++ + +V++ +CG ++ A L MP K N
Sbjct: 330 PACAHLFALEQGQQIHGYAIRSGFESNDVVG-NALVNMYAKCGNVNSAYKLFERMP-KKN 387
Query: 241 AIIWKTLLSACKTH 254
+ W ++S H
Sbjct: 388 VVAWNAIISGYSQH 401
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 141/254 (55%), Gaps = 2/254 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E D++ + L +MY K G++ K+ MPIR+V +W +I G + N + L +
Sbjct: 251 GIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFF 310
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
N M++ G +P+ IT VSV+ +C+ L L QGQQIH +++G + V ++L++MY++C
Sbjct: 311 NRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKC 370
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ + K F +VV W+++I+ Y HG EA+ LF +M+ + + + VS+L
Sbjct: 371 GNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVL 430
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+H E+G + ++ + + T +VD+ +CG ++ A L MP + +
Sbjct: 431 PACAHFLALEQGKQIHGYTIRS-GFESNVVVGTGLVDIYAKCGNVNTAQKLFERMP-EQD 488
Query: 241 AIIWKTLLSACKTH 254
+ W T++ A H
Sbjct: 489 VVSWTTMILAYGIH 502
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 125/242 (51%), Gaps = 8/242 (3%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
N + W I G +NG L Y M+ G PDK+ F+SVI +C + L G+++H
Sbjct: 84 NAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVH 143
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGE 155
+++ G DV V ++L SMY++CG L+++ + F DVV W+++IA Y +G+
Sbjct: 144 EDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPY 203
Query: 156 EAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV 215
EA+ LF +M+ + N T VS++ C+H E+G + ++ L +
Sbjct: 204 EALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLV-VNGL 262
Query: 216 VDLLGRCGYLDEAAALIRNMPVKA----NAIIWKTLLSACKTHKSTDMAGRIAEEILGVN 271
V++ +CG ++ A L MP++ NAII L++ + H++ R+ ++ G+
Sbjct: 263 VNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNS-QHHEALAFFNRM--QVRGIK 319
Query: 272 PQ 273
P
Sbjct: 320 PN 321
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/116 (21%), Positives = 55/116 (47%), Gaps = 4/116 (3%)
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC-SHCGLKEKGME 194
++ V+W I Y +G +A+ L+ QM++ + + F+S++ AC S L+
Sbjct: 83 NNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKV 142
Query: 195 FFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
D++ + + + T + + +CG L+ A + MP K + + W +++
Sbjct: 143 HEDIIARGFESDVIVG--TALASMYTKCGSLENARQVFDRMP-KRDVVSWNAIIAG 195
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/449 (40%), Positives = 273/449 (60%), Gaps = 24/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE + ++L MY K+G + V M ++VI+W +L+ G AQN E+ L +
Sbjct: 394 GFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIF 453
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
MR+ G PD+ S++S+C+EL L G+Q+H + +K+G V +SL++MY++C
Sbjct: 454 CDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKC 513
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
GCLDD+ F+ + DV+ W+++I Y +GKG ++ ++ M + +TF+ LL
Sbjct: 514 GCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLL 573
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
+ACSH GL ++G ++F M K Y KP EHY C++DL GR G LDEA L+ M VK +
Sbjct: 574 FACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPD 633
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A +WK+LLSAC+ H++ ++A R A + + P +A PYV+LSN+++++++W V++ R+
Sbjct: 634 ATVWKSLLSACRVHENLELAERAATNLFELEPMNAMPYVMLSNMYSASRKWNDVAKIRKL 693
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+ + + KEPG SWLEI ++V+ F D+ HPR EI ++E+ +K GYVPD
Sbjct: 694 MKSKGIVKEPGCSWLEINSRVNTFISDDRGHPREAEIYTKIDEIILRIKEAGYVPDMSFS 753
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
+HDMD E KE L +HSEKLA+AF GL+ P KYIS
Sbjct: 754 LHDMDKEGKEVGLAYHSEKLAVAF-----GLLAAPPSAPIRIFKNLRVCGDCHSAMKYIS 808
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+ R II+RD++ FHHFR G+CSCGDYW
Sbjct: 809 RVFTRHIILRDSNCFHHFREGECSCGDYW 837
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 149/293 (50%), Gaps = 11/293 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPI--RNVIAWITLIAGKAQNGLAEDVLD 58
GFE ++ + L MY K + E E + + + +N + W ++ G AQNG ++
Sbjct: 192 GFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVE 251
Query: 59 QYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
+ M G ++ TF +++++CS + G+Q+H +VK+G +V V S+L+ MY+
Sbjct: 252 FFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYA 311
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+CG L ++ E DVV W+S++ + HG EEA+ LF+ M + + +D TF S
Sbjct: 312 KCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPS 371
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+L C + K + L++K +L +VD+ + G +D A + M ++
Sbjct: 372 VLNCCVVGSINPKSVH--GLIIKTGFENYKLVS-NALVDMYAKTGDMDCAYTVFEKM-LE 427
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEE--ILGVNPQDAAPYVLLSNIHASAK 289
+ I W +L++ + S + + +I + + GVNP +++ S + A A+
Sbjct: 428 KDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQ---FIVASILSACAE 477
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 133/269 (49%), Gaps = 4/269 (1%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D + +++ Y+ G LVE ++ ++ I W ++I+G + G + D + MR
Sbjct: 95 DEYSWNTMISSYVNVGRLVEARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMR 154
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+ G++ + T SV+ CS L + G+ IH VVK G +V V++ L+ MY++C C+
Sbjct: 155 LEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVS 214
Query: 125 DSVKTF--LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
++ F LE + + VLW++M+ Y +G G +A+ F M + E N TF ++L A
Sbjct: 215 EAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTA 274
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
CS + G + +VK + + +VD+ +CG L A ++ M + +
Sbjct: 275 CSSVLARCFGEQVHGFIVKS-GFGSNVYVQSALVDMYAKCGDLKNAKNMLETME-DDDVV 332
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEILGVN 271
W +L+ H + A R+ + + G N
Sbjct: 333 SWNSLMVGFVRHGLEEEALRLFKNMHGRN 361
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 120/248 (48%), Gaps = 4/248 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF ++ S+L MY K G L + ++ M +V++W +L+ G ++GL E+ L +
Sbjct: 295 GFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLF 354
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M + D TF SV++ C + + +H ++K G V ++L+ MY++
Sbjct: 355 KNMHGRNMKIDDYTFPSVLNCC--VVGSINPKSVHGLIIKTGFENYKLVSNALVDMYAKT 412
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +D + F + DV+ W+S++ Y + EE++ +F M + S+L
Sbjct: 413 GDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASIL 472
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+ L E G + +K R + Y +V + +CG LD+A A+ +M VK +
Sbjct: 473 SACAELTLLEFGKQVHLDFIKSGLRWSQ-SVYNSLVAMYAKCGCLDDADAIFVSMQVK-D 530
Query: 241 AIIWKTLL 248
I W ++
Sbjct: 531 VITWTAII 538
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/448 (40%), Positives = 271/448 (60%), Gaps = 24/448 (5%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F DL S + MY+K G + KV +P + +AW T+I+G +NG E L Y+
Sbjct: 531 FHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYH 590
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
MR+ G +PD+ TF +++ +CS L L QG+QIHA ++K + D V++SL+ MY++CG
Sbjct: 591 QMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCG 650
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
++D+ F V LW++MI HG EEA+N F +M+ + + VTF+ +L
Sbjct: 651 NIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLS 710
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
ACSH GL + FD M K Y +P +EHY+C+VD L R G++ EA ++ +MP +A+A
Sbjct: 711 ACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASA 770
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
+++TLL+AC+ + R+AE++ ++P D+A YVLLSNI+A+A +W+ R M
Sbjct: 771 TMYRTLLNACRVQGDKETGERVAEKLFTMDPSDSAAYVLLSNIYAAANQWENAVSARNMM 830
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
+ NVKKEPG SW+++KN+VH F GD+SH + I +E + +K GYVPDT +
Sbjct: 831 KRVNVKKEPGFSWIDMKNKVHLFVAGDRSHEETDLIYNKVEYVMKRIKEEGYVPDTEFAL 890
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISE 402
D++ E+KE L +HSEKLAIA+ GL+ P KYIS
Sbjct: 891 VDIEEEDKESALSYHSEKLAIAY-----GLMKTPPSTTLRVIKNLRVCGDCHNAIKYISN 945
Query: 403 IKNREIIVRDASRFHHFRNGKCSCGDYW 430
+ REI++RDA+RFHHFR+G CSCGDYW
Sbjct: 946 VFQREIVLRDANRFHHFRSGICSCGDYW 973
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 135/275 (49%), Gaps = 6/275 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G LD ++L +Y K G + E E + ++ +W ++ G + + L +
Sbjct: 429 GIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLF 488
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+LM G + D+ITF + + L L QG+QIHA V+K D+ VIS ++ MY +C
Sbjct: 489 SLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKC 548
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + K F + D V W+++I+ +G+ E+A+ + QM + ++ TF +L+
Sbjct: 549 GEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLV 608
Query: 181 YACSHCGLKEKGMEFF-DLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
ACS E+G + ++M P + T +VD+ +CG +++A L R M ++
Sbjct: 609 KACSLLTALEQGKQIHANIMKLNCAFDPFV--MTSLVDMYAKCGNIEDAYGLFRRMNTRS 666
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNP 272
A +W ++ H + + A E+ GV P
Sbjct: 667 VA-LWNAMIVGLAQHGNAEEALNFFNEMKSRGVTP 700
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 132/252 (52%), Gaps = 3/252 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G++ + +S +MY+K+GS+ ++ M ++I+W T+I+G A++GL E L +
Sbjct: 327 GWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLF 386
Query: 61 NLMRMVGFRPDKITFVSVISSCSELA-TLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ G PD+ T SV+ +CS L + G+Q+H +KAG LD V ++LI +YS+
Sbjct: 387 IDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSK 446
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G ++++ F + D+ W++M+ + EA+ LF M ++ +A+ +TF +
Sbjct: 447 GGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANA 506
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
A C ++ + + +V K R L + ++D+ +CG + A + +P
Sbjct: 507 AKAAG-CLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIP-SP 564
Query: 240 NAIIWKTLLSAC 251
+ + W T++S C
Sbjct: 565 DDVAWTTVISGC 576
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 95/201 (47%), Gaps = 4/201 (1%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
+V W ++ Q G + +D + M D +T++ ++S + L L G+QIH
Sbjct: 261 DVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIH 320
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGE 155
VV+ G V V +S I+MY + G ++ + + F + + D++ W+++I+ G E
Sbjct: 321 GAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEE 380
Query: 156 EAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY--T 213
++ LF + + + T S+L ACS L+E + + L+ + T
Sbjct: 381 CSLRLFIDLLRSGLLPDQFTITSVLRACS--SLEESYCVGRQVHTCALKAGIVLDSFVST 438
Query: 214 CVVDLLGRCGYLDEAAALIRN 234
++D+ + G ++EA L N
Sbjct: 439 ALIDVYSKGGKMEEAELLFHN 459
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/255 (19%), Positives = 110/255 (43%), Gaps = 37/255 (14%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + D+ +L ++Y K + E + MP+R+V+ W ++ + G ++VL +
Sbjct: 152 GLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLF 211
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQI----HAEVVKAGASLDVGVISSLISM 116
+ G RPD ++ +++ +G G++ E V+A A+
Sbjct: 212 SAFHRSGLRPDCVSVRTIL--------MGVGKKTVFERELEQVRAYAT------------ 251
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
K F+ + SDV +W+ +++Y G+G EA++ F M + + +T+
Sbjct: 252 -----------KLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTY 300
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
+ +L + E G + +V ++ + +++ + G ++ A + M
Sbjct: 301 IVILSVVASLNHLELGKQIHGAVV-RFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMK 359
Query: 237 VKANAIIWKTLLSAC 251
+ + I W T++S C
Sbjct: 360 -EVDLISWNTVISGC 373
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 85/202 (42%), Gaps = 8/202 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPI--RNVIAWITLIAGKAQNGLAEDV-- 56
G D ++L MY K GSL K+ + P R+++ + ++A A G DV
Sbjct: 43 GLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEK 102
Query: 57 ----LDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISS 112
+ L+R + T + C + + + VK G DV V +
Sbjct: 103 THEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGA 162
Query: 113 LISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEAN 172
L+++Y++ + ++ F DVVLW+ M+ AY G G+E + LF + +
Sbjct: 163 LVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPD 222
Query: 173 DVTFVSLLYACSHCGLKEKGME 194
V+ ++L + E+ +E
Sbjct: 223 CVSVRTILMGVGKKTVFERELE 244
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 78/172 (45%), Gaps = 18/172 (10%)
Query: 91 GQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYS--DVVLWSSMIAAY 148
G++ HA +V +G + D V ++LI+MY++CG L + K F S D+V +++++AAY
Sbjct: 32 GKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAY 91
Query: 149 GFHG------KGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKK 202
G K EA ++F + Q T L C G ++
Sbjct: 92 AHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEA-----LQG 146
Query: 203 YRRKPRLEHYTCV----VDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
Y K L+ V V++ + + EA L MPV+ + ++W ++ A
Sbjct: 147 YAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVR-DVVLWNVMMKA 197
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/449 (41%), Positives = 274/449 (61%), Gaps = 24/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ ++ ++L MY K G L E K+ +P R+V+ W ++ G AQ G ++ +D +
Sbjct: 328 GYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLF 387
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G +PDK+TF S ++SCS A L +G+ IH ++V AG SLDV + S+L+SMY++C
Sbjct: 388 RRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKC 447
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +DD+ F + +VV W++MI HG+ EA+ FEQM+++ + + VTF S+L
Sbjct: 448 GSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVL 507
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+H GL E+G + F M Y KP +EHY+C VDLLGR G+L+EA +I MP +
Sbjct: 508 SACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPG 567
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+W LLSAC+ H + R AE +L ++P D YV LSNI+A+A R++ + R+
Sbjct: 568 PSVWGALLSACRIHSDVERGERAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKVRQV 627
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M +R+V KEPG SW+E+ +VH F + DKSHP + EI L +LT ++K +GYVPDT
Sbjct: 628 MEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPEAKEIYAELGKLTEQIKEQGYVPDTRFV 687
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
+HD+D E+K L HSE+LAI + GL+ P K+IS
Sbjct: 688 LHDVDEEQKVQTLCSHSERLAITY-----GLMKTPPGTPIRIVKNLRVCGDCHTASKFIS 742
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
++ REII RDA RFHHF +G CSCGD+W
Sbjct: 743 KVVGREIIARDAHRFHHFVDGVCSCGDFW 771
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 158/310 (50%), Gaps = 6/310 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G EL+ G+SL MY K G + + + + +P +NV+ W LIAG AQ G + L+
Sbjct: 227 GLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELL 286
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ P+KIT+ S++ C+ L G+++H ++++G ++ V+++LI+MY +C
Sbjct: 287 EKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKC 346
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L ++ K F + + DVV W++M+ Y G +EAI+LF +M+Q+ + + +TF S L
Sbjct: 347 GGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSAL 406
Query: 181 YACSHCGLKEKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
+CS ++G +V Y L+ + +V + +CG +D+ A L+ N +
Sbjct: 407 TSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQ--SALVSMYAKCGSMDD-ARLVFNQMSER 463
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLSNIHASAKRWQGVSEF 297
N + W +++ C H A E++ G+ P +LS +G F
Sbjct: 464 NVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHF 523
Query: 298 REAMRERNVK 307
R + +K
Sbjct: 524 RSMYLDYGIK 533
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 129/242 (53%), Gaps = 4/242 (1%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L MY K GSL + +V + RN+++W +I + Y M++ G +
Sbjct: 135 NTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCK 194
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
PDK+TFVS++++ + L GQ++H E+ KAG L+ V +SL+ MY++CG + +
Sbjct: 195 PDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVI 254
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F + +VV W+ +IA Y G+ + A+ L E+M+Q E N +T+ S+L C+
Sbjct: 255 FDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLAL 314
Query: 190 EKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
E G + +++ Y R+ + ++ + +CG L EA L ++P + + + W ++
Sbjct: 315 EHGKKVHRYIIQSGYGRE--IWVVNALITMYCKCGGLKEARKLFGDLPHR-DVVTWTAMV 371
Query: 249 SA 250
+
Sbjct: 372 TG 373
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 114/220 (51%), Gaps = 4/220 (1%)
Query: 49 QNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVG 108
+ G ++ L N M + G R F ++ C+ L +L QG+++HA ++K+G +
Sbjct: 73 KQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRY 132
Query: 109 VISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE 168
+ ++L+SMY++CG L D+ + F ++V W++MI A+ + EA +E M+
Sbjct: 133 LENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAG 192
Query: 169 FEANDVTFVSLLYACSHCGLKEKGMEF-FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDE 227
+ + VTFVSLL A ++ L + G + ++ +PR+ T +V + +CG + +
Sbjct: 193 CKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVG--TSLVGMYAKCGDISK 250
Query: 228 AAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEI 267
A + +P K N + W L++ D+A + E++
Sbjct: 251 AQVIFDKLPEK-NVVTWTLLIAGYAQQGQVDVALELLEKM 289
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/444 (42%), Positives = 278/444 (62%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +LD ++L MY K + + + MP R+++ W +I G A+ G A + L +
Sbjct: 262 GLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLF 321
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ MR G PDK+ V+V+ +C++L + + + I + + LDV + +++I M+++C
Sbjct: 322 DKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKC 381
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
GC++ + + F E +V+ WS+MIAAYG+HG+G +A++LF M + N +T VSLL
Sbjct: 382 GCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLL 441
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
YACSH GL E+G+ FF LM + Y + ++HYTCVVDLLGR G LDEA LI +M V+ +
Sbjct: 442 YACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKD 501
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+W L AC+THK +A + A +L + PQ+ Y+LLSNI+A+A RW+ V++ R+
Sbjct: 502 EGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDL 561
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M +R +KK PG +W+E+ N+ HQF++GD +HPRS EI L+ L ++++L GYVPDT
Sbjct: 562 MSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFV 621
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA-----EHTRGLIVM---------LPFKYISEIKNR 406
+HD+D E K L HSEKLAIAF EHT I+ K +S I R
Sbjct: 622 LHDVDEELKIGILYSHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGR 681
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
IIVRDA+RFHHF+ G CSCGDYW
Sbjct: 682 VIIVRDANRFHHFKEGACSCGDYW 705
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 158/295 (53%), Gaps = 15/295 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +LD ++L MY+K + + + M R+++ W +I G A+ G A + L +
Sbjct: 60 GLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLF 119
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
MR G PDK+ V+V+ +C++L + + + I + + LDV + +++I MY++C
Sbjct: 120 EKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKC 179
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
GC++ + + F E +V+ WS+MIAAYG+HG+G +A++LF M + +T SLL
Sbjct: 180 GCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLL 239
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC--VVDLLGRCGYLDEAAALIRNMPVK 238
YACS + G ++ Y+ L+H+ C +VD+ G+C +++A L MP +
Sbjct: 240 YACSDLKNLQMGRLIHHIV---YKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPER 296
Query: 239 ANAIIWKTLLSA---C-KTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAK 289
+ + W ++ C ++S + ++ EE GV P A +++ + A AK
Sbjct: 297 -DLVTWTVMIGGYAECGNANESLVLFDKMREE--GVVPDKVA---MVTVVFACAK 345
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 134/255 (52%), Gaps = 6/255 (2%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F+LD++ G+++ MY K G + ++ M +NVI+W +IA +G LD +
Sbjct: 162 FQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFR 221
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
+M G PDKIT S++ +CS+L L G+ IH V K G LD V ++L+ MY +C
Sbjct: 222 MMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCR 281
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
++D+ F + D+V W+ MI Y G E++ LF++M ++ + V V++++
Sbjct: 282 EIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVF 341
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY--TCVVDLLGRCGYLDEAAALIRNMPVKA 239
AC+ G K D + R+K +L+ T ++D+ +CG ++ A + M K
Sbjct: 342 ACAKLGAMHKARTIDDYI---QRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEK- 397
Query: 240 NAIIWKTLLSACKTH 254
N I W +++A H
Sbjct: 398 NVISWSAMIAAYGYH 412
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 107/212 (50%), Gaps = 2/212 (0%)
Query: 43 LIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAG 102
++ G A+ G + + + G RPD T VI +C +L L G+ IH V K G
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60
Query: 103 ASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFE 162
LD V ++L+ MY +C ++D+ F + + D+V W+ MI Y GK E++ LFE
Sbjct: 61 LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 120
Query: 163 QMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRC 222
+M ++ + V V++++AC+ G K D +++ + + + T ++D+ +C
Sbjct: 121 KMREEGVVPDKVAMVTVVFACAKLGAMHKA-RIIDDYIQRKKFQLDVILGTAMIDMYAKC 179
Query: 223 GYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
G ++ A + M K N I W +++A H
Sbjct: 180 GCVESAREIFDRMEEK-NVISWSAMIAAYGYH 210
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/449 (42%), Positives = 271/449 (60%), Gaps = 24/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D+ G++L +MY K+GS+ + +V MP R+V++W TL+ A + +
Sbjct: 361 GLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTF 420
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G + +KIT++ V+ +CS L G++IHAEVVKAG D+ V ++L+SMY +C
Sbjct: 421 KQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKC 480
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++D+++ F DVV W+++I G +G+G EA+ +E M+ + N TFV++L
Sbjct: 481 GSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVL 540
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC C L E+G F M K Y P +HY C+VD+L R G+L EA +I +P+K +
Sbjct: 541 SACRVCNLVEEGRRQFAFMSKDYGIVPTEKHYACMVDILARAGHLREAEDVILTIPLKPS 600
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A +W LL+AC+ H + ++ R AE L + PQ+A YV LS I+A+A W+ V++ R+
Sbjct: 601 AAMWGALLAACRIHCNVEIGERAAEHCLKLEPQNAGLYVSLSAIYAAAGMWRDVAKLRKF 660
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+ER VKKEPG SW+EI +VH F D+SHPR+ EI LE L +MK GYVPDT
Sbjct: 661 MKERGVKKEPGRSWIEIAGEVHSFVARDQSHPRTQEIYAELETLKKQMKSLGYVPDTRFV 720
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
MHD+D E KE + HHSEKLAIA+ GLI P K+IS
Sbjct: 721 MHDLDDEGKERAVCHHSEKLAIAY-----GLISTPPGTPIRISKNLRVCTDCHTATKFIS 775
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+I REII RDA RFHHF+NG+CSCGDYW
Sbjct: 776 KITKREIIARDAHRFHHFKNGECSCGDYW 804
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 160/315 (50%), Gaps = 22/315 (6%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + ++ ++L +Y GS+ E ++ ++V++W +I+G A GLA++ + +
Sbjct: 58 GVKPNVYITNTLLKLYAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLF 117
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
LM+ PDK TFVS++S+CS A L G++IH V++AG + D V ++LISMY++C
Sbjct: 118 TLMQQERLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKC 177
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + D+ + F D V W+++ AY G GEE++ + M Q+ + +T++++L
Sbjct: 178 GSVRDARRVFDAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVL 237
Query: 181 YACSHCGLKEKGMEFFDLMVK-KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
AC EKG + +V+ +Y R+ T + + +CG +A + + +
Sbjct: 238 SACGSLAALEKGKQIHAHIVESEYHSDVRVS--TALTKMYMKCGAFKDAREVFECLSYR- 294
Query: 240 NAIIWKTLL----SACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLS------------N 283
+ I W T++ + + ++ R+ EE GV P A +LS
Sbjct: 295 DVIAWNTMIRGFVDSGQLEEAHGTFHRMLEE--GVAPDRATYTTVLSACARPGGLARGKE 352
Query: 284 IHASAKRWQGVSEFR 298
IHA A + VS+ R
Sbjct: 353 IHARAAKDGLVSDVR 367
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 131/247 (53%), Gaps = 2/247 (0%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
+ D+ ++L MYMK G+ + +V + R+VIAW T+I G +G E+ ++
Sbjct: 261 YHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFH 320
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M G PD+ T+ +V+S+C+ L +G++IHA K G DV ++LI+MYS+ G
Sbjct: 321 RMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAG 380
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+ D+ + F DVV W++++ Y + E+ F+QM Q+ +AN +T++ +L
Sbjct: 381 SMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLK 440
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
ACS+ + G E +VK L ++ + +CG +++A + M ++ +
Sbjct: 441 ACSNPVALKWGKEIHAEVVKA-GLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMR-DV 498
Query: 242 IIWKTLL 248
+ W TL+
Sbjct: 499 VTWNTLI 505
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 96/188 (51%), Gaps = 10/188 (5%)
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
G + D +V ++ SC + L G+Q+H +++ G +V + ++L+ +Y+ CG ++++
Sbjct: 23 GPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEA 82
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHC 186
+ F + VV W+ MI+ Y G +EA NLF M+Q+ E + TFVS+L ACS
Sbjct: 83 RQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSP 142
Query: 187 GLKEKGMEFFDLMVKKYRRKPRLEHYTCV----VDLLGRCGYLDEAAALIRNMPVKANAI 242
+ G E ++ + L + T V + + +CG + +A + M + + +
Sbjct: 143 AVLNWGREIHVRVM-----EAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASR-DEV 196
Query: 243 IWKTLLSA 250
W TL A
Sbjct: 197 SWTTLTGA 204
>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/444 (41%), Positives = 273/444 (61%), Gaps = 18/444 (4%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM- 63
D+ + ++L Y KSG + + MP RN+++W T+I+G +Q+GLA+ L ++ M
Sbjct: 236 DVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMV 295
Query: 64 -RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
G RP+ +T +SV+ +C++L+TL +G+QIH + G + + V+ +L +MY++CG
Sbjct: 296 KEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGS 355
Query: 123 LDDSVKTF--LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
L D+ F L +++ W++MI AY +G G +A++ F +M Q + +D+TF LL
Sbjct: 356 LVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLL 415
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
CSH GL + G+++F+ M Y PR+EHY CV DLLGR G L EA+ L+ MP+ A
Sbjct: 416 SGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAG 475
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
IW +LL+AC+ H++ +MA A ++ + P++ YVLLSN++A A RWQ V + R
Sbjct: 476 PSIWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAI 535
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
++ + KK PG SW+EI + H F GD SHP+ EI ++LE L +MK GY PDT
Sbjct: 536 VKSQGTKKSPGCSWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDTSYV 595
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA-EHTRGLIVMLPFK-------------YISEIKNR 406
+HD+ EEKE+NL HSEKLA+AF +T V+ K +ISEI R
Sbjct: 596 LHDISEEEKEFNLIAHSEKLAVAFGILNTPAETVLRVTKNLRICGDCHTAMVFISEIYGR 655
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
E+IVRD +RFHHF+ G CSCGDYW
Sbjct: 656 EVIVRDINRFHHFKGGCCSCGDYW 679
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 137/321 (42%), Gaps = 43/321 (13%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + + GS + Y SG + V + + + + ++I A+ G AE + Y
Sbjct: 100 GLQPTALVGSKMVAFYASSGDIDSSVSVFNGIGEPSSLLFNSMIRAYARYGFAERTVATY 159
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M GF D TF V+ S EL ++ G+ +H +++ G D+ V +SLI +Y +C
Sbjct: 160 FSMHSWGFTGDYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKC 219
Query: 121 -------------------------------GCLDDSVKTFLECEYSDVVLWSSMIAAYG 149
GC+D ++ F + ++V W++MI+ Y
Sbjct: 220 GEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYS 279
Query: 150 FHGKGEEAINLFEQM--EQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKP 207
G ++A++LF++M E N VT +S+L AC+ E+G + +L +
Sbjct: 280 QSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNS- 338
Query: 208 RLEHYTCVVDLLGRCGYLDEAA----ALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRI 263
+ + +CG L +A L RN + N I W T+++A ++ A
Sbjct: 339 NASVLIALTAMYAKCGSLVDARNCFDKLNRN---EKNLIAWNTMITAYASYGHGLQAVST 395
Query: 264 AEEIL--GVNPQDAAPYVLLS 282
E++ G+ P D LLS
Sbjct: 396 FREMIQAGIQPDDITFTGLLS 416
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 101/245 (41%), Gaps = 26/245 (10%)
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P +++ V + L L G Q+HA ++ G V S +++ Y+ G +D SV
Sbjct: 68 PPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSV 127
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA------- 182
F +L++SMI AY +G E + + M F + TF +L +
Sbjct: 128 FNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSV 187
Query: 183 ----CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
C H + G++ FDL V T ++ L G+CG +++A + NM ++
Sbjct: 188 WMGKCVHGLILRIGLQ-FDLYVA-----------TSLIILYGKCGEINDAGKVFDNMTIR 235
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
+ W LL+ D A I E + N ++S S Q +S F
Sbjct: 236 -DVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWT--TMISGYSQSGLAQQALSLFD 292
Query: 299 EAMRE 303
E ++E
Sbjct: 293 EMVKE 297
>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
Length = 797
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/442 (41%), Positives = 275/442 (62%), Gaps = 14/442 (3%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E DLV+ + + Y+ + E + MP +N+++WI +I+G AQ G AE+ L +N
Sbjct: 356 ERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNR 415
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M++ GF P F I SCS L +L G+Q+HA+VV+ G + ++LI+MY+RCG
Sbjct: 416 MKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARCGV 475
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
+D + F+ D + W++MIAA G HG+G +AI LFE+M ++ + ++F++++ A
Sbjct: 476 VDAAHCLFINMPCVDAISWNAMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISA 535
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
CSH GL ++G ++FD M Y P EHY ++DLL R G EA ++ +MP + A
Sbjct: 536 CSHAGLVKEGRKYFDSMHNVYGVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAP 595
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMR 302
IW+ LL+ C+ H + D+ AE + + PQ YVLLSN++A A +W +++ R+ MR
Sbjct: 596 IWEALLAGCRIHGNIDLGIEAAERLFELKPQHDGTYVLLSNMYAVAGQWNDMAKVRKLMR 655
Query: 303 ERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMH 362
+R VKKEPG SW+E++N+VH F +GD +HP +I YLE+L EM+ GYVPDT +H
Sbjct: 656 DRGVKKEPGCSWIEVENKVHSFLVGDANHPEVRQIYNYLEQLVLEMRKIGYVPDTKCVLH 715
Query: 363 DMDSEEKEYNLKHHSEKLAIA--FAEHTRGLIVML------------PFKYISEIKNREI 408
D++S+ KE+ L HSEKLA+A F + G V + FK++S++ REI
Sbjct: 716 DVESDLKEHELSTHSEKLAVAYGFMKLPHGATVRVFKNLRICGDCHNAFKFMSKVVGREI 775
Query: 409 IVRDASRFHHFRNGKCSCGDYW 430
+VRD RFHHFR+GKCSCGDYW
Sbjct: 776 VVRDGKRFHHFRDGKCSCGDYW 797
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 136/305 (44%), Gaps = 39/305 (12%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D ++ +++ Y+K+ L ++ + + +AW +I+G A GL + + + M
Sbjct: 222 DELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMI 281
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVK--AGASLDVG--VISSLISMYSRC 120
M + D+ TF SVIS C+ G+++HA +K A + DV V ++LI+ Y +C
Sbjct: 282 MSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKC 341
Query: 121 G-------------------------------CLDDSVKTFLECEYSDVVLWSSMIAAYG 149
G C+D++ F E +++ W MI+
Sbjct: 342 GKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLA 401
Query: 150 FHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRL 209
G EEA+ F +M+ + FE D F + +CS G + G + +V +Y + L
Sbjct: 402 QIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVV-RYGYESSL 460
Query: 210 EHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL- 268
++ + RCG +D A L NMP +AI W +++A H A + EE+L
Sbjct: 461 SAGNALITMYARCGVVDAAHCLFINMPC-VDAISWNAMIAALGQHGQGTQAIELFEEMLK 519
Query: 269 -GVNP 272
G+ P
Sbjct: 520 EGILP 524
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 124/309 (40%), Gaps = 47/309 (15%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPI--RNVIAWITLIAGKAQNGLAEDVLDQYNL 62
D+VA ++L Y +G L K+ P+ R+ + + +I + N ++ +
Sbjct: 78 DIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCD 137
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQG-QQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M+ FRPD TF SV+ + + +A + QQ+H VVK+G V+++LIS Y +C
Sbjct: 138 MQRDNFRPDNYTFTSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCA 197
Query: 122 CLD---------------------------------------DSVKTFLECEYSDV-VLW 141
D+ K FL + V W
Sbjct: 198 ASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAW 257
Query: 142 SSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGME---FFDL 198
++MI+ Y G EA +F +M + + ++ TF S++ C++ G G E +F
Sbjct: 258 NAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLK 317
Query: 199 MVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTD 258
V + ++ +CG +D A + MP + + + W +LS + D
Sbjct: 318 TVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPER-DLVSWNIILSGYVNVRCMD 376
Query: 259 MAGRIAEEI 267
A E+
Sbjct: 377 EAKSFFNEM 385
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 86/187 (45%), Gaps = 3/187 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+E L AG++L MY + G + + MP + I+W +IA Q+G ++ +
Sbjct: 455 GYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAISWNAMIAALGQHGQGTQAIELF 514
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSR 119
M G PD+I+F++VIS+CS + +G++ + G + D + +I + R
Sbjct: 515 EEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDSMHNVYGVNPDEEHYARIIDLLCR 574
Query: 120 CGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQM-EQKEFEANDVTFV 177
G ++ + + +W +++A HG + I E++ E K +
Sbjct: 575 AGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHGNIDLGIEAAERLFELKPQHDGTYVLL 634
Query: 178 SLLYACS 184
S +YA +
Sbjct: 635 SNMYAVA 641
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 60 YNLMRMV-------GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISS 112
Y+L R V GF+P +I S+ + L + + E+ + D+ ++
Sbjct: 29 YSLARPVHAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDEIPQP----DIVARTT 84
Query: 113 LISMYSRCGCLDDSVKTFLECEYS--DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFE 170
LI+ YS G L S K F + D V +++MI AY + G AI LF M++ F
Sbjct: 85 LIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDNFR 144
Query: 171 ANDVTFVSLLYACSHCGLKEK 191
++ TF S+L A + KEK
Sbjct: 145 PDNYTFTSVLGALALVAEKEK 165
>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 642
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/444 (41%), Positives = 273/444 (61%), Gaps = 18/444 (4%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM- 63
D+ + ++L Y KSG + + MP RN+++W T+I+G +Q+GLA+ L ++ M
Sbjct: 199 DVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMV 258
Query: 64 -RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
G RP+ +T +SV+ +C++L+TL +G+QIH + G + + V+ +L +MY++CG
Sbjct: 259 KEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGS 318
Query: 123 LDDSVKTF--LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
L D+ F L +++ W++MI AY +G G +A++ F +M Q + +D+TF LL
Sbjct: 319 LVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLL 378
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
CSH GL + G+++F+ M Y PR+EHY CV DLLGR G L EA+ L+ MP+ A
Sbjct: 379 SGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAG 438
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
IW +LL+AC+ H++ +MA A ++ + P++ YVLLSN++A A RWQ V + R
Sbjct: 439 PSIWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAI 498
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
++ + KK PG SW+EI + H F GD SHP+ EI ++LE L +MK GY PDT
Sbjct: 499 VKSQGTKKSPGCSWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDTSYV 558
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA-EHTRGLIVMLPFK-------------YISEIKNR 406
+HD+ EEKE+NL HSEKLA+AF +T V+ K +ISEI R
Sbjct: 559 LHDISEEEKEFNLIAHSEKLAVAFGILNTPAETVLRVTKNLRICGDCHTAMVFISEIYGR 618
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
E+IVRD +RFHHF+ G CSCGDYW
Sbjct: 619 EVIVRDINRFHHFKGGCCSCGDYW 642
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 109/251 (43%), Gaps = 43/251 (17%)
Query: 71 DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC---------- 120
D TF V+ S EL ++ G+ +H +++ G D+ V +SLI +Y +C
Sbjct: 133 DYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVF 192
Query: 121 ---------------------GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAIN 159
GC+D ++ F + ++V W++MI+ Y G ++A++
Sbjct: 193 DNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALS 252
Query: 160 LFEQM--EQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVD 217
LF++M E N VT +S+L AC+ E+G + +L + +
Sbjct: 253 LFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNS-NASVLIALTA 311
Query: 218 LLGRCGYLDEAA----ALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVN 271
+ +CG L +A L RN + N I W T+++A ++ A E++ G+
Sbjct: 312 MYAKCGSLVDARNCFDKLNRN---EKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQ 368
Query: 272 PQDAAPYVLLS 282
P D LLS
Sbjct: 369 PDDITFTGLLS 379
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 87/234 (37%), Gaps = 41/234 (17%)
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P +++ V + L L G Q+HA ++ G V S +++ Y+ G +D SV
Sbjct: 68 PPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSV 127
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F+G G+ F E + C H +
Sbjct: 128 --------------------FNGIGDYFTFPFVLKSSVEL------LSVWMGKCVHGLIL 161
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
G++ FDL V T ++ L G+CG +++A + NM ++ + W LL+
Sbjct: 162 RIGLQ-FDLYVA-----------TSLIILYGKCGEINDAGKVFDNMTIR-DVSSWNALLA 208
Query: 250 ACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
D A I E + N + ++S S Q +S F E ++E
Sbjct: 209 GYTKSGCIDAALAIFERMPWRN--IVSWTTMISGYSQSGLAQQALSLFDEMVKE 260
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/449 (40%), Positives = 275/449 (61%), Gaps = 24/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF LDL S + MY+K G + +V +P + +AW T+I+G +NG E L Y
Sbjct: 1168 GFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTY 1227
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ MR+ +PD+ TF +++ +CS L L QG+QIHA +VK + D V++SL+ MY++C
Sbjct: 1228 HQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKC 1287
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++D+ F + W++MI HG +EA+ F+ M+ + + VTF+ +L
Sbjct: 1288 GNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVL 1347
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL + E F M K Y +P +EHY+C+VD L R G ++EA +I +MP +A+
Sbjct: 1348 SACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVDALSRAGRIEEAEKVISSMPFEAS 1407
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A +++TLL+AC+ + R+AE++L + P D+A YVLLSN++A+A +W+ V+ R
Sbjct: 1408 ASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAAANQWENVASARNM 1467
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
MR+ NVKK+PG SW+++KN+VH F GD+SH + I +E + ++ GYVPDT
Sbjct: 1468 MRKVNVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKVEYIMKRIREEGYVPDTDFA 1527
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
+ D++ E+KE +L +HSEKLAIA+ GL+ P KYIS
Sbjct: 1528 LVDVEEEDKECSLYYHSEKLAIAY-----GLMKTPPSTTLRVIKNLRVCGDCHSAIKYIS 1582
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
++ REI++RDA+RFHHFRNG CSCGDYW
Sbjct: 1583 KVFKREIVLRDANRFHHFRNGICSCGDYW 1611
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 127/255 (49%), Gaps = 4/255 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G LD ++L +Y K G + E E + ++ +W ++ G +G L Y
Sbjct: 1067 GVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLY 1126
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
LM+ G R D+IT V+ + L L QG+QIHA VVK G +LD+ V S ++ MY +C
Sbjct: 1127 ILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKC 1186
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ + + F E D V W++MI+ +G+ E A+ + QM + + ++ TF +L+
Sbjct: 1187 GEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLV 1246
Query: 181 YACSHCGLKEKGMEFFDLMVK-KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
ACS E+G + +VK P + T +VD+ +CG +++A L + +
Sbjct: 1247 KACSLLTALEQGRQIHANIVKLNCAFDPFV--MTSLVDMYAKCGNIEDARGLFKRTNTRR 1304
Query: 240 NAIIWKTLLSACKTH 254
A W ++ H
Sbjct: 1305 IA-SWNAMIVGLAQH 1318
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 131/255 (51%), Gaps = 9/255 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + + G+ L +MY+K+GS+ V M ++I+W T+I+G +GL E + +
Sbjct: 965 GLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMF 1024
Query: 61 NLMRMVGFRPDKITFVSVISSCSEL-ATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ PD+ T SV+ +CS L QIHA +KAG LD V ++LI +YS+
Sbjct: 1025 VHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSK 1084
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G ++++ F+ + D+ W++++ Y G +A+ L+ M++ ++ +T V+
Sbjct: 1085 RGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNA 1144
Query: 180 LYACSH-CGLKEKGMEFFDLMVKKYRRKPRLEHYTC--VVDLLGRCGYLDEAAALIRNMP 236
A GLK+ G + ++VK R L+ + V+D+ +CG ++ A + +P
Sbjct: 1145 AKAAGGLVGLKQ-GKQIHAVVVK---RGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIP 1200
Query: 237 VKANAIIWKTLLSAC 251
+ + W T++S C
Sbjct: 1201 -SPDDVAWTTMISGC 1214
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 82/182 (45%), Gaps = 3/182 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMP--IRNVIAWITLIAGKAQNG-LAEDVL 57
G D ++L MY K GSL K+ P R+++ W +++ A + + D
Sbjct: 686 GHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDTNRDLVTWNAILSALAAHADKSHDGF 745
Query: 58 DQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMY 117
+ L+R + T V C A+ + +H VK G DV V +L+++Y
Sbjct: 746 HLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIGLQWDVFVAGALVNIY 805
Query: 118 SRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
++ G + ++ F DVVLW+ M+ AY EA+ LF + + F +DVT
Sbjct: 806 AKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFRPDDVTLR 865
Query: 178 SL 179
+L
Sbjct: 866 TL 867
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 74/149 (49%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
+VI W ++ Q G A + +D + M D +TFV +++ + L L G+QIH
Sbjct: 899 DVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIH 958
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGE 155
V+++G V V + LI+MY + G + + F + D++ W++MI+ G E
Sbjct: 959 GIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEE 1018
Query: 156 EAINLFEQMEQKEFEANDVTFVSLLYACS 184
++ +F + + + T S+L ACS
Sbjct: 1019 CSVGMFVHLLRDSLLPDQFTVASVLRACS 1047
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/253 (19%), Positives = 106/253 (41%), Gaps = 33/253 (13%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + D+ +L ++Y K G + E + M +R+V+ W ++ L + + +
Sbjct: 790 GLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLF 849
Query: 61 NLMRMVGFRPDKITF--VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
+ GFRPD +T +S + C + + + +Q A K + MY
Sbjct: 850 SEFHRTGFRPDDVTLRTLSRVVKCKK--NILELKQFKAYATK-------------LFMYD 894
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
G SDV++W+ ++ + G+ EA++ F M + +TFV
Sbjct: 895 DDG--------------SDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVV 940
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+L + E G + ++++ + + C++++ + G + A ++ M +
Sbjct: 941 MLTVVAGLNCLELGKQIHGIVMRSGLDQV-VSVGNCLINMYVKAGSVSRARSVFGQMN-E 998
Query: 239 ANAIIWKTLLSAC 251
+ I W T++S C
Sbjct: 999 VDLISWNTMISGC 1011
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 77/177 (43%), Gaps = 5/177 (2%)
Query: 77 SVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYS 136
S++ + L G++ HA ++ +G D V ++LI+MY++CG L + K F +
Sbjct: 661 SILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDT 720
Query: 137 --DVVLWSSMIAAYGFHG-KGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGM 193
D+V W+++++A H K + +LF + + T + C
Sbjct: 721 NRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASE 780
Query: 194 EFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
V K + + +V++ + G + EA L M V+ + ++W ++ A
Sbjct: 781 SLHGYAV-KIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVR-DVVLWNVMMKA 835
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/449 (42%), Positives = 271/449 (60%), Gaps = 24/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D+ G++L +MY K+GS+ + +V MP R+V++W L+ G A G + +
Sbjct: 377 GLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTF 436
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G +KIT++ V+ +CS L G++IHAEVVKAG D+ V ++L+SMY +C
Sbjct: 437 KKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKC 496
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++D+++ DVV W+++I +G+G EA+ FE M+ +E N TFV+++
Sbjct: 497 GSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVM 556
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC L E+G F M K Y P +HY C+VD+L R G+L EA +I MP K +
Sbjct: 557 SACRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGHLGEAEDVILTMPFKPS 616
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A +W LL+AC+ H + ++ + AE+ L + PQ+A YV LS I+A+A W+ V++ R+
Sbjct: 617 AAMWGALLAACRAHGNVEIGEQAAEQCLKLEPQNAGTYVSLSFIYAAAGMWRDVAKLRKL 676
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+ER VKKEPG SW+E+ +VH F GD+SHPR+ EI LE LT ++K GYVPDT
Sbjct: 677 MKERGVKKEPGRSWIEVAGEVHSFVAGDQSHPRTEEIYSELEALTKQIKSLGYVPDTRFV 736
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
MHD+D E KE + HHSEKLAIA+ GLI P K+IS
Sbjct: 737 MHDLDQEGKERAVCHHSEKLAIAY-----GLISTPPETPIRVSKNLRVCTDCHTATKFIS 791
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+I REII RDA RFHHF+NG+CSCGDYW
Sbjct: 792 KITGREIIARDAHRFHHFKNGECSCGDYW 820
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 138/249 (55%), Gaps = 4/249 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + ++ ++L +Y+ GS+ E ++ ++V++W +I+G A GL ++ + +
Sbjct: 74 GMKPNVYIINTLLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLF 133
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
LM+ G PDK TFVS++S+CS A L G+++H V++AG + + V ++LISMY++C
Sbjct: 134 TLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKC 193
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + D+ + F D V W+++ AY G +E++ + M Q+ + +T++++L
Sbjct: 194 GSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVL 253
Query: 181 YACSHCGLKEKGMEFFDLMVK-KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
AC EKG + +V+ ++ R+ T + + +CG + +A + +P +
Sbjct: 254 SACGSLAALEKGKQIHAQIVESEHHSDVRVS--TALTKMYIKCGAVKDAREVFECLPNR- 310
Query: 240 NAIIWKTLL 248
+ I W T++
Sbjct: 311 DVIAWNTMI 319
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 133/248 (53%), Gaps = 2/248 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + G++L MY K GS+ + +V M R+ ++W TL A++G A++ L Y
Sbjct: 175 GLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTY 234
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M G RP +IT+++V+S+C LA L +G+QIHA++V++ DV V ++L MY +C
Sbjct: 235 HAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKC 294
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + D+ + F DV+ W++MI G+ EEA +F +M ++ + VT++++L
Sbjct: 295 GAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAIL 354
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+ G G E VK + ++++ + G + +A + MP K +
Sbjct: 355 SACARPGGLACGKEIHARAVKDGLVSD-VRFGNALINMYSKAGSMKDARQVFDRMP-KRD 412
Query: 241 AIIWKTLL 248
+ W L+
Sbjct: 413 VVSWTALV 420
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 134/244 (54%), Gaps = 2/244 (0%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ ++L MY+K G++ + +V +P R+VIAW T+I G +G E+ ++ M
Sbjct: 280 DVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRML 339
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
PD++T+++++S+C+ L G++IHA VK G DV ++LI+MYS+ G +
Sbjct: 340 KECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMK 399
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D+ + F DVV W++++ Y G+ E+ + F++M Q+ EAN +T++ +L ACS
Sbjct: 400 DARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACS 459
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
+ + G E +VK L ++ + +CG +++A + M + + + W
Sbjct: 460 NPVALKWGKEIHAEVVKAGIFAD-LAVANALMSMYFKCGSVEDAIRVSEGMSTR-DVVTW 517
Query: 245 KTLL 248
TL+
Sbjct: 518 NTLI 521
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 99/196 (50%), Gaps = 5/196 (2%)
Query: 55 DVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLI 114
DVL QY + G + D +V ++ SC + L G+Q+H +++ G +V +I++L+
Sbjct: 30 DVL-QY--LHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLL 86
Query: 115 SMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDV 174
+Y CG ++++ + F + VV W+ MI+ Y G G+EA NLF M+Q+ E +
Sbjct: 87 KLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKF 146
Query: 175 TFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRN 234
TFVS+L ACS G E + V + ++ + +CG + +A +
Sbjct: 147 TFVSILSACSSPAALNWGREVH-VRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDA 205
Query: 235 MPVKANAIIWKTLLSA 250
M + + + W TL A
Sbjct: 206 MASR-DEVSWTTLTGA 220
>gi|147812499|emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]
Length = 440
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 178/443 (40%), Positives = 269/443 (60%), Gaps = 24/443 (5%)
Query: 7 VAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV 66
+ ++L MY K G V M ++VI+W +L+ G NG E+ L + MR++
Sbjct: 3 LVNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIM 62
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
G PD+I +V+S+C+EL L G+Q+HA +K+G + V +SL+SMY++CGC++D+
Sbjct: 63 GIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDA 122
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHC 186
K F E DV+ W+++I Y +G+G E++N + M + + +TF+ LL+ACSH
Sbjct: 123 NKVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACSHA 182
Query: 187 GLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKT 246
GL E G +F M + Y KP EHY C++DLLGR G L EA L+ M V+ +A +WK
Sbjct: 183 GLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKA 242
Query: 247 LLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNV 306
LL+AC+ H + ++ R A + + P++A PYVLLSN++++A +W+ ++ R M+ R V
Sbjct: 243 LLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGV 302
Query: 307 KKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDS 366
KEPG SW+E+ ++VH+F D+SHPR+ EI ++E+ +K GYVPD +HDMD
Sbjct: 303 SKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFALHDMDE 362
Query: 367 EEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNRE 407
E KE L +HSEKLA+AF GL+ M P KY+S + +R
Sbjct: 363 EGKELGLAYHSEKLAVAF-----GLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFHRH 417
Query: 408 IIVRDASRFHHFRNGKCSCGDYW 430
+I+RD++ FHHFR G CSC DYW
Sbjct: 418 VILRDSNCFHHFREGACSCSDYW 440
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 89/188 (47%), Gaps = 17/188 (9%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G L +SL MY K G + + KV M I++VI W LI G AQNG + L+ Y
Sbjct: 98 GLGSSLSVDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRESLNFY 157
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQ---QIHAEV--VKAGASLDVGVISSLIS 115
N M G +PD ITF+ ++ +CS + G+ Q EV +K G + +I
Sbjct: 158 NBMIASGVKPDFITFIGLLFACSHAGLVEHGRSYFQSMEEVYGIKPGPEH----YACMID 213
Query: 116 MYSRCGCLDDSVKTFLECEYS-DVVLWSSMIAAYGFHGK---GEEAINLFEQMEQKEFEA 171
+ R G L ++ + + D +W +++AA HG GE A N ++E K
Sbjct: 214 LLGRSGKLMEAKELLNQMAVQPDATVWKALLAACRVHGNVELGERAANNLFELEPK---- 269
Query: 172 NDVTFVSL 179
N V +V L
Sbjct: 270 NAVPYVLL 277
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/448 (40%), Positives = 275/448 (61%), Gaps = 24/448 (5%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
++ ++ GS+L MY K S+ E V R M +NV++W ++ G QNG +E+ + +
Sbjct: 305 YQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFC 364
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M+ G PD T SVISSC+ LA+L +G Q H + +G + V ++L+++Y +CG
Sbjct: 365 DMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCG 424
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
++DS + F E Y D V W+++++ Y GK E + LFE M F+ + VTF+ +L
Sbjct: 425 SIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLS 484
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
ACS GL +KG + F+ M+K++R P +HYTC++DL R G L+EA I MP +A
Sbjct: 485 ACSRAGLVQKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDA 544
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
I W +LLS+C+ H++ ++ AE +L + P + A Y+LLS+I+A+ +W+ V+ R+ M
Sbjct: 545 IGWASLLSSCRFHRNMEIGKWAAESLLKLEPHNTASYILLSSIYAAKGKWEEVANLRKGM 604
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
R++ ++KEPG SW++ KNQVH F+ D+S+P S +I LE+L +M GYVPD + +
Sbjct: 605 RDKGLRKEPGCSWIKYKNQVHIFSADDQSNPFSDQIYSELEKLNYKMVQEGYVPDMNSVL 664
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISE 402
HD+D EK L HHSEKLAIAF GLI + P KYIS+
Sbjct: 665 HDVDDSEKIKMLNHHSEKLAIAF-----GLIFIPPGLPIRVVKNLRVCGDCHNATKYISK 719
Query: 403 IKNREIIVRDASRFHHFRNGKCSCGDYW 430
I REI+VRDA+RFH F++G+CSCGD+W
Sbjct: 720 ITQREILVRDAARFHLFKDGRCSCGDFW 747
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 152/340 (44%), Gaps = 37/340 (10%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNV----------------------- 37
GF+ + GS L MY K+G + + MP +NV
Sbjct: 172 GFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLF 231
Query: 38 --------IAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLG 89
I+W +IAG QNGL + +D + MR+ D+ TF SV+++C + L
Sbjct: 232 YDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQ 291
Query: 90 QGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYG 149
+G+Q+HA +++ ++ V S+L+ MY +C + + F + +VV W++M+ YG
Sbjct: 292 EGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYG 351
Query: 150 FHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFF-DLMVKKYRRKPR 208
+G EEA+ +F M+ E +D T S++ +C++ E+G +F +V
Sbjct: 352 QNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFIT 411
Query: 209 LEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL 268
+ + +V L G+CG ++++ L M + + W L+S + R+ E +L
Sbjct: 412 VSN--ALVTLYGKCGSIEDSHRLFSEMSY-VDEVSWTALVSGYAQFGKANETLRLFESML 468
Query: 269 --GVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNV 306
G P +LS + +G F ++E +
Sbjct: 469 AHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRI 508
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 137/304 (45%), Gaps = 36/304 (11%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
+L + ++L Y K L E E+V MP R++++W +LI+ A G + YNLM
Sbjct: 74 NLYSWNTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLML 133
Query: 65 MVG-FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS----- 118
G F ++I +++ S+ + G Q+H VVK G V V S L+ MYS
Sbjct: 134 YNGPFNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLV 193
Query: 119 --------------------------RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHG 152
RC ++DS + F + + D + W++MIA + +G
Sbjct: 194 FCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNG 253
Query: 153 KGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY 212
EAI+LF +M + E + TF S+L AC ++G + +++ + +
Sbjct: 254 LDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRT-DYQDNIFVG 312
Query: 213 TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GV 270
+ +VD+ +C + A + R M K N + W +L + ++ A +I ++ G+
Sbjct: 313 SALVDMYCKCKSIKSAETVFRKMNCK-NVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGI 371
Query: 271 NPQD 274
P D
Sbjct: 372 EPDD 375
>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 179/446 (40%), Positives = 272/446 (60%), Gaps = 26/446 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+++ +++ Y+ + + E + MP RNV+ W +I+G AQNG E+ L +N M+
Sbjct: 356 DIISWNAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMK 415
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G P F I++CS L +L GQQIH++V++ G + ++LI+MYSRCG ++
Sbjct: 416 SEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVE 475
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ FL Y D V W++MIAA HG G +AI LFEQM +++ + +TF+++L AC+
Sbjct: 476 SAESVFLTMPYVDSVSWNAMIAALAQHGHGVKAIELFEQMMKEDILPDRITFLTILTACN 535
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL ++G +FD M +Y P +HY ++DLL R G +A ++I++MP +A A IW
Sbjct: 536 HAGLIKEGRHYFDTMCTRYGITPGEDHYARLIDLLCRAGMFLKAQSVIKSMPFEAGAPIW 595
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
+ LL+ C+ H + ++ + A+ +L + P Y++LSN++A+ +W V+ R MRER
Sbjct: 596 EALLAGCRIHGNMELGIQAADRLLELIPGQDGTYIILSNMYAALGQWDEVARVRLLMRER 655
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
VKKEPG SW+E++N VH F + D HP + YL++L +EMK GYVPDT +HDM
Sbjct: 656 GVKKEPGCSWVEVENMVHVFLVDDARHPEVQAVYTYLQQLVNEMKKLGYVPDTKFVLHDM 715
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP--------------------FKYISEIK 404
+SE KE++L HSEKLA+ + I+ LP FKYIS++
Sbjct: 716 ESEHKEHSLSTHSEKLAVVYG------IMKLPLGATIRVFKNLRICGDCHNAFKYISKVV 769
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
REI+VRD RFHHF+NG+CSCG+YW
Sbjct: 770 EREIVVRDRKRFHHFKNGECSCGNYW 795
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 127/292 (43%), Gaps = 41/292 (14%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y+++ LV +++ + +AW +I+G + GL E+ D + M +G + D+ T+
Sbjct: 227 YVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTY 286
Query: 76 VSVISSCS----ELATLGQGQQIHA----EVVKAGASLDVGVISSLISMYSR-------- 119
S+IS+C ++ G+Q+H VV+ + V ++LI+ Y++
Sbjct: 287 TSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEAR 346
Query: 120 -----------------------CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEE 156
++++ F E +V+ W+ MI+ +G GEE
Sbjct: 347 RVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEE 406
Query: 157 AINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVV 216
+ LF QM+ + E D F + ACS G + G + ++ + L ++
Sbjct: 407 GLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQVI-RLGHDSGLSAGNALI 465
Query: 217 DLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL 268
+ RCG ++ A ++ MP +++ W +++A H A + E+++
Sbjct: 466 TMYSRCGVVESAESVFLTMPY-VDSVSWNAMIAALAQHGHGVKAIELFEQMM 516
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 130/316 (41%), Gaps = 55/316 (17%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMP--IRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
D+VA ++L Y SG++ +++ P IR+ +++ +I + L+ +
Sbjct: 70 DIVARTTLLSAYSSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQ 129
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQG-QQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M+ GF PD TF SV+S+ S +A + Q +H EV+K G L V ++L+S Y C
Sbjct: 130 MKRYGFLPDPFTFSSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCA 189
Query: 122 C---------LDDSVKTFLECEYSDV---------------------------------V 139
+ + K F E + + V
Sbjct: 190 SSPLVKSSQLMASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDV 249
Query: 140 LWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLM 199
W++MI+ Y G EEA + F +M + ++ T+ SL+ AC C ++ GM
Sbjct: 250 AWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCN-EKMGMFNCGRQ 308
Query: 200 VKKYRRKPRLE---HYTCVVD-----LLGRCGYLDEAAALIRNMPVKANAIIWKTLLSAC 251
V Y + +E H+ V+ + + EA + MPV+ + I W +LS
Sbjct: 309 VHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVR-DIISWNAVLSGY 367
Query: 252 KTHKSTDMAGRIAEEI 267
+ + A I E+
Sbjct: 368 VNAQRIEEANSIFSEM 383
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 75/166 (45%), Gaps = 2/166 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + L AG++L MY + G + E V MP + ++W +IA AQ+G ++ +
Sbjct: 453 GHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGVKAIELF 512
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQ-IHAEVVKAGASLDVGVISSLISMYSR 119
M PD+ITF++++++C+ + +G+ + G + + LI + R
Sbjct: 513 EQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHYARLIDLLCR 572
Query: 120 CGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQM 164
G + + + +W +++A HG E I +++
Sbjct: 573 AGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNMELGIQAADRL 618
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 60/120 (50%), Gaps = 6/120 (5%)
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
GF+P+ +I+ + + + +++ ++ K D+ ++L+S YS G + +
Sbjct: 35 GFKPNTFILNRLINIYCKSSNITYARKLFDKIPKP----DIVARTTLLSAYSSSGNVKLA 90
Query: 127 VKTFLECEYS--DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ F + D V +++MI AY G A+NLF QM++ F + TF S+L A S
Sbjct: 91 QQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTFSSVLSALS 150
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/449 (40%), Positives = 275/449 (61%), Gaps = 24/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF LDL S + MY+K G + ++ +P + +AW T+I+G +NG E L Y
Sbjct: 1139 GFNLDLFVISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTY 1198
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ MR+ +PD+ TF +++ +CS L L QG+QIHA VK + D V++SL+ MY++C
Sbjct: 1199 HHMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKC 1258
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++D+ F S + W++MI HG EEA+ FE+M+ + + VTF+ +L
Sbjct: 1259 GNIEDARGLFKRTNTSRIASWNAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVL 1318
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL + E F M K Y +P +EHY+C+VD L R G + EA +I +MP +A+
Sbjct: 1319 SACSHSGLVSEAYENFYSMQKIYGIEPEIEHYSCLVDALSRAGRIREAEKVISSMPFEAS 1378
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A +++TLL+AC+ + R+AE++L + P D+A YVLLSN++A+A +W+ V+ R
Sbjct: 1379 ASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAAANQWENVASARNM 1438
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
MR+ NVKK+PG SW+++KN+VH F GD+SH + I +E + ++ GY+PDT
Sbjct: 1439 MRKANVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKVEYIMKRIREEGYLPDTDFA 1498
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
+ D++ E+KE +L +HSEKLAIA+ GL+ P KYIS
Sbjct: 1499 LVDVEEEDKECSLYYHSEKLAIAY-----GLMKTPPSTTLRVIKNLRVCGDCHNAIKYIS 1553
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
++ RE+++RDA+RFHHFR+G CSCGDYW
Sbjct: 1554 KVFEREVVLRDANRFHHFRSGVCSCGDYW 1582
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 134/275 (48%), Gaps = 6/275 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G LD ++L +Y KSG + E E + ++ +W ++ G +G L Y
Sbjct: 1038 GVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLY 1097
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
LM+ G R ++IT + + L L QG+QI A VVK G +LD+ VIS ++ MY +C
Sbjct: 1098 ILMQESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKC 1157
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ + + F E D V W++MI+ +G+ E A+ + M + + ++ TF +L+
Sbjct: 1158 GEMESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLV 1217
Query: 181 YACSHCGLKEKGMEFFDLMVK-KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
ACS E+G + VK P + T +VD+ +CG +++A L +
Sbjct: 1218 KACSLLTALEQGRQIHANTVKLNCAFDPFV--MTSLVDMYAKCGNIEDARGLFKRTNTSR 1275
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNP 272
A W ++ H + + A + EE+ GV P
Sbjct: 1276 IA-SWNAMIVGLAQHGNAEEALQFFEEMKSRGVTP 1309
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 136/258 (52%), Gaps = 15/258 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + + G+ L +MY+K+GS+ V M ++++W T+I+G A +GL E + +
Sbjct: 936 GLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMF 995
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQG----QQIHAEVVKAGASLDVGVISSLISM 116
+ G PD+ T SV+ +CS +LG G QIHA +KAG LD V ++LI +
Sbjct: 996 VDLLRGGLLPDQFTVASVLRACS---SLGGGCHLATQIHACAMKAGVVLDSFVSTTLIDV 1052
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
YS+ G ++++ F+ + D+ W++M+ Y G +A+ L+ M++ AN +T
Sbjct: 1053 YSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQITL 1112
Query: 177 VSLLYACSH-CGLKEKGMEFFDLMVKKYRRKPRLEHY--TCVVDLLGRCGYLDEAAALIR 233
+ A GLK+ G + ++VK R L+ + + V+D+ +CG ++ A +
Sbjct: 1113 ANAAKAAGGLVGLKQ-GKQIQAVVVK---RGFNLDLFVISGVLDMYLKCGEMESARRIFN 1168
Query: 234 NMPVKANAIIWKTLLSAC 251
+P + + W T++S C
Sbjct: 1169 EIP-SPDDVAWTTMISGC 1185
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 81/181 (44%), Gaps = 4/181 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMP--IRNVIAWITLIAGKAQNGLAEDVLD 58
G D ++L MY K GSL K+ P R+++ W +++ A A D
Sbjct: 656 GHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAILSAHADK--ARDGFH 713
Query: 59 QYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
+ L+R + T V C A+ + +H VK G DV V +L+++Y+
Sbjct: 714 LFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDVFVAGALVNIYA 773
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+ G + ++ F DVVLW+ M+ AY G EA+ LF + + +DVT +
Sbjct: 774 KFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVTLCT 833
Query: 179 L 179
L
Sbjct: 834 L 834
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 75/152 (49%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
+VIAW ++ Q G + +D + M D +TFV ++S + L L G+QIH
Sbjct: 870 DVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIH 929
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGE 155
VV++G V V + LI+MY + G + + F + D+V W++MI+ G E
Sbjct: 930 GIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEE 989
Query: 156 EAINLFEQMEQKEFEANDVTFVSLLYACSHCG 187
++ +F + + + T S+L ACS G
Sbjct: 990 CSVGMFVDLLRGGLLPDQFTVASVLRACSSLG 1021
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/254 (19%), Positives = 105/254 (41%), Gaps = 31/254 (12%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + D+ +L ++Y K G + E + M +R+V+ W ++ GL + L +
Sbjct: 757 GLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLF 816
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ G RPD +T ++ A VVK+ ++ + L +
Sbjct: 817 SEFNRTGLRPDDVTLCTL-----------------ARVVKSKQNVLEWQLKQLKAY---- 855
Query: 121 GCLDDSVKTFLECEY---SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
K F+ + SDV+ W+ ++ + G+ EA++ F M + +TFV
Sbjct: 856 -----GTKLFMYDDDDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFV 910
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
+L + E G + ++V+ + + C++++ + G + A + M
Sbjct: 911 VMLSVVAGLNCLELGKQIHGIVVRSGLDQV-VSVGNCLINMYVKTGSVSRARTVFWQMN- 968
Query: 238 KANAIIWKTLLSAC 251
+ + + W T++S C
Sbjct: 969 EVDLVSWNTMISGC 982
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 79/178 (44%), Gaps = 6/178 (3%)
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
+ S++ + L G++ HA ++ +G D + ++LI+MYS+CG L + K F
Sbjct: 629 WFSILRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTP 688
Query: 135 YS--DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKG 192
+ D+V W+++++A+ K + +LF + + A T + C
Sbjct: 689 DTSRDLVTWNAILSAHA--DKARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAA 746
Query: 193 MEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
V K + + +V++ + G + EA L M ++ + ++W ++ A
Sbjct: 747 ESLHGYAV-KIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLR-DVVLWNVMMKA 802
>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/440 (41%), Positives = 270/440 (61%), Gaps = 14/440 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D++ ++L Y+ +G + E + MP +N++ W +I+G AQNG E L +N M+
Sbjct: 358 DIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMK 417
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+ G+ P+ F I++CS L L G+Q+HA++V G + V +++I+MY+RCG ++
Sbjct: 418 LDGYEPNDYAFAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVE 477
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ FL + D V W+SMIAA G HG G +AI L+EQM ++ + TF+++L ACS
Sbjct: 478 AARTMFLTMPFVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACS 537
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL E+G +F+ M++ Y P +HY ++DL R G +A +I +MP +A A IW
Sbjct: 538 HAGLVEEGNRYFNSMLENYGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPIW 597
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
+ LL+ C+TH + D+ AE++ + PQ YVLLSN++AS RW V+ R+ MR+R
Sbjct: 598 EALLAGCRTHGNMDLGIEAAEKLFKLIPQHDGTYVLLSNMYASLGRWNDVARTRKLMRDR 657
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
VKKEP SW E++N+VH F + D HP + I YLE+L EMK GY+PDT +HDM
Sbjct: 658 GVKKEPACSWTEVENKVHVFLVDDTVHPEVLSIYNYLEKLNLEMKKIGYIPDTKYVLHDM 717
Query: 365 DSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNREIIV 410
+SE KEY L HSEKLA+AF + +G V + K++S++ REI+V
Sbjct: 718 ESEHKEYALSTHSEKLAVAFGLMKLPQGATVRVFKNLRICGDCHNAIKFMSKVVGREIVV 777
Query: 411 RDASRFHHFRNGKCSCGDYW 430
RD RFHHF+NG+CSC +YW
Sbjct: 778 RDGKRFHHFKNGECSCRNYW 797
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 145/310 (46%), Gaps = 39/310 (12%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L Y+++G L +++ M + IAW +I+G +GL ED L + MR++G +
Sbjct: 227 TTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQ 286
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLD----VGVISSLISMYSRCGCLDD 125
D+ T+ SVIS+C++ G+Q+HA ++K + D + V ++LI++Y + G +D
Sbjct: 287 VDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDG 346
Query: 126 SVKTFLECEYSDVVLWSSMIAAY-------------------------------GFHGKG 154
+ K F E D++ W+++++ Y +G G
Sbjct: 347 ARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFG 406
Query: 155 EEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC 214
E+A+ LF QM+ +E ND F + ACS G E G + +V L
Sbjct: 407 EQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQLHAQIV-HLGHDSTLSVGNA 465
Query: 215 VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNP 272
++ + RCG ++ A + MP + + W ++++A H A + E++L G+ P
Sbjct: 466 MITMYARCGIVEAARTMFLTMPF-VDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGILP 524
Query: 273 QDAAPYVLLS 282
+LS
Sbjct: 525 DRRTFLTVLS 534
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 126/293 (43%), Gaps = 49/293 (16%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPI--RNVIAWITLIAGKAQNGLAEDVLDQYNL 62
D++A ++L Y G+L ++ P+ R+ + + +I G + ++ +
Sbjct: 78 DVIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRA 137
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQ--QIHAEVVKAGASLDVGVISSLISMYSRC 120
MR F+PD TF SV+S+ S L + Q Q+H VVK G + V+++L+S+Y +C
Sbjct: 138 MRWANFQPDDFTFASVLSA-STLIFYDERQCGQMHGTVVKFGIEIFPAVLNALLSVYVKC 196
Query: 121 G---------CLDDSVKTFLEC-------------------------EYSDV------VL 140
+ + K F E E D +
Sbjct: 197 ASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIA 256
Query: 141 WSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMV 200
W++MI+ Y HG E+A+ LF +M + ++ T+ S++ AC+ G G + ++
Sbjct: 257 WNAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYIL 316
Query: 201 KKYRRKPR---LEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
K R L ++ L + G +D A + MPVK + I W TLLS
Sbjct: 317 KNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVK-DIITWNTLLSG 368
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 84/181 (46%), Gaps = 3/181 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + L G+++ MY + G + + MP + ++W ++IA Q+G ++ Y
Sbjct: 455 GHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAALGQHGHGVKAIELY 514
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSR 119
M G PD+ TF++V+S+CS + +G + +++ G + + +I ++ R
Sbjct: 515 EQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGIAPGEDHYARMIDLFCR 574
Query: 120 CGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
G D+ + + +W +++A HG + I E++ K +D T+V
Sbjct: 575 AGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDLGIEAAEKL-FKLIPQHDGTYVL 633
Query: 179 L 179
L
Sbjct: 634 L 634
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/449 (41%), Positives = 270/449 (60%), Gaps = 24/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G++ D +SL Y K L + KV + P +++A+ ++I +Q GL E+ L Y
Sbjct: 420 GYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMY 479
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ +PD F S+ ++C+ L+ QG+QIH V+K G DV +SL++MY++C
Sbjct: 480 LRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKC 539
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +DD+ F E + +V WS+MI HG G +A+ LF QM + N +T VS+L
Sbjct: 540 GSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVL 599
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+H GL + FF LM K + P EHY C+VD+LGR G LDEA L++ MP +A+
Sbjct: 600 SACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMVLVKEMPFQAS 659
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A +W LL A + HK+ ++ AE +L + P+ + ++LL+NI+AS W V++ R +
Sbjct: 660 AAVWGALLGAARIHKNIELGRHAAEMLLTLEPEKSGTHILLANIYASTGMWDNVAKVRRS 719
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+ VKKEPG+SW+E+K++V+ F +GD+SHPRS EI + L++L + GYVP D
Sbjct: 720 MKNSLVKKEPGMSWIELKDKVYTFIVGDRSHPRSKEIYVKLDDLRERLTSAGYVPMIETD 779
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
+HD++ EKE L HHSEKLA+AF GLI P FK+IS
Sbjct: 780 LHDVEQIEKEQLLWHHSEKLAVAF-----GLIATPPGAPIRVKKNLRVCIDCHTAFKFIS 834
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
++ +REIIVRD +RFHHFR+G CSCGDYW
Sbjct: 835 KVASREIIVRDINRFHHFRDGSCSCGDYW 863
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 146/301 (48%), Gaps = 9/301 (2%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E D G L MY K G L + V LMP ++VI W ++I+G + G + + +
Sbjct: 321 EPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTN 380
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M G ++ T +++ S + G +Q+H +K+G D V +SL+ Y +C
Sbjct: 381 MYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCL 440
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
L+D+ K F C D+V ++SMI AY +G GEEA+ ++ +M+ ++ + + F SL A
Sbjct: 441 LEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNA 500
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
C++ E+G + + V K + +V++ +CG +D+A+ + + + +
Sbjct: 501 CANLSAYEQGKQ-IHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRG-IV 558
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNI-HAS----AKRWQGVS 295
W ++ H A ++ ++L G+ P +LS HA A+R+ G+
Sbjct: 559 SWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLM 618
Query: 296 E 296
E
Sbjct: 619 E 619
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 112/255 (43%), Gaps = 42/255 (16%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
++++W LI+G QNG E+ L Y M ++G + ++ TF SV+ CS L G+QIH
Sbjct: 112 DLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQIH 171
Query: 96 ----------------------------------------AEVVKAGASLDVGVISSLIS 115
++K G D ++L+
Sbjct: 172 RVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLD 231
Query: 116 MYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVT 175
MY++ GC + ++ F E D+V W+++IA H K + A+ L +M + T
Sbjct: 232 MYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFT 291
Query: 176 FVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM 235
S L AC+ GL + G + ++ K +P ++D+ +CG L +A + M
Sbjct: 292 LSSALKACAAIGLVKLGRQLHSALM-KMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLM 350
Query: 236 PVKANAIIWKTLLSA 250
P K + I+W +++S
Sbjct: 351 PXK-DVIVWNSIISG 364
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 127/256 (49%), Gaps = 14/256 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAG---KAQNGLAEDVL 57
G++ D + ++L MY KSG V +P ++++W +IAG +N LA +L
Sbjct: 218 GYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLL 277
Query: 58 DQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMY 117
+ R+ P T S + +C+ + + G+Q+H+ ++K D V LI MY
Sbjct: 278 GKMGSYRVA---PSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMY 334
Query: 118 SRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
S+CG L D+ F DV++W+S+I+ Y G EA++LF M ++ E N T
Sbjct: 335 SKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLS 394
Query: 178 SLLYACSHCGLKEKGM--EFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRN 234
++L S G + G + + +K Y+ + + ++D G+C L++AA +
Sbjct: 395 TILK--STAGSQANGFCEQVHTISIKSGYQYDGYVAN--SLLDSYGKCCLLEDAAKVFEV 450
Query: 235 MPVKANAIIWKTLLSA 250
P + + + + ++++A
Sbjct: 451 CPAE-DLVAYTSMITA 465
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 96/217 (44%), Gaps = 47/217 (21%)
Query: 88 LGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAA 147
+ G IHA +++ G + + L+++YS+C C + K ++ D+V WS++I+
Sbjct: 66 VSSGMAIHARIIRLGLLG---LRNRLVNLYSKCQCFRVARKLVIDSSEPDLVSWSALISG 122
Query: 148 YGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH---------------------- 185
Y +G+GEEA+ + +M + N+ TF S+L CS
Sbjct: 123 YVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQIHRVALVTEMIST 182
Query: 186 ----------------CGLKEK--GMEFFDLMVK-KYRRKPRLEHYTCVVDLLGRCGYLD 226
GL+++ GM+ ++K Y P + ++D+ + G +
Sbjct: 183 GISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSAN--ALLDMYAKSGCPE 240
Query: 227 EAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRI 263
A A+ +P K + + W +++ C H+ D+A ++
Sbjct: 241 AAIAVFYEIP-KPDIVSWNAVIAGCVLHEKNDLALKL 276
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/440 (41%), Positives = 268/440 (60%), Gaps = 14/440 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
++VA +S MY+K G L EKV MP RNV++W +IAG AQNG V + + M+
Sbjct: 429 NVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMK 488
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
GF+PD++T ++++ +C LA L +G+ +HAE VK G D V +SLI MYS+CG +
Sbjct: 489 AEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVA 548
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
++ F + D V W++M+A YG HG G EA++LF++M ++ N++T +++ ACS
Sbjct: 549 EARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACS 608
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
GL ++G E F +M + ++ PR +HY C+VDLLGR G L EA I++MP + + +W
Sbjct: 609 RAGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVW 668
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
LL ACK+H + +A R A IL + P A+ Y+ LSNI+A A RW ++ R M +R
Sbjct: 669 HALLGACKSHNNVQLAERAAHHILELEPSYASVYITLSNIYAQAGRWDDSTKVRRVMDDR 728
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
+KK+ G S +EI ++H F D +HP I LE LT EMK GY PD +HD+
Sbjct: 729 GLKKDRGESSIEIDGRIHTFVAEDCAHPEIDAIHAELETLTKEMKEAGYTPDMRFVLHDV 788
Query: 365 DSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNREIIV 410
D +KE L HHSEKLAIA+ + G + + K+IS+I+ REI+
Sbjct: 789 DDVQKEKALCHHSEKLAIAYGLLKTPSGTPIRIMKNLRVCGDCHTATKFISKIRKREIVA 848
Query: 411 RDASRFHHFRNGKCSCGDYW 430
RDA+RFH+F NG CSCGD+W
Sbjct: 849 RDANRFHYFNNGTCSCGDFW 868
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 149/311 (47%), Gaps = 31/311 (9%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E+D+ G+SL + Y K + E+V R M +R+V+ W ++IA A N D +
Sbjct: 86 GVEIDIYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTF 145
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M P++ITF+S++ +C+ + L +G++IH V G DV V ++LI+MYS+C
Sbjct: 146 ERMTDANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKC 205
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + + F + +VV W+++I A H K EA L+EQM Q N VTFVSLL
Sbjct: 206 GEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLL 265
Query: 181 YACS-----------HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAA 229
+C+ H + E+G+E D++V ++ + +C + EA
Sbjct: 266 NSCNTPEALNRGRRIHSHISERGLE-TDMIVA-----------NALITMYCKCNSVQEAR 313
Query: 230 ALIRNMPVKANAIIWKTLL-----SACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLS 282
+ M K + I W ++ S K +S D ++ E + GV P +L
Sbjct: 314 EIFDRMS-KRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILR 372
Query: 283 NIHASAKRWQG 293
A QG
Sbjct: 373 ACTAHGALEQG 383
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 158/346 (45%), Gaps = 56/346 (16%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAE-----D 55
G E D++ ++L MY K S+ E ++ M R+VI+W +IAG AQ+G + +
Sbjct: 288 GLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDE 347
Query: 56 VLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLD--------- 106
V MR G P+K+TF+S++ +C+ L QG+QIHAE+ K G LD
Sbjct: 348 VFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFN 407
Query: 107 ----------------------VGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSM 144
V +S +SMY +CG L + K F E +VV W+ M
Sbjct: 408 MYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLM 467
Query: 145 IAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYR 204
IA Y +G + L M+ + F+ + VT +++L AC E+G +V
Sbjct: 468 IAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGK-----LVHAEA 522
Query: 205 RKPRLEHYTCV----VDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH----KS 256
K LE T V + + +CG + EA + M + + + W +L+ H ++
Sbjct: 523 VKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNR-DTVAWNAMLAGYGQHGDGLEA 581
Query: 257 TDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMR 302
D+ R+ +E V+P + + L+ + ++ R V E RE R
Sbjct: 582 VDLFKRMLKE--RVSPNE----ITLTAVISACSRAGLVQEGREIFR 621
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 118/235 (50%), Gaps = 5/235 (2%)
Query: 51 GLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVI 110
G + + +++ G + T+ VI C++ G+ +H ++ + G +D+ +
Sbjct: 35 GRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLG 94
Query: 111 SSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFE 170
+SLI+ YS+ + + + F DVV WSSMIAAY + +A + FE+M E
Sbjct: 95 NSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIE 154
Query: 171 ANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAA 230
N +TF+S+L AC++ + EKG + + VK + + T ++ + +CG + A
Sbjct: 155 PNRITFLSILKACNNYSILEKGRKIHTI-VKAMGMETDVAVATALITMYSKCGEISVACE 213
Query: 231 LIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSN 283
+ M + N + W ++ A H+ + A + E++L G++P +A +V L N
Sbjct: 214 VFHKMTER-NVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISP-NAVTFVSLLN 266
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 180/449 (40%), Positives = 281/449 (62%), Gaps = 25/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E DL ++L M++ G L+ + + MP R++++W T+IAG Q+G + D +
Sbjct: 544 GLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYF 603
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+M+ G +PDKITF ++++C+ L +G+++HA + +A DV V + LISMY++C
Sbjct: 604 KMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKC 663
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++D+ + F + +V W+SMIA Y HG+G+EA+ LF QM+Q+ + + +TFV L
Sbjct: 664 GSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGAL 723
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+H GL E+G+ F M K++ +PR+EHY C+VDL GR G L+EA I M V+ +
Sbjct: 724 SACAHAGLIEEGLHHFQSM-KEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPD 782
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+ +W LL AC+ H + ++A + A++ L ++P D +V+LSNI+A+A W+ V++ R+
Sbjct: 783 SRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKV 842
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M +R V K+PG SW+E+ +VH F DK+HP++ EI LE L EM+ GYVPDT
Sbjct: 843 MLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGYVPDTRYV 902
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPF-------------------KYIS 401
+HD++ EKE L +HSE+LAI + GL+ P K+IS
Sbjct: 903 LHDVEDNEKEQALFYHSERLAITY-----GLLKTPPLTPIVISKNLRVCGDCHTATKFIS 957
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+I R+II RD++RFHHF++G CSCGD+W
Sbjct: 958 KITKRQIIARDSNRFHHFKDGVCSCGDFW 986
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 162/285 (56%), Gaps = 6/285 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G++ DL G++L +M++K G + + KV +P R+++ W ++I G A++G + + +
Sbjct: 241 GWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLF 300
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G +PDK+ FVS++ +C+ L QG+++HA + + G ++ V ++++SMY++C
Sbjct: 301 QRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKC 360
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++D+++ F + +VV W++MIA + HG+ +EA F +M + E N VTF+S+L
Sbjct: 361 GSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSIL 420
Query: 181 YACSHCGLKEKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
ACS ++G + D +++ Y R+ T ++ + +CG L +A + + K
Sbjct: 421 GACSSPSALKRGQQIQDHIIEAGYGSDDRVR--TALLSMYAKCGSLKDAHRVFEKIS-KQ 477
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLS 282
N + W +++A H+ D A + +L G+ P + +L+
Sbjct: 478 NVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILN 522
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 143/260 (55%), Gaps = 2/260 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G++ ++ G+++ MY K GS+ + +V L+ RNV++W +IAG AQ+G ++ +
Sbjct: 342 GWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFF 401
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
N M G P+++TF+S++ +CS + L +GQQI +++AG D V ++L+SMY++C
Sbjct: 402 NKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKC 461
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L D+ + F + +VV W++MI AY H + + A+ F+ + ++ + N TF S+L
Sbjct: 462 GSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSIL 521
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
C E G ++ ++ K + L +V + CG L A L +MP K +
Sbjct: 522 NVCKSSDSLELG-KWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMP-KRD 579
Query: 241 AIIWKTLLSACKTHKSTDMA 260
+ W T+++ H +A
Sbjct: 580 LVSWNTIIAGFVQHGKNQVA 599
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 149/271 (54%), Gaps = 8/271 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + D+ ++L +MY K G+ + +++ M ++V +W L+ G Q+GL E+ +
Sbjct: 140 GVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLH 199
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M +PDK TFVS++++C++ + +G++++ ++KAG D+ V ++LI+M+ +C
Sbjct: 200 EQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKC 259
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + D+ K F D+V W+SMI HG+ ++A NLF++ME++ + + V FVSLL
Sbjct: 260 GDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLL 319
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+H E+G + M K+ + T ++ + +CG +++A + ++ N
Sbjct: 320 RACNHPEALEQGKKVHARM-KEVGWDTEIYVGTAILSMYTKCGSMEDALEVF-DLVKGRN 377
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVN 271
+ W +++ H GRI E L N
Sbjct: 378 VVSWTAMIAGFAQH------GRIDEAFLFFN 402
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 128/254 (50%), Gaps = 2/254 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ D ++L MY K GSL + +V + +NV+AW +I Q+ ++ L +
Sbjct: 443 GYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATF 502
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ G +P+ TF S+++ C +L G+ +H ++KAG D+ V ++L+SM+ C
Sbjct: 503 QALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNC 562
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L + F + D+V W+++IA + HGK + A + F+ M++ + + +TF LL
Sbjct: 563 GDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLL 622
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+ +G L+ + L T ++ + +CG +++A + +P K N
Sbjct: 623 NACASPEALTEGRRLHALITEAAFDCDVLVG-TGLISMYTKCGSIEDAHQVFHKLP-KKN 680
Query: 241 AIIWKTLLSACKTH 254
W ++++ H
Sbjct: 681 VYSWTSMIAGYAQH 694
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 113/212 (53%), Gaps = 8/212 (3%)
Query: 74 TFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLEC 133
T+ +++ C + LG G++I+ + K+G D+ + ++LI+MY++CG + + F +
Sbjct: 112 TYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDM 171
Query: 134 EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGM 193
DV W+ ++ Y HG EEA L EQM Q + + TFVS+L AC+ +KG
Sbjct: 172 REKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGR 231
Query: 194 EFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKT 253
E ++L++K L T ++++ +CG + +A + N+P + + + W ++++
Sbjct: 232 ELYNLILKA-GWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTR-DLVTWTSMITGLAR 289
Query: 254 H----KSTDMAGRIAEEILGVNPQDAAPYVLL 281
H ++ ++ R+ EE GV P A LL
Sbjct: 290 HGRFKQACNLFQRMEEE--GVQPDKVAFVSLL 319
>gi|449517557|ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 369 bits (947), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 188/444 (42%), Positives = 270/444 (60%), Gaps = 24/444 (5%)
Query: 6 LVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRM 65
+V +++ YMK G + E++ + M ++N++ W ++IAG +N AED L + M
Sbjct: 229 VVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIE 288
Query: 66 VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD 125
RP+ ++ SV+ CS L+ L G+Q+H V K+ S D +SLISMY +CG LD
Sbjct: 289 SRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDS 348
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
+ K FLE DV+ W++MI+ Y HG G +A++LF++M + + +TFV+++ AC+H
Sbjct: 349 AWKLFLEMPRKDVISWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNH 408
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
G + G+++F M K++ + + HYTCV+DLLGR G LDEA +LI+ MP K +A I+
Sbjct: 409 AGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFKPHAAIYG 468
Query: 246 TLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERN 305
TLL AC+ HK+ D+A A +L ++P A YV L+NI+A+ +W V++ R+ M+E N
Sbjct: 469 TLLGACRIHKNLDLAEFAARNLLNLDPTSATGYVQLANIYAATNKWDQVAKVRKMMKEHN 528
Query: 306 VKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMD 365
V K PG SW+EIK+ H+F D+ HP I L EL +MKL GYVPD +HD++
Sbjct: 529 VVKIPGYSWIEIKSVTHEFRSSDRLHPELTSIHKKLNELDGKMKLAGYVPDLEFALHDVE 588
Query: 366 SEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNR 406
E KE L HSEKLAIAF GL+ P K+IS I+ R
Sbjct: 589 EEHKEKLLLWHSEKLAIAF-----GLMKTAPGTPIRVFKNLRVCGDCHRAIKFISAIEKR 643
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EIIVRD +RFHHFRNG CSCGDYW
Sbjct: 644 EIIVRDTTRFHHFRNGFCSCGDYW 667
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 146/317 (46%), Gaps = 26/317 (8%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E D V+ + + Y++S + MP++++ +W TLI+G AQNG + D +++
Sbjct: 133 EPDSVSYNIMLVCYLRSYGVEAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSV 192
Query: 63 MRMVGFRPDK--ITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M P+K +++ ++IS E L ++++ V V V +++++ Y +
Sbjct: 193 M------PEKNGVSWSAMISGYVEHGDLEAAEELYKNV----GMKSVVVETAMLTGYMKF 242
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ + + F ++V W+SMIA Y + + E+ + +F+ M + N ++ S+L
Sbjct: 243 GKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVL 302
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
CS+ G + L+ K K T ++ + +CG LD A L MP K +
Sbjct: 303 LGCSNLSALPLGRQMHQLVSKSPLSKDTTA-CTSLISMYCKCGDLDSAWKLFLEMPRK-D 360
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEIL-----GVNPQDAAPY--VLLSNIHASAKRWQG 293
I W ++S H AGR A + G D + V+L+ HA G
Sbjct: 361 VISWNAMISGYAQHG----AGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVD-LG 415
Query: 294 VSEFREAMRERNVKKEP 310
V F+ +E ++ +P
Sbjct: 416 VQYFKSMKKEFGIEAKP 432
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 2/149 (1%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D A +SL MY K G L K+ MP ++VI+W +I+G AQ+G L ++ MR
Sbjct: 329 DTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVISWNAMISGYAQHGAGRKALHLFDKMR 388
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSRCGCL 123
+PD ITFV+VI +C+ + G Q + K G + +I + R G L
Sbjct: 389 NGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRL 448
Query: 124 DDSVKTFLECEYSD-VVLWSSMIAAYGFH 151
D++V E + ++ +++ A H
Sbjct: 449 DEAVSLIKEMPFKPHAAIYGTLLGACRIH 477
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 185/445 (41%), Positives = 278/445 (62%), Gaps = 15/445 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ +L +SL MY K G L E K+ +P R+V+ W ++ G AQ G ++ ++ +
Sbjct: 279 GYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLF 338
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G +PDK+TF SV++SCS A L +G++IH ++V AG +LDV + S+L+SMY++C
Sbjct: 339 RRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKC 398
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAY-GFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G +DD+ F + +VV W+++I HG+ EA+ F+QM+++ + + VTF S+
Sbjct: 399 GSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSV 458
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L AC+H GL E+G + F M Y KP +EHY+C VDLLGR G+L+EA +I +MP
Sbjct: 459 LSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIP 518
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
+W LLSAC+ H + R AE +L ++P D YV LS+I+A+A R++ + R+
Sbjct: 519 GPSVWGALLSACRVHSDVERGERAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKVRQ 578
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M +R+V KEPG SW+E+ +VH F + DKSHP S +I + L +LT ++K GYVPDT
Sbjct: 579 VMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPESEQIYVELGKLTEQIKEMGYVPDTRF 638
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKN 405
+HD+D E+KE L HSE+LAI + + G+ + + K+IS++
Sbjct: 639 VLHDVDEEQKERILFSHSERLAITYGLMKTPPGMPIRIVKNLRVCGDCHTATKFISKVVG 698
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
REII RDA RFHHF +G CSCGD+W
Sbjct: 699 REIIARDAQRFHHFADGVCSCGDFW 723
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 143/252 (56%), Gaps = 4/252 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G EL+ G+SL MY K G + + + +P +NV+ W LIAG AQ G + L+
Sbjct: 178 GLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELL 237
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ P+KITF S++ C+ A L G+++H ++++G ++ V++SLI+MY +C
Sbjct: 238 ETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKC 297
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L+++ K F + + DVV W++M+ Y G +EAINLF +M+Q+ + + +TF S+L
Sbjct: 298 GGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVL 357
Query: 181 YACSHCGLKEKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
+CS ++G +V Y L+ + +V + +CG +D+ A+L+ N +
Sbjct: 358 TSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQ--SALVSMYAKCGSMDD-ASLVFNQMSER 414
Query: 240 NAIIWKTLLSAC 251
N + W +++ C
Sbjct: 415 NVVAWTAIITGC 426
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 129/242 (53%), Gaps = 4/242 (1%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L MY K GSL + +V + RN+++W +I + Y M++ G +
Sbjct: 86 NTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCK 145
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
PDK+TFVS++++ + L GQ++H E+V+AG L+ V +SL+ MY++CG + +
Sbjct: 146 PDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVI 205
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F +VV W+ +IA Y G+ + A+ L E M+Q E N +TF S+L C+
Sbjct: 206 FDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAAL 265
Query: 190 EKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
E G + +++ Y R+ L ++ + +CG L+EA L ++P + + + W ++
Sbjct: 266 EHGKKVHRYIIQSGYGRE--LWVVNSLITMYCKCGGLEEARKLFSDLPHR-DVVTWTAMV 322
Query: 249 SA 250
+
Sbjct: 323 TG 324
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 114/220 (51%), Gaps = 4/220 (1%)
Query: 49 QNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVG 108
+ G ++ L N M + G R F ++ C+ L +L QG+++HA ++K+G +
Sbjct: 24 KTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRY 83
Query: 109 VISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE 168
+ ++L+SMY++CG L D+ + F ++V W++MI A+ K EA +E M+
Sbjct: 84 LENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAG 143
Query: 169 FEANDVTFVSLLYACSHCGLKEKGMEF-FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDE 227
+ + VTFVSLL A ++ L + G + +++ +PR+ T +V + +CG + +
Sbjct: 144 CKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVG--TSLVGMYAKCGDISK 201
Query: 228 AAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEI 267
A + +P K N + W L++ D+A + E +
Sbjct: 202 ARVIFDRLPEK-NVVTWTLLIAGYAQQGQVDVALELLETM 240
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 368 bits (944), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 179/449 (39%), Positives = 280/449 (62%), Gaps = 25/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E DL ++L M++ G L+ + + MP R++++W T+IAG Q+G + D +
Sbjct: 544 GLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYF 603
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+M+ G +PDKITF ++++C+ L +G+++HA + +A DV V + LISMY++C
Sbjct: 604 KMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKC 663
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++D+ + F + +V W+SMI Y HG+G+EA+ LF QM+Q+ + + +TFV L
Sbjct: 664 GSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGAL 723
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+H GL E+G+ F M K++ +PR+EHY C+VDL GR G L+EA I M V+ +
Sbjct: 724 SACAHAGLIEEGLHHFQSM-KEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPD 782
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+ +W LL AC+ H + ++A + A++ L ++P D +V+LSNI+A+A W+ V++ R+
Sbjct: 783 SRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKV 842
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M +R V K+PG SW+E+ +VH F DK+HP++ EI LE L EM+ GYVPDT
Sbjct: 843 MLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGYVPDTRYV 902
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPF-------------------KYIS 401
+HD++ EKE L +HSE+LAI + GL+ P K+IS
Sbjct: 903 LHDVEDNEKEQALFYHSERLAITY-----GLLKTPPLTPIVISKNLRVCGDCHTATKFIS 957
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+I R+II RD++RFHHF++G CSCGD+W
Sbjct: 958 KITKRQIIARDSNRFHHFKDGVCSCGDFW 986
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 162/285 (56%), Gaps = 6/285 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G++ DL G++L +M++K G + + KV +P R+++ W ++I G A++G + + +
Sbjct: 241 GWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLF 300
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G +PDK+ FVS++ +C+ L QG+++HA + + G ++ V ++++SMY++C
Sbjct: 301 QRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKC 360
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++D+++ F + +VV W++MIA + HG+ +EA F +M + E N VTF+S+L
Sbjct: 361 GSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSIL 420
Query: 181 YACSHCGLKEKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
ACS ++G + D +++ Y R+ T ++ + +CG L +A + + K
Sbjct: 421 GACSSPSALKRGQQIQDHIIEAGYGSDDRVR--TALLSMYAKCGSLKDAHRVFEKIS-KQ 477
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLS 282
N + W +++A H+ D A + +L G+ P + +L+
Sbjct: 478 NVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILN 522
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 143/260 (55%), Gaps = 2/260 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G++ ++ G+++ MY K GS+ + +V L+ RNV++W +IAG AQ+G ++ +
Sbjct: 342 GWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFF 401
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
N M G P+++TF+S++ +CS + L +GQQI +++AG D V ++L+SMY++C
Sbjct: 402 NKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKC 461
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L D+ + F + +VV W++MI AY H + + A+ F+ + ++ + N TF S+L
Sbjct: 462 GSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSIL 521
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
C E G ++ ++ K + L +V + CG L A L +MP K +
Sbjct: 522 NVCKSSDSLELG-KWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMP-KRD 579
Query: 241 AIIWKTLLSACKTHKSTDMA 260
+ W T+++ H +A
Sbjct: 580 LVSWNTIIAGFVQHGKNQVA 599
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 149/271 (54%), Gaps = 8/271 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + D+ ++L +MY K G+ + +++ M ++V +W L+ G Q+GL E+ +
Sbjct: 140 GVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLH 199
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M +PDK TFVS++++C++ + +G++++ ++KAG D+ V ++LI+M+ +C
Sbjct: 200 EQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKC 259
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + D+ K F D+V W+SMI HG+ ++A NLF++ME++ + + V FVSLL
Sbjct: 260 GDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLL 319
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+H E+G + M K+ + T ++ + +CG +++A + ++ N
Sbjct: 320 RACNHPEALEQGKKVHARM-KEVGWDTEIYVGTAILSMYTKCGSMEDALEVF-DLVKGRN 377
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVN 271
+ W +++ H GRI E L N
Sbjct: 378 VVSWTAMIAGFAQH------GRIDEAFLFFN 402
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 152/316 (48%), Gaps = 15/316 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ D ++L MY K GSL + +V + +NV+AW +I Q+ ++ L +
Sbjct: 443 GYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATF 502
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ G +P+ TF S+++ C +L G+ +H ++KAG D+ V ++L+SM+ C
Sbjct: 503 QALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNC 562
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L + F + D+V W+++IA + HGK + A + F+ M++ + + +TF LL
Sbjct: 563 GDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLL 622
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+ +G L+ + L T ++ + +CG +++A + +P K N
Sbjct: 623 NACASPEALTEGRRLHALITEAAFDCDVLVG-TGLISMYTKCGSIEDAHQVFHKLP-KKN 680
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEIL------GVNPQDAAPYVLLSNIHASAKRWQGV 294
W ++++ H G+ A E+ GV P LS + +G+
Sbjct: 681 VYSWTSMITGYAQHGR----GKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGL 736
Query: 295 SEFREAMRERNVKKEP 310
F ++M+E N+ EP
Sbjct: 737 HHF-QSMKEFNI--EP 749
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 113/212 (53%), Gaps = 8/212 (3%)
Query: 74 TFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLEC 133
T+ +++ C + LG G++I+ + K+G D+ + ++LI+MY++CG + + F +
Sbjct: 112 TYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDM 171
Query: 134 EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGM 193
DV W+ ++ Y HG EEA L EQM Q + + TFVS+L AC+ +KG
Sbjct: 172 REKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGR 231
Query: 194 EFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKT 253
E ++L++K L T ++++ +CG + +A + N+P + + + W ++++
Sbjct: 232 ELYNLILKA-GWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTR-DLVTWTSMITGLAR 289
Query: 254 H----KSTDMAGRIAEEILGVNPQDAAPYVLL 281
H ++ ++ R+ EE GV P A LL
Sbjct: 290 HGRFKQACNLFQRMEEE--GVQPDKVAFVSLL 319
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 368 bits (944), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 178/444 (40%), Positives = 282/444 (63%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G++ D+ GSSL MY K + + +V ++P + I+W ++IAG QNG+ ++ L +
Sbjct: 266 GYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFF 325
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M + +P+ ++F S++ +C+ L TL G+Q+H ++++ +V + S+L+ MY++C
Sbjct: 326 QQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKC 385
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + F + E D+V W++MI Y HG +AI+LF++ME + + N V F+++L
Sbjct: 386 GNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVL 445
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL ++ ++F+ M + YR P LEHY V DLLGR G L+EA I +M ++
Sbjct: 446 TACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPT 505
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+W TLL+AC+ HK+ ++A ++++++ V+PQ+ YVLLSNI+++A RW+ + R A
Sbjct: 506 GSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIA 565
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
MR++ +KK+P SW+EIKN+VH F GDKSHP I+ L+ L +M+ GYV DT
Sbjct: 566 MRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQMEREGYVLDTTEV 625
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA----------EHTRGLIVML----PFKYISEIKNR 406
+HD++ E+K Y L HSE+LAI F T+ L V + K+IS+I R
Sbjct: 626 LHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTKNLRVCVDCHTATKFISKIVGR 685
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EI+VRD SRFHHF++GKCSCGD+W
Sbjct: 686 EIVVRDNSRFHHFKDGKCSCGDFW 709
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 133/265 (50%), Gaps = 7/265 (2%)
Query: 20 GSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVI 79
GSL KV +MP R++++W T+I+G AQNG+ ED L M RPD T SV+
Sbjct: 187 GSL---RKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVL 243
Query: 80 SSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVV 139
+E L +G++IH ++ G DV + SSLI MY++C +DDS + F D +
Sbjct: 244 PIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGI 303
Query: 140 LWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLM 199
W+S+IA +G +E + F+QM + + N V+F S++ AC+H G + +
Sbjct: 304 SWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYI 363
Query: 200 VKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDM 259
++ R + + +VD+ +CG + A + M + + + W ++ H
Sbjct: 364 IRS-RFDGNVFIASALVDMYAKCGNIRTARWIFDKMEL-YDMVSWTAMIMGYALHGHAYD 421
Query: 260 AGRIAE--EILGVNPQDAAPYVLLS 282
A + + E+ GV P A +L+
Sbjct: 422 AISLFKRMEVEGVKPNYVAFMAVLT 446
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 113/263 (42%), Gaps = 33/263 (12%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
+AW ++I +GL L + M G PD F SV+ SC+ + L G+ +H
Sbjct: 70 TTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVH 129
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDD---SVKTFLECEYSDV-------------- 138
+++ G D+ ++L++MYS+ L++ K F E + SDV
Sbjct: 130 GCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSL 189
Query: 139 ------------VLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHC 186
V W+++I+ +G E+A+ + +M + + T S+L +
Sbjct: 190 RKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEY 249
Query: 187 GLKEKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
KG E ++ Y + + ++D+ +C +D++ + +P + + I W
Sbjct: 250 VNLLKGKEIHGYAIRNGYDADVFIG--SSLIDMYAKCTRVDDSCRVFYMLP-QHDGISWN 306
Query: 246 TLLSACKTHKSTDMAGRIAEEIL 268
++++ C + D + +++L
Sbjct: 307 SIIAGCVQNGMFDEGLKFFQQML 329
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
Query: 77 SVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYS 136
+++ + S + + Q +Q+HA++++ ++S+++S+YS L DS+ F
Sbjct: 10 TLLQNPSSVKSKSQAKQLHAQILRTSLP-SPSLLSTILSIYSNLNLLHDSLLIFNSLPSP 68
Query: 137 DVVL-WSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
L W S+I Y HG +++ F QM + F S+L +C+
Sbjct: 69 PTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCT 117
>gi|449458990|ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 367 bits (943), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 187/444 (42%), Positives = 269/444 (60%), Gaps = 24/444 (5%)
Query: 6 LVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRM 65
+V +++ YMK G + E++ + M ++N++ W ++IAG +N AED L + M
Sbjct: 229 VVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIE 288
Query: 66 VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD 125
RP+ ++ SV+ CS L+ L G+Q+H V K+ S D +SLISMY +CG LD
Sbjct: 289 SRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDS 348
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
+ K FLE DV+ W++MI+ Y HG G +A++LF++M + + +TFV+++ AC+H
Sbjct: 349 AWKLFLEMPRKDVITWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNH 408
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
G + G+++F M K++ + + HYTCV+DLLGR G LDEA +LI+ MP +A I+
Sbjct: 409 AGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFTPHAAIYG 468
Query: 246 TLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERN 305
TLL AC+ HK+ D+A A +L ++P A YV L+NI+A+ +W V++ R+ M+E N
Sbjct: 469 TLLGACRIHKNLDLAEFAARNLLNLDPTSATGYVQLANIYAATNKWDQVAKVRKMMKEHN 528
Query: 306 VKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMD 365
V K PG SW+EIK+ H+F D+ HP I L EL +MKL GYVPD +HD++
Sbjct: 529 VVKIPGYSWIEIKSVTHEFRSSDRLHPELTSIHKKLNELDGKMKLAGYVPDLEFALHDVE 588
Query: 366 SEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNR 406
E KE L HSEKLAIAF GL+ P K+IS I+ R
Sbjct: 589 EEHKEKLLLWHSEKLAIAF-----GLMKTAPGTPIRVFKNLRVCGDCHRAIKFISAIEKR 643
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EIIVRD +RFHHFRNG CSCGDYW
Sbjct: 644 EIIVRDTTRFHHFRNGFCSCGDYW 667
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 146/317 (46%), Gaps = 26/317 (8%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E D V+ + + Y++S + MP++++ +W TLI+G AQNG + D +++
Sbjct: 133 EPDSVSYNIMLVCYLRSYGVKAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSV 192
Query: 63 MRMVGFRPDK--ITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M P+K +++ ++IS E L ++++ V V V +++++ Y +
Sbjct: 193 M------PEKNGVSWSAMISGYVEHGDLEAAEELYKNV----GMKSVVVETAMLTGYMKF 242
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ + + F ++V W+SMIA Y + + E+ + +F+ M + N ++ S+L
Sbjct: 243 GKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVL 302
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
CS+ G + L+ K K T ++ + +CG LD A L MP K +
Sbjct: 303 LGCSNLSALPLGRQMHQLVSKSPLSKDTTA-CTSLISMYCKCGDLDSAWKLFLEMPRK-D 360
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEIL-----GVNPQDAAPY--VLLSNIHASAKRWQG 293
I W ++S H AGR A + G D + V+L+ HA G
Sbjct: 361 VITWNAMISGYAQHG----AGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVD-LG 415
Query: 294 VSEFREAMRERNVKKEP 310
V F+ +E ++ +P
Sbjct: 416 VQYFKSMKKEFGIEAKP 432
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 2/149 (1%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D A +SL MY K G L K+ MP ++VI W +I+G AQ+G L ++ MR
Sbjct: 329 DTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVITWNAMISGYAQHGAGRKALHLFDKMR 388
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSRCGCL 123
+PD ITFV+VI +C+ + G Q + K G + +I + R G L
Sbjct: 389 NGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRL 448
Query: 124 DDSVKTFLECEYSD-VVLWSSMIAAYGFH 151
D++V E ++ ++ +++ A H
Sbjct: 449 DEAVSLIKEMPFTPHAAIYGTLLGACRIH 477
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 367 bits (943), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 185/445 (41%), Positives = 270/445 (60%), Gaps = 24/445 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
++VA +SL MY+K G L EKV M RNV++W +IAG AQ+G V + + M+
Sbjct: 451 NVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMK 510
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+ GF+PD++T +S++ +C L+ L +G+ +HAE VK G D V +SLI MYS+CG +
Sbjct: 511 VEGFQPDRVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVT 570
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
++ F + D V W++M+A YG HG G EA++LF++M ++ N++TF +++ AC
Sbjct: 571 EARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACG 630
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
GL ++G E F +M + +R KP +HY C+VDLLGR G L EA I+ MP + + +W
Sbjct: 631 RAGLVQEGREIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVW 690
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
LL ACK+H + +A A IL + P +A+ YV LSNI+A A RW ++ R+ M ++
Sbjct: 691 HALLGACKSHDNVQLAEWAAHHILRLEPSNASVYVTLSNIYAQAGRWDDSTKVRKVMDDK 750
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
+KK+ G S +EI ++H F D +HP I LE LT EMK GY PD +HD+
Sbjct: 751 GLKKDRGESSIEIDGRIHTFVAEDCAHPEIDSIHAELEMLTKEMKEAGYTPDMRFVLHDV 810
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKN 405
D +KE L HHSEKLAIA+ GL+ P K+IS+I+
Sbjct: 811 DEVQKERALCHHSEKLAIAY-----GLLKTPPGTPIRIMKNLRVCGDCHTATKFISKIRK 865
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
REI+ RDA+RFH+F+NG CSCGD+W
Sbjct: 866 REIVARDANRFHYFKNGTCSCGDFW 890
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/254 (32%), Positives = 135/254 (53%), Gaps = 7/254 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E D+ ++L MY K G + ++ + M RNV++W +I AQ+ + + Y
Sbjct: 209 GMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELY 268
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G P+ +TFVS+++SC+ L +G++IH+ + + G DV V ++LI+MY +C
Sbjct: 269 EKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKC 328
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAY---GFHGKG--EEAINLFEQMEQKEFEANDVT 175
C+ D+ +TF DV+ WS+MIA Y G+ K +E L E+M ++ N VT
Sbjct: 329 NCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVT 388
Query: 176 FVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM 235
F+S+L ACS G E+G + + K R T + ++ +CG + EA + M
Sbjct: 389 FMSILKACSVHGALEQGRQIHAEISKVGFESDR-SLQTAIFNMYAKCGSIYEAEQVFSKM 447
Query: 236 PVKANAIIWKTLLS 249
K N + W +LL+
Sbjct: 448 ENK-NVVAWASLLT 460
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/417 (26%), Positives = 185/417 (44%), Gaps = 68/417 (16%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +D+ G+SL + Y K G + E+V R M +R+V+ W ++IA A N D +
Sbjct: 108 GLAIDIYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTF 167
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ P++ITF+S++ +C+ + L + ++IH V +G DV V ++LI+MYS+C
Sbjct: 168 ERMKDANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKC 227
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + + F + + +VV W+++I A H K EA L+E+M Q N VTFVSLL
Sbjct: 228 GEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLL 287
Query: 181 YACS-----------HCGLKEKGM------------------------EFFDLMVKKYRR 205
+C+ H + E+G+ E FD M K+
Sbjct: 288 NSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKR--- 344
Query: 206 KPRLEHYTCVVDLLGRCGY-----LDEAAALIRNM---PVKANAIIWKTLLSACKTHKST 257
+ ++ ++ + GY LDE L+ M V N + + ++L AC H +
Sbjct: 345 --DVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGAL 402
Query: 258 DMAGRIAEEILGVN-PQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNV---------- 306
+ +I EI V D + + N++A + M +NV
Sbjct: 403 EQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMY 462
Query: 307 -------KKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPD 356
E S + +N V + + + +S +I EL S MK+ G+ PD
Sbjct: 463 IKCGDLTSAEKVFSEMSTRNVV-SWNLMIAGYAQSGDIAKVF-ELLSSMKVEGFQPD 517
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 158/357 (44%), Gaps = 58/357 (16%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAE-----D 55
G E D+V ++L MY K + + + M R+VI+W +IAG AQ+G + +
Sbjct: 310 GLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDE 369
Query: 56 VLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLD--------- 106
V MR G P+K+TF+S++ +CS L QG+QIHAE+ K G D
Sbjct: 370 VFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFN 429
Query: 107 ----------------------VGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSM 144
V +SL++MY +CG L + K F E +VV W+ M
Sbjct: 430 MYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLM 489
Query: 145 IAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYR 204
IA Y G + L M+ + F+ + VT +S+L AC E+G +V
Sbjct: 490 IAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERGK-----LVHAEA 544
Query: 205 RKPRLEHYTCV----VDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH----KS 256
K LE T V + + +CG + EA + + + + + W +L+ H ++
Sbjct: 545 VKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNR-DTVAWNAMLAGYGQHGIGPEA 603
Query: 257 TDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMR--ERNVKKEPG 311
D+ R+ +E + N + + + ++ R V E RE R + + + +PG
Sbjct: 604 VDLFKRMLKERVPPNE------ITFTAVISACGRAGLVQEGREIFRIMQEDFRMKPG 654
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 122/235 (51%), Gaps = 5/235 (2%)
Query: 51 GLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVI 110
G ++ + +++ G + T+ +I C++L G+ +H ++ + G ++D+ +
Sbjct: 57 GRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLG 116
Query: 111 SSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFE 170
+SLI+ YS+ G + + F DVV WSSMIAAY + +A + FE+M+ E
Sbjct: 117 NSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIE 176
Query: 171 ANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAA 230
N +TF+S+L AC++ + EK E + VK + + T ++ + +CG + A
Sbjct: 177 PNRITFLSILKACNNYSMLEKAREIHTV-VKASGMETDVAVATALITMYSKCGEISLACE 235
Query: 231 LIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSN 283
+ + M + N + W ++ A H+ + A + E++L G++P +A +V L N
Sbjct: 236 IFQKMKER-NVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISP-NAVTFVSLLN 288
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 79/156 (50%), Gaps = 8/156 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E D V +SL MY K G + E V + R+ +AW ++AG Q+G+ + +D +
Sbjct: 548 GLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLF 607
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV--ISSLISMYS 118
M P++ITF +VIS+C + +G++I +++ + G ++ +
Sbjct: 608 KRMLKERVPPNEITFTAVISACGRAGLVQEGREIF-RIMQEDFRMKPGKQHYGCMVDLLG 666
Query: 119 RCGCLDDSVKTFLE---CEYSDVVLWSSMIAAYGFH 151
R G L ++ + F++ CE D+ +W +++ A H
Sbjct: 667 RAGRLQEA-EEFIQRMPCE-PDISVWHALLGACKSH 700
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 367 bits (942), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 179/444 (40%), Positives = 273/444 (61%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE + ++L HMY G K+ LM RN++ W ++I G A NG + L +
Sbjct: 170 GFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLF 229
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M + G PD T VS++S+C+EL L G++ H +VK G ++ ++L+ +Y++C
Sbjct: 230 REMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKC 289
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + K F E E VV W+S+I +G G+EA+ LF+++E+K +++TFV +L
Sbjct: 290 GSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVL 349
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
YACSHCG+ ++G ++F M ++Y P++EHY C+VDLLGR G + +A I+NMP++ N
Sbjct: 350 YACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPN 409
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A++W+TLL AC H + ++L + P+ + YVLLSN++AS +RW V + R
Sbjct: 410 AVVWRTLLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDVHKVRRT 469
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M VKK PG S +E++N++H+F MGD+SHP++ EI + L E+T +KL GYVP
Sbjct: 470 MLREGVKKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEITKLLKLEGYVPHISNV 529
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVM------------LPFKYISEIKNR 406
+ D++ EEKE L +HSEK+AIAF G+ + L K IS++ +R
Sbjct: 530 LADIEEEEKETALSYHSEKIAIAFMLINTAAGIPIRVVKNLRVCADCHLAIKLISKVFDR 589
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EI+VRD SRFHHF++G CSC DYW
Sbjct: 590 EIVVRDRSRFHHFKDGHCSCKDYW 613
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 2/213 (0%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
N+ W T+I G A++ L+ Y M + PD T+ ++ + ++L + +G+++H
Sbjct: 104 NIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVH 163
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGE 155
+ ++ G V V ++L+ MY+ CG + + K F ++V W+S+I Y +G+
Sbjct: 164 SIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPN 223
Query: 156 EAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV 215
EA+ LF +M + E + T VSLL AC+ G G MV K L +
Sbjct: 224 EALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMV-KVGLDGNLHAGNAL 282
Query: 216 VDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
+DL +CG + +A + M K+ + W +L+
Sbjct: 283 LDLYAKCGSIRQAHKVFDEMEEKS-VVSWTSLI 314
>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 367 bits (942), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 186/444 (41%), Positives = 275/444 (61%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +LD ++L MY K + + + M R+++ W +I G A+ G A + L +
Sbjct: 866 GLDLDHFVCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLF 925
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ MR G PDK+ V+V+ +C++L + + + I + + LDV + +++I M+++C
Sbjct: 926 DKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKC 985
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
GC++ + + F E +V+ WS+MIAAYG+HG+G +A++LF M + N +T VSLL
Sbjct: 986 GCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLL 1045
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
YACSH GL E+G+ FF M + Y + ++HYTCVVDLLGR G LDEA LI +M + +
Sbjct: 1046 YACSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKD 1105
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+W L AC+THK +A + A +L + PQ+ Y+LLSNI+A+A RW+ V++ R+
Sbjct: 1106 EGLWGAFLGACRTHKDVXLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKIRDL 1165
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M +R +KK PG +W+E+ N+ HQF++GD +HPRS EI L+ L ++++L GYVPDT
Sbjct: 1166 MSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFV 1225
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA-----EHTRGLIVM---------LPFKYISEIKNR 406
+HD+D E K L HSEKLAIAF EHT I+ K +S I R
Sbjct: 1226 LHDVDEELKIGILYTHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGR 1285
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
IIVRDA+RFHHF+ G CSCGDYW
Sbjct: 1286 VIIVRDANRFHHFKEGACSCGDYW 1309
Score = 325 bits (832), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 163/413 (39%), Positives = 255/413 (61%), Gaps = 12/413 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +LD ++L MY+K + + + M R+++ W +I G A+ G A + L +
Sbjct: 190 GLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLF 249
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
MR G PDK+ V+V+ +C++L + + + I + + LDV + +++I MY++C
Sbjct: 250 EKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKC 309
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
GC++ + + F E +V+ WS+MIAAYG+HG+G +A++LF M + +T SLL
Sbjct: 310 GCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLL 369
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
YACSH GL E+G+ FF M + Y + ++HYTCVVDLLGR G LDEA LI++M ++ +
Sbjct: 370 YACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKD 429
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+W L AC+THK +A + A +L + Q+ YVLLSNI+A+A RW+ V++ R+
Sbjct: 430 EGLWGAFLGACRTHKDVVLAEKAATSLLELQSQNPGHYVLLSNIYANAGRWEDVAKIRDL 489
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M +R +KK PG +W+E+ N+ HQF++GD +HPRS EI L+ L+++++L GYVPDT
Sbjct: 490 MSQRRLKKTPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLSNKLELVGYVPDTNFV 549
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA-----EHTRGLIVMLPFKYISEIKNREI 408
+HD+D E K L HSEKLAIAF EHT P + I ++ +++
Sbjct: 550 LHDVDEELKIGILYTHSEKLAIAFGLIATPEHT-------PIRIIKNLREKKL 595
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 125/250 (50%), Gaps = 2/250 (0%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
++V + L + Y +L + + M +R+ ++W ++ G A+ G + + +
Sbjct: 93 NIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELI 152
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G RPD T VI +C +L L G+ IH V K G LD V ++L+ MY +C ++
Sbjct: 153 RCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIE 212
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D+ F + + D+V W+ MI Y GK E++ LFE+M ++ + V V++++AC+
Sbjct: 213 DARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACA 272
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
G K D +++ + + + T ++D+ +CG ++ A + M K N I W
Sbjct: 273 KLGAMHKA-RIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEK-NVISW 330
Query: 245 KTLLSACKTH 254
+++A H
Sbjct: 331 SAMIAAYGYH 340
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 124/256 (48%), Gaps = 6/256 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +L+ + L Y +L + + M +R+ ++W ++ G A+ G + +
Sbjct: 765 GMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTF 824
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ G RPD T VI +C +L L G+ IH V K G LD V ++L+ MY +C
Sbjct: 825 RELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKC 884
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
++D+ F + D+V W+ MI Y G E++ LF++M ++ + V V+++
Sbjct: 885 REIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVV 944
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY--TCVVDLLGRCGYLDEAAALIRNMPVK 238
+AC+ G K D + R+K +L+ T ++D+ +CG ++ A + M K
Sbjct: 945 FACAKLGAMHKARTIDDYI---QRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEK 1001
Query: 239 ANAIIWKTLLSACKTH 254
N I W +++A H
Sbjct: 1002 -NVISWSAMIAAYGYH 1016
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 97/221 (43%), Gaps = 18/221 (8%)
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
++S + +C L Q +Q+HA+ G ++ V + LI YS LDD+ F
Sbjct: 65 YISALVNCRNLT---QVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMC 121
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGME 194
D V WS M+ + G F ++ + ++ T ++ AC + G
Sbjct: 122 VRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRL 181
Query: 195 FFDLMVKKYRRKPRLEHYTC--VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA-- 250
++ Y+ L+H+ C +VD+ +C +++A L M + + + W ++
Sbjct: 182 IHHIV---YKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQER-DLVTWTVMIGGYA 237
Query: 251 -C-KTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAK 289
C K ++S + ++ EE GV P A +++ + A AK
Sbjct: 238 ECGKANESLVLFEKMREE--GVVPDKVA---MVTVVFACAK 273
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 90/210 (42%), Gaps = 15/210 (7%)
Query: 86 ATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMI 145
L Q +Q+H + G ++ V + L+ YS LDD+ F D V WS M+
Sbjct: 749 TNLTQVRQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMV 808
Query: 146 AAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRR 205
+ G F ++ + ++ T ++ AC + G ++ Y+
Sbjct: 809 GGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIV---YKF 865
Query: 206 KPRLEHYTC--VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA---C-KTHKSTDM 259
L+H+ C +VD+ G+C +++A L M + + + W ++ C ++S +
Sbjct: 866 GLDLDHFVCAALVDMYGKCREIEDARFLFDKM-XERDLVTWTVMIGGYAECGNANESLVL 924
Query: 260 AGRIAEEILGVNPQDAAPYVLLSNIHASAK 289
++ EE GV P A +++ + A AK
Sbjct: 925 FDKMREE--GVVPDKVA---MVTVVFACAK 949
>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
Length = 574
Score = 367 bits (942), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 185/444 (41%), Positives = 272/444 (61%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G LD S+L MY K G + +++ MP ++++ +IAG A+ G + +
Sbjct: 131 GLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLF 190
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ MR GF PDK+ V+++++C++L + + + +H V SLDV + +++I MY++C
Sbjct: 191 DQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKC 250
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +D S + F E +V+ WS+MI AYG+HG+G EA+ LF M N +TF+SLL
Sbjct: 251 GSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLL 310
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
YACSH GL + G++ F LM Y +P ++HYTC+VDLLGR G LD+A LI NM V+ +
Sbjct: 311 YACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKD 370
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
IW L AC+ H+ D+A + A+ +L + Q+ Y+LLSNI+A+A RW+ V++ R
Sbjct: 371 EGIWCAFLGACRIHRQVDLAEKAAKLLLSLQTQNPGHYILLSNIYANAGRWKDVAKIRNL 430
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M +R +KK PG +W+E+ N +++F GD SH RS EI L+ L+ +++ GYVPDT +
Sbjct: 431 MAKRRLKKIPGYTWIEVDNIIYRFGAGDNSHLRSNEIYEMLKSLSQKLESAGYVPDTNSV 490
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA----------EHTRGLIVMLP----FKYISEIKNR 406
+HD+D E K L HSEKLAIAF T+ L V K +S I R
Sbjct: 491 LHDVDEEVKLGILHAHSEKLAIAFGLIATPDGTPIRITKNLRVCGDCHSFCKLVSAITQR 550
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
+IIVRDA+RFHHF+ G CSCGDYW
Sbjct: 551 DIIVRDANRFHHFKEGICSCGDYW 574
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 122/250 (48%), Gaps = 2/250 (0%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
DL+ + L +M K LV + M R+ ++W +I G +NG E + +
Sbjct: 34 DLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVMIGGFVKNGDYERCFQTFRELI 93
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G +PD + VI +C + L G+ IH+ V+K G LD V S+L+ MY++CG +D
Sbjct: 94 RAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLDNFVCSTLVDMYAKCGMID 153
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
++ + F D+V + MIA Y GK E+ LF+QM + F + V V+++ AC+
Sbjct: 154 NAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRDGFVPDKVAMVTIVNACA 213
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
G K D + + R +E T ++D+ +CG +D + + M K N I W
Sbjct: 214 KLGAMNKARLVHDYVCAR-RYSLDVELGTAMIDMYAKCGSIDSSREIFDRMEQK-NVISW 271
Query: 245 KTLLSACKTH 254
++ A H
Sbjct: 272 SAMIGAYGYH 281
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 366 bits (940), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 183/449 (40%), Positives = 276/449 (61%), Gaps = 25/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE DL ++L M++ G L+ + MP R++++W T+IAG Q+G + D +
Sbjct: 538 GFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYF 597
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+M+ G +PD+ITF ++++C+ L +G+++HA + +A DV V + LISMY++C
Sbjct: 598 KMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALITEAALDCDVVVGTGLISMYTKC 657
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +DD+ F +V W+SMI Y HG+G+EA+ LF QM+Q+ + + +TFV L
Sbjct: 658 GSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGAL 717
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+H GL ++G+ F+ M K + +PR+EHY C+VDL GR G L EA I M VK +
Sbjct: 718 SACAHAGLIKEGLHHFESM-KDFNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKPD 776
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+ +W LL AC+ H ++A ++A++ L ++P D YV+LSNI+A+A W+ V++ R+
Sbjct: 777 SRLWGALLGACQVHLDVELAEKVAQKKLELDPNDDGVYVILSNIYAAAGMWKEVTKMRKV 836
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M +R V K+PG SW+E+ +VH F DK+HP+ EI L L EMK GYVPDT
Sbjct: 837 MLDRGVVKKPGQSWIEVDGRVHIFCSDDKTHPQIEEIHAELGRLHMEMKKLGYVPDTRYV 896
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPF-------------------KYIS 401
+HD++ EKE+ L HHSE+LAIA+ GL+ P K IS
Sbjct: 897 LHDVEDSEKEHALCHHSERLAIAY-----GLLKTPPLTPIVISKNLRVCGDCHTATKLIS 951
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+I R+II RD++RFHHF++G CSCGD+W
Sbjct: 952 KITKRQIIARDSNRFHHFKDGVCSCGDFW 980
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 165/287 (57%), Gaps = 7/287 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G++ DL G++L +M++K G + + KV +P R++I W ++I G A++ + + +
Sbjct: 235 GWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLF 294
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+M G +PDK+ FVS++ +C+ L QG+++HA + + G ++ V ++L+SMY++C
Sbjct: 295 QVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKC 354
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++D+++ F + +VV W++MIA + HG+ EEA F +M + E N VTF+S+L
Sbjct: 355 GSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSIL 414
Query: 181 YACSHCGLKEKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
ACS ++G + D ++K Y R+ T ++ + +CG L +A + + K
Sbjct: 415 GACSRPSALKQGRQIHDRIIKAGYITDDRVR--TALLSMYAKCGSLMDARNVFERIS-KQ 471
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNI 284
N + W +++A H+ D A + +L G+ P D++ + + N+
Sbjct: 472 NVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKP-DSSTFTSILNV 517
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 140/260 (53%), Gaps = 2/260 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + ++ G++L MY K GS+ + +V L+ RNV++W +IAG AQ+G E+ +
Sbjct: 336 GLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFF 395
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
N M G P+++TF+S++ +CS + L QG+QIH ++KAG D V ++L+SMY++C
Sbjct: 396 NKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKC 455
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L D+ F +VV W++MI AY H K + A+ F+ + ++ + + TF S+L
Sbjct: 456 GSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSIL 515
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
C E G ++ ++ + + L +V + CG L A L +MP + +
Sbjct: 516 NVCKSPDALELG-KWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPER-D 573
Query: 241 AIIWKTLLSACKTHKSTDMA 260
+ W T+++ H A
Sbjct: 574 LVSWNTIIAGFVQHGENQFA 593
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 140/267 (52%), Gaps = 8/267 (2%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ + L MY K G+ +++ MP ++V +W L+ G Q+ E+ + M
Sbjct: 138 DIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMV 197
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G +PDK TFV ++++C++ + +G ++ + ++ AG D+ V ++LI+M+ +CG +D
Sbjct: 198 QDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVD 257
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D++K F D++ W+SMI H + ++A NLF+ ME++ + + V FVSLL AC+
Sbjct: 258 DALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACN 317
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H E+G M K+ + T ++ + +CG +++A + N+ N + W
Sbjct: 318 HPEALEQGKRVHARM-KEVGLDTEIYVGTALLSMYTKCGSMEDALEVF-NLVKGRNVVSW 375
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVN 271
+++ H GR+ E L N
Sbjct: 376 TAMIAGFAQH------GRMEEAFLFFN 396
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 160/313 (51%), Gaps = 13/313 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ D ++L MY K GSL++ V + +NV+AW +I Q+ ++ + +
Sbjct: 437 GYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATF 496
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ G +PD TF S+++ C L G+ + + +++AG D+ + ++L+SM+ C
Sbjct: 497 QALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNC 556
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L ++ F + D+V W+++IA + HG+ + A + F+ M++ + + +TF LL
Sbjct: 557 GDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLL 616
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+ +G L+ + + T ++ + +CG +D+A + N+P K N
Sbjct: 617 NACASPEALTEGRRLHALITEAALDCDVVVG-TGLISMYTKCGSIDDAHLVFHNLP-KKN 674
Query: 241 AIIWKTLLSACKTH----KSTDMAGRIAEEILGVNPQDAAPYV--LLSNIHASAKRWQGV 294
W ++++ H ++ ++ ++ +E GV P D +V L + HA + +G+
Sbjct: 675 VYSWTSMITGYAQHGRGKEALELFCQMQQE--GVKP-DWITFVGALSACAHAGLIK-EGL 730
Query: 295 SEFREAMRERNVK 307
F E+M++ N++
Sbjct: 731 HHF-ESMKDFNIE 742
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 106/210 (50%), Gaps = 4/210 (1%)
Query: 74 TFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLEC 133
T+ S++ C + LG G++IH + + D+ + + LISMY++CG + + + F E
Sbjct: 106 TYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEM 165
Query: 134 EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGM 193
DV W+ ++ Y H + EEA L EQM Q + + TFV +L AC+ +KG
Sbjct: 166 PDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGG 225
Query: 194 EFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKT 253
E F L++ L T ++++ +CG +D+A + N+P + + I W ++++
Sbjct: 226 ELFSLILNA-GWDTDLFVGTALINMHIKCGGVDDALKVFNNLP-RRDLITWTSMITGLAR 283
Query: 254 HKSTDMAGRIAE--EILGVNPQDAAPYVLL 281
H+ A + + E GV P A LL
Sbjct: 284 HRQFKQACNLFQVMEEEGVQPDKVAFVSLL 313
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 182/444 (40%), Positives = 276/444 (62%), Gaps = 15/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+++++ GSSL MY + + E + + + +NV++W LIAG A+ G E V+ +
Sbjct: 236 GYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLF 295
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M GF P T+ SV ++C+ +L QG+ +HA V+K+G + ++LI MY++
Sbjct: 296 LQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKS 355
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + D+ K F D+V W+S+I+ Y HG G EA+ LFEQM + + + N++TF+S+L
Sbjct: 356 GSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVL 415
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL ++G +F+LM KK++ + ++ H+ VVDLLGR G L+EA I MP+K
Sbjct: 416 TACSHSGLLDEGQYYFELM-KKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPT 474
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A +W LL +C+ HK+ D+ AE+I ++P D+ P+VLLSNI+ASA R ++ R+
Sbjct: 475 AAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKM 534
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+E VKKEP SW+EI+N+VH F D SHP EI E+++ ++K GYVPDT
Sbjct: 535 MKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHV 594
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNR 406
+ M+ +++E L++HSEKLA+AFA + GL + + FK+ S + R
Sbjct: 595 LFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGR 654
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EIIVRD +RFHHF +G CSC DYW
Sbjct: 655 EIIVRDTNRFHHFLHGMCSCRDYW 678
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 146/272 (53%), Gaps = 2/272 (0%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
FE DLV + + +MY K GSL E + + MP +++++W LI+G +Q+G A + L +
Sbjct: 136 FEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFP 195
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M +GF+P++ T S++ + + G+Q+HA +K G ++V V SSL+ MY+R
Sbjct: 196 KMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWA 255
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+ ++ F +VV W+++IA + G+GE + LF QM ++ FE T+ S+
Sbjct: 256 HMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFT 315
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
AC+ G E+G ++ V K +P ++D+ + G + +A + R + VK +
Sbjct: 316 ACASSGSLEQG-KWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRL-VKQDI 373
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQ 273
+ W +++S H A ++ E++L Q
Sbjct: 374 VSWNSIISGYAQHGLGAEALQLFEQMLKAKVQ 405
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 95/190 (50%), Gaps = 2/190 (1%)
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+L+ P++ + +++ C+ L L QG+ IHA + + D+ +++ +++MY++C
Sbjct: 94 DLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKC 153
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L+++ F + D+V W+ +I+ Y G+ EA+ LF +M F+ N+ T SLL
Sbjct: 154 GSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLL 213
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
A G + + KY + + ++D+ R ++ EA + ++ K N
Sbjct: 214 KASGTGPSDHHGRQLHAFSL-KYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAK-N 271
Query: 241 AIIWKTLLSA 250
+ W L++
Sbjct: 272 VVSWNALIAG 281
>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Glycine max]
Length = 782
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 179/446 (40%), Positives = 270/446 (60%), Gaps = 26/446 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
DLV+ +++ + + + E + R MP+R+++ W +I+G AQNG E+ L +N M+
Sbjct: 343 DLVSWNAILSGCVNARRIEEANSIFREMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMK 402
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+ G P + I+SCS L +L GQQ+H+++++ G + V ++LI+MYSRCG ++
Sbjct: 403 LEGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQIIQLGHDSSLSVGNALITMYSRCGLVE 462
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ FL Y D V W++MIAA HG G +AI L+E+M +++ + +TF+++L ACS
Sbjct: 463 AADTVFLTMPYVDSVSWNAMIAALAQHGHGVQAIQLYEKMLKEDILPDRITFLTILSACS 522
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL ++G +FD M Y P +HY+ ++DLL R G EA + +MP + A IW
Sbjct: 523 HAGLVKEGRHYFDTMRVCYGITPEEDHYSRLIDLLCRAGMFSEAKNVTESMPFEPGAPIW 582
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
+ LL+ C H + ++ + A+ +L + PQ Y+ LSN++A+ +W V+ R+ MRER
Sbjct: 583 EALLAGCWIHGNMELGIQAADRLLELMPQQDGTYISLSNMYAALGQWDEVARVRKLMRER 642
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
VKKEPG SW+E++N VH F + D HP + YLE+L EM+ GYVPDT +HDM
Sbjct: 643 GVKKEPGCSWIEVENMVHVFLVDDAVHPEVHAVYRYLEQLVHEMRKLGYVPDTKFVLHDM 702
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP--------------------FKYISEIK 404
+SE+KEY L HSEKLA+ + I+ LP FKYIS++
Sbjct: 703 ESEQKEYALSTHSEKLAVVYG------IMKLPLGATIRVFKNLRICGDCHNAFKYISKVV 756
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
+REIIVRD RFHHFRNG+CSC +YW
Sbjct: 757 DREIIVRDRKRFHHFRNGECSCSNYW 782
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 132/299 (44%), Gaps = 37/299 (12%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D A +++ Y+++ LV +++ M +AW +I+G G E+ D M
Sbjct: 207 DEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRGFYEEAFDLLRRMH 266
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHA----EVVKAGASLDVGVISSLISMYSRC 120
+G + D+ T+ SVIS+ S G+Q+HA VV+ + V ++LI++Y+RC
Sbjct: 267 SLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFVLSVNNALITLYTRC 326
Query: 121 GCLDDSVKTFLECEYSDVVLWSS-------------------------------MIAAYG 149
G L ++ + F + D+V W++ MI+
Sbjct: 327 GKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVRSLLTWTVMISGLA 386
Query: 150 FHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRL 209
+G GEE + LF QM+ + E D + + +CS G + G + ++ + L
Sbjct: 387 QNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQII-QLGHDSSL 445
Query: 210 EHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL 268
++ + RCG ++ A + MP +++ W +++A H A ++ E++L
Sbjct: 446 SVGNALITMYSRCGLVEAADTVFLTMPY-VDSVSWNAMIAALAQHGHGVQAIQLYEKML 503
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 133/311 (42%), Gaps = 49/311 (15%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMP--IRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
D+VA +++ Y +G++ ++ P IR+ +++ +I + + L +
Sbjct: 61 DIVAATTMLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQ 120
Query: 63 MRMVGFRPDKITFVSVISSCSELAT-LGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M+ +GF PD TF SV+ + S +A QQ+H EV K GA V+++L+S Y C
Sbjct: 121 MKRLGFVPDPFTFSSVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCA 180
Query: 122 -------CL--------------------------------DDSV--KTFLECEYSDV-V 139
C+ DD V + LE + V
Sbjct: 181 SSPLVNSCVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAV 240
Query: 140 LWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLM 199
W++MI+ Y G EEA +L +M + ++ T+ S++ A S+ GL G + +
Sbjct: 241 AWNAMISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYV 300
Query: 200 VKKYRRKPR---LEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKS 256
++ + L ++ L RCG L EA + MPVK + + W +LS C +
Sbjct: 301 LRTVVQPSGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVK-DLVSWNAILSGCVNARR 359
Query: 257 TDMAGRIAEEI 267
+ A I E+
Sbjct: 360 IEEANSIFREM 370
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 83/185 (44%), Gaps = 11/185 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + L G++L MY + G + + V MP + ++W +IA AQ+G + Y
Sbjct: 440 GHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHGHGVQAIQLY 499
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEV-VKAGASLDVGVISSLISMYSR 119
M PD+ITF++++S+CS + +G+ + V G + + S LI + R
Sbjct: 500 EKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPEEDHYSRLIDLLCR 559
Query: 120 CGCLDDSVKTFLECEYSD-VVLWSSMIAAYGFHGKGEEAIN----LFEQMEQKEFEANDV 174
G ++ + +W +++A HG E I L E M Q+ D
Sbjct: 560 AGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHGNMELGIQAADRLLELMPQQ-----DG 614
Query: 175 TFVSL 179
T++SL
Sbjct: 615 TYISL 619
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 192/451 (42%), Positives = 280/451 (62%), Gaps = 29/451 (6%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
E+D+V G++L +MY K GS+ V +P R+VI+W TLI G AQNGLA + +D YN
Sbjct: 381 LEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVISWNTLITGYAQNGLASEAIDAYN 440
Query: 62 LM---RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
+M R + P++ T+VS++ + S + L QG +IH ++K LDV V + LI MY
Sbjct: 441 MMEEGRTI--VPNQGTWVSILPAYSHVGALQQGMKIHGRLIKNCLFLDVFVATCLIDMYG 498
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+CG L+D++ F E V W+++I++ G HG GE+A+ LF+ M +A+ +TFVS
Sbjct: 499 KCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKALQLFKDMRADGVKADHITFVS 558
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
LL ACSH GL ++ FD M K+YR KP L+HY C+VDL GR GYL++A L+ NMP++
Sbjct: 559 LLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYGCMVDLFGRAGYLEKAYNLVSNMPIQ 618
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
A+A IW TLL+AC+ H + ++ ++ +L V+ ++ YVLLSNI+A+ +W+G + R
Sbjct: 619 ADASIWGTLLAACRIHGNAELGTFASDRLLEVDSENVGYYVLLSNIYANVGKWEGAVKVR 678
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
R+R ++K PG S + + + V F G++SHP+ EI L L ++MK GYVPD
Sbjct: 679 SLARDRGLRKTPGWSSVVVGSVVEVFYAGNQSHPQCAEIYEELRVLNAKMKSLGYVPDYS 738
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKY 399
+ D++ +EKE L HSE+LAI F G+I P KY
Sbjct: 739 FVLQDVEEDEKEEILTSHSERLAIVF-----GIISTPPKSPIRIFKNLRVCGDCHNATKY 793
Query: 400 ISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
IS+I REIIVRD++RFHHF++G CSCGDYW
Sbjct: 794 ISKITEREIIVRDSNRFHHFKDGICSCGDYW 824
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 126/250 (50%), Gaps = 1/250 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE D+ +SL H+Y + G++ KV MP+R+V +W +I+G QNG + L
Sbjct: 177 GFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVL 236
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M+ + D +T S++ C++ + G +H V+K G DV V ++LI+MYS+
Sbjct: 237 DRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKF 296
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L D+ + F E D+V W+S+IAAY + A+ F++M + +T VSL
Sbjct: 297 GRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLA 356
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
+ G +V+ + + +V++ + G +D A A+ +P + +
Sbjct: 357 SIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSR-D 415
Query: 241 AIIWKTLLSA 250
I W TL++
Sbjct: 416 VISWNTLITG 425
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 143/283 (50%), Gaps = 9/283 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN-LM 63
D+V + L +Y G L + + +N+ +W ++++ + G D +D L+
Sbjct: 82 DVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMVSAYVRRGRYRDSMDCVTELL 141
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
+ G RPD TF V+ +C LA G+++H V+K G DV V +SLI +YSR G +
Sbjct: 142 SLSGVRPDFYTFPPVLKACLSLA---DGEKMHCWVLKMGFEHDVYVAASLIHLYSRFGAV 198
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
+ + K F++ DV W++MI+ + +G EA+ + ++M+ +E + + VT S+L C
Sbjct: 199 EVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRMKTEEVKMDTVTVSSMLPIC 258
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
+ G+ L V K+ + + ++++ + G L +A + M V+ + +
Sbjct: 259 AQSNDVVGGV-LVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVR-DLVS 316
Query: 244 WKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNI 284
W ++++A + + A +E+L G+ P D V L++I
Sbjct: 317 WNSIIAAYEQNDDPVTALGFFKEMLFVGMRP-DLLTVVSLASI 358
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 93/202 (46%), Gaps = 25/202 (12%)
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
F V SC+ + +Q+HA ++ G + DV +++ L+++Y+ G L S TF +
Sbjct: 54 FNLVFRSCTNINV---AKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQ 110
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAIN-LFEQMEQKEFEANDVTFVSLLYAC--------SH 185
++ W+SM++AY G+ ++++ + E + + TF +L AC H
Sbjct: 111 RKNIFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLADGEKMH 170
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
C + + G E D+ V ++ L R G ++ A + +MPV+ + W
Sbjct: 171 CWVLKMGFE-HDVYVA-----------ASLIHLYSRFGAVEVAHKVFVDMPVR-DVGSWN 217
Query: 246 TLLSACKTHKSTDMAGRIAEEI 267
++S + + A R+ + +
Sbjct: 218 AMISGFCQNGNVAEALRVLDRM 239
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 365 bits (936), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 178/449 (39%), Positives = 279/449 (62%), Gaps = 24/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D ++L +MY GS+ + +V M R+++A+ +I G A + L ++ L +
Sbjct: 577 GLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLF 636
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ ++ G +PDK+T+++++++C+ +L ++IH+ V+K G D + ++L+S Y++C
Sbjct: 637 DRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKC 696
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G D++ F + +V+ W+++I HG+G++ + LFE+M+ + + + VTFVSLL
Sbjct: 697 GSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLL 756
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL E+G +F M + + P +EHY C+VDLLGR G LDE ALI+ MP +AN
Sbjct: 757 SACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQAN 816
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
IW LL AC+ H + +A R AE L ++P +AA YV LS+++A+A W ++ R+
Sbjct: 817 TRIWGALLGACRIHGNVPVAERAAESSLKLDPDNAAVYVALSHMYAAAGMWDSAAKLRKL 876
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M +R V KEPG SW+E+ +++H F D+SHP S +I L++LT MK+ GYVPDT +
Sbjct: 877 MEQRGVTKEPGRSWIEVGDKLHYFVAEDRSHPESEKIYAELDKLTHAMKMEGYVPDTRSV 936
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
MHD+D EKE + HHSE+LAIA+ GLI LP K+I+
Sbjct: 937 MHDVDEGEKENAVCHHSERLAIAY-----GLISTLPGTPIRIFKNLRVCPDCHTATKFIT 991
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+I +REI+ RD +RFHHF++G CSCGDYW
Sbjct: 992 KIVDREIVARDVNRFHHFKDGVCSCGDYW 1020
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 145/255 (56%), Gaps = 4/255 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D+ ++L MY + GS+ + + M +++I+W +I G A++GL + L +
Sbjct: 476 GFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVF 535
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G +P+++T+ S++++CS A L G++IH +V++AG + D V ++L++MYS C
Sbjct: 536 QDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMC 595
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + D+ + F D+V +++MI Y H G+EA+ LF++++++ + + VT++++L
Sbjct: 596 GSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINML 655
Query: 181 YACSHCGLKEKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
AC++ G E E L++K Y L + +V +CG +A + M +K
Sbjct: 656 NACANSGSLEWAKEIHSLVLKDGYLSDTSLGN--ALVSTYAKCGSFSDALLVFDKM-MKR 712
Query: 240 NAIIWKTLLSACKTH 254
N I W ++ C H
Sbjct: 713 NVISWNAIIGGCAQH 727
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 152/292 (52%), Gaps = 9/292 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E DL G++L MY K GS + +V + R++IAW T+I G A+ G E+ + Y
Sbjct: 375 GHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIY 434
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M+ G P+KIT+V ++++C L G++IH+ VVK G D+ V ++LISMY+RC
Sbjct: 435 HQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARC 494
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + D+ F + D++ W++MI G G EA+ +F+ M+Q + N VT+ S+L
Sbjct: 495 GSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSIL 554
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACS + G +++ T +V++ CG + +A + M + +
Sbjct: 555 NACSSPAALDWGRRIHQQVIEAGLATDAHVANT-LVNMYSMCGSVKDARQVFDRM-TQRD 612
Query: 241 AIIWKTLLSACKTH----KSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASA 288
+ + ++ H ++ + R+ EE G+ P D Y+ + N A++
Sbjct: 613 IVAYNAMIGGYAAHNLGKEALKLFDRLQEE--GLKP-DKVTYINMLNACANS 661
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 162/342 (47%), Gaps = 44/342 (12%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
D+ + + +MY K GS+ E +V M ++V++W +I G A G +E + + M
Sbjct: 277 FDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKM 336
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
+ G P++IT+++V+++ S A L G+ +H+ ++ AG D+ V ++L+ MY++CG
Sbjct: 337 QQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSY 396
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
D + F + D++ W++MI G EEA ++ QM+++ N +T+V LL AC
Sbjct: 397 KDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNAC 456
Query: 184 -----------------------------------SHCGLKEKGMEFFDLMVKKYRRKPR 208
+ CG + F+ MV+K
Sbjct: 457 VNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRK-----D 511
Query: 209 LEHYTCVVDLLGRCGYLDEAAALIRNMP---VKANAIIWKTLLSACKTHKSTDMAGRIAE 265
+ +T ++ L + G EA A+ ++M +K N + + ++L+AC + + D RI +
Sbjct: 512 IISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQ 571
Query: 266 EILGVN-PQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNV 306
+++ DA L N+++ + + + M +R++
Sbjct: 572 QVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDI 613
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 142/294 (48%), Gaps = 9/294 (3%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLM--PIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
LD ++L +MY++ GS+ E +V + R V +W ++ G Q G E+ L
Sbjct: 174 LDQYTVNALINMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLR 233
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M+ G + T + ++SSC + L G++IH E +KA DV V + +++MY++CG
Sbjct: 234 EMQQHGLALGRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCG 293
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+ ++ + F + E VV W+ +I Y G E A +F++M+Q+ N +T++++L
Sbjct: 294 SIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLN 353
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
A S + G ++ + L T +V + +CG + + + V +
Sbjct: 354 AFSGPAALKWGKTVHSHILNA-GHESDLAVGTALVKMYAKCGSYKDCRQVFEKL-VNRDL 411
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSN--IHASAKRW 291
I W T++ + + A I ++ G+ P + YV+L N ++ +A W
Sbjct: 412 IAWNTMIGGLAEGGNWEEASEIYHQMQREGMMP-NKITYVILLNACVNPTALHW 464
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 107/221 (48%), Gaps = 6/221 (2%)
Query: 57 LDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISM 116
+D ++ G R + ++ ++ C E+ L G+++H +++ LD +++LI+M
Sbjct: 126 MDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINM 185
Query: 117 YSRCGCLDDSVKTFLECEYSDVVL--WSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDV 174
Y +CG ++++ + + + +++ + W++M+ Y +G EEA+ L +M+Q
Sbjct: 186 YIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRA 245
Query: 175 TFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRN 234
T + LL +C E G E + K R + C++++ +CG + EA +
Sbjct: 246 TTMRLLSSCKSPSALECGREIH-VEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDK 304
Query: 235 MPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQ 273
M K+ + W ++ +++A I +++ GV P
Sbjct: 305 METKS-VVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPN 344
>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like, partial [Vitis vinifera]
Length = 599
Score = 364 bits (935), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 188/444 (42%), Positives = 275/444 (61%), Gaps = 24/444 (5%)
Query: 6 LVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRM 65
+VA +++ +MK G + EK MP++N++ W +IAG +N AE+ L + M
Sbjct: 161 VVAWTAMITGFMKFGKIELAEKYFEEMPMKNLVTWNAMIAGYIENCQAENGLKLFKRMVE 220
Query: 66 VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD 125
GFRP+ + SV+ CS L+ L G+Q+H + K+ S ++ +SL+SMY +CG L+D
Sbjct: 221 SGFRPNPSSLSSVLLGCSNLSALKLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLED 280
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
+ K FL DVV W++MI+ Y HG GE+A+ LF++M + + + +TFV++L AC+H
Sbjct: 281 AWKLFLVMPQKDVVTWNAMISGYAQHGAGEKALYLFDKMRDEGMKPDWITFVAVLSACNH 340
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
G + G+E+F+ MV+ Y + + +HYTCVVDLLGR G L EA LI+ MP K ++ I+
Sbjct: 341 AGFVDLGIEYFNSMVRDYGVEAKPDHYTCVVDLLGRGGKLVEAVDLIKKMPFKPHSAIFG 400
Query: 246 TLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERN 305
TLL AC+ HK+ ++A A+ +L ++P+ AA YV L+N++A+ RW V+ R +M++
Sbjct: 401 TLLGACRIHKNLELAEFAAKNLLNLDPESAAGYVQLANVYAAMNRWDHVAMVRRSMKDNK 460
Query: 306 VKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMD 365
V K PG SW+E+K+ VH+F GD+ HP I L EL +M+L GYVPD +HD+
Sbjct: 461 VIKTPGYSWIEVKSVVHEFRSGDRIHPELAFIHEKLNELERKMRLAGYVPDLEYALHDVG 520
Query: 366 SEEKEYNLKHHSEKLAIAFAEHTRGLIVM---LPF----------------KYISEIKNR 406
E+K+ L HSEKLAIA+ GLI M P KYIS I+ R
Sbjct: 521 EEQKKQILLRHSEKLAIAY-----GLIRMPLGTPIRVFKNLRVCGDCHSATKYISAIEGR 575
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
IIVRD +RFHHFR G+CSCGDYW
Sbjct: 576 VIIVRDTTRFHHFRQGECSCGDYW 599
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 145/313 (46%), Gaps = 18/313 (5%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E D+ + + + Y+ + + MP+++ +W T+I+G +QNG+ +DQ
Sbjct: 65 EPDIFSYNIMLACYLHNADVESARLFFDQMPVKDTASWNTMISGFSQNGM----MDQARE 120
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
+ +V + +++ ++IS E L +Q+ + V +++I+ + + G
Sbjct: 121 LFLVMPVRNSVSWNAMISGYVESGDLDLAKQL----FEVAPVRSVVAWTAMITGFMKFGK 176
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
++ + K F E ++V W++MIA Y + + E + LF++M + F N + S+L
Sbjct: 177 IELAEKYFEEMPMKNLVTWNAMIAGYIENCQAENGLKLFKRMVESGFRPNPSSLSSVLLG 236
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLG---RCGYLDEAAALIRNMPVKA 239
CS+ + G + L+ K P + T LL +CG L++A L MP K
Sbjct: 237 CSNLSALKLGKQVHQLICK----SPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQK- 291
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEF 297
+ + W ++S H + + A + +++ G+ P +LS + + G+ F
Sbjct: 292 DVVTWNAMISGYAQHGAGEKALYLFDKMRDEGMKPDWITFVAVLSACNHAGFVDLGIEYF 351
Query: 298 REAMRERNVKKEP 310
+R+ V+ +P
Sbjct: 352 NSMVRDYGVEAKP 364
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 33/179 (18%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
++ AG+SL MY K G L + K+ +MP ++V+ W +I+G AQ+G E L ++ MR
Sbjct: 261 NITAGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMISGYAQHGAGEKALYLFDKMR 320
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G +PD ITFV+V+S+C+ HA V G + +S++ Y D
Sbjct: 321 DEGMKPDWITFVAVLSACN-----------HAGFVDLG----IEYFNSMVRDYGVEAKPD 365
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
++ ++ G GK EA++L ++M F+ + F +LL AC
Sbjct: 366 H---------------YTCVVDLLGRGGKLVEAVDLIKKM---PFKPHSAIFGTLLGAC 406
>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 591
Score = 364 bits (934), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 182/444 (40%), Positives = 272/444 (61%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE + +SL H+Y G KV LM R+++AW ++I G A NG + L +
Sbjct: 148 GFESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFALNGRPNEALTLF 207
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M + G PD T VS++S+ +EL L G+++H ++K G S + V +SL+ +Y++C
Sbjct: 208 REMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTNSLLDLYAKC 267
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + ++ + F E + V W+S+I +G GEEA+ LF++ME + +++TFV +L
Sbjct: 268 GAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVPSEITFVGVL 327
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
YACSHCG+ ++G E+F M ++ PR+EHY C+VDLL R G + +A I+NMPV+ N
Sbjct: 328 YACSHCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPN 387
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A+IW+TLL AC H + +L + P+ + YVLLSN++AS +RW V R +
Sbjct: 388 AVIWRTLLGACTIHGHLGLGEIARSHLLNLEPKHSGDYVLLSNLYASERRWSDVQVIRRS 447
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M + VKK PG S +E+ N+V++FTMGD+SHP+S ++ LE++T +KL GYVP T
Sbjct: 448 MLKDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYALLEKITELLKLEGYVPHTANV 507
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAF----AEHTRGLIVM----------LPFKYISEIKNR 406
+ D++ EEKE L +HSEK+AIAF + VM + K I++I +R
Sbjct: 508 LADIEEEEKEQALSYHSEKVAIAFMLLNTPPGTPIRVMKNLRVCADCHMAIKLIAKIYDR 567
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EI++RD SRFHHFR G CSC DYW
Sbjct: 568 EIVIRDRSRFHHFRGGSCSCKDYW 591
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 106/214 (49%), Gaps = 4/214 (1%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
NV W T+I G A++ Y M + PD T+ ++ + S+ + +G+ IH
Sbjct: 82 NVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLNVREGEAIH 141
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGE 155
+ ++ G V V +SL+ +Y+ CG + + K F + D+V W+SMI + +G+
Sbjct: 142 SVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFALNGRPN 201
Query: 156 EAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYT-C 214
EA+ LF +M + E + T VSLL A + G E G ++K K H T
Sbjct: 202 EALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKN--SHVTNS 259
Query: 215 VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
++DL +CG + EA + M + NA+ W +L+
Sbjct: 260 LLDLYAKCGAIREAQRVFSEMSER-NAVSWTSLI 292
>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 363 bits (933), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 183/444 (41%), Positives = 276/444 (62%), Gaps = 16/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+++++ GSSL MY + + E + + + +NV++W LIAG A+ G E V+ +
Sbjct: 236 GYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLF 295
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M GF P T+ SV++ C+ +L QG+ +HA V+K+G + ++LI MY++
Sbjct: 296 XQMLRQGFEPTHFTYSSVLA-CASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKS 354
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + D+ K F D+V W+S+I+ Y HG G EA+ LFEQM + + + N++TF+S+L
Sbjct: 355 GSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVL 414
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL ++G +F+LM KK++ + ++ H+ VVDLLGR G L+EA I MP+K
Sbjct: 415 TACSHSGLLDEGQYYFELM-KKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPT 473
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A +W LL AC+ HK+ D+ AE+I ++P D+ P+VLLSNI+ASA R ++ R+
Sbjct: 474 AAVWGALLGACRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKM 533
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+E VKKEP SW+EI+N+VH F D SHP EI E+++ ++K GYVPDT
Sbjct: 534 MKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHV 593
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNR 406
+ M+ +++E L++HSEKLA+AFA + GL + + FK+ S + R
Sbjct: 594 LFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGR 653
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EIIVRD +RFHHF +G CSC DYW
Sbjct: 654 EIIVRDTNRFHHFLHGMCSCRDYW 677
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 147/272 (54%), Gaps = 3/272 (1%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
FE DLV + + +MY K GSL E + + MP +++++W LI+G +Q+G A + L +
Sbjct: 136 FEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFP 195
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M +GF+P++ T S++ + + G+Q+HA +K G ++V V SSL+ MY+R
Sbjct: 196 KMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWA 255
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+ ++ F +VV W+++IA + G+GE + LF QM ++ FE T+ S+L
Sbjct: 256 HMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL- 314
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
AC+ G E+G ++ V K +P ++D+ + G + +A + R + VK +
Sbjct: 315 ACASSGSLEQG-KWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRL-VKQDI 372
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQ 273
+ W +++S H A ++ E++L Q
Sbjct: 373 VSWNSIISGYAQHGLGAEALQLFEQMLKAKVQ 404
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 95/190 (50%), Gaps = 2/190 (1%)
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+L+ P++ + +++ C+ L L QG+ IHA + + D+ +++ +++MY++C
Sbjct: 94 DLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKC 153
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L+++ F + D+V W+ +I+ Y G+ EA+ LF +M F+ N+ T SLL
Sbjct: 154 GSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLL 213
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
A G + + KY + + ++D+ R ++ EA + ++ K N
Sbjct: 214 KASGTGPSDHHGRQLHAFSL-KYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAK-N 271
Query: 241 AIIWKTLLSA 250
+ W L++
Sbjct: 272 VVSWNALIAG 281
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 363 bits (933), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 175/434 (40%), Positives = 274/434 (63%), Gaps = 24/434 (5%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y ++G L E + +MP ++ ++W ++A +Q G +E+ L + M G ++ F
Sbjct: 396 YAQAGMLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVNRSAF 455
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
V+S+C+++A L G Q+H+ ++KAG + V ++L++MY +CG ++++ F E E
Sbjct: 456 ACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEE 515
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
DVV W++MIA Y HG G+EA+ +F+ M + + +D+T V +L ACSH GL EKG+ +
Sbjct: 516 RDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGISY 575
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK 255
F M + + + EHYTC++DLLGR G LDEA L+++MP + ++ +W LL A + H+
Sbjct: 576 FYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALLGASRIHR 635
Query: 256 STDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWL 315
++++ AE+I + P++A YVLLSNI+AS+ +W+ V + R M ER VKK PG SW+
Sbjct: 636 NSELGRNAAEKIFELEPENAGMYVLLSNIYASSGKWRDVDKMRHIMHERGVKKVPGFSWI 695
Query: 316 EIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKH 375
E++N+VH F++GD HP +I +LE+L MK GYV T +HD++ EEKE+ LK+
Sbjct: 696 EVQNKVHTFSVGDSVHPEREDIYAFLEDLDIRMKKAGYVSATDMVLHDVEEEEKEHMLKY 755
Query: 376 HSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREIIVRDASRF 416
HSEKLA+A+ G++ + P FK IS I+ R II+RD++RF
Sbjct: 756 HSEKLAVAY-----GILKIPPGRPIRVIKNLRVCRDCHTAFKCISAIEGRLIILRDSNRF 810
Query: 417 HHFRNGKCSCGDYW 430
HHFR+G CSCGDYW
Sbjct: 811 HHFRDGSCSCGDYW 824
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 141/317 (44%), Gaps = 26/317 (8%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
+ D+V+ +++ Y + G + E ++ + PIR+V W +++G AQNG+ E+ ++
Sbjct: 290 QRDVVSWNTMVSGYARRGDMAEARRLFDVAPIRDVFTWTAIVSGYAQNGMLEEAKRVFDA 349
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIH--AEVVKAGASLDVGVISSLISMYSRC 120
M PDK + +S + +A Q + + E+ A +V +++++ Y++
Sbjct: 350 M------PDK----NAVSWNAMMAAYVQRRMMEEAKELFDAMPCRNVASWNTMLTGYAQA 399
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G LD++ F D V W++M+AAY G EE + LF++M + N F +L
Sbjct: 400 GMLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVNRSAFACVL 459
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVD-----LLGRCGYLDEAAALIRNM 235
C+ E GM+ ++K C V + +CG ++EA + M
Sbjct: 460 STCADIAALECGMQLHSRLIKAG------YGVGCFVGNALLAMYFKCGSMEEAHSAFEEM 513
Query: 236 PVKANAIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLSNIHASAKRWQG 293
+ + + W T+++ H A + + + P D +L+ S +G
Sbjct: 514 EER-DVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKG 572
Query: 294 VSEFREAMRERNVKKEP 310
+S F R+ V +P
Sbjct: 573 ISYFYSMHRDFGVATKP 589
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 25/198 (12%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ + G++L MY K GS+ E M R+V++W T+IAG A++G ++ L+ +
Sbjct: 482 GYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEALEVF 541
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASL------DVGVISS-- 112
+ MR +PD IT V V+++CS H+ +V+ G S D GV +
Sbjct: 542 DTMRKTSTKPDDITLVGVLAACS-----------HSGLVEKGISYFYSMHRDFGVATKPE 590
Query: 113 ----LISMYSRCGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQK 167
+I + R G LD++V + + D +W +++ A H E N E++ +
Sbjct: 591 HYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALLGASRIHRNSELGRNAAEKIFEL 650
Query: 168 EFE-ANDVTFVSLLYACS 184
E E A +S +YA S
Sbjct: 651 EPENAGMYVLLSNIYASS 668
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 118/262 (45%), Gaps = 41/262 (15%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
+M++G + + E++ MP R+ + T++AG A NG L + + RPD ++
Sbjct: 117 HMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSIP----RPDSFSY 172
Query: 76 VSVISSCSELATLGQGQQIHAEV-VKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
+++ + ++L + + E+ VK S +V +IS ++ G + + F
Sbjct: 173 NTLLHALGVSSSLADVRALFDEMPVKDSVSYNV-----MISSHANHGLVSLARHYFDLAP 227
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGME 194
D V W+ M+AAY +G+ +EA LF+ + E++A +++ +L+ E+ +
Sbjct: 228 EKDAVSWNGMLAAYVRNGRIQEARELFDS--RTEWDA--ISWNALMAGYVQRSQIEEAQK 283
Query: 195 FF-----------DLMVKKYRRKPRLEH---------------YTCVVDLLGRCGYLDEA 228
F + MV Y R+ + +T +V + G L+EA
Sbjct: 284 MFNKMPQRDVVSWNTMVSGYARRGDMAEARRLFDVAPIRDVFTWTAIVSGYAQNGMLEEA 343
Query: 229 AALIRNMPVKANAIIWKTLLSA 250
+ MP K NA+ W +++A
Sbjct: 344 KRVFDAMPDK-NAVSWNAMMAA 364
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 116/274 (42%), Gaps = 43/274 (15%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D + ++L H S SL + + MP+++ +++ +I+ A +GL ++L
Sbjct: 168 DSFSYNTLLHALGVSSSLADVRALFDEMPVKDSVSYNVMISSHANHGLVSLARHYFDLA- 226
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHA--EVVKAGASLDVGVISSLISMYSRCGC 122
P+K +S LA + +I E+ + D ++L++ Y +
Sbjct: 227 -----PEK----DAVSWNGMLAAYVRNGRIQEARELFDSRTEWDAISWNALMAGYVQRSQ 277
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
++++ K F + DVV W++M++ Y G EA LF+ ++ T+ +++
Sbjct: 278 IEEAQKMFNKMPQRDVVSWNTMVSGYARRGDMAEARRLFDVAPIRDV----FTWTAIVSG 333
Query: 183 CSHCGLKEKGMEFFDLMVKK-----------YRRKPRLEHYTCVVDLL------------ 219
+ G+ E+ FD M K Y ++ +E + D +
Sbjct: 334 YAQNGMLEEAKRVFDAMPDKNAVSWNAMMAAYVQRRMMEEAKELFDAMPCRNVASWNTML 393
Query: 220 ---GRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+ G LDEA A+ MP K +A+ W +L+A
Sbjct: 394 TGYAQAGMLDEARAIFGMMPQK-DAVSWAAMLAA 426
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 363 bits (933), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 184/435 (42%), Positives = 264/435 (60%), Gaps = 26/435 (5%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y ++G + + MP R+ I+W +IAG AQ+G E+ L + M+ G R ++ TF
Sbjct: 338 YAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTF 397
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
S +S+C+E+A L G+Q+H VVKAG V ++L+ MY +CG +DD+ F E
Sbjct: 398 TSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEE 457
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
+VV W++MIA Y HG G+EA+ LFE M++ +DVT V +L ACSH GL +KG E+
Sbjct: 458 KEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEY 517
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK 255
F M + Y +HYTC++DLLGR G LD+A L++NMP + +A W LL A + H
Sbjct: 518 FYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHG 577
Query: 256 STDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWL 315
+T++ + A+ I + P ++ YVLLSN++A++ RW V R MR+R VKK PG SW+
Sbjct: 578 NTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWV 637
Query: 316 EIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKH 375
E++N++H FT+GD HP I +LEEL +MK GYV T +HD++ EEK + LK+
Sbjct: 638 EVQNKIHTFTVGDSVHPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKY 697
Query: 376 HSEKLAIAFAEHTRGLIVMLP--------------------FKYISEIKNREIIVRDASR 415
HSEKLA+AF I+ +P K+IS+I R II+RD+ R
Sbjct: 698 HSEKLAVAFG------ILAIPAGRPIRVIKNLRVCEDCHNAMKHISKIVGRLIILRDSHR 751
Query: 416 FHHFRNGKCSCGDYW 430
FHHF G+CSCGDYW
Sbjct: 752 FHHFNGGQCSCGDYW 766
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 136/288 (47%), Gaps = 24/288 (8%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E D V+ +++ Y ++G L+E +++ P+R+V W +++G QNG+ ++ ++
Sbjct: 232 ERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDG 291
Query: 63 MRMVGFRPDK--ITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M P+K +++ ++I+ + + Q + E+ +A +V +++I+ Y++
Sbjct: 292 M------PEKNSVSWNAIIAGYVQCKRMDQAR----ELFEAMPCQNVSSWNTMITGYAQN 341
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + F D + W+++IA Y G GEEA++LF +M++ N TF S L
Sbjct: 342 GDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTL 401
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLL----GRCGYLDEAAALIRNMP 236
C+ E G + +V K LE V + L +CG +D+A + +
Sbjct: 402 STCAEIAALELGKQVHGRVV-----KAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIE 456
Query: 237 VKANAIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLS 282
K + W T+++ H A + E + G+ P D +LS
Sbjct: 457 EK-EVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLS 503
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 90/189 (47%), Gaps = 7/189 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E G++L MY K G++ + V + + V++W T+IAG A++G ++ L +
Sbjct: 424 GLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLF 483
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQ-IHAEVVKAGASLDVGVISSLISMYSR 119
M+ G PD +T V V+S+CS + +G + ++ G + + + +I + R
Sbjct: 484 ESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGR 543
Query: 120 CGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGK---GEEAINLFEQMEQKEFEANDVT 175
G LDD+ + D W +++ A HG GE+A + +ME +
Sbjct: 544 AGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPD--NSGMYV 601
Query: 176 FVSLLYACS 184
+S LYA S
Sbjct: 602 LLSNLYAAS 610
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 114/249 (45%), Gaps = 20/249 (8%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E D+V+ +++ Y ++G + E +++ MP +N I+W ++A QNG ED +
Sbjct: 139 ERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFE- 197
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAE-VVKAGASLDVGVISSLISMYSRCG 121
K + + +C + + + + A + D +++IS Y++ G
Sbjct: 198 --------SKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNG 249
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
L ++ + F E DV W++M++ Y +G +EA +F+ M +K N V++ +++
Sbjct: 250 ELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEK----NSVSWNAIIA 305
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
C ++ E F+ M + + + ++ + G + +A MP + ++
Sbjct: 306 GYVQCKRMDQARELFEAMPCQ-----NVSSWNTMITGYAQNGDIAQARNFFDRMPQR-DS 359
Query: 242 IIWKTLLSA 250
I W +++
Sbjct: 360 ISWAAIIAG 368
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 110/248 (44%), Gaps = 22/248 (8%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
DLV+ + + ++ +L + MP R+V++W +++G AQNG ++ + +
Sbjct: 110 DLVSWNVMISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIF---- 165
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIH--AEVVKAGASLDVGVISSLISMYSRCGC 122
D++ + IS LA Q +I + ++ A ++ + ++ Y +
Sbjct: 166 ------DEMPCKNSISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNR 219
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
L D+ F D V W++MI+ Y +G+ EA LFE+ ++ T+ +++
Sbjct: 220 LVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDV----FTWTAMVSG 275
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
G+ ++ FD M +K + ++ +C +D+A L MP + N
Sbjct: 276 YVQNGMLDEARRVFDGMPEK-----NSVSWNAIIAGYVQCKRMDQARELFEAMPCQ-NVS 329
Query: 243 IWKTLLSA 250
W T+++
Sbjct: 330 SWNTMITG 337
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 137/309 (44%), Gaps = 31/309 (10%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
+ D+V + +M++G ++ MP R+ I+W +I+G N D++ L
Sbjct: 46 DADIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSN-------DKFYL 98
Query: 63 MRMVGFR---PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
R + + D +++ +IS C L + + ++ + DV ++++S Y++
Sbjct: 99 ARQLFEKMPTRDLVSWNVMISGCVRYRNLRAARLLFDQMPER----DVVSWNAMLSGYAQ 154
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G + ++ + F E + + W+ M+AAY +G+ E+A LFE E +++ +
Sbjct: 155 NGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFESKADWEL----ISWNCM 210
Query: 180 L--YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
+ Y + + +G+ FD M ++ + ++ + G L EA L PV
Sbjct: 211 MGGYVKRNRLVDARGI--FDRMPERDEVS-----WNTMISGYAQNGELLEAQRLFEESPV 263
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEF 297
+ + W ++S + D A R+ + G+ +++ + + + KR E
Sbjct: 264 R-DVFTWTAMVSGYVQNGMLDEARRVFD---GMPEKNSVSWNAIIAGYVQCKRMDQAREL 319
Query: 298 REAMRERNV 306
EAM +NV
Sbjct: 320 FEAMPCQNV 328
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 363 bits (932), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 180/443 (40%), Positives = 274/443 (61%), Gaps = 15/443 (3%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
L+++A +SL Y K G + + + R+V+AW +I G AQNGL D L + L
Sbjct: 343 SLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRL 402
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M G +P+ T +V+S S LA+L G+Q+HA ++ V V ++LI+MYSR G
Sbjct: 403 MIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGS 462
Query: 123 LDDSVKTFLE-CEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+ D+ K F C Y D + W+SMI + HG G EAI LFE+M + + + +T+V +L
Sbjct: 463 IKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLS 522
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
AC+H GL E+G +F+LM + +P HY C++DLLGR G L+EA IRNMP++ +
Sbjct: 523 ACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDV 582
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
+ W +LLS+C+ HK D+A AE++L ++P ++ Y+ L+N ++ +W+ ++ R++M
Sbjct: 583 VAWGSLLSSCRVHKYVDLAKVAAEKLLLIDPNNSGAYLALANTLSACGKWEDAAKVRKSM 642
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
+++ VKKE G SW++IKN+VH F + D HP+ I + ++ E+K G++PDT + +
Sbjct: 643 KDKAVKKEQGFSWVQIKNKVHIFGVEDALHPQRDAIYCMISKIWKEIKKMGFIPDTNSVL 702
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFA-----EHTRGLIVM---------LPFKYISEIKNRE 407
HD++ E KE L+HHSEKLAIAFA +HT I+ +YIS + RE
Sbjct: 703 HDLEQEVKEQILRHHSEKLAIAFALINTPKHTTVRIMKNLRVCNDCHSAIRYISLLVERE 762
Query: 408 IIVRDASRFHHFRNGKCSCGDYW 430
IIVRDA+RFHHF++G CSC DYW
Sbjct: 763 IIVRDATRFHHFKDGSCSCQDYW 785
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 100/195 (51%), Gaps = 10/195 (5%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
+ K+G+L +V +P + ++W T+I G GL + + + M G P + TF
Sbjct: 89 HAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPTQFTF 148
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK---TFLE 132
+V++SC+ L G+++H+ VVK G S V V +SL++MY++CG DSV F
Sbjct: 149 TNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCG---DSVMAKVVFDR 205
Query: 133 CEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKG 192
D W++MI+ + + + A+ LF+QM + V++ S++ H G +
Sbjct: 206 MRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDI----VSWNSIITGYCHQGYDIRA 261
Query: 193 MEFFDLMVKKYRRKP 207
+E F M+K KP
Sbjct: 262 LETFSFMLKSSSLKP 276
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 122/276 (44%), Gaps = 47/276 (17%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLM-RMVGFRPDKITFVSVISSCSELATLGQGQQI 94
++++W ++I G G L+ ++ M + +PDK T SV+S+C+ +L G+QI
Sbjct: 241 DIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQI 300
Query: 95 HAEVVKAGASLDVGVISSLISMYSRCGC-------------------------------- 122
HA +V+A + V ++LISMY++ G
Sbjct: 301 HAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIG 360
Query: 123 -LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+D + F ++ DVV W++MI Y +G +A+ LF M ++ + N+ T ++L
Sbjct: 361 DIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLS 420
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV------VDLLGRCGYLDEAAALIRNM 235
S + G + + + RLE + V + + R G + +A + ++
Sbjct: 421 VISSLASLDHGKQLHAVAI-------RLEEVSSVSVGNALITMYSRSGSIKDARKIFNHI 473
Query: 236 PVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVN 271
+ + W +++ + H + A + E++L +N
Sbjct: 474 CSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRIN 509
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 184/444 (41%), Positives = 269/444 (60%), Gaps = 15/444 (3%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
FE +L+ +++ +Y K GSL + V M RNVI W ++ G AQNG AED L +
Sbjct: 362 FESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFA 421
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M+ G + +TFVS++ SC+ L +L +G+ IH + + G + D+ +++L+ MY++CG
Sbjct: 422 QMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCG 481
Query: 122 CLDDSVKTFLECEYS-DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
++ + + F S DVVLW+SMI YG HG G +A+ ++ +M ++ + N TF+SLL
Sbjct: 482 KINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLL 541
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH L E+G+ F+ M + + +P +HY C+VDLL R G +EA ALI MP +
Sbjct: 542 SACSHSRLVEQGISLFNSMERDHNIRPIEKHYACLVDLLSRAGRFEEAQALIEKMPFQPG 601
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+ + LLS C+THK+ ++ + ++++L ++ + Y++LSNI+A A+RW V R
Sbjct: 602 TAVLEALLSGCRTHKNINLGIQTSDKLLALDAMNPGIYIMLSNIYAEARRWDKVDYIRGL 661
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
MR R +KK PG S +E N VH F GD SHP EI +LE L S ++ GYVPDT
Sbjct: 662 MRNRGLKKTPGYSLVETGNWVHTFFAGDNSHPNWEEIYHFLESLRSAVETSGYVPDTSCV 721
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTR--GLIVMLP------------FKYISEIKNR 406
+ D+D E K L HSE+LAIAF T G ++ + KYIS+I R
Sbjct: 722 LRDVDEEMKVRMLWGHSERLAIAFGLLTTPAGSLIRITKNLRVCGDCHTVTKYISKIVKR 781
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EIIVRDA+RFHHF NG+CSCGDYW
Sbjct: 782 EIIVRDANRFHHFSNGECSCGDYW 805
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 118/248 (47%), Gaps = 3/248 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E + GSS+ +K G + E ++V MP ++V+ W ++I G Q G + +
Sbjct: 160 GMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLF 219
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G +P IT S+I +C + L G+ +H V+ G D+ V++S + MYS+
Sbjct: 220 FEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKM 279
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ + F + ++V W++MI+ +G E+ +LF ++ + + T VSLL
Sbjct: 280 GDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLL 339
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
CS G ++ + L T +VDL +CG L +A + M + N
Sbjct: 340 QGCSQTASLATGKILHGCAIRSFESNLILS--TAIVDLYSKCGSLKQATFVFNRMKDR-N 396
Query: 241 AIIWKTLL 248
I W +L
Sbjct: 397 VITWTAML 404
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 91/209 (43%), Gaps = 2/209 (0%)
Query: 43 LIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAG 102
++ G Q+G + L+ + LMR D + + +C+ G +I + V+ G
Sbjct: 101 MLCGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKG 160
Query: 103 ASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFE 162
+ V SS+IS + G + ++ + F DVV W+S+I Y G + A LF
Sbjct: 161 MEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFF 220
Query: 163 QMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRC 222
+M + + +T SL+ AC G + G ++ L T VD+ +
Sbjct: 221 EMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILV-LTSFVDMYSKM 279
Query: 223 GYLDEAAALIRNMPVKANAIIWKTLLSAC 251
G ++ A + MP + N + W ++S C
Sbjct: 280 GDIESARWVFYKMPTR-NLVSWNAMISGC 307
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 12/106 (11%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPI-RNVIAWITLIAGKAQNGLAEDVLDQ 59
GF D+V ++L MY K G + E++ I ++V+ W ++I G +G +
Sbjct: 462 GFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGI 521
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASL 105
Y+ M G +P++ TF+S++S+CS H+ +V+ G SL
Sbjct: 522 YHKMIEEGLKPNQTTFLSLLSACS-----------HSRLVEQGISL 556
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 85/197 (43%), Gaps = 7/197 (3%)
Query: 92 QQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFH 151
+ HA+++ S D V + L+ YS L+ + F + +L ++M+ Y
Sbjct: 49 KSTHAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQS 108
Query: 152 GKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEH 211
G+ E + LF M + E + + L AC+ E GME V+K K R
Sbjct: 109 GRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKNRFVG 168
Query: 212 YTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEI--LG 269
+ ++ L + G + EA + MP K + + W +++ D+A ++ E+ G
Sbjct: 169 -SSMISFLVKFGKIGEAQRVFDGMPNK-DVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSG 226
Query: 270 VNPQDAAPYVLLSNIHA 286
+ P +P + S I A
Sbjct: 227 IKP---SPITMTSLIQA 240
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 184/435 (42%), Positives = 264/435 (60%), Gaps = 26/435 (5%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y ++G + + MP R+ I+W +IAG AQ+G E+ L + M+ G R ++ TF
Sbjct: 257 YAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTF 316
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
S +S+C+E+A L G+Q+H VVKAG V ++L+ MY +CG +DD+ F E
Sbjct: 317 TSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEE 376
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
+VV W++MIA Y HG G+EA+ LFE M++ +DVT V +L ACSH GL +KG E+
Sbjct: 377 KEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEY 436
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK 255
F M + Y +HYTC++DLLGR G LD+A L++NMP + +A W LL A + H
Sbjct: 437 FYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHG 496
Query: 256 STDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWL 315
+T++ + A+ I + P ++ YVLLSN++A++ RW V R MR+R VKK PG SW+
Sbjct: 497 NTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWV 556
Query: 316 EIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKH 375
E++N++H FT+GD HP I +LEEL +MK GYV T +HD++ EEK + LK+
Sbjct: 557 EVQNKIHTFTVGDSVHPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKY 616
Query: 376 HSEKLAIAFAEHTRGLIVMLP--------------------FKYISEIKNREIIVRDASR 415
HSEKLA+AF I+ +P K+IS+I R II+RD+ R
Sbjct: 617 HSEKLAVAFG------ILAIPAGRPIRVIKNLRVCEDCHNAMKHISKIVGRLIILRDSHR 670
Query: 416 FHHFRNGKCSCGDYW 430
FHHF G+CSCGDYW
Sbjct: 671 FHHFNGGQCSCGDYW 685
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 136/288 (47%), Gaps = 24/288 (8%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E D V+ +++ Y ++G L+E +++ P+R+V W +++G QNG+ ++ ++
Sbjct: 151 ERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDG 210
Query: 63 MRMVGFRPDK--ITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M P+K +++ ++I+ + + Q + E+ +A +V +++I+ Y++
Sbjct: 211 M------PEKNSVSWNAIIAGYVQCKRMDQAR----ELFEAMPCQNVSSWNTMITGYAQN 260
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + F D + W+++IA Y G GEEA++LF +M++ N TF S L
Sbjct: 261 GDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTL 320
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLL----GRCGYLDEAAALIRNMP 236
C+ E G + +V K LE V + L +CG +D+A + +
Sbjct: 321 STCAEIAALELGKQVHGRVV-----KAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIE 375
Query: 237 VKANAIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLS 282
K + W T+++ H A + E + G+ P D +LS
Sbjct: 376 EK-EVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLS 422
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 90/189 (47%), Gaps = 7/189 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E G++L MY K G++ + V + + V++W T+IAG A++G ++ L +
Sbjct: 343 GLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLF 402
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQ-IHAEVVKAGASLDVGVISSLISMYSR 119
M+ G PD +T V V+S+CS + +G + ++ G + + + +I + R
Sbjct: 403 ESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGR 462
Query: 120 CGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGK---GEEAINLFEQMEQKEFEANDVT 175
G LDD+ + D W +++ A HG GE+A + +ME +
Sbjct: 463 AGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPD--NSGMYV 520
Query: 176 FVSLLYACS 184
+S LYA S
Sbjct: 521 LLSNLYAAS 529
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 114/249 (45%), Gaps = 20/249 (8%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E D+V+ +++ Y ++G + E +++ MP +N I+W ++A QNG ED +
Sbjct: 58 ERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFE- 116
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAE-VVKAGASLDVGVISSLISMYSRCG 121
K + + +C + + + + A + D +++IS Y++ G
Sbjct: 117 --------SKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNG 168
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
L ++ + F E DV W++M++ Y +G +EA +F+ M +K N V++ +++
Sbjct: 169 ELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEK----NSVSWNAIIA 224
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
C ++ E F+ M + + + ++ + G + +A MP + ++
Sbjct: 225 GYVQCKRMDQARELFEAMPCQ-----NVSSWNTMITGYAQNGDIAQARNFFDRMPQR-DS 278
Query: 242 IIWKTLLSA 250
I W +++
Sbjct: 279 ISWAAIIAG 287
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 99/221 (44%), Gaps = 22/221 (9%)
Query: 32 MPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQG 91
MP R+V++W +++G AQNG ++ + + D++ + IS LA Q
Sbjct: 56 MPERDVVSWNAMLSGYAQNGYVKEAKEIF----------DEMPCKNSISWNGMLAAYVQN 105
Query: 92 QQIH--AEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYG 149
+I + ++ A ++ + ++ Y + L D+ F D V W++MI+ Y
Sbjct: 106 GRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYA 165
Query: 150 FHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRL 209
+G+ EA LFE+ ++ T+ +++ G+ ++ FD M +K
Sbjct: 166 QNGELLEAQRLFEESPVRDV----FTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVS--- 218
Query: 210 EHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+ ++ +C +D+A L MP + N W T+++
Sbjct: 219 --WNAIIAGYVQCKRMDQARELFEAMPCQ-NVSSWNTMITG 256
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 362 bits (930), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 179/440 (40%), Positives = 268/440 (60%), Gaps = 14/440 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
DLV+ +++ Y+ +G + E + MP RN++ W +I+G AQNG E+ L +N M+
Sbjct: 360 DLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMK 419
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
GF P F I +C+ LA L G+Q+HA++V+ G + ++LI+MY++CG ++
Sbjct: 420 SEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVE 479
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ FL Y D V W++MIAA G HG G +A+ LFE M +++ + +TF+++L CS
Sbjct: 480 AAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCS 539
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL E+G +F M Y P +HY ++DLL R G EA +I MPV+ IW
Sbjct: 540 HAGLVEEGHRYFKSMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGPPIW 599
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
+ LL+ C+ H + D+ + AE + + PQ YVLLSN++A+ RW V++ R+ MR++
Sbjct: 600 EALLAGCRIHGNMDLGIQAAERLFELMPQHDGTYVLLSNMYATVGRWDDVAKVRKLMRDK 659
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
VKKEPG SW+E++N+VH F + D HP + YLEEL +M+ GY+PDT +HDM
Sbjct: 660 GVKKEPGCSWIEVENKVHVFLVDDIVHPEVQAVYNYLEELGLKMRKLGYIPDTKFVLHDM 719
Query: 365 DSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNREIIV 410
+SE+KEY L HSEKLA+ F + G V + FK++S++ REI+V
Sbjct: 720 ESEQKEYVLSTHSEKLAVGFGLLKLPLGATVRVFKNLRICGDCHNAFKFMSKVVEREIVV 779
Query: 411 RDASRFHHFRNGKCSCGDYW 430
RD RFHHF+NG+CSCG+YW
Sbjct: 780 RDGKRFHHFKNGECSCGNYW 799
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 140/301 (46%), Gaps = 37/301 (12%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E D ++ +++ Y+++G L + + M + V+AW +I+G +G + L+ +
Sbjct: 222 ERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRK 281
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA--GASLD--VGVISSLISMYS 118
M ++G + D+ T+ SV+S+C+ G+Q+HA +++ SLD + V ++L ++Y
Sbjct: 282 MYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYW 341
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAY------------------------------ 148
+CG +D++ + F + D+V W+++++ Y
Sbjct: 342 KCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISG 401
Query: 149 -GFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKP 207
+G GEE++ LF +M+ + FE D F + AC+ G + +V +
Sbjct: 402 LAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLV-RLGFDS 460
Query: 208 RLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEI 267
L ++ + +CG ++ A L MP +++ W +++A H A + E +
Sbjct: 461 SLSAGNALITMYAKCGVVEAAHCLFLTMPY-LDSVSWNAMIAALGQHGHGAQALELFELM 519
Query: 268 L 268
L
Sbjct: 520 L 520
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 135/310 (43%), Gaps = 49/310 (15%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMP--IRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
D+VA ++L + +G+ ++ P IR+ + + +I G + N ++ +
Sbjct: 80 DIVARTTLIAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRD 139
Query: 63 MRMVGFRPDKITFVSVISSCSELA-TLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
+ GFRPD TF SV+ + + + Q QQIH VVK+G+ V+++L+S++ +C
Sbjct: 140 LLRNGFRPDNFTFTSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCA 199
Query: 122 CLD---------------------------------------DSVKTFLECEYSD-VVLW 141
D+ + FL+ VV W
Sbjct: 200 SSPLVSSSSLMAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAW 259
Query: 142 SSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVK 201
++MI+ Y HG EA+ +F +M + ++ T+ S+L AC++ G G + +++
Sbjct: 260 NAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILR 319
Query: 202 KYRRKPRLEHYTCVVDLLG----RCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKST 257
R P L+ V + L +CG +DEA + MPVK + + W +LS
Sbjct: 320 TEPR-PSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVK-DLVSWNAILSGYVNAGRI 377
Query: 258 DMAGRIAEEI 267
D A EE+
Sbjct: 378 DEAKSFFEEM 387
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 85/186 (45%), Gaps = 13/186 (6%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ L AG++L MY K G + + MP + ++W +IA Q+G L+ +
Sbjct: 457 GFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELF 516
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSR 119
LM PD+ITF++V+S+CS + +G + + G + +I + R
Sbjct: 517 ELMLKEDILPDRITFLTVLSTCSHAGLVEEGHRYFKSMSGLYGICPGEDHYARMIDLLCR 576
Query: 120 CGCLDDSVKTFLECEYSD--VVLWSSMIAAYGFHGKGEEAIN----LFEQMEQKEFEAND 173
G ++ K +E + +W +++A HG + I LFE M Q +D
Sbjct: 577 AGKFSEA-KDMIETMPVEPGPPIWEALLAGCRIHGNMDLGIQAAERLFELMPQ-----HD 630
Query: 174 VTFVSL 179
T+V L
Sbjct: 631 GTYVLL 636
>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 878
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 181/442 (40%), Positives = 274/442 (61%), Gaps = 25/442 (5%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
++L Y+K+G++VE +V +P ++++AW ++ G AQ +E ++ + + G
Sbjct: 442 ATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGV 501
Query: 69 RPDKITFVSVISSCSE-LATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV 127
+P++ TF SVI++CS AT+ G+QIHA VK+G S + V S+L++MYS+ G ++ +
Sbjct: 502 KPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAE 561
Query: 128 KTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCG 187
K F E D+V W+SMI YG HG ++A+ +F+ M+ + +DVTF+ +L AC+H G
Sbjct: 562 KVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAG 621
Query: 188 LKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTL 247
L E+G ++F++M+K Y ++EHY+C+VDL R G D+A +I MP A+ IW+TL
Sbjct: 622 LVEEGEKYFNIMIKDYHIDKKIEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTL 681
Query: 248 LSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVK 307
L+AC+ H++ ++ AE+++ + P DA YVLLSNIHA A W+ + R+ M ER VK
Sbjct: 682 LAACRVHRNLELGKLAAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVK 741
Query: 308 KEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSE 367
KE G SW+EIKN++ F GD SHP S + LEEL+ ++K GY PDT HD++ E
Sbjct: 742 KEAGCSWIEIKNRIFSFLAGDVSHPFSDLVYAKLEELSIKLKDMGYQPDTNYVFHDVEEE 801
Query: 368 EKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREI 408
KE L HSE+LAIA+ GLI + P + IS I+ R +
Sbjct: 802 HKEAILSQHSERLAIAY-----GLIALPPGAPIQIEKNLRICGDCHNVIELISLIEERTL 856
Query: 409 IVRDASRFHHFRNGKCSCGDYW 430
IVRD++RFHHF+ G CSCG YW
Sbjct: 857 IVRDSNRFHHFKGGVCSCGGYW 878
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 139/309 (44%), Gaps = 37/309 (11%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D+ G+SL MYMK+ +G + M I+NV++W +L++G A+NGL ++V+
Sbjct: 134 GFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLI 193
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
N M+M G P+ TF +V+ + ++ + + G Q+HA +VK G V ++LI MY +
Sbjct: 194 NQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKS 253
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
+ D+ F D V W+ MI Y G E +F +M + + F + L
Sbjct: 254 EMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTAL 313
Query: 181 YACS-----------HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAA 229
CS HCG+ + G EF + R T ++ +C +DEA
Sbjct: 314 KLCSQQRELNFTKQLHCGVVKNGYEF----AQDIR--------TALMVTYSKCSSVDEAF 361
Query: 230 ALIRNMPVKANAIIWKTLLSAC----KTHKSTDMAGRIAEEILGVNPQD--------AAP 277
L N + W ++ K+ D+ +++ E GV P P
Sbjct: 362 KLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSRE--GVRPNHFTYSTVLAGKP 419
Query: 278 YVLLSNIHA 286
LLS +HA
Sbjct: 420 SSLLSQLHA 428
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 92/186 (49%), Gaps = 7/186 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLM-PIRNVIAWITLIAGKAQNGLAEDVLDQ 59
G+E ++L Y K S+ E K+ + NV+ W +I G QN E +D
Sbjct: 336 GYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDL 395
Query: 60 YNLMRMVGFRPDKITFVSVISS-CSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
+ M G RP+ T+ +V++ S L + Q+HA+++KA V ++L+ Y
Sbjct: 396 FCQMSREGVRPNHFTYSTVLAGKPSSLLS-----QLHAQIIKAYYEKVPSVATALLDAYV 450
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+ G + +S + F D+V WS+M+ E+A+ +F Q+ ++ + N+ TF S
Sbjct: 451 KTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSS 510
Query: 179 LLYACS 184
++ ACS
Sbjct: 511 VINACS 516
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 106/221 (47%), Gaps = 12/221 (5%)
Query: 33 PIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQ 92
P++++ + L+ ++N + L + + G D +T + C L G+
Sbjct: 65 PLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQVVGR 124
Query: 93 QIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHG 152
Q+H + +K+G DV V +SL+ MY + +D F E +VV W+S+++ Y +G
Sbjct: 125 QVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNG 184
Query: 153 KGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY 212
+E I+L QM+ + N TF ++L A + + E G++ ++VK E
Sbjct: 185 LNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKN-----GFEFT 239
Query: 213 TCVVDLLGRCGYLD-----EAAALIRNMPVKANAIIWKTLL 248
T V + L C YL +A A+ +M V+ +++ W ++
Sbjct: 240 TFVCNAL-ICMYLKSEMVGDAEAVFDSMVVR-DSVTWNIMI 278
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 78/149 (52%), Gaps = 4/149 (2%)
Query: 6 LVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRM 65
L S+L MY K G++ EKV R++++W ++I G Q+G A+ L+ + +M+
Sbjct: 541 LCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQN 600
Query: 66 VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV--ISSLISMYSRCGCL 123
G D +TF+ V+++C+ + +G++ ++K +D + S ++ +YSR G
Sbjct: 601 QGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIK-DYHIDKKIEHYSCMVDLYSRAGMF 659
Query: 124 DDSVKTFLECEY-SDVVLWSSMIAAYGFH 151
D ++ + + +W +++AA H
Sbjct: 660 DKAMDIINGMPFPASPTIWRTLLAACRVH 688
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 188/444 (42%), Positives = 271/444 (61%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G DL AG+SL MY K+G + E + + I++ I++ L++G QNG AE+ +
Sbjct: 336 GIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVF 395
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ +PD T VS+I +CS LA L G+ H V+ G +L+ + +SLI MY++C
Sbjct: 396 KKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKC 455
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +D S + F + D+V W++MIA YG HG G+EA LF M+ + FE +DVTF+ L+
Sbjct: 456 GRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLI 515
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL +G +FD M KY PR+EHY C+VDLL R G+LDEA I++MP+KA+
Sbjct: 516 AACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKAD 575
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+W LL AC+ HK+ D+ +++ I + P+ +VLLSNI ++A R+ +E R
Sbjct: 576 VRVWGALLGACRIHKNIDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRII 635
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
+ + KK PG SW+EI +H F GD+SHP S +I L+ + ++K GY DT
Sbjct: 636 QKVKGFKKSPGCSWIEINGSLHAFVGGDQSHPCSPDIYHELDNILIDIKKLGYQADTSFV 695
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEH----------TRGLIVM----LPFKYISEIKNR 406
+ D++ EEKE L +HSEKLAIAF T+ L V KY++ ++NR
Sbjct: 696 LQDLEEEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNR 755
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
IIVRDA+RFHHF+NG+CSCGD+W
Sbjct: 756 TIIVRDANRFHHFKNGQCSCGDFW 779
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 130/260 (50%), Gaps = 17/260 (6%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E ++ G++L MY K LV +V M +RN + W LI G L + + + +NL
Sbjct: 236 EEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFV---LCDRMTEAFNL 292
Query: 63 MRMVGFRPDKITFVSVISS------CSELATLGQGQQIHAEVVKAGASLDVGVISSLISM 116
+ + + F+S S C+ LA L G Q+HA + K+G D+ +SL+SM
Sbjct: 293 FK--DMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSM 350
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
Y++ G ++++ F E D + + ++++ Y +GK EEA +F++M+ + + T
Sbjct: 351 YAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATM 410
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC--VVDLLGRCGYLDEAAALIRN 234
VSL+ ACSH + G ++ R LE C ++D+ +CG +D + +
Sbjct: 411 VSLIPACSHLAALQHGRCSHGSVII---RGLALETSICNSLIDMYAKCGRIDLSRQVFDK 467
Query: 235 MPVKANAIIWKTLLSACKTH 254
MP + + + W T+++ H
Sbjct: 468 MPAR-DIVSWNTMIAGYGIH 486
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 107/236 (45%), Gaps = 4/236 (1%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
++ G L +V +P + A+ LI + G +D Y M P+K TF
Sbjct: 43 HIARGQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTF 102
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
V+ +CS LA L G+ IHA G D+ V ++LI +Y RC + F +
Sbjct: 103 PFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPM 162
Query: 136 SDVVLWSSMIAAYGFHGKGEEAI-NLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGME 194
DVV W++M+A Y HG AI +L + ++ N T VSLL + G +G
Sbjct: 163 RDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTS 222
Query: 195 FFDLMVKKY--RRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
++ Y + + ++ T ++D+ +C +L A + M V+ N + W L+
Sbjct: 223 VHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVR-NEVTWSALI 277
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 124/278 (44%), Gaps = 7/278 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQ- 59
G DL ++L +Y++ V MP+R+V+AW ++AG A +G+ +
Sbjct: 129 GLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHL 188
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLD---VGVISSLISM 116
++ G RP+ T VS++ ++ L QG +HA ++A + V + ++L+ M
Sbjct: 189 LDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDM 248
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
Y++C L + + F + V WS++I + + EA NLF+ M + T
Sbjct: 249 YAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATS 308
Query: 177 V-SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM 235
V S L C+ G + L+ K L ++ + + G ++EA L +
Sbjct: 309 VASALRVCASLADLRMGTQLHALLAKS-GIHADLTAGNSLLSMYAKAGLINEATMLFDEI 367
Query: 236 PVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQ 273
+K + I + LLS + + A + +++ N Q
Sbjct: 368 AIK-DTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQ 404
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 180/449 (40%), Positives = 277/449 (61%), Gaps = 24/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D G++L +MY GS+ + +V M R+++A+ +I G A + L ++ L +
Sbjct: 459 GLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLF 518
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ ++ G +PDK+T+++++++C+ +L ++IH V K G D V ++L+S Y++C
Sbjct: 519 DRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKC 578
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G D+ F + +V+ W+++I HG+G++A+ LFE+M+ + + + VTFVSLL
Sbjct: 579 GSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLL 638
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL E+G +F M + + P +EHY C+VDLLGR G LDEA ALI+ MP +AN
Sbjct: 639 SACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQAN 698
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
IW LL AC+ H + +A R AE L ++ +A YV LS+++A+A W ++ R+
Sbjct: 699 TRIWGALLGACRIHGNVPVAERAAESSLKLDLDNAVVYVALSHMYAAAGMWDSAAKLRKL 758
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M +R V KEPG SW+++ +++H F D+SHP+S +I L+ LT MK++GYVPDT +
Sbjct: 759 MEQRGVTKEPGRSWIQVGDKLHYFVAEDRSHPQSEKIYAELDRLTHAMKMKGYVPDTRSV 818
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
MHD+D EKE + HHSE+LAIA+ GLI P K+IS
Sbjct: 819 MHDVDEGEKENAVCHHSERLAIAY-----GLISTPPGTRIHIFKNLRVCPDCHTATKFIS 873
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+I +REII RD +RFHHF++G CSCGDYW
Sbjct: 874 KIVDREIIARDVNRFHHFKDGVCSCGDYW 902
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 161/307 (52%), Gaps = 9/307 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E D G++L MY K GS + +V + R++IAW T+I G A+ G E+ + Y
Sbjct: 257 GHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVY 316
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
N M+ G P+KIT+V ++++C A L G++IH+ V KAG + D+GV ++LISMYSRC
Sbjct: 317 NQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRC 376
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + D+ F + DV+ W++MI G G EA+ ++++M+Q E N VT+ S+L
Sbjct: 377 GSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSIL 436
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACS E G +V+ T +V++ CG + +A + M ++ +
Sbjct: 437 NACSSPAALEWGRRIHQQVVEAGLATDAHVGNT-LVNMYSMCGSVKDARQVFDRM-IQRD 494
Query: 241 AIIWKTLLSACKTH----KSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSE 296
+ + ++ H ++ + R+ EE G+ P D Y+ + N A++ + E
Sbjct: 495 IVAYNAMIGGYAAHNLGKEALKLFDRLQEE--GLKP-DKVTYINMLNACANSGSLEWARE 551
Query: 297 FREAMRE 303
+R+
Sbjct: 552 IHTLVRK 558
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 144/306 (47%), Gaps = 43/306 (14%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D+ + + +MY K GS+ E +V M ++V++W I G A G +E + +
Sbjct: 156 GLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIF 215
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G P++IT++SV+++ S A L G+ +H+ ++ AG D V ++L+ MY++C
Sbjct: 216 QKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKC 275
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G D + F + D++ W++MI G EEA ++ QM+++ N +T+V LL
Sbjct: 276 GSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILL 335
Query: 181 YAC-----------------------------------SHCGLKEKGMEFFDLMVKKYRR 205
AC S CG + FD MV+K
Sbjct: 336 NACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRK--- 392
Query: 206 KPRLEHYTCVVDLLGRCGYLDEAAALIRNMP---VKANAIIWKTLLSACKTHKSTDMAGR 262
+ +T ++ L + G+ EA + + M V+ N + + ++L+AC + + + R
Sbjct: 393 --DVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRR 450
Query: 263 IAEEIL 268
I ++++
Sbjct: 451 IHQQVV 456
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 141/288 (48%), Gaps = 9/288 (3%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPI--RNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVG 67
++L +MY++ GS+ E +V + + R V +W ++ G Q G E L M+ G
Sbjct: 62 NALINMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHG 121
Query: 68 FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV 127
PD+ T +S +SSC L G++IH + ++AG DV V + +++MY++CG ++++
Sbjct: 122 LAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAR 181
Query: 128 KTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCG 187
+ F + E VV W+ I Y G+ E A +F++MEQ+ N +T++S+L A S
Sbjct: 182 EVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPA 241
Query: 188 LKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTL 247
+ G ++ T +V + +CG + + + V + I W T+
Sbjct: 242 ALKWGKAVHSRILNAGHESDTAVG-TALVKMYAKCGSYKDCRQVFEKL-VNRDLIAWNTM 299
Query: 248 LSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSN--IHASAKRW 291
+ + A + ++ GV P + YV+L N ++++A W
Sbjct: 300 IGGLAEGGYWEEASEVYNQMQREGVMP-NKITYVILLNACVNSAALHW 346
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 97/194 (50%), Gaps = 6/194 (3%)
Query: 54 EDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSL 113
+ +D ++ G + + ++ ++ C E+ L G+Q+H +++ D +++L
Sbjct: 5 DGAVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNAL 64
Query: 114 ISMYSRCGCLDDSVKTFLECEYSDVVL--WSSMIAAYGFHGKGEEAINLFEQMEQKEFEA 171
I+MY +CG ++++ + + + Y + + W++M+ Y +G E+A+ L QM+Q
Sbjct: 65 INMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAP 124
Query: 172 NDVTFVSLLYACSHCGLKEKGMEF-FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAA 230
+ T +S L +C G E G E F M ++ + C++++ +CG ++EA
Sbjct: 125 DRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVAN--CILNMYAKCGSIEEARE 182
Query: 231 LIRNMPVKANAIIW 244
+ M K + + W
Sbjct: 183 VFDKME-KKSVVSW 195
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 180/444 (40%), Positives = 270/444 (60%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ DL S + MY+K G +V V + + +AW ++I+G NG + L Y
Sbjct: 1137 GFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIY 1196
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ MR PD+ TF ++I + S + L QG+Q+HA V+K D V +SL+ MY++C
Sbjct: 1197 HRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKC 1256
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++D+ + F + ++ LW++M+ HG EEA+NLF+ M+ E + V+F+ +L
Sbjct: 1257 GNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGIL 1316
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL + E+ M Y +P +EHY+C+VD LGR G + EA +I MP KA+
Sbjct: 1317 SACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKAS 1376
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A I + LL AC+ + R+A + + P D+A YVLLSNI+A+A RW V++ R+
Sbjct: 1377 ASINRALLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKM 1436
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+ +NVKK+PG SW+++KN +H F + D+SHP++ I +EE+ ++ GYVPDT
Sbjct: 1437 MKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFV 1496
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAF------AEHTRGLIVML--------PFKYISEIKNR 406
+ D++ EEKE +L +HSEKLAIA+ A T +I L KYIS++ R
Sbjct: 1497 LLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFER 1556
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EI++RDA+RFHHFR+G CSCGDYW
Sbjct: 1557 EIVLRDANRFHHFRDGVCSCGDYW 1580
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 127/257 (49%), Gaps = 4/257 (1%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D ++L +Y KSG + E E + + ++ W ++ G + L+ ++L+
Sbjct: 1040 DSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIH 1099
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G + D+IT + +C L L QG+QIHA +KAG D+ V S ++ MY +CG +
Sbjct: 1100 KSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMV 1159
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
++ F D V W+SMI+ +G ++A+ ++ +M Q ++ TF +L+ A S
Sbjct: 1160 NAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASS 1219
Query: 185 HCGLKEKGMEFFDLMVK-KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
E+G + ++K P + T +VD+ +CG +++A L + M V+ N +
Sbjct: 1220 CVTALEQGRQLHANVIKLDCVSDPFVG--TSLVDMYAKCGNIEDAYRLFKKMNVR-NIAL 1276
Query: 244 WKTLLSACKTHKSTDMA 260
W +L H + + A
Sbjct: 1277 WNAMLVGLAQHGNAEEA 1293
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 131/264 (49%), Gaps = 3/264 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + D+ +SL +MY K G +V M ++I+W ++I+ AQ+ L E+ ++ +
Sbjct: 934 GLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLF 993
Query: 61 NLMRMVGFRPDKITFVSVISSCSELAT-LGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ G +PD T SV+ +CS L L +QIH +K G D V ++LI +YS+
Sbjct: 994 IDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVATTLIDVYSK 1053
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G ++++ F + D+ W++M+ Y G++A+ LF + + +++ +T +
Sbjct: 1054 SGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATA 1113
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
AC L ++G + +K L + ++D+ +CG + A ++ N
Sbjct: 1114 AKACGCLVLLDQGKQIHAHAIKA-GFDSDLHVNSGILDMYIKCGDMVN-AGIVFNYISAP 1171
Query: 240 NAIIWKTLLSACKTHKSTDMAGRI 263
+ + W +++S C + + D A RI
Sbjct: 1172 DDVAWTSMISGCVDNGNEDQALRI 1195
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 85/191 (44%), Gaps = 5/191 (2%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKA-----QNGLAEDVLDQ 59
D ++L MY K GSL +V P R+++ W ++ A +G A++ L
Sbjct: 655 DHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLHL 714
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ L+R ++T V+ C L + +H +K G DV V +L+++YS+
Sbjct: 715 FRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSK 774
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG + D+ F DVVLW+ M+ Y G +EA LF + + ++ + +
Sbjct: 775 CGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLI 834
Query: 180 LYACSHCGLKE 190
L S E
Sbjct: 835 LNGVSEVNWDE 845
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 67/114 (58%)
Query: 71 DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTF 130
D +T + V+++ + L G+Q+H VK+G DV V +SL++MYS+ GC + + F
Sbjct: 903 DAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVF 962
Query: 131 LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ ++ D++ W+SMI++ EE++NLF + + + + T S+L ACS
Sbjct: 963 NDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACS 1016
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 19/169 (11%)
Query: 91 GQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGF 150
G+ HA +V +G++ D + ++L++MYS+CG L + + F D+V W++++ AY
Sbjct: 640 GKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAA 699
Query: 151 H-----GKGEEAINLFEQMEQKEFEANDVTFVSLLYAC--SHCGLKEKGMEFFDLMVKKY 203
G +E ++LF + +T +L C S C +G V Y
Sbjct: 700 SVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEG-------VHGY 752
Query: 204 RRKPRLEHYTCV----VDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
K LE V V++ +CG + +A L M + + ++W +L
Sbjct: 753 AIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRER-DVVLWNMML 800
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/251 (20%), Positives = 101/251 (40%), Gaps = 27/251 (10%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E D+ +L ++Y K G + + + M R+V+ W ++ G Q GL ++ +
Sbjct: 757 GLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLF 816
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ G RPD+ + +++ SE+ +G+ + +V A L +
Sbjct: 817 SEFHRSGLRPDEFSVQLILNGVSEV-NWDEGKWLADQVQAYAAKLSLS------------ 863
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
DD+ DV W+ ++ + G AI F M + + VT + +L
Sbjct: 864 ---DDN---------PDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVL 911
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
A + E G + + VK + +V++ + G A + +M +
Sbjct: 912 AAVAGTDDLELGKQVHGIAVKS-GLDSDVSVANSLVNMYSKMGCAYFAREVFNDMK-HLD 969
Query: 241 AIIWKTLLSAC 251
I W +++S+C
Sbjct: 970 LISWNSMISSC 980
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 186/445 (41%), Positives = 268/445 (60%), Gaps = 24/445 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
DL ++L MY K G + V M +R++++W ++I+G A NG + L ++LMR
Sbjct: 852 DLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMR 911
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G P++++ +SV+ +C L L +G+ H+ V++ G D+ V ++++ MYS+CG LD
Sbjct: 912 SSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLD 971
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ F E D+V WS+MIA+YG HG G +AI+LF+QM + + VTF +L ACS
Sbjct: 972 LARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACS 1031
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL E+G +F LM +++ +L +Y C+VDLLGR G L EA LI NMPV+ +A IW
Sbjct: 1032 HSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIW 1091
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
+LL AC+ H + D+A +IA+ + ++P A +VLLSNI+A+ RW V + R+ M R
Sbjct: 1092 GSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARR 1151
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
K G S +E NQVH+F +GD+SHP+ ++ LEEL + MK GYVP T +HD+
Sbjct: 1152 GANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMKHLGYVPLTDFVLHDI 1211
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKN 405
+ E KE L +HSE+LAIAF GLI P K IS+I N
Sbjct: 1212 EEEAKEAALSYHSERLAIAF-----GLINTSPGTTLRITKNLRICGDCHNAIKLISKIVN 1266
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
R I+VRD RFH F +G CSCGDYW
Sbjct: 1267 RVILVRDMHRFHRFEDGVCSCGDYW 1291
Score = 293 bits (751), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 147/364 (40%), Positives = 221/364 (60%), Gaps = 1/364 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFELD ++L MYMK E + + +P ++V++W+ L++G AQNG+A + +
Sbjct: 337 GFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVF 396
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G +PD + V ++++ SEL Q +H VV++G + +V V +SLI +YS+C
Sbjct: 397 RNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKC 456
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM-EQKEFEANDVTFVSL 179
G L D+VK F DVV+WSSMIAAYG HG+G EA+ +F+QM + N+VTF+S+
Sbjct: 457 GSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSI 516
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L ACSH GL E+G++ FD MV Y+ +P EH+ +VDLLGR G L +A +I MP+ A
Sbjct: 517 LSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMDIINRMPIPA 576
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
+W LL AC+ H + +M A+ + ++P A Y+LLSNI+A +W V+E R
Sbjct: 577 GPHVWGALLGACRIHHNIEMGEAAAKNLFWLDPSHAGYYILLSNIYAVDGKWDNVAELRT 636
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
++ER +KK G S +E++ VH F D+ HP S +I L +L ++M Y+PD
Sbjct: 637 RIKERGLKKMFGQSMVEVRGGVHSFLASDRFHPDSQKIYELLRKLEAQMGKEVYIPDLDF 696
Query: 360 DMHD 363
+HD
Sbjct: 697 LLHD 700
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 130/247 (52%), Gaps = 3/247 (1%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ GS+L +Y K G + E KV + + W +++ G QN E+ L ++ M
Sbjct: 138 DMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMV 197
Query: 65 MVG-FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
M+ D +T VSV+S+C++L + G +H V++ D+ +++SL+++Y++ GC
Sbjct: 198 MMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCE 257
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
+ F + DV+ WS+MIA Y + EA+NLF +M +K FE N VT VS L AC
Sbjct: 258 KIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQAC 317
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
+ E+G + + V K + T ++D+ +C DEA L + +P K + +
Sbjct: 318 AVSRNLEEGKKIHKIAVWK-GFELDFSVSTALIDMYMKCSCPDEAVDLFQRLP-KKDVVS 375
Query: 244 WKTLLSA 250
W LLS
Sbjct: 376 WVALLSG 382
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 153/311 (49%), Gaps = 5/311 (1%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F+ DL +SL ++Y K+G + MP ++VI+W T+IA A N A + L+ ++
Sbjct: 237 FDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFH 296
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M F P+ +T VS + +C+ L +G++IH V G LD V ++LI MY +C
Sbjct: 297 EMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCS 356
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
C D++V F DVV W ++++ Y +G +++ +F M + + V V +L
Sbjct: 357 CPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILA 416
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
A S G+ ++ + +V+ + +++L +CG L +A L + M V+ +
Sbjct: 417 ASSELGIFQQALCLHGYVVRSGFNSNVFVGAS-LIELYSKCGSLGDAVKLFKGMIVR-DV 474
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEIL---GVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
+IW ++++A H A I ++++ V P + +LS + +G+ F
Sbjct: 475 VIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFD 534
Query: 299 EAMRERNVKKE 309
+ + ++ +
Sbjct: 535 RMVHDYQLRPD 545
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 135/286 (47%), Gaps = 8/286 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + D + A MY+ + V +P W +I G A +G L+ Y
Sbjct: 747 GLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELY 806
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M G +PDK F + SC+ L+ L +G+ IH +V G S D+ V ++L+ MY++C
Sbjct: 807 SKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKC 866
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ + F + D+V W+SMI+ Y +G E + F+ M N V+ +S+L
Sbjct: 867 GDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVL 926
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC + G KG E+F V + + + T ++D+ +CG LD A L K +
Sbjct: 927 LACGNLGALRKG-EWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGK-D 984
Query: 241 AIIWKTLLSACKTH----KSTDMAGRIAEEILGVNPQDAAPYVLLS 282
+ W ++++ H K+ D+ ++ + GV P +LS
Sbjct: 985 LVCWSAMIASYGIHGHGRKAIDLFDQMVKA--GVRPSHVTFTCVLS 1028
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 127/269 (47%), Gaps = 9/269 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D + L +Y K SL KV P NV W + + + E+ L ++LM
Sbjct: 35 DTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMI 94
Query: 65 -MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVK---AGASLDVGVISSLISMYSRC 120
G PD T + +C+ L L G+ IH K G+ + VG S+L+ +YS+C
Sbjct: 95 CTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVG--SALVELYSKC 152
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEAND-VTFVSL 179
G + +++K F E + D VLW+SM+ Y + EEA+ LF QM + D VT VS+
Sbjct: 153 GQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTLVSV 212
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
+ AC+ + G L++++ L +++L + G AA L MP K
Sbjct: 213 VSACAQLLNVKAGSCVHGLVIRR-EFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEK- 270
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEIL 268
+ I W T+++ +++ + A + E++
Sbjct: 271 DVISWSTMIACYANNEAANEALNLFHEMI 299
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 91/198 (45%), Gaps = 2/198 (1%)
Query: 93 QIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHG 152
Q+H++V K G D + L S+Y++C L + K F E + +V LW+S + +Y
Sbjct: 22 QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREK 81
Query: 153 KGEEAINLFEQMEQKEFEAND-VTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEH 211
+ EE + LF M EA D T L AC+ + E G K +
Sbjct: 82 QWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFV 141
Query: 212 YTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVN 271
+ +V+L +CG + EA + + + ++W ++++ + + + A + +++ ++
Sbjct: 142 GSALVELYSKCGQMGEALKVFEEFQ-RPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMD 200
Query: 272 PQDAAPYVLLSNIHASAK 289
P L+S + A A+
Sbjct: 201 CVVLDPVTLVSVVSACAQ 218
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 180/444 (40%), Positives = 270/444 (60%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ DL S + MY+K G +V V + + +AW ++I+G NG + L Y
Sbjct: 422 GFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIY 481
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ MR PD+ TF ++I + S + L QG+Q+HA V+K D V +SL+ MY++C
Sbjct: 482 HRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKC 541
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++D+ + F + ++ LW++M+ HG EEA+NLF+ M+ E + V+F+ +L
Sbjct: 542 GNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGIL 601
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL + E+ M Y +P +EHY+C+VD LGR G + EA +I MP KA+
Sbjct: 602 SACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKAS 661
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A I + LL AC+ + R+A + + P D+A YVLLSNI+A+A RW V++ R+
Sbjct: 662 ASINRALLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKM 721
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+ +NVKK+PG SW+++KN +H F + D+SHP++ I +EE+ ++ GYVPDT
Sbjct: 722 MKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFV 781
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAF------AEHTRGLIVML--------PFKYISEIKNR 406
+ D++ EEKE +L +HSEKLAIA+ A T +I L KYIS++ R
Sbjct: 782 LLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFER 841
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EI++RDA+RFHHFR+G CSCGDYW
Sbjct: 842 EIVLRDANRFHHFRDGVCSCGDYW 865
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 134/266 (50%), Gaps = 9/266 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + D+ +SL +MY K G +V M ++I+W ++I+ AQ+ L E+ ++ +
Sbjct: 316 GLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLF 375
Query: 61 NLMRMVGFRPDKITFVSVI-----SSCSELATLGQGQQIHAEVVKAGASLDVGVISSLIS 115
+ G +PD T S+ +C L L QG+QIHA +KAG D+ V S ++
Sbjct: 376 IDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILD 435
Query: 116 MYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVT 175
MY +CG + ++ F D V W+SMI+ +G ++A+ ++ +M Q ++ T
Sbjct: 436 MYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYT 495
Query: 176 FVSLLYACSHCGLKEKGMEFFDLMVK-KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRN 234
F +L+ A S E+G + ++K P + T +VD+ +CG +++A L +
Sbjct: 496 FATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVG--TSLVDMYAKCGNIEDAYRLFKK 553
Query: 235 MPVKANAIIWKTLLSACKTHKSTDMA 260
M V+ N +W +L H + + A
Sbjct: 554 MNVR-NIALWNAMLVGLAQHGNAEEA 578
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 132/270 (48%), Gaps = 9/270 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E D+ +L ++Y K G + + + M R+V+ W ++ G Q GL ++ +
Sbjct: 213 GLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLF 272
Query: 61 NLMRMVGFRPDKITFVSVISSCSELAT--LGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
+ G RPD+ + +++ C T L G+Q+H VK+G DV V +SL++MYS
Sbjct: 273 SEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYS 332
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLF-----EQMEQKEFEAND 173
+ GC + + F + ++ D++ W+SMI++ EE++NLF E ++ F
Sbjct: 333 KMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLAS 392
Query: 174 VTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIR 233
+T + AC L ++G + +K L + ++D+ +CG + A ++
Sbjct: 393 ITLATAAKACGCLVLLDQGKQIHAHAIKA-GFDSDLHVNSGILDMYIKCGDMVN-AGIVF 450
Query: 234 NMPVKANAIIWKTLLSACKTHKSTDMAGRI 263
N + + W +++S C + + D A RI
Sbjct: 451 NYISAPDDVAWTSMISGCVDNGNEDQALRI 480
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 111/254 (43%), Gaps = 9/254 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKA-----QNGLAEDVLDQ 59
D ++L MY K GSL +V P R+++ W ++ A +G A++ L
Sbjct: 111 DHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLHL 170
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ L+R ++T V+ C L + +H +K G DV V +L+++YS+
Sbjct: 171 FRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSK 230
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG + D+ F DVVLW+ M+ Y G +EA LF + + ++ + +
Sbjct: 231 CGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLI 290
Query: 180 LYACSHCGLK--EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
L C G E G + + VK + +V++ + G A + +M
Sbjct: 291 LNGCLWAGTDDLELGKQVHGIAVKS-GLDSDVSVANSLVNMYSKMGCAYFAREVFNDMK- 348
Query: 238 KANAIIWKTLLSAC 251
+ I W +++S+C
Sbjct: 349 HLDLISWNSMISSC 362
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 19/169 (11%)
Query: 91 GQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGF 150
G+ HA +V +G++ D + ++L++MYS+CG L + + F D+V W++++ AY
Sbjct: 96 GKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAA 155
Query: 151 H-----GKGEEAINLFEQMEQKEFEANDVTFVSLLYAC--SHCGLKEKGMEFFDLMVKKY 203
G +E ++LF + +T +L C S C +G V Y
Sbjct: 156 SVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEG-------VHGY 208
Query: 204 RRKPRLEHYTCV----VDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
K LE V V++ +CG + +A L M + + ++W +L
Sbjct: 209 AIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRER-DVVLWNMML 256
>gi|147771387|emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera]
Length = 503
Score = 361 bits (927), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 180/444 (40%), Positives = 270/444 (60%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ DL S + MY+K G +V V + + +AW ++I+G NG + L Y
Sbjct: 60 GFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIY 119
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ MR PD+ TF ++I + S + L QG+Q+HA V+K D V +SL+ MY++C
Sbjct: 120 HRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKC 179
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++D+ + F + ++ LW++M+ HG EEA+NLF+ M+ E + V+F+ +L
Sbjct: 180 GNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGIL 239
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL + E+ M Y +P +EHY+C+VD LGR G + EA +I MP KA+
Sbjct: 240 SACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKAS 299
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A I + LL AC+ + R+A + + P D+A YVLLSNI+A+A RW V++ R+
Sbjct: 300 ASINRALLGACRIQGDVEXGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKM 359
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+ +NVKK+PG SW+++KN +H F + D+SHP++ I +EE+ ++ GYVPDT
Sbjct: 360 MKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFV 419
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAF------AEHTRGLIVML--------PFKYISEIKNR 406
+ D++ EEKE +L +HSEKLAIA+ A T +I L KYIS++ R
Sbjct: 420 LLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFER 479
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EI++RDA+RFHHFR+G CSCGDYW
Sbjct: 480 EIVLRDANRFHHFRDGVCSCGDYW 503
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 106/205 (51%), Gaps = 4/205 (1%)
Query: 57 LDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISM 116
L+ ++L+ G + D+IT + +C L L QG+QIHA +KAG D+ V S ++ M
Sbjct: 15 LELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDM 74
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
Y +CG + ++ F D V W+SMI+ +G ++A+ ++ +M Q ++ TF
Sbjct: 75 YIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTF 134
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVK-KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM 235
+L+ A S E+G + ++K P + T +VD+ +CG +++A L + M
Sbjct: 135 ATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVG--TSLVDMYAKCGNIEDAYRLFKKM 192
Query: 236 PVKANAIIWKTLLSACKTHKSTDMA 260
V+ N +W +L H + + A
Sbjct: 193 NVR-NIALWNAMLVGLAQHGNAEEA 216
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 361 bits (927), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 180/445 (40%), Positives = 268/445 (60%), Gaps = 24/445 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
++ GS+L MY K S+ E V + MP +NVI+W ++ G QNG +E+ + + M+
Sbjct: 304 NVFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQ 363
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G PD T SVISSC+ LA+L +G Q H + +G + V ++LI++Y +CG +
Sbjct: 364 RNGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTE 423
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+S + F E D V W++++A Y GK E I LFE+M + + VTF+ +L ACS
Sbjct: 424 NSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACS 483
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
GL EKG+++F+ M+K++ P ++H TC++DLLGR G L+EA I NMP + + W
Sbjct: 484 RAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGW 543
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
TLLS+C+ H ++ A+ ++ + PQ+ A YVLLS+++AS +W V++ R MR++
Sbjct: 544 ATLLSSCRVHGDMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQLRRGMRDK 603
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
V+KEPG SW++ K +VH F+ D+S P +I LE+L +M GYVPD + +HD+
Sbjct: 604 RVRKEPGYSWIKYKGKVHVFSADDQSSPFLGQIYAELEKLNYKMIEEGYVPDMSSVLHDV 663
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKN 405
+ EK L HHSEKLAIAF GLI + P K+IS+I
Sbjct: 664 EESEKIKMLNHHSEKLAIAF-----GLIFVPPGLPIRVIKNLRVCGDCHNATKFISKITQ 718
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
REI+VRDA RFH F++G CSCGD+W
Sbjct: 719 REILVRDAVRFHLFKDGTCSCGDFW 743
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 158/340 (46%), Gaps = 37/340 (10%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNV----------------------- 37
GF D+ GS L MY K G + + ++ MP RNV
Sbjct: 168 GFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLF 227
Query: 38 --------IAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLG 89
I+W +I G QNGL + LD + MR+ GF D+ TF SV+++C L LG
Sbjct: 228 CGLKERDSISWTIMITGLMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALG 287
Query: 90 QGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYG 149
+G+QIHA V++ +V V S+L+ MYS+C + + F +V+ W++M+ YG
Sbjct: 288 EGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYG 347
Query: 150 FHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFF-DLMVKKYRRKPR 208
+G EEA+ +F +M++ E +D T S++ +C++ E+G +F +V
Sbjct: 348 QNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFIT 407
Query: 209 LEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL 268
+ + ++ L G+CG + + L M ++ + + W LL+ + + E +L
Sbjct: 408 VSN--ALITLYGKCGSTENSHRLFTEMNIR-DEVSWTALLAGYAQFGKANETIGLFERML 464
Query: 269 --GVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNV 306
G+ P +LS + +G+ F ++E +
Sbjct: 465 AHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGI 504
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 139/304 (45%), Gaps = 36/304 (11%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM- 63
+L + +++ +Y K G L + +++ LMP R+ ++W I+G A G D + Y LM
Sbjct: 70 NLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLML 129
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS----- 118
+ ++ITF +++ CS+ + G+QI+ +++K G DV V S L+ MY+
Sbjct: 130 KDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLI 189
Query: 119 --------------------------RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHG 152
RCG +++S + F + D + W+ MI +G
Sbjct: 190 YDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNG 249
Query: 153 KGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY 212
EA+++F +M F + TF S+L AC +G + +++ K +
Sbjct: 250 LEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRT-DHKDNVFVG 308
Query: 213 TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GV 270
+ +VD+ +C + A + + MP K N I W +L + ++ A +I E+ GV
Sbjct: 309 SALVDMYSKCRSIKSAETVFKRMPQK-NVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGV 367
Query: 271 NPQD 274
P D
Sbjct: 368 EPDD 371
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 361 bits (927), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 181/449 (40%), Positives = 271/449 (60%), Gaps = 24/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ELD G++L Y KSGS+ + KV MP R++++W +IAG AQNGL L
Sbjct: 718 GYELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFA 777
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G +K +FVS++++CS + L +G+++HAE+VK DV V ++LISMY++C
Sbjct: 778 YQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKC 837
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L+++ + F +VV W++MI AY HG +A++ F M+++ + + TF S+L
Sbjct: 838 GSLEEAQEVFDNFTEKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSIL 897
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+H GL +G F + ++ P +EHY C+V LLGR G EA LI MP +
Sbjct: 898 SACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPD 957
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A +W+TLL AC+ H + +A A L +N ++ A YVLLSN++A+A RW V++ R
Sbjct: 958 AAVWETLLGACRIHGNVALAEHAANNALKLNARNPAVYVLLSNVYAAAGRWDDVAKIRRV 1017
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M R ++KEPG SW+E+ N +H+F D+SHP + EI L+ L+ EM+ GY PDT
Sbjct: 1018 MEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYEELKRLSLEMERAGYSPDTQYV 1077
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
+H++D E +E +L HSE+LAIA+ GL+ P K+IS
Sbjct: 1078 LHNLDKEHQETSLCTHSERLAIAY-----GLLKTPPGTPIRIFKNLRICGDCHTASKFIS 1132
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
++ REII RD++RFH F+NGKCSC D+W
Sbjct: 1133 KLVGREIIARDSNRFHTFKNGKCSCEDFW 1161
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 156/297 (52%), Gaps = 8/297 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +LD+ G++L +MY++ GSL + +V + RNV++W +I G A G + +
Sbjct: 617 GLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELF 676
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ GF+P K TF S++ +C A L +G+++ A ++ +G LD GV ++LIS YS+
Sbjct: 677 WQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSKS 736
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + D+ K F + D++ W+ MIA Y +G G A+ QM+++ N +FVS+L
Sbjct: 737 GSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSIL 796
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACS E+G +VK+ + + + ++ + +CG L+EA + N K N
Sbjct: 797 NACSSFSALEEGKRVHAEIVKR-KMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEK-N 854
Query: 241 AIIWKTLLSACKTH----KSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQG 293
+ W +++A H K+ D + +E G+ P + +LS + S +G
Sbjct: 855 VVTWNAMINAYAQHGLASKALDFFNCMDKE--GIKPDGSTFTSILSACNHSGLVMEG 909
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 144/268 (53%), Gaps = 4/268 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D+ G++LA M+++ G + ++ + R+V+ + LIA AQ+G E+ +QY
Sbjct: 314 GLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQY 373
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
MR G ++ T++SV+++CS LG G+ IH+ + + G S DV + +SLISMY+RC
Sbjct: 374 YQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARC 433
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L + + F D++ W+++IA Y EA+ L++QM+ + + VTF+ LL
Sbjct: 434 GDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLL 493
Query: 181 YACSHCGLKEKG-MEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
AC++ G M D++ + L + ++++ RCG + EA + +
Sbjct: 494 SACTNSSAYSDGKMIHEDILRSGIKSNGHLAN--ALMNMYRRCGSIMEAQNVFEGTRAR- 550
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEI 267
+ I W ++++ H S + A ++ E+
Sbjct: 551 DIISWNSMIAGHAQHGSYEAAYKLFLEM 578
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 161/355 (45%), Gaps = 39/355 (10%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L +MY + GS++E + V R++I+W ++IAG AQ+G E + M+ G
Sbjct: 525 NALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLE 584
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
PDKITF SV+ C L G+QIH ++++G LDV + ++LI+MY RCG L D+ +
Sbjct: 585 PDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEV 644
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F + +V+ W++MI + G+ +A LF QM+ F+ TF S+L AC
Sbjct: 645 FHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACL 704
Query: 190 EKGMEFF---------------DLMVKKYRRKPRLEHYTCVVDLL--------------- 219
++G + + ++ Y + + V D +
Sbjct: 705 DEGKKVIAHILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGY 764
Query: 220 ---GRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQ-DA 275
G G + A ++ V N + ++L+AC + + + R+ EI+ Q D
Sbjct: 765 AQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDV 824
Query: 276 APYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKS 330
L +++A + E + E+NV V+W + N Q + K+
Sbjct: 825 RVGAALISMYAKCGSLEEAQEVFDNFTEKNV-----VTWNAMINAYAQHGLASKA 874
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 133/248 (53%), Gaps = 2/248 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D+ G+SL MY + G L ++ MP R++I+W +IAG A+ + + Y
Sbjct: 415 GHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLY 474
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G +P ++TF+ ++S+C+ + G+ IH +++++G + + ++L++MY RC
Sbjct: 475 KQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRC 534
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + ++ F D++ W+SMIA + HG E A LF +M+++ E + +TF S+L
Sbjct: 535 GSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVL 594
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
C + E G + L+++ + + ++++ RCG L +A + ++ + N
Sbjct: 595 VGCKNPEALELGRQIHMLIIES-GLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHR-N 652
Query: 241 AIIWKTLL 248
+ W ++
Sbjct: 653 VMSWTAMI 660
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 131/254 (51%), Gaps = 2/254 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D+ + L +MY+K S+ + +V MP R+VI+W +LI+ AQ G + +
Sbjct: 112 GVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLF 171
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ GF P KIT++S++++C A L G++IH+++++AG D V +SL++MY +C
Sbjct: 172 EEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKC 231
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
L + + F DVV +++M+ Y EE I LF QM + + VT+++LL
Sbjct: 232 EDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLL 291
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
A + + ++G L V + + T + + RCG + A + + +
Sbjct: 292 DAFTTPSMLDEGKRIHKLAVNE-GLNSDIRVGTALATMFVRCGDVAGAKQALEAFADR-D 349
Query: 241 AIIWKTLLSACKTH 254
+++ L++A H
Sbjct: 350 VVVYNALIAALAQH 363
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 136/284 (47%), Gaps = 4/284 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G++ D +SL +MY K L +V + R+V+++ T++ AQ E+ + +
Sbjct: 213 GYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLF 272
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G PDK+T+++++ + + + L +G++IH V G + D+ V ++L +M+ RC
Sbjct: 273 GQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRC 332
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + + DVV+++++IAA HG EEA + QM N T++S+L
Sbjct: 333 GDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVL 392
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACS G E + + ++ ++ + RCG L A L MP K +
Sbjct: 393 NACSTSKALGAG-ELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMP-KRD 450
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLS 282
I W +++ + A ++ +++ GV P LLS
Sbjct: 451 LISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLS 494
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 106/184 (57%), Gaps = 7/184 (3%)
Query: 69 RP---DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD 125
RP ++ +V ++ +C+ +L + ++IHA++V+AG D+ + + LI+MY +C + D
Sbjct: 76 RPTETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSD 135
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
+ + FL+ DV+ W+S+I+ Y G ++A LFE+M+ F + +T++S+L AC
Sbjct: 136 AHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCS 195
Query: 186 CGLKEKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
E G + +++ Y+R PR+++ ++++ G+C L A + + + + + +
Sbjct: 196 PAELEYGKKIHSKIIEAGYQRDPRVQN--SLLNMYGKCEDLPSARQVFSGI-YRRDVVSY 252
Query: 245 KTLL 248
T+L
Sbjct: 253 NTML 256
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 361 bits (927), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 180/449 (40%), Positives = 272/449 (60%), Gaps = 24/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D+ +SL Y K + + E++ I +++++ ++I AQ G E+ L +
Sbjct: 490 GFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLF 549
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ + +PD+ S++++C+ L+ QG+Q+H ++K G LD+ +SL++MY++C
Sbjct: 550 LEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKC 609
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +DD+ + F E +V WS+MI HG G +A+ LF QM ++ N +T VS+L
Sbjct: 610 GSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVL 669
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+H GL + +F+ M + + KP EHY C++DLLGR G ++EA L+ MP +AN
Sbjct: 670 GACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEAN 729
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A +W LL A + HK ++ R AE + + P+ + +VLL+NI+ASA +W+ V+E R
Sbjct: 730 ASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRL 789
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
MR+ VKKEPG+SW+E+K++V+ F +GD+SH RS EI L+EL+ M GYVP D
Sbjct: 790 MRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLMDKAGYVPMVEID 849
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVM-------------------LPFKYIS 401
+HD++ EKE L HHSEKLA+AF GLI FKYI
Sbjct: 850 LHDVEQSEKELLLYHHSEKLAVAF-----GLIATPQGAPIRVKKNLRVCVDCHTAFKYIC 904
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+I +REIIVRD +RFHHF++G CSCGDYW
Sbjct: 905 KIVSREIIVRDINRFHHFKDGSCSCGDYW 933
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 136/273 (49%), Gaps = 4/273 (1%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E DL L MY K L + L+P +++IAW +I+G +Q + L +
Sbjct: 391 ESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVE 450
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M G ++ T +++ S + L + +Q+H VK+G D+ V++SLI Y +C
Sbjct: 451 MHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSH 510
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
++D+ + F EC D+V ++SMI AY +G+GEEA+ LF +M+ E + + SLL A
Sbjct: 511 VEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNA 570
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
C++ E+G + + + KY + +V++ +CG +D+A + + +
Sbjct: 571 CANLSAFEQGKQ-LHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERG-IV 628
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQ 273
W ++ H A ++ ++L GV+P
Sbjct: 629 SWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPN 661
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 128/250 (51%), Gaps = 2/250 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE D+ ++L MY K ++ +++ +P RNV++W L + Q + + +
Sbjct: 187 GFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLF 246
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M + G +P++ + S++++C+ L +G+ IH ++K G D ++L+ MY++
Sbjct: 247 YEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKV 306
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L D++ F + + D+V W+++IA H E+A+ L QM++ N T S L
Sbjct: 307 GDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSAL 366
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+ GLKE G + ++ K + L +VD+ +C L++A +P K +
Sbjct: 367 KACAGMGLKELGRQLHSSLM-KMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEK-D 424
Query: 241 AIIWKTLLSA 250
I W ++S
Sbjct: 425 LIAWNAIISG 434
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 126/250 (50%), Gaps = 4/250 (1%)
Query: 12 LAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPD 71
L ++Y K + K++ ++++W LI+G AQNGL L ++ M ++G + +
Sbjct: 97 LINLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCN 156
Query: 72 KITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFL 131
+ TF SV+ +CS + L G+Q+H VV +G DV V ++L+ MY++C DS + F
Sbjct: 157 EFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFD 216
Query: 132 ECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEK 191
E +VV W+++ + Y EA+ LF +M + N+ + S++ AC+ +
Sbjct: 217 EIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSR 276
Query: 192 GMEFFDLMVK-KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
G ++K Y P +VD+ + G L +A ++ + + + + W +++
Sbjct: 277 GKIIHGYLIKLGYDWDPF--SANALVDMYAKVGDLADAISVFEKIK-QPDIVSWNAVIAG 333
Query: 251 CKTHKSTDMA 260
C H+ + A
Sbjct: 334 CVLHEHHEQA 343
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 111/228 (48%), Gaps = 1/228 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G++ D + ++L MY K G L + V + ++++W +IAG + E L+
Sbjct: 288 GYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELL 347
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G P+ T S + +C+ + G+Q+H+ ++K D+ V L+ MYS+C
Sbjct: 348 GQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKC 407
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
L+D+ F D++ W+++I+ Y + + EA++LF +M ++ N T ++L
Sbjct: 408 DLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTIL 467
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEA 228
+ + + + L VK + ++D G+C ++++A
Sbjct: 468 KSTAGLQVVHVCRQVHGLSVKSGFHSD-IYVVNSLIDSYGKCSHVEDA 514
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 99/218 (45%), Gaps = 5/218 (2%)
Query: 32 MPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQG 91
+P + I + +Q+ +L NL+ F P +++ ++S C +L G
Sbjct: 19 LPFKPAPKLIQTVPQFSQDPQTTAIL---NLIDKGNFTPTSVSYSKLLSQCCTTKSLRPG 75
Query: 92 QQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFH 151
QIHA + K+G S D + + LI++YS+C + K E D+V WS++I+ Y +
Sbjct: 76 LQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQN 135
Query: 152 GKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEH 211
G G A+ F +M + N+ TF S+L ACS G + ++V
Sbjct: 136 GLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVA 195
Query: 212 YTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
T VV + +C ++ L +P + N + W L S
Sbjct: 196 NTLVV-MYAKCDEFLDSKRLFDEIPER-NVVSWNALFS 231
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 361 bits (927), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 180/449 (40%), Positives = 272/449 (60%), Gaps = 24/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D+ +SL Y K + + E++ I +++++ ++I AQ G E+ L +
Sbjct: 463 GFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLF 522
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ + +PD+ S++++C+ L+ QG+Q+H ++K G LD+ +SL++MY++C
Sbjct: 523 LEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKC 582
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +DD+ + F E +V WS+MI HG G +A+ LF QM ++ N +T VS+L
Sbjct: 583 GSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVL 642
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+H GL + +F+ M + + KP EHY C++DLLGR G ++EA L+ MP +AN
Sbjct: 643 GACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEAN 702
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A +W LL A + HK ++ R AE + + P+ + +VLL+NI+ASA +W+ V+E R
Sbjct: 703 ASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRL 762
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
MR+ VKKEPG+SW+E+K++V+ F +GD+SH RS EI L+EL+ M GYVP D
Sbjct: 763 MRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLMDKAGYVPMVEID 822
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVM-------------------LPFKYIS 401
+HD++ EKE L HHSEKLA+AF GLI FKYI
Sbjct: 823 LHDVEQSEKELLLYHHSEKLAVAF-----GLIATPQGAPIRVKKNLRVCVDCHTAFKYIC 877
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+I +REIIVRD +RFHHF++G CSCGDYW
Sbjct: 878 KIVSREIIVRDINRFHHFKDGSCSCGDYW 906
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 136/273 (49%), Gaps = 4/273 (1%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E DL L MY K L + L+P +++IAW +I+G +Q + L +
Sbjct: 364 ESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVE 423
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M G ++ T +++ S + L + +Q+H VK+G D+ V++SLI Y +C
Sbjct: 424 MHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSH 483
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
++D+ + F EC D+V ++SMI AY +G+GEEA+ LF +M+ E + + SLL A
Sbjct: 484 VEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNA 543
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
C++ E+G + + + KY + +V++ +CG +D+A + + +
Sbjct: 544 CANLSAFEQGKQ-LHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERG-IV 601
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQ 273
W ++ H A ++ ++L GV+P
Sbjct: 602 SWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPN 634
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 125/250 (50%), Gaps = 4/250 (1%)
Query: 12 LAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPD 71
L ++Y K K++ ++++W LI+G AQNGL L ++ M ++G + +
Sbjct: 97 LINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCN 156
Query: 72 KITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFL 131
+ TF SV+ +CS + L G+Q+H VV +G DV V ++L+ MY++C DS + F
Sbjct: 157 EFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFD 216
Query: 132 ECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEK 191
E +VV W+++ + Y EA+ LF +M + N+ + S++ AC+ +
Sbjct: 217 EIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSR 276
Query: 192 GMEFFDLMVK-KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
G ++K Y P +VD+ + G L +A ++ + + + + W +++
Sbjct: 277 GKIIHGYLIKLGYDWDPF--SANALVDMYAKVGDLADAISVFEKIK-QPDIVSWNAVIAG 333
Query: 251 CKTHKSTDMA 260
C H+ + A
Sbjct: 334 CVLHEHHEQA 343
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 109/210 (51%), Gaps = 8/210 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE D+ ++L MY K ++ +++ +P RNV++W L + Q + + +
Sbjct: 187 GFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLF 246
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M + G +P++ + S++++C+ L +G+ IH ++K G D ++L+ MY++
Sbjct: 247 YEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKV 306
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQK--------EFEAN 172
G L D++ F + + D+V W+++IA H E+A+ L QM+++ + E++
Sbjct: 307 GDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQLHSSLMKMDMESD 366
Query: 173 DVTFVSLLYACSHCGLKEKGMEFFDLMVKK 202
V L+ S C L E F+L+ +K
Sbjct: 367 LFVSVGLVDMYSKCDLLEDARMAFNLLPEK 396
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 4/216 (1%)
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
NL+ F P +++ ++S C +L G QIHA + K+G S D + + LI++YS+C
Sbjct: 45 NLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKC 104
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
+ K E D+V WS++I+ Y +G G A+ F +M + N+ TF S+L
Sbjct: 105 RXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVL 164
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACS G + ++V T VV + +C ++ L +P + N
Sbjct: 165 KACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVV-MYAKCDEFLDSKRLFDEIPER-N 222
Query: 241 AIIWKTLLSA-CKTHKSTDMAGRIAEEIL-GVNPQD 274
+ W L S + + G E +L G+ P +
Sbjct: 223 VVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNE 258
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 100/228 (43%), Gaps = 28/228 (12%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G++ D + ++L MY K G L + V + ++++W +IAG + E L+
Sbjct: 288 GYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELL 347
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ +Q+H+ ++K D+ V L+ MYS+C
Sbjct: 348 GQMK---------------------------RQLHSSLMKMDMESDLFVSVGLVDMYSKC 380
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
L+D+ F D++ W+++I+ Y + + EA++LF +M ++ N T ++L
Sbjct: 381 DLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTIL 440
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEA 228
+ + + + L VK + ++D G+C ++++A
Sbjct: 441 KSTAGLQVVHVCRQVHGLSVKSGFHSD-IYVVNSLIDSYGKCSHVEDA 487
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 361 bits (927), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 187/448 (41%), Positives = 274/448 (61%), Gaps = 27/448 (6%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM- 63
D++AG+++ MY K + +KV +P R+V++W TLI G QNGLA + + YN M
Sbjct: 304 DIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMH 363
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
G +P + TFVSV+ + S L L QG ++HA +K G +LDV V + LI +Y++CG L
Sbjct: 364 NHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKL 423
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
+++ F W+++IA G HG G +A++LF QM+Q+E + + VTFVSLL AC
Sbjct: 424 VEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAAC 483
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
SH GL ++G FFDLM Y P +HYTC+VD+LGR G LDEA I++MP+K ++ +
Sbjct: 484 SHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAV 543
Query: 244 WKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
W LL AC+ H + +M ++ + ++P++ YVL+SN++A +W GV R +R
Sbjct: 544 WGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKIGKWDGVDAVRSLVRR 603
Query: 304 RNVKKEPGVSWLEIKNQVHQFTMGDKS--HPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
+N++K PG S +E+K V F G ++ HP+ EI L +L ++MK GYVPD +
Sbjct: 604 QNLQKTPGWSSMEVKGSVSVFYSGTQTEPHPQHEEIQRGLHDLLAKMKSAGYVPDYSFVL 663
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISE 402
D++ +EKE L +HSE+LAIAF G+I P KYIS+
Sbjct: 664 QDVEEDEKEQILNNHSERLAIAF-----GIINTPPGTPLHIYKNLRVCGDCHSATKYISK 718
Query: 403 IKNREIIVRDASRFHHFRNGKCSCGDYW 430
I REIIVRDA+RFHHF++G CSCGD+W
Sbjct: 719 ITEREIIVRDANRFHHFKDGHCSCGDFW 746
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 128/260 (49%), Gaps = 12/260 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +L ++L +Y K G L E V M +R+++ W ++I+ Q G ++ +
Sbjct: 198 GLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELF 257
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVI---SSLISMY 117
+ M G PD +T VS+ S+ ++ + +H V + G DVG I ++++ MY
Sbjct: 258 HGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRG--WDVGDIIAGNAMVDMY 315
Query: 118 SRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE-FEANDVTF 176
++ +D + K F DVV W+++I Y +G EAI ++ M E + TF
Sbjct: 316 AKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTF 375
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY--TCVVDLLGRCGYLDEAAALIRN 234
VS+L A S+ G ++GM L +K L+ Y TC++DL +CG L EA L +
Sbjct: 376 VSVLPAYSYLGGLQQGMRMHALSIKT---GLNLDVYVTTCLIDLYAKCGKLVEAMFLFEH 432
Query: 235 MPVKANAIIWKTLLSACKTH 254
MP ++ W +++ H
Sbjct: 433 MPRRSTG-PWNAIIAGLGVH 451
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 124/274 (45%), Gaps = 23/274 (8%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
++ A SL H Y++ G + E +V MP R+V AW +++G +N A D + M
Sbjct: 101 NVFASGSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMV 160
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G D +T SV+ C L +H VK G S ++ V ++LI +Y + G L
Sbjct: 161 GEGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLT 220
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
++ F D+V W+S+I+A GK A+ LF M + + +T VSL A +
Sbjct: 221 EAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVA 280
Query: 185 HCG-----------LKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIR 233
CG ++ +G + D++ +VD+ + +D A +
Sbjct: 281 QCGDELGAKSVHCYVRRRGWDVGDIIAGN-----------AMVDMYAKMSKIDAAQKVFD 329
Query: 234 NMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEI 267
N+P + + + W TL++ + + A RI ++
Sbjct: 330 NLPDR-DVVSWNTLITGYMQNGLANEAIRIYNDM 362
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 6/168 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G LD+ + L +Y K G LVE + MP R+ W +IAG +G L +
Sbjct: 402 GLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLF 461
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV-ISSLISMYSR 119
+ M+ +PD +TFVS++++CS + QG+ + + + + ++ M R
Sbjct: 462 SQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGR 521
Query: 120 CGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGE----EAINLFE 162
G LD++ + D +W +++ A HG E + NLFE
Sbjct: 522 AGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFE 569
>gi|297823173|ref|XP_002879469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325308|gb|EFH55728.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 583
Score = 361 bits (927), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 180/447 (40%), Positives = 276/447 (61%), Gaps = 17/447 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF LD ++L Y K G + +V MP ++V+AW +L++G QNGLAED + +
Sbjct: 137 GFGLDTYVQAALVTFYSKCGDMEAARQVFDRMPEKSVVAWNSLVSGFEQNGLAEDAIRVF 196
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
MR GF PD TFVS++S+C++ + G +H +V G ++V + ++LI++YSRC
Sbjct: 197 YQMRESGFEPDSATFVSLLSACAQTGAISLGSWVHQYIVSEGLDVNVKLGTALINLYSRC 256
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFE-ANDVTFVSL 179
G + + + F + + ++V W++MI+AYG HG G++A++LF +ME N+VTFV++
Sbjct: 257 GDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGKQAVDLFNKMEDDCGSIPNNVTFVAV 316
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L AC+H GL E G + M + YR P +EH+ C+VD+LGR G+LDEA I+ +
Sbjct: 317 LSACAHAGLVEDGRSVYKRMTESYRLIPGVEHHVCIVDMLGRAGFLDEAYRFIQQLDATG 376
Query: 240 NAI---IWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSE 296
NA +W +L ACK H++ D+ IA+ ++ + P++ +V+LSNI+A + + VS
Sbjct: 377 NATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPENPGHHVMLSNIYALSGKTDEVSH 436
Query: 297 FREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPD 356
R+ M N++K+ G S +E++N+ + F+MGD+SH + EI YLE L S K GY P
Sbjct: 437 IRDRMMRNNLRKQVGYSIIEVENKTYLFSMGDESHQETGEIYRYLETLISRCKEIGYAPV 496
Query: 357 TGADMHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML-----------PFKYISEI 403
+ MH ++ EEKE+ L++HSEKLA+AF + I ++ FKYIS +
Sbjct: 497 SEEVMHQVEEEEKEFALRYHSEKLAVAFGLLKTVDSAITVVKNLRICEDCHSAFKYISIV 556
Query: 404 KNREIIVRDASRFHHFRNGKCSCGDYW 430
NR+IIVRD RFHHF+NG CSC DYW
Sbjct: 557 SNRQIIVRDKLRFHHFQNGSCSCLDYW 583
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 127/255 (49%), Gaps = 7/255 (2%)
Query: 32 MPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQG 91
+P+ + + ++I ++ L + Y M P TF SVI SC++L+ L G
Sbjct: 67 VPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALKIG 126
Query: 92 QQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFH 151
+ +H V +G LD V ++L++ YS+CG ++ + + F VV W+S+++ + +
Sbjct: 127 KGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEAARQVFDRMPEKSVVAWNSLVSGFEQN 186
Query: 152 GKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEH 211
G E+AI +F QM + FE + TFVSLL AC+ G G +V + ++
Sbjct: 187 GLAEDAIRVFYQMRESGFEPDSATFVSLLSACAQTGAISLGSWVHQYIVSE-GLDVNVKL 245
Query: 212 YTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH----KSTDMAGRIAEEI 267
T +++L RCG + +A + M + N W ++SA TH ++ D+ ++ E+
Sbjct: 246 GTALINLYSRCGDVGKAREVFDKMK-ETNVAAWTAMISAYGTHGYGKQAVDLFNKM-EDD 303
Query: 268 LGVNPQDAAPYVLLS 282
G P + +LS
Sbjct: 304 CGSIPNNVTFVAVLS 318
>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g27610-like [Cucumis sativus]
Length = 878
Score = 361 bits (926), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 181/442 (40%), Positives = 273/442 (61%), Gaps = 25/442 (5%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
++L Y+K+G++VE +V +P ++++AW ++ G AQ +E ++ + + G
Sbjct: 442 ATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGV 501
Query: 69 RPDKITFVSVISSCSE-LATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV 127
+P++ TF SVI++CS AT+ G+QIHA VK+G S + V S+L++MYS+ G ++ +
Sbjct: 502 KPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAE 561
Query: 128 KTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCG 187
K F E D+V W+SMI YG HG ++A+ +F+ M+ + +DVTF+ +L AC+H G
Sbjct: 562 KVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAG 621
Query: 188 LKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTL 247
L E+G ++F++M+K Y + EHY+C+VDL R G D+A +I MP A+ IW+TL
Sbjct: 622 LVEEGEKYFNIMIKDYHIDKKXEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTL 681
Query: 248 LSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVK 307
L+AC+ H++ ++ AE+++ + P DA YVLLSNIHA A W+ + R+ M ER VK
Sbjct: 682 LAACRVHRNLELGKLAAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVK 741
Query: 308 KEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSE 367
KE G SW+EIKN++ F GD SHP S + LEEL+ ++K GY PDT HD++ E
Sbjct: 742 KEAGCSWIEIKNRIFSFLAGDVSHPFSDLVYAKLEELSIKLKDMGYQPDTNYVFHDVEEE 801
Query: 368 EKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREI 408
KE L HSE+LAIA+ GLI + P + IS I+ R +
Sbjct: 802 HKEAILSQHSERLAIAY-----GLIALPPGAPIQIEKNLRICGDCHNVIELISLIEERTL 856
Query: 409 IVRDASRFHHFRNGKCSCGDYW 430
IVRD++RFHHF+ G CSCG YW
Sbjct: 857 IVRDSNRFHHFKGGVCSCGGYW 878
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 139/309 (44%), Gaps = 37/309 (11%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D+ G+SL MYMK+ +G + M I+NV++W +L++G A+NGL ++V+
Sbjct: 134 GFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLI 193
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
N M+M G P+ TF +V+ + ++ + + G Q+HA +VK G V ++LI MY +
Sbjct: 194 NQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKS 253
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
+ D+ F D V W+ MI Y G E +F +M + + F + L
Sbjct: 254 EMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTAL 313
Query: 181 YACS-----------HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAA 229
CS HCG+ + G EF + R T ++ +C +DEA
Sbjct: 314 KLCSQQRELNFTKQLHCGVVKNGYEF----AQDIR--------TALMVTYSKCSSVDEAF 361
Query: 230 ALIRNMPVKANAIIWKTLLSAC----KTHKSTDMAGRIAEEILGVNPQD--------AAP 277
L N + W ++ K+ D+ +++ E GV P P
Sbjct: 362 KLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSRE--GVRPNHFTYSTVLAGKP 419
Query: 278 YVLLSNIHA 286
LLS +HA
Sbjct: 420 SSLLSQLHA 428
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 92/186 (49%), Gaps = 7/186 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLM-PIRNVIAWITLIAGKAQNGLAEDVLDQ 59
G+E ++L Y K S+ E K+ + NV+ W +I G QN + +D
Sbjct: 336 GYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDL 395
Query: 60 YNLMRMVGFRPDKITFVSVISS-CSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
+ M G RP+ T+ +V++ S L + Q+HA+++KA V ++L+ Y
Sbjct: 396 FCQMSREGVRPNHFTYSTVLAGKPSSLLS-----QLHAQIIKAYYEKVPSVATALLDAYV 450
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+ G + +S + F D+V WS+M+ E+A+ +F Q+ ++ + N+ TF S
Sbjct: 451 KTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSS 510
Query: 179 LLYACS 184
++ ACS
Sbjct: 511 VINACS 516
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 106/221 (47%), Gaps = 12/221 (5%)
Query: 33 PIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQ 92
P++++ + L+ ++N + L + + G D +T + C L G+
Sbjct: 65 PLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQVVGR 124
Query: 93 QIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHG 152
Q+H + +K+G DV V +SL+ MY + +D F E +VV W+S+++ Y +G
Sbjct: 125 QVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNG 184
Query: 153 KGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY 212
+E I+L QM+ + N TF ++L A + + E G++ ++VK E
Sbjct: 185 LNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKN-----GFEFT 239
Query: 213 TCVVDLLGRCGYLD-----EAAALIRNMPVKANAIIWKTLL 248
T V + L C YL +A A+ +M V+ +++ W ++
Sbjct: 240 TFVCNAL-ICMYLKSEMVGDAEAVFDSMVVR-DSVTWNIMI 278
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 77/149 (51%), Gaps = 4/149 (2%)
Query: 6 LVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRM 65
L S+L MY K G++ EKV R++++W ++I G Q+G A+ L+ + +M+
Sbjct: 541 LCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQN 600
Query: 66 VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV--ISSLISMYSRCGCL 123
G D +TF+ V+++C+ + +G++ ++K +D S ++ +YSR G
Sbjct: 601 QGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIK-DYHIDKKXEHYSCMVDLYSRAGMF 659
Query: 124 DDSVKTFLECEY-SDVVLWSSMIAAYGFH 151
D ++ + + +W +++AA H
Sbjct: 660 DKAMDIINGMPFPASPTIWRTLLAACRVH 688
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 361 bits (926), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 180/429 (41%), Positives = 267/429 (62%), Gaps = 14/429 (3%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y ++G + + K+ +MP R+ ++W +I+G AQNG E+ L+ + M+ G ++ TF
Sbjct: 335 YGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTF 394
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
+S+C+++A L G+Q+H +VVKAG V ++L+ MY +CG D++ F E
Sbjct: 395 SCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEE 454
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
DVV W++MIA Y HG G +A+ LFE M++ + +++T V +L ACSH GL ++G E+
Sbjct: 455 KDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEY 514
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK 255
F M + Y KP +HYTC++DLLGR G L+EA L+RNMP A W LL A + H
Sbjct: 515 FYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALLGASRIHG 574
Query: 256 STDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWL 315
+T++ + AE + + PQ++ YVLLSN++A++ RW V + R MRE V+K G SW+
Sbjct: 575 NTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDVGKMRSKMREAGVQKVTGYSWV 634
Query: 316 EIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKH 375
E++N++H F++GD HP I +LEEL +M+ GYV T +HD++ EEKE+ LK+
Sbjct: 635 EVQNKIHTFSVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKY 694
Query: 376 HSEKLAIAFAEHT----RGLIVML----------PFKYISEIKNREIIVRDASRFHHFRN 421
HSEKLA+AF T R + VM K+IS+I R II+RD+ RFHHF
Sbjct: 695 HSEKLAVAFGILTIPAGRPIRVMKNLRVCQDCHNAIKHISKIVGRLIILRDSHRFHHFSE 754
Query: 422 GKCSCGDYW 430
G CSCGDYW
Sbjct: 755 GICSCGDYW 763
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 142/310 (45%), Gaps = 22/310 (7%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+++ +++ Y + G L + +++ PIR+V W +++G QNG+ ++ ++ M
Sbjct: 231 DVISWNTMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMP 290
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+ ++I++ ++++ + + I E+ +A ++ +++I+ Y + G +
Sbjct: 291 V----KNEISYNAMLAGYVQYKKM----VIAGELFEAMPCRNISSWNTMITGYGQNGGIA 342
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ K F D V W+++I+ Y +G EEA+N+F +M++ +N TF L C+
Sbjct: 343 QARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCA 402
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVD--LLG---RCGYLDEAAALIRNMPVKA 239
E G + +VK C V LLG +CG DEA + + K
Sbjct: 403 DIAALELGKQVHGQVVKAGFET------GCFVGNALLGMYFKCGSTDEANDVFEGIEEK- 455
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLSNIHASAKRWQGVSEF 297
+ + W T+++ H A + E + GV P + +LS S +G F
Sbjct: 456 DVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYF 515
Query: 298 REAMRERNVK 307
R+ NVK
Sbjct: 516 YSMDRDYNVK 525
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 90/194 (46%), Gaps = 17/194 (8%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE G++L MY K GS E V + ++V++W T+IAG A++G L +
Sbjct: 421 GFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLF 480
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV------ISSLI 114
M+ G +PD+IT V V+S+CS + +G + + + D V + +I
Sbjct: 481 ESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDR-----DYNVKPTSKHYTCMI 535
Query: 115 SMYSRCGCLDDSVKTFLECEYSD-VVLWSSMIAAYGFHGK---GEEAINLFEQMEQKEFE 170
+ R G L+++ + W +++ A HG GE+A + +ME +
Sbjct: 536 DLLGRAGRLEEAENLMRNMPFDPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQ--N 593
Query: 171 ANDVTFVSLLYACS 184
+ +S LYA S
Sbjct: 594 SGMYVLLSNLYAAS 607
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 121/275 (44%), Gaps = 41/275 (14%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E DL + + + Y+++ L E K+ LMP ++V++W +++G AQNG ++ + +N
Sbjct: 105 ERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNK 164
Query: 63 M-------------------RMVGFRP--------DKITFVSVISSCSELATLGQGQQIH 95
M R+ R + I++ ++ + LG +Q+
Sbjct: 165 MPHRNSISWNGLLAAYVHNGRLKEARRLFESQSNWELISWNCLMGGYVKRNMLGDARQLF 224
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGE 155
+ DV +++IS Y++ G L + + F E DV W++M++ Y +G +
Sbjct: 225 DRM----PVRDVISWNTMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVD 280
Query: 156 EAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV 215
EA F++M K N++++ ++L E F+ M + + + +
Sbjct: 281 EARKYFDEMPVK----NEISYNAMLAGYVQYKKMVIAGELFEAMPCR-----NISSWNTM 331
Query: 216 VDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+ G+ G + +A L MP + + + W ++S
Sbjct: 332 ITGYGQNGGIAQARKLFDMMPQR-DCVSWAAIISG 365
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 124/297 (41%), Gaps = 55/297 (18%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNG---LAEDVLDQYN 61
D+V + +M++G +V MP R+ +++ +I+G +N LA D+ D+
Sbjct: 45 DIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKMP 104
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
D ++ +++ LG+ ++ + K DV ++++S Y++ G
Sbjct: 105 -------ERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKK----DVVSWNAMLSGYAQNG 153
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+D++ + F + + + + W+ ++AAY +G+ +EA LFE E + +
Sbjct: 154 FVDEAREVFNKMPHRNSISWNGLLAAYVHNGRLKEARRLFESQSNWEL---------ISW 204
Query: 182 ACSHCGLKEKGM-----EFFD-----------LMVKKYRRKPRLEH-------------- 211
C G ++ M + FD M+ Y + L
Sbjct: 205 NCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQVGDLSQAKRLFNESPIRDVF 264
Query: 212 -YTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEI 267
+T +V + G +DEA MPVK N I + +L+ +K +AG + E +
Sbjct: 265 TWTAMVSGYVQNGMVDEARKYFDEMPVK-NEISYNAMLAGYVQYKKMVIAGELFEAM 320
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 361 bits (926), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 180/434 (41%), Positives = 270/434 (62%), Gaps = 25/434 (5%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y + G++ + + + MP R+ I+W +I+G AQ+G +E+ L + M+ G ++
Sbjct: 349 YAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSAL 408
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
+SSC+E+A L G+Q+H +VKAG ++L++MY +CG ++++ F +
Sbjct: 409 ACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITE 468
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
D+V W++MIA Y HG G+EA+ LFE M+ + +DVT V +L ACSH GL +KGME+
Sbjct: 469 KDIVSWNTMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTGLVDKGMEY 527
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK 255
F+ M + Y +HYTC++DLLGR G LDEA L+++MP +A W LL A + H
Sbjct: 528 FNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHG 587
Query: 256 STDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWL 315
T++ + AE++ + P ++ YVLLSN++A++ RW+ V E R MR++ VKK PG SW+
Sbjct: 588 DTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWV 647
Query: 316 EIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKH 375
EI+N+ H FT+GD SHP + I YLEEL E+K G+V T +HD++ EEKE+ LK+
Sbjct: 648 EIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKY 707
Query: 376 HSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREIIVRDASRF 416
HSEKLA+AF G++ + P K+IS+I R+IIVRD++RF
Sbjct: 708 HSEKLAVAF-----GILSIPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRF 762
Query: 417 HHFRNGKCSCGDYW 430
HHF G CSCGDYW
Sbjct: 763 HHFSEGSCSCGDYW 776
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 129/270 (47%), Gaps = 15/270 (5%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y ++G L E ++ +PIR+V AW +++G QNG+ ++ + M P+K
Sbjct: 256 YAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEM------PEK--- 306
Query: 76 VSVISSCSELATLGQGQQIHA--EVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLEC 133
+ +S + +A Q QQI E+ S + +++++ Y++CG +D + F E
Sbjct: 307 -NEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEM 365
Query: 134 EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGM 193
D + W++MI+ Y G+ EEA++LF +M++ N L +C+ E G
Sbjct: 366 PQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGK 425
Query: 194 EFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKT 253
+ +VK + + ++ + G+CG ++EA + ++ K + + W T+++
Sbjct: 426 QLHGRLVKAGFQTGYIAG-NALLAMYGKCGSIEEAFDVFEDITEK-DIVSWNTMIAGYAR 483
Query: 254 HKSTDMAGRIAEEI-LGVNPQDAAPYVLLS 282
H A + E + + + P D +LS
Sbjct: 484 HGFGKEALALFESMKMTIKPDDVTLVGVLS 513
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 97/191 (50%), Gaps = 12/191 (6%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ +AG++L MY K GS+ E V + +++++W T+IAG A++G ++ L +
Sbjct: 435 GFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALF 494
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSR 119
M+M +PD +T V V+S+CS + +G + + + G + + + +I + R
Sbjct: 495 ESMKMT-IKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGR 553
Query: 120 CGCLDDSVKTFLECE-YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEA---NDVT 175
G LD+++ Y D W +++ A HG E L E+ +K FE N
Sbjct: 554 AGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTE----LGEKAAEKVFEMEPDNSGM 609
Query: 176 FVSL--LYACS 184
+V L LYA S
Sbjct: 610 YVLLSNLYAAS 620
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 125/273 (45%), Gaps = 41/273 (15%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
DL++ + + Y+K+G+L + MP ++V++W +++G AQNG E+ ++ M
Sbjct: 121 DLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQML 180
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHA-----EVVKAGASL-------------- 105
+ ++I++ ++S+ + + +++ E+V +
Sbjct: 181 V----KNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARS 236
Query: 106 --------DVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEA 157
D + +I+ Y++ G L ++ + F E DV W++M++ + +G +EA
Sbjct: 237 LFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEA 296
Query: 158 INLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVD 217
+FE+M +K N+V++ +++ EK E FD M + + +V
Sbjct: 297 TRIFEEMPEK----NEVSWNAMIAGYVQSQQIEKARELFDQMPSR-----NTSSWNTMVT 347
Query: 218 LLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+CG +D+A L MP + + I W ++S
Sbjct: 348 GYAQCGNIDQAKILFDEMPQR-DCISWAAMISG 379
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 105/264 (39%), Gaps = 51/264 (19%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+V + YM+ G V M R+ + + +I+G N ++++ R
Sbjct: 59 DIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSN-------NKFDCAR 111
Query: 65 MVGFR-PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
V + PD+ D+ + ++S Y + G L
Sbjct: 112 KVFEKMPDR---------------------------------DLISWNVMLSGYVKNGNL 138
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
+ F + DVV W++M++ + +G EEA +F+QM K N++++ LL A
Sbjct: 139 SAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVK----NEISWNGLLSAY 194
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
G E FD + + + C++ R LD+A +L MPV+ + I
Sbjct: 195 VQNGRIEDARRLFD-----SKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVR-DKIS 248
Query: 244 WKTLLSACKTHKSTDMAGRIAEEI 267
W +++ + A R+ EE+
Sbjct: 249 WNIMITGYAQNGLLSEARRLFEEL 272
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 67/140 (47%), Gaps = 18/140 (12%)
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL--YACSHCGLKEKGM 193
SD+V W+ I+AY G+ E A+++F M ++ + VT+ +++ Y ++
Sbjct: 58 SDIVKWNRKISAYMRKGQCESALSVFNGMRRR----STVTYNAMISGYLSNNK------- 106
Query: 194 EFFDLMVKKYRRKPRLEHYTCVVDLLG--RCGYLDEAAALIRNMPVKANAIIWKTLLSAC 251
FD K + + P + + V L G + G L A AL MP K + + W +LS
Sbjct: 107 --FDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEK-DVVSWNAMLSGF 163
Query: 252 KTHKSTDMAGRIAEEILGVN 271
+ + A +I +++L N
Sbjct: 164 AQNGFVEEARKIFDQMLVKN 183
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 361 bits (926), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 173/429 (40%), Positives = 271/429 (63%), Gaps = 14/429 (3%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y + G + E + + MP R+ ++W +IAG +Q+G + + L + LM G R ++ +F
Sbjct: 348 YAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSF 407
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
S +S+C+++ L G+Q+H +VK G V ++L+ MY +CG ++++ F E
Sbjct: 408 SSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAG 467
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
D+V W++MIA Y HG GEEA+ FE M+++ + +D T V++L ACSH GL +KG ++
Sbjct: 468 KDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQY 527
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK 255
F M + Y +P +HY C+VDLLGR G L+EA L++NMP + +A IW TLL A + H
Sbjct: 528 FHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRVHG 587
Query: 256 STDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWL 315
+T++A A++I + P+++ YVLLSN++AS+ RW V + R MR++ VKK PG SW+
Sbjct: 588 NTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWI 647
Query: 316 EIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKH 375
EI+N+ H F++GD+ HP EI +LE+L MK GYV T +HD++ EEKE +++
Sbjct: 648 EIQNKTHTFSVGDEFHPEKDEIFAFLEDLDLRMKKAGYVSKTSVVLHDVEEEEKERMVRY 707
Query: 376 HSEKLAIAFA----EHTRGLIVML----------PFKYISEIKNREIIVRDASRFHHFRN 421
HSE+LA+A+ R + V+ KY++++ R II+RD +RFHHF++
Sbjct: 708 HSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMAKVTGRLIILRDNNRFHHFKD 767
Query: 422 GKCSCGDYW 430
G CSCGDYW
Sbjct: 768 GSCSCGDYW 776
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 133/287 (46%), Gaps = 26/287 (9%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+V+ +++ Y ++G + E ++ P+ +V W +++G QN + E+ + ++ M
Sbjct: 244 DVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRM- 302
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIH--AEVVKAGASLDVGVISSLISMYSRCGC 122
P++ + +S + LA QG+++ E+ +V +++I+ Y++CG
Sbjct: 303 -----PER----NEVSWNAMLAGYVQGERVEMAKELFDVMPCRNVSTWNTMITGYAQCGK 353
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
+ ++ F + D V W++MIA Y G EA+ LF ME++ N +F S L
Sbjct: 354 ISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALST 413
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVD-----LLGRCGYLDEAAALIRNMPV 237
C+ E G + +VK C V + +CG ++EA L + M
Sbjct: 414 CADVVALELGKQLHGRLVKGGYET------GCFVGNALLLMYCKCGSIEEANDLFKEMAG 467
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLS 282
K + + W T+++ H + A R E + G+ P DA +LS
Sbjct: 468 K-DIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLS 513
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 94/187 (50%), Gaps = 3/187 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+E G++L MY K GS+ E + + M +++++W T+IAG +++G E+ L +
Sbjct: 434 GYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFF 493
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQ-IHAEVVKAGASLDVGVISSLISMYSR 119
M+ G +PD T V+V+S+CS + +G+Q H G + + ++ + R
Sbjct: 494 ESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGR 553
Query: 120 CGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDV-TFV 177
G L+++ + D +W +++ A HG E A +++ E E + + +
Sbjct: 554 AGLLEEAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLL 613
Query: 178 SLLYACS 184
S LYA S
Sbjct: 614 SNLYASS 620
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 124/271 (45%), Gaps = 33/271 (12%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAED---VLDQ 59
E DLV+ + + Y+++ +L + ++ MP R+V +W T+++G AQNG +D V D+
Sbjct: 118 ERDLVSWNVMIKGYVRNRNLGKARELFERMPERDVCSWNTILSGYAQNGCVDDARRVFDR 177
Query: 60 --------YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASL------ 105
+N + + K+ V+ E L + VK +
Sbjct: 178 MPEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWALVSWNCLLGGFVKKKKIVEARQFF 237
Query: 106 ------DVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAIN 159
DV +++I+ Y++ G +D++ + F E DV W++M++ Y + EEA
Sbjct: 238 DSMKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEARE 297
Query: 160 LFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLL 219
LF++M ++ N+V++ ++L E E FD+M + + + ++
Sbjct: 298 LFDRMPER----NEVSWNAMLAGYVQGERVEMAKELFDVMPCR-----NVSTWNTMITGY 348
Query: 220 GRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+CG + EA L MP K + + W +++
Sbjct: 349 AQCGKISEAKNLFDKMP-KRDPVSWAAMIAG 378
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 111/244 (45%), Gaps = 36/244 (14%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF----RPD 71
YM++G E +V + MP + +++ +I+G +NG ++ L RM+ F D
Sbjct: 69 YMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNG-------EFELARML-FDEMPERD 120
Query: 72 KITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFL 131
+++ +I LG+ +++ + + DV ++++S Y++ GC+DD+ + F
Sbjct: 121 LVSWNVMIKGYVRNRNLGKARELFERMPER----DVCSWNTILSGYAQNGCVDDARRVFD 176
Query: 132 ECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEK 191
+ V W+++++AY + K EEA LF E + + + C G +K
Sbjct: 177 RMPEKNDVSWNALLSAYVQNSKLEEACVLFGSRE---------NWALVSWNCLLGGFVKK 227
Query: 192 -----GMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKT 246
+FFD M K R + + ++ + G +DEA L PV + W
Sbjct: 228 KKIVEARQFFDSM--KVR---DVVSWNTIITGYAQNGEIDEARQLFDESPVH-DVFTWTA 281
Query: 247 LLSA 250
++S
Sbjct: 282 MVSG 285
>gi|296083568|emb|CBI23560.3| unnamed protein product [Vitis vinifera]
Length = 497
Score = 361 bits (926), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 172/436 (39%), Positives = 277/436 (63%), Gaps = 14/436 (3%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G+SL MY +SG + + K ++ +N++++ ++ G A+N +E+ +N + G
Sbjct: 62 GNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGI 121
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
TF S++S + + +G+G+QIH ++K G + + ++LISMYSRCG ++ + +
Sbjct: 122 GISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQ 181
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F E E +V+ W+SMI + HG A+ +F +M + + N++T+V++L ACSH G+
Sbjct: 182 VFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGM 241
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
+G + F+ M K++ PR+EHY C+VDLLGR G L EA I +MP+ A+A++W+TLL
Sbjct: 242 ISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLL 301
Query: 249 SACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKK 308
AC+ H +T++ AE IL P D A Y+LLSN+HASA +W+ V + R++M+ERN+ K
Sbjct: 302 GACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIK 361
Query: 309 EPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEE 368
E G SW+E++N+VH+F +G+ SHP++ +I L++L S++K GY+PDT +HD++ E+
Sbjct: 362 EAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQ 421
Query: 369 KEYNLKHHSEKLAIAFA----EHTRGLIVM----------LPFKYISEIKNREIIVRDAS 414
KE L HSEK+A+AF ++ + + KYIS REI+VRD++
Sbjct: 422 KEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSN 481
Query: 415 RFHHFRNGKCSCGDYW 430
RFHH +NG CSC DYW
Sbjct: 482 RFHHIKNGVCSCNDYW 497
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 91/170 (53%), Gaps = 2/170 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G++ + ++L MY + G++ +V M RNVI+W ++I G A++G A L+ +
Sbjct: 155 GYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMF 214
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSR 119
+ M G +P++IT+V+V+S+CS + + +GQ+ + K G + + ++ + R
Sbjct: 215 HKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGR 274
Query: 120 CGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE 168
G L ++++ +D ++W +++ A HG E + E + ++E
Sbjct: 275 SGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQE 324
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 70/145 (48%), Gaps = 15/145 (10%)
Query: 116 MYSRC---GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGK-GEEAINLFEQMEQKEFEA 171
MY++C G +DDS K F + +V+ W+++I AY G+ +EAI LF +M
Sbjct: 1 MYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISASVNC 60
Query: 172 NDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAAL 231
+ +S +YA S G E + FD++ +K L Y +VD + +EA L
Sbjct: 61 VGNSLIS-MYARS--GRMEDARKAFDILFEK-----NLVSYNAIVDGYAKNLKSEEAFLL 112
Query: 232 ---IRNMPVKANAIIWKTLLSACKT 253
I + + +A + +LLS +
Sbjct: 113 FNEIADTGIGISAFTFASLLSGAAS 137
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 361 bits (926), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 171/436 (39%), Positives = 279/436 (63%), Gaps = 14/436 (3%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G+SL MY + G++ K ++ +N++++ T++ A++ +E+ + +N + G
Sbjct: 288 GNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGT 347
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
+ TF S++S S + +G+G+QIH+ ++K+G ++ + ++LISMYSRCG ++ + +
Sbjct: 348 GVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQ 407
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F E +V+ W+SMI + HG A+ F +M + N+VT++++L ACSH GL
Sbjct: 408 VFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGL 467
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
+G++ F M ++ PR+EHY CVVDLLGR G+L+EA L+ +MP KA+A++ +T L
Sbjct: 468 ISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFL 527
Query: 249 SACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKK 308
AC+ H + D+ AE IL +P D A Y+LLSN+HASA +W+ V+E R+ M+ERN+ K
Sbjct: 528 GACRVHGNMDLGKHAAEMILEQDPHDPAAYILLSNLHASAGQWEEVAEIRKKMKERNLTK 587
Query: 309 EPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEE 368
E G SW+E++N+VH+F +GD SHP++ EI L++L ++K GY+P T +HD++ E+
Sbjct: 588 EAGCSWIEVENKVHKFYVGDTSHPQAQEIYDELDQLALKIKELGYIPSTDFVLHDVEEEQ 647
Query: 369 KEYNLKHHSEKLAIAFA----EHTRGLIVM----------LPFKYISEIKNREIIVRDAS 414
KE L HSEK+A+A+ +R + V FKY S ++ +EI++RDA+
Sbjct: 648 KEQYLFQHSEKIAVAYGFISTSTSRPIRVFKNLRVCGDCHTAFKYFSIVRRKEIVLRDAN 707
Query: 415 RFHHFRNGKCSCGDYW 430
RFHHF++G CSC DYW
Sbjct: 708 RFHHFKDGTCSCNDYW 723
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 146/277 (52%), Gaps = 15/277 (5%)
Query: 2 FELDLVAGSSLAHMYMK-SGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
FE D+ G +L M++K +G L KV MP RNV+ W +I Q G + D +D +
Sbjct: 74 FESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLGFSRDAVDLF 133
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M + G+ PD+ T V+S+C+E+ L G+Q H V+K+G LDV V SL+ MY++C
Sbjct: 134 LDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKC 193
Query: 121 ---GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGE-EAINLFEQMEQKEFEANDVTF 176
G +DD+ K F +V+ W+++I Y G + EAI LF +M Q + + N TF
Sbjct: 194 VADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTF 253
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV----VDLLGRCGYLDEAAALI 232
S+L AC++ G + + L+VK RL CV + + RCG ++ A
Sbjct: 254 SSVLKACANLSDIWLGEQVYALVVKM-----RLASINCVGNSLISMYSRCGNMENARKAF 308
Query: 233 RNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILG 269
++ + N + + T+++A +++ A + EI G
Sbjct: 309 -DVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEG 344
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 152/312 (48%), Gaps = 8/312 (2%)
Query: 1 GFELDLVAGSSLAHMYMK---SGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAE-DV 56
G +LD+ G SL MY K GS+ + KV MP+ NV++W +I G Q+G + +
Sbjct: 175 GLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREA 234
Query: 57 LDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISM 116
++ + M +P+ TF SV+ +C+ L+ + G+Q++A VVK + V +SLISM
Sbjct: 235 IELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISM 294
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
YSRCG ++++ K F ++V +++++ AY EEA LF ++E N TF
Sbjct: 295 YSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTF 354
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
SLL S G KG + ++K K L ++ + RCG + EAA + N
Sbjct: 355 ASLLSGASSIGAIGKGEQIHSRILKS-GFKSNLHICNALISMYSRCGNI-EAAFQVFNEM 412
Query: 237 VKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGV 294
N I W ++++ H A ++L GV+P + +LS +G+
Sbjct: 413 GDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGL 472
Query: 295 SEFREAMRERNV 306
F+ E +
Sbjct: 473 KHFKSMKVEHGI 484
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 106/225 (47%), Gaps = 15/225 (6%)
Query: 35 RNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQI 94
R++++W LI+ A N A + + + M GF P++ F V +CS + G+ I
Sbjct: 5 RDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKII 64
Query: 95 HAEVVKAGA-SLDVGVISSLISMYSRC-GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHG 152
++K G DV V +LI M+ + G L+ + K F +VV W+ MI + G
Sbjct: 65 FGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLG 124
Query: 153 KGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY 212
+A++LF M + + T ++ AC+ GL G +F L++ K L+
Sbjct: 125 FSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVM-----KSGLDLD 179
Query: 213 TCV----VDLLGRC---GYLDEAAALIRNMPVKANAIIWKTLLSA 250
CV VD+ +C G +D+A + MPV N + W +++
Sbjct: 180 VCVGCSLVDMYAKCVADGSVDDARKVFDRMPVH-NVMSWTAIITG 223
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 360 bits (925), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 172/436 (39%), Positives = 277/436 (63%), Gaps = 14/436 (3%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G+SL MY +SG + + K ++ +N++++ ++ G A+N +E+ +N + G
Sbjct: 199 GNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGI 258
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
TF S++S + + +G+G+QIH ++K G + + ++LISMYSRCG ++ + +
Sbjct: 259 GISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQ 318
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F E E +V+ W+SMI + HG A+ +F +M + + N++T+V++L ACSH G+
Sbjct: 319 VFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGM 378
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
+G + F+ M K++ PR+EHY C+VDLLGR G L EA I +MP+ A+A++W+TLL
Sbjct: 379 ISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLL 438
Query: 249 SACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKK 308
AC+ H +T++ AE IL P D A Y+LLSN+HASA +W+ V + R++M+ERN+ K
Sbjct: 439 GACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIK 498
Query: 309 EPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEE 368
E G SW+E++N+VH+F +G+ SHP++ +I L++L S++K GY+PDT +HD++ E+
Sbjct: 499 EAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQ 558
Query: 369 KEYNLKHHSEKLAIAFA----EHTRGLIVM----------LPFKYISEIKNREIIVRDAS 414
KE L HSEK+A+AF ++ + + KYIS REI+VRD++
Sbjct: 559 KEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSN 618
Query: 415 RFHHFRNGKCSCGDYW 430
RFHH +NG CSC DYW
Sbjct: 619 RFHHIKNGVCSCNDYW 634
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 103/179 (57%), Gaps = 4/179 (2%)
Query: 27 KVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELA 86
KV MP RN++ W +I AQ G A D +D + M + G+ PD+ T+ SV+S+C+EL
Sbjct: 11 KVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELG 70
Query: 87 TLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC---GCLDDSVKTFLECEYSDVVLWSS 143
L G+Q+H+ V++ G +LDV V SL+ MY++C G +DDS K F + +V+ W++
Sbjct: 71 LLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTA 130
Query: 144 MIAAYGFHGK-GEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVK 201
+I AY G+ +EAI LF +M N +F S+L AC + G + + VK
Sbjct: 131 IITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVK 189
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 146/313 (46%), Gaps = 10/313 (3%)
Query: 1 GFELDLVAGSSLAHMYMK---SGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAE-DV 56
G LD+ G SL MY K GS+ + KV MP NV++W +I AQ+G + +
Sbjct: 86 GLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEA 145
Query: 57 LDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISM 116
++ + M RP+ +F SV+ +C L+ G+Q+++ VK G + V +SLISM
Sbjct: 146 IELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISM 205
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
Y+R G ++D+ K F ++V +++++ Y + K EEA LF ++ + TF
Sbjct: 206 YARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTF 265
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVK-KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM 235
SLL + G KG + ++K Y+ + ++ + RCG ++ A + M
Sbjct: 266 ASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCI--CNALISMYSRCGNIEAAFQVFNEM 323
Query: 236 PVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQG 293
+ N I W ++++ H A + ++L G P + +LS +G
Sbjct: 324 EDR-NVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEG 382
Query: 294 VSEFREAMRERNV 306
F +E +
Sbjct: 383 QKHFNSMYKEHGI 395
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 360 bits (925), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 172/436 (39%), Positives = 277/436 (63%), Gaps = 14/436 (3%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G+SL MY +SG + + K ++ +N++++ ++ G A+N +E+ +N + G
Sbjct: 194 GNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGI 253
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
TF S++S + + +G+G+QIH ++K G + + ++LISMYSRCG ++ + +
Sbjct: 254 GISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQ 313
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F E E +V+ W+SMI + HG A+ +F +M + + N++T+V++L ACSH G+
Sbjct: 314 VFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGM 373
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
+G + F+ M K++ PR+EHY C+VDLLGR G L EA I +MP+ A+A++W+TLL
Sbjct: 374 ISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLL 433
Query: 249 SACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKK 308
AC+ H +T++ AE IL P D A Y+LLSN+HASA +W+ V + R++M+ERN+ K
Sbjct: 434 GACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIK 493
Query: 309 EPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEE 368
E G SW+E++N+VH+F +G+ SHP++ +I L++L S++K GY+PDT +HD++ E+
Sbjct: 494 EAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQ 553
Query: 369 KEYNLKHHSEKLAIAFA----EHTRGLIVM----------LPFKYISEIKNREIIVRDAS 414
KE L HSEK+A+AF ++ + + KYIS REI+VRD++
Sbjct: 554 KEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSN 613
Query: 415 RFHHFRNGKCSCGDYW 430
RFHH +NG CSC DYW
Sbjct: 614 RFHHIKNGVCSCNDYW 629
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 103/179 (57%), Gaps = 4/179 (2%)
Query: 27 KVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELA 86
KV MP RN++ W +I AQ G A D +D + M + G+ PD+ T+ SV+S+C+EL
Sbjct: 6 KVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELG 65
Query: 87 TLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC---GCLDDSVKTFLECEYSDVVLWSS 143
L G+Q+H+ V++ G +LDV V SL+ MY++C G +DDS K F + +V+ W++
Sbjct: 66 LLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTA 125
Query: 144 MIAAYGFHGK-GEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVK 201
+I AY G+ +EAI LF +M N +F S+L AC + G + + VK
Sbjct: 126 IITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVK 184
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 146/313 (46%), Gaps = 10/313 (3%)
Query: 1 GFELDLVAGSSLAHMYMK---SGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAE-DV 56
G LD+ G SL MY K GS+ + KV MP NV++W +I AQ+G + +
Sbjct: 81 GLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEA 140
Query: 57 LDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISM 116
++ + M RP+ +F SV+ +C L+ G+Q+++ VK G + V +SLISM
Sbjct: 141 IELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISM 200
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
Y+R G ++D+ K F ++V +++++ Y + K EEA LF ++ + TF
Sbjct: 201 YARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTF 260
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVK-KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM 235
SLL + G KG + ++K Y+ + ++ + RCG ++ A + M
Sbjct: 261 ASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCI--CNALISMYSRCGNIEAAFQVFNEM 318
Query: 236 PVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQG 293
+ N I W ++++ H A + ++L G P + +LS +G
Sbjct: 319 EDR-NVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEG 377
Query: 294 VSEFREAMRERNV 306
F +E +
Sbjct: 378 QKHFNSMYKEHGI 390
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 360 bits (925), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 181/442 (40%), Positives = 273/442 (61%), Gaps = 25/442 (5%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G++L+ Y K G E K+ L+ ++++AW +++G AQ G E + + + G
Sbjct: 430 GTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGV 489
Query: 69 RPDKITFVSVISSCS-ELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV 127
P++ TF SV+++C+ A++ QG+Q H+ +K+G S + V S+L++MY++ G ++ +
Sbjct: 490 EPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESAN 549
Query: 128 KTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCG 187
+ F D+V W+SMI+ Y HG G++++ +FE+M K E + +TF+ ++ AC+H G
Sbjct: 550 EVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAG 609
Query: 188 LKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTL 247
L +G +FDLMVK Y P +EHY+C+VDL R G L++A LI MP A A IW+TL
Sbjct: 610 LVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTL 669
Query: 248 LSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVK 307
L+AC+ H + + AE+++ + PQD+A YVLLSNI+A+A WQ ++ R+ M + VK
Sbjct: 670 LAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVK 729
Query: 308 KEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSE 367
KE G SW+E+KN+ F GD SHP+S I L LEEL+ +K GY PDT +HD++ E
Sbjct: 730 KEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDAGYYPDTKYVLHDVEEE 789
Query: 368 EKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREI 408
KE L HSE+LAIAF GLI P K IS+I+ R+I
Sbjct: 790 HKEVILSQHSERLAIAF-----GLIATPPGTPIQIVKNLRVCGDCHTVIKLISKIEGRDI 844
Query: 409 IVRDASRFHHFRNGKCSCGDYW 430
+VRD++RFHHF+ G CSCGDYW
Sbjct: 845 VVRDSNRFHHFKGGSCSCGDYW 866
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 138/271 (50%), Gaps = 23/271 (8%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D+ G+SL MYMK+ S+ +GE+V M ++NV++W +L+AG QNGL E L +
Sbjct: 122 GFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLF 181
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M++ G +P+ TF +V+ + + +G Q+H V+K+G + V +S+++MYS+
Sbjct: 182 SQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKS 241
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
+ D+ F E + V W+SMIA + +G EA LF +M + + F +++
Sbjct: 242 LMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVI 301
Query: 181 YACS-----------HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAA 229
C+ HC + + G + FDL +K T ++ +C +D+A
Sbjct: 302 KLCANIKEMSFAKQLHCQVIKNGSD-FDLNIK-----------TALMVAYSKCSEIDDAF 349
Query: 230 ALIRNMPVKANAIIWKTLLSACKTHKSTDMA 260
L M N + W ++S + TD A
Sbjct: 350 KLFCMMHGVQNVVSWTAIISGYVQNGRTDRA 380
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 136/277 (49%), Gaps = 16/277 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLM-PIRNVIAWITLIAGKAQNGLAEDVLDQ 59
G + DL ++L Y K + + K+ +M ++NV++W +I+G QNG + ++
Sbjct: 324 GSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNL 383
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ MR G RP+ T+ +++++ + ++ QIHA VVK V ++L YS+
Sbjct: 384 FCQMRREGVRPNHFTYSTILTANAAVSP----SQIHALVVKTNYENSPSVGTALSDSYSK 439
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G +++ K F + D+V WS+M++ Y G E A+ +F Q+ ++ E N+ TF S+
Sbjct: 440 IGDANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSV 499
Query: 180 LYACSH-CGLKEKGMEFFDLMVKKYRRKPRLEHYTCV----VDLLGRCGYLDEAAALIRN 234
L AC+ E+G +F +K + CV V + + G ++ A + +
Sbjct: 500 LNACAAPTASVEQGKQFHSCSIKS-----GFSNALCVSSALVTMYAKRGNIESANEVFKR 554
Query: 235 MPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVN 271
V + + W +++S H + +I EE+ N
Sbjct: 555 Q-VDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKN 590
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 106/207 (51%), Gaps = 2/207 (0%)
Query: 48 AQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDV 107
++N ++ L+ + +R G D + V+ C L G+Q+H + +K G DV
Sbjct: 68 SRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKCGFVEDV 127
Query: 108 GVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQK 167
V +SL+ MY + ++D + F E +VV W+S++A Y +G E+A+ LF QM+ +
Sbjct: 128 SVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLE 187
Query: 168 EFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDE 227
+ N TF ++L + G EKG++ +++K + +V++ + + +
Sbjct: 188 GIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNS-MVNMYSKSLMVSD 246
Query: 228 AAALIRNMPVKANAIIWKTLLSACKTH 254
A A+ +M + NA+ W ++++ T+
Sbjct: 247 AKAVFDSMENR-NAVSWNSMIAGFVTN 272
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 80/158 (50%), Gaps = 12/158 (7%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF L S+L MY K G++ +V + R++++W ++I+G AQ+G + L +
Sbjct: 524 GFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIF 583
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVI------SSLI 114
MR D ITF+ VIS+C+ + +GQ+ +VK D ++ S ++
Sbjct: 584 EEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVK-----DYHIVPTMEHYSCMV 638
Query: 115 SMYSRCGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFH 151
+YSR G L+ ++ + + + +W +++AA H
Sbjct: 639 DLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVH 676
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 360 bits (924), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 172/436 (39%), Positives = 277/436 (63%), Gaps = 14/436 (3%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G+SL MY +SG + + K ++ +N++++ ++ G A+N +E+ +N + G
Sbjct: 374 GNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGI 433
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
TF S++S + + +G+G+QIH ++K G + + ++LISMYSRCG ++ + +
Sbjct: 434 GISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQ 493
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F E E +V+ W+SMI + HG A+ +F +M + + N++T+V++L ACSH G+
Sbjct: 494 VFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGM 553
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
+G + F+ M K++ PR+EHY C+VDLLGR G L EA I +MP+ A+A++W+TLL
Sbjct: 554 ISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLL 613
Query: 249 SACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKK 308
AC+ H +T++ AE IL P D A Y+LLSN+HASA +W+ V + R++M+ERN+ K
Sbjct: 614 GACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIK 673
Query: 309 EPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEE 368
E G SW+E++N+VH+F +G+ SHP++ +I L++L S++K GY+PDT +HD++ E+
Sbjct: 674 EAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQ 733
Query: 369 KEYNLKHHSEKLAIAFA----EHTRGLIVM----------LPFKYISEIKNREIIVRDAS 414
KE L HSEK+A+AF ++ + + KYIS REI+VRD++
Sbjct: 734 KEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSN 793
Query: 415 RFHHFRNGKCSCGDYW 430
RFHH +NG CSC DYW
Sbjct: 794 RFHHIKNGVCSCNDYW 809
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 87/255 (34%), Positives = 132/255 (51%), Gaps = 18/255 (7%)
Query: 2 FELDLVAGSSLAHMYMK-SGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
E D+ G L M++K SG L KV MP RN++ W +I AQ G A D +D +
Sbjct: 160 LEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLF 219
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M + G+ PD+ T+ SV+S+C+EL L G+Q+H+ V++ G +LDV V SL+ MY++C
Sbjct: 220 LDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKC 279
Query: 121 ---GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGE-EAINLFEQMEQKEFEANDVTF 176
G +DDS K F + +V+ W+++I AY G+ + EAI LF +M N +F
Sbjct: 280 AADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSF 339
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV----VDLLGRCGYLDEAAA-- 230
S+L AC + G + V Y K + CV + + R G +++A
Sbjct: 340 SSVLKACGNLSDPYTGEQ-----VYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAF 394
Query: 231 --LIRNMPVKANAII 243
L V NAI+
Sbjct: 395 DILFEKNLVSYNAIV 409
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 145/313 (46%), Gaps = 10/313 (3%)
Query: 1 GFELDLVAGSSLAHMYMK---SGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAE-DV 56
G LD+ G SL MY K GS+ + KV MP NV++W +I Q+G + +
Sbjct: 261 GLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEA 320
Query: 57 LDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISM 116
++ + M RP+ +F SV+ +C L+ G+Q+++ VK G + V +SLISM
Sbjct: 321 IELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISM 380
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
Y+R G ++D+ K F ++V +++++ Y + K EEA LF ++ + TF
Sbjct: 381 YARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTF 440
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVK-KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM 235
SLL + G KG + ++K Y+ + ++ + RCG ++ A + M
Sbjct: 441 ASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCI--CNALISMYSRCGNIEAAFQVFNEM 498
Query: 236 PVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQG 293
+ N I W ++++ H A + ++L G P + +LS +G
Sbjct: 499 EDR-NVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEG 557
Query: 294 VSEFREAMRERNV 306
F +E +
Sbjct: 558 QKHFNSMYKEHGI 570
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 122/260 (46%), Gaps = 16/260 (6%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLM-PIRNVIAWITLIAGKAQNGLAEDVLDQ 59
G ELD V ++L +Y K G + M R++++W +++ A N + +
Sbjct: 56 GLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWT 115
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAG-ASLDVGVISSLISMYS 118
+ M +GF P++ F +VI +CS G+ I+ VVK G DV V LI M+
Sbjct: 116 FLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFV 175
Query: 119 R-CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
+ G L + K F + ++V W+ MI + G +AI+LF ME + + T+
Sbjct: 176 KGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYS 235
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV----VDLLGRC---GYLDEAAA 230
S+L AC+ GL G + ++ + L CV VD+ +C G +D++
Sbjct: 236 SVLSACTELGLLALGKQLHSRVI-----RLGLALDVCVGCSLVDMYAKCAADGSVDDSRK 290
Query: 231 LIRNMPVKANAIIWKTLLSA 250
+ MP + N + W +++A
Sbjct: 291 VFEQMP-EHNVMSWTAIITA 309
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 93/195 (47%), Gaps = 11/195 (5%)
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+LM PD T+ ++ SC G+ +H +++++G LD V+++LIS+YS+C
Sbjct: 15 DLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKC 74
Query: 121 GCLDDSVKTFLEC-EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G + + F D+V WS+M++ + + +AI F M + F N+ F ++
Sbjct: 75 GDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAV 134
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV----VDLLGR-CGYLDEAAALIRN 234
+ ACS+ G + +VK LE CV +D+ + G L A +
Sbjct: 135 IRACSNANYAWVGEIIYGFVVK----TGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDK 190
Query: 235 MPVKANAIIWKTLLS 249
MP + N + W +++
Sbjct: 191 MPER-NLVTWTLMIT 204
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 360 bits (924), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 184/443 (41%), Positives = 278/443 (62%), Gaps = 25/443 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+V G++L +MY K G + V +P ++ I+W TL+ G QNGLA + +D YN+M
Sbjct: 358 DVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMME 417
Query: 65 MV-GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
P++ T+VS+I + S + L QG +IHA+++K LDV V + LI +Y +CG L
Sbjct: 418 ECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRL 477
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
+D++ F E V W+++IA+ G HG+GEEA+ LF+ M + +A+ +TFVSLL AC
Sbjct: 478 EDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSAC 537
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
SH GL ++G + FD+M K+Y KP L+HY C+VDLLGR GYL++A L+RNMP++ +A I
Sbjct: 538 SHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASI 597
Query: 244 WKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
W LLSACK + + ++ ++ +L V+ ++ YVLLSNI+A+ ++W+GV + R R+
Sbjct: 598 WGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARD 657
Query: 304 RNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHD 363
R ++K PG S + + ++ F G+++HP+ EI L+ L+++MK GYVPD D
Sbjct: 658 RGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSLGYVPDYSFVYQD 717
Query: 364 MDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIK 404
++ +EKE L HSE+LAIAF G+I P KYIS I
Sbjct: 718 IEEDEKEQILNSHSERLAIAF-----GIISTPPRSPIRIFKNLRVCGDCHNATKYISRIS 772
Query: 405 NREIIVRDASRFHHFRNGKCSCG 427
REI+VRD++RFHHF++G CSC
Sbjct: 773 EREIVVRDSNRFHHFKDGICSCA 795
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 126/250 (50%), Gaps = 1/250 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE D+ +SL H+Y + G L KV MP+++V +W +I+G QNG A L
Sbjct: 151 GFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVL 210
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
N M+ G + D IT S++ C++ + G IH V+K G DV V ++LI+MYS+
Sbjct: 211 NRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKF 270
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L D+ F + E D+V W+S+IAAY + A+ F+ M+ + +T VSL
Sbjct: 271 GRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLT 330
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
S + ++++ + +V++ + GY++ A + +P K +
Sbjct: 331 SIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRK-D 389
Query: 241 AIIWKTLLSA 250
I W TL++
Sbjct: 390 TISWNTLVTG 399
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 141/292 (48%), Gaps = 12/292 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G ++V + L ++Y+ G + + +N+ +W ++I+ + G + ++
Sbjct: 49 GKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCV 108
Query: 61 N-LMRMVG---FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISM 116
N L M G RPD TF ++ +C +L G+++H V K G DV V +SL+ +
Sbjct: 109 NQLFSMCGGGHLRPDFYTFPPILKAC---VSLVDGKKVHCCVFKMGFEDDVFVAASLVHL 165
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
YSR G LD + K F++ DV W++MI+ + +G A+ + +M+ + + + +T
Sbjct: 166 YSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITV 225
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
S+L C+ G+ L V K+ + ++++ + G L +A + M
Sbjct: 226 ASILPVCAQSDDVINGV-LIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQME 284
Query: 237 VKANAIIWKTLLSACKTHKSTDMAGRIAE--EILGVNPQDAAPYVLLSNIHA 286
V+ + + W ++++A + + A R + ++ G+ P D V L++I +
Sbjct: 285 VR-DLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRP-DLLTVVSLTSIFS 334
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 83/188 (44%), Gaps = 28/188 (14%)
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
F ++ +SC + +++HA ++ G S ++ + + LI++Y G + S TF
Sbjct: 25 FNALFNSC---VNVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIH 81
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAIN----LFEQMEQKEFEANDVTFVSLLYAC------- 183
++ W+S+I+AY GK EA+N LF + TF +L AC
Sbjct: 82 KKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVDGK 141
Query: 184 -SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
HC + + G E D+ V +V L R G LD A + +MPVK +
Sbjct: 142 KVHCCVFKMGFE-DDVFVA-----------ASLVHLYSRYGVLDVAHKVFVDMPVK-DVG 188
Query: 243 IWKTLLSA 250
W ++S
Sbjct: 189 SWNAMISG 196
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 68/154 (44%), Gaps = 2/154 (1%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
LD+ + L +Y K G L + + +P + W +IA +G E+ L + M
Sbjct: 459 LDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDM 518
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSRCGC 122
+ D ITFVS++S+CS + +GQ+ + K G + ++ + R G
Sbjct: 519 LAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGY 578
Query: 123 LDDSVKTFLECEYS-DVVLWSSMIAAYGFHGKGE 155
L+ + + D +W ++++A +G E
Sbjct: 579 LEKAYELVRNMPIQPDASIWGALLSACKIYGNAE 612
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 360 bits (924), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 176/445 (39%), Positives = 269/445 (60%), Gaps = 24/445 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
++ S+L MY K ++ E V + M +NV++W ++ G QNG +E+ + ++ M+
Sbjct: 309 NIFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQ 368
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G PD T SVISSC+ LA+L +G Q HA + +G + V ++L+++Y +CG ++
Sbjct: 369 KYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIE 428
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
DS + F E + D V W+++++ Y GK E I LFE M + + VTF+ +L ACS
Sbjct: 429 DSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACS 488
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
GL EKG + F+ M+ ++ P +HYTC++DL R G ++EA I MP +AI W
Sbjct: 489 RAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISW 548
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
TLLS+C+ + + D+ AE ++ ++P + A YVLLS+++A+ +W+ V+ R+ MR++
Sbjct: 549 ATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDK 608
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
++KEPG SW++ KNQVH F+ DKS+P S +I LE+L +M GYVPD + +HD+
Sbjct: 609 GLRKEPGCSWIKYKNQVHVFSADDKSNPFSDQIYSELEKLNYKMIKEGYVPDMNSVLHDV 668
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKN 405
EK L HHSEKLAIAF GL+ + P KYIS+I N
Sbjct: 669 GDSEKIKMLNHHSEKLAIAF-----GLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITN 723
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
REI+VRD +RFH F++G CSCGD+W
Sbjct: 724 REILVRDTARFHLFKDGTCSCGDFW 748
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 150/306 (49%), Gaps = 4/306 (1%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E ++V ++L M+ G + + +++ M R+ I+W ++I G QNGL D +D +
Sbjct: 206 EKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFRE 265
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M++ + D+ TF SV+++C + L +G+Q+HA +++ ++ V S+L+ MY +C
Sbjct: 266 MKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKN 325
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
+ + F + +VV W++M+ YG +G EEA+ F M++ E +D T S++ +
Sbjct: 326 IKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISS 385
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
C++ E+G +F + + +V L G+CG ++++ L + K + +
Sbjct: 386 CANLASLEEGAQFHARALTS-GLISFITVSNALVTLYGKCGSIEDSHRLFNEISFK-DEV 443
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
W L+S + + E +L G+ P +LS + +G F
Sbjct: 444 TWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESM 503
Query: 301 MRERNV 306
+ E +
Sbjct: 504 INEHGI 509
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 140/305 (45%), Gaps = 37/305 (12%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
+L + +++ Y K G + E E + MP R+ ++W +LI+G A GL + YNLM
Sbjct: 74 NLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLML 133
Query: 65 MV--GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS---- 118
F ++ITF +++ S+ + G+QIH VVK G V V S L+ MYS
Sbjct: 134 KNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGM 193
Query: 119 ---------------------------RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFH 151
RCG ++DS + F E D + W+SMI + +
Sbjct: 194 ISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQN 253
Query: 152 GKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEH 211
G +AI++F +M+ + + + TF S+L AC ++G + +++ K +
Sbjct: 254 GLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRT-DYKDNIFV 312
Query: 212 YTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEI--LG 269
+ +VD+ +C + A A+ + M K N + W +L + ++ A + ++ G
Sbjct: 313 ASALVDMYCKCKNIKSAEAVFKKMTCK-NVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYG 371
Query: 270 VNPQD 274
+ P D
Sbjct: 372 IEPDD 376
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 71/127 (55%), Gaps = 4/127 (3%)
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
+ +++ C E + + +H+ ++K + ++++LIS Y++ G + + K F +
Sbjct: 12 YCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMP 71
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGME 194
+ ++ W+++++AY G+ E LF+ M +++ V++ SL+ + CGL + ++
Sbjct: 72 HPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRD----GVSWNSLISGYAGCGLIYQSVK 127
Query: 195 FFDLMVK 201
++LM+K
Sbjct: 128 AYNLMLK 134
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 360 bits (924), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 172/436 (39%), Positives = 277/436 (63%), Gaps = 14/436 (3%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G+SL MY +SG + + K ++ +N++++ ++ G A+N +E+ +N + G
Sbjct: 392 GNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGI 451
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
TF S++S + + +G+G+QIH ++K G + + ++LISMYSRCG ++ + +
Sbjct: 452 GISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQ 511
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F E E +V+ W+SMI + HG A+ +F +M + + N++T+V++L ACSH G+
Sbjct: 512 VFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGM 571
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
+G + F+ M K++ PR+EHY C+VDLLGR G L EA I +MP+ A+A++W+TLL
Sbjct: 572 ISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLL 631
Query: 249 SACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKK 308
AC+ H +T++ AE IL P D A Y+LLSN+HASA +W+ V + R++M+ERN+ K
Sbjct: 632 GACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIK 691
Query: 309 EPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEE 368
E G SW+E++N+VH+F +G+ SHP++ +I L++L S++K GY+PDT +HD++ E+
Sbjct: 692 EAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQ 751
Query: 369 KEYNLKHHSEKLAIAFA----EHTRGLIVM----------LPFKYISEIKNREIIVRDAS 414
KE L HSEK+A+AF ++ + + KYIS REI+VRD++
Sbjct: 752 KEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSN 811
Query: 415 RFHHFRNGKCSCGDYW 430
RFHH +NG CSC DYW
Sbjct: 812 RFHHIKNGVCSCNDYW 827
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/205 (37%), Positives = 115/205 (56%), Gaps = 5/205 (2%)
Query: 2 FELDLVAGSSLAHMYMK-SGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
E D+ G L M++K SG L KV MP RN++ W +I AQ G A D +D +
Sbjct: 178 LEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLF 237
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M + G+ PD+ T+ SV+S+C+EL L G+Q+H+ V++ G +LDV V SL+ MY++C
Sbjct: 238 LDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKC 297
Query: 121 ---GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGK-GEEAINLFEQMEQKEFEANDVTF 176
G +DDS K F + +V+ W+++I AY G+ +EAI LF +M N +F
Sbjct: 298 AADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSF 357
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVK 201
S+L AC + G + + VK
Sbjct: 358 SSVLKACGNLSDPYTGEQVYSYAVK 382
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 145/313 (46%), Gaps = 10/313 (3%)
Query: 1 GFELDLVAGSSLAHMYMK---SGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAE-DV 56
G LD+ G SL MY K GS+ + KV MP NV++W +I Q+G + +
Sbjct: 279 GLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEA 338
Query: 57 LDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISM 116
++ + M RP+ +F SV+ +C L+ G+Q+++ VK G + V +SLISM
Sbjct: 339 IELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISM 398
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
Y+R G ++D+ K F ++V +++++ Y + K EEA LF ++ + TF
Sbjct: 399 YARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTF 458
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVK-KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM 235
SLL + G KG + ++K Y+ + ++ + RCG ++ A + M
Sbjct: 459 ASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCI--CNALISMYSRCGNIEAAFQVFNEM 516
Query: 236 PVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQG 293
+ N I W ++++ H A + ++L G P + +LS +G
Sbjct: 517 EDR-NVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEG 575
Query: 294 VSEFREAMRERNV 306
F +E +
Sbjct: 576 QKHFNSMYKEHGI 588
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 122/260 (46%), Gaps = 16/260 (6%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLM-PIRNVIAWITLIAGKAQNGLAEDVLDQ 59
G ELD V ++L +Y K G + M R++++W +++ A N + +
Sbjct: 74 GLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWT 133
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAG-ASLDVGVISSLISMYS 118
+ M +GF P++ F +VI +CS G+ I+ VVK G DV V LI M+
Sbjct: 134 FLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFV 193
Query: 119 R-CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
+ G L + K F + ++V W+ MI + G +AI+LF ME + + T+
Sbjct: 194 KGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYS 253
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV----VDLLGRC---GYLDEAAA 230
S+L AC+ GL G + +++ L CV VD+ +C G +D++
Sbjct: 254 SVLSACTELGLLALGKQLHSRVIRL-----GLALDVCVGCSLVDMYAKCAADGSVDDSRK 308
Query: 231 LIRNMPVKANAIIWKTLLSA 250
+ MP + N + W +++A
Sbjct: 309 VFEQMP-EHNVMSWTAIITA 327
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 93/195 (47%), Gaps = 11/195 (5%)
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+LM PD T+ ++ SC G+ +H +++++G LD V+++LIS+YS+C
Sbjct: 33 DLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKC 92
Query: 121 GCLDDSVKTFLEC-EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G + + F D+V WS+M++ + + +AI F M + F N+ F ++
Sbjct: 93 GDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAV 152
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV----VDLLGR-CGYLDEAAALIRN 234
+ ACS+ G + +VK LE CV +D+ + G L A +
Sbjct: 153 IRACSNANYAWVGEIIYGFVVK----TGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDK 208
Query: 235 MPVKANAIIWKTLLS 249
MP + N + W +++
Sbjct: 209 MPER-NLVTWTLMIT 222
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 360 bits (924), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 179/449 (39%), Positives = 276/449 (61%), Gaps = 24/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ ++ GS+L MY K S+ E V + M +NV++W ++ G QNG +E+ + +
Sbjct: 300 GYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVF 359
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G PD T SVISSC+ LA+L +G Q H + + +G + V ++LI++Y +C
Sbjct: 360 CDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKC 419
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++DS + F E + D V W+++++ Y GK E I+LFE+M + + + VTF+++L
Sbjct: 420 GSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVL 479
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACS GL E+G ++F+ M+K + P +HYTC++DL GR G L+EA I MP +
Sbjct: 480 SACSRAGLVERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPD 539
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+I W TLLS+C+ + + ++ AE +L ++PQ+ A Y+LLS+I+A+ +W V++ R
Sbjct: 540 SIGWATLLSSCRLYGNEEIGKWAAESLLELDPQNPAGYILLSSIYAAKGKWSNVAQLRRG 599
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
MRE+ +KEPG SW++ K++V+ F+ D+S P S +I LE+L +M GYVPD +
Sbjct: 600 MREKGARKEPGFSWIKYKSKVYIFSADDQSSPFSDQIYAELEKLNHKMIEEGYVPDASSV 659
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVM---LPF----------------KYIS 401
+HD++ EK L HHSEKLAIAF GL+ + LP KYIS
Sbjct: 660 LHDVEDSEKMKMLNHHSEKLAIAF-----GLLFIPHGLPIRVVKNLRVCGDCHNATKYIS 714
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+I REI+VRDA RFH F++G CSCGD+W
Sbjct: 715 KISQREILVRDAVRFHLFKDGTCSCGDFW 743
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 159/309 (51%), Gaps = 10/309 (3%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E ++V +++ ++SG + + +++ M R+ I+W T+I G QNGL + +D +
Sbjct: 201 ERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRD 260
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
MR G D+ TF SV+++C L L +G++IH ++++G + +V V S+L+ MY +C
Sbjct: 261 MRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRS 320
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
+ + F +VV W++M+ YG +G EEA+ +F M++ E +D T S++ +
Sbjct: 321 VRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISS 380
Query: 183 CSHCGLKEKGMEFF-DLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
C++ E+G +F +V + + ++ L G+CG ++++ L M + +
Sbjct: 381 CANLASLEEGAQFHCQALVSGLISFITVSN--ALITLYGKCGSIEDSNQLFDEMSFR-DE 437
Query: 242 IIWKTLLSA----CKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEF 297
+ W L+S K +++ D+ R+ + G+ P +LS + +G F
Sbjct: 438 VSWTALVSGYAQFGKANETIDLFERML--VQGLKPDAVTFIAVLSACSRAGLVERGQQYF 495
Query: 298 REAMRERNV 306
+++ +
Sbjct: 496 ESMLKDHGI 504
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 139/300 (46%), Gaps = 38/300 (12%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVG-F 68
+++ Y KSG L +++ +MP R+ ++W +LI+G G + + YN M G
Sbjct: 75 NTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVL 134
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
++ITF +++ S + G+QIH ++VK G V V SSL+ MY++ G + + +
Sbjct: 135 NLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQ 194
Query: 129 TFLECEYSDVVLWSSMIAAY-----------GFHGKGE--------------------EA 157
F E + +VV++++MI FHG E EA
Sbjct: 195 VFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEA 254
Query: 158 INLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKK-YRRKPRLEHYTCVV 216
++LF M Q+ + TF S+L AC ++G E L+++ Y + + +V
Sbjct: 255 MDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVG--SALV 312
Query: 217 DLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQD 274
D+ +C + A A+ + M K N + W +L + ++ A R+ ++ G+ P D
Sbjct: 313 DMYCKCRSVRYAEAVFKRMANK-NVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDD 371
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 360 bits (924), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 181/449 (40%), Positives = 264/449 (58%), Gaps = 24/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF + L ++L MY K G + + M ++V+ W +I+ AQ + +
Sbjct: 262 GFGMSLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLF 321
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
MR G RP+++T VS++S C+ L G+ HA + K G +DV + ++LI MY++C
Sbjct: 322 VQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKC 381
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + + F E D+ W+ M+A YG HG GE+A+ LF +ME + ND+TF+ L
Sbjct: 382 GDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGAL 441
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
+ACSH GL +G F+ M+ + P++EHY C+VDLLGR G LDEA +I +MPV N
Sbjct: 442 HACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPN 501
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
IW +L+ACK HK+++M A E+L + PQ+ VL+SNI+A+A RW V+ R+A
Sbjct: 502 IAIWGAMLAACKIHKNSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVAGMRKA 561
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
+++ +KKEPG+S +E+ VH F MGD +HP +I L E++ ++K GY+PDT
Sbjct: 562 VKDTGIKKEPGMSSIEVNGLVHDFKMGDTAHPLIEKISEMLAEMSKKLKEAGYLPDTSVV 621
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
+H++D EEKE L +HSEKLA+AF GLI P K +S
Sbjct: 622 LHNIDEEEKETALNYHSEKLAMAF-----GLISTAPGTPIRVVKNLRICDDCHTVTKLLS 676
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+I R IIVRD +RFHHFR G CSCG YW
Sbjct: 677 KIYKRVIIVRDRNRFHHFREGSCSCGGYW 705
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 140/298 (46%), Gaps = 26/298 (8%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAW-------ITLIAGKAQNGLA 53
G D+ ++L MY + GSLV + M R+V++W ITL G +Q +
Sbjct: 139 GLVSDVFVVNALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIV 198
Query: 54 ------------EDVLDQYNL-MRMV--GFRPDKITFVSVISSCSELATLGQGQQIHAEV 98
D+ + L +RM+ P+ IT +S+I SC + + G+++HA +
Sbjct: 199 SWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYI 258
Query: 99 VKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAI 158
++ G + + + ++L+ MY +CG + + F + DV+ W++MI+AY + A
Sbjct: 259 LRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAF 318
Query: 159 NLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDL 218
LF QM N++T VSLL C+ G + G ++F + K + + T ++D+
Sbjct: 319 QLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMG-KWFHAYIDKQGVEVDVILKTALIDM 377
Query: 219 LGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQD 274
+CG + A L + + W +++ H + A ++ E+ LGV P D
Sbjct: 378 YAKCGDISGAQRLFSE-AIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPND 434
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 115/250 (46%), Gaps = 26/250 (10%)
Query: 57 LDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISM 116
L+ Y MR + D SV+ +CS+++ G++IH VK G DV V+++L+ M
Sbjct: 94 LNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQM 153
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAA-----YGFHGKG----------------- 154
YS CG L + F + DVV WS+MI A YGF +
Sbjct: 154 YSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDL 213
Query: 155 EEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC 214
EE LF +M ++ ND+T +SL+ +C G + G +++ L T
Sbjct: 214 EEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRN-GFGMSLALATA 272
Query: 215 VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNP 272
+VD+ G+CG + A A+ +M K + + W ++SA D A ++ ++ GV P
Sbjct: 273 LVDMYGKCGEIRSARAIFDSMKNK-DVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRP 331
Query: 273 QDAAPYVLLS 282
+ LLS
Sbjct: 332 NELTMVSLLS 341
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 360 bits (923), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 172/441 (39%), Positives = 274/441 (62%), Gaps = 14/441 (3%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
LD+V+ +S+ Y+KSG + K+ MP +N++ W +I+G A+N + ++ Y L+
Sbjct: 177 LDVVSWTSMVAGYIKSGDVTSARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLL 236
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
+ G ++ VSVI+SC+ L L G++ H +++ ++++ + ++L+ MY+RCG +
Sbjct: 237 QSEGVHANETVMVSVIASCAHLGALELGERAHDYILRNKMTVNLILGTALVDMYARCGSI 296
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
D ++ F + D + W+++IA + HG E+A+ F +ME+ ++TF ++L AC
Sbjct: 297 DKAIWVFDQLPGRDALSWTTLIAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSAC 356
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
SH GL E+G+E F+ M + YR +PRLEHY C+VDLLGR G L EA + MP+K NA I
Sbjct: 357 SHGGLVERGLELFESMKRDYRIEPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPI 416
Query: 244 WKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
W LL AC+ HK++++A R + ++ + P+ + YVLLSNI+A +W+ V R+ M+E
Sbjct: 417 WGALLGACRIHKNSEIAERAGKTLIELKPEHSGYYVLLSNIYARTNKWENVENIRQMMKE 476
Query: 304 RNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHD 363
R V K PG + E+ +VH+FT+GDK+HP +I+ EE+ +++L GY + + D
Sbjct: 477 RGVVKPPGYTLFEMDGKVHKFTIGDKTHPEIQQIERMWEEILGKIRLAGYTGNNDDALFD 536
Query: 364 MDSEEKEYNLKHHSEKLAIAFA-EHTRG-----LIVML--------PFKYISEIKNREII 409
+D EEKE N+ HSEKLAIA+A T+G ++ L K IS++ RE+I
Sbjct: 537 IDEEEKESNIHRHSEKLAIAYAIMRTKGHDPIRIVKNLRVCEDCHTATKLISKVYERELI 596
Query: 410 VRDASRFHHFRNGKCSCGDYW 430
VRD +RFHHF+ G CSC DYW
Sbjct: 597 VRDRNRFHHFKGGACSCMDYW 617
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 150/342 (43%), Gaps = 41/342 (11%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
D+ A S L + + L +V + N+ + + I G + + + Y
Sbjct: 45 FDVFAASCLISISINKNLLDYAAQVFYQIQNPNLFIYNSFIRGFSGSKDPDKSFHFYVQS 104
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
+ G PD +T+ ++ +C++ +L G Q H ++++ G DV V +SL++MYS G +
Sbjct: 105 KRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQIIRHGFDSDVYVQNSLVTMYSTLGDI 164
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEF-------------- 169
+ F DVV W+SM+A Y G A LF++M +K
Sbjct: 165 KSASYVFRRISCLDVVSWTSMVAGYIKSGDVTSARKLFDKMPEKNLVTWSVMISGYAKNS 224
Query: 170 -----------------EANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY 212
AN+ VS++ +C+H G E G D +++ + L
Sbjct: 225 FFDKAIELYFLLQSEGVHANETVMVSVIASCAHLGALELGERAHDYILRN-KMTVNLILG 283
Query: 213 TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH----KSTDMAGRIAEEIL 268
T +VD+ RCG +D+A + +P + +A+ W TL++ H K+ + R+ E
Sbjct: 284 TALVDMYARCGSIDKAIWVFDQLPGR-DALSWTTLIAGFAMHGYAEKALEYFSRM--EKA 340
Query: 269 GVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEP 310
G+ P++ +LS +G+ F E+M+ R+ + EP
Sbjct: 341 GLTPREITFTAVLSACSHGGLVERGLELF-ESMK-RDYRIEP 380
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 69/133 (51%), Gaps = 6/133 (4%)
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
++R + + K++F + SC+ L+ L + IHA +++A DV S LIS+
Sbjct: 8 VLRKLELKNPKLSF---LESCTTLSHL---KIIHAHLIRAHTIFDVFAASCLISISINKN 61
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
LD + + F + + ++ +++S I + +++ + + Q ++ +++T+ L+
Sbjct: 62 LLDYAAQVFYQIQNPNLFIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVK 121
Query: 182 ACSHCGLKEKGME 194
AC+ G + G++
Sbjct: 122 ACTQKGSLDMGIQ 134
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 179/434 (41%), Positives = 269/434 (61%), Gaps = 25/434 (5%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y + G++ + + + MP R+ I+W +I+G AQ+G +E+ L + M+ G ++
Sbjct: 349 YAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSAL 408
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
+SSC+E+A L G+Q+H +VKAG ++L++MY +CG ++++ F +
Sbjct: 409 ACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITE 468
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
D+V W++MIA Y HG G+EA+ LFE M+ + +DVT V +L ACSH G +KGME+
Sbjct: 469 KDIVSWNTMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTGFVDKGMEY 527
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK 255
F+ M + Y +HYTC++DLLGR G LDEA L+++MP +A W LL A + H
Sbjct: 528 FNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHG 587
Query: 256 STDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWL 315
T++ + AE++ + P ++ YVLLSN++A++ RW+ V E R MR++ VKK PG SW+
Sbjct: 588 DTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWV 647
Query: 316 EIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKH 375
EI+N+ H FT+GD SHP + I YLEEL E+K G+V T +HD++ EEKE+ LK+
Sbjct: 648 EIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKY 707
Query: 376 HSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREIIVRDASRF 416
HSEKLA+AF G++ + P K+IS+I R+IIVRD++RF
Sbjct: 708 HSEKLAVAF-----GILSIPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRF 762
Query: 417 HHFRNGKCSCGDYW 430
HHF G CSCGDYW
Sbjct: 763 HHFSEGSCSCGDYW 776
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 129/270 (47%), Gaps = 15/270 (5%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y ++G L E ++ +PIR+V AW +++G QNG+ ++ + M P+K
Sbjct: 256 YAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEM------PEK--- 306
Query: 76 VSVISSCSELATLGQGQQIHA--EVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLEC 133
+ +S + +A Q QQI E+ S + +++++ Y++CG +D + F E
Sbjct: 307 -NEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEM 365
Query: 134 EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGM 193
D + W++MI+ Y G+ EEA++LF +M++ N L +C+ E G
Sbjct: 366 PQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGK 425
Query: 194 EFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKT 253
+ +VK + + ++ + G+CG ++EA + ++ K + + W T+++
Sbjct: 426 QLHGRLVKAGFQTGYIAG-NALLAMYGKCGSIEEAFDVFEDITEK-DIVSWNTMIAGYAR 483
Query: 254 HKSTDMAGRIAEEI-LGVNPQDAAPYVLLS 282
H A + E + + + P D +LS
Sbjct: 484 HGFGKEALALFESMKMTIKPDDVTLVGVLS 513
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 97/191 (50%), Gaps = 12/191 (6%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ +AG++L MY K GS+ E V + +++++W T+IAG A++G ++ L +
Sbjct: 435 GFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALF 494
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSR 119
M+M +PD +T V V+S+CS + +G + + + G + + + +I + R
Sbjct: 495 ESMKMT-IKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGR 553
Query: 120 CGCLDDSVKTFLECE-YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEA---NDVT 175
G LD+++ Y D W +++ A HG E L E+ +K FE N
Sbjct: 554 AGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTE----LGEKAAEKVFEMEPDNSGM 609
Query: 176 FVSL--LYACS 184
+V L LYA S
Sbjct: 610 YVLLSNLYAAS 620
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 125/273 (45%), Gaps = 41/273 (15%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
DL++ + + Y+K+G+L + MP ++V++W +++G AQNG E+ ++ M
Sbjct: 121 DLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQML 180
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHA-----EVVKAGASL-------------- 105
+ ++I++ ++S+ + + +++ E+V +
Sbjct: 181 V----KNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARS 236
Query: 106 --------DVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEA 157
D + +I+ Y++ G L ++ + F E DV W++M++ + +G +EA
Sbjct: 237 LFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEA 296
Query: 158 INLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVD 217
+FE+M +K N+V++ +++ EK E FD M + + +V
Sbjct: 297 TRIFEEMPEK----NEVSWNAMIAGYVQSQQIEKARELFDQMPSR-----NTSSWNTMVT 347
Query: 218 LLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+CG +D+A L MP + + I W ++S
Sbjct: 348 GYAQCGNIDQAKILFDEMPQR-DCISWAAMISG 379
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 105/264 (39%), Gaps = 51/264 (19%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+V + YM+ G V M R+ + + +I+G N ++++ R
Sbjct: 59 DIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSN-------NKFDCAR 111
Query: 65 MVGFR-PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
V + PD+ D+ + ++S Y + G L
Sbjct: 112 KVFEKMPDR---------------------------------DLISWNVMLSGYVKNGNL 138
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
+ F + DVV W++M++ + +G EEA +F+QM K N++++ LL A
Sbjct: 139 SAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVK----NEISWNGLLSAY 194
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
G E FD + + + C++ R LD+A +L MPV+ + I
Sbjct: 195 VQNGRIEDARRLFD-----SKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVR-DKIS 248
Query: 244 WKTLLSACKTHKSTDMAGRIAEEI 267
W +++ + A R+ EE+
Sbjct: 249 WNIMITGYAQNGLLSEARRLFEEL 272
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 67/140 (47%), Gaps = 18/140 (12%)
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL--YACSHCGLKEKGM 193
SD+V W+ I+AY G+ E A+++F M ++ + VT+ +++ Y ++
Sbjct: 58 SDIVKWNRKISAYMRKGQCESALSVFNGMRRR----STVTYNAMISGYLSNNK------- 106
Query: 194 EFFDLMVKKYRRKPRLEHYTCVVDLLG--RCGYLDEAAALIRNMPVKANAIIWKTLLSAC 251
FD K + + P + + V L G + G L A AL MP K + + W +LS
Sbjct: 107 --FDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEK-DVVSWNAMLSGF 163
Query: 252 KTHKSTDMAGRIAEEILGVN 271
+ + A +I +++L N
Sbjct: 164 AQNGFVEEARKIFDQMLVKN 183
>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 595
Score = 359 bits (921), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 181/445 (40%), Positives = 273/445 (61%), Gaps = 15/445 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF + +SL H+Y G + KV MP ++++AW ++I G A+NG E+ L Y
Sbjct: 151 GFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALY 210
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M + G +PD T VS++S+C+++ L G++ H ++K G + ++ + L+ +Y+RC
Sbjct: 211 TEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTRNLHSSNVLLDLYARC 270
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE-FEANDVTFVSL 179
G ++++ F E + V W+S+I +G G+EAI LF+ ME KE ++TFV +
Sbjct: 271 GRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNMESKEGLLPCEITFVGI 330
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
LYACSHCG+ ++G E+F M ++Y+ +PR+EH+ C+VDLL R G + +A I MP++
Sbjct: 331 LYACSHCGMVKEGFEYFRRMSEEYKIEPRIEHFGCMVDLLARAGQVKKAYEYILKMPMQP 390
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
N +IW+TLL AC H +D+A +IL + P + YVLLSN++AS +RW V + R+
Sbjct: 391 NVVIWRTLLGACTVHGDSDLAELARMKILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRK 450
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M V+K PG S +E+ N+VH+F MGDKSHP++ I L+E+T ++L GYVP
Sbjct: 451 QMLRDGVRKVPGHSLVEVGNRVHEFLMGDKSHPQNDMIYAKLKEMTDRLRLEGYVPQISN 510
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFA----------EHTRGLIVM----LPFKYISEIKN 405
D++ EEKE L +HSEK+AIAF + L V L K +S++ N
Sbjct: 511 VYVDVEEEEKENALVYHSEKIAIAFMLISTPERWPIRVVKNLKVCADCHLAIKLVSKVYN 570
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
REI+VRD SRFHHF+NG CSC DYW
Sbjct: 571 REIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 117/217 (53%), Gaps = 4/217 (1%)
Query: 33 PIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF-RPDKITFVSVISSCSELATLGQG 91
PI NV W TLI G A+ G + + Y MR GF PD T+ ++ + ++A + G
Sbjct: 82 PI-NVFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAVGKMADVRLG 140
Query: 92 QQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFH 151
+ IH+ V+++G + V +SL+ +Y+ CG + + K F + D+V W+S+I + +
Sbjct: 141 ETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAEN 200
Query: 152 GKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEH 211
GK EEA+ L+ +M+ K + + T VSLL AC+ G G F M+K + L
Sbjct: 201 GKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTR-NLHS 259
Query: 212 YTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
++DL RCG ++EA L M V N++ W +L+
Sbjct: 260 SNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLI 295
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 184/452 (40%), Positives = 278/452 (61%), Gaps = 27/452 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLM-PIRNVIAWITLIAGKAQNGLAEDVLDQ 59
G + DL ++L Y K + + K+ +M ++NV++W +I+G QNG + ++
Sbjct: 324 GSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNL 383
Query: 60 YNLMRMV-GFRPDKITFVSVISSCS-ELATLGQGQQIHAEVVKAGASLDVGVISSLISMY 117
+ MR G P++ TF SV+++C+ A++ QG+Q H+ +K+G S + V S+L++MY
Sbjct: 384 FCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMY 443
Query: 118 SRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
++ G ++ + + F D+V W+SMI+ Y HG G++++ +FE+M K E + +TF+
Sbjct: 444 AKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFI 503
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
++ AC+H GL +G +FDLMVK Y P +EHY+C+VDL R G L++A LI MP
Sbjct: 504 GVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPF 563
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEF 297
A A IW+TLL+AC+ H + + AE+++ + PQD+A YVLLSNI+A+A WQ ++
Sbjct: 564 PAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKV 623
Query: 298 REAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDT 357
R+ M + VKKE G SW+E+KN+ F GD SHP+S I L LEEL+ +K GY PDT
Sbjct: 624 RKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDAGYYPDT 683
Query: 358 GADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FK 398
+HD++ E KE L HSE+LAIAF GLI P K
Sbjct: 684 KYVLHDVEEEHKEVILSQHSERLAIAF-----GLIATPPGTPIQIVKNLRVCGDCHTVIK 738
Query: 399 YISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
IS+I+ R+I+VRD++RFHHF+ G CSCGDYW
Sbjct: 739 LISKIEGRDIVVRDSNRFHHFKGGSCSCGDYW 770
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 138/271 (50%), Gaps = 23/271 (8%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D+ G+SL MYMK+ S+ +GE+V M ++NV++W +L+AG QNGL E L +
Sbjct: 122 GFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLF 181
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M++ G +P+ TF +V+ + + +G Q+H V+K+G + V +S+++MYS+
Sbjct: 182 SQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKS 241
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
+ D+ F E + V W+SMIA + +G EA LF +M + + F +++
Sbjct: 242 LMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVI 301
Query: 181 YACS-----------HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAA 229
C+ HC + + G + FDL +K T ++ +C +D+A
Sbjct: 302 KLCANIKEMSFAKQLHCQVIKNGSD-FDLNIK-----------TALMVAYSKCSEIDDAF 349
Query: 230 ALIRNMPVKANAIIWKTLLSACKTHKSTDMA 260
L M N + W ++S + TD A
Sbjct: 350 KLFCMMHGVQNVVSWTAIISGYVQNGRTDRA 380
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 106/207 (51%), Gaps = 2/207 (0%)
Query: 48 AQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDV 107
++N ++ L+ + +R G D + V+ C L G+Q+H + +K G DV
Sbjct: 68 SRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKCGFVEDV 127
Query: 108 GVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQK 167
V +SL+ MY + ++D + F E +VV W+S++A Y +G E+A+ LF QM+ +
Sbjct: 128 SVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLE 187
Query: 168 EFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDE 227
+ N TF ++L + G EKG++ +++K + +V++ + + +
Sbjct: 188 GIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNS-MVNMYSKSLMVSD 246
Query: 228 AAALIRNMPVKANAIIWKTLLSACKTH 254
A A+ +M + NA+ W ++++ T+
Sbjct: 247 AKAVFDSMENR-NAVSWNSMIAGFVTN 272
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 181/449 (40%), Positives = 268/449 (59%), Gaps = 24/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE D +SL Y K G + + +V PI +++ + +L+ AQ+G E+ L Y
Sbjct: 343 GFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLY 402
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G +PD S++++C+ L+ QG+Q+H ++K G D+ +SL++MY++C
Sbjct: 403 LEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKC 462
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++D+ F +V WS+MI HG G+EA+ LF+QM + N +T VS+L
Sbjct: 463 GSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVL 522
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+H GL + +F+ M + +P EHY C++DLLGR G L+ A L+ MP +AN
Sbjct: 523 CACNHAGLVAEAKHYFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQAN 582
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A++W LL A + HK+ D+ + AE +L + P+ + +VLL+NI+AS W V+ R
Sbjct: 583 ALVWGALLGAARIHKNIDLGEQAAEMLLALEPEKSGTHVLLANIYASVGMWDKVARVRRL 642
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M++ VKKEPG+SWLE+K++V+ F +GD+SH RS EI L+EL+ +K GYVP D
Sbjct: 643 MKDGKVKKEPGMSWLEVKDKVYTFIVGDRSHSRSTEIYAKLDELSDLLKKAGYVPMVEID 702
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
+HD++ EKE L HHSEKLA+AF GLI P K+IS
Sbjct: 703 LHDVERSEKEQLLYHHSEKLAVAF-----GLIATPPGAPIRVKKNLRICFDCHTVLKFIS 757
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+I +REIIVRD +RFHHFR G CSCG+YW
Sbjct: 758 KIVSREIIVRDTNRFHHFREGSCSCGEYW 786
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 141/271 (52%), Gaps = 4/271 (1%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D G L MY K S+ + V +LMP R++IAW +I+G +QN E+ + LM
Sbjct: 246 DSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMH 305
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G ++ T +V+ S + L +QIHA +K+G D V++SLI Y +CG ++
Sbjct: 306 TEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVE 365
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D+ + F E D+VL++S++ AY G+GEEA+ L+ +M+ + + + SLL AC+
Sbjct: 366 DATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACA 425
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
E+G + + + K+ + +V++ +CG +++A+ +PV+ + W
Sbjct: 426 SLSAYEQGKQ-VHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRG-IVSW 483
Query: 245 KTLLSACKTHKSTDMAGRIAEEIL--GVNPQ 273
++ H A ++ +++L GV P
Sbjct: 484 SAMIGGLAQHGYGKEALQLFKQMLKVGVPPN 514
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 122/250 (48%), Gaps = 2/250 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ D +SL +Y K G + + +P R+V++W L + + + + + +
Sbjct: 40 GFDSDEFVANSLVILYAKCGGFGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLF 99
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M + G RP++ + S+I+ C+ L QG++IH ++K G D ++L+ MY++
Sbjct: 100 HDMVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKV 159
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L+D+ F E D+V W+++IA H A+ L +M + N T S L
Sbjct: 160 GILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSAL 219
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+ L+E G + ++K ++D+ +C +D+A + + MP + +
Sbjct: 220 KACAGMALRELGRQLHSSLIKMDMGSDSFLGVG-LIDMYSKCNSMDDARLVFKLMPER-D 277
Query: 241 AIIWKTLLSA 250
I W ++S
Sbjct: 278 MIAWNAVISG 287
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 138/306 (45%), Gaps = 26/306 (8%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G++ D + ++L MY K G L + V + ++++W +IAG + L+
Sbjct: 141 GYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELL 200
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G P+ T S + +C+ +A G+Q+H+ ++K D + LI MYS+C
Sbjct: 201 REMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKC 260
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
+DD+ F D++ W+++I+ + + + EEA +LF M + N T ++L
Sbjct: 261 NSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVL 320
Query: 181 ---------YACS--HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAA 229
Y C H + G EF + +V ++D G+CG++++A
Sbjct: 321 KSIAALQANYMCRQIHALSLKSGFEFDNYVVNS------------LIDTYGKCGHVEDAT 368
Query: 230 ALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHAS 287
+ P+ + +++ +L++A + A R+ E+ G+ P LL+ +
Sbjct: 369 RVFEESPI-VDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASL 427
Query: 288 AKRWQG 293
+ QG
Sbjct: 428 SAYEQG 433
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 91/193 (47%), Gaps = 2/193 (1%)
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M ++G + ++ F SV+ +C+ L G+Q+H VV G D V +SL+ +Y++CG
Sbjct: 1 MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGG 60
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
D+ F VV W+++ + Y EA++LF M N+ + S++
Sbjct: 61 FGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINV 120
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
C+ +G + ++K +VD+ + G L++A+++ + K + +
Sbjct: 121 CTGLEDSVQGRKIHGYLIKLGYDSDAFS-ANALVDMYAKVGILEDASSVFDEI-AKPDIV 178
Query: 243 IWKTLLSACKTHK 255
W +++ C H+
Sbjct: 179 SWNAIIAGCVLHE 191
>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 595
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 180/445 (40%), Positives = 274/445 (61%), Gaps = 15/445 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF + +SL H+Y G + KV MP ++++AW ++I G A+NG E+ L Y
Sbjct: 151 GFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALY 210
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G +PD T VS++S+C+++ L G+++H ++K G + ++ + L+ +Y+RC
Sbjct: 211 TEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARC 270
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE-FEANDVTFVSL 179
G ++++ F E + V W+S+I +G G+EAI LF+ ME E ++TFV +
Sbjct: 271 GRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGI 330
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
LYACSHCG+ ++G E+F M ++Y+ +PR+EH+ C+VDLL R G + +A I++MP++
Sbjct: 331 LYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQP 390
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
N +IW+TLL AC H +D+A +IL + P + YVLLSN++AS +RW V + R+
Sbjct: 391 NVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRK 450
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M VKK PG S +E+ N+VH+F MGDKSHP+S I L+E+T ++ GYVP
Sbjct: 451 QMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISN 510
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAF---AEHTRGLIVM-----------LPFKYISEIKN 405
D++ EEKE + +HSEK+AIAF + R I + L K +S++ N
Sbjct: 511 VYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYN 570
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
REI+VRD SRFHHF+NG CSC DYW
Sbjct: 571 REIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 114/217 (52%), Gaps = 4/217 (1%)
Query: 33 PIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF-RPDKITFVSVISSCSELATLGQG 91
PI NV W TLI G A+ G + Y MR+ G PD T+ +I + + +A + G
Sbjct: 82 PI-NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLG 140
Query: 92 QQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFH 151
+ IH+ V+++G + V +SL+ +Y+ CG + + K F + D+V W+S+I + +
Sbjct: 141 ETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAEN 200
Query: 152 GKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEH 211
GK EEA+ L+ +M K + + T VSLL AC+ G G M+K + L
Sbjct: 201 GKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTR-NLHS 259
Query: 212 YTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
++DL RCG ++EA L M V N++ W +L+
Sbjct: 260 SNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLI 295
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 358 bits (920), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 180/449 (40%), Positives = 278/449 (61%), Gaps = 24/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF +SL MY +SG + + K ++ +N+I++ T+I A+N +E+ L+ +
Sbjct: 406 GFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELF 465
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
N + G TF S++S + + T+G+G+QIHA V+K+G L+ V ++LISMYSRC
Sbjct: 466 NEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRC 525
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ + + F + E +V+ W+S+I + HG +A+ LF +M ++ N VT++++L
Sbjct: 526 GNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVL 585
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL +G + F M ++ PR+EHY C+VD+LGR G L EA I +MP KA+
Sbjct: 586 SACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFINSMPYKAD 645
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A++W+T L AC+ H + ++ A+ I+ P D A Y+LLSN++AS +W VS R+A
Sbjct: 646 ALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASTSKWDEVSNIRKA 705
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+E+N+ KE G SW+E++N+VH+F +GD SHP++ EI L+ L+ ++K GYVP+
Sbjct: 706 MKEKNLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIKKLGYVPNLDFV 765
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIV---MLP----------------FKYIS 401
+HD++ E+KE L HSEK+A+AF GLI M P KYIS
Sbjct: 766 LHDVEEEQKEKLLFQHSEKIAVAF-----GLISTSKMKPIRVFKNLRICGDCHSAIKYIS 820
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
REIIVRDA+RFHH ++G+CSC +YW
Sbjct: 821 MATGREIIVRDANRFHHIKDGRCSCNEYW 849
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 145/314 (46%), Gaps = 12/314 (3%)
Query: 1 GFELDLVAGSSLAHMYMK---SGSLVEGEKVIRLMPIRNVIAWITLIAGKAQ-NGLAEDV 56
G LD G L +MY K GS+ K+ + NV +W +I G Q G E+
Sbjct: 301 GLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEA 360
Query: 57 LDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISM 116
LD + M + P+ TF S + +C+ LA L G+Q+ VK G S V +SLISM
Sbjct: 361 LDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISM 420
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
Y+R G +DD+ K F +++ ++++I AY + EEA+ LF ++E + A+ TF
Sbjct: 421 YARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTF 480
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC--VVDLLGRCGYLDEAAALIRN 234
SLL + G KG + ++K +L C ++ + RCG ++ A + +
Sbjct: 481 ASLLSGAASIGTIGKGEQIHARVIKS---GLKLNQSVCNALISMYSRCGNIESAFQVFED 537
Query: 235 MPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQ 292
M + N I W ++++ H A + ++L GV P +LS +
Sbjct: 538 MEDR-NVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNE 596
Query: 293 GVSEFREAMRERNV 306
G F+ E V
Sbjct: 597 GWKHFKSMYTEHGV 610
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 131/272 (48%), Gaps = 15/272 (5%)
Query: 5 DLVAGSSLAHMYMKS-GSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
D+ G L M++K G LV KV MP RN + W +I Q G A + +D + M
Sbjct: 203 DVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEM 262
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC--- 120
+ G+ PD+ T VIS+C+ + L GQQ+H++ ++ G +LD V LI+MY++C
Sbjct: 263 ILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVD 322
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGK-GEEAINLFEQMEQKEFEANDVTFVSL 179
G + + K F + +V W++MI Y G EEA++LF M N TF S
Sbjct: 323 GSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSST 382
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV----VDLLGRCGYLDEAAALIRNM 235
L AC++ G + F V K CV + + R G +D+A ++
Sbjct: 383 LKACANLAALRIGEQVFTHAV-----KLGFSSVNCVANSLISMYARSGRIDDARKAF-DI 436
Query: 236 PVKANAIIWKTLLSACKTHKSTDMAGRIAEEI 267
+ N I + T++ A + +++ A + EI
Sbjct: 437 LFEKNLISYNTVIDAYAKNLNSEEALELFNEI 468
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 110/254 (43%), Gaps = 6/254 (2%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLM-PIRNVIAWITLIAGKAQNGLAEDVLDQY 60
+LD V +SL +Y K G + + +LM R++I+W +++ A N + L +
Sbjct: 97 LQLDSVTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTF 156
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAG-ASLDVGVISSLISMYSR 119
M G+ P++ F + +CS + G I VVK G DV V LI M+ +
Sbjct: 157 VDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVK 216
Query: 120 C-GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
G L + K F + + V W+ MI G EAI+LF +M +E + T
Sbjct: 217 GRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSG 276
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDE--AAALIRNMP 236
++ AC++ L G + ++ R C++++ +C AA I +
Sbjct: 277 VISACANMELLLLGQQLHSQAIRHGLTLDRCVG-CCLINMYAKCSVDGSMCAARKIFDQI 335
Query: 237 VKANAIIWKTLLSA 250
+ N W +++
Sbjct: 336 LDHNVFSWTAMITG 349
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 90/208 (43%), Gaps = 13/208 (6%)
Query: 49 QNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVG 108
NG + M G PD T+ + C + G +H ++ ++ LD
Sbjct: 43 NNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSV 102
Query: 109 VISSLISMYSRCGCLDDSVKTF-LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQK 167
++SLIS+YS+CG + + F L D++ WS+M++ + + G A+ F M +
Sbjct: 103 TLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIEN 162
Query: 168 EFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV----VDLL--GR 221
+ N+ F + ACS G F +VK L+ CV +D+ GR
Sbjct: 163 GYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVK----TGYLQSDVCVGCGLIDMFVKGR 218
Query: 222 CGYLDEAAALIRNMPVKANAIIWKTLLS 249
G L A + MP + NA+ W +++
Sbjct: 219 -GDLVSAFKVFEKMPER-NAVTWTLMIT 244
>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 773
Score = 358 bits (920), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 176/444 (39%), Positives = 269/444 (60%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + ++ SSL MY K +V+ +V L+ R+ I+W ++IAG QNGL ++ L +
Sbjct: 330 GLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGLKFF 389
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M M +P +F S++ +C+ L TL G+Q+H + + G ++ + SSL+ MY++C
Sbjct: 390 RQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKC 449
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + + F D+V W++MI HG +AI LFEQM+ + E N V F+++L
Sbjct: 450 GNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMAVL 509
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL ++ ++F+ M + P +EHY V DLLGR G L+EA I MP+
Sbjct: 510 TACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMPIGPT 569
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+W TLLSAC+ HK+ DMA ++A IL V+P++ Y+LL+NI+++A+RW+ +++R +
Sbjct: 570 GSVWATLLSACRVHKNVDMAEKVANRILEVDPKNTGAYILLANIYSAARRWKEAAKWRAS 629
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
+R ++K P SW+E++N+V+ F GD+SHP +I +E L M+ GYVPDT
Sbjct: 630 LRRTGIRKTPACSWIEVRNKVYAFMAGDESHPCYEKIREAMEVLMELMEKEGYVPDTSEV 689
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA----------EHTRGLIVM----LPFKYISEIKNR 406
HD++ E+K+Y + HSE+LAI F T+ L V K+IS+I R
Sbjct: 690 HHDVEEEQKKYLVCSHSERLAIVFGIINTPAGTTIRVTKNLRVCTDCHTATKFISKIVGR 749
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EI+VRD SRFHHF+NG CSCGDYW
Sbjct: 750 EIVVRDNSRFHHFKNGTCSCGDYW 773
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 126/258 (48%), Gaps = 4/258 (1%)
Query: 27 KVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELA 86
K+ +MP +++++W T+IAG A+NGL + L M +PD T SV+ +E
Sbjct: 255 KIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAENV 314
Query: 87 TLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIA 146
+ +G++IH ++ G +V V SSLI MY++C + DS + F D + W+S+IA
Sbjct: 315 DISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIA 374
Query: 147 AYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRK 206
+G +E + F QM + + +F S++ AC+H G + + + +
Sbjct: 375 GCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDE 434
Query: 207 PRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEE 266
+ + +VD+ +CG + A + M ++ + + W ++ C H A + E+
Sbjct: 435 -NIFIASSLVDMYAKCGNIRTARQIFDRMRLR-DMVSWTAMIMGCALHGHALDAIELFEQ 492
Query: 267 IL--GVNPQDAAPYVLLS 282
+ G+ P A +L+
Sbjct: 493 MKTEGIEPNYVAFMAVLT 510
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 60/143 (41%), Gaps = 9/143 (6%)
Query: 38 IAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAE 97
+AW ++I +GL L + M G PD F SV+ +C+ L L G+ +H
Sbjct: 74 LAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLMDLNLGESLHGY 133
Query: 98 VVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLEC---------EYSDVVLWSSMIAAY 148
+++ G D+ ++L++MYS+ L S + L V S ++
Sbjct: 134 IIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGASQVLDEMTERTRSVRTASVLVGNQ 193
Query: 149 GFHGKGEEAINLFEQMEQKEFEA 171
G EA N +EFEA
Sbjct: 194 GRKVSDIEAFNYDVSCRSREFEA 216
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 1/108 (0%)
Query: 77 SVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYS 136
S++ + + + Q QQ+HA+V+K AS +S L+S+YS L DS++ F +
Sbjct: 13 SLLRNPLSIKSRSQAQQLHAQVLKFQASSLC-NLSLLLSIYSHINLLHDSLRLFNTLHFP 71
Query: 137 DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ W S+I Y HG +++ F M + F S+L AC+
Sbjct: 72 PALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACA 119
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 358 bits (920), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 179/449 (39%), Positives = 267/449 (59%), Gaps = 24/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + D+ GSSL MY KS + + E+V + R+ I+W +L+AG QNG + L +
Sbjct: 272 GIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLF 331
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M +P + F SVI +C+ LATL G+Q+H V++ G ++ + S+L+ MYS+C
Sbjct: 332 RQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKC 391
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + K F D V W+++I + HG G EA++LFE+M+++ + N V FV++L
Sbjct: 392 GNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVL 451
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL ++ +F+ M K Y LEHY V DLLGR G L+EA I M V+
Sbjct: 452 TACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPT 511
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+W TLLS+C HK+ ++A ++AE+I V+ ++ YVL+ N++AS RW+ +++ R
Sbjct: 512 GSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLR 571
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
MR++ ++K+P SW+E+KN+ H F GD+SHP +I+ +L+ + +M+ GYV DT
Sbjct: 572 MRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGV 631
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
+HD+D E K L HSE+LA+AF G+I P K+IS
Sbjct: 632 LHDVDEEHKRELLFGHSERLAVAF-----GIINTEPGTTIRVTKNIRICTDCHVAIKFIS 686
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+I REIIVRD SRFHHF G CSCGDYW
Sbjct: 687 KITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 129/258 (50%), Gaps = 4/258 (1%)
Query: 27 KVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELA 86
+V +MP ++V+++ T+IAG AQ+G+ ED L M +PD T SV+ SE
Sbjct: 197 RVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYV 256
Query: 87 TLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIA 146
+ +G++IH V++ G DV + SSL+ MY++ ++DS + F D + W+S++A
Sbjct: 257 DVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVA 316
Query: 147 AYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRK 206
Y +G+ EA+ LF QM + + V F S++ AC+H G + +++
Sbjct: 317 GYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRG-GFG 375
Query: 207 PRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEE 266
+ + +VD+ +CG + A + M V + + W ++ H A + EE
Sbjct: 376 SNIFIASALVDMYSKCGNIKAARKIFDRMNV-LDEVSWTAIIMGHALHGHGHEAVSLFEE 434
Query: 267 I--LGVNPQDAAPYVLLS 282
+ GV P A +L+
Sbjct: 435 MKRQGVKPNQVAFVAVLT 452
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 144/396 (36%), Gaps = 92/396 (23%)
Query: 37 VIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHA 96
V+AW ++I L L + MR G PD F SV+ SC+ + L G+ +H
Sbjct: 70 VLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHG 129
Query: 97 EVVKAGASLDVGVISSLISMYSRC-------------------------------GCL-- 123
+V+ G D+ ++L++MY++ C+
Sbjct: 130 FIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMP 189
Query: 124 --DDSVKTFLEC-EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
DSV+ E DVV ++++IA Y G E+A+ + +M + + + T S+L
Sbjct: 190 FGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVL 249
Query: 181 YACSHCGLKEKGMEFFDLMVKK---------------YRRKPRLE--------------- 210
S KG E +++K Y + R+E
Sbjct: 250 PIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGI 309
Query: 211 HYTCVVDLLGRCGYLDEAAALIRNM---PVKANAIIWKTLLSAC----KTHKSTDMAGRI 263
+ +V + G +EA L R M VK A+ + +++ AC H + G +
Sbjct: 310 SWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYV 369
Query: 264 AEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQ 323
G N A+ V + + + + R+ NV E VSW I
Sbjct: 370 LRGGFGSNIFIASALVDMYS------KCGNIKAARKIFDRMNVLDE--VSWTAI------ 415
Query: 324 FTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
MG H E E EMK +G P+ A
Sbjct: 416 -IMGHALHGHGHEAVSLFE----EMKRQGVKPNQVA 446
>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Cucumis sativus]
Length = 609
Score = 358 bits (920), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 184/444 (41%), Positives = 267/444 (60%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ +SL HMY GSL +V +M R+ +AW ++I G A NG+ + L Y
Sbjct: 166 GFDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLY 225
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G PD T VS++S+C EL L G+++H +VK G + ++L+ +YS+C
Sbjct: 226 REMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKC 285
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G D+ K F E E VV W+S+I +G G EA+ LF ++E++ + +++TFV +L
Sbjct: 286 GNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVL 345
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
YACSHCG+ ++G +F M ++Y PR+EH+ C+VDLL R G + +A IRNMPV N
Sbjct: 346 YACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPN 405
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A+IW+TLL AC H ++ EI + + + +VLLSN++AS +RW V R+
Sbjct: 406 AVIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASERRWLDVQNVRKI 465
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M + VKK PG S +E+KN+V++F MGD+SHP+S E L ++T +K+ GYVP T
Sbjct: 466 MLMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQLLKIEGYVPRTVNV 525
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAF----AEHTRGLIVM----------LPFKYISEIKNR 406
+ D++ EEKE L HH+EK+AIAF + +M L K IS++ R
Sbjct: 526 LADIEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRVCADCHLAIKLISKVFER 585
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EIIVRD SRFHHF++G CSC DYW
Sbjct: 586 EIIVRDRSRFHHFKDGSCSCKDYW 609
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 3/214 (1%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVG-FRPDKITFVSVISSCSELATLGQGQQI 94
N+ W T+I G A++ ++ ++ M PD TF + + ++L + G+ I
Sbjct: 99 NIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGI 158
Query: 95 HAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKG 154
H+ VV+ G V +SL+ MYS G L + + F Y D V W+S+I + +G
Sbjct: 159 HSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVINGFALNGMP 218
Query: 155 EEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC 214
EA+ L+ +M + E + T VSLL AC G G MVK + +
Sbjct: 219 NEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQ-HASNA 277
Query: 215 VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
++DL +CG +A + M ++ + W +L+
Sbjct: 278 LLDLYSKCGNFRDAQKVFDEMEERS-VVSWTSLI 310
>gi|356529924|ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 694
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 177/450 (39%), Positives = 268/450 (59%), Gaps = 26/450 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D GS L MY K G ++ V + RNV+ W L+ QNG E+ L+ +
Sbjct: 251 GLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWTALMTAYLQNGYFEESLNLF 310
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G P++ TF ++++C+ +A L G +HA V K G V V ++LI+MYS+
Sbjct: 311 TCMDREGTLPNEYTFAVLLNACAGIAALRHGDLLHARVEKLGFKNHVIVRNALINMYSKS 370
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +D S F + Y D++ W++MI Y HG G++A+ +F+ M E N VTF+ +L
Sbjct: 371 GSIDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQVFQDMVSAEECPNYVTFIGVL 430
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
A SH GL ++G + + +++ ++ +P LEHYTC+V LL R G LDEA ++ VK +
Sbjct: 431 SAYSHLGLVKEGFYYLNHLMRNFKIEPGLEHYTCMVALLSRAGLLDEAENFMKTTQVKWD 490
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+ W+TLL+AC H++ D+ RIAE +L ++P D Y LLSN++A A+RW GV R+
Sbjct: 491 VVAWRTLLNACHVHRNYDLGRRIAESVLQMDPHDVGTYTLLSNMYAKARRWDGVVTIRKL 550
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
MRERN+KKEPG SWL+I+N +H F +HP S++I +++L + +K GYVP+ +
Sbjct: 551 MRERNIKKEPGASWLDIRNDIHVFLSEGSNHPESIQIYKKVQQLLALIKPLGYVPNIASV 610
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP--------------------FKYI 400
+HD++ E+KE L +HSEKLA+A+ ++ +P K I
Sbjct: 611 LHDVEDEQKEGYLSYHSEKLALAYG------LMKIPSPAPIRIIKNLRMCDDCHTAVKLI 664
Query: 401 SEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
S++ NR IIVRDA+RFHHFR+G C+C D+W
Sbjct: 665 SKVTNRLIIVRDANRFHHFRDGSCTCLDHW 694
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 152/310 (49%), Gaps = 13/310 (4%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMP---IRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV 66
S+L HMY + + +V+ +P + ++ ++ +++ ++G E+ ++ L RMV
Sbjct: 156 SALVHMYSRCSHVELALQVLDTVPGEHVNDIFSYNSVLNALVESGRGEEAVEV--LRRMV 213
Query: 67 G--FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
D +T+V V+ C+++ L G ++HA +++ G D V S LI MY +CG +
Sbjct: 214 DECVAWDHVTYVGVMGLCAQIRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVL 273
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
++ F + +VV+W++++ AY +G EE++NLF M+++ N+ TF LL AC+
Sbjct: 274 NARNVFDGLQNRNVVVWTALMTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACA 333
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
G + V+K K + ++++ + G +D + + +M + + I W
Sbjct: 334 GIAALRHG-DLLHARVEKLGFKNHVIVRNALINMYSKSGSIDSSYNVFTDM-IYRDIITW 391
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRE- 303
++ H A ++ +++ V+ ++ YV + ++ V E +
Sbjct: 392 NAMICGYSHHGLGKQALQVFQDM--VSAEECPNYVTFIGVLSAYSHLGLVKEGFYYLNHL 449
Query: 304 -RNVKKEPGV 312
RN K EPG+
Sbjct: 450 MRNFKIEPGL 459
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 125/247 (50%), Gaps = 10/247 (4%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY-NLMRMVGF 68
+SL H+Y+K G L + MP+RNV++W L+AG G +VL + N++ +
Sbjct: 54 NSLVHLYVKCGQLGLARNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNA 113
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
P++ F + +S+CS + +G Q H + K G V S+L+ MYSRC ++ +++
Sbjct: 114 CPNEYVFTTALSACSHGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQ 173
Query: 129 TFLEC---EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
+D+ ++S++ A G+GEEA+ + +M + + VT+V ++ C+
Sbjct: 174 VLDTVPGEHVNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQ 233
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHY--TCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
+ G+ + + R + + + ++D+ G+CG + A + + + N ++
Sbjct: 234 IRDLQLGLR---VHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNR-NVVV 289
Query: 244 WKTLLSA 250
W L++A
Sbjct: 290 WTALMTA 296
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 84/179 (46%), Gaps = 17/179 (9%)
Query: 68 FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLD---VGVISSLISMYSRCGCLD 124
+ P ++ C+++ L G+ +HA+ + + + + ++SL+ +Y +CG L
Sbjct: 8 YLPSLEELGKLLKLCADVKWLPFGKAMHAQFLIRNQTSNHSHISHLNSLVHLYVKCGQLG 67
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEA-NDVTFVSLLYAC 183
+ F +VV W+ ++A Y G E + LF+ M + N+ F + L AC
Sbjct: 68 LARNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNACPNEYVFTTALSAC 127
Query: 184 SHCGLKEKGMEF------FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
SH G ++GM+ F L+ +Y + + +V + RC +++ A ++ +P
Sbjct: 128 SHGGRVKEGMQCHGLLFKFGLVCHQYVK-------SALVHMYSRCSHVELALQVLDTVP 179
>gi|145333540|ref|NP_001078415.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658995|gb|AEE84395.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 462
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 180/445 (40%), Positives = 274/445 (61%), Gaps = 15/445 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF + +SL H+Y G + KV MP ++++AW ++I G A+NG E+ L Y
Sbjct: 18 GFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALY 77
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G +PD T VS++S+C+++ L G+++H ++K G + ++ + L+ +Y+RC
Sbjct: 78 TEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARC 137
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE-FEANDVTFVSL 179
G ++++ F E + V W+S+I +G G+EAI LF+ ME E ++TFV +
Sbjct: 138 GRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGI 197
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
LYACSHCG+ ++G E+F M ++Y+ +PR+EH+ C+VDLL R G + +A I++MP++
Sbjct: 198 LYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQP 257
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
N +IW+TLL AC H +D+A +IL + P + YVLLSN++AS +RW V + R+
Sbjct: 258 NVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRK 317
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M VKK PG S +E+ N+VH+F MGDKSHP+S I L+E+T ++ GYVP
Sbjct: 318 QMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISN 377
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAF---AEHTRGLIVM-----------LPFKYISEIKN 405
D++ EEKE + +HSEK+AIAF + R I + L K +S++ N
Sbjct: 378 VYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYN 437
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
REI+VRD SRFHHF+NG CSC DYW
Sbjct: 438 REIVVRDRSRFHHFKNGSCSCQDYW 462
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 88/164 (53%), Gaps = 2/164 (1%)
Query: 85 LATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSM 144
+A + G+ IH+ V+++G + V +SL+ +Y+ CG + + K F + D+V W+S+
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 145 IAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYR 204
I + +GK EEA+ L+ +M K + + T VSLL AC+ G G M+K
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL 120
Query: 205 RKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
+ L ++DL RCG ++EA L M V N++ W +L+
Sbjct: 121 TR-NLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLI 162
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 179/449 (39%), Positives = 278/449 (61%), Gaps = 24/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF +SL MY +SG + + K ++ +N+I++ T+I A+N +E+ L+ +
Sbjct: 406 GFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELF 465
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
N + G TF S++S + + T+G+G+QIHA V+K+G L+ V ++LISMYSRC
Sbjct: 466 NEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRC 525
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ + + F + E +V+ W+S+I + HG +A+ LF +M ++ N+VT++++L
Sbjct: 526 GNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVL 585
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL +G + F M ++ PR+EHY C+VD+LGR G L EA I +MP KA+
Sbjct: 586 SACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQFINSMPYKAD 645
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A++W+T L AC+ H + ++ A+ I+ P D A Y+LLSN++AS +W VS R+A
Sbjct: 646 ALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASISKWDEVSNIRKA 705
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+E+ + KE G SW+E++N+VH+F +GD SHP++ EI L+ L+ ++K GYVP+
Sbjct: 706 MKEKXLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIKKLGYVPNLDFV 765
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIV---MLP----------------FKYIS 401
+HD++ E+KE L HSEK+A+AF GLI M P KYIS
Sbjct: 766 LHDVEEEQKEKLLFQHSEKIAVAF-----GLISTSKMKPIRVFKNLRICGDCHSAIKYIS 820
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
REIIVRDA+RFHH ++G+CSC +YW
Sbjct: 821 MATGREIIVRDANRFHHIKDGRCSCNEYW 849
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 146/314 (46%), Gaps = 12/314 (3%)
Query: 1 GFELDLVAGSSLAHMYMK---SGSLVEGEKVIRLMPIRNVIAWITLIAGKAQ-NGLAEDV 56
G LD G L +MY K GS+ K+ + NV +W +I G Q G E+
Sbjct: 301 GLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEA 360
Query: 57 LDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISM 116
LD + M + P+ TF S + +C+ LA L G+Q+ VK G S V +SLISM
Sbjct: 361 LDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISM 420
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
Y+R G +DD+ K F +++ ++++I AY + EEA+ LF ++E + A+ TF
Sbjct: 421 YARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTF 480
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC--VVDLLGRCGYLDEAAALIRN 234
SLL + G KG + ++K +L C ++ + RCG ++ A + +
Sbjct: 481 ASLLSGAASIGTIGKGEQIHARVIKS---GLKLNQSVCNALISMYSRCGNIESAFQVFED 537
Query: 235 MPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQ 292
M + N I W ++++ H A + ++L GV P + +LS +
Sbjct: 538 MEDR-NVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNE 596
Query: 293 GVSEFREAMRERNV 306
G F+ E V
Sbjct: 597 GWKHFKSMYTEHGV 610
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 130/272 (47%), Gaps = 15/272 (5%)
Query: 5 DLVAGSSLAHMYMKS-GSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
D+ G L M++K G LV KV MP RN + W +I Q G A + +D + M
Sbjct: 203 DVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDM 262
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC--- 120
G+ PD+ T VIS+C+ + L GQQ+H++ ++ G +LD V LI+MY++C
Sbjct: 263 IFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVD 322
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGK-GEEAINLFEQMEQKEFEANDVTFVSL 179
G + + K F + +V W++MI Y G EEA++LF M N TF S
Sbjct: 323 GSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSST 382
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV----VDLLGRCGYLDEAAALIRNM 235
L AC++ G + F V K CV + + R G +D+A ++
Sbjct: 383 LKACANLAALRIGEQVFTHAV-----KLGFSSVNCVANSLISMYARSGRIDDARKAF-DI 436
Query: 236 PVKANAIIWKTLLSACKTHKSTDMAGRIAEEI 267
+ N I + T++ A + +++ A + EI
Sbjct: 437 LFEKNLISYNTVIDAYAKNLNSEEALELFNEI 468
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 109/254 (42%), Gaps = 6/254 (2%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLM-PIRNVIAWITLIAGKAQNGLAEDVLDQY 60
+LD V +SL +Y K G + + RLM R++I+W +++ A N + L +
Sbjct: 97 LQLDSVTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTF 156
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAG-ASLDVGVISSLISMYSR 119
M G+ P++ F + +CS + G I V+K G DV V LI M+ +
Sbjct: 157 VDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVK 216
Query: 120 C-GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
G L + K F + + V W+ MI G EAI+LF M +E + T
Sbjct: 217 GRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSG 276
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDE--AAALIRNMP 236
++ AC++ L G + ++ R C++++ +C AA I +
Sbjct: 277 VISACANMELLLLGQQLHSQAIRHGLTLDRCVG-CCLINMYAKCSVDGSMCAARKIFDQI 335
Query: 237 VKANAIIWKTLLSA 250
+ N W +++
Sbjct: 336 LDHNVFSWTAMITG 349
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 90/208 (43%), Gaps = 13/208 (6%)
Query: 49 QNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVG 108
NG + M G PD T+ + C + G +H ++ ++ LD
Sbjct: 43 NNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSV 102
Query: 109 VISSLISMYSRCGCLDDSVKTF-LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQK 167
++SLIS+YS+CG + + F L D++ WS+M++ + + G A+ F M +
Sbjct: 103 TLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIEN 162
Query: 168 EFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV----VDLL--GR 221
+ N+ F + ACS G F ++K L+ CV +D+ GR
Sbjct: 163 GYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIK----TGYLQSDVCVGCGLIDMFVKGR 218
Query: 222 CGYLDEAAALIRNMPVKANAIIWKTLLS 249
G L A + MP + NA+ W +++
Sbjct: 219 -GDLVSAFKVFEKMPER-NAVTWTLMIT 244
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 177/449 (39%), Positives = 277/449 (61%), Gaps = 25/449 (5%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F D+ G+++ MY K G + KV +P+++VI+W +LI G +QNGLA + +D Y+
Sbjct: 373 FLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYS 432
Query: 62 LMRMV-GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
MR G P++ T+VS++++ S+L L QG + H +++K D+ V + L+ MY +C
Sbjct: 433 SMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKC 492
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L D++ F E + V W+++I+ +G HG G +A+ LF++M+ + + + +TFVSLL
Sbjct: 493 GKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLL 552
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL ++G F LM + Y +P L+HY C+VDL GR G+L++A ++NMPV+ +
Sbjct: 553 SACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPVRPD 612
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+W LL AC+ H++ ++ +++ +L V ++ YVLLSNI+A W+GV E R
Sbjct: 613 VSVWGALLGACRIHENVELVRTVSDHLLKVESENVGYYVLLSNIYAKLGHWEGVDEVRSL 672
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
R+R +KK PG S +E+ ++ F G+++HP+ EI L LT++MK GYVPD
Sbjct: 673 ARDRGLKKTPGWSSIEVDKKIDVFYTGNQTHPKCEEIYSELRNLTAKMKSIGYVPDYNFV 732
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
+ D++ +EKE L HSE+LA+AF G+I P K+IS
Sbjct: 733 LQDVEDDEKENILTSHSERLAMAF-----GIISTPPKTTLQIFKNLRVCGDCHNATKFIS 787
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+I REIIVRD++RFHHF++G CSCGDYW
Sbjct: 788 KITEREIIVRDSNRFHHFKDGVCSCGDYW 816
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 119/250 (47%), Gaps = 1/250 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE D+ +S H Y + G + + M IR++ W +I+G NG + L+ +
Sbjct: 169 GFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVF 228
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ MR D +T S++ C +L + G IH +K G D+ V ++LI+MY++
Sbjct: 229 DEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKF 288
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L + F + + D+V W+S++AA+ + K A+ ++ +M + +T VSL
Sbjct: 289 GELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLA 348
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
+ G + ++ + ++D+ + G++D A + +PVK +
Sbjct: 349 SVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVK-D 407
Query: 241 AIIWKTLLSA 250
I W +L++
Sbjct: 408 VISWNSLITG 417
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 131/284 (46%), Gaps = 17/284 (5%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF- 68
+ L + Y G + + ++V W ++I+ A+ G +D +N F
Sbjct: 79 AKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAYARIGHFHAAVDCFNEFLSTSFL 138
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
+ D TF VI +C L G+++H V+K G DV + +S I YSR G + +
Sbjct: 139 QSDHYTFPPVIRAC---GNLDDGRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACN 195
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F D+ W++MI+ + +GK EA+ +F++M K + VT SLL C
Sbjct: 196 LFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDD 255
Query: 189 KEKGMEFFDLMVKKYRRKPRLEH--YTC--VVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
G +++ Y K LE + C ++++ + G L A + M V+ + + W
Sbjct: 256 IISG-----VLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVR-DIVSW 309
Query: 245 KTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLSNIHA 286
+LL+A + +K +A + ++ +GV P D V L+++ A
Sbjct: 310 NSLLAAFEQNKKPVIALGVYNKMHSIGVVP-DLLTLVSLASVAA 352
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 31/205 (15%)
Query: 72 KITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFL 131
+I F + C+++ +Q+HA +V +G + + + + LI+ Y+ G + + TF
Sbjct: 43 EIDFNRIFLYCTKVHL---AKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFD 99
Query: 132 ECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEF-EANDVTFVSLLYACS------ 184
+ + DV W+SMI+AY G A++ F + F +++ TF ++ AC
Sbjct: 100 QIQTKDVYTWNSMISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNLDDGR 159
Query: 185 --HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
HC + + G E Y + Y+ R G++ A L NM ++ +
Sbjct: 160 KVHCLVLKLGFE-----CDVYIAASFIHFYS-------RFGFVSLACNLFDNMMIR-DIG 206
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEI 267
W ++S + G++AE +
Sbjct: 207 TWNAMISGFY------LNGKVAEAL 225
>gi|356575510|ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Glycine max]
Length = 618
Score = 358 bits (918), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 172/446 (38%), Positives = 281/446 (63%), Gaps = 25/446 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
+ G++L H+Y K S+ + ++ MP +N + W +++AG QNG E+ L + +
Sbjct: 178 NCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEEALLIFRNAQ 237
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
++GF D S +S+C+ LATL +G+Q+HA K+G ++ V SSLI MY++CGC+
Sbjct: 238 LMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLIDMYAKCGCIR 297
Query: 125 DSVKTFLEC-EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
++ F E +VLW++MI+ + H + EA+ LFE+M+Q+ F +DVT+V +L AC
Sbjct: 298 EAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGFFPDDVTYVCVLNAC 357
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
SH GL E+G ++FDLMV+++ P + HY+C++D+LGR G + +A LI MP A + +
Sbjct: 358 SHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIERMPFNATSSM 417
Query: 244 WKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
W +LL++CK + + + A A+ + + P +A ++LL+NI+A+ K+W V+ R+ +RE
Sbjct: 418 WGSLLASCKIYGNIEFAEIAAKYLFEMEPNNAGNHILLANIYAANKKWDEVARARKLLRE 477
Query: 304 RNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHD 363
+V+KE G SW+EIKN++H FT+G+++HP+ +I L+ L E+K Y DT D+HD
Sbjct: 478 TDVRKERGTSWIEIKNKIHSFTVGERNHPQIDDIYAKLDNLVVELKKLNYKVDTSNDLHD 537
Query: 364 MDSEEKEYNLKHHSEKLAIAFAEHTRGLIVM---LPFKYISEIK---------------- 404
++ K+ L+HHSEKLAI F GL+ + +P + I ++
Sbjct: 538 VEENRKQMLLRHHSEKLAITF-----GLMCLPRDIPIRIIKNLRICGDCHTFMKLVSKST 592
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
+REIIVRD +RFHHF++G CSCG++W
Sbjct: 593 SREIIVRDTNRFHHFKDGFCSCGEFW 618
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 140/308 (45%), Gaps = 3/308 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E+D++ + L +MY K + K MP++++++W T+I QN + L
Sbjct: 73 GLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVKSLVSWNTVIGALTQNAEDREALKLL 132
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G ++ T SV+ +C+ + + Q+HA +KA + V ++L+ +Y++C
Sbjct: 133 IQMQREGTPFNEFTISSVLCNCAFKCAILECMQLHAFSIKAAIDSNCFVGTALLHVYAKC 192
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
+ D+ + F + V WSSM+A Y +G EEA+ +F + F+ + S +
Sbjct: 193 SSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEEALLIFRNAQLMGFDQDPFMISSAV 252
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+ +G + + K + + ++D+ +CG + EA + + + +
Sbjct: 253 SACAGLATLIEGKQVHAI-SHKSGFGSNIYVSSSLIDMYAKCGCIREAYLVFQGVLEVRS 311
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
++W ++S H A + E++ G P D +L+ +G F
Sbjct: 312 IVLWNAMISGFARHARAPEAMILFEKMQQRGFFPDDVTYVCVLNACSHMGLHEEGQKYFD 371
Query: 299 EAMRERNV 306
+R+ N+
Sbjct: 372 LMVRQHNL 379
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 87/171 (50%), Gaps = 6/171 (3%)
Query: 82 CSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLW 141
C++ + G+ HA++++ G +D+ + LI+MYS+C +D + K F E +V W
Sbjct: 53 CAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVKSLVSW 112
Query: 142 SSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVK 201
+++I A + + EA+ L QM+++ N+ T S+L +C K +E L
Sbjct: 113 NTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVL---CNCAFKCAILECMQLHAF 169
Query: 202 KYRRKPRLEHY--TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+ + T ++ + +C + +A+ + +MP K NA+ W ++++
Sbjct: 170 SIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEK-NAVTWSSMMAG 219
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 358 bits (918), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 178/449 (39%), Positives = 266/449 (59%), Gaps = 24/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + D+ GSSL MY KS + + E+V + R+ I+W +L+AG QNG + L +
Sbjct: 236 GIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLF 295
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M RP + F SVI +C+ LATL G+Q+H V++ G ++ + S+L+ MYS+C
Sbjct: 296 RQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKC 355
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + K F D V W+++I + HG G EA++LFE+M+++ + N V FV++L
Sbjct: 356 GNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVL 415
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL ++ +F+ M K Y LEHY V DLLGR G L+EA I M V+
Sbjct: 416 TACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYDFISKMRVEPT 475
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+W TLLS+C HK+ ++A ++AE+I ++ ++ YVL+ N++AS RW+ +++ R
Sbjct: 476 GSVWSTLLSSCSVHKNLELAEKVAEKIFTIDSENMGAYVLMCNMYASNGRWKEMAKLRLR 535
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
+R++ ++K+P SW+E+KN+ H F GD+SHP I+ +L+ + +M+ GYV DT
Sbjct: 536 VRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDRINEFLKAVMEQMEKEGYVADTSGV 595
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
+HD+D E K L HSE+LA+AF G+I P K+IS
Sbjct: 596 LHDVDEEHKRELLFGHSERLAVAF-----GIINTEPGTTIRVTKNIRICTDCHVAIKFIS 650
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+I REIIVRD SRFHHF G CSCGDYW
Sbjct: 651 KITEREIIVRDNSRFHHFNRGSCSCGDYW 679
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 143/285 (50%), Gaps = 6/285 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + DL G++L +MY K + KV LMP ++V+++ T+IAG AQ+G+ ED L
Sbjct: 135 GMDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMV 194
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M +PD T SV+ SE + +G++IH V++ G DV + SSL+ MY++
Sbjct: 195 REMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKS 254
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
++DS + F D + W+S++A Y +G+ EA+ LF QM + V F S++
Sbjct: 255 ARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVI 314
Query: 181 YACSHCGLKEKGMEFFDLMVK-KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
AC+H G + +++ + R + + +VD+ +CG + A + M +
Sbjct: 315 PACAHLATLHLGKQLHGYVLRGGFGRNIFIA--SALVDMYSKCGNIQAARKIFDRMNLH- 371
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLS 282
+ + W ++ H A + EE+ GV P A +L+
Sbjct: 372 DEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLT 416
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 118/281 (41%), Gaps = 33/281 (11%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
L + S + +Y L E V + + V+AW ++I L L + M
Sbjct: 37 LSHTSASIVISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTDQSLFSRALASFVEM 96
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
R G PD F SV+ SC+ + L G+ +H +V+ G D+ ++L++MYS+ +
Sbjct: 97 RASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGI 156
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
D K F DVV ++++IA Y G E+A+ + +M + + + T S+L
Sbjct: 157 DSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIF 216
Query: 184 SHCGLKEKGMEFFDLMVKK---------------YRRKPRLEHYTCVVDLLGR------- 221
S KG E +++K Y + R+E V L R
Sbjct: 217 SEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWN 276
Query: 222 ---CGYL-----DEAAALIRNM---PVKANAIIWKTLLSAC 251
GY+ +EA L R M V+ A+ + +++ AC
Sbjct: 277 SLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPAC 317
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 358 bits (918), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 180/449 (40%), Positives = 268/449 (59%), Gaps = 24/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ELD G++L Y KSGS+ + +V MP R++++W +IAG AQNGL + ++
Sbjct: 663 GYELDTGVGNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFA 722
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ P+K +FVS++++CS + L +G+++HAE+VK DV V ++LISMY++C
Sbjct: 723 YQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKC 782
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ + F +VV W++MI AY HG +A+ F ME++ + + TF S+L
Sbjct: 783 GSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSIL 842
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+H GL +G + F M +Y P +EHY C+V LLGR EA LI MP +
Sbjct: 843 SACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPD 902
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A +W+TLL AC+ H + +A A L +N ++ A Y+LLSN++A+A RW V++ R
Sbjct: 903 AAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRV 962
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M R ++KEPG SW+E+ N +H+F D+SHP + EI L+ L+ EM+ GY PDT
Sbjct: 963 MEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEMEEAGYFPDTQHV 1022
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
+HD+ +E +L HSE+LAIA+ GLI P K+IS
Sbjct: 1023 LHDLGKAHQETSLCTHSERLAIAY-----GLIKTPPGTPIRIFKNLRICGDCHTASKFIS 1077
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
++ REII RD++RFH F+NGKCSC DYW
Sbjct: 1078 KLVGREIIARDSNRFHSFKNGKCSCEDYW 1106
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 141/254 (55%), Gaps = 2/254 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +LD+ G++L +MY++ GSL + V + R+V++W +I G A G ++ +
Sbjct: 562 GLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELF 621
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ GFRP K TF S++ C+ A L +G+++ A ++ +G LD GV ++LIS YS+
Sbjct: 622 WQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKS 681
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + D+ + F + D+V W+ +IA Y +G G+ A+ QM++++ N +FVSLL
Sbjct: 682 GSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLL 741
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACS E+G +VK+ + + + ++ + +CG EA + N+ ++ N
Sbjct: 742 NACSSFSALEEGKRVHAEIVKR-KLQGDVRVGAALISMYAKCGSQGEAQEVFDNI-IEKN 799
Query: 241 AIIWKTLLSACKTH 254
+ W +++A H
Sbjct: 800 VVTWNAMINAYAQH 813
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 137/250 (54%), Gaps = 2/250 (0%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ + L +MY+K S+++ +V + MP R+VI+W +LI+ AQ G + + M+
Sbjct: 61 DIFLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQ 120
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
GF P+KIT++S++++C A L G++IH++++KAG D V +SL+SMY +CG L
Sbjct: 121 NAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLP 180
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ + F DVV +++M+ Y +E + LF QM + + VT+++LL A +
Sbjct: 181 RARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFT 240
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
+ ++G L V++ + T +V + RCG +D A + + + +++
Sbjct: 241 TPSMLDEGKRIHKLTVEE-GLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADR-DVVVY 298
Query: 245 KTLLSACKTH 254
L++A H
Sbjct: 299 NALIAALAQH 308
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 136/251 (54%), Gaps = 2/251 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D+ G++L MY + G L + ++ MP R++I+W +IAG A+ + + Y
Sbjct: 360 GHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLY 419
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G +P ++TF+ ++S+C+ + G+ IH +++++G + + ++L++MY RC
Sbjct: 420 KQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRC 479
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L ++ F + DV+ W+SMIA + HG E A LF++M+ +E E +++TF S+L
Sbjct: 480 GSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVL 539
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
C + E G + + + + + ++++ RCG L +A + ++ + +
Sbjct: 540 SGCKNPEALELGKQIHGRITES-GLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHR-D 597
Query: 241 AIIWKTLLSAC 251
+ W ++ C
Sbjct: 598 VMSWTAMIGGC 608
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 103/184 (55%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
++L +MY + GSL+E + V R+VI+W ++IAG AQ+G E + M+
Sbjct: 469 ANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEEL 528
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
PD ITF SV+S C L G+QIH + ++G LDV + ++LI+MY RCG L D+
Sbjct: 529 EPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARN 588
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F ++ DV+ W++MI G+ +AI LF QM+ + F TF S+L C+
Sbjct: 589 VFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSAC 648
Query: 189 KEKG 192
++G
Sbjct: 649 LDEG 652
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 141/268 (52%), Gaps = 4/268 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D+ G++L M ++ G + ++ + R+V+ + LIA AQ+G + +QY
Sbjct: 259 GLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQY 318
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
MR G ++ T++S++++CS L G+ IH+ + + G S DV + ++LISMY+RC
Sbjct: 319 YRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARC 378
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L + + F D++ W+++IA Y EA+ L++QM+ + + VTF+ LL
Sbjct: 379 GDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLL 438
Query: 181 YACSHCGLKEKG-MEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
AC++ G M D++ + L + ++++ RCG L EA + +
Sbjct: 439 SACANSSAYADGKMIHEDILRSGIKSNGHLAN--ALMNMYRRCGSLMEAQNVFEGTQAR- 495
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEI 267
+ I W ++++ H S + A ++ +E+
Sbjct: 496 DVISWNSMIAGHAQHGSYETAYKLFQEM 523
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 140/284 (49%), Gaps = 4/284 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G++ D +SL MY K G L +V + R+V+++ T++ AQ ++ L +
Sbjct: 158 GYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLF 217
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G PDK+T+++++ + + + L +G++IH V+ G + D+ V ++L++M RC
Sbjct: 218 GQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRC 277
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +D + + F DVV+++++IAA HG EA + +M N T++S+L
Sbjct: 278 GDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSIL 337
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACS E G + + + ++ ++ + RCG L +A L MP K +
Sbjct: 338 NACSTSKALEAG-KLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMP-KRD 395
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLS 282
I W +++ + A R+ +++ GV P LLS
Sbjct: 396 LISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLS 439
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 105/184 (57%), Gaps = 7/184 (3%)
Query: 69 RP---DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD 125
RP ++ T+V+++ +C+ L + ++IHA++V+A D+ + + LI+MY +C + D
Sbjct: 21 RPTETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLD 80
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
+ + F E DV+ W+S+I+ Y G ++A LFE+M+ F N +T++S+L AC
Sbjct: 81 AHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYS 140
Query: 186 CGLKEKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
E G + ++K Y+R PR+++ ++ + G+CG L A + + + + + +
Sbjct: 141 PAELENGKKIHSQIIKAGYQRDPRVQN--SLLSMYGKCGDLPRARQVFAGISPR-DVVSY 197
Query: 245 KTLL 248
T+L
Sbjct: 198 NTML 201
>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 358 bits (918), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 178/452 (39%), Positives = 278/452 (61%), Gaps = 28/452 (6%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNG------------- 51
D+VA +++ G L+E ++ MP RNV+AW ++I+G+ +G
Sbjct: 117 DVVASTNMIDGLCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKG 176
Query: 52 LAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVIS 111
+ L ++LM+ G RP + +SV+S C LA+L G+Q+H+++V++ +D+ V S
Sbjct: 177 FELEALALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSS 236
Query: 112 SLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEA 171
LI+MY +CG L + + F D+V+W+S+IA Y HG GE+A+ +F M
Sbjct: 237 VLITMYIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAP 296
Query: 172 NDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAAL 231
+++TF+ +L ACS+ G ++G+E F+ M KY+ P+ EHY C+VDLLGR G L+EA L
Sbjct: 297 DEITFIGVLSACSYTGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNL 356
Query: 232 IRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRW 291
I NMPV+A+AI+W LL AC+THK+ D+A A+++L + P +A PY+LLSN+++S RW
Sbjct: 357 IENMPVEADAIVWGALLGACRTHKNLDLAEIAAKKLLQLEPNNAGPYILLSNLYSSQSRW 416
Query: 292 QGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFT-MGDKSHPRSMEIDLYLEELTSEMKL 350
+ V E R+ MR +N++K PG SW+E+ +VH F+ G SHP I L +L + ++
Sbjct: 417 KDVVELRKTMRAKNLRKSPGCSWIEVDKKVHIFSGGGSTSHPEHEMILKKLGKLGALLRE 476
Query: 351 RGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------P 396
GY PD MHD+D EEK ++L+ HSEKLA+A+ + G+ + +
Sbjct: 477 AGYCPDGSFVMHDVDEEEKVHSLRDHSEKLAVAYGLLKVPEGMPIRVMKNLRVCGDSHST 536
Query: 397 FKYISEIKNREIIVRDASRFHHFRNGKCSCGD 428
K I+++ REII+RD +RFHHF++G CSC D
Sbjct: 537 IKLIAQVTGREIILRDTNRFHHFKDGLCSCSD 568
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 82/153 (53%), Gaps = 4/153 (2%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F++D+ S L MY+K G LV ++V ++++ W ++IAG AQ+G E L+ ++
Sbjct: 228 FDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFH 287
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV--ISSLISMYSR 119
M PD+ITF+ V+S+CS + +G +I E +K+ +D + ++ + R
Sbjct: 288 DMFSSSIAPDEITFIGVLSACSYTGKVKEGLEIF-ESMKSKYQVDPKTEHYACMVDLLGR 346
Query: 120 CGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFH 151
G L++++ +D ++W +++ A H
Sbjct: 347 AGKLNEAMNLIENMPVEADAIVWGALLGACRTH 379
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 143/322 (44%), Gaps = 36/322 (11%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E + ++ + L Y+++G + E KV MP RNV++W +I G Q GL E+ +
Sbjct: 22 ETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGLIEEA--ELLF 79
Query: 63 MRMVGFRPDK--ITFVSVISSCSELATLGQGQQIHAEV-VKAGASLDVGVISSLISMYSR 119
RM P++ +++ ++ E + + +Q+ + VK DV +++I
Sbjct: 80 WRM----PERNVVSWTVMLGGLIEDGRVDEARQLFDMMPVK-----DVVASTNMIDGLCS 130
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAA-------------YGFHGKGEEAINLFEQMEQ 166
G L ++ + F E +VV W+SMI+ Y G EA+ LF M++
Sbjct: 131 EGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQR 190
Query: 167 KEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY--TCVVDLLGRCGY 224
+ + + +S+L C + G + +V R + ++ Y + ++ + +CG
Sbjct: 191 EGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLV---RSQFDIDIYVSSVLITMYIKCGD 247
Query: 225 LDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLS 282
L A + K + ++W ++++ H + A + ++ + P + +LS
Sbjct: 248 LVTAKRVFDRFSSK-DIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLS 306
Query: 283 NIHASAKRWQGVSEFREAMRER 304
+ K +G+ F E+M+ +
Sbjct: 307 ACSYTGKVKEGLEIF-ESMKSK 327
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 95/221 (42%), Gaps = 25/221 (11%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDK--I 73
Y ++ E K+ MP N I+W L++G QNG+ + ++ M P++ +
Sbjct: 4 YFQNKRPREARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKM------PERNVV 57
Query: 74 TFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLEC 133
++ ++I + + + + + + + ++ LI G +D++ + F
Sbjct: 58 SWTAMIRGYVQEGLIEEAELLFWRMPERNVVSWTVMLGGLI----EDGRVDEARQLFDMM 113
Query: 134 EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEF---------EANDVTFVSLLYACS 184
DVV ++MI G+ EA +F++M Q+ E +D T+ +++
Sbjct: 114 PVKDVVASTNMIDGLCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYE 173
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYL 225
G + + + F LM ++ R + V+ +L CG L
Sbjct: 174 RKGFELEALALFSLMQREGVRP----SFPSVISVLSVCGSL 210
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 358 bits (918), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 179/429 (41%), Positives = 266/429 (62%), Gaps = 14/429 (3%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y + G + + K +MP R+ ++W +IAG AQ+G E+ L+ + ++ G ++ TF
Sbjct: 338 YGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATF 397
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
+S+C+++A L G+QIH + VK G V ++L++MY +CG +D++ TF E
Sbjct: 398 GCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEE 457
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
DVV W++M+A Y HG G +A+ +FE M+ + +++T V +L ACSH GL ++G E+
Sbjct: 458 KDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEY 517
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK 255
F M K Y P +HYTC++DLLGR G L+EA LIRNMP + A W LL A + H
Sbjct: 518 FYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHG 577
Query: 256 STDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWL 315
+T++ + AE + + PQ++ YVLLSN++A++ RW + R MR+ V+K PG SW+
Sbjct: 578 NTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWV 637
Query: 316 EIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKH 375
E++N++H F++GD SHP I YLEEL +M+ GYV T +HD++ EEKE+ LK+
Sbjct: 638 EVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLKY 697
Query: 376 HSEKLAIAFAEHT----RGLIVM----------LPFKYISEIKNREIIVRDASRFHHFRN 421
HSEKLA+AF T R + VM K+IS+I R II+RD+ RFHHF
Sbjct: 698 HSEKLAVAFGILTIPGGRPIRVMKNLRVCEDCHSAIKHISKIVGRLIILRDSHRFHHFNE 757
Query: 422 GKCSCGDYW 430
G CSCGDYW
Sbjct: 758 GFCSCGDYW 766
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 119/273 (43%), Gaps = 83/273 (30%)
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
L + GL + G E+F M ++Y P +HYTC++DLLGR L+E A
Sbjct: 770 FLLVVIYTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEEGA--------- 820
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
LL A + H +T++ + A+ + PQ++ G+S+
Sbjct: 821 --------LLGASRIHGNTELGEKAAQMFFKMGPQNS-----------------GISK-- 853
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
MR+ V+K PG SW E++N++H F++G R E +LEEL +M+
Sbjct: 854 --MRDVGVQKVPGYSWFEVQNKIHTFSVG-LFLSRERENIGFLEELDLKMR--------- 901
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP---------------------F 397
EEKE LK+ SE LA A I+ +P
Sbjct: 902 -----EREEEKERTLKYLSENLAAALG------ILTIPVGRPNRVMKKRVYVCEDCRSAI 950
Query: 398 KYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
K++S+I R I +RD+ H F CSCG+YW
Sbjct: 951 KHMSKIVGRLITLRDS---HRFNESICSCGEYW 980
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 91/194 (46%), Gaps = 17/194 (8%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ G++L MY K GS+ E + ++V++W T++AG A++G L +
Sbjct: 424 GYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVF 483
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISS------LI 114
M+ G +PD+IT V V+S+CS L +G + + K D GVI + +I
Sbjct: 484 ESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTK-----DYGVIPTSKHYTCMI 538
Query: 115 SMYSRCGCLDDSVKTFLECEYSD-VVLWSSMIAAYGFHGK---GEEAINLFEQMEQKEFE 170
+ R G L+++ + W +++ A HG GE+A + +ME +
Sbjct: 539 DLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQ--N 596
Query: 171 ANDVTFVSLLYACS 184
+ +S LYA S
Sbjct: 597 SGMYVLLSNLYAAS 610
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 128/283 (45%), Gaps = 18/283 (6%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D ++ +++ Y + G L + ++ P R+V W +++G QNG+ ++ ++ M
Sbjct: 234 DAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEM- 292
Query: 65 MVGFRPDK--ITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
P+K +++ ++I+ + + I E+ ++ ++ +++I+ Y + G
Sbjct: 293 -----PEKNEVSYNAMIAGYVQTKKM----DIARELFESMPCRNISSWNTMITGYGQIGD 343
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
+ + K F D V W+++IA Y G EEA+N+F +++Q N TF L
Sbjct: 344 IAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALST 403
Query: 183 CSHCGLKEKGMEFFDLMVK-KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
C+ E G + VK Y + + ++ + +CG +DEA + K +
Sbjct: 404 CADIAALELGKQIHGQAVKMGYGTGCFVGN--ALLAMYFKCGSIDEANDTFEGIEEK-DV 460
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLS 282
+ W T+L+ H A + E + GV P + +LS
Sbjct: 461 VSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLS 503
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 114/250 (45%), Gaps = 22/250 (8%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E DL + + + Y+++ L + ++ LMP ++V++W +L++G AQNG ++ + ++
Sbjct: 108 ERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDN 167
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVIS--SLISMYSRC 120
M P+K + IS LA +I + + D +IS L+ + R
Sbjct: 168 M------PEK----NSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRK 217
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
L D+ F + D + W++MI+ Y G +A LF++ ++ T+ +++
Sbjct: 218 KKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDV----FTWTAMV 273
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
G+ ++ FFD M +K Y ++ + +D A L +MP + N
Sbjct: 274 SGYVQNGMLDEAKTFFDEMPEKNEVS-----YNAMIAGYVQTKKMDIARELFESMPCR-N 327
Query: 241 AIIWKTLLSA 250
W T+++
Sbjct: 328 ISSWNTMITG 337
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 108/265 (40%), Gaps = 55/265 (20%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQN---GLAEDVLDQYN 61
D++ + +M++G V MP R+ +++ +I+G +N LA ++ DQ
Sbjct: 48 DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQM- 106
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
P++ F S +V +++ Y R
Sbjct: 107 --------PERDLF----------------------------SWNV-----MLTGYVRNC 125
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
L D+ + F DVV W+S+++ Y +G +EA +F+ M +K N +++ LL
Sbjct: 126 RLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEK----NSISWNGLLA 181
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
A H G E+ F+ + L + C++ R L +A L MPV+ +A
Sbjct: 182 AYVHNGRIEEACLLFE-----SKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVR-DA 235
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEE 266
I W T++S A R+ +E
Sbjct: 236 ISWNTMISGYAQGGGLSQARRLFDE 260
>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
Length = 659
Score = 358 bits (918), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 181/418 (43%), Positives = 260/418 (62%), Gaps = 13/418 (3%)
Query: 26 EKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSEL 85
EK+ + +N+I+W +I +N L +D Y M PD ITF SV+ +C +L
Sbjct: 242 EKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGDL 301
Query: 86 ATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMI 145
+ L G++IH V K ++ + +SLI MY+RCGCLDD+ + F ++ DV W+S+I
Sbjct: 302 SALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFRDVASWTSLI 361
Query: 146 AAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRR 205
+AYG G+G A+ LF +M + + FV++L ACSH GL ++G +F M YR
Sbjct: 362 SAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACSHSGLLDEGRIYFKQMTDDYRI 421
Query: 206 KPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAE 265
PR+EHY C+VDLLGR G +DEA +I+ MP++ N +W TLLS+C+ + D+ A+
Sbjct: 422 TPRIEHYACLVDLLGRAGRVDEAYNIIKQMPIEPNERVWATLLSSCRVFTNMDIGILAAD 481
Query: 266 EILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFT 325
+L + P+ + YVLLSNI+A A RW+ V+E R M+ + ++K PG+S +E+ NQVH F
Sbjct: 482 NLLQLAPEQSGYYVLLSNIYAKAGRWKEVTEIRSVMKRKKIRKTPGISNVELNNQVHTFL 541
Query: 326 MGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFA 385
GD SHP+S EI L L ++MK GYVP+T + +HD++ E+KE +L HSEKLAI FA
Sbjct: 542 AGDTSHPQSKEIYEELGVLVAKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFA 601
Query: 386 ---------EHTRGLIVM----LPFKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
T+ L V + K IS+I REIIVRD +RFHHF++G CSCGDYW
Sbjct: 602 LLNTQEYQIRITKNLRVCGDCHIAAKLISKIVEREIIVRDTNRFHHFKDGVCSCGDYW 659
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 132/288 (45%), Gaps = 29/288 (10%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G L Y G KV M RNV+ + +I N +D L + M GF
Sbjct: 56 GIKLMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGF 115
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
RPD T+ V+ +CS L G IH +V+K G ++ V + LI+MY +CGCL ++ +
Sbjct: 116 RPDNYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARR 175
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH--- 185
F E + DVV W+SM+A Y + + ++A+ + +ME + + T SL+ A ++
Sbjct: 176 VFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANTSS 235
Query: 186 ----------CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM 235
L+ K + +++M++ Y + T VDL YL +
Sbjct: 236 ENVLYVEKIFVNLERKNLISWNVMIRVYMKNSLP---TQAVDL-----YLQ-----MEKC 282
Query: 236 PVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSN 283
V+ +AI + ++L AC + + RI E V + P +LL N
Sbjct: 283 RVEPDAITFASVLPACGDLSALLLGRRIHEY---VEKKKLCPNLLLEN 327
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 110/250 (44%), Gaps = 35/250 (14%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + +L G+ L MY K G L E +V M ++V++W +++AG A N +D L+
Sbjct: 149 GLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEIC 208
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G +PD T S++ + +A ++ E
Sbjct: 209 REMEDYGQKPDGCTMASLMPA---VANTSSENVLYVE----------------------- 242
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
K F+ E +++ W+ MI Y + +A++L+ QME+ E + +TF S+L
Sbjct: 243 -------KIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVL 295
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC G + V+K + P L ++D+ RCG LD+A + M + +
Sbjct: 296 PACGDLSALLLGRRIHEY-VEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFR-D 353
Query: 241 AIIWKTLLSA 250
W +L+SA
Sbjct: 354 VASWTSLISA 363
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 79/179 (44%), Gaps = 33/179 (18%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
+L+ +SL MY + G L + ++V M R+V +W +LI+ G + + + M
Sbjct: 322 NLLLENSLIDMYARCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEML 381
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G PD I FV+++S+CS L +G+ ++ D I+ I Y+ CL
Sbjct: 382 NSGQAPDSIAFVAILSACSHSGLLDEGRIYFKQMT------DDYRITPRIEHYA---CLV 432
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
D + G G+ +EA N+ +QM E N+ + +LL +C
Sbjct: 433 DLL---------------------GRAGRVDEAYNIIKQM---PIEPNERVWATLLSSC 467
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 82/187 (43%), Gaps = 24/187 (12%)
Query: 92 QQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFH 151
+++H + + + + L+ Y+ CG + K F E +VV ++ MI +Y +
Sbjct: 38 KKLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNN 97
Query: 152 GKGEEAINLFEQMEQKEFEANDVTFVSLLYACS-----------HCGLKEKGMEFFDLMV 200
+ ++ + +F +M F ++ T+ +L ACS H + + G++ F+L V
Sbjct: 98 HRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYGLLIHGDVLKVGLD-FNLFV 156
Query: 201 KKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMA 260
++ + G+CG L EA + M K + + W ++++ + D A
Sbjct: 157 G-----------NGLIAMYGKCGCLFEARRVFDEMIWK-DVVSWNSMVAGYAHNMRFDDA 204
Query: 261 GRIAEEI 267
I E+
Sbjct: 205 LEICREM 211
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 358 bits (918), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 179/448 (39%), Positives = 276/448 (61%), Gaps = 27/448 (6%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM- 63
D++AG+++ MY K + +++ MP+R+ ++W TLI G QNGLA + + Y+ M
Sbjct: 306 DIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQ 365
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
+ G +P + TFVSV+ + S L L QG ++HA +K G +LDV V + +I +Y++CG L
Sbjct: 366 KHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKL 425
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
D+++ F + W+++I+ G HG G +A++LF QM+Q+ + VTFVSLL AC
Sbjct: 426 DEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAAC 485
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
SH GL ++G FF++M Y KP +HY C+VD+ GR G LD+A IRNMP+K ++ I
Sbjct: 486 SHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAI 545
Query: 244 WKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
W LL AC+ H + +M ++ + ++P++ YVL+SN++A +W GV E R +R
Sbjct: 546 WGALLGACRIHGNVEMGKVASQNLFELDPKNVGYYVLMSNMYAKVGKWDGVDEVRSLVRR 605
Query: 304 RNVKKEPGVSWLEIKNQVHQFTMGDKS--HPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
+N++K PG S +E+K V+ F G++ HP+ EI L +L ++++ GYVPD +
Sbjct: 606 QNLQKTPGWSSIEVKRSVNVFYSGNQMNIHPQHEEIQRELLDLLAKIRSLGYVPDYSFVL 665
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISE 402
D++ +EKE L +HSE+LAIAF G+I P KYIS+
Sbjct: 666 QDVEEDEKEQILNNHSERLAIAF-----GIINTPPRTPLHIYKNLRVCGDCHNATKYISK 720
Query: 403 IKNREIIVRDASRFHHFRNGKCSCGDYW 430
I REIIVRD++RFHHF++G CSCGD+W
Sbjct: 721 ITEREIIVRDSNRFHHFKDGYCSCGDFW 748
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 148/292 (50%), Gaps = 18/292 (6%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + +L +++ +Y K G L E KV M R+++ W ++I+G Q G ++ +
Sbjct: 200 GLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMF 259
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVI---SSLISMY 117
MR G PD +T +S+ S+ ++ + G+ +H +V+ G DVG I ++++ MY
Sbjct: 260 CGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRG--WDVGDIIAGNAIVDMY 317
Query: 118 SRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE-FEANDVTF 176
++ ++ + + F D V W+++I Y +G EAI++++ M++ E + TF
Sbjct: 318 AKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTF 377
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY--TCVVDLLGRCGYLDEAAALIRN 234
VS+L A SH G ++G L +K L+ Y TCV+DL +CG LDEA L
Sbjct: 378 VSVLPAYSHLGALQQGTRMHALSIKT---GLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQ 434
Query: 235 MPVKANAIIWKTLLSACKTH----KSTDMAGRIAEEILGVNPQDAAPYVLLS 282
P ++ W ++S H K+ + ++ +E G++P LL+
Sbjct: 435 TPRRSTG-PWNAVISGVGVHGHGAKALSLFSQMQQE--GISPDHVTFVSLLA 483
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 115/246 (46%), Gaps = 1/246 (0%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D A +L H Y++ G + + + M R+V AW +++G +N A + + + M
Sbjct: 103 DAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMV 162
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
M G D +T SV+ C L +H VK G ++ V +++I +Y + G L+
Sbjct: 163 MEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLE 222
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ K F D+V W+S+I+ + G+ A+ +F M + +T +SL A +
Sbjct: 223 EVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIA 282
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
CG G MV++ + +VD+ + ++ A + +MPV+ +A+ W
Sbjct: 283 QCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVR-DAVSW 341
Query: 245 KTLLSA 250
TL++
Sbjct: 342 NTLITG 347
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 76/168 (45%), Gaps = 6/168 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G LD+ G+ + +Y K G L E + P R+ W +I+G +G L +
Sbjct: 404 GLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLF 463
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSR 119
+ M+ G PD +TFVS++++CS + QG+ + A G + ++ M+ R
Sbjct: 464 SQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGR 523
Query: 120 CGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGE----EAINLFE 162
G LDD+ D +W +++ A HG E + NLFE
Sbjct: 524 AGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHGNVEMGKVASQNLFE 571
>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
Length = 751
Score = 357 bits (917), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 181/448 (40%), Positives = 266/448 (59%), Gaps = 24/448 (5%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
+E ++ GS+L MY K S+ E V R M RN+I+W +I G QN +E+ + ++
Sbjct: 309 YEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFS 368
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M+M G +PD T SVISSC+ LA+L +G Q H + +G + V ++L+++Y +CG
Sbjct: 369 EMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCG 428
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
++D+ + F E + D V W++++ Y GK +E I+LFE+M + + VTF+ +L
Sbjct: 429 SIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLS 488
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
ACS GL EKG ++FD M K + P +HYTC++DL R G EA I+ MP +A
Sbjct: 489 ACSRAGLVEKGCDYFDSMQKDHDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDA 548
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
W TLLS+C+ + ++ AE +L +PQ+ A YVLL ++HA+ +W V+ R M
Sbjct: 549 FGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGM 608
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
R+R VKKEPG SW++ KN+VH F+ D+SHP S I LE L S+M GY PD + +
Sbjct: 609 RDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKMAEEGYKPDVSSVL 668
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVM---LPF----------------KYISE 402
HD+ +K + + HHSEKLAIAF GLI + +P K+IS+
Sbjct: 669 HDVADADKVHMISHHSEKLAIAF-----GLIFVPQEMPIRIVKNLRVCVDCHNATKFISK 723
Query: 403 IKNREIIVRDASRFHHFRNGKCSCGDYW 430
I R+I+VRDA RFH F +G CSCGD+W
Sbjct: 724 ITGRDILVRDAVRFHKFSDGTCSCGDFW 751
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 121/228 (53%), Gaps = 4/228 (1%)
Query: 24 EGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCS 83
+ + + +LM R+ I W T++ G QNGL + LD + MR G D+ TF S++++C
Sbjct: 230 DAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACG 289
Query: 84 ELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSS 143
LA +G+QIHA + + +V V S+L+ MYS+C + + F +++ W++
Sbjct: 290 ALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTA 349
Query: 144 MIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDL-MVKK 202
MI YG + EEA+ F +M+ + +D T S++ +C++ E+G +F L +V
Sbjct: 350 MIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSG 409
Query: 203 YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
R + + +V L G+CG +++A L M + + W L++
Sbjct: 410 LMRYITVSN--ALVTLYGKCGSIEDAHRLFDEMSFH-DQVSWTALVTG 454
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 127/299 (42%), Gaps = 40/299 (13%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN-LMRMVGF 68
S+LAH S + + E++ MP R+ +++ LI G + G + Y L+R
Sbjct: 87 SALAH----SRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESV 142
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
RP +IT ++I S L+ G +H +V++ G V S L+ MY++ G + D+ +
Sbjct: 143 RPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARR 202
Query: 129 TFLECEYSDVVL-------------------------------WSSMIAAYGFHGKGEEA 157
F E E VV+ W++M+ +G EA
Sbjct: 203 VFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEA 262
Query: 158 INLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVD 217
+++F +M + + TF S+L AC E+G + + + + + +VD
Sbjct: 263 LDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVG-SALVD 321
Query: 218 LLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQD 274
+ +C + A A+ R M + N I W ++ + ++ A R E+ G+ P D
Sbjct: 322 MYSKCRSIRLAEAVFRRMTCR-NIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDD 379
>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
protein [Oryza sativa Japonica Group]
gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 751
Score = 357 bits (917), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 181/448 (40%), Positives = 266/448 (59%), Gaps = 24/448 (5%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
+E ++ GS+L MY K S+ E V R M RN+I+W +I G QN +E+ + ++
Sbjct: 309 YEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFS 368
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M+M G +PD T SVISSC+ LA+L +G Q H + +G + V ++L+++Y +CG
Sbjct: 369 EMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCG 428
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
++D+ + F E + D V W++++ Y GK +E I+LFE+M + + VTF+ +L
Sbjct: 429 SIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLS 488
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
ACS GL EKG ++FD M K + P +HYTC++DL R G EA I+ MP +A
Sbjct: 489 ACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDA 548
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
W TLLS+C+ + ++ AE +L +PQ+ A YVLL ++HA+ +W V+ R M
Sbjct: 549 FGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGM 608
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
R+R VKKEPG SW++ KN+VH F+ D+SHP S I LE L S+M GY PD + +
Sbjct: 609 RDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKMAEEGYKPDVSSVL 668
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVM---LPF----------------KYISE 402
HD+ +K + + HHSEKLAIAF GLI + +P K+IS+
Sbjct: 669 HDVADADKVHMISHHSEKLAIAF-----GLIFVPQEMPIRIVKNLRVCVDCHNATKFISK 723
Query: 403 IKNREIIVRDASRFHHFRNGKCSCGDYW 430
I R+I+VRDA RFH F +G CSCGD+W
Sbjct: 724 ITGRDILVRDAVRFHKFSDGTCSCGDFW 751
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 122/228 (53%), Gaps = 4/228 (1%)
Query: 24 EGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCS 83
+ + + +LM R+ I W T++ G QNGL + LD + MR G D+ TF S++++C
Sbjct: 230 DAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACG 289
Query: 84 ELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSS 143
LA L +G+QIHA + + +V V S+L+ MYS+C + + F +++ W++
Sbjct: 290 ALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTA 349
Query: 144 MIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDL-MVKK 202
MI YG + EEA+ F +M+ + +D T S++ +C++ E+G +F L +V
Sbjct: 350 MIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSG 409
Query: 203 YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
R + + +V L G+CG +++A L M + + W L++
Sbjct: 410 LMRYITVSN--ALVTLYGKCGSIEDAHRLFDEMSFH-DQVSWTALVTG 454
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 127/299 (42%), Gaps = 40/299 (13%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN-LMRMVGF 68
S+LAH S + + E++ MP R+ +++ LI G + G + Y L+R
Sbjct: 87 SALAH----SRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESV 142
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
RP +IT ++I S L+ G +H +V++ G V S L+ MY++ G + D+ +
Sbjct: 143 RPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARR 202
Query: 129 TFLECEYSDVVL-------------------------------WSSMIAAYGFHGKGEEA 157
F E E VV+ W++M+ +G EA
Sbjct: 203 VFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEA 262
Query: 158 INLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVD 217
+++F +M + + TF S+L AC E+G + + + + + +VD
Sbjct: 263 LDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVG-SALVD 321
Query: 218 LLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQD 274
+ +C + A A+ R M + N I W ++ + ++ A R E+ G+ P D
Sbjct: 322 MYSKCRSIRLAEAVFRRMTCR-NIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDD 379
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 357 bits (917), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 179/429 (41%), Positives = 266/429 (62%), Gaps = 14/429 (3%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y + G + + K +MP R+ ++W +IAG AQ+G E+ L+ + ++ G ++ TF
Sbjct: 338 YGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATF 397
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
+S+C+++A L G+QIH + VK G V ++L++MY +CG +D++ TF E
Sbjct: 398 GCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEE 457
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
DVV W++M+A Y HG G +A+ +FE M+ + +++T V +L ACSH GL ++G E+
Sbjct: 458 KDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEY 517
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK 255
F M K Y P +HYTC++DLLGR G L+EA LIRNMP + A W LL A + H
Sbjct: 518 FYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHG 577
Query: 256 STDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWL 315
+T++ + AE + + PQ++ YVLLSN++A++ RW + R MR+ V+K PG SW+
Sbjct: 578 NTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWV 637
Query: 316 EIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKH 375
E++N++H F++GD SHP I YLEEL +M+ GYV T +HD++ EEKE+ LK+
Sbjct: 638 EVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLKY 697
Query: 376 HSEKLAIAFAEHT----RGLIVM----------LPFKYISEIKNREIIVRDASRFHHFRN 421
HSEKLA+AF T R + VM K+IS+I R II+RD+ RFHHF
Sbjct: 698 HSEKLAVAFGILTIPGGRPIRVMKNLRVCEDCHSAIKHISKIVGRLIILRDSHRFHHFNE 757
Query: 422 GKCSCGDYW 430
G CSCGDYW
Sbjct: 758 GFCSCGDYW 766
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 91/194 (46%), Gaps = 17/194 (8%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ G++L MY K GS+ E + ++V++W T++AG A++G L +
Sbjct: 424 GYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVF 483
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISS------LI 114
M+ G +PD+IT V V+S+CS L +G + + K D GVI + +I
Sbjct: 484 ESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTK-----DYGVIPTSKHYTCMI 538
Query: 115 SMYSRCGCLDDSVKTFLECEYSD-VVLWSSMIAAYGFHGK---GEEAINLFEQMEQKEFE 170
+ R G L+++ + W +++ A HG GE+A + +ME +
Sbjct: 539 DLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQ--N 596
Query: 171 ANDVTFVSLLYACS 184
+ +S LYA S
Sbjct: 597 SGMYVLLSNLYAAS 610
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 128/283 (45%), Gaps = 18/283 (6%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D ++ +++ Y + G L + ++ P R+V W +++G QNG+ ++ ++ M
Sbjct: 234 DAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEM- 292
Query: 65 MVGFRPDK--ITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
P+K +++ ++I+ + + I E+ ++ ++ +++I+ Y + G
Sbjct: 293 -----PEKNEVSYNAMIAGYVQTKKM----DIARELFESMPCRNISSWNTMITGYGQIGD 343
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
+ + K F D V W+++IA Y G EEA+N+F +++Q N TF L
Sbjct: 344 IAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALST 403
Query: 183 CSHCGLKEKGMEFFDLMVK-KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
C+ E G + VK Y + + ++ + +CG +DEA + K +
Sbjct: 404 CADIAALELGKQIHGQAVKMGYGTGCFVGN--ALLAMYFKCGSIDEANDTFEGIEEK-DV 460
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLS 282
+ W T+L+ H A + E + GV P + +LS
Sbjct: 461 VSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLS 503
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 114/250 (45%), Gaps = 22/250 (8%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E DL + + + Y+++ L + ++ LMP ++V++W +L++G AQNG ++ + ++
Sbjct: 108 ERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDN 167
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVIS--SLISMYSRC 120
M P+K + IS LA +I + + D +IS L+ + R
Sbjct: 168 M------PEK----NSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRK 217
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
L D+ F + D + W++MI+ Y G +A LF++ ++ T+ +++
Sbjct: 218 KKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDV----FTWTAMV 273
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
G+ ++ FFD M +K Y ++ + +D A L +MP + N
Sbjct: 274 SGYVQNGMLDEAKTFFDEMPEKNEVS-----YNAMIAGYVQTKKMDIARELFESMPCR-N 327
Query: 241 AIIWKTLLSA 250
W T+++
Sbjct: 328 ISSWNTMITG 337
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 108/265 (40%), Gaps = 55/265 (20%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQN---GLAEDVLDQYN 61
D++ + +M++G V MP R+ +++ +I+G +N LA ++ DQ
Sbjct: 48 DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQM- 106
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
P++ F S +V +++ Y R
Sbjct: 107 --------PERDLF----------------------------SWNV-----MLTGYVRNC 125
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
L D+ + F DVV W+S+++ Y +G +EA +F+ M +K N +++ LL
Sbjct: 126 RLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEK----NSISWNGLLA 181
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
A H G E+ F+ + L + C++ R L +A L MPV+ +A
Sbjct: 182 AYVHNGRIEEACLLFE-----SKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVR-DA 235
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEE 266
I W T++S A R+ +E
Sbjct: 236 ISWNTMISGYAQGGGLSQARRLFDE 260
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 357 bits (915), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 177/447 (39%), Positives = 269/447 (60%), Gaps = 24/447 (5%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E LV+ +++ Y K G L + + M R+V+ W +I G AQ+G+ + L +
Sbjct: 204 ERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRR 263
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M + P+++T ++V+S+C +L L G+ IH+ + G ++V V ++LI MYS+CG
Sbjct: 264 MLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGS 323
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
L+D+ F DVV W+SMI Y HG + A+ LFE+M + + D+TF+ +L A
Sbjct: 324 LEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSA 383
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
C H GL E+G FF LM KY +P++EHY C+V+LLGR G+L+EA L++NM + A+ +
Sbjct: 384 CGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPV 443
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMR 302
+W TLL C+ H + + IA+ ++ ++ YVLLSN++A+ W+GV++ R M+
Sbjct: 444 LWGTLLGCCRLHVNIKLGEEIAKFLVDQKLANSGTYVLLSNMYAATGNWEGVAKMRTLMK 503
Query: 303 ERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMH 362
E ++KE G S +E+ N+VH+F G++ HP+S EI + L E+ S +K RGY P T +H
Sbjct: 504 EHGIEKEHGCSSIEVDNKVHEFVAGERKHPKSKEIYVMLNEINSWLKARGYTPQTDVVLH 563
Query: 363 DMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEI 403
D+ E+KE +L+ HSEKLAIAF GLI P K ISEI
Sbjct: 564 DLREEQKEQSLEVHSEKLAIAF-----GLISTKPGTTVKIVKNLRVCSDCHTVMKMISEI 618
Query: 404 KNREIIVRDASRFHHFRNGKCSCGDYW 430
R+I++RD +RFHHF +G CSCGDYW
Sbjct: 619 TGRKIVMRDRNRFHHFEDGLCSCGDYW 645
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 131/303 (43%), Gaps = 42/303 (13%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
NV ++ +I Q+ L + Y+ M G P+ TF SV+ SCS L G+ +H
Sbjct: 109 NVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCS----LESGKVLH 164
Query: 96 AEVVKAGASLDVGVISSLISMYSRCG---CLDD-----------SVKTFLECEYS----- 136
+ +K G D+ V + L+ +Y+R G C S+ T L C YS
Sbjct: 165 CQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTC-YSKMGEL 223
Query: 137 -------------DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
DVV W+ MI Y G E++ LF +M + N+VT +++L AC
Sbjct: 224 DKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSAC 283
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
G E G + ++ + + T ++D+ +CG L++A + + K + +
Sbjct: 284 GQLGALESG-RWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDK-DVVA 341
Query: 244 WKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
W +++ H + A ++ EE+ G P D +LS +G S FR M
Sbjct: 342 WNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFR-LM 400
Query: 302 RER 304
R++
Sbjct: 401 RDK 403
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 91/191 (47%), Gaps = 11/191 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G ++++ G++L MY K GSL + V + ++V+AW ++I G A +G ++ L +
Sbjct: 303 GIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLF 362
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVV-KAGASLDVGVISSLISMYSR 119
M G +P ITF+ ++S+C + +G+ + K G + ++++ R
Sbjct: 363 EEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLLGR 422
Query: 120 CGCLDDS---VKTFLECEYSDVVLWSSMIAAYGFHGK---GEEAINLFEQMEQKEFEAND 173
G L+++ VK +D VLW +++ H GEE ++QK +
Sbjct: 423 AGHLEEAYGLVKNMTIA--ADPVLWGTLLGCCRLHVNIKLGEEIAKFL--VDQKLANSGT 478
Query: 174 VTFVSLLYACS 184
+S +YA +
Sbjct: 479 YVLLSNMYAAT 489
>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
Length = 1122
Score = 357 bits (915), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 178/436 (40%), Positives = 265/436 (60%), Gaps = 14/436 (3%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G++L MY K G L + ++ I+W LI G QNG E+ L ++ MR G
Sbjct: 375 GNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGL 434
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
RPD+ TF S+I + S LA +G G+Q+H+ ++++G V S L+ MY++CGCLD++++
Sbjct: 435 RPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALR 494
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
TF E + + W+++I+AY +G+ + AI +FE M F + VTF+S+L ACSH GL
Sbjct: 495 TFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGL 554
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
++ M++F LM +Y P EHY CV+D LGR G + ++ MP KA+ IIW ++L
Sbjct: 555 ADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSIL 614
Query: 249 SACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKK 308
+C+ H + ++A A+++ G+ P DA PYV+LSNI+A A +W+ + ++ MR+R V+K
Sbjct: 615 HSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRK 674
Query: 309 EPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEE 368
E G SW+EIK +++ F D + P EI L+ L EM +GY PD +H +D E
Sbjct: 675 ESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDITCALHMVDHEL 734
Query: 369 KEYNLKHHSEKLAIAFA--------------EHTRGLIVMLPFKYISEIKNREIIVRDAS 414
K +LK+HSE+LAIAFA T L K IS+I NR+IIVRD+
Sbjct: 735 KLESLKYHSERLAIAFALMNTPAGTPIRIMKNLTACLDCHAVIKMISKIVNRDIIVRDSR 794
Query: 415 RFHHFRNGKCSCGDYW 430
RFHHF++G CSCGDYW
Sbjct: 795 RFHHFKDGVCSCGDYW 810
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 135/271 (49%), Gaps = 4/271 (1%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
L++ +SL Y K L + ++ MP R+ +++ +IA A N A VL + M
Sbjct: 269 LNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREM 328
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
+ +GF + + +++S L + G+QIHA++V G + + + ++LI MYS+CG L
Sbjct: 329 QKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGML 388
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
D + F + W+++I Y +G+ EEA+ LF M + + TF S++ A
Sbjct: 389 DAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKAS 448
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
S + G + +++ K + + +VD+ +CG LDEA MP + N+I
Sbjct: 449 SSLAMIGLGRQLHSYLIRS-GYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPER-NSIS 506
Query: 244 WKTLLSACKTHKSTDMAGRIAEEIL--GVNP 272
W ++SA + A ++ E +L G NP
Sbjct: 507 WNAVISAYAHYGEAKNAIKMFEGMLHCGFNP 537
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 120/260 (46%), Gaps = 24/260 (9%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + + ++L Y K G L +V M ++ + + ++ G ++ GL L +
Sbjct: 165 GLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLF 224
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
MR G TF S+++ + +A L G Q+HA V+++ + L+V V +SL+ YS+C
Sbjct: 225 AAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKC 284
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
CLDD + F E D V ++ +IAAY ++ + LF +M++ F+ + + ++L
Sbjct: 285 DCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATML 344
Query: 181 YACS-----------HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAA 229
H L G+ DL+ ++D+ +CG LD A
Sbjct: 345 SVAGSLPDVHIGKQIHAQLVLLGLASEDLLGN------------ALIDMYSKCGMLDAAK 392
Query: 230 ALIRNMPVKANAIIWKTLLS 249
+ N K+ AI W L++
Sbjct: 393 SNFSNRSEKS-AISWTALIT 411
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 121/292 (41%), Gaps = 23/292 (7%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F L+L+ + Y SG L + + P RN W ++ A G D L +
Sbjct: 75 FSLNLILSA-----YSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFR 129
Query: 62 LMRMVGFRPDKITFVSVIS--SCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
M G PD++T +V++ C+ +H +K G V V ++L+ Y +
Sbjct: 130 AMLGEGVIPDRVTVTTVLNLPGCTV-------PSLHPFAIKFGLDTHVFVCNTLLDAYCK 182
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G L + + FLE D V +++M+ G +A+ LF M + A TF S+
Sbjct: 183 HGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSI 242
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY--TCVVDLLGRCGYLDEAAALIRNMPV 237
L + G + L++ R L + ++D +C LD+ L MP
Sbjct: 243 LTVAAGMAHLLLGHQVHALVL---RSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPE 299
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLSNIHAS 287
+ N + + +++A ++ R+ E+ LG + Q PY + ++ S
Sbjct: 300 RDN-VSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQ-VLPYATMLSVAGS 349
>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 357 bits (915), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 173/445 (38%), Positives = 268/445 (60%), Gaps = 24/445 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
+++ +++ Y+ +G + E + MP++N++ +I+G AQNG ++ L + MR
Sbjct: 358 NIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMR 417
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+ GF P F +++CS L L G+Q+HA++V G + V +++ISMY++CG ++
Sbjct: 418 LDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVE 477
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ F+ D+V W+SMIAA G HG G +AI LF+QM ++ + +TF+++L ACS
Sbjct: 478 AAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACS 537
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL EKG +F+ M++ Y P +HY +VDL R G A +I +MP K A +W
Sbjct: 538 HAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVW 597
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
+ LL+ C+ H + D+ AE++ + PQ+ YVLLSNI+A RW V++ R+ MR++
Sbjct: 598 EALLAGCRIHGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNDVAKVRKLMRDQ 657
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
V+KEP SW+E++N+VH F + D HP + + YLE+L EMK GY+PDT +HDM
Sbjct: 658 AVRKEPACSWIEVENKVHVFMVDDDVHPEVLSVYRYLEQLGLEMKKLGYIPDTKFVLHDM 717
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKN 405
+ E+KE+ L HSEKLA+ F G++ + P FK++S++
Sbjct: 718 EYEQKEHALSTHSEKLAVGF-----GIMKLPPDATVRVFKNIRICGDCHNAFKFMSKVAR 772
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
REIIVRD RFHHF+NG CSC DYW
Sbjct: 773 REIIVRDRKRFHHFKNGDCSCRDYW 797
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 135/305 (44%), Gaps = 39/305 (12%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D + +++ Y+++ L +V M AW +I+G G ++ L MR
Sbjct: 222 DELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMR 281
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVK----AGASLDVGVISSLISMYSRC 120
+G + D IT+ ++IS+C+ + + G+Q+HA ++K S + V ++LI++Y +
Sbjct: 282 FLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKNELNPNHSFCLSVSNALITLYCKN 341
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAY-------------------------------G 149
+D++ K F +++ W+++++ Y
Sbjct: 342 NKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLA 401
Query: 150 FHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRL 209
+G G+E + LF+QM FE D F L ACS G E G + +V + L
Sbjct: 402 QNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLV-HLGYESSL 460
Query: 210 EHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL- 268
++ + +CG ++ A ++ MP + + W ++++A H A + +++L
Sbjct: 461 SVGNAMISMYAKCGVVEAAESVFVTMP-SVDLVSWNSMIAALGQHGHGVKAIELFDQMLK 519
Query: 269 -GVNP 272
GV P
Sbjct: 520 EGVFP 524
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 127/295 (43%), Gaps = 53/295 (17%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPI--RNVIAWITLIAGKAQNGLAEDVLDQYNL 62
D +A ++L Y G+L G ++ P+ R+ + + +I G A NG L+ +
Sbjct: 78 DAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRA 137
Query: 63 MRMVGFRPDKITFVSVISSCSE-LATLGQGQQIHAEVVKAG-ASLDVGVISSLISMYSR- 119
MR FRPD TF SV+S+ + Q Q+H VVK G + V+++L+S+Y +
Sbjct: 138 MRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKR 197
Query: 120 -------CGCLDDSVKTFLECEYSDVVLWSSMIAAY------------------------ 148
C + + K F E D + W++MI Y
Sbjct: 198 ASELGIPCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAW 257
Query: 149 -----GFHGKG--EEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVK 201
G+ G +EA+ L +M + +D+T+ +++ AC++ G + G + ++K
Sbjct: 258 NAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILK 317
Query: 202 KYRRKPRLEHYTC------VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+ H C ++ L + +DEA + MPV+ N I W +LS
Sbjct: 318 N---ELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVR-NIITWNAILSG 368
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 90/186 (48%), Gaps = 13/186 (6%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+E L G+++ MY K G + E V MP ++++W ++IA Q+G ++ +
Sbjct: 455 GYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELF 514
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSR 119
+ M G PD+ITF++V+++CS + +G+ ++++ G + + ++ ++ R
Sbjct: 515 DQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCR 574
Query: 120 CGCLD------DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEAND 173
G DS+ + +W +++A HG + I EQ+ K ND
Sbjct: 575 AGMFSYARIVIDSMPS-----KPGAPVWEALLAGCRIHGNMDLGIEAAEQL-FKLMPQND 628
Query: 174 VTFVSL 179
T+V L
Sbjct: 629 GTYVLL 634
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 80/199 (40%), Gaps = 24/199 (12%)
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
GF+P ++ + + + +Q+ E+ + D ++LI+ Y G L+
Sbjct: 43 GFKPRGHFLNRLLEMYCKSSNVVYARQLFEEI----PNPDAIARTTLITAYCALGNLELG 98
Query: 127 VKTF--LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA-- 182
+ F D V +++MI Y +G G A+ LF M + +F +D TF S+L A
Sbjct: 99 REIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALV 158
Query: 183 --------CS--HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLG-RCGYLDEAAAL 231
C HC + + GM V L Y LG C + A L
Sbjct: 159 LFVGNEQQCGQMHCAVVKTGMG----CVSSSVLNALLSVYVKRASELGIPCSAMVSARKL 214
Query: 232 IRNMPVKANAIIWKTLLSA 250
MP K + + W T+++
Sbjct: 215 FDEMP-KRDELTWTTMITG 232
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 357 bits (915), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 175/442 (39%), Positives = 276/442 (62%), Gaps = 15/442 (3%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
L+++A +SL Y K G++ ++ + R+V+AW +I G QNGL D L+ + LM
Sbjct: 341 LNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLM 400
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
G P+ T +++S S L L G+QIHA +KAG S V ++LI+MY++ G +
Sbjct: 401 VNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNI 460
Query: 124 DDSVKTF-LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
+ + + F L ++V W+SMI A HG G+EAINLFE+M + + +T+V +L A
Sbjct: 461 NVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSA 520
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
C+H GL E+G +++++M + + +P L HY C++DL GR G L EA I +MP++ + I
Sbjct: 521 CTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNI 580
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMR 302
W +LL++CK HK+ D+A AE +L ++P ++ Y+ L+N++++ +W+ ++ R+ M+
Sbjct: 581 AWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMK 640
Query: 303 ERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMH 362
+R V+KE G+SW+ IKN+VH F + D HP+ EI + E+ E+K G++PDT + +H
Sbjct: 641 DRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYKLMAEIWEEIKKMGFIPDTESVLH 700
Query: 363 DMDSEEKEYNLKHHSEKLAIAFA----EHTRGLIVM----------LPFKYISEIKNREI 408
D++ E KE LK+HSEKLAIAF L +M K+IS++ REI
Sbjct: 701 DLEEEVKEQILKYHSEKLAIAFGLLNTPENTALRIMKNLRVCNDCHSAIKFISKLVGREI 760
Query: 409 IVRDASRFHHFRNGKCSCGDYW 430
IVRDA+RFHHF++G CSC DYW
Sbjct: 761 IVRDATRFHHFKDGSCSCRDYW 782
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 127/296 (42%), Gaps = 37/296 (12%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN-LMRMVGF 68
++L +YM+SG MP R++++W ++I+G +Q G + L ++ ++
Sbjct: 212 NALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLNEPSL 271
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG------- 121
+PD T S++S+C+ L L G+QIHA +++A V ++LISMY++ G
Sbjct: 272 KPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARL 331
Query: 122 -----------------CLDDSVK---------TFLECEYSDVVLWSSMIAAYGFHGKGE 155
LD K F + DVV W++MI Y +G
Sbjct: 332 IVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWN 391
Query: 156 EAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKK-YRRKPRLEHYTC 214
+A+ LF M + E N T ++L S + E G + +K P + +
Sbjct: 392 DALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTN--A 449
Query: 215 VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGV 270
++ + + G ++ A + K + W +++ A H A + E +L V
Sbjct: 450 LIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSV 505
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 111/218 (50%), Gaps = 7/218 (3%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L Y K G+ +++ MP + ++W +I G Q GL ++ + + M
Sbjct: 80 NTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVP 139
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P + T +V+SSC+ TL G++IH+ VVK G V V +SL++MY++CG +
Sbjct: 140 PSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVV 199
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F ++ W+++I+ Y G+ E A + FE+M ++ V++ S++ S G
Sbjct: 200 FDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDI----VSWNSMISGYSQQGYN 255
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDE 227
+ + F M+ + KP +++T + +L C L++
Sbjct: 256 LEALVIFSKMLNEPSLKP--DNFT-LASILSACANLEK 290
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 74/159 (46%), Gaps = 9/159 (5%)
Query: 66 VGFRPDKITFVS-VISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
VG P F + ++ + + G+ +H +++K G L V ++++L++ Y++ G L
Sbjct: 3 VGNSPTSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLR 62
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ F E W+++I+ Y G E + L +M + + V++ +++ +
Sbjct: 63 FAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMP----DCDPVSWTAIIVGYN 118
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCG 223
GL + + F M+ + R P +T V ++L C
Sbjct: 119 QFGLFDNAIWMFAKMISE-RVPP--SQFT-VSNVLSSCA 153
>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330-like [Cucumis
sativus]
Length = 712
Score = 357 bits (915), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 177/444 (39%), Positives = 267/444 (60%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + D+ SSL MY K + + +V L+ R+ I+W ++IAG QNGL ++ L +
Sbjct: 269 GLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFF 328
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M M +P +F S++ +C+ L TL G+Q+H + + G ++ + SSL+ MY++C
Sbjct: 329 RQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKC 388
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + + F D+V W++MI HG+ +AI LFEQME + + N V F+++L
Sbjct: 389 GNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVL 448
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL ++ ++F+ M + + P +EHY V DLLGR G L+EA I M +
Sbjct: 449 TACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPT 508
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
IW TLLSAC+ H + DMA ++A IL V+P + Y+LL+NI+++A+RW+ +++R +
Sbjct: 509 GSIWATLLSACRVHXNIDMAEKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRAS 568
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
MR ++K P SW+E+KN+V+ F GD+SHP +I +E L M+ GYVPDT
Sbjct: 569 MRRIGIRKTPACSWIEVKNKVYAFMAGDESHPCYEKIREAMEVLVELMEKEGYVPDTSEV 628
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA----------EHTRGLIVM----LPFKYISEIKNR 406
HD++ E+K+Y + HSE+LAI F T+ L V K+IS+I R
Sbjct: 629 HHDVEEEQKKYLVCSHSERLAIVFGIINTPAGMTIRVTKNLRVCTDCHTATKFISKIVGR 688
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EI+VRD SRFHHF+NG CSCGDYW
Sbjct: 689 EIVVRDNSRFHHFKNGTCSCGDYW 712
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 142/316 (44%), Gaps = 36/316 (11%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVE--------GE------------------------KV 28
G + DL G++L +MY K L E GE K+
Sbjct: 136 GLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKI 195
Query: 29 IRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATL 88
+MP +++++W T+IAG A+NGL E+ L M +PD T SV+ +E +
Sbjct: 196 FEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDI 255
Query: 89 GQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAY 148
+G++IH ++ G D+ V SSLI MY++C + DS + F D + W+S+IA
Sbjct: 256 SRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGC 315
Query: 149 GFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPR 208
+G +E + F QM + + +F S++ AC+H G + + + +
Sbjct: 316 VQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDE-N 374
Query: 209 LEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAE--E 266
+ + +VD+ +CG + A + M ++ + + W ++ C H A + E E
Sbjct: 375 IFIASSLVDMYAKCGNIRTAKQIFDRMRLR-DMVSWTAMIMGCALHGQAPDAIELFEQME 433
Query: 267 ILGVNPQDAAPYVLLS 282
G+ P A +L+
Sbjct: 434 TEGIKPNHVAFMAVLT 449
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/263 (19%), Positives = 108/263 (41%), Gaps = 34/263 (12%)
Query: 38 IAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAE 97
+AW ++I +GL L + M G PD F SV+ SC+ L L G+ +H
Sbjct: 72 LAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGY 131
Query: 98 VVKAGASLDVGVISSLISMYSRCGCL-------------------------------DDS 126
+++ G D+ ++L++MYS+ L +DS
Sbjct: 132 IIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDS 191
Query: 127 VKTFLE-CEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
V+ E D+V W+++IA +G EE + + +M + + T S+L +
Sbjct: 192 VRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAE 251
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
+G E +++ + + ++D+ +C + ++ + + + + I W
Sbjct: 252 NVDISRGKEIHGCSIRQ-GLDADIYVASSLIDMYAKCTRVADSCRVF-TLLTERDGISWN 309
Query: 246 TLLSACKTHKSTDMAGRIAEEIL 268
++++ C + D R ++L
Sbjct: 310 SIIAGCVQNGLFDEGLRFFRQML 332
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 90 QGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYG 149
Q QQ+HA+V+K AS +S L+S+YS L DS++ F + + W S+I Y
Sbjct: 24 QAQQLHAQVLKFQASSLC-NLSLLLSIYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYT 82
Query: 150 FHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
HG +++ F M + F S+L +C+
Sbjct: 83 SHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCA 117
>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Glycine max]
Length = 815
Score = 357 bits (915), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 170/441 (38%), Positives = 277/441 (62%), Gaps = 15/441 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
+++ G+SL MY K E ++ + ++ + W LI+G Q GL ED L + M
Sbjct: 375 EVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMH 434
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
D T+ S++ +C+ LA+L G+Q+H+ ++++G +V S+L+ MY++CG +
Sbjct: 435 RAKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIK 494
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
++++ F E + V W+++I+AY +G G A+ FEQM + N V+F+S+L ACS
Sbjct: 495 EALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACS 554
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
HCGL E+G+++F+ M + Y+ +PR EHY +VD+L R G DEA L+ MP + + I+W
Sbjct: 555 HCGLVEEGLQYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIMW 614
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNP-QDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
++L++C+ HK+ ++A + A+++ + +DAAPYV +SNI+A+A W V + ++A+RE
Sbjct: 615 SSILNSCRIHKNQELAIKAADQLFNMKGLRDAAPYVSMSNIYAAAGEWDSVGKVKKALRE 674
Query: 304 RNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHD 363
R ++K P SW+EIK + H F+ D SHP++ EI L+EL +M+ +GY PD+ +H+
Sbjct: 675 RGIRKVPAYSWVEIKQKTHVFSANDTSHPQTKEITRKLDELEKQMEEQGYKPDSTCALHN 734
Query: 364 MDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNREII 409
+D E K +LK+HSE++AIAFA +G +++ K IS+I NREI
Sbjct: 735 VDEEVKVESLKYHSERIAIAFALISTPKGSPILVMKNLRACNDCHAAIKVISKIVNREIT 794
Query: 410 VRDASRFHHFRNGKCSCGDYW 430
VRD+SRFHHF +G CSC DYW
Sbjct: 795 VRDSSRFHHFTDGSCSCKDYW 815
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 139/283 (49%), Gaps = 4/283 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
F ++ ++L Y K +VE K+ MP + I++ LI A NG E+ L+ +
Sbjct: 270 NFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLELF 329
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
++ F + F +++S + L G+QIH++ + A +V V +SL+ MY++C
Sbjct: 330 RELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKC 389
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
++ + F + + V W+++I+ Y G E+ + LF +M + + A+ T+ S+L
Sbjct: 390 DKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASIL 449
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC++ G + +++ + +VD+ +CG + EA + + MPV+ N
Sbjct: 450 RACANLASLTLGKQLHSRIIRSGCLSNVFSG-SALVDMYAKCGSIKEALQMFQEMPVR-N 507
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLL 281
++ W L+SA + A R E+++ G+ P + +L
Sbjct: 508 SVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSIL 550
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 123/266 (46%), Gaps = 14/266 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
++++ +++ Y+KSG+L + M R+V+ W LI G AQ+ + + + M
Sbjct: 72 NVISTNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMC 131
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G PD IT +++S +E ++ + Q+H VVK G + V +SL+ Y + L
Sbjct: 132 RHGMVPDHITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLG 191
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ F D V +++++ Y G +AINLF +M+ F ++ TF ++L A
Sbjct: 192 LACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTA-- 249
Query: 185 HCGLKEKGMEF---FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
G++ +EF V K + ++D + + EA L MP + +
Sbjct: 250 --GIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMP-EVDG 306
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEI 267
I + L++ C + GR+ E +
Sbjct: 307 ISYNVLITCCAWN------GRVEESL 326
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 125/250 (50%), Gaps = 2/250 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G++ L+ +SL Y K+ SL + + M ++ + + L+ G ++ G D ++ +
Sbjct: 169 GYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLF 228
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ +GFRP + TF +V+++ ++ + GQQ+H+ VVK +V V ++L+ YS+
Sbjct: 229 FKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKH 288
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
+ ++ K F E D + ++ +I ++G+ EE++ LF +++ F+ F +LL
Sbjct: 289 DRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLL 348
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
++ E G + + L + +VD+ +C EA + ++ ++
Sbjct: 349 SIAANSLNLEMGRQIHSQAIVTDAISEVLVGNS-LVDMYAKCDKFGEANRIFADLAHQS- 406
Query: 241 AIIWKTLLSA 250
++ W L+S
Sbjct: 407 SVPWTALISG 416
>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 357 bits (915), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 173/445 (38%), Positives = 268/445 (60%), Gaps = 24/445 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
+++ +++ Y+ +G + E + MP++N++ +I+G AQNG ++ L + MR
Sbjct: 358 NIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMR 417
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+ GF P F +++CS L L G+Q+HA++V G + V +++ISMY++CG ++
Sbjct: 418 LDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVE 477
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ F+ D+V W+SMIAA G HG G +AI LF+QM ++ + +TF+++L ACS
Sbjct: 478 AAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACS 537
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL EKG +F+ M++ Y P +HY +VDL R G A +I +MP K A +W
Sbjct: 538 HAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVW 597
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
+ LL+ C+ H + D+ AE++ + PQ+ YVLLSNI+A RW V++ R+ MR++
Sbjct: 598 EALLAGCRIHGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNEVAKVRKLMRDQ 657
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
V+KEP SW+E++N+VH F + D HP + + YLE+L EMK GY+PDT +HDM
Sbjct: 658 AVRKEPACSWIEVENKVHVFMVDDDVHPEVLSVYRYLEQLGLEMKKLGYIPDTKFVLHDM 717
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKN 405
+ E+KE+ L HSEKLA+ F G++ + P FK++S++
Sbjct: 718 EYEQKEHALSTHSEKLAVGF-----GIMKLPPGATVRVFKNIRICGDCHNAFKFMSKVAR 772
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
REIIVRD RFHHF+NG CSC DYW
Sbjct: 773 REIIVRDRKRFHHFKNGDCSCRDYW 797
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 135/305 (44%), Gaps = 39/305 (12%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D + +++ Y+++ L +V M AW +I+G G ++ L MR
Sbjct: 222 DELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMR 281
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVK----AGASLDVGVISSLISMYSRC 120
+G + D IT+ ++IS+C+ + + G+Q+HA ++K S + V ++LI++Y +
Sbjct: 282 FLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLYCKN 341
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAY-------------------------------G 149
+D++ K F +++ W+++++ Y
Sbjct: 342 NKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLA 401
Query: 150 FHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRL 209
+G G+E + LF+QM FE D F L ACS G E G + +V + L
Sbjct: 402 QNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLV-HLGYESSL 460
Query: 210 EHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL- 268
++ + +CG ++ A ++ MP + + W ++++A H A + +++L
Sbjct: 461 SVGNAMISMYAKCGVVEAAESVFVTMP-SVDLVSWNSMIAALGQHGHGVKAIELFDQMLK 519
Query: 269 -GVNP 272
GV P
Sbjct: 520 EGVFP 524
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 127/295 (43%), Gaps = 53/295 (17%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPI--RNVIAWITLIAGKAQNGLAEDVLDQYNL 62
D +A ++L Y G+L G ++ P+ R+ + + +I G A NG L+ +
Sbjct: 78 DAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRA 137
Query: 63 MRMVGFRPDKITFVSVISSCSE-LATLGQGQQIHAEVVKAG-ASLDVGVISSLISMYSR- 119
MR FRPD TF SV+S+ + Q Q+H VVK G + V+++L+S+Y +
Sbjct: 138 MRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKR 197
Query: 120 -------CGCLDDSVKTFLECEYSDVVLWSSMIAAY------------------------ 148
C + + K F E D + W++MI Y
Sbjct: 198 ASELGISCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAW 257
Query: 149 -----GFHGKG--EEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVK 201
G+ G +EA+ L +M + +D+T+ +++ AC++ G + G + ++K
Sbjct: 258 NAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILK 317
Query: 202 KYRRKPRLEHYTC------VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+ H C ++ L + +DEA + MPV+ N I W +LS
Sbjct: 318 N---ELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVR-NIITWNAILSG 368
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 90/186 (48%), Gaps = 13/186 (6%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+E L G+++ MY K G + E V MP ++++W ++IA Q+G ++ +
Sbjct: 455 GYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELF 514
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSR 119
+ M G PD+ITF++V+++CS + +G+ ++++ G + + ++ ++ R
Sbjct: 515 DQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCR 574
Query: 120 CGCLD------DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEAND 173
G DS+ + +W +++A HG + I EQ+ K ND
Sbjct: 575 AGMFSYARIVIDSMPS-----KPGAPVWEALLAGCRIHGNMDLGIEAAEQL-FKLMPQND 628
Query: 174 VTFVSL 179
T+V L
Sbjct: 629 GTYVLL 634
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 114/292 (39%), Gaps = 38/292 (13%)
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
GF+P ++ + + L +Q+ E+ + D ++LI+ Y G L+
Sbjct: 43 GFKPRGHFLNRLLEMYCKSSNLVYARQLFEEI----PNPDAIARTTLITAYCALGNLELG 98
Query: 127 VKTF--LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA-- 182
+ F D V +++MI Y +G G A+ LF M + +F +D TF S+L A
Sbjct: 99 REIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALV 158
Query: 183 --------CS--HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLG-RCGYLDEAAAL 231
C HC + + GM V L Y LG C + A L
Sbjct: 159 LFVGNEQQCGQMHCAVVKTGMG----CVSSSVLNALLSVYVKRASELGISCSAMVSARKL 214
Query: 232 IRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSN-IHASA-- 288
MP K + + W T+++ + + A + E + V AA ++S +H
Sbjct: 215 FDEMP-KRDELTWTTMITGYVRNDDLNGAREVFEAM--VENLGAAWNAMISGYVHCGCFQ 271
Query: 289 --------KRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHP 332
R+ G+ +F + + V ++ QVH + + ++ +P
Sbjct: 272 EALTLCRKMRFLGI-QFDDITYTTIISACANVGSFQMGKQVHAYILKNELNP 322
>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 573
Score = 357 bits (915), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 182/449 (40%), Positives = 278/449 (61%), Gaps = 25/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D +SL MY K + + +++ M ++++ W +I A E ++ +
Sbjct: 131 GLLSDHFVCASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADCNAYESLV-LF 189
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ MR G PDK+ V+V+++C++L + + + + +V+ G SLDV + +++I MY++C
Sbjct: 190 DRMREEGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKC 249
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ + + F + +V+ WS+MIAAYG+HG+G++AI+LF M N VTFVSLL
Sbjct: 250 GSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLL 309
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
YACSH GL E+G+ FF+ M +++ +P ++HYTC+VDLLGR G LDEA LI M V+ +
Sbjct: 310 YACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKD 369
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+W LL AC+ H ++A + A +L + PQ+ YVLLSNI+A A +W+ V++FR+
Sbjct: 370 ERLWSALLGACRIHSKMELAEKAANSLLELQPQNPGHYVLLSNIYAKAGKWEKVAKFRDM 429
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M +R +KK PG +W+E+ N+ +QF++GD+SHP+S EI L L ++++ GYVPDT
Sbjct: 430 MTQRKLKKIPGWTWIEVDNKTYQFSVGDRSHPQSKEIYEMLMSLIKKLEMAGYVPDTDFV 489
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVML---PF----------------KYIS 401
+ D++ E K+ L HSEKLAIAF GLI + P K +S
Sbjct: 490 LQDVEEEVKQEMLYTHSEKLAIAF-----GLIAIPEGEPIRISKNLRVCGDCHTFSKMVS 544
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
I R IIVRDA+RFHHF +G CSCGDYW
Sbjct: 545 SIMRRSIIVRDANRFHHFNDGTCSCGDYW 573
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 118/251 (47%), Gaps = 5/251 (1%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
DLV + L + Y + ++ + + + +R+ W ++ G A+ G + +
Sbjct: 34 DLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKAGDHAGCYATFRELL 93
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G PD T VI +C + L G+ IH V+K G D V +SL+ MY++C ++
Sbjct: 94 RCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVCASLVDMYAKCIVVE 153
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D+ + F D+V W+ MI AY E++ LF++M ++ + V V+++ AC+
Sbjct: 154 DAQRLFERMLSKDLVTWTVMIGAYA-DCNAYESLVLFDRMREEGVVPDKVAMVTVVNACA 212
Query: 185 HCGLKEKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
G + D +V+ + L T ++D+ +CG ++ A + M K N I
Sbjct: 213 KLGAMHRARFANDYIVRNGFSLDVILG--TAMIDMYAKCGSVESAREVFDRMKEK-NVIS 269
Query: 244 WKTLLSACKTH 254
W +++A H
Sbjct: 270 WSAMIAAYGYH 280
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 90/203 (44%), Gaps = 14/203 (6%)
Query: 92 QQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFH 151
+Q+HA VV G D+ + + L+ Y++ +DD+ F D WS M+ +
Sbjct: 20 RQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKA 79
Query: 152 GKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEH 211
G F ++ + ++ T ++ C + G D+++K +H
Sbjct: 80 GDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLS---DH 136
Query: 212 YTC--VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA---CKTHKSTDMAGRIAEE 266
+ C +VD+ +C +++A L M K + + W ++ A C ++S + R+ EE
Sbjct: 137 FVCASLVDMYAKCIVVEDAQRLFERMLSK-DLVTWTVMIGAYADCNAYESLVLFDRMREE 195
Query: 267 ILGVNPQDAAPYVLLSNIHASAK 289
GV P A +++ ++A AK
Sbjct: 196 --GVVPDKVA---MVTVVNACAK 213
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 175/442 (39%), Positives = 276/442 (62%), Gaps = 15/442 (3%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
L+++A +SL Y K G++ ++ + R+V+AW +I G QNGL D L+ + LM
Sbjct: 341 LNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLM 400
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
G P+ T +++S S L L G+QIHA +KAG S V ++LI+MY++ G +
Sbjct: 401 VNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNI 460
Query: 124 DDSVKTF-LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
+ + + F L ++V W+SMI A HG G+EAINLFE+M + + +T+V +L A
Sbjct: 461 NVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSA 520
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
C+H GL E+G +++++M + + +P L HY C++DL GR G L EA I +MP++ + I
Sbjct: 521 CTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNI 580
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMR 302
W +LL++CK HK+ D+A AE +L ++P ++ Y+ L+N++++ +W+ ++ R+ M+
Sbjct: 581 AWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMK 640
Query: 303 ERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMH 362
+R V+KE G+SW+ IKN+VH F + D HP+ EI + E+ E+K G++PDT + +H
Sbjct: 641 DRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYKLMAEIWEEIKKMGFIPDTESVLH 700
Query: 363 DMDSEEKEYNLKHHSEKLAIAFA----EHTRGLIVM----------LPFKYISEIKNREI 408
D++ E KE LK+HSEKLAIAF L +M K+IS++ REI
Sbjct: 701 DLEEEVKEQILKYHSEKLAIAFGLLNTPENTALRIMKNLRVCNDCHSAIKFISKLVGREI 760
Query: 409 IVRDASRFHHFRNGKCSCGDYW 430
IVRDA+RFHHF++G CSC DYW
Sbjct: 761 IVRDATRFHHFKDGSCSCRDYW 782
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 127/296 (42%), Gaps = 37/296 (12%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN-LMRMVGF 68
++L +YM+SG MP R++++W ++I+G +Q G + L ++ ++
Sbjct: 212 NALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKMLNEPSL 271
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG------- 121
+PD T S++S+C+ L L G+QIHA +++A V ++LISMY++ G
Sbjct: 272 KPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARL 331
Query: 122 -----------------CLDDSVK---------TFLECEYSDVVLWSSMIAAYGFHGKGE 155
LD K F + DVV W++MI Y +G
Sbjct: 332 IVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWN 391
Query: 156 EAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKK-YRRKPRLEHYTC 214
+A+ LF M + E N T ++L S + E G + +K P + +
Sbjct: 392 DALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTN--A 449
Query: 215 VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGV 270
++ + + G ++ A + K + W +++ A H A + E +L V
Sbjct: 450 LIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSV 505
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 111/218 (50%), Gaps = 7/218 (3%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L Y K G+ +++ MP + ++W +I G Q GL ++ + + M
Sbjct: 80 NTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVP 139
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P + T +V+SSC+ TL G++IH+ VVK G V V +SL++MY++CG +
Sbjct: 140 PSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVV 199
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F ++ W+++I+ Y G+ E A + FE+M ++ V++ S++ S G
Sbjct: 200 FDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDI----VSWNSMISGYSQQGYN 255
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDE 227
+ + F M+ + KP +++T + +L C L++
Sbjct: 256 LEALAIFSKMLNEPSLKP--DNFT-LASILSACANLEK 290
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 74/159 (46%), Gaps = 9/159 (5%)
Query: 66 VGFRPDKITFVS-VISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
VG P F + ++ + + G+ +H +++K G L V ++++L++ Y++ G L
Sbjct: 3 VGNSPTSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLR 62
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ F E W+++I+ Y G E + L +M + + V++ +++ +
Sbjct: 63 FAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMP----DCDPVSWTAIIVGYN 118
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCG 223
GL + + F M+ + R P +T V ++L C
Sbjct: 119 QFGLFDNAIWMFAKMISE-RVPP--SQFT-VSNVLSSCA 153
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 174/443 (39%), Positives = 275/443 (62%), Gaps = 15/443 (3%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
+LD++A ++L + Y+K G + ++ + +V+AW +I G QNGL D ++ +
Sbjct: 305 DLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKT 364
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M G RP+ T +++S+ S + +L G+QIHA +++G +L V ++L +MY++ G
Sbjct: 365 MVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGS 424
Query: 123 LDDSVKTF-LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
++ + K F L + D V W+SMI A HG GEEAI LFEQM + + +T+V +L
Sbjct: 425 INGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLS 484
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
AC+H GL E+G +FDLM ++ P L HY C+VDL GR G L EA + NMP++ +
Sbjct: 485 ACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDV 544
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
I W +LLS+CK +K+ D+A AE +L + P ++ Y L+N+++S +W ++ R+ M
Sbjct: 545 IAWGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGKWDDAAKIRKLM 604
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
+ R VKKE G+SW++I+N+ H F + D HP+ EI ++++ E+K G+ PDT + +
Sbjct: 605 KARGVKKEQGLSWVQIQNKTHVFGVEDGLHPQKDEIYKMMDKIWKEIKKMGFAPDTESVL 664
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFA-----EHTRGLIVM---------LPFKYISEIKNRE 407
HD++ E K+ L++HSEKLAIAF E+T I+ K+IS++ +RE
Sbjct: 665 HDLEVEVKDQILRYHSEKLAIAFGIISTPENTTLRIMKNLRVCNDCHNAIKFISKLVDRE 724
Query: 408 IIVRDASRFHHFRNGKCSCGDYW 430
IIVRDA+RFHHF++G CSC DYW
Sbjct: 725 IIVRDATRFHHFKDGSCSCKDYW 747
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 137/275 (49%), Gaps = 16/275 (5%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y K G L + +V L+P+R+ ++W T+I G Q G ED + + M P + T
Sbjct: 51 YAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTL 110
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
+V++SC+ + G G+++H+ VVK G V V +SL++MY++ G L + F +
Sbjct: 111 TNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKL 170
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
+ W++MI+ + G+ + A+ FE + +++ V++ S++ C+ G + ++F
Sbjct: 171 RNTSSWNAMISLHMNCGRVDLALAQFELLSERDI----VSWNSMIAGCNQHGFDNEALQF 226
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAA-------ALIRNMPVKANAIIWKTLL 248
F ++K KP + ++ + L C L++ + ++R M A+ + L+
Sbjct: 227 FSSILKDTSLKP--DRFS-LASALSACANLEKLSFGKQIHGYIVRTM-FDASGAVGNALI 282
Query: 249 SACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSN 283
S ++A RI E+ G++ D + L N
Sbjct: 283 SMYAKSGGVEIARRIIEQS-GISDLDVIAFTALLN 316
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 134/307 (43%), Gaps = 40/307 (13%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN-LMRMVGF 68
+++ ++M G + L+ R++++W ++IAG Q+G + L ++ +++
Sbjct: 177 NAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSL 236
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVK-----AGA-------------------- 103
+PD+ + S +S+C+ L L G+QIH +V+ +GA
Sbjct: 237 KPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARR 296
Query: 104 --------SLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGE 155
LDV ++L++ Y + G + + + F + DVV W++MI Y +G
Sbjct: 297 IIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNN 356
Query: 156 EAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRR-KPRLEHYTC 214
+AI +F+ M + N T ++L A S G + ++ P + +
Sbjct: 357 DAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGN--A 414
Query: 215 VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNP 272
+ + + G ++ A + + + + W +++ A H + A + E++ LG+ P
Sbjct: 415 LTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKP 474
Query: 273 QDAAPYV 279
D YV
Sbjct: 475 -DHITYV 480
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 67/145 (46%), Gaps = 14/145 (9%)
Query: 111 SSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFE 170
++++S Y++ G L+ + + F D V W+++I Y G+ E+AI +F M + +
Sbjct: 45 NTILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVL 104
Query: 171 ANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV------VDLLGRCGY 224
T ++L +C+ G + G + +VK L + CV +++ + G
Sbjct: 105 PTQFTLTNVLASCAATGSRGIGKKVHSFVVK-------LGLHACVPVANSLLNMYAKTGD 157
Query: 225 LDEAAALIRNMPVKANAIIWKTLLS 249
L A + M ++ N W ++S
Sbjct: 158 LKMAKVVFDRMKLR-NTSSWNAMIS 181
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 75/154 (48%), Gaps = 13/154 (8%)
Query: 98 VVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEA 157
+VK G + V ++++L+++Y++ G D+ F E W+++++ Y GK E+A
Sbjct: 1 MVKLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKA 60
Query: 158 INLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVD 217
+F+ + ++ V++ +++ + G E ++ F MVK K +T + +
Sbjct: 61 HQVFDLIPVRD----SVSWTTIIVGYNQMGRFEDAIKIFVDMVKD---KVLPTQFT-LTN 112
Query: 218 LLGRCGYLDEAAALIRNMPVKANAIIWKTLLSAC 251
+L C AA R + K ++ + K L AC
Sbjct: 113 VLASC-----AATGSRGIGKKVHSFVVKLGLHAC 141
>gi|20197649|gb|AAM15176.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 472
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 173/445 (38%), Positives = 283/445 (63%), Gaps = 16/445 (3%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
+E G++L Y+K G + E KV + ++++AW ++AG AQ G E + +
Sbjct: 28 YERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFG 87
Query: 62 LMRMVGFRPDKITFVSVISSCSEL-ATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ G +P++ TF S+++ C+ A++GQG+Q H +K+ + V S+L++MY++
Sbjct: 88 ELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKK 147
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ + + F D+V W+SMI+ Y HG+ +A+++F++M++++ + + VTF+ +
Sbjct: 148 GNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVF 207
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+H GL E+G ++FD+MV+ + P EH +C+VDL R G L++A +I NMP A
Sbjct: 208 AACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAG 267
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+ IW+T+L+AC+ HK T++ AE+I+ + P+D+A YVLLSN++A + WQ ++ R+
Sbjct: 268 STIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKL 327
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M ERNVKKEPG SW+E+KN+ + F GD+SHP +I + LE+L++ +K GY PDT
Sbjct: 328 MNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYV 387
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA-----EHTRGLIVM---------LPFKYISEIKNR 406
+ D+D E KE L HSE+LAIAF + + LI+ L K I++I+ R
Sbjct: 388 LQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEER 447
Query: 407 EIIVRDASRFHHF-RNGKCSCGDYW 430
EI+VRD++RFHHF +G CSCGD+W
Sbjct: 448 EIVVRDSNRFHHFSSDGVCSCGDFW 472
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 82/167 (49%), Gaps = 11/167 (6%)
Query: 93 QIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHG 152
++HA+VVK V ++L+ Y + G ++++ K F + D+V WS+M+A Y G
Sbjct: 18 EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTG 77
Query: 153 KGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK-EKGMEFFDLMVKKYRRKPRLEH 211
+ E AI +F ++ + + N+ TF S+L C+ +G +F +K RL+
Sbjct: 78 ETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKS-----RLDS 132
Query: 212 YTCV----VDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
CV + + + G ++ A + + K + + W +++S H
Sbjct: 133 SLCVSSALLTMYAKKGNIESAEEVFKRQREK-DLVSWNSMISGYAQH 178
>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
Length = 810
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 178/436 (40%), Positives = 265/436 (60%), Gaps = 14/436 (3%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G++L MY K G L + ++ I+W LI G QNG E+ L ++ MR G
Sbjct: 375 GNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGL 434
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
RPD+ TF S+I + S LA +G G+Q+H+ ++++G V S L+ MY++CGCLD++++
Sbjct: 435 RPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALR 494
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
TF E + + W+++I+AY +G+ + AI +FE M F + VTF+S+L ACSH GL
Sbjct: 495 TFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGL 554
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
++ M++F LM +Y P EHY CV+D LGR G + ++ MP KA+ IIW ++L
Sbjct: 555 ADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSIL 614
Query: 249 SACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKK 308
+C+ H + ++A A+++ G+ P DA PYV+LSNI+A A +W+ + ++ MR+R V+K
Sbjct: 615 HSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRK 674
Query: 309 EPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEE 368
E G SW+EIK +++ F D + P EI L+ L EM +GY PD +H +D E
Sbjct: 675 ESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDITCALHMVDHEL 734
Query: 369 KEYNLKHHSEKLAIAFA--------------EHTRGLIVMLPFKYISEIKNREIIVRDAS 414
K +LK+HSE+LAIAFA T L K IS+I NR+IIVRD+
Sbjct: 735 KLESLKYHSERLAIAFALMNTPAGTPIRIMKNLTACLDCHAVIKMISKIVNRDIIVRDSR 794
Query: 415 RFHHFRNGKCSCGDYW 430
RFHHF++G CSCGDYW
Sbjct: 795 RFHHFKDGVCSCGDYW 810
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 135/271 (49%), Gaps = 4/271 (1%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
L++ +SL Y K L + ++ MP R+ +++ +IA A N A VL + M
Sbjct: 269 LNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREM 328
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
+ +GF + + +++S L + G+QIHA++V G + + + ++LI MYS+CG L
Sbjct: 329 QKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGML 388
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
D + F + W+++I Y +G+ EEA+ LF M + + TF S++ A
Sbjct: 389 DAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKAS 448
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
S + G + +++ K + + +VD+ +CG LDEA MP + N+I
Sbjct: 449 SSLAMIGLGRQLHSYLIRS-GYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPER-NSIS 506
Query: 244 WKTLLSACKTHKSTDMAGRIAEEIL--GVNP 272
W ++SA + A ++ E +L G NP
Sbjct: 507 WNAVISAYAHYGEAKNAIKMFEGMLHCGFNP 537
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 120/260 (46%), Gaps = 24/260 (9%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + + ++L Y K G L +V M ++ + + ++ G ++ GL L +
Sbjct: 165 GLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLF 224
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
MR G TF S+++ + +A L G Q+HA V+++ + L+V V +SL+ YS+C
Sbjct: 225 AAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKC 284
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
CLDD + F E D V ++ +IAAY ++ + LF +M++ F+ + + ++L
Sbjct: 285 DCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATML 344
Query: 181 YACS-----------HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAA 229
H L G+ DL+ ++D+ +CG LD A
Sbjct: 345 SVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNA------------LIDMYSKCGMLDAAK 392
Query: 230 ALIRNMPVKANAIIWKTLLS 249
+ N K+ AI W L++
Sbjct: 393 SNFSNRSEKS-AISWTALIT 411
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 121/292 (41%), Gaps = 23/292 (7%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F L+L+ + Y SG L + + P RN W ++ A G D L +
Sbjct: 75 FSLNLILSA-----YSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFR 129
Query: 62 LMRMVGFRPDKITFVSVIS--SCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
M G PD++T +V++ C+ +H +K G V V ++L+ Y +
Sbjct: 130 AMLGEGVIPDRVTVTTVLNLPGCTV-------PSLHPFAIKFGLDTHVFVCNTLLDAYCK 182
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G L + + FLE D V +++M+ G +A+ LF M + A TF S+
Sbjct: 183 HGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSI 242
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY--TCVVDLLGRCGYLDEAAALIRNMPV 237
L + G + L++ R L + ++D +C LD+ L MP
Sbjct: 243 LTVAAGMAHLLLGHQVHALVL---RSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPE 299
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLSNIHAS 287
+ N + + +++A ++ R+ E+ LG + Q PY + ++ S
Sbjct: 300 RDN-VSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQ-VLPYATMLSVAGS 349
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 356 bits (913), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 187/450 (41%), Positives = 277/450 (61%), Gaps = 20/450 (4%)
Query: 1 GFELDLVAGSSLAHMYMK-SGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNG-LAEDVLD 58
GF + GS L +Y K G + + KV + +++ W T+++G +QN ED L+
Sbjct: 270 GFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALE 329
Query: 59 QYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAG-ASLDVGVISSLISMY 117
+ M+ +G+RP+ +FV VIS+CS L++ QG+QIH+ +K+ S + V ++LI+MY
Sbjct: 330 CFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMY 389
Query: 118 SRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
S+CG L D+ + F + V +SMIA Y HG E+++LF+ M +++ +TF+
Sbjct: 390 SKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFI 449
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
S+L AC+H G E+G +F++M +K+ +P EHY+C++DLLGR G L EA LI MP
Sbjct: 450 SVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPF 509
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEF 297
+I W +LL AC+TH + ++A + A ++L + P +AAPYV+LSN++ASA RW+ V+
Sbjct: 510 NPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATV 569
Query: 298 REAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDT 357
R+ MR+R VKK+PG SW+E+K ++H F D SHP EI +LEE++ +MK GYVPD
Sbjct: 570 RKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPDV 629
Query: 358 GADMHDMDSE---EKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYI 400
+ D EKE L HHSEKLA+AF G V++ K+I
Sbjct: 630 RWALVKDDGTRGGEKEIRLGHHSEKLAVAFGLISTKDGEPVLVVKNLRICGDCHNAIKFI 689
Query: 401 SEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
S I REI VRDA RFH F+ G+CSCGDYW
Sbjct: 690 SAIAGREITVRDAHRFHCFKEGQCSCGDYW 719
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 126/257 (49%), Gaps = 4/257 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMP-IRNVIAWITLIAGKAQNGLAEDVLDQ 59
GF+ + ++L Y K+G L + ++V M IR+ ++W ++I Q+ L
Sbjct: 168 GFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGL 227
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ M G D T SV+++ + L L G Q H +++K G + V S LI +YS+
Sbjct: 228 FQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSK 287
Query: 120 C-GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKG-EEAINLFEQMEQKEFEANDVTFV 177
C G + D K F E D+VLW++M++ Y + + E+A+ F QM+ + ND +FV
Sbjct: 288 CGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFV 347
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
++ ACS+ +G + L +K R+ ++ + +CG L +A L M
Sbjct: 348 CVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRM-A 406
Query: 238 KANAIIWKTLLSACKTH 254
+ N + ++++ H
Sbjct: 407 EHNTVSLNSMIAGYAQH 423
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 117/237 (49%), Gaps = 6/237 (2%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y K + ++ +P +++++ TLI+ A G L ++ MR +G D T
Sbjct: 84 YAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDGFTL 143
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLEC-E 134
+VI++C + +G Q+H+ V +G V V ++L++ Y + G LDD+ + F
Sbjct: 144 SAVITACCD--DVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGG 201
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGME 194
D V W+SMI AYG H +G +A+ LF++M ++ + T S+L A + G++
Sbjct: 202 IRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQ 261
Query: 195 FFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
F ++K + + + + ++DL +CG + + + ++W T++S
Sbjct: 262 FHGQLIKTGFHQNSHVG--SGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSG 316
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 59/125 (47%), Gaps = 4/125 (3%)
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
F ++ +C L G+ +H+ +K+ + I +YS+CG L + K F +
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGME 194
+V ++++IAAY + A LF+Q+ + + V++ +L+ A + CG +
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDL----VSYNTLISAYADCGETAPALG 126
Query: 195 FFDLM 199
F M
Sbjct: 127 LFSGM 131
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 356 bits (913), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 187/450 (41%), Positives = 277/450 (61%), Gaps = 20/450 (4%)
Query: 1 GFELDLVAGSSLAHMYMK-SGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNG-LAEDVLD 58
GF + GS L +Y K G + + KV + +++ W T+++G +QN ED L+
Sbjct: 270 GFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALE 329
Query: 59 QYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAG-ASLDVGVISSLISMY 117
+ M+ +G+RP+ +FV VIS+CS L++ QG+QIH+ +K+ S + V ++LI+MY
Sbjct: 330 CFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMY 389
Query: 118 SRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
S+CG L D+ + F + V +SMIA Y HG E+++LF+ M +++ +TF+
Sbjct: 390 SKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFI 449
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
S+L AC+H G E+G +F++M +K+ +P EHY+C++DLLGR G L EA LI MP
Sbjct: 450 SVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPF 509
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEF 297
+I W +LL AC+TH + ++A + A ++L + P +AAPYV+LSN++ASA RW+ V+
Sbjct: 510 NPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATV 569
Query: 298 REAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDT 357
R+ MR+R VKK+PG SW+E+K ++H F D SHP EI +LEE++ +MK GYVPD
Sbjct: 570 RKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPDV 629
Query: 358 GADMHDMDSE---EKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYI 400
+ D EKE L HHSEKLA+AF G V++ K+I
Sbjct: 630 RWALVKDDGTRGGEKEIRLGHHSEKLAVAFGLISTKDGEPVLVVKNLRICGDCHNAIKFI 689
Query: 401 SEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
S I REI VRDA RFH F+ G+CSCGDYW
Sbjct: 690 SAIAGREITVRDAHRFHCFKEGQCSCGDYW 719
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 126/257 (49%), Gaps = 4/257 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMP-IRNVIAWITLIAGKAQNGLAEDVLDQ 59
GF+ + ++L Y K+G L + ++V M IR+ ++W ++I Q+ L
Sbjct: 168 GFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGL 227
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ M G D T SV+++ + L L G Q H +++K G + V S LI +YS+
Sbjct: 228 FQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSK 287
Query: 120 C-GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKG-EEAINLFEQMEQKEFEANDVTFV 177
C G + D K F E D+VLW++M++ Y + + E+A+ F QM+ + ND +FV
Sbjct: 288 CGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFV 347
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
++ ACS+ +G + L +K R+ ++ + +CG L +A L M
Sbjct: 348 CVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRM-A 406
Query: 238 KANAIIWKTLLSACKTH 254
+ N + ++++ H
Sbjct: 407 EHNTVSLNSMIAGYAQH 423
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 117/237 (49%), Gaps = 6/237 (2%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y K + ++ +P +++++ TLI+ A G L ++ MR +G D T
Sbjct: 84 YAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDXFTL 143
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLEC-E 134
+VI++C + +G Q+H+ V +G V V ++L++ Y + G LDD+ + F
Sbjct: 144 SAVITACCD--DVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGG 201
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGME 194
D V W+SMI AYG H +G +A+ LF++M ++ + T S+L A + G++
Sbjct: 202 IRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQ 261
Query: 195 FFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
F ++K + + + + ++DL +CG + + + ++W T++S
Sbjct: 262 FHGQLIKTGFHQNSHVG--SGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSG 316
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 97/231 (41%), Gaps = 38/231 (16%)
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
F ++ +C L G+ +H+ +K+ + I +YS+CG L + K F +
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCG------- 187
+V ++++IAAY + A LF+Q+ + + V++ +L+ A + CG
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDL----VSYNTLISAYADCGETAPALG 126
Query: 188 ----LKEKG--MEFFDL---------------MVKKYRRKPRLEHYTCVVDLL----GRC 222
++E G M+ F L + + Y V + L G+
Sbjct: 127 LFSGMREMGLDMDXFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKN 186
Query: 223 GYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVN 271
G LD+A + M + + W +++ A H+ A + +E++ G+N
Sbjct: 187 GDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLN 237
>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
Length = 1008
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 179/444 (40%), Positives = 268/444 (60%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + + G++L MY K G L + ++ I+W LI G QNG E+ L +
Sbjct: 565 GLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLF 624
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ MR G RPD+ TF S+I + S LA +G G+Q+H+ ++++G V S L+ MY++C
Sbjct: 625 SDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKC 684
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
GCLD++++TF E + + W+++I+AY +G+ + AI +FE M F + VTF+S+L
Sbjct: 685 GCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVL 744
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL ++ M++F LM +Y P EHY CV+D LGR G + ++ MP KA+
Sbjct: 745 AACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKAD 804
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
IIW ++L +C+ H + ++A A+++ G+ P DA PYV+LSNI+A A +W+ + ++
Sbjct: 805 PIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKI 864
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
MR+R V+KE G SW+EIK +++ F D + P EI L+ L EM +GY PD
Sbjct: 865 MRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDITCA 924
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA--------------EHTRGLIVMLPFKYISEIKNR 406
+H +D E K +LK+HSE+LAIAFA T L K IS+I NR
Sbjct: 925 LHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIMKNLTACLDCHAVIKMISKIVNR 984
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
+IIVRD+ RFHHF++G CSCGDYW
Sbjct: 985 DIIVRDSRRFHHFKDGVCSCGDYW 1008
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 135/271 (49%), Gaps = 4/271 (1%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
L++ +SL Y K L + ++ MP R+ +++ +IA A N A VL + M
Sbjct: 467 LNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREM 526
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
+ +GF + + +++S L + G+QIHA++V G + + + ++LI MYS+CG L
Sbjct: 527 QKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGML 586
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
D + F + W+++I Y +G+ EEA+ LF M + + TF S++ A
Sbjct: 587 DAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKAS 646
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
S + G + +++ K + + +VD+ +CG LDEA MP + N+I
Sbjct: 647 SSLAMIGLGRQLHSYLIRS-GYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPER-NSIS 704
Query: 244 WKTLLSACKTHKSTDMAGRIAEEIL--GVNP 272
W ++SA + A ++ E +L G NP
Sbjct: 705 WNAVISAYAHYGEAKNAIKMFEGMLHCGFNP 735
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 117/290 (40%), Gaps = 35/290 (12%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F L+L+ + Y SG L + + P RN W ++ A G D L +
Sbjct: 289 FSLNLILSA-----YSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFR 343
Query: 62 LMRMVGFRPDKITFVSVIS--SCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
M G PD++T +V++ C+ +H +K G V V ++L+ Y +
Sbjct: 344 AMLGEGVIPDRVTVTTVLNLPGCTV-------PSLHPFAIKFGLDTHVFVCNTLLDAYCK 396
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G L + + FLE D V +++M+ G +A+ LF M + + + + +
Sbjct: 397 HGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGYSRHPLHLLQY 456
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
++ + + ++ V ++D +C LD+ L MP +
Sbjct: 457 SHS------RSRSTSVLNVFVN-----------NSLLDFYSKCDCLDDMRRLFDEMPERD 499
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLSNIHAS 287
N + + +++A ++ R+ E+ LG + Q PY + ++ S
Sbjct: 500 N-VSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQ-VLPYATMLSVAGS 547
>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Brachypodium distachyon]
Length = 750
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 183/448 (40%), Positives = 265/448 (59%), Gaps = 24/448 (5%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
+E ++ GS+L MY K S+ E V R M +N+I+W +I G QNG E+ + ++
Sbjct: 308 YEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFS 367
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M+ G +PD T SVISSC+ LA+L +G Q H + +G V V ++L+++Y +CG
Sbjct: 368 EMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCG 427
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
++D+ + F E + D V W++++ Y GK +E I+LFE+M K + + VTF+ +L
Sbjct: 428 SIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLS 487
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
ACS GL +KG +F M + + P +HYTC++DL R G+L +A I+ MP +A
Sbjct: 488 ACSRSGLVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDA 547
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
W TLLSAC+ ++ AE +L ++PQ+ A YVLL ++HAS W V++ R M
Sbjct: 548 FGWATLLSACRLRGDMEIGKWAAENLLKLDPQNPASYVLLCSMHASKGEWNDVAKLRRGM 607
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
R+R VKKEPG SW++ KN+VH F+ D+SHP S I L+ L S+M GY PD + +
Sbjct: 608 RDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSRTIYEKLQWLNSKMVEEGYKPDVSSVL 667
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISE 402
HD+ EK + L HHSEKLAIAF GLI + P K+IS+
Sbjct: 668 HDVADAEKVHMLSHHSEKLAIAF-----GLIFVPPEMPIRIVKNLRVCVDCHNATKFISK 722
Query: 403 IKNREIIVRDASRFHHFRNGKCSCGDYW 430
I R+I+VRDA RFH F NG CSCGD+W
Sbjct: 723 ITGRDILVRDAVRFHKFSNGICSCGDFW 750
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 154/339 (45%), Gaps = 35/339 (10%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNV----------------------- 37
GF GS L MY K G + + +V M +NV
Sbjct: 175 GFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALF 234
Query: 38 --------IAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLG 89
I W T++ G QNGL + LD + MR G D+ TF S++++C LA L
Sbjct: 235 EAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALE 294
Query: 90 QGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYG 149
+G+QIHA + + +V V S+L+ MYS+C + + F + +++ W++MI YG
Sbjct: 295 EGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYG 354
Query: 150 FHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRL 209
+G GEEA+ +F +M++ + +D T S++ +C++ E+G +F L + R P +
Sbjct: 355 QNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLR-PYV 413
Query: 210 EHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL- 268
+V L G+CG +++A L M + + W L+ + E++L
Sbjct: 414 TVSNALVTLYGKCGSIEDAHRLFDEMSFH-DQVSWTALVMGYAQFGKAKETIDLFEKMLS 472
Query: 269 -GVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNV 306
GV P +LS S +G S F ++ ++
Sbjct: 473 KGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDI 511
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 132/305 (43%), Gaps = 37/305 (12%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY-NLM 63
+LV G+SL ++G + + E++ +P R+ +++ L+AG ++ G Y L+
Sbjct: 76 NLVTGNSLLSALARAGLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALL 135
Query: 64 R-MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
R G RP +IT V+ S L G+Q+H ++++ G S L+ MY++ G
Sbjct: 136 RDEAGVRPSRITMSGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGP 195
Query: 123 LDDSVKTFLECEYSDVVL-------------------------------WSSMIAAYGFH 151
+ D+ + F E E +VV+ W++M+ +
Sbjct: 196 IGDARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQN 255
Query: 152 GKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEH 211
G EA+++F +M + + TF S+L AC E+G + + +
Sbjct: 256 GLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVG 315
Query: 212 YTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--G 269
+ +VD+ +C + A A+ R M K N I W ++ + + A R+ E+ G
Sbjct: 316 -SALVDMYSKCRSVRLAEAVFRRMMWK-NIISWTAMIVGYGQNGCGEEAVRVFSEMQRDG 373
Query: 270 VNPQD 274
+ P D
Sbjct: 374 IKPDD 378
>gi|116792842|gb|ABK26521.1| unknown [Picea sitchensis]
Length = 370
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 167/372 (44%), Positives = 243/372 (65%), Gaps = 24/372 (6%)
Query: 78 VISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSD 137
++ +C+ +A L QG+Q+HA+++K G LDV V + L+ MY +CG ++D+ + F + D
Sbjct: 4 ILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLLEPD 63
Query: 138 VVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFD 197
V W++MI+ HG G+EA+ LFEQM Q + N +TFV +L CSH GL ++G +FD
Sbjct: 64 VASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRNYFD 123
Query: 198 LMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKST 257
M + + P+ EHY+C+VDL GR G LDEA I MPV+ NA +W +LL AC+ H +
Sbjct: 124 SMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACRVHGNI 183
Query: 258 DMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEI 317
++A R E+++ + P++ YVLLSNI+A+A RW + R+ M++R+VKKEPG SW+E+
Sbjct: 184 ELAERAVEQLIELTPENPGTYVLLSNIYAAAGRWDDAGKVRKMMKDRSVKKEPGCSWIEV 243
Query: 318 KNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHS 377
+N+VH F +GD SHP+ EI LE LT +MK GY+P+T +HD++ E+KE+ L HHS
Sbjct: 244 QNKVHPFIVGDSSHPQIEEIYETLETLTLQMKAAGYIPNTNFVLHDVEEEQKEWILGHHS 303
Query: 378 EKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREIIVRDASRFHH 418
EKLAIAF G+I P K+IS I +REI++RD RFHH
Sbjct: 304 EKLAIAF-----GIISTPPGTTIRVVKNLRVCGDCHTATKFISRIVSREIVLRDTHRFHH 358
Query: 419 FRNGKCSCGDYW 430
F++G+CSCGDYW
Sbjct: 359 FKDGQCSCGDYW 370
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 96/188 (51%), Gaps = 5/188 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFELD+ + L MY K G + + ++V + +V +W +I+G AQ+G ++ + +
Sbjct: 28 GFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLLEPDVASWNAMISGLAQHGCGKEAVLLF 87
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSR 119
M G +P++ITFV V+S CS + +G+ + + G S S ++ ++ R
Sbjct: 88 EQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRNYFDSMTRDHGISPKAEHYSCMVDLFGR 147
Query: 120 CGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
GCLD+++ + + +W S++ A HG E A EQ+ + E N T+V
Sbjct: 148 AGCLDEALNFINQMPVEPNASVWGSLLGACRVHGNIELAERAVEQLIELTPE-NPGTYVL 206
Query: 179 L--LYACS 184
L +YA +
Sbjct: 207 LSNIYAAA 214
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 173/445 (38%), Positives = 283/445 (63%), Gaps = 16/445 (3%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
+E G++L Y+K G + E KV + ++++AW ++AG AQ G E + +
Sbjct: 424 YERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFG 483
Query: 62 LMRMVGFRPDKITFVSVISSCSEL-ATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ G +P++ TF S+++ C+ A++GQG+Q H +K+ + V S+L++MY++
Sbjct: 484 ELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKK 543
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ + + F D+V W+SMI+ Y HG+ +A+++F++M++++ + + VTF+ +
Sbjct: 544 GNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVF 603
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+H GL E+G ++FD+MV+ + P EH +C+VDL R G L++A +I NMP A
Sbjct: 604 AACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAG 663
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+ IW+T+L+AC+ HK T++ AE+I+ + P+D+A YVLLSN++A + WQ ++ R+
Sbjct: 664 STIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKL 723
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M ERNVKKEPG SW+E+KN+ + F GD+SHP +I + LE+L++ +K GY PDT
Sbjct: 724 MNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYV 783
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA-----EHTRGLIVM---------LPFKYISEIKNR 406
+ D+D E KE L HSE+LAIAF + + LI+ L K I++I+ R
Sbjct: 784 LQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEER 843
Query: 407 EIIVRDASRFHHF-RNGKCSCGDYW 430
EI+VRD++RFHHF +G CSCGD+W
Sbjct: 844 EIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 144/297 (48%), Gaps = 13/297 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D+ G+SL YMK + +G KV M RNV+ W TLI+G A+N + ++VL +
Sbjct: 123 GFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLF 182
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G +P+ TF + + +E G+G Q+H VVK G + V +SLI++Y +C
Sbjct: 183 MRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKC 242
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + F + E VV W+SMI+ Y +G EA+ +F M ++ +F S++
Sbjct: 243 GNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVI 302
Query: 181 YACSHCGLKE-KGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
C++ LKE + E V KY T ++ +C + +A L + +
Sbjct: 303 KLCAN--LKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVG 360
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQD--------AAPYVLLSNIHA 286
N + W ++S + + A + E+ GV P + A P + S +HA
Sbjct: 361 NVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHA 417
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 131/260 (50%), Gaps = 16/260 (6%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIR-LMPIRNVIAWITLIAGKAQNGLAEDVLDQ 59
GF D ++L Y K ++++ ++ + + + NV++W +I+G QN E+ +D
Sbjct: 325 GFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDL 384
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
++ M+ G RP++ T+ ++++ ++ ++HA+VVK V ++L+ Y +
Sbjct: 385 FSEMKRKGVRPNEFTYSVILTALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVK 440
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G ++++ K F + D+V WS+M+A Y G+ E AI +F ++ + + N+ TF S+
Sbjct: 441 LGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSI 500
Query: 180 LYACSHCGLK-EKGMEFFDLMVKKYRRKPRLEHYTCV----VDLLGRCGYLDEAAALIRN 234
L C+ +G +F + K RL+ CV + + + G ++ A + +
Sbjct: 501 LNVCAATNASMGQGKQFHGFAI-----KSRLDSSLCVSSALLTMYAKKGNIESAEEVFKR 555
Query: 235 MPVKANAIIWKTLLSACKTH 254
K + + W +++S H
Sbjct: 556 QREK-DLVSWNSMISGYAQH 574
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 109/218 (50%), Gaps = 2/218 (0%)
Query: 33 PIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQ 92
P R+ ++I+L+ G +++G ++ + + +G D F SV+ + L G+
Sbjct: 54 PGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGR 113
Query: 93 QIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHG 152
Q+H + +K G DV V +SL+ Y + D K F E + +VV W+++I+ Y +
Sbjct: 114 QLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNS 173
Query: 153 KGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY 212
+E + LF +M+ + + N TF + L + G+ +G++ ++VK K +
Sbjct: 174 MNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKT-IPVS 232
Query: 213 TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+++L +CG + +A L VK+ + W +++S
Sbjct: 233 NSLINLYLKCGNVRKARILFDKTEVKS-VVTWNSMISG 269
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 174/429 (40%), Positives = 265/429 (61%), Gaps = 14/429 (3%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y ++G L + + +MP R+ ++W +IAG AQNGL E+ ++ M+ G ++ TF
Sbjct: 322 YCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTF 381
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
+S+C+++A L G+Q+H +VV+ G V ++L+ MY +CGC+D++ F ++
Sbjct: 382 CCALSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQH 441
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
D+V W++M+A Y HG G +A+ +FE M + +++T V +L ACSH GL ++G E+
Sbjct: 442 KDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTGLTDRGTEY 501
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK 255
F M K Y P +HY C++DLLGR G L+EA LIRNMP + +A W LL A + H
Sbjct: 502 FHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALLGASRIHG 561
Query: 256 STDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWL 315
+ ++ + AE + + P ++ YVLLSN++A++ RW VS+ R MR+ V+K PG SW+
Sbjct: 562 NMELGEQAAEMVFKMEPHNSGMYVLLSNLYAASGRWVDVSKMRLKMRQIGVQKTPGYSWV 621
Query: 316 EIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKH 375
E++N++H FT+GD HP I +LEEL +MK GYV T +HD++ EEK++ LK+
Sbjct: 622 EVQNKIHTFTVGDCFHPEKGRIYAFLEELDLKMKHEGYVSSTKLVLHDVEEEEKKHMLKY 681
Query: 376 HSEKLAIAFAEHT----RGLIVML----------PFKYISEIKNREIIVRDASRFHHFRN 421
HSEKLA+AF T + + VM K+IS+I R IIVRD+ R+HHF
Sbjct: 682 HSEKLAVAFGILTMPSGKPIRVMKNLRVCEDCHNAIKHISKIVGRLIIVRDSHRYHHFSE 741
Query: 422 GKCSCGDYW 430
G CSC DYW
Sbjct: 742 GICSCRDYW 750
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 92/189 (48%), Gaps = 7/189 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+E + G++L MY K G + E V + + +++++W T++AG A++G L +
Sbjct: 408 GYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVF 467
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQ-IHAEVVKAGASLDVGVISSLISMYSR 119
M G +PD+IT V V+S+CS +G + H+ G + + + +I + R
Sbjct: 468 ESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGR 527
Query: 120 CGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGK---GEEAINLFEQMEQKEFEANDVT 175
GCL+++ + D W +++ A HG GE+A + +ME +
Sbjct: 528 AGCLEEAQNLIRNMPFEPDAATWGALLGASRIHGNMELGEQAAEMVFKMEPH--NSGMYV 585
Query: 176 FVSLLYACS 184
+S LYA S
Sbjct: 586 LLSNLYAAS 594
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 131/282 (46%), Gaps = 16/282 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
DL++ +++ Y + G L + ++ P+R+V W ++ Q+G+ ++ ++ M
Sbjct: 218 DLISWNTMISGYAQDGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGMLDEARRVFDEM- 276
Query: 65 MVGFRPDK--ITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
P K +++ +I+ ++ + G+++ E+ ++G + +IS Y + G
Sbjct: 277 -----PQKREMSYNVMIAGYAQYKRMDMGRELFEEM----PFPNIGSWNIMISGYCQNGD 327
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
L + F D V W+++IA Y +G EEA+N+ +M++ N TF L A
Sbjct: 328 LAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSA 387
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
C+ E G + +V+ K L +V + +CG +DEA + + + K + +
Sbjct: 388 CADIAALELGKQVHGQVVRTGYEKGCLVG-NALVGMYCKCGCIDEAYDVFQGVQHK-DIV 445
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLS 282
W T+L+ H A + E ++ GV P + +LS
Sbjct: 446 SWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLS 487
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 117/250 (46%), Gaps = 22/250 (8%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E D+V+ +++ Y++SG + E V MP +N I+W L+A ++G E+
Sbjct: 123 EKDVVSWNAMLSGYVRSGHVDEARDVFDRMPHKNSISWNGLLAAYVRSGRLEEA------ 176
Query: 63 MRMVGFRPD--KITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
R+ + D I+ ++ + LG +Q+ ++ D+ +++IS Y++
Sbjct: 177 RRLFESKSDWELISCNCLMGGYVKRNMLGDARQLFDQI----PVRDLISWNTMISGYAQD 232
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L + + F E DV W++M+ AY G +EA +F++M QK ++++ ++
Sbjct: 233 GDLSQARRLFEESPVRDVFTWTAMVYAYVQDGMLDEARRVFDEMPQKR----EMSYNVMI 288
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
+ + G E F+ M P + + ++ + G L +A L MP + +
Sbjct: 289 AGYAQYKRMDMGRELFEEMP-----FPNIGSWNIMISGYCQNGDLAQARNLFDMMPQR-D 342
Query: 241 AIIWKTLLSA 250
++ W +++
Sbjct: 343 SVSWAAIIAG 352
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 121/295 (41%), Gaps = 29/295 (9%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNG---LAEDVLDQYNLMRMVGFRPDK 72
+M++G V MP+RN +++ +I+G +N LA D+ D+ D
Sbjct: 43 HMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMP-------HKDL 95
Query: 73 ITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLE 132
++ +++ + L + + + + DV ++++S Y R G +D++ F
Sbjct: 96 FSWNLMLTGYARNRRLRDARMLFDSMPEK----DVVSWNAMLSGYVRSGHVDEARDVFDR 151
Query: 133 CEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKG 192
+ + + W+ ++AAY G+ EEA LFE E ++ L+ +
Sbjct: 152 MPHKNSISWNGLLAAYVRSGRLEEARRLFESKSDWEL----ISCNCLMGGYVKRNMLGDA 207
Query: 193 MEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACK 252
+ FD + + L + ++ + G L +A L PV+ + W ++ A
Sbjct: 208 RQLFDQIPVR-----DLISWNTMISGYAQDGDLSQARRLFEESPVR-DVFTWTAMVYAYV 261
Query: 253 THKSTDMAGRIAEEILGVNPQD-AAPYVLLSNIHASAKRWQGVSEFREAMRERNV 306
D A R+ +E+ PQ Y ++ +A KR E E M N+
Sbjct: 262 QDGMLDEARRVFDEM----PQKREMSYNVMIAGYAQYKRMDMGRELFEEMPFPNI 312
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 50/271 (18%), Positives = 109/271 (40%), Gaps = 41/271 (15%)
Query: 7 VAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV 66
V+ +++ Y+++ + MP +++ +W ++ G A+N D ++ M
Sbjct: 65 VSYNAMISGYLRNAKFSLARDLFDKMPHKDLFSWNLMLTGYARNRRLRDARMLFDSMP-- 122
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIH---------------AEVVKAG--------- 102
D +++ +++S + + + + A V++G
Sbjct: 123 --EKDVVSWNAMLSGYVRSGHVDEARDVFDRMPHKNSISWNGLLAAYVRSGRLEEARRLF 180
Query: 103 -ASLDVGVIS--SLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAIN 159
+ D +IS L+ Y + L D+ + F + D++ W++MI+ Y G +A
Sbjct: 181 ESKSDWELISCNCLMGGYVKRNMLGDARQLFDQIPVRDLISWNTMISGYAQDGDLSQARR 240
Query: 160 LFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLL 219
LFE+ ++ T+ +++YA G+ ++ FD M +K R Y ++
Sbjct: 241 LFEESPVRDV----FTWTAMVYAYVQDGMLDEARRVFDEMPQK-----REMSYNVMIAGY 291
Query: 220 GRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+ +D L MP N W ++S
Sbjct: 292 AQYKRMDMGRELFEEMPF-PNIGSWNIMISG 321
>gi|224071204|ref|XP_002303374.1| predicted protein [Populus trichocarpa]
gi|222840806|gb|EEE78353.1| predicted protein [Populus trichocarpa]
Length = 569
Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 188/444 (42%), Positives = 272/444 (61%), Gaps = 24/444 (5%)
Query: 6 LVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRM 65
+VA +++ YMK G + E++ MP +N++ W +IAG +N AED + + M
Sbjct: 131 VVAWTAMITGYMKLGRIGLAERLFEKMPEKNLVTWNAMIAGYIENHRAEDGVKLFRTMVG 190
Query: 66 VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD 125
G +P+ T S + CSEL+ L G+Q+H V K+ D +SLISMY +CG L+D
Sbjct: 191 FGIQPNSSTLSSALLGCSELSALQLGRQVHQLVCKSPLCDDTTAGTSLISMYCKCGVLED 250
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
K F++ DVV W++MI+ Y HG+G++A+ LF++M +K + + +TFV++L AC+H
Sbjct: 251 GWKLFVQVPRRDVVTWNAMISGYAQHGEGKKALGLFDEMIEKGMKPDWITFVAVLMACNH 310
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
G + G+++F M K Y + +HYTC+VDLLGR G L EA LI MP K +A ++
Sbjct: 311 AGFTDLGVKYFHSMAKDYGLVAKPDHYTCMVDLLGRAGKLVEAVDLIEKMPFKPHAAVFG 370
Query: 246 TLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERN 305
TLL AC+ HK+T+MA ++++L ++P A YV L+N++A+ KRW V+ R++M+
Sbjct: 371 TLLGACRIHKNTEMAEFASQKLLNLDPASATGYVQLANVYAATKRWDHVARVRKSMKSCK 430
Query: 306 VKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMD 365
V K PG SW+E+K+ HQF GDK HP I L+EL +MKL GYVPD +HD+
Sbjct: 431 VVKTPGYSWIEVKSMAHQFRSGDKFHPELASIHGKLKELEKKMKLAGYVPDLEFALHDVG 490
Query: 366 SEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNR 406
E+KE L HSEKLAIA+ GLI + P KYIS+I+ R
Sbjct: 491 EEQKEQLLLWHSEKLAIAY-----GLIKLPPGTPIRVFKNLRVCGDCHRAIKYISQIERR 545
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EIIVRD +RFHHF++G CSC DYW
Sbjct: 546 EIIVRDTTRFHHFKDGHCSCADYW 569
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 123/277 (44%), Gaps = 22/277 (7%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E D V+ +++ Y+++ ++ + MPI++ +W T+I G AQN + D + +
Sbjct: 35 EPDAVSYNTMLSCYVRNSNMERAQAFFEDMPIKDTPSWNTMITGFAQNQQMDKARDLFLI 94
Query: 63 MRMVGFRPDK--ITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M P K +T+ ++IS E L ++ + V +++I+ Y +
Sbjct: 95 M------PTKNVVTWNAMISGYVECGDLDSALKL----FEKAPFKSVVAWTAMITGYMKL 144
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + + F + ++V W++MIA Y + + E+ + LF M + N T S L
Sbjct: 145 GRIGLAERLFEKMPEKNLVTWNAMIAGYIENHRAEDGVKLFRTMVGFGIQPNSSTLSSAL 204
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLG---RCGYLDEAAALIRNMPV 237
CS + G + L+ K P + T L+ +CG L++ L +P
Sbjct: 205 LGCSELSALQLGRQVHQLVCK----SPLCDDTTAGTSLISMYCKCGVLEDGWKLFVQVP- 259
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNP 272
+ + + W ++S H A + +E++ G+ P
Sbjct: 260 RRDVVTWNAMISGYAQHGEGKKALGLFDEMIEKGMKP 296
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 82/179 (45%), Gaps = 33/179 (18%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D AG+SL MY K G L +G K+ +P R+V+ W +I+G AQ+G + L ++ M
Sbjct: 231 DTTAGTSLISMYCKCGVLEDGWKLFVQVPRRDVVTWNAMISGYAQHGEGKKALGLFDEMI 290
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G +PD ITFV+V+ +C+ G + + K D G+++
Sbjct: 291 EKGMKPDWITFVAVLMACNHAGFTDLGVKYFHSMAK-----DYGLVAKPDH--------- 336
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
++ M+ G GK EA++L E+M F+ + F +LL AC
Sbjct: 337 ----------------YTCMVDLLGRAGKLVEAVDLIEKM---PFKPHAAVFGTLLGAC 376
>gi|227463000|gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463002|gb|ACP39953.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 592
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 180/445 (40%), Positives = 277/445 (62%), Gaps = 15/445 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ LD ++L Y KSG ++ KV MP + V+AW ++I+G QNG ++ ++ +
Sbjct: 148 GYGLDAYVQAALVSFYAKSGHVMIARKVFDKMPEKTVVAWNSMISGYEQNGFGKEAVELF 207
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
LM+ +G +PD TFVS++S+C+++ +G G +H + + L+V + ++L++MYSRC
Sbjct: 208 FLMQDLGVKPDSSTFVSLLSACAQVGAIGLGFWVHEYIARNCFDLNVVLGTALMNMYSRC 267
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + + F E ++V W++MI+ YG HG G +AI LF +M N+VTFV++L
Sbjct: 268 GNVSKAREVFDSMEEKNIVAWTAMISGYGMHGHGSQAIELFNEMSFDGPRPNNVTFVAVL 327
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM-PVKA 239
AC+H GL ++G + F M ++Y P +EH C+VD+LGR G+L+EA I+N P +
Sbjct: 328 SACAHAGLVDEGRQIFTTMKQEYGLVPSVEHQVCMVDMLGRAGHLNEAYQFIKNTSPKEP 387
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
+W +L ACK HK+ D+ +AE +L + P++ YV+LSNI+A A R V + R
Sbjct: 388 APAVWTAMLGACKMHKNFDLGVEVAEHLLSIEPENPGHYVMLSNIYALAGRMDRVEKIRN 447
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M +KKE G S +++ ++V+ F+MGDKSHP++ +I LYL+EL S + GY+P + +
Sbjct: 448 IMIRNRLKKEVGYSTIDVDHKVYLFSMGDKSHPKTNQIYLYLDELMSRCREAGYIPASES 507
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVML--------------PFKYISEIKN 405
MH+++ EE+EY L++HSEKLAIAF G V + KYIS I N
Sbjct: 508 VMHEVEEEEREYALRYHSEKLAIAFGLLKTGSGVAIRIVKNLRMCEDCHTAIKYISIIAN 567
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
REI VRD RFHHF++G CSC DYW
Sbjct: 568 REINVRDRLRFHHFKDGSCSCQDYW 592
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 127/277 (45%), Gaps = 12/277 (4%)
Query: 12 LAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPD 71
L+ Y + + ++ +P + + +LI ++ ++ L Y M +
Sbjct: 58 LSFAYAAASPISYTRRLFFSIPKPDTFLFHSLITLTSKFSFPQESLLCYRRMLLANISSS 117
Query: 72 KITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFL 131
TF +VI S ++L G+ IH V G LD V ++L+S Y++ G + + K F
Sbjct: 118 NYTFSAVIKSSADLTAFSIGETIHCHVYICGYGLDAYVQAALVSFYAKSGHVMIARKVFD 177
Query: 132 ECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEK 191
+ VV W+SMI+ Y +G G+EA+ LF M+ + + TFVSLL AC+ G
Sbjct: 178 KMPEKTVVAWNSMISGYEQNGFGKEAVELFFLMQDLGVKPDSSTFVSLLSACAQVG--AI 235
Query: 192 GMEFFDLMVKKYRRKPRLEHY----TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTL 247
G+ F+ V +Y + + T ++++ RCG + +A + +M K N + W +
Sbjct: 236 GLGFW---VHEYIARNCFDLNVVLGTALMNMYSRCGNVSKAREVFDSMEEK-NIVAWTAM 291
Query: 248 LSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLS 282
+S H A + E+ G P + +LS
Sbjct: 292 ISGYGMHGHGSQAIELFNEMSFDGPRPNNVTFVAVLS 328
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 355 bits (910), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 174/434 (40%), Positives = 267/434 (61%), Gaps = 24/434 (5%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y ++G L E + V MP ++ ++W ++A +Q G +E+ L + M G ++ F
Sbjct: 327 YAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAF 386
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
V+S+C+++A L G Q+H +++AG + V ++L++MY +CG ++D+ F E E
Sbjct: 387 ACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEE 446
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
DVV W++MIA Y HG G+EA+ +F+ M + +D+T V +L ACSH GL EKG+ +
Sbjct: 447 RDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISY 506
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK 255
F M + + EHYTC++DLLGR G L EA L+++MP + ++ +W LL A + H+
Sbjct: 507 FYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHR 566
Query: 256 STDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWL 315
+ ++ AE+I + P++A YVLLSNI+AS+ +W+ + R M ER VKK PG SW+
Sbjct: 567 NPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWI 626
Query: 316 EIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKH 375
E++N+VH F+ GD HP +I +LE+L MK GYV T +HD++ EEKE+ LK+
Sbjct: 627 EVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKY 686
Query: 376 HSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREIIVRDASRF 416
HSEKLA+A+ G++ + P FKYIS I+ R I++RD++RF
Sbjct: 687 HSEKLAVAY-----GILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRLILLRDSNRF 741
Query: 417 HHFRNGKCSCGDYW 430
HHFR G CSCGDYW
Sbjct: 742 HHFRGGSCSCGDYW 755
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/315 (20%), Positives = 137/315 (43%), Gaps = 26/315 (8%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+V+ + + Y + G +VE ++ P+R+V W +++G AQNG+ E+ ++ M
Sbjct: 223 DVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAM- 281
Query: 65 MVGFRPDK--ITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
P++ +++ +++++ + + + + E+ +V +++++ Y++ G
Sbjct: 282 -----PERNAVSWNAMVAAYIQRRMMDEAK----ELFNMMPCRNVASWNTMLTGYAQAGM 332
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
L+++ F D V W++M+AAY G EE + LF +M + N F +L
Sbjct: 333 LEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLST 392
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVD-----LLGRCGYLDEAAALIRNMPV 237
C+ E GM+ +++ C V + +CG +++A M
Sbjct: 393 CADIAALECGMQLHGRLIRAG------YGVGCFVGNALLAMYFKCGNMEDARNAFEEMEE 446
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRIAE--EILGVNPQDAAPYVLLSNIHASAKRWQGVS 295
+ + + W T+++ H A I + P D +L+ S +G+S
Sbjct: 447 R-DVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGIS 505
Query: 296 EFREAMRERNVKKEP 310
F + V +P
Sbjct: 506 YFYSMHHDFGVTAKP 520
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 95/198 (47%), Gaps = 25/198 (12%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ + G++L MY K G++ + M R+V++W T+IAG A++G ++ L+ +
Sbjct: 413 GYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIF 472
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASL------DVGVISS-- 112
++MR +PD IT V V+++CS H+ +V+ G S D GV +
Sbjct: 473 DMMRTTSTKPDDITLVGVLAACS-----------HSGLVEKGISYFYSMHHDFGVTAKPE 521
Query: 113 ----LISMYSRCGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQK 167
+I + R G L ++ + + D +W +++ A H E + E++ +
Sbjct: 522 HYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFEL 581
Query: 168 EFE-ANDVTFVSLLYACS 184
E E A +S +YA S
Sbjct: 582 EPENAGMYVLLSNIYASS 599
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 128/286 (44%), Gaps = 41/286 (14%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
E +++ + +M++G + + E++ MP R+ + ++AG + NG + +
Sbjct: 34 LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANG---RLPLAAS 90
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEV-VKAGASLDVGVISSLISMYSRC 120
L R + RPD ++ +++ + + ++L + + E+ V+ + +V +IS ++
Sbjct: 91 LFRAIP-RPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNV-----MISSHANH 144
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + F D V W+ M+AAY +G+ EEA LF + E++A +++ +L+
Sbjct: 145 GLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNS--RTEWDA--ISWNALM 200
Query: 181 YACSHCGLKEKGMEFFD-----------LMVKKYRRKPRLEH---------------YTC 214
G + E FD +MV Y R+ + +T
Sbjct: 201 SGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTA 260
Query: 215 VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMA 260
VV + G L+EA + MP + NA+ W +++A + D A
Sbjct: 261 VVSGYAQNGMLEEARRVFDAMPER-NAVSWNAMVAAYIQRRMMDEA 305
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 102/243 (41%), Gaps = 22/243 (9%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L H S SL + + MP+R+ + + +I+ A +GL ++L
Sbjct: 104 NTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDLA------ 157
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAE--VVKAGASLDVGVISSLISMYSRCGCLDDSV 127
P+K +S LA + ++ + + D ++L+S Y + G + ++
Sbjct: 158 PEK----DAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDAISWNALMSGYVQWGKMSEAR 213
Query: 128 KTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCG 187
+ F DVV W+ M++ Y G EA LF+ ++ T+ +++ + G
Sbjct: 214 ELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDV----FTWTAVVSGYAQNG 269
Query: 188 LKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTL 247
+ E+ FD M ++ + +V + +DEA L MP + N W T+
Sbjct: 270 MLEEARRVFDAMPER-----NAVSWNAMVAAYIQRRMMDEAKELFNMMPCR-NVASWNTM 323
Query: 248 LSA 250
L+
Sbjct: 324 LTG 326
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 355 bits (910), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 177/449 (39%), Positives = 270/449 (60%), Gaps = 24/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ D+ ++L ++Y + G E + + ++ I W +++G AQ+GL E+ L+ +
Sbjct: 476 GYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVF 535
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G + + TFVS IS+ + LA + QG+QIHA V+K G + + V ++LIS+Y +C
Sbjct: 536 IKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSETEVANALISLYGKC 595
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++D+ F E + V W+++I + HG G EA++LF+QM+Q+ + NDVTF+ +L
Sbjct: 596 GSIEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVL 655
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL E+G+ +F M ++ PR +HY CVVD+LGR G LD A + MPV AN
Sbjct: 656 AACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLDRARKFVEEMPVSAN 715
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A++W+TLLSAC+ HK+ ++ A+ +L + P D+A YVLLSN +A +W R+
Sbjct: 716 AMVWRTLLSACRVHKNIEIGELAAKYLLELEPHDSASYVLLSNAYAVTGKWACRDHVRKM 775
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M++R V+KEPG SW+E+KN VH F +GD+ HP + +I YL +L + GY+
Sbjct: 776 MKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAHQIYKYLADLDDRLAKIGYIQGNYFL 835
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
H+ + E+K+ HSEKLA+AF GL+ + P K+ S
Sbjct: 836 FHEKEKEQKDPTAFVHSEKLAVAF-----GLMSLPPSMPLRVIKNLRVCNDCHTWMKFTS 890
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
E+ REI++RD RFHHF NG CSCGD+W
Sbjct: 891 EVMGREIVLRDVYRFHHFNNGNCSCGDFW 919
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 162/314 (51%), Gaps = 8/314 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE D+ L MY K G L + +++ ++ ++V++W ++IAG Q+ ++ L+ +
Sbjct: 375 GFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETF 434
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M++ G PD I S IS+C+ + + QGQQIH+ V +G S DV + ++L+++Y+RC
Sbjct: 435 KDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARC 494
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ F E+ D + W+ M++ + G EEA+ +F +M Q + N TFVS +
Sbjct: 495 GRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSI 554
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
A ++ ++G + ++K E ++ L G+CG +++A M + N
Sbjct: 555 SASANLADIKQGKQIHATVIKT-GCTSETEVANALISLYGKCGSIEDAKMQFFEMSER-N 612
Query: 241 AIIWKTLLSACKTH----KSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSE 296
+ W T++++C H ++ D+ ++ +E G+ P D +L+ +G+
Sbjct: 613 HVSWNTIITSCSQHGWGLEALDLFDQMKQE--GLKPNDVTFIGVLAACSHVGLVEEGLGY 670
Query: 297 FREAMRERNVKKEP 310
F+ E + P
Sbjct: 671 FKSMSSEHGIHPRP 684
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 133/250 (53%), Gaps = 2/250 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D +AG+ L +Y K G + +V + R+ ++W+ +++G A+NGL E+ + Y
Sbjct: 72 GLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLY 131
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M G P SV+S+C++ A QG+ +HA+V K G+ + V ++LI++Y R
Sbjct: 132 HQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRF 191
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L + + F E Y D V ++++I+ + G GE A+ +FE+M + + VT SLL
Sbjct: 192 GSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLL 251
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+ G KG + ++K P ++DL +CG + EA + ++ + N
Sbjct: 252 AACASIGDLNKGKQLHSYLLKA-GMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGD-RTN 309
Query: 241 AIIWKTLLSA 250
++W +L A
Sbjct: 310 VVLWNLMLVA 319
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 140/251 (55%), Gaps = 2/251 (0%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
+ V G++L +Y++ GSL E+V MP + + + TLI+ AQ G E L+ + MR
Sbjct: 177 ETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMR 236
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+ G+ PD +T S++++C+ + L +G+Q+H+ ++KAG S D + SL+ +Y +CG +
Sbjct: 237 LSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIV 296
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
++++ F + ++VVLW+ M+ AYG ++ +LF QM N+ T+ LL C+
Sbjct: 297 EALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCT 356
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
+ G G E L+ K + + ++D+ + G+LD+A ++ + K + + W
Sbjct: 357 YAGEINLG-EQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAK-DVVSW 414
Query: 245 KTLLSACKTHK 255
++++ H+
Sbjct: 415 TSMIAGYVQHE 425
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 116/251 (46%), Gaps = 4/251 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D + SL +Y+K G +VE ++ + NV+ W ++ Q D +
Sbjct: 274 GMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLF 333
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G RP++ T+ ++ +C+ + G+QIH +K G D+ V LI MYS+
Sbjct: 334 CQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKY 393
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G LD + + E DVV W+SMIA Y H +EA+ F+ M+ +++ S +
Sbjct: 394 GWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAI 453
Query: 181 YACSHCGLKEKGMEFFD-LMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
AC+ +G + + V Y + + +V+L RCG EA +L + K
Sbjct: 454 SACAGIKAMRQGQQIHSRVYVSGYSADVSI--WNALVNLYARCGRSKEAFSLFEAIEHK- 510
Query: 240 NAIIWKTLLSA 250
+ I W ++S
Sbjct: 511 DKITWNGMVSG 521
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 75/174 (43%), Gaps = 2/174 (1%)
Query: 94 IHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGK 153
IHA+ + G D + LI +Y++ G + + + F + D V W +M++ Y +G
Sbjct: 64 IHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGL 123
Query: 154 GEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYT 213
GEEA+ L+ QM S+L AC+ L E+G V K
Sbjct: 124 GEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQG-RLVHAQVYKQGSCSETVVGN 182
Query: 214 CVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEI 267
++ L R G L A + MP + + + TL+S + + A I EE+
Sbjct: 183 ALIALYLRFGSLSLAERVFSEMPY-CDRVTFNTLISRHAQCGNGESALEIFEEM 235
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 355 bits (910), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 174/434 (40%), Positives = 267/434 (61%), Gaps = 24/434 (5%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y ++G L E + V MP ++ ++W ++A +Q G +E+ L + M G ++ F
Sbjct: 327 YAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAF 386
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
V+S+C+++A L G Q+H +++AG + V ++L++MY +CG ++D+ F E E
Sbjct: 387 ACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEE 446
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
DVV W++MIA Y HG G+EA+ +F+ M + +D+T V +L ACSH GL EKG+ +
Sbjct: 447 RDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISY 506
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK 255
F M + + EHYTC++DLLGR G L EA L+++MP + ++ +W LL A + H+
Sbjct: 507 FYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHR 566
Query: 256 STDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWL 315
+ ++ AE+I + P++A YVLLSNI+AS+ +W+ + R M ER VKK PG SW+
Sbjct: 567 NPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWI 626
Query: 316 EIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKH 375
E++N+VH F+ GD HP +I +LE+L MK GYV T +HD++ EEKE+ LK+
Sbjct: 627 EVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKY 686
Query: 376 HSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREIIVRDASRF 416
HSEKLA+A+ G++ + P FKYIS I+ R I++RD++RF
Sbjct: 687 HSEKLAVAY-----GILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRLILLRDSNRF 741
Query: 417 HHFRNGKCSCGDYW 430
HHFR G CSCGDYW
Sbjct: 742 HHFRGGSCSCGDYW 755
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/315 (20%), Positives = 137/315 (43%), Gaps = 26/315 (8%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+V+ + + Y + G +VE ++ P+R+V W +++G AQNG+ E+ ++ M
Sbjct: 223 DVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAM- 281
Query: 65 MVGFRPDK--ITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
P++ +++ +++++ + + + + E+ +V +++++ Y++ G
Sbjct: 282 -----PERNAVSWNAMVAAYIQRRMMDEAK----ELFNMMPCRNVASWNTMLTGYAQAGM 332
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
L+++ F D V W++M+AAY G EE + LF +M + N F +L
Sbjct: 333 LEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLST 392
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVD-----LLGRCGYLDEAAALIRNMPV 237
C+ E GM+ +++ C V + +CG +++A M
Sbjct: 393 CADIAALECGMQLHGRLIRAG------YGVGCFVGNALLAMYFKCGNMEDARNAFEEMEE 446
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRIAE--EILGVNPQDAAPYVLLSNIHASAKRWQGVS 295
+ + + W T+++ H A I + P D +L+ S +G+S
Sbjct: 447 R-DVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGIS 505
Query: 296 EFREAMRERNVKKEP 310
F + V +P
Sbjct: 506 YFYSMHHDFGVTAKP 520
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 95/198 (47%), Gaps = 25/198 (12%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ + G++L MY K G++ + M R+V++W T+IAG A++G ++ L+ +
Sbjct: 413 GYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIF 472
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASL------DVGVISS-- 112
++MR +PD IT V V+++CS H+ +V+ G S D GV +
Sbjct: 473 DMMRTTSTKPDDITLVGVLAACS-----------HSGLVEKGISYFYSMHHDFGVTAKPE 521
Query: 113 ----LISMYSRCGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQK 167
+I + R G L ++ + + D +W +++ A H E + E++ +
Sbjct: 522 HYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFEL 581
Query: 168 EFE-ANDVTFVSLLYACS 184
E E A +S +YA S
Sbjct: 582 EPENAGMYVLLSNIYASS 599
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/286 (19%), Positives = 127/286 (44%), Gaps = 41/286 (14%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
E +++ + +M++G + + E++ MP R+ + ++AG + NG + +
Sbjct: 34 LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANG---RLPLAAS 90
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEV-VKAGASLDV--------GVIS- 111
L R + RPD ++ +++ + + ++L + + E+ V+ + +V G++S
Sbjct: 91 LFRAIP-RPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSL 149
Query: 112 -----------------SLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKG 154
+++ Y R G ++++ F DV+ W+++++ Y GK
Sbjct: 150 ARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKM 209
Query: 155 EEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC 214
EA LF++M ++ V++ ++ + G + FD + + +T
Sbjct: 210 SEARELFDRMPGRDV----VSWNIMVSGYARRGDMVEARRLFDAAPVR-----DVFTWTA 260
Query: 215 VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMA 260
VV + G L+EA + MP + NA+ W +++A + D A
Sbjct: 261 VVSGYAQNGMLEEARRVFDAMPER-NAVSWNAMVAAYIQRRMMDEA 305
>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 355 bits (910), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 184/445 (41%), Positives = 276/445 (62%), Gaps = 25/445 (5%)
Query: 6 LVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRM 65
+VA +++ + ++G + + +V M ++ W +I + GL D L+ + +M+
Sbjct: 346 VVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQR 405
Query: 66 VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD 125
G RP+ + +SV+S C+ LA L G++IHA++V++ LDV V S L+SMY +CG L
Sbjct: 406 EGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAK 465
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
+ + F DVV+W+S+I Y HG G EA+ +F M +DVTFV +L ACS+
Sbjct: 466 AKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSY 525
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
G +KG+E F+ M KY+ + ++EHY C+VDLLGR G L+EA LI MP++A+AIIW
Sbjct: 526 TGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWG 585
Query: 246 TLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERN 305
LL AC+TH D+A A+++L + P++A P++LLSNI+AS RW V+E R MR+R
Sbjct: 586 ALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRR 645
Query: 306 VKKEPGVSWLEIKNQVHQFTMGDKS-HPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
V K PG SW+ ++ +VH+FT GD S HP EI+ LE L+ ++ GY PD +HD+
Sbjct: 646 VSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHDV 705
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLI---VMLP----------------FKYISEIKN 405
D EEK +L++HSEKLA+A+ GL+ + +P K I+++
Sbjct: 706 DEEEKVQSLEYHSEKLAVAY-----GLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTG 760
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
REII+RDA+RFHHF++G CSC DYW
Sbjct: 761 REIILRDANRFHHFKDGSCSCRDYW 785
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 82/154 (53%), Gaps = 2/154 (1%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F+LD+ S L MY+K G+L + ++V +++V+ W ++I G AQ+GL + L ++
Sbjct: 443 FDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFH 502
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEV-VKAGASLDVGVISSLISMYSRC 120
M G PD +TFV V+S+CS + +G +I + K + + ++ + R
Sbjct: 503 DMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRA 562
Query: 121 GCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGK 153
G L++++ + +D ++W +++ A H K
Sbjct: 563 GKLNEAMDLIEKMPMEADAIIWGALLGACRTHMK 596
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 95/199 (47%), Gaps = 16/199 (8%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E + ++ + L Y+ +G + E +V MP RNV++W ++ G + G+ + +
Sbjct: 157 ERNTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQ 216
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIH--AEVVKAGASLDVGVISSLISMYSRC 120
M P+K +V+S L L Q +I + DV +++I Y +
Sbjct: 217 M------PEK----NVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQV 266
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L ++ F E +VV W++MI Y + + + A LFE M +K N+V++ ++L
Sbjct: 267 GRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEK----NEVSWTAML 322
Query: 181 YACSHCGLKEKGMEFFDLM 199
++CG ++ E F+ M
Sbjct: 323 KGYTNCGRLDEASELFNAM 341
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 118/246 (47%), Gaps = 31/246 (12%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAE-------- 54
E ++V+ +++ Y+K G + E E + MP +NV++W ++ G Q G +
Sbjct: 188 ERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDM 247
Query: 55 ----DVLDQYNLM-------RMVGFRP--DKITFVSVISSCSELATLGQGQQ--IHAEVV 99
DV+ + N++ R+V R D++ +V+S + + Q QQ I ++
Sbjct: 248 MPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLF 307
Query: 100 KAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAIN 159
+ + ++++ Y+ CG LD++ + F VV ++MI +G +G+ +A
Sbjct: 308 EVMPEKNEVSWTAMLKGYTNCGRLDEASELFNAMPIKSVVACNAMILCFGQNGEVPKARQ 367
Query: 160 LFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLL 219
+F+QM +K+ + T+ +++ GL+ +E F +M ++ R ++ ++ +L
Sbjct: 368 VFDQMREKD----EGTWSAMIKVYERKGLELDALELFRMMQREGIRP----NFPSLISVL 419
Query: 220 GRCGYL 225
C L
Sbjct: 420 SVCAGL 425
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 76/153 (49%), Gaps = 10/153 (6%)
Query: 111 SSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFE 170
+SLI+ YSR G ++ + F E +++ W+S++A Y + + +EA N+F++M ++
Sbjct: 102 NSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSER--- 158
Query: 171 ANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAA 230
N +++ L+ + G+ + E FD M ++ + +T +V + G + EA
Sbjct: 159 -NTISWNGLVSGYINNGMINEAREVFDRMPER-----NVVSWTAMVRGYVKEGMISEAET 212
Query: 231 LIRNMPVKANAIIWKTLLSACKTHKSTDMAGRI 263
L MP K N + W +L D A R+
Sbjct: 213 LFWQMPEK-NVVSWTVMLGGLLQEGRIDEACRL 244
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 109/262 (41%), Gaps = 53/262 (20%)
Query: 6 LVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRM 65
+++ +SL Y + G + + V M +N+I+W +++AG QN ++ + +
Sbjct: 98 IISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMF----- 152
Query: 66 VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD 125
DK++ + IS + L+S Y G +++
Sbjct: 153 -----DKMSERNTIS-----------------------------WNGLVSGYINNGMINE 178
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
+ + F +VV W++M+ Y G EA LF QM +K N V++ +L
Sbjct: 179 AREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEK----NVVSWTVMLGGLLQ 234
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRC--GYLDEAAALIRNMPVKANAII 243
G ++ FD+M P + T + G C G L EA L MP + N +
Sbjct: 235 EGRIDEACRLFDMM-------PEKDVVTRTNMIGGYCQVGRLVEARMLFDEMP-RRNVVS 286
Query: 244 WKTLLSACKTHKSTDMAGRIAE 265
W T+++ ++ D+A ++ E
Sbjct: 287 WTTMITGYVQNQQVDIARKLFE 308
>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Vitis vinifera]
Length = 677
Score = 355 bits (910), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 174/444 (39%), Positives = 270/444 (60%), Gaps = 26/444 (5%)
Query: 8 AGS--SLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRM 65
AGS SL + ++++G L ++ MP +NV++W T+I G +QNG E L + M
Sbjct: 239 AGSWNSLINGFVRNGDLDRARELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMFWRMLE 298
Query: 66 VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD 125
G RP+ +T VS + +C+++ L G++IH + G L+ G+ ++L+ MY++CG +
Sbjct: 299 EGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKS 358
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
+ + F+E + D++ WS MI + HG ++A+ F +M+ ++V F+++L ACSH
Sbjct: 359 ASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSH 418
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
G ++G+ FF+ M Y +P ++HYT +VDLLGR G LDEA + I++MP+ + +IW
Sbjct: 419 SGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWG 478
Query: 246 TLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERN 305
L AC+ HK+ +MA AE++L + P+ YV LSN++A+ RW+ V R M+ R
Sbjct: 479 ALFCACRAHKNIEMAELTAEKLLQLEPKHPGSYVFLSNVYAAVGRWEDVERVRTLMKNRG 538
Query: 306 VKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMD 365
V+K+PG S++E++ QVH F GD +H R+ EI L LEE+T+ K GY+P+T +H+++
Sbjct: 539 VEKDPGWSYIEVEGQVHSFVAGDHAHVRAEEISLKLEEITASAKQEGYMPETAWVLHNIE 598
Query: 366 SEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNR 406
EEKE L HSEKLA+AF GLI P KY S++ R
Sbjct: 599 EEEKEDALGSHSEKLALAF-----GLISTAPGSTIRIVKNLRVCGDCHSMMKYASKLSRR 653
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EII+RD RFHHF++G CSCGDYW
Sbjct: 654 EIILRDIKRFHHFKDGTCSCGDYW 677
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 135/342 (39%), Gaps = 69/342 (20%)
Query: 28 VIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELAT 87
+ R N+ + LI G A+N E + + LM + RPD++T V+ S + L
Sbjct: 94 IFRCFDHPNLFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVD 153
Query: 88 LGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSD----VVLWSS 143
+G G+ +H V+K G D V SL+ MY + G L ++ F E + ++LW+
Sbjct: 154 VGLGRCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNV 213
Query: 144 MIAAYGFHGKGEEAINLFEQMEQKEF---------------------------EANDVTF 176
+I G +A +LFE M ++ E N V++
Sbjct: 214 LINGCCKVGDLSKAASLFEAMPERNAGSWNSLINGFVRNGDLDRARELFVQMPEKNVVSW 273
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRK---------------------PRLEHY--- 212
+++ S G EK + F M+++ R R+ +Y
Sbjct: 274 TTMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLSS 333
Query: 213 ----------TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGR 262
T +VD+ +CG + A+ + K + + W ++ H D A +
Sbjct: 334 NGFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGK-DLLTWSVMIWGWAIHGCFDQALQ 392
Query: 263 --IAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMR 302
+ + G+NP + +L+ S QG++ F E+MR
Sbjct: 393 CFVKMKSAGINPDEVIFLAILTACSHSGNVDQGLN-FFESMR 433
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 94/187 (50%), Gaps = 7/187 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+L+ G++L MY K G++ +V ++++ W +I G A +G + L +
Sbjct: 335 GFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCF 394
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV--ISSLISMYS 118
M+ G PD++ F++++++CS + QG E ++ S++ + + ++ +
Sbjct: 395 VKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFF-ESMRLDYSIEPTMKHYTLIVDLLG 453
Query: 119 RCGCLDDSVKTFLECE--YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFE-ANDVT 175
R G LD+++ +F++ D V+W ++ A H E A E++ Q E +
Sbjct: 454 RAGRLDEAL-SFIQSMPINPDFVIWGALFCACRAHKNIEMAELTAEKLLQLEPKHPGSYV 512
Query: 176 FVSLLYA 182
F+S +YA
Sbjct: 513 FLSNVYA 519
Score = 41.2 bits (95), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 110/281 (39%), Gaps = 39/281 (13%)
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
R + F+ +I + + TL Q QIHA++ + V++ LIS LD ++
Sbjct: 37 RSPETHFIPLIHASN---TLPQLHQIHAQIFLHNLFSNSRVVTQLISSSCSLKSLDYALS 93
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA------ 182
F ++ ++ +++++I + + E +++ F M + + +T +L +
Sbjct: 94 IFRCFDHPNLFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVD 153
Query: 183 -----CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
C H G+ + G+E FD V+ +VD+ + G L L P
Sbjct: 154 VGLGRCLHGGVMKLGLE-FDSFVR-----------VSLVDMYVKIGELGFGLQLFDESPQ 201
Query: 238 KANA---IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGV 294
+ A ++W L++ C A + E + ++A + L N
Sbjct: 202 RNKAESILLWNVLINGCCKVGDLSKAASLFE---AMPERNAGSWNSLINGFVRNGDLDRA 258
Query: 295 SEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSM 335
E M E+NV VSW + N Q GD SM
Sbjct: 259 RELFVQMPEKNV-----VSWTTMINGFSQ--NGDHEKALSM 292
>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 184/445 (41%), Positives = 276/445 (62%), Gaps = 25/445 (5%)
Query: 6 LVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRM 65
+VA +++ + ++G + + +V M ++ W +I + GL D L+ + +M+
Sbjct: 346 VVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQR 405
Query: 66 VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD 125
G RP+ + +SV+S C+ LA L G++IHA++V++ LDV V S L+SMY +CG L
Sbjct: 406 EGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAK 465
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
+ + F DVV+W+S+I Y HG G EA+ +F M +DVTFV +L ACS+
Sbjct: 466 AKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSY 525
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
G +KG+E F+ M KY+ + ++EHY C+VDLLGR G L+EA LI MP++A+AIIW
Sbjct: 526 TGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWG 585
Query: 246 TLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERN 305
LL AC+TH D+A A+++L + P++A P++LLSNI+AS RW V+E R MR+R
Sbjct: 586 ALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRR 645
Query: 306 VKKEPGVSWLEIKNQVHQFTMGDKS-HPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
V K PG SW+ ++ +VH+FT GD S HP EI+ LE L+ ++ GY PD +HD+
Sbjct: 646 VSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHDV 705
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLI---VMLP----------------FKYISEIKN 405
D EEK +L++HSEKLA+A+ GL+ + +P K I+++
Sbjct: 706 DEEEKVQSLEYHSEKLAVAY-----GLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTG 760
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
REII+RDA+RFHHF++G CSC DYW
Sbjct: 761 REIILRDANRFHHFKDGSCSCRDYW 785
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 82/154 (53%), Gaps = 2/154 (1%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F+LD+ S L MY+K G+L + ++V +++V+ W ++I G AQ+GL + L ++
Sbjct: 443 FDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFH 502
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEV-VKAGASLDVGVISSLISMYSRC 120
M G PD +TFV V+S+CS + +G +I + K + + ++ + R
Sbjct: 503 DMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRA 562
Query: 121 GCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGK 153
G L++++ + +D ++W +++ A H K
Sbjct: 563 GKLNEAMDLIEKMPMEADAIIWGALLGACRTHMK 596
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 95/199 (47%), Gaps = 16/199 (8%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E + ++ + L Y+ +G + E +V MP RNV++W ++ G + G+ + +
Sbjct: 157 ERNTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQ 216
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIH--AEVVKAGASLDVGVISSLISMYSRC 120
M P+K +V+S L L Q +I + DV +++I Y +
Sbjct: 217 M------PEK----NVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQV 266
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L ++ F E +VV W++MI Y + + + A LFE M +K N+V++ ++L
Sbjct: 267 GRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEK----NEVSWTAML 322
Query: 181 YACSHCGLKEKGMEFFDLM 199
++CG ++ E F+ M
Sbjct: 323 KGYTNCGRLDEASELFNAM 341
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 118/246 (47%), Gaps = 31/246 (12%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAE-------- 54
E ++V+ +++ Y+K G + E E + MP +NV++W ++ G Q G +
Sbjct: 188 ERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDM 247
Query: 55 ----DVLDQYNLM-------RMVGFRP--DKITFVSVISSCSELATLGQGQQ--IHAEVV 99
DV+ + N++ R+V R D++ +V+S + + Q QQ I ++
Sbjct: 248 MPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLF 307
Query: 100 KAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAIN 159
+ + ++++ Y+ CG LD++ + F VV ++MI +G +G+ +A
Sbjct: 308 EVMPEKNEVSWTAMLKGYTNCGRLDEASELFNAMPIKSVVACNAMILCFGQNGEVPKARQ 367
Query: 160 LFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLL 219
+F+QM +K+ + T+ +++ GL+ +E F +M ++ R ++ ++ +L
Sbjct: 368 VFDQMREKD----EGTWSAMIKVYERKGLELDALELFRMMQREGIRP----NFPSLISVL 419
Query: 220 GRCGYL 225
C L
Sbjct: 420 SVCAGL 425
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 76/153 (49%), Gaps = 10/153 (6%)
Query: 111 SSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFE 170
+SLI+ YSR G ++ + F E +++ W+S++A Y + + +EA N+F++M ++
Sbjct: 102 NSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSER--- 158
Query: 171 ANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAA 230
N +++ L+ + G+ + E FD M ++ + +T +V + G + EA
Sbjct: 159 -NTISWNGLVSGYINNGMINEAREVFDRMPER-----NVVSWTAMVRGYVKEGMISEAET 212
Query: 231 LIRNMPVKANAIIWKTLLSACKTHKSTDMAGRI 263
L MP K N + W +L D A R+
Sbjct: 213 LFWQMPEK-NVVSWTVMLGGLLQEGRIDEACRL 244
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 109/262 (41%), Gaps = 53/262 (20%)
Query: 6 LVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRM 65
+++ +SL Y + G + + V M +N+I+W +++AG QN ++ + +
Sbjct: 98 IISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMF----- 152
Query: 66 VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD 125
DK++ + IS + L+S Y G +++
Sbjct: 153 -----DKMSERNTIS-----------------------------WNGLVSGYINNGMINE 178
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
+ + F +VV W++M+ Y G EA LF QM +K N V++ +L
Sbjct: 179 AREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEK----NVVSWTVMLGGLLQ 234
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRC--GYLDEAAALIRNMPVKANAII 243
G ++ FD+M P + T + G C G L EA L MP + N +
Sbjct: 235 EGRIDEACRLFDMM-------PEKDVVTRTNMIGGYCQVGRLVEARMLFDEMP-RRNVVS 286
Query: 244 WKTLLSACKTHKSTDMAGRIAE 265
W T+++ ++ D+A ++ E
Sbjct: 287 WTTMITGYVQNQQVDIARKLFE 308
>gi|224117814|ref|XP_002331638.1| predicted protein [Populus trichocarpa]
gi|222874034|gb|EEF11165.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 180/424 (42%), Positives = 260/424 (61%), Gaps = 25/424 (5%)
Query: 27 KVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELA 86
KV LMP ++++AW ++I G A NG + L Y M G PD T VS++S+C+ELA
Sbjct: 62 KVFELMPEKDIVAWNSVINGFALNGKPNEALTLYKRMGSEGVEPDGFTMVSLLSACAELA 121
Query: 87 TLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYS-DVVLWSSMI 145
TL G++ H +VK G + ++ ++L+ +Y++CG + ++ K F E +VV W+S+I
Sbjct: 122 TLVLGRRAHVYMVKVGLNKNLHANNALLDLYAKCGTISEARKIFDEMGIERNVVSWTSLI 181
Query: 146 AAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRR 205
+G G+EA+ F+ ME++ +++TFV +LYACSHCG+ +G E+F M ++Y
Sbjct: 182 VGLAVNGFGKEALEHFKDMEREGLVPSEITFVGVLYACSHCGIVNEGFEYFKRMKEQYDI 241
Query: 206 KPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAE 265
PR+EHY C+VDLLGR G L EA I++MP++ NA+IW+TLL AC H +
Sbjct: 242 VPRIEHYGCMVDLLGRAGLLKEAYDYIQDMPLQPNAVIWRTLLGACTIHGHLGLGAFARA 301
Query: 266 EILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFT 325
+L + P+D+ YVLLSN++AS +RW V E R M V+K PG S +E+ N VH+F
Sbjct: 302 RLLQLEPKDSGDYVLLSNLYASEQRWSDVHEVRRTMLSEGVRKTPGYSLVELGNHVHEFV 361
Query: 326 MGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFA 385
MGD++HP+S I L E+ ++KL GYVP T + D++ EEKE L +HSEK+AIAF
Sbjct: 362 MGDRTHPQSEAIYKMLVEMAMKLKLAGYVPHTANVLADIEEEEKESALFYHSEKIAIAFM 421
Query: 386 EHTRGLIVMLP-------------------FKYISEIKNREIIVRDASRFHHFRNGKCSC 426
LI LP K IS++ R+I+VRD SRFHHFR+G CSC
Sbjct: 422 -----LINTLPGTPIRIIKNLRVCADCHFAIKLISKVFERDIVVRDCSRFHHFRDGSCSC 476
Query: 427 GDYW 430
DYW
Sbjct: 477 RDYW 480
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 79/182 (43%), Gaps = 29/182 (15%)
Query: 95 HAEVVKAGASLDVGVISSLISMYSRC-------GC-------------LDDSVKTFLECE 134
H + VK G V ++++S YS+C C LD + + E
Sbjct: 1 HCQAVKPGIFSHGYVANNILSRYSKCVVGDLNLACKLFDEMPHKDTVTLDTMITAYFESA 60
Query: 135 YS--------DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHC 186
Y D+V W+S+I + +GK EA+ L+++M + E + T VSLL AC+
Sbjct: 61 YKVFELMPEKDIVAWNSVINGFALNGKPNEALTLYKRMGSEGVEPDGFTMVSLLSACAEL 120
Query: 187 GLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKT 246
G MVK K L ++DL +CG + EA + M ++ N + W +
Sbjct: 121 ATLVLGRRAHVYMVKVGLNK-NLHANNALLDLYAKCGTISEARKIFDEMGIERNVVSWTS 179
Query: 247 LL 248
L+
Sbjct: 180 LI 181
>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
Length = 630
Score = 354 bits (909), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 174/434 (40%), Positives = 267/434 (61%), Gaps = 24/434 (5%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y ++G L E + V MP ++ ++W ++A +Q G +E+ L + M G ++ F
Sbjct: 202 YAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAF 261
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
V+S+C+++A L G Q+H +++AG + V ++L++MY +CG ++D+ F E E
Sbjct: 262 ACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEE 321
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
DVV W++MIA Y HG G+EA+ +F+ M + +D+T V +L ACSH GL EKG+ +
Sbjct: 322 RDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISY 381
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK 255
F M + + EHYTC++DLLGR G L EA L+++MP + ++ +W LL A + H+
Sbjct: 382 FYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHR 441
Query: 256 STDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWL 315
+ ++ AE+I + P++A YVLLSNI+AS+ +W+ + R M ER VKK PG SW+
Sbjct: 442 NPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWI 501
Query: 316 EIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKH 375
E++N+VH F+ GD HP +I +LE+L MK GYV T +HD++ EEKE+ LK+
Sbjct: 502 EVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKY 561
Query: 376 HSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREIIVRDASRF 416
HSEKLA+A+ G++ + P FKYIS I+ R I++RD++RF
Sbjct: 562 HSEKLAVAY-----GILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRLILLRDSNRF 616
Query: 417 HHFRNGKCSCGDYW 430
HHFR G CSCGDYW
Sbjct: 617 HHFRGGSCSCGDYW 630
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/311 (20%), Positives = 140/311 (45%), Gaps = 18/311 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+V+ + + Y + G +VE ++ P+R+V W +++G AQNG+ E+ ++ M
Sbjct: 98 DVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAM- 156
Query: 65 MVGFRPDK--ITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
P++ +++ +++++ + + + + E+ +V +++++ Y++ G
Sbjct: 157 -----PERNAVSWNAMVAAYIQRRMMDEAK----ELFNMMPCRNVASWNTMLTGYAQAGM 207
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
L+++ F D V W++M+AAY G EE + LF +M + N F +L
Sbjct: 208 LEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLST 267
Query: 183 CSHCGLKEKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
C+ E GM+ +++ Y + + ++ + +CG +++A M + +
Sbjct: 268 CADIAALECGMQLHGRLIRAGYGVGCFVGN--ALLAMYFKCGNMEDARNAFEEMEER-DV 324
Query: 242 IIWKTLLSACKTHKSTDMAGRIAE--EILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
+ W T+++ H A I + P D +L+ S +G+S F
Sbjct: 325 VSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYS 384
Query: 300 AMRERNVKKEP 310
+ V +P
Sbjct: 385 MHHDFGVTAKP 395
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 95/198 (47%), Gaps = 25/198 (12%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ + G++L MY K G++ + M R+V++W T+IAG A++G ++ L+ +
Sbjct: 288 GYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIF 347
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASL------DVGVISS-- 112
++MR +PD IT V V+++CS H+ +V+ G S D GV +
Sbjct: 348 DMMRTTSTKPDDITLVGVLAACS-----------HSGLVEKGISYFYSMHHDFGVTAKPE 396
Query: 113 ----LISMYSRCGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQK 167
+I + R G L ++ + + D +W +++ A H E + E++ +
Sbjct: 397 HYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFEL 456
Query: 168 EFE-ANDVTFVSLLYACS 184
E E A +S +YA S
Sbjct: 457 EPENAGMYVLLSNIYASS 474
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 107/220 (48%), Gaps = 18/220 (8%)
Query: 31 LMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQ 90
L P ++ ++W ++A +NG E+ +N D I++ +++S + + +
Sbjct: 31 LAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRT----EWDVISWNALMSGYVQWGKMSE 86
Query: 91 GQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGF 150
+++ + DV + ++S Y+R G + ++ + F DV W+++++ Y
Sbjct: 87 ARELFDRM----PGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQ 142
Query: 151 HGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLE 210
+G EEA +F+ M ++ N V++ +++ A + ++ E F++M + +
Sbjct: 143 NGMLEEARRVFDAMPER----NAVSWNAMVAAYIQRRMMDEAKELFNMMPCR-----NVA 193
Query: 211 HYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+ ++ + G L+EA A+ MP K +A+ W +L+A
Sbjct: 194 SWNTMLTGYAQAGMLEEAKAVFDTMPQK-DAVSWAAMLAA 232
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 94/221 (42%), Gaps = 22/221 (9%)
Query: 32 MPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQG 91
MP+R+ + + +I+ A +GL ++L P+K +S LA +
Sbjct: 1 MPVRDSVTYNVMISSHANHGLVSLARHYFDLA------PEK----DAVSWNGMLAAYVRN 50
Query: 92 QQIHAE--VVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYG 149
++ + + DV ++L+S Y + G + ++ + F DVV W+ M++ Y
Sbjct: 51 GRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYA 110
Query: 150 FHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRL 209
G EA LF+ ++ T+ +++ + G+ E+ FD M ++
Sbjct: 111 RRGDMVEARRLFDAAPVRDV----FTWTAVVSGYAQNGMLEEARRVFDAMPER-----NA 161
Query: 210 EHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+ +V + +DEA L MP + N W T+L+
Sbjct: 162 VSWNAMVAAYIQRRMMDEAKELFNMMPCR-NVASWNTMLTG 201
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 70/150 (46%), Gaps = 10/150 (6%)
Query: 111 SSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFE 170
+ +++ Y R G ++++ F DV+ W+++++ Y GK EA LF++M ++
Sbjct: 41 NGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDV- 99
Query: 171 ANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAA 230
V++ ++ + G + FD + + +T VV + G L+EA
Sbjct: 100 ---VSWNIMVSGYARRGDMVEARRLFDAAPVR-----DVFTWTAVVSGYAQNGMLEEARR 151
Query: 231 LIRNMPVKANAIIWKTLLSACKTHKSTDMA 260
+ MP + NA+ W +++A + D A
Sbjct: 152 VFDAMPER-NAVSWNAMVAAYIQRRMMDEA 180
>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 624
Score = 354 bits (909), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 179/450 (39%), Positives = 275/450 (61%), Gaps = 26/450 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + ++L MY + + + ++ M R++ W +I A++G+ + L +
Sbjct: 181 GLDYGHFVCATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFF 240
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ MR G PDK+ V+V+ +C++L + + + IHA + G SLDV + +++I MY++C
Sbjct: 241 DRMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKC 300
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ + F + +V+ WS+MIAAYG+HG+GE+A+ LF M + N +TFVSLL
Sbjct: 301 GSVESARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLL 360
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
YACSH GL E+G FF M +Y P ++HYTC+VDLLGR G LDEA +I MPV+ +
Sbjct: 361 YACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKD 420
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
++W LL AC+ H+ D+A R+A +L + Q YVLLSNI+A+A +W+ +++ R+
Sbjct: 421 EVLWGALLGACRIHRHLDLAERVARSLLKLQSQKPGHYVLLSNIYANAGKWEDMAKTRDL 480
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M + ++K PG +W+E+ +++QF +GDK+HPRS EI L+ L ++++ GY PDT
Sbjct: 481 MTKGGLRKIPGRTWIEVGEKLYQFGVGDKTHPRSNEIYKMLKRLGEKLEVAGYHPDTNDV 540
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP--------------------FKYI 400
++D+D E K+ L HSEKLAIAF GL+V LP K++
Sbjct: 541 LYDVDEEVKQGLLYSHSEKLAIAF-----GLLV-LPQGHPIRITKNLRVCGDCHTFCKFV 594
Query: 401 SEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
S I+ + IIVRDA RFHHF+ G CSC DYW
Sbjct: 595 SLIEQKTIIVRDAKRFHHFKEGVCSCRDYW 624
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 120/256 (46%), Gaps = 2/256 (0%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
+L + L +MY++ G+L + +++ M R+ +W ++ G A+ G + +
Sbjct: 84 NLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVIVGGYAKVGNFFSCFWMFRELL 143
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G D + VI +C +L L G+ IH +K G V ++L+ MY+RC ++
Sbjct: 144 RSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDYGHFVCATLVDMYARCKVVE 203
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D+ + F++ D+ W+ MI A G E++ F++M + + V V+++YAC+
Sbjct: 204 DAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMRNQGIVPDKVALVTVVYACA 263
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
G K + + + T ++D+ +CG ++ A + M V+ N I W
Sbjct: 264 KLGAMNKA-KAIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARWIFDRMQVR-NVITW 321
Query: 245 KTLLSACKTHKSTDMA 260
+++A H + A
Sbjct: 322 SAMIAAYGYHGQGEKA 337
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 78/193 (40%), Gaps = 31/193 (16%)
Query: 71 DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTF 130
D F S + SC L Q +Q+HA++ GA ++ V + L+ MY G L+D+ + F
Sbjct: 52 DTKRFRSSLLSCRNLF---QVRQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELF 108
Query: 131 LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS------ 184
WS ++ Y G +F ++ + +D + ++ AC
Sbjct: 109 DGMSKRHPYSWSVIVGGYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLK 168
Query: 185 -----HCGLKEKGMEFFDLMVKKYRRKPRLEHYTC--VVDLLGRCGYLDEAAALIRNMPV 237
HC + G+++ H+ C +VD+ RC +++A + M
Sbjct: 169 CGRLIHCITLKCGLDY--------------GHFVCATLVDMYARCKVVEDAHQIFVKM-W 213
Query: 238 KANAIIWKTLLSA 250
K + W ++ A
Sbjct: 214 KRDLATWTVMIGA 226
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 354 bits (909), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 171/449 (38%), Positives = 267/449 (59%), Gaps = 24/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF + L ++L MY K + + R+V+ W +++ AQ + + +
Sbjct: 328 GFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLF 387
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ MR G RP K+T VS++S C+ L G+ +H+ + K +D + ++L+ MY++C
Sbjct: 388 DQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKC 447
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ + + F+E D+ +W+++I + HG GEEA+++F +ME++ + ND+TF+ LL
Sbjct: 448 GDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLL 507
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
+ACSH GL +G + F+ MV + P++EHY C+VDLLGR G LDEA +I++MP+K N
Sbjct: 508 HACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPN 567
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
I+W L++AC+ HK+ + A ++L + P++ VL+SNI+A+A RW + R+
Sbjct: 568 TIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKT 627
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+ +KKEPG S +E+ VH+F MGD+SHP+ I+ L E+ ++ GYVPDT
Sbjct: 628 MKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTV 687
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
+ ++D EEKE L +HSEKLA+AF GLI P K +S
Sbjct: 688 LLNIDEEEKETALTYHSEKLAMAF-----GLISTAPSTPIRIVKNLRVCNDCHAATKLLS 742
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+I R IIVRD +RFHHFR G CSCGDYW
Sbjct: 743 KIYGRVIIVRDRNRFHHFREGYCSCGDYW 771
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 132/271 (48%), Gaps = 12/271 (4%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L MY K G L ++ + + V++W +IAG ++ E+ + M+
Sbjct: 236 TALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIF 295
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P++IT +S+I C L G+Q+HA +++ G S+ + + ++L+ MY +C + ++
Sbjct: 296 PNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARAL 355
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F + DV++W++M++AY ++A NLF+QM VT VSLL C+ G
Sbjct: 356 FDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGAL 415
Query: 190 EKGMEFFDLMVKKYRRKPRLE----HYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
+ G V Y K R+E T +VD+ +CG ++ A L + + +W
Sbjct: 416 DLGK-----WVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIE-AISRDICMWN 469
Query: 246 TLLSACKTHKSTDMAGRIAEEI--LGVNPQD 274
+++ H + A I E+ GV P D
Sbjct: 470 AIITGFAMHGYGEEALDIFAEMERQGVKPND 500
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 139/286 (48%), Gaps = 6/286 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + D+ G++L MY + + V M R+V++W T+I ++N + L+
Sbjct: 124 GLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELI 183
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV--ISSLISMYS 118
M + RP ++ VS+++ ++ A + G+ +HA V++ + +GV ++L+ MY+
Sbjct: 184 REMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYA 243
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+CG L + + F VV W++MIA + EE LF +M+++ N++T +S
Sbjct: 244 KCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLS 303
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
L+ C G + G + +++ L T +VD+ G+C + A AL + +
Sbjct: 304 LIVECGFTGALQLGKQLHAYILRN-GFSVSLALATALVDMYGKCSDIRNARALFDSTQNR 362
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLS 282
+ +IW +LSA D A + +++ GV P LLS
Sbjct: 363 -DVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLS 407
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 96/201 (47%), Gaps = 18/201 (8%)
Query: 77 SVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYS 136
SV+ +C +++ G++IH V+K G DV V ++L+ MY C C++ + F +
Sbjct: 99 SVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMER 158
Query: 137 DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL--LYACSHCGLKEKGME 194
DVV WS+MI + + + + A+ L +M + ++V VS+ L+A + K M
Sbjct: 159 DVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMH 218
Query: 195 FFDLMVKKYRRKPRLEHY-----TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
+ + R EH T ++D+ +CG+L A L + K + W +++
Sbjct: 219 AYVI------RNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQK-TVVSWTAMIA 271
Query: 250 AC----KTHKSTDMAGRIAEE 266
C + + T + R+ EE
Sbjct: 272 GCIRSNRLEEGTKLFIRMQEE 292
>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
Length = 703
Score = 354 bits (909), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 185/470 (39%), Positives = 279/470 (59%), Gaps = 46/470 (9%)
Query: 7 VAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNG---LAEDVLDQ---- 59
V +++ Y +SG + E ++ + MP++ V A +I G NG A V DQ
Sbjct: 234 VTWTAMLKGYTRSGRINEAAELFKAMPVKPVAACNGMIMGFGLNGEVGKARWVFDQMKEK 293
Query: 60 ------------------------YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
++LM+ G RP+ + +S++S C LA+L G+Q+H
Sbjct: 294 DDGTWSALIKIYERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQVH 353
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGE 155
+++V++ LD+ V S LI+MY +CG L + F D+V+W+S+IA Y HG GE
Sbjct: 354 SQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQHGFGE 413
Query: 156 EAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV 215
+A+ +F +M +++TF+ +L AC + G ++G+E F+ M KY+ + EHY C+
Sbjct: 414 KALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMKSKYQVDQKTEHYACM 473
Query: 216 VDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDA 275
VDLLGR G L+EA LI NMPV+A+AI+W LLSAC+THK+ D+A A+++L + P A
Sbjct: 474 VDLLGRAGKLNEAMNLIENMPVEADAIVWGALLSACRTHKNLDLAEIAAKKLLQLEPSSA 533
Query: 276 APYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFT-MGDKSHPRS 334
PY+LLSN++AS RW+ V+E R+ MR RNV K PG SW+E+ N+VH FT G SHP
Sbjct: 534 GPYILLSNLYASQSRWKDVAELRKTMRARNVSKSPGCSWIEVDNKVHMFTGGGSASHPEH 593
Query: 335 MEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFA----EHTRG 390
I LE+L + ++ GY PD MHD+D E+K ++L+HHSEK+A+A+ +
Sbjct: 594 EMIMKKLEKLGASLREAGYCPDGSFVMHDVDEEDKVHSLRHHSEKMAVAYGLLKVPVGKP 653
Query: 391 LIVM----------LPFKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+ VM K I+++ REII+RDA+RFHHF++G CSC D+W
Sbjct: 654 IRVMKNLRVCGDCHSAIKLIAQVTGREIILRDANRFHHFKDGLCSCRDFW 703
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 84/153 (54%), Gaps = 4/153 (2%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F+LD+ S L MY+K G LV G++V ++++ W ++IAG AQ+G E L+ ++
Sbjct: 361 FDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFH 420
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV--ISSLISMYSR 119
M G PD+ITF+ V+S+C + +G +I E +K+ +D + ++ + R
Sbjct: 421 EMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIF-ESMKSKYQVDQKTEHYACMVDLLGR 479
Query: 120 CGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFH 151
G L++++ +D ++W ++++A H
Sbjct: 480 AGKLNEAMNLIENMPVEADAIVWGALLSACRTH 512
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 101/205 (49%), Gaps = 22/205 (10%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E + ++ + L Y+K+G + E KV MP RNV++W +++ G Q GL +D+ L
Sbjct: 75 ERNTISWNGLVSGYVKNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGL----IDEAEL 130
Query: 63 M--RMVGFRPDK--ITFVSVISSCSELATLGQGQQIHAEV-VKAGASLDVGVISSLISMY 117
+ RM P+K +++ ++ E + + +++ + VK DV +++I
Sbjct: 131 LFWRM----PEKNVVSWTVMLGGLIEDGRVDEARRLFDMIPVK-----DVVASTNMIGGL 181
Query: 118 SRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
G L ++ + F E +VV W+SMI+ Y + K + A LFE M K N+VT+
Sbjct: 182 CSEGRLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVMPDK----NEVTWT 237
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKK 202
++L + G + E F M K
Sbjct: 238 AMLKGYTRSGRINEAAELFKAMPVK 262
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 134/306 (43%), Gaps = 21/306 (6%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+VA +++ G L E ++ MP RNV+AW ++I+G A N + + +M
Sbjct: 170 DVVASTNMIGGLCSEGRLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVM- 228
Query: 65 MVGFRPDK--ITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
PDK +T+ +++ + + + AE+ KA V + +I + G
Sbjct: 229 -----PDKNEVTWTAMLKGYTRSGRINEA----AELFKAMPVKPVAACNGMIMGFGLNGE 279
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
+ + F + + D WS++I Y G EA+ LF M+++ N + +S+L
Sbjct: 280 VGKARWVFDQMKEKDDGTWSALIKIYERKGFELEALALFSLMQREGVRPNFPSIISILSV 339
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHY--TCVVDLLGRCGYLDEAAALIRNMPVKAN 240
C + G + +V+ + L+ Y + ++ + +CG L + K +
Sbjct: 340 CGSLASLDHGRQVHSQLVRSHF---DLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSK-D 395
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
++W ++++ H + A + E+ G P + +LS + K +G+ F
Sbjct: 396 IVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIF- 454
Query: 299 EAMRER 304
E+M+ +
Sbjct: 455 ESMKSK 460
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 102/228 (44%), Gaps = 21/228 (9%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDK--I 73
Y + E +K+ MP RN I+W L++G +NG+ + ++ M P++ +
Sbjct: 57 YFHNKRPAEAQKLFDKMPERNTISWNGLVSGYVKNGMISEARKVFDKM------PERNVV 110
Query: 74 TFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLEC 133
++ S++ + + + + + + + ++ LI G +D++ + F
Sbjct: 111 SWTSMVRGYVQEGLIDEAELLFWRMPEKNVVSWTVMLGGLI----EDGRVDEARRLFDMI 166
Query: 134 EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGM 193
DVV ++MI G+ EA +F++M Q+ N V + S++ + +
Sbjct: 167 PVKDVVASTNMIGGLCSEGRLSEAREIFDEMPQR----NVVAWTSMISGYAMNNKVDVAR 222
Query: 194 EFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
+ F++M K +T ++ R G ++EAA L + MPVK A
Sbjct: 223 KLFEVMPDKNEVT-----WTAMLKGYTRSGRINEAAELFKAMPVKPVA 265
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 103/243 (42%), Gaps = 23/243 (9%)
Query: 114 ISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEAND 173
IS ++R G +D + F + + V W++++A Y + + EA LF++M ++ N
Sbjct: 23 ISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKLFDKMPER----NT 78
Query: 174 VTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIR 233
+++ L+ G+ + + FD M ++ + +T +V + G +DEA L
Sbjct: 79 ISWNGLVSGYVKNGMISEARKVFDKMPER-----NVVSWTSMVRGYVQEGLIDEAELLFW 133
Query: 234 NMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQG 293
MP K N + W +L D A R+ + I +D + S R
Sbjct: 134 RMPEK-NVVSWTVMLGGLIEDGRVDEARRLFDMI---PVKDVVASTNMIGGLCSEGRLSE 189
Query: 294 VSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSH--PRSMEIDLYLEELTSEMKLR 351
E + M +RNV V+W + + + M +K + E+ E+T L+
Sbjct: 190 AREIFDEMPQRNV-----VAWTSM---ISGYAMNNKVDVARKLFEVMPDKNEVTWTAMLK 241
Query: 352 GYV 354
GY
Sbjct: 242 GYT 244
>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Vitis vinifera]
Length = 703
Score = 354 bits (908), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 175/444 (39%), Positives = 274/444 (61%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E D S++ MY K G+++ KV + +NV++W ++A +QNG E+ L+ +
Sbjct: 260 GAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFF 319
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M + G P++ TF +++SC+ ++ LG G+ +H + K+G + V ++LI+MYS+
Sbjct: 320 PEMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKS 379
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ + K FLE D + WS+MI HG G EA+ +F++M + + VTFV +L
Sbjct: 380 GSIEAAHKVFLEMICRDSITWSAMICGLSHHGLGREALVVFQEMLAAKECPHYVTFVGVL 439
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+H G ++G + + ++K+ +P +EHYTC+V LL + G LDEA +++ PVK +
Sbjct: 440 SACAHLGSVQEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAGRLDEAENFMKSTPVKWD 499
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+ W+TLLSAC H++ + ++AE +L ++P D Y+LLSN++A AKRW GV + R+
Sbjct: 500 VVAWRTLLSACHVHQNYGLGKKVAELVLQMDPGDVGTYILLSNMYAKAKRWDGVVKIRKL 559
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
MRERNVKKEPG SW+EI+N +H F K+HP S +I ++EL + ++ GYVPD A
Sbjct: 560 MRERNVKKEPGASWIEIRNSIHVFVSEGKTHPESNQIYEKVQELLTMIRPMGYVPDIAAV 619
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNR 406
HD++ E+K + +HSEKLAIA+ + G + + K IS++ NR
Sbjct: 620 FHDVEDEQKREYVSYHSEKLAIAYGLMKTPSGAPIRVIKNLRMCVDCHSAVKLISKVTNR 679
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
IIVRDA+RFH F +G CSC DYW
Sbjct: 680 MIIVRDANRFHCFGDGGCSCADYW 703
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 143/308 (46%), Gaps = 12/308 (3%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L MY + + V +P +V ++ +I G +NG + L+ + M
Sbjct: 168 NALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLENGYPSEALEVLDRMVDECIV 227
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
D +T+V+ CS L L G Q+H + + GA D V S++I MY +CG + ++ K
Sbjct: 228 WDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKV 287
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F + +VV W++++AAY +G EEA+N F +ME N+ TF LL +C+ G+
Sbjct: 288 FNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSCA--GIS 345
Query: 190 EKGM-EFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
G + +KK + + ++++ + G ++ A + M + ++I W ++
Sbjct: 346 ALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVFLEMICR-DSITWSAMI 404
Query: 249 SACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSE----FREAMRER 304
H A + +E+L ++ YV + ++ V E + M++
Sbjct: 405 CGLSHHGLGREALVVFQEMLAA--KECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQT 462
Query: 305 NVKKEPGV 312
+ EPGV
Sbjct: 463 GI--EPGV 468
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 140/284 (49%), Gaps = 9/284 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
++V +SL ++Y K ++ + M RNV++W L+AG NGL +VL + M
Sbjct: 61 NIVQVNSLINLYAKCDQIMVARILFDGMRKRNVVSWGALMAGYFHNGLVLEVLRLFKTMI 120
Query: 65 MVGF-RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
V + RP++ F ++ISSCS+ + +G Q H +K+G V ++LI MYSR +
Sbjct: 121 SVDYMRPNEYIFATIISSCSDSGQVVEGWQCHGYALKSGLVFHQYVKNALICMYSRRSDV 180
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
++ + E DV ++ +I +G EA+ + ++M + ++VT+V+ C
Sbjct: 181 KGAMSVWYEVPGLDVFSYNIIINGLLENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLC 240
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHY--TCVVDLLGRCGYLDEAAALIRNMPVKANA 241
SH G++ + + +R + + + ++D+ G+CG + A + + K N
Sbjct: 241 SHLKDLRLGLQ---VHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTK-NV 296
Query: 242 IIWKTLLSACKTHKSTDMAGRIAE--EILGVNPQDAAPYVLLSN 283
+ W +L+A + + A E+ G+ P + VLL++
Sbjct: 297 VSWTAILAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNS 340
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 62/122 (50%), Gaps = 3/122 (2%)
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASL--DVGVISSLISMYSRCGCLDDSVKTFLEC 133
+ ++ ++ L G+ IHA ++ + ++ ++SLI++Y++C + + F
Sbjct: 29 IQLLKVSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGM 88
Query: 134 EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEF-EANDVTFVSLLYACSHCGLKEKG 192
+VV W +++A Y +G E + LF+ M ++ N+ F +++ +CS G +G
Sbjct: 89 RKRNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEG 148
Query: 193 ME 194
+
Sbjct: 149 WQ 150
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 354 bits (908), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 180/445 (40%), Positives = 273/445 (61%), Gaps = 16/445 (3%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F D+ G+++ MY K G + V +P ++VI+W T+I+G AQNG A + ++ YN
Sbjct: 380 FLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYN 439
Query: 62 LMRMVG--FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+M G ++ T+VSV+ +CS+ L QG ++H ++K G LDV V +SL MY +
Sbjct: 440 IMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGK 499
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG LDD++ F + + V W+++IA +GFHG GE+A+ LF++M + + + +TFV+L
Sbjct: 500 CGRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTL 559
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L ACSH GL ++G F++M Y P L+HY C+VDL GR G L+ A I++MP++
Sbjct: 560 LSACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNFIKSMPLQP 619
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
+A IW LLSAC+ H + D+ +E + V P+ +VLLSN++ASA +W+GV E R
Sbjct: 620 DASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRS 679
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
+ ++K PG S +E+ N+V F G+++HP E+ L L ++K+ GYVPD
Sbjct: 680 ITSGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALHEKLKMVGYVPDHRF 739
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPF--------------KYISEIKN 405
+ D++ +EKE+ L HSE+LA+AFA T + K+IS+I
Sbjct: 740 VLQDVEDDEKEHILMSHSERLAMAFALITTPAKTTIRIFKNLRVCGDCHSVTKFISKITE 799
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
REIIVRD++RFHHF+NG CSCGDYW
Sbjct: 800 REIIVRDSNRFHHFKNGVCSCGDYW 824
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 130/255 (50%), Gaps = 15/255 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D+ +SL H+Y + G++V + MP R++ +W +I+G Q+G A++ L
Sbjct: 180 GFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTLS 239
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ +R + D +T VS++S+C+E +G IH+ +K G ++ V + LI +Y+
Sbjct: 240 DGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEF 295
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L D K F D++ W+S+I AY + + AI LF++M + + +T +SL
Sbjct: 296 GSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLA 355
Query: 181 YACSHCGLKE--KGMEFFDLMVKKYRRKPRLEHYT---CVVDLLGRCGYLDEAAALIRNM 235
S G + ++ F L R+ LE T VV + + G +D A A+ +
Sbjct: 356 SILSQLGEIRACRSVQGFTL-----RKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWL 410
Query: 236 PVKANAIIWKTLLSA 250
P K + I W T++S
Sbjct: 411 PNK-DVISWNTIISG 424
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 119/247 (48%), Gaps = 10/247 (4%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL-M 63
++ + L ++Y G++ + R+V AW +I+G + G + +V+ ++L M
Sbjct: 85 NVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISGYGRAGYSSEVIRCFSLFM 144
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
G +PD TF SV+ +C + G +IH +K G DV V +SLI +Y R G +
Sbjct: 145 LSSGLQPDYRTFPSVLKACRNVT---DGNKIHCLALKFGFMWDVYVAASLIHLYCRYGAV 201
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
++ F E D+ W++MI+ Y G +EA+ L + + + VT VSLL AC
Sbjct: 202 VNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTLSDGLRAMD----SVTVVSLLSAC 257
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
+ G +G+ + K+ + L ++DL G L + + M V+ + I
Sbjct: 258 TEAGDFNRGVTIHSYSI-KHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVR-DLIS 315
Query: 244 WKTLLSA 250
W +++ A
Sbjct: 316 WNSIIKA 322
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 78/160 (48%), Gaps = 12/160 (7%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G LD+ G+SLA MY K G L + + +P N + W TLIA +G E + +
Sbjct: 482 GLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLF 541
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSL------I 114
M G +PD ITFV+++S+CS + +G+ E+++ D G+ SL +
Sbjct: 542 KEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCF-EMMQT----DYGITPSLKHYGCMV 596
Query: 115 SMYSRCGCLDDSVKTFLECEYS-DVVLWSSMIAAYGFHGK 153
+Y R G L+ ++ D +W ++++A HG
Sbjct: 597 DLYGRAGQLEIALNFIKSMPLQPDASIWGALLSACRVHGN 636
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Query: 86 ATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMI 145
L + +HA +V + A +V + + L+++Y G + + TF DV W+ MI
Sbjct: 65 TNLQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMI 124
Query: 146 AAYGFHGKGEEAINLFEQ-MEQKEFEANDVTFVSLLYAC 183
+ YG G E I F M + + TF S+L AC
Sbjct: 125 SGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKAC 163
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 353 bits (907), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 181/441 (41%), Positives = 264/441 (59%), Gaps = 14/441 (3%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
+DL G++L HMY K G+ + ++V M RNV W +I+G AQ+G + + M
Sbjct: 468 VDLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQM 527
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
G PD T+VS++S+C+ L +++H+ V AG D+ V ++L+ MY++CG +
Sbjct: 528 LREGIVPDATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSV 587
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
DD+ + F + DV W+ MI HG+G +A++LF +M+ + F+ N +FV++L AC
Sbjct: 588 DDARRVFDDMLERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSAC 647
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
SH GL ++G F + + Y +P +EHYTC+VDLLGR G L+EA I NMP++
Sbjct: 648 SHAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGDAP 707
Query: 244 WKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
W LL AC T+ + +MA A+E L + P+ A+ YVLLSNI+A+ W+ R M+
Sbjct: 708 WGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGNWEQKLLVRSMMQR 767
Query: 304 RNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHD 363
R ++KEPG SW+E+ NQ+H F +GD SHP S EI L++L +K GYVPDT + +
Sbjct: 768 RGIRKEPGRSWIEVDNQIHSFVVGDTSHPESKEIYAKLKDLIKRLKAEGYVPDTRLVLRN 827
Query: 364 MDSEEKEYNLKHHSEKLAIAFA-EHT--RGLIVM-----------LPFKYISEIKNREII 409
D E KE L HSEKLAI + HT R I + K+IS++ REI+
Sbjct: 828 TDQEYKEQALCSHSEKLAIVYGLMHTPYRNPIRVYKNLRVCSDCHTATKFISKVTGREIV 887
Query: 410 VRDASRFHHFRNGKCSCGDYW 430
RDA RFHHF++G CSCGDYW
Sbjct: 888 ARDAKRFHHFKDGVCSCGDYW 908
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 156/304 (51%), Gaps = 15/304 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ D+ ++L +MY+K GS+ + + + M RNVI+W +I G A G ++ ++
Sbjct: 60 GFQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRF 119
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ GF P+ T+VS++++ + L +++H+ V AG +LD+ V ++L+ MY++
Sbjct: 120 LQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKS 179
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +DD+ F D+ W+ MI HG+G+EA +LF QME+ N T++S+L
Sbjct: 180 GSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSIL 239
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKP----RLEHYTCVVDLLGRCGYLDEAAALIRNM- 235
A + + G + V K+ K L ++ + +CG +D+A + M
Sbjct: 240 NASA---ITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMC 296
Query: 236 ---PVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQ 292
+ NA+I + C H++ + ++ +E G P D+ Y+ L N H S W+
Sbjct: 297 DRDVISWNAMIGGLAQNGCG-HEAFTIFLKMQQE--GFVP-DSTTYLSLLNTHVSTGAWE 352
Query: 293 GVSE 296
V E
Sbjct: 353 WVKE 356
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 144/301 (47%), Gaps = 12/301 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF DL G++L HMY K GS+ + V M R+VI+W +I G AQNG + +
Sbjct: 264 GFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIF 323
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ GF PD T++S++++ +++H V+ G D+ V S+ + MY RC
Sbjct: 324 LKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRC 383
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +DD+ F + +V W++MI G EA++LF QM ++ F + TFV++L
Sbjct: 384 GSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNIL 443
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY---TCVVDLLGRCGYLDEAAALIRNMPV 237
A + E+ +E+ V Y L +V + +CG A + +M V
Sbjct: 444 SA----NVGEEALEWVK-EVHSYAIDAGLVDLRVGNALVHMYAKCGNTMYAKQVFDDM-V 497
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVS 295
+ N W ++S H A + ++L G+ P DA YV + + AS + V
Sbjct: 498 ERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVP-DATTYVSILSACASTGALEWVK 556
Query: 296 E 296
E
Sbjct: 557 E 557
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 114/212 (53%), Gaps = 2/212 (0%)
Query: 43 LIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAG 102
+I G A+ G AED + Y+ MR G +P++IT++S++ +C +L G++IHA ++++G
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 103 ASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFE 162
DV V ++L++MY +CG +DD+ F + +V+ W+ MI +G+G+EA + F
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120
Query: 163 QMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRC 222
QM+++ F N T+VS+L A + G E E V L +V + +
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNA-GLALDLRVGNALVHMYAKS 179
Query: 223 GYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
G +D+A + M V+ + W ++ H
Sbjct: 180 GSIDDARVVFDGM-VERDIFSWTVMIGGLAQH 210
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 107/215 (49%), Gaps = 17/215 (7%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G DL G++L HMY K GS+ + +V M R+V +W +I G AQ+G D LD +
Sbjct: 566 GLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLERDVYSWTVMIGGLAQHGRGLDALDLF 625
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV------ISSLI 114
M++ GF+P+ +FV+V+S+CS + +G++ + + D G+ + ++
Sbjct: 626 VKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQ-----DYGIEPTMEHYTCMV 680
Query: 115 SMYSRCGCLDDSVKTFLE--CEYSDVVLWSSMIAAYGFHGKGEEA-INLFEQMEQKEFEA 171
+ R G L+++ L E D W +++ A +G E A E+++ K A
Sbjct: 681 DLLGRAGQLEEAKHFILNMPIEPGDAP-WGALLGACVTYGNLEMAEFAAKERLKLKPKSA 739
Query: 172 NDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRK 206
+ +S +YA + G E+ + +M ++ RK
Sbjct: 740 STYVLLSNIYAAT--GNWEQKLLVRSMMQRRGIRK 772
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 353 bits (907), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 179/446 (40%), Positives = 261/446 (58%), Gaps = 18/446 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF DL ++L +Y K G++ E + IAW L++G Q+G E+ L +
Sbjct: 604 GFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVF 663
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G + TF S + + SE A + QG+Q+HA + K G + V +++ISMY++C
Sbjct: 664 ARMNREGIDSNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKC 723
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + D+ K FLE + V W++MI AY HG G EA++ F+QM N VT V +L
Sbjct: 724 GSISDAKKQFLELSMKNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVL 783
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL +KG+E+F+ M +Y P+ EHY CVVD+L R G L A I MP++ +
Sbjct: 784 SACSHIGLVDKGIEYFESMNTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIEPD 843
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A++W+TLLSAC HK+ ++ A +L + P+D+A YVLLSN++A ++W R+
Sbjct: 844 ALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVCRKWDARDLTRQK 903
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+E+ VKKEPG SW+E+KN +H F +GD++HP + EI Y ++LT GYV D +
Sbjct: 904 MKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFKDLTKRASEIGYVQDCFSL 963
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP----------------FKYISEIK 404
+ ++ E+K+ + HSEKLAI+F L +P K++S++
Sbjct: 964 LSELQQEQKDPTIFIHSEKLAISFG--LLSLPATMPINVMKNLRVCNDCHDWIKFVSKVS 1021
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
NREIIVRDA RFHHF G CSC DYW
Sbjct: 1022 NREIIVRDAYRFHHFEGGACSCKDYW 1047
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 132/262 (50%), Gaps = 6/262 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D ++L +Y GSL+ E + M R+ + + TLI G +Q G E ++ +
Sbjct: 301 GFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELF 360
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M++ G PD T S++ +CS TL GQQ+HA K G + + + +L+++Y++C
Sbjct: 361 KRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKC 420
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
++ ++ FLE E +VVLW+ M+ AYG + +F QM+ +E N T+ S+L
Sbjct: 421 SDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSIL 480
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC--VVDLLGRCGYLDEAAALIRNMPVK 238
C G E G + ++K +L Y C ++D+ + G LD A ++ K
Sbjct: 481 KTCIRLGDLELGEQIHSQIIKT---SFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK 537
Query: 239 ANAIIWKTLLSACKTHKSTDMA 260
+ + W T+++ + D A
Sbjct: 538 -DVVSWTTMIAGYTQYNFDDKA 558
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 131/253 (51%), Gaps = 2/253 (0%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F+L+ S L MY K G L ++ ++V++W T+IAG Q + L +
Sbjct: 504 FQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFR 563
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M G R D++ + +S+C+ L L +GQQIHA+ +G S D+ ++L+++YS+CG
Sbjct: 564 QMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCG 623
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
++++ F + E D + W+++++ + G EEA+ +F +M ++ ++N+ TF S +
Sbjct: 624 NIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVK 683
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
A S ++G + ++ K E ++ + +CG + +A + +K N
Sbjct: 684 AASETANMKQGKQ-VHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMK-NE 741
Query: 242 IIWKTLLSACKTH 254
+ W +++A H
Sbjct: 742 VSWNAMINAYSKH 754
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 121/245 (49%), Gaps = 4/245 (1%)
Query: 7 VAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV 66
+ + L +Y ++G + +V + +++ +W+ +I+G ++N + + + M ++
Sbjct: 206 IVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMYVL 265
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
G P F SV+S+C ++ +L G+Q+H V+K G S D V ++L+S+Y G L +
Sbjct: 266 GIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISA 325
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHC 186
F D V ++++I G GE+A+ LF++M+ E + T SL+ ACS
Sbjct: 326 EHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSD 385
Query: 187 GLKEKGMEFFDLMVK-KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
G G + K + ++E +++L +C ++ A V+ N ++W
Sbjct: 386 GTLFSGQQLHAYTTKLGFASNDKIE--GALLNLYAKCSDIETALNYFLETEVE-NVVLWN 442
Query: 246 TLLSA 250
+L A
Sbjct: 443 VMLVA 447
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 117/257 (45%), Gaps = 10/257 (3%)
Query: 11 SLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR- 69
+L ++Y K + + NV+ W ++ GL +D+ + + + R +
Sbjct: 412 ALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAY---GLLDDLRNSFRIFRQMQIEE 468
Query: 70 --PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV 127
P++ T+ S++ +C L L G+QIH++++K L+ V S LI MY++ G LD +
Sbjct: 469 IVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAW 528
Query: 128 KTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHC- 186
+ DVV W++MIA Y + ++A+ F QM + +++V + + AC+
Sbjct: 529 DILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQ 588
Query: 187 GLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKT 246
LKE V + L +V L +CG ++EA N I W
Sbjct: 589 ALKEGQQIHAQACVSGFSSD--LPFQNALVTLYSKCGNIEEAYLAFEQTEAGDN-IAWNA 645
Query: 247 LLSACKTHKSTDMAGRI 263
L+S + + + A R+
Sbjct: 646 LVSGFQQSGNNEEALRV 662
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 102/253 (40%), Gaps = 7/253 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ + L Y+ G L KV MP R + W +I A L+ V +
Sbjct: 98 GFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLF 157
Query: 61 NLMRMVGFRPDKITFVSVISSC-SELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
M P++ TF V+ +C +QIHA ++ G V + LI +YSR
Sbjct: 158 GRMVNENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSR 217
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G +D + + F D W +MI+ + EAI LF M F S+
Sbjct: 218 NGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSV 277
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC--VVDLLGRCGYLDEAAALIRNMPV 237
L AC E G + L++K + Y C +V L G L A + NM
Sbjct: 278 LSACKKIESLEIGEQLHGLVLKLGFSS---DTYVCNALVSLYFHLGSLISAEHIFSNMSQ 334
Query: 238 KANAIIWKTLLSA 250
+ +A+ + TL++
Sbjct: 335 R-DAVTYNTLING 346
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 102/232 (43%), Gaps = 19/232 (8%)
Query: 67 GFRPDKITFVSVISSCSEL-ATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD 125
G RP+ T ++ C + +L +G+++H++++K G + + L+ Y G LD
Sbjct: 62 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDG 121
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
++K F E + W+ MI + LF +M + N+ TF +L AC
Sbjct: 122 ALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEAC-- 179
Query: 186 CGLKEKGMEFFDLMVKKYRR--KPRLEHYTCV----VDLLGRCGYLDEAAALIRNMPVKA 239
G FD++ + + R L T V +DL R G++D A + + +K
Sbjct: 180 ----RGGSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKD 235
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEE--ILGVNPQDAAPYVLLSNIHASAK 289
++ W ++S ++ A R+ + +LG+ P PY S + A K
Sbjct: 236 HS-SWVAMISGLSKNECEVEAIRLFCDMYVLGIMP---TPYAFSSVLSACKK 283
>gi|357501931|ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355496269|gb|AES77472.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 700
Score = 353 bits (907), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 178/450 (39%), Positives = 266/450 (59%), Gaps = 26/450 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D+ GS L M+ K G ++ KV + RNV+ W +L+ QNG E+ L+
Sbjct: 257 GLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQNGEFEETLNLL 316
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M G ++ TF ++++ + +A L G +HA V K G V V ++LI+MYS+C
Sbjct: 317 SCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHARVEKLGIKNRVIVGNALINMYSKC 376
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
GC+D S F + D++ W++MI Y HG G++A+ LF+ M N VTFV +L
Sbjct: 377 GCIDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQALLLFQDMLSAGECPNHVTFVGVL 436
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+H L +G + + ++K ++ +P LEHYTCVV +L R G L+EA +R VK +
Sbjct: 437 SACAHLALVNEGFYYLNQLMKHFKVEPGLEHYTCVVAVLCRAGMLEEAENFMRTTQVKWD 496
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+ W+ LL+AC H++ ++ +IAE IL ++P+D Y LLSN++A A+ W V+ R+
Sbjct: 497 VVAWRVLLNACNIHRNYNLGTKIAETILQMDPRDMGTYTLLSNMYAKARSWDSVTMIRKM 556
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
MRERNVKKEPGVSW+EI+N VH F+ +HP ++I ++ L +K GYVP+ A
Sbjct: 557 MRERNVKKEPGVSWIEIRNAVHVFSSDGSNHPECIQIYNKVQLLLEMIKQLGYVPNIEAV 616
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP--------------------FKYI 400
+HD++ E+KE L +HSEKLAIA+ ++ +P K I
Sbjct: 617 LHDVEDEQKESYLNYHSEKLAIAYG------LMKIPSPAPIRVIKNLRICEDCHTAVKLI 670
Query: 401 SEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
S++ NR IIVRDASRFHHFR+G C+C D+W
Sbjct: 671 SKVTNRLIIVRDASRFHHFRDGTCTCTDHW 700
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 128/255 (50%), Gaps = 8/255 (3%)
Query: 62 LMRMV--GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
L RMV G D +T+VSV+ C ++ LG G Q+HA+++K G + DV V S L+ M+ +
Sbjct: 215 LGRMVDEGVVWDSVTYVSVMGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGK 274
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG + + K F + +VV+W+S++ AY +G+ EE +NL M+++ +N+ TF L
Sbjct: 275 CGDVLSARKVFDGLQNRNVVVWTSLMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVL 334
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L A + G + V+K K R+ ++++ +CG +D + + +M +
Sbjct: 335 LNAFAGMAALRHG-DLLHARVEKLGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMRNR- 392
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEF 297
+ I W ++ H A + +++L G P +LS A +G
Sbjct: 393 DIITWNAMICGYSQHGLGKQALLLFQDMLSAGECPNHVTFVGVLSACAHLALVNEGFYYL 452
Query: 298 REAMRERNVKKEPGV 312
+ M ++ K EPG+
Sbjct: 453 NQLM--KHFKVEPGL 465
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 130/265 (49%), Gaps = 31/265 (11%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E +++ +SL ++Y+K L + M +R+V+++ L+ G +G +V+ +
Sbjct: 52 EFNIIQLNSLINLYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKN 111
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M ++P++ F +V+S+C+ + +G Q H + K G V SSL+ MYS+C
Sbjct: 112 MVSSLYQPNEYVFTTVLSACAHSGRVFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFH 171
Query: 123 LDDSVKTFLECEY------SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
+D +++ LE E+ +D ++S++ A G+ EA+ + +M + + VT+
Sbjct: 172 VDLALQV-LESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTY 230
Query: 177 VSLLYACS-----------HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYL 225
VS++ C H L + G+ FD+ V + +VD+ G+CG +
Sbjct: 231 VSVMGLCGQIRDLGLGLQVHAQLLKGGLT-FDVFVG-----------SMLVDMFGKCGDV 278
Query: 226 DEAAALIRNMPVKANAIIWKTLLSA 250
A + + + N ++W +L++A
Sbjct: 279 LSARKVFDGLQNR-NVVVWTSLMTA 302
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 353 bits (907), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 182/446 (40%), Positives = 272/446 (60%), Gaps = 26/446 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+V G+++ MY K G L KV ++P+++VI+W TLI G AQNGLA + ++ Y +M
Sbjct: 452 DVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMME 511
Query: 65 MVG-FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
P++ T+VS++ + + + L QG +IH V+K LDV V + LI +Y +CG L
Sbjct: 512 ECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRL 571
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
D++ F + V W+++I+ +G HG E+ + LF +M + + + VTFVSLL AC
Sbjct: 572 VDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSAC 631
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
SH G E+G F LM ++Y KP L+HY C+VDLLGR GYL+ A I++MP++ +A I
Sbjct: 632 SHSGFVEEGKWCFRLM-QEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASI 690
Query: 244 WKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
W LL AC+ H + ++ ++ + V+ ++ YVLLSNI+A+ +W+GV + R RE
Sbjct: 691 WGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARE 750
Query: 304 RNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHD 363
R +KK PG S +E+ +V F G++SHP+ EI L LT++MK GY+PD + D
Sbjct: 751 RGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQD 810
Query: 364 MDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIK 404
++ +EKE+ L HSE+LAIAF G+I P K+IS I
Sbjct: 811 VEEDEKEHILTSHSERLAIAF-----GIISTPPKSPIRIFKNLRVCGDCHNATKFISRIT 865
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
REI+VRD++RFHHF++G CSCGDYW
Sbjct: 866 QREIVVRDSNRFHHFKDGICSCGDYW 891
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 128/250 (51%), Gaps = 1/250 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ ++ +SL HMY + G + MP R++ +W +I+G QNG A LD
Sbjct: 245 GFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVL 304
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ MR+ G + + +T VS++ C +L + IH V+K G D+ V ++LI+MY++
Sbjct: 305 DEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKF 364
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L+D+ K F + +DVV W+S+IAAY + A F +M+ F+ + +T VSL
Sbjct: 365 GNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLA 424
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
+ + ++++ + VVD+ + G LD A + +PVK +
Sbjct: 425 SIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVK-D 483
Query: 241 AIIWKTLLSA 250
I W TL++
Sbjct: 484 VISWNTLITG 493
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 117/242 (48%), Gaps = 6/242 (2%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNG-LAEDVLDQYNLMRMVGF 68
+ L ++Y G + +P ++V AW ++I+ NG E + Y L+ +
Sbjct: 155 TRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEI 214
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
RPD TF V+ +C TL G++IH K G +V V +SLI MYSR G +
Sbjct: 215 RPDFYTFPPVLKAC---GTLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARS 271
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F + + D+ W++MI+ +G +A+++ ++M + + N VT VS+L C G
Sbjct: 272 LFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGD 331
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
M L V K+ + L ++++ + G L++A + M + + + W +++
Sbjct: 332 ISTAM-LIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFI-TDVVSWNSII 389
Query: 249 SA 250
+A
Sbjct: 390 AA 391
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 80/180 (44%), Gaps = 3/180 (1%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
LD+ + L +Y K G LV+ + +P + + W +I+ +G AE L +
Sbjct: 551 LHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFG 610
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M G +PD +TFVS++S+CS + +G+ + + G + ++ + R G
Sbjct: 611 EMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAG 670
Query: 122 CLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
L+ + + D +W +++ A HG E + F E ++ +V + LL
Sbjct: 671 YLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIE--LGKFASDRLFEVDSKNVGYYVLL 728
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 106/257 (41%), Gaps = 44/257 (17%)
Query: 41 ITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQ------- 93
+TL + + ++ LA + +Y + + R I S S + ++ G G Q
Sbjct: 65 LTLASARWRHILAPTLKSRYT-SKFLPPRRRPIQLFSAARSSPQFSSYGLGNQNEEIDFN 123
Query: 94 --------------IHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVV 139
+HA +V AG + + + L+++Y+ G + S TF + DV
Sbjct: 124 FLFDSSTKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVY 183
Query: 140 LWSSMIAAYGFHGKGEEAINLFEQMEQ-KEFEANDVTFVSLLYACS--------HCGLKE 190
W+SMI+AY +G EAI F Q+ E + TF +L AC HC +
Sbjct: 184 AWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRKIHCWAFK 243
Query: 191 KGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
G + +++ V ++ + R G+ A +L +MP + + W ++S
Sbjct: 244 LGFQ-WNVFVA-----------ASLIHMYSRFGFTGIARSLFDDMPFR-DMGSWNAMISG 290
Query: 251 CKTHKSTDMAGRIAEEI 267
+ + A + +E+
Sbjct: 291 LIQNGNAAQALDVLDEM 307
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 353 bits (907), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 181/444 (40%), Positives = 265/444 (59%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ DL G++L +Y + G + E + ++ I+W LI+G AQ+G ED L +
Sbjct: 546 GYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVF 605
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M TF S +S+ + +A + QG+QIHA ++K G D+ V ++LI+ Y++C
Sbjct: 606 AQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSNALITFYAKC 665
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++D+ + F E + V W++MI Y HG G EA+NLFE+M+Q N VTFV +L
Sbjct: 666 GSIEDARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVL 725
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL KG+ +F+ M K++ P+ HY CVVDL+ R G+L A I MP++ +
Sbjct: 726 SACSHVGLVTKGLGYFESMSKEHGLVPKPAHYACVVDLISRAGFLSRARKFIEEMPIEPD 785
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A IW+TLLSAC HK+ ++ A+ +L + P+D+A YVLLSN++A + +W + R+
Sbjct: 786 ATIWRTLLSACTVHKNVEVGEFAAQHLLELEPEDSATYVLLSNMYAVSGKWDCRDQTRQM 845
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
MR R VKKEPG SW+E+KN VH F +GD+ HP + +I +L EL + GY D +
Sbjct: 846 MRNRGVKKEPGRSWIEVKNSVHAFYVGDRLHPLADKIYEFLAELNKKAAEIGYFQDRYSL 905
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA----EHTRGLIVMLPF----------KYISEIKNR 406
++D++ E+K+ + HSEKLAI F T + VM K++S+I NR
Sbjct: 906 LNDVEQEQKDPTVYIHSEKLAITFGLLSLSDTVPIHVMKNLRVCKDCHSWIKFVSKISNR 965
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
IIVRDA RFHHF G CSC DYW
Sbjct: 966 AIIVRDAYRFHHFEGGICSCKDYW 989
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 157/313 (50%), Gaps = 4/313 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ ++ S L MY K G L ++R + +V++W LI+G AQ+ L + L +
Sbjct: 445 GFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHF 504
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G + D I F S IS+C+ + L QG+QIHA+ +G S D+ + ++L+S+Y+RC
Sbjct: 505 KEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARC 564
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + ++ F + + D + W+ +I+ + G E+A+ +F QM + + EA+ TF S +
Sbjct: 565 GRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAV 624
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
A ++ ++G + +++K+ +E ++ +CG +++A MP K N
Sbjct: 625 SAAANIANIKQGKQIHAMIIKR-GFDSDIEVSNALITFYAKCGSIEDARREFCEMPEK-N 682
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
+ W +++ H + A + E++ +G P +LS +G+ F
Sbjct: 683 DVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGLGYFE 742
Query: 299 EAMRERNVKKEPG 311
+E + +P
Sbjct: 743 SMSKEHGLVPKPA 755
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 134/257 (52%), Gaps = 6/257 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G L+ ++L +Y + + V EKV M ++ +++ +LI+G AQ G ++ L+ +
Sbjct: 243 GSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELF 302
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ +PD +T S++S+C+ L +G+Q+H+ V+KAG S D+ V +L+ +Y C
Sbjct: 303 TKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNC 362
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
+ + + FL + +VVLW+ M+ A+G E+ +F QM+ K N T+ S+L
Sbjct: 363 SDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSIL 422
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC--VVDLLGRCGYLDEAAALIRNMPVK 238
C+ G + G + ++K + Y C ++D+ + G LD A ++R + +
Sbjct: 423 RTCTSVGALDLGEQIHTQVIKT---GFQFNVYVCSVLIDMYAKHGKLDTAHVILRTL-TE 478
Query: 239 ANAIIWKTLLSACKTHK 255
+ + W L+S H
Sbjct: 479 DDVVSWTALISGYAQHN 495
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 123/244 (50%), Gaps = 2/244 (0%)
Query: 7 VAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV 66
+ + L +Y K+G ++ KV + ++ ++W+ +I+G +QNG E+ + + M
Sbjct: 148 IISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTA 207
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
G P F SV+S C+++ G+Q+HA V K G+SL+ V ++L+++YSR +
Sbjct: 208 GIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSA 267
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHC 186
K F + + D V ++S+I+ G + A+ LF +M++ + + VT SLL AC+
Sbjct: 268 EKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASN 327
Query: 187 GLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKT 246
G KG + ++K + ++DL C + A + + N ++W
Sbjct: 328 GALCKGEQLHSYVIKAGISSDMIVE-GALLDLYVNCSDIKTAHEMFLTAQTE-NVVLWNV 385
Query: 247 LLSA 250
+L A
Sbjct: 386 MLVA 389
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 120/252 (47%), Gaps = 6/252 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAW-ITLIAGKAQNGLAEDVLDQ 59
G D++ +L +Y+ + ++ NV+ W + L+A + L+E
Sbjct: 344 GISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSES-FRI 402
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ M++ G P++ T+ S++ +C+ + L G+QIH +V+K G +V V S LI MY++
Sbjct: 403 FRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAK 462
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G LD + DVV W+++I+ Y H EA+ F++M + +++++ F S
Sbjct: 463 HGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSA 522
Query: 180 LYACSHCGLKEKGMEFF-DLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+ AC+ +G + V Y L +V L RCG + EA + K
Sbjct: 523 ISACAGIQALNQGRQIHAQSYVSGYSED--LSIGNALVSLYARCGRIKEAYLEFEKIDAK 580
Query: 239 ANAIIWKTLLSA 250
++I W L+S
Sbjct: 581 -DSISWNGLISG 591
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 120/263 (45%), Gaps = 7/263 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF + V + L +Y G L KV MP R+V +W +I+G + ++ VLD +
Sbjct: 40 GFGNESVLCNKLVDVYFALGDLDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLF 99
Query: 61 NLMRMVGFRPDKITFVSVISSCS-ELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ M P +I+F SV+ +CS + +QIHA ++ G + + LI +Y++
Sbjct: 100 SCMIEENVSPTEISFASVLRACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAK 159
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G + + K F D V W +MI+ + +G EEAI+LF +M F S+
Sbjct: 160 NGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSV 219
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC--VVDLLGRCGYLDEAAALIRNMPV 237
L C+ L + G + L+ ++ LE Y C +V L R A + M
Sbjct: 220 LSGCTKIKLFDVGEQLHALV---FKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQS 276
Query: 238 KANAIIWKTLLSACKTHKSTDMA 260
K + + + +L+S +D A
Sbjct: 277 K-DEVSFNSLISGLAQQGFSDGA 298
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 55/111 (49%)
Query: 74 TFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLEC 133
T++ ++ C +L + +++H +++K G + + + L+ +Y G LD VK F +
Sbjct: 12 TYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDM 71
Query: 134 EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
V W +I+ + ++LF M ++ +++F S+L ACS
Sbjct: 72 PNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACS 122
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 353 bits (907), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 178/441 (40%), Positives = 261/441 (59%), Gaps = 14/441 (3%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
+DL G++L H Y K G++ ++V M RNV W +I G AQ+G D + M
Sbjct: 657 VDLRVGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQM 716
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
G PD T+VS++S+C+ L +++H V AG D+ V ++L+ MY++CG +
Sbjct: 717 LREGIVPDATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSI 776
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
DD+ F + DV W+ MI HG+G EA++ F +M+ + F+ N ++V++L AC
Sbjct: 777 DDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTAC 836
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
SH GL ++G F M + Y +P +EHYTC+VDLLGR G L+EA I NMP++ +
Sbjct: 837 SHAGLVDEGRRQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAP 896
Query: 244 WKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
W LL AC T+ + +MA A+E L + P+ A+ YVLLSNI+A+ +W+ R M+
Sbjct: 897 WGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGKWEQKLLVRSMMQR 956
Query: 304 RNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHD 363
+ ++KEPG SW+E+ N++H F +GD SHP S EI L +L +K +GYVPDT + +
Sbjct: 957 KGIRKEPGRSWIEVDNRIHSFVVGDTSHPESKEIYAQLNDLIERLKAKGYVPDTRLVLRN 1016
Query: 364 MDSEEKEYNLKHHSEKLAIAFA-EHTRGLIVMLPF-------------KYISEIKNREII 409
D E KE L HSEKLAI + HT+ + + K+IS+I REI+
Sbjct: 1017 TDQEHKEQALCSHSEKLAIVYGLMHTQSKDPIRVYKNLRVCSDCHTATKFISKITGREIV 1076
Query: 410 VRDASRFHHFRNGKCSCGDYW 430
RDA RFHHF++G CSCGDYW
Sbjct: 1077 ARDAKRFHHFKDGVCSCGDYW 1097
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 112/190 (58%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E +L + L +Y++ G L +V + +N+ W T+I G A+ G AED + Y
Sbjct: 148 GMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVY 207
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ MR +P++IT++S++ +C L G++IHA ++++G DV V ++L++MY +C
Sbjct: 208 DKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKC 267
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++D+ F + +V+ W+ MI +G+G+EA +LF QM+++ F N T+VS+L
Sbjct: 268 GSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSIL 327
Query: 181 YACSHCGLKE 190
A + G E
Sbjct: 328 NANASAGALE 337
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 154/303 (50%), Gaps = 13/303 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ D+ ++L +MY+K GS+ + + + M RNVI+W +I G A G ++ +
Sbjct: 249 GFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLF 308
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ GF P+ T+VS++++ + L +++H+ V AG +LD+ V ++L+ MY++
Sbjct: 309 LQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKS 368
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +DD+ F D+ W+ MI HG+G+EA +LF QM++ N T++S+L
Sbjct: 369 GSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSIL 428
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRK---PRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
A + +E+ ++ K L ++ + +CG +D+A + M
Sbjct: 429 NASAIA--STSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCD 486
Query: 238 KANAIIWKTLLSACKT----HKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQG 293
+ + I W ++ H++ + ++ +E G+ P D+ Y+ L N H S +
Sbjct: 487 R-DVISWNAMMGGLAQNGCGHEAFTVFLQMQQE--GLVP-DSTTYLSLLNTHGSTDALEW 542
Query: 294 VSE 296
V+E
Sbjct: 543 VNE 545
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 141/304 (46%), Gaps = 18/304 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF DL G++L HMY K GS+ + V M R+VI+W ++ G AQNG + +
Sbjct: 453 GFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVF 512
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G PD T++S++++ L ++H V+ G D V S+ I MY RC
Sbjct: 513 LQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRC 572
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +DD+ F + V W++MI G EA++LF QM+++ F + TF+++L
Sbjct: 573 GSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINIL 632
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPR------LEHYTCVVDLLGRCGYLDEAAALIRN 234
A + E+ +E+ VK+ L +V +CG + A + +
Sbjct: 633 SA----NVDEEALEW----VKEVHSHATDAGLVDLRVGNALVHTYSKCGNVKYAKQVFDD 684
Query: 235 MPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQ 292
M V+ N W ++ H A ++L G+ P DA YV + + AS +
Sbjct: 685 M-VERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVP-DATTYVSILSACASTGALE 742
Query: 293 GVSE 296
V E
Sbjct: 743 WVKE 746
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 129/248 (52%), Gaps = 9/248 (3%)
Query: 53 AEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISS 112
A+D + + G D ++V+++ C + + +Q+H ++K+G ++ V +
Sbjct: 99 AKDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANK 158
Query: 113 LISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEAN 172
L+ +Y RCG L + + F + ++ +W++MI Y +G E+A+ ++++M Q+ + N
Sbjct: 159 LLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPN 218
Query: 173 DVTFVSLLYACSHCGLKEK-GMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAA 230
++T++S+L AC C + K G + +++ ++ R+E T +V++ +CG +++A
Sbjct: 219 EITYLSILKACC-CPVNLKWGKKIHAHIIQSGFQSDVRVE--TALVNMYVKCGSIEDAQL 275
Query: 231 LIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASA 288
+ M V+ N I W ++ + A + ++ G P ++ YV + N +ASA
Sbjct: 276 IFDKM-VERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIP-NSYTYVSILNANASA 333
Query: 289 KRWQGVSE 296
+ V E
Sbjct: 334 GALEWVKE 341
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 102/209 (48%), Gaps = 5/209 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G DL G++L HMY K GS+ + V M R+V +W +I G AQ+G + LD +
Sbjct: 755 GLVSDLRVGNALVHMYAKCGSIDDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEALDFF 814
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQG-QQIHAEVVKAGASLDVGVISSLISMYSR 119
M+ GF+P+ ++V+V+++CS + +G +Q + G + + ++ + R
Sbjct: 815 VKMKSEGFKPNGYSYVAVLTACSHAGLVDEGRRQFLSMTQDYGIEPTMEHYTCMVDLLGR 874
Query: 120 CGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEA-INLFEQMEQKEFEANDVTFV 177
G L+++ L D W +++ A +G E A E+++ K A+ +
Sbjct: 875 AGLLEEAELFILNMPIEPDDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLL 934
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRK 206
S +YA + G E+ + +M +K RK
Sbjct: 935 SNIYAAT--GKWEQKLLVRSMMQRKGIRK 961
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 353 bits (906), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 175/443 (39%), Positives = 269/443 (60%), Gaps = 14/443 (3%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
+ +D+V+ +S+ + K G + K+ MP +N++ W T+I+G AQN + ++ +
Sbjct: 181 YYVDVVSWTSMIRGFNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFK 240
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
+++ G R ++ VSVISSC+ L L G++ H VVK G +L++ + ++L+ MY+RCG
Sbjct: 241 VLQSQGVRANETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCG 300
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+D +V F + D + W+++IA HG E ++ F M + D+TF ++L
Sbjct: 301 SIDKAVWVFEDLPERDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLS 360
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
ACSH GL E+G + F+ M + +R +PRLEHY C+VDLLGR G L+EA + MPVK NA
Sbjct: 361 ACSHGGLVERGFQIFESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNA 420
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
+W LL AC+ HK+ ++ R+ + ++ + PQ + YVLLSNI+A+AK W+ V+E R+ M
Sbjct: 421 PVWGALLGACRIHKNAEIGERVGKILIQLLPQHSGYYVLLSNIYANAKEWEKVTEMRQMM 480
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
+ + +KK PG S +E+ +VH+FT+GD SHP +I+ EE+ ++ GY +T +
Sbjct: 481 KAKGLKKPPGHSLIELDGRVHKFTIGDSSHPEMDKIERMWEEILMRIRAAGYRGNTADAL 540
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNRE 407
D+D EEKE L HSEKLAIAF G + + K IS++ RE
Sbjct: 541 FDIDEEEKESALHRHSEKLAIAFGMMRSEAGTPIRIVKNLRVCEDCHTATKLISKVFGRE 600
Query: 408 IIVRDASRFHHFRNGKCSCGDYW 430
+IVRD +RFHHFR G CSC DYW
Sbjct: 601 LIVRDRNRFHHFRQGLCSCMDYW 623
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 130/305 (42%), Gaps = 35/305 (11%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
N+ + +I G + + + Y + G PD +TF ++ SC++L + G Q H
Sbjct: 83 NLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGSQAH 142
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGE 155
++K G DV V +SL+ MY+ G + + F Y DVV W+SMI + G E
Sbjct: 143 GHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVE 202
Query: 156 EAINLFEQMEQKEF-------------------------------EANDVTFVSLLYACS 184
A LF+QM +K AN+ VS++ +C+
Sbjct: 203 SARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCA 262
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H G E G D +VK L T +VD+ RCG +D+A + ++P + + + W
Sbjct: 263 HLGALELGERAHDYVVKN-GMTLNLILGTALVDMYARCGSIDKAVWVFEDLPER-DTLSW 320
Query: 245 KTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMR 302
L++ H ++ + + ++ G+ P+D +LS +G F R
Sbjct: 321 TALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFESMKR 380
Query: 303 ERNVK 307
+ V+
Sbjct: 381 DHRVE 385
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 80/158 (50%), Gaps = 4/158 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G L+L+ G++L MY + GS+ + V +P R+ ++W LIAG A +G +E L +
Sbjct: 281 GMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTALIAGLAMHGYSERSLKYF 340
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV--ISSLISMYS 118
M G P ITF +V+S+CS + +G QI E +K ++ + ++ +
Sbjct: 341 ATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIF-ESMKRDHRVEPRLEHYGCMVDLLG 399
Query: 119 RCGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGE 155
R G L+++ + L+ + +W +++ A H E
Sbjct: 400 RAGKLEEAERFVLKMPVKPNAPVWGALLGACRIHKNAE 437
>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 997
Score = 353 bits (906), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 173/449 (38%), Positives = 276/449 (61%), Gaps = 24/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G++LDL S + MY+K G + + +P+ + +AW TLI+G +NG E L +
Sbjct: 554 GYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEEERALHVF 613
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ MR++G PD+ T ++ + S L L QG+QIHA +K + D V +SL+ MY++C
Sbjct: 614 SQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDPFVGTSLVDMYAKC 673
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +DD+ F E ++ W++M+ HG+G+EA+ LF+QME + + VTF+ +L
Sbjct: 674 GSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQMESLGIKPDKVTFIGVL 733
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL + ++ M + Y KP +EHY+C+ D LGR G + EA LI +M ++A+
Sbjct: 734 SACSHSGLVSEAYKYIRSMHRDYGIKPEIEHYSCLADALGRAGLVKEAENLIDSMSMEAS 793
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A +++TLL+AC+ T+ R+A ++L + P D++ YVLLSN++A+A +W + R
Sbjct: 794 ASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTM 853
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+ VKK+PG SW+E+KN++H F + D+S+P++ I ++++ ++K GYVP+T
Sbjct: 854 MKGHKVKKDPGFSWIEVKNKIHLFVVDDRSNPQTELIYKKVKDMIRDIKQEGYVPETDFT 913
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
+ D++ EEKE L +HSEKLA+AF GL+ P KYIS
Sbjct: 914 LVDVEEEEKERALYYHSEKLAVAF-----GLLSTPPSTPIRVIKNLRVCGDCHNAMKYIS 968
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
++ +REI++RDA+RFH F++G CSCGDYW
Sbjct: 969 KVYDREIVLRDANRFHRFKDGICSCGDYW 997
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 129/277 (46%), Gaps = 6/277 (2%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
+++AW +++G Q+ L+ + LM G R D T +V+ +C L + QG+Q+H
Sbjct: 488 DLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVH 547
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGE 155
A +K+G LD+ V S ++ MY +CG + + F D V W+++I+ +G+ E
Sbjct: 548 AYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEEE 607
Query: 156 EAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVK-KYRRKPRLEHYTC 214
A+++F QM ++ T +L A S E+G + +K P + T
Sbjct: 608 RALHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDPFVG--TS 665
Query: 215 VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNP 272
+VD+ +CG +D+A L + + + N W +L H A ++ +++ LG+ P
Sbjct: 666 LVDMYAKCGSIDDAYCLFKRIEM-MNITAWNAMLVGLAQHGEGKEALQLFKQMESLGIKP 724
Query: 273 QDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKE 309
+LS S + R R+ +K E
Sbjct: 725 DKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYGIKPE 761
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 131/277 (47%), Gaps = 6/277 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +L L +SL +MY K + V M R++I+W ++IAG AQ+ L + + +
Sbjct: 352 GLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLF 411
Query: 61 NLMRMVGFRPDKITFVSVISSCSELAT-LGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ G +PD T SV+ + S L L +QIH +K D V ++LI YSR
Sbjct: 412 MQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSR 471
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
C+ ++ F + D+V W++M++ Y G + + LF M ++ ++D T ++
Sbjct: 472 NRCMKEAEVLFGRNNF-DLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATV 530
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L C +G + +K L + ++D+ +CG + A ++PV
Sbjct: 531 LKTCGFLFAINQGKQVHAYAIKS-GYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPV-P 588
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEE--ILGVNPQD 274
+ + W TL+S C + + A + + ++GV P +
Sbjct: 589 DDVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDE 625
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 86/174 (49%), Gaps = 9/174 (5%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQN--GLAEDVLDQYNLMRMVG 67
++L MY K GSL +V MP R++++W +++A AQ+ G+ E+V + + L R++
Sbjct: 85 NNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAYAQSSEGVVENVKEAFLLFRIL- 143
Query: 68 FRPD-----KITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
R D ++T ++ C + + H K G D V +L+++Y + G
Sbjct: 144 -RQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACKIGLDGDDFVAGALVNIYLKFGK 202
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
+ + F E Y DVVLW+ M+ AY G EEAI+L N++T
Sbjct: 203 VKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHTSGLHPNEITL 256
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 73/151 (48%)
Query: 34 IRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQ 93
+ +I+ +++G G +L + M D++TF+ V+++ L +L GQQ
Sbjct: 284 VSEIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQ 343
Query: 94 IHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGK 153
+H +K G L + V +SLI+MY + + + F D++ W+S+IA
Sbjct: 344 VHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDL 403
Query: 154 GEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
EA+ LF Q+ + + + T S+L A S
Sbjct: 404 EVEAVCLFMQLLRCGLKPDHYTMTSVLKAAS 434
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 15/169 (8%)
Query: 91 GQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGF 150
G+ HA ++ + + ++++LISMYS+CG L + + F + D+V W+S++AAY
Sbjct: 65 GKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAYAQ 124
Query: 151 HGKG-----EEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRR 205
+G +EA LF + Q + +T +L C H G F Y
Sbjct: 125 SSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESF-----HGYAC 179
Query: 206 KPRLEHYTCV----VDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
K L+ V V++ + G + E L MP + + ++W +L A
Sbjct: 180 KIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYR-DVVLWNLMLKA 227
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 9/143 (6%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D VAG+ L ++Y+K G + EG + MP R+V+ W ++ + G E+ +D +
Sbjct: 187 DFVAGA-LVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFH 245
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG--- 121
G P++IT + + + GQ + A A ++ + ++S Y G
Sbjct: 246 TSGLHPNEITLRLLSRISGDDSEAGQVKSFE-NGNDASAVSEIISRNKILSGYLHAGQYS 304
Query: 122 ----CLDDSVKTFLECEYSDVVL 140
C D V++ LEC+ +L
Sbjct: 305 ALLKCFMDMVESDLECDQVTFIL 327
>gi|15226158|ref|NP_180932.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101013|sp|P93011.1|PP182_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33760
gi|1707020|gb|AAC69141.1| hypothetical protein [Arabidopsis thaliana]
gi|330253787|gb|AEC08881.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 583
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 176/447 (39%), Positives = 272/447 (60%), Gaps = 17/447 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF LD ++L Y K G + +V MP ++++AW +L++G QNGLA++ + +
Sbjct: 137 GFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVF 196
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
MR GF PD TFVS++S+C++ + G +H ++ G L+V + ++LI++YSRC
Sbjct: 197 YQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRC 256
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFE-ANDVTFVSL 179
G + + + F + + ++V W++MI+AYG HG G++A+ LF +ME N+VTFV++
Sbjct: 257 GDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAV 316
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L AC+H GL E+G + M K YR P +EH+ C+VD+LGR G+LDEA I +
Sbjct: 317 LSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATG 376
Query: 240 NAI---IWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSE 296
A +W +L ACK H++ D+ IA+ ++ + P + +V+LSNI+A + + VS
Sbjct: 377 KATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSH 436
Query: 297 FREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPD 356
R+ M N++K+ G S +E++N+ + F+MGD+SH + EI YLE L S K GY P
Sbjct: 437 IRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISRCKEIGYAPV 496
Query: 357 TGADMHDMDSEEKEYNLKHHSEKLAIAFA-EHTRGLIVML------------PFKYISEI 403
+ MH ++ EEKE+ L++HSEKLA+AF T + + + FKYIS +
Sbjct: 497 SEEVMHQVEEEEKEFALRYHSEKLAVAFGLLKTVDVAITIVKNLRICEDCHSAFKYISIV 556
Query: 404 KNREIIVRDASRFHHFRNGKCSCGDYW 430
NR+I VRD RFHHF+NG CSC DYW
Sbjct: 557 SNRQITVRDKLRFHHFQNGSCSCLDYW 583
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 120/254 (47%), Gaps = 22/254 (8%)
Query: 32 MPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQG 91
+P+ + + ++I ++ L + Y M P TF SVI SC++L+ L G
Sbjct: 67 VPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIG 126
Query: 92 QQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFH 151
+ +H V +G LD V ++L++ YS+CG ++ + + F +V W+S+++ + +
Sbjct: 127 KGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQN 186
Query: 152 GKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKG--------MEFFDLMVKKY 203
G +EAI +F QM + FE + TFVSLL AC+ G G E DL VK
Sbjct: 187 GLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKL- 245
Query: 204 RRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRI 263
T +++L RCG + +A + M + N W ++SA TH G+
Sbjct: 246 --------GTALINLYSRCGDVGKAREVFDKMK-ETNVAAWTAMISAYGTHGY----GQQ 292
Query: 264 AEEILGVNPQDAAP 277
A E+ D P
Sbjct: 293 AVELFNKMEDDCGP 306
>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 609
Score = 353 bits (905), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 182/444 (40%), Positives = 265/444 (59%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ +SL HMY G +V +M R+ +AW ++I G A NG+ + L Y
Sbjct: 166 GFDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLY 225
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G PD T VS++S+C EL L G+++H +VK G + ++L+ +YS+C
Sbjct: 226 REMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKC 285
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G D+ K F E E VV W+S+I +G G EA+ LF ++E++ + +++TFV +L
Sbjct: 286 GNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVL 345
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
YACSHCG+ ++G +F M ++Y PR+EH+ C+VDLL R G + +A IRNMPV N
Sbjct: 346 YACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPN 405
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A+IW+TLL AC H ++ EI + + + +VLLSN++AS +RW V R+
Sbjct: 406 AVIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASERRWLDVQNVRKI 465
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M + VKK PG S +E+KN+V++F MGD+SHP+S E L ++T +K+ GYVP T
Sbjct: 466 MLMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQLLKIEGYVPRTVNV 525
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAF----AEHTRGLIVM----------LPFKYISEIKNR 406
+ D++ EEKE L HH+EK+AIAF + +M L K IS++ R
Sbjct: 526 LADIEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRVCADCHLAIKLISKVFER 585
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EIIVRD SRFHHF++G CSC DYW
Sbjct: 586 EIIVRDRSRFHHFKDGSCSCKDYW 609
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 3/214 (1%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVG-FRPDKITFVSVISSCSELATLGQGQQI 94
N+ W T+I G A++ ++ ++ M PD TF + + ++L + G+ I
Sbjct: 99 NIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGI 158
Query: 95 HAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKG 154
H+ VV+ G V +SL+ MYS G + + + F Y D V W+S+I + +G
Sbjct: 159 HSVVVRNGFDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNSVINGFALNGMP 218
Query: 155 EEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC 214
EA+ L+ +M + E + T VSLL AC G G MVK + +
Sbjct: 219 NEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQ-HASNA 277
Query: 215 VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
++DL +CG +A + M ++ + W +L+
Sbjct: 278 LLDLYSKCGNFRDAQKVFDEMEERS-VVSWTSLI 310
>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 353 bits (905), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 185/450 (41%), Positives = 275/450 (61%), Gaps = 26/450 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E +L ++L +MY K GSL +KV L+ I++V++W TLI G AQNGLA + ++ Y
Sbjct: 125 GLEFELFVSNALINMYAKFGSLGHAQKVFGLL-IKDVVSWNTLITGYAQNGLASEAIEVY 183
Query: 61 NLMR-MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
LM P++ T+VS++ + S + L QG +IH +V+K DV V + LI MY +
Sbjct: 184 LLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGK 243
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG LDD++ F + + V W++MI+ YG HG GE+A+ LF +M+ + + + +TFVSL
Sbjct: 244 CGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHITFVSL 303
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L ACSH GL F++M ++Y KP L+HY C+VDL GR G L+ A I+ MP++
Sbjct: 304 LSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIKKMPIQP 363
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
+A W LL+AC+ H + ++ +E + V+ ++ YVLLSNI+A+ +W+GV + R
Sbjct: 364 DASAWGALLNACRIHGNIELGKHASERLFEVDSENVGYYVLLSNIYANVGKWEGVDDVRS 423
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
R+R ++K PG S + + N+V F G+++HP+ EI L +LTS++K GYVPD
Sbjct: 424 LARDRGLRKNPGWSSIILNNKVDVFYTGNQTHPKCEEIYRELRDLTSKIKTIGYVPDFCF 483
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYI 400
+ D++ +EKE+ L HSE+LAIA+ G+I P K+I
Sbjct: 484 VLQDVEEDEKEHILMGHSERLAIAY-----GIISTSPKTPIRIFKNLRVCGDCHTVTKFI 538
Query: 401 SEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
S I REIIVRD+SRFHHF+ G CSCGDYW
Sbjct: 539 SIITEREIIVRDSSRFHHFKGGTCSCGDYW 568
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/268 (33%), Positives = 147/268 (54%), Gaps = 4/268 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE D+ +SL HMY + G + + K+ MP R+ +W +I+G QNG A + LD
Sbjct: 24 GFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDRGSWNAMISGYCQNGNAAEALDIA 83
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ MR+ G + D IT SV+ C+++ + G+ IH V+K G ++ V ++LI+MY++
Sbjct: 84 DEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHGLEFELFVSNALINMYAKF 143
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQ-KEFEANDVTFVSL 179
G L + K F DVV W+++I Y +G EAI ++ ME+ +E N T+VS+
Sbjct: 144 GSLGHAQKVF-GLLIKDVVSWNTLITGYAQNGLASEAIEVYLLMEEHEEIIPNQGTWVSI 202
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L A SH G ++GM ++K TC++D+ G+CG LD+A +L +P K
Sbjct: 203 LPAYSHVGALQQGMRIHGQVIKNCLYSDVFVG-TCLIDMYGKCGKLDDAISLFYQVPRK- 260
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEI 267
N++ W ++S H + A + E+
Sbjct: 261 NSVPWNAMISCYGVHGDGEKALELFREM 288
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 89/173 (51%), Gaps = 6/173 (3%)
Query: 78 VISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSD 137
V+ +C +L G++IH V+K G DV V +SL+ MYSR G + D+ K F + D
Sbjct: 3 VVKACGDLL---DGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARD 59
Query: 138 VVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFD 197
W++MI+ Y +G EA+++ ++M + + + +T S+L C+ G G +
Sbjct: 60 RGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSG-KLIH 118
Query: 198 LMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
L V K+ + L ++++ + G L A + + +K + + W TL++
Sbjct: 119 LYVIKHGLEFELFVSNALINMYAKFGSLGHAQKVF-GLLIK-DVVSWNTLITG 169
>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
Length = 808
Score = 353 bits (905), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 166/445 (37%), Positives = 269/445 (60%), Gaps = 24/445 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+V+ +++ Y+ SG L + +V ++MP +N ++W+ +++G GL+ED L +N MR
Sbjct: 369 DVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMR 428
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+P T+ I++C EL L G+Q+HA +V+ G ++L++MY++CG ++
Sbjct: 429 AEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVN 488
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D+ FL D V W++MI+A G HG G EA+ LF+QM + + + ++F+++L AC+
Sbjct: 489 DARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACN 548
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL ++G +F+ M + + P +HY ++DLLGR G + EA LI+ MP + IW
Sbjct: 549 HAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIW 608
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
+ +LS C+T+ + A+++ + PQ Y+LLSN +++A RW + R+ MR+R
Sbjct: 609 EAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDR 668
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
VKKEPG SW+E+ +++H F +GD HP + E+ +LE + + M+ GYVPDT +HDM
Sbjct: 669 GVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGARMRKLGYVPDTKFVLHDM 728
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPFKYISEIKN------------------- 405
+ EKEY L HSEKLA+ F GL+ + P ++ +KN
Sbjct: 729 EPHEKEYILFAHSEKLAVGF-----GLLKLPPGATVTVLKNLRICGDCHTAMMFMSKAVG 783
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
REI+VRD RFHHF++G+CSCG+YW
Sbjct: 784 REIVVRDVRRFHHFKDGECSCGNYW 808
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/333 (20%), Positives = 143/333 (42%), Gaps = 41/333 (12%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y++ G + V + + + W +I+G Q+G+ D + + M D+ TF
Sbjct: 244 YVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTF 303
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASL----DVGVISSLISMYSR------------ 119
SV+S+C+ G+ +H ++++ + + V ++L+++YS+
Sbjct: 304 TSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFD 363
Query: 120 -------------------CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINL 160
GCLD +V+ F Y + + W M++ Y G E+A+ L
Sbjct: 364 TMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKL 423
Query: 161 FEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLG 220
F QM ++ + D T+ + AC G + G + +V+ ++ +
Sbjct: 424 FNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASN-SAGNALLTMYA 482
Query: 221 RCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPY 278
+CG +++A + MP +++ W ++SA H A + ++++ G++P +
Sbjct: 483 KCGAVNDARLVFLVMP-NLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFL 541
Query: 279 VLLSNIHASAKRWQGVSEFREAMRERNVKKEPG 311
+L+ + + +G F E+M+ R+ PG
Sbjct: 542 TILTACNHAGLVDEGFHYF-ESMK-RDFGISPG 572
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 123/285 (43%), Gaps = 43/285 (15%)
Query: 7 VAGSSLAHMYMKSGSLVEGEKVIRLMPI--RNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
VA +SL + +G L + +P R+ + +++ A+ LA + ++ +
Sbjct: 95 VAATSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALL 154
Query: 65 MVG-FRPDKITFVSVISSCSELATLGQGQ--QIHAEVVKAGASLDVGVISSLISMYSRC- 120
G RPD +F ++IS+ ++ L Q+H V+K+GA+ + V ++LI++Y +C
Sbjct: 155 GSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCD 214
Query: 121 ---------------------------------GCLDDSVKTFLECEYSDVVLWSSMIAA 147
G ++ + F E + V+W++MI+
Sbjct: 215 TPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISG 274
Query: 148 YGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVK---KYR 204
Y G +A LF +M ++ ++ TF S+L AC++ G G +++ +
Sbjct: 275 YVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFV 334
Query: 205 RKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
+ L +V L + G + A + M +K + + W T+LS
Sbjct: 335 PEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLK-DVVSWNTILS 378
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 53/91 (58%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE AG++L MY K G++ + V +MP + ++W +I+ Q+G + L+ +
Sbjct: 466 GFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELF 525
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQG 91
+ M G PD+I+F++++++C+ + +G
Sbjct: 526 DQMVAEGIDPDRISFLTILTACNHAGLVDEG 556
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 353 bits (905), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 179/446 (40%), Positives = 262/446 (58%), Gaps = 18/446 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF DL ++L +Y + G + E + IAW L++G Q+G E+ L +
Sbjct: 581 GFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVF 640
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G + TF S + + SE A + QG+Q+HA + K G + V ++LISMY++C
Sbjct: 641 VRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKC 700
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + D+ K FLE + V W+++I AY HG G EA++ F+QM N VT V +L
Sbjct: 701 GSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVL 760
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL +KG+ +F+ M +Y P+ EHY CVVD+L R G L A I+ MP+K +
Sbjct: 761 SACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPD 820
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A++W+TLLSAC HK+ ++ A +L + P+D+A YVLLSN++A +K+W R+
Sbjct: 821 ALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQK 880
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+E+ VKKEPG SW+E+KN +H F +GD++HP + EI Y ++LT GYV D +
Sbjct: 881 MKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSL 940
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP----------------FKYISEIK 404
++++ E+K+ + HSEKLAI+F L +P K++S++
Sbjct: 941 LNELQHEQKDPIIFIHSEKLAISFG--LLSLPATVPINVMKNLRVCNDCHAWIKFVSKVS 998
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
NREIIVRDA RFHHF G CSC DYW
Sbjct: 999 NREIIVRDAYRFHHFEGGACSCKDYW 1024
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 132/262 (50%), Gaps = 6/262 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D ++L +Y G+L+ E + M R+ + + TLI G +Q G E ++ +
Sbjct: 278 GFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELF 337
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M + G PD T S++ +CS TL +GQQ+HA K G + + + +L+++Y++C
Sbjct: 338 KRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKC 397
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
++ ++ FLE E +VVLW+ M+ AYG + +F QM+ +E N T+ S+L
Sbjct: 398 ADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSIL 457
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC--VVDLLGRCGYLDEAAALIRNMPVK 238
C G E G + ++K +L Y C ++D+ + G LD A ++ K
Sbjct: 458 KTCIRLGDLELGEQIHSQIIKT---NFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK 514
Query: 239 ANAIIWKTLLSACKTHKSTDMA 260
+ + W T+++ + D A
Sbjct: 515 -DVVSWTTMIAGYTQYNFDDKA 535
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 129/253 (50%), Gaps = 2/253 (0%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F+L+ S L MY K G L ++ ++V++W T+IAG Q + L +
Sbjct: 481 FQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFR 540
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M G R D++ + +S+C+ L L +GQQIHA+ +G S D+ ++L+++YSRCG
Sbjct: 541 QMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCG 600
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+++S F + E D + W+++++ + G EEA+ +F +M ++ + N+ TF S +
Sbjct: 601 KIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVK 660
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
A S ++G + ++ K E ++ + +CG + +A + K N
Sbjct: 661 AASETANMKQGKQ-VHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTK-NE 718
Query: 242 IIWKTLLSACKTH 254
+ W +++A H
Sbjct: 719 VSWNAIINAYSKH 731
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 122/251 (48%), Gaps = 4/251 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G V + L +Y ++G + +V + +++ +W+ +I+G ++N + + +
Sbjct: 177 GLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLF 236
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M ++G P F SV+S+C ++ +L G+Q+H V+K G S D V ++L+S+Y
Sbjct: 237 CDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHL 296
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L + F D V ++++I G GE+A+ LF++M E + T SL+
Sbjct: 297 GNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLV 356
Query: 181 YACSHCGLKEKGMEFFDLMVK-KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
ACS G +G + K + ++E +++L +C ++ A V+
Sbjct: 357 VACSADGTLFRGQQLHAYTTKLGFASNNKIE--GALLNLYAKCADIETALDYFLETEVE- 413
Query: 240 NAIIWKTLLSA 250
N ++W +L A
Sbjct: 414 NVVLWNVMLVA 424
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 120/267 (44%), Gaps = 10/267 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF + +L ++Y K + + NV+ W ++ GL +D+ + +
Sbjct: 379 GFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAY---GLLDDLRNSF 435
Query: 61 NLMRMVGFR---PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMY 117
+ R + P++ T+ S++ +C L L G+QIH++++K L+ V S LI MY
Sbjct: 436 RIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMY 495
Query: 118 SRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
++ G LD + + DVV W++MIA Y + ++A+ F QM + +++V
Sbjct: 496 AKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLT 555
Query: 178 SLLYACSHC-GLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
+ + AC+ LKE V + L +V L RCG ++E+
Sbjct: 556 NAVSACAGLQALKEGQQIHAQACVSGF--SSDLPFQNALVTLYSRCGKIEESYLAFEQTE 613
Query: 237 VKANAIIWKTLLSACKTHKSTDMAGRI 263
N I W L+S + + + A R+
Sbjct: 614 AGDN-IAWNALVSGFQQSGNNEEALRV 639
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 98/242 (40%), Gaps = 7/242 (2%)
Query: 12 LAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPD 71
L Y+ G L KV MP R + W +I A L +V + M P+
Sbjct: 86 LFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPN 145
Query: 72 KITFVSVISSC-SELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTF 130
+ TF V+ +C +QIHA ++ G V + LI +YSR G +D + + F
Sbjct: 146 EGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVF 205
Query: 131 LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKE 190
D W +MI+ + EAI LF M F S+L AC E
Sbjct: 206 DGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLE 265
Query: 191 KGMEFFDLMVKKYRRKPRLEHYTC--VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
G + L++K + Y C +V L G L A + NM + +A+ + TL+
Sbjct: 266 IGEQLHGLVLKLGFSS---DTYVCNALVSLYFHLGNLISAEHIFSNMSQR-DAVTYNTLI 321
Query: 249 SA 250
+
Sbjct: 322 NG 323
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 99/232 (42%), Gaps = 19/232 (8%)
Query: 67 GFRPDKITFVSVISSCSEL-ATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD 125
G RP+ T ++ C + +L +G+++H++++K G + + L Y G L
Sbjct: 39 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 98
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
+ K F E + W+ MI E LF +M + N+ TF +L AC
Sbjct: 99 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC-- 156
Query: 186 CGLKEKGMEFFDLMVKKYRR----KPRLEHYTC--VVDLLGRCGYLDEAAALIRNMPVKA 239
G FD++ + + R R C ++DL R G++D A + + +K
Sbjct: 157 ----RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKD 212
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEE--ILGVNPQDAAPYVLLSNIHASAK 289
++ W ++S ++ A R+ + +LG+ P PY S + A K
Sbjct: 213 HS-SWVAMISGLSKNECEAEAIRLFCDMYVLGIMP---TPYAFSSVLSACKK 260
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 353 bits (905), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 186/472 (39%), Positives = 277/472 (58%), Gaps = 42/472 (8%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQ----------- 49
G +L+ + L H Y +L + + M +R+ ++W ++ G A+
Sbjct: 390 GMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTF 449
Query: 50 -----------------NGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQ 92
G A + L ++ MR G PDK+ V+V+ +C++L + + +
Sbjct: 450 RELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKAR 509
Query: 93 QIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHG 152
I + + LDV + +++I M+++CGC++ + + F E +V+ WS+MIAAYG+HG
Sbjct: 510 TIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHG 569
Query: 153 KGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY 212
+G +A++LF M + N +T VSLLYACSH GL E+G+ FF LM + Y + ++HY
Sbjct: 570 QGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHY 629
Query: 213 TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNP 272
TCVVDLLGR G LDEA LI +M V+ + +W L AC+THK +A + A +L + P
Sbjct: 630 TCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQP 689
Query: 273 QDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHP 332
Q+ Y+LLSNI+A+A RW+ V++ R+ M +R +KK PG +W+E+ N+ HQF++GD +HP
Sbjct: 690 QNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHP 749
Query: 333 RSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFA-----EH 387
RS EI L+ L ++++L GYVPDT +HD+D E K L HSEKLAIAF EH
Sbjct: 750 RSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELKIGILYSHSEKLAIAFGLIATPEH 809
Query: 388 TRGLIVM---------LPFKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
T I+ K +S I R IIVRDA+RFHHF+ G CSCGDYW
Sbjct: 810 TPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDANRFHHFKEGACSCGDYW 861
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 103/176 (58%)
Query: 11 SLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRP 70
+L MY+K + + + M R+++ W +I G A+ G A + L + MR G P
Sbjct: 198 ALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVP 257
Query: 71 DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTF 130
DK+ V+V+ +C++L + + + I + + LDV + +++I MY++CGC++ + + F
Sbjct: 258 DKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIF 317
Query: 131 LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHC 186
E +V+ WS+MIAAYG+HG+G +A++LF M + +T SLLYAC +C
Sbjct: 318 DRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINC 373
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 128/283 (45%), Gaps = 34/283 (12%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F+LD++ G+++ MY K G + ++ M +NVI+W +IA +G LD +
Sbjct: 290 FQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFR 349
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
+M G PDKIT S++ +C L Q +Q+HA+ G ++ V + L+ YS
Sbjct: 350 MMLSSGMLPDKITLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYR 409
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYG----------------------------FHGK 153
LDD+ F D V WS M+ + F G
Sbjct: 410 ALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGN 469
Query: 154 GEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY- 212
E++ LF++M ++ + V V++++AC+ G K D + R+K +L+
Sbjct: 470 ANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYI---QRKKFQLDVIL 526
Query: 213 -TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
T ++D+ +CG ++ A + M K N I W +++A H
Sbjct: 527 GTAMIDMHAKCGCVESAREIFDRMEEK-NVISWSAMIAAYGYH 568
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 114/250 (45%), Gaps = 23/250 (9%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
++V + L + Y +L + + M +R+ ++W ++ G A+ G + + +
Sbjct: 112 NIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELI 171
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G RPD T VI +C +L L +L+ MY +C ++
Sbjct: 172 RCGARPDNYTLPFVIRACRDLKNLQM---------------------ALVDMYVKCREIE 210
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D+ F + + D+V W+ MI Y GK E++ LFE+M ++ + V V++++AC+
Sbjct: 211 DARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACA 270
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
G K D +++ + + + T ++D+ +CG ++ A + M K N I W
Sbjct: 271 KLGAMHKA-RIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEK-NVISW 328
Query: 245 KTLLSACKTH 254
+++A H
Sbjct: 329 SAMIAAYGYH 338
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 114/297 (38%), Gaps = 36/297 (12%)
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
++S + +C L Q +Q+HA+ G ++ V + LI YS LDD+ F
Sbjct: 84 YISALVNCRNLT---QVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMC 140
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGME 194
D V WS M+ + G F ++ + ++ T ++ AC LK M
Sbjct: 141 VRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRD--LKNLQMA 198
Query: 195 FFDLMVK-----------KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM---PVKAN 240
D+ VK ++ L +T ++ CG +E+ L M V +
Sbjct: 199 LVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPD 258
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQ-DAAPYVLLSNIHASAKRWQGVSEFRE 299
+ T++ AC + A I + I Q D + +++A + E +
Sbjct: 259 KVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFD 318
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPD 356
M E+NV +SW + G K+ +DL+ L+S G +PD
Sbjct: 319 RMEEKNV-----ISWSAMIAAYGYHGQGRKA------LDLFRMMLSS-----GMLPD 359
>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 353 bits (905), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 171/441 (38%), Positives = 274/441 (62%), Gaps = 15/441 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
+++ G+SL MY K G E ++ + I++ + W +I+ Q GL ED L + M+
Sbjct: 434 EILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQ 493
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
D T+ S++ +C+ LA+L G+Q+H+ ++ +G +V S+L+ MY++CG +
Sbjct: 494 RAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIK 553
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D+++ F E + V W+++I+AY +G G+ + LFE+M + + + V+ +S+L ACS
Sbjct: 554 DALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACS 613
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
HCGL E+G+++FD M + Y+ P+ EHY +D+L R G DEA L+ MP + + I+W
Sbjct: 614 HCGLVEEGLQYFDSMTRIYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEIMW 673
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNP-QDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
++L++C HK+ ++A + A ++ + +DAAPYV +SNI+A+A W V + ++AMRE
Sbjct: 674 SSVLNSCGIHKNQELAKKAANQLFNMKVLRDAAPYVTMSNIYAAAGEWDNVGKVKKAMRE 733
Query: 304 RNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHD 363
R VKK P SW+EIK++ H FT DK+HP+ EI L+EL +M +GY PD+ +H+
Sbjct: 734 RGVKKVPAYSWVEIKHKTHVFTANDKTHPQMREIMKKLDELEEKMVKKGYKPDSSCALHN 793
Query: 364 MDSEEKEYNLKHHSEKLAIAFA----EHTRGLIVM----------LPFKYISEIKNREII 409
+D E K +LK+HSE++AIAFA ++VM K IS+I REI
Sbjct: 794 VDEEVKVESLKYHSERIAIAFALISTPEGSPILVMKNLRACTDCHAAIKVISKIVRREIT 853
Query: 410 VRDASRFHHFRNGKCSCGDYW 430
VRD+SRFHHFR+G C+C DYW
Sbjct: 854 VRDSSRFHHFRDGFCTCRDYW 874
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 141/282 (50%), Gaps = 4/282 (1%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F ++ ++L Y K +VE K+ MP + I++ L+ A NG ++ L+ +
Sbjct: 330 FVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFK 389
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
++ GF F +++S + L G+QIH++ + A ++ V +SL+ MY++CG
Sbjct: 390 ELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCG 449
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
++ + F + V W++MI++Y G E+ + LF +M++ + A+ T+ S++
Sbjct: 450 EFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVR 509
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
AC+ G + ++ + + +VD+ +CG + +A + + MPV+ N+
Sbjct: 510 ACASLASLTLGKQLHSHIIGS-GYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVR-NS 567
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLL 281
+ W L+SA + D R+ EE++ G+ P + +L
Sbjct: 568 VSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSIL 609
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 130/250 (52%), Gaps = 2/250 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G++ LV +SL Y K+ SL ++ +P R+ + + L+ G ++ G + ++ +
Sbjct: 228 GYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLF 287
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ VG+RP + TF +++++ +L + GQQ+H VVK +V V ++L+ YS+
Sbjct: 288 FKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKH 347
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
+ ++ K F E D + ++ ++ Y ++G+ +E++ LF++++ F+ + F +LL
Sbjct: 348 DRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLL 407
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
+ + G + + L + +VD+ +CG EA + ++ +++
Sbjct: 408 SIAAISLNLDIGRQIHSQTIVTDAISEILVGNS-LVDMYAKCGEFGEANRIFSDLAIQS- 465
Query: 241 AIIWKTLLSA 250
++ W ++S+
Sbjct: 466 SVPWTAMISS 475
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 97/191 (50%), Gaps = 4/191 (2%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
++ + +++ Y+KSG+L E + M R + W LI G AQN + + M
Sbjct: 131 NIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMG 190
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G PD ++ +++S +E ++ + +Q+H+ V+K G + V +SL+ Y + L
Sbjct: 191 RHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLG 250
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ + F + D V +++++ Y G EAINLF +M++ + + TF ++L A
Sbjct: 251 LAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTA-- 308
Query: 185 HCGLKEKGMEF 195
G++ +EF
Sbjct: 309 --GIQLDDIEF 317
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 95/188 (50%), Gaps = 4/188 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ ++ +GS+L MY K GS+ + ++ + MP+RN ++W LI+ AQNG + L +
Sbjct: 531 GYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLF 590
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV-ISSLISMYSR 119
M G +PD ++ +S++ +CS + +G Q + + + +S I M R
Sbjct: 591 EEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQYFDSMTRIYKLVPKKEHYASTIDMLCR 650
Query: 120 CGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
G D++ K + + D ++WSS++ + G H E A Q+ + + +V+
Sbjct: 651 GGRFDEAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQELAKKAANQLFNMKVLRDAAPYVT 710
Query: 179 L--LYACS 184
+ +YA +
Sbjct: 711 MSNIYAAA 718
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 352 bits (904), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 179/444 (40%), Positives = 274/444 (61%), Gaps = 15/444 (3%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F D+ G+++ MY K G + V +P +VI+W T+I+G AQNG A + ++ YN
Sbjct: 380 FLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYN 439
Query: 62 LMRMVG-FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+M G ++ T+VSV+ +CS+ L QG ++H ++K G LDV V++SL MY +C
Sbjct: 440 IMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKC 499
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L+D++ F + + V W+++IA +GFHG GE+A+ LF++M + + + +TFV+LL
Sbjct: 500 GRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLL 559
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL ++G F++M Y P L+HY C+VD+ GR G L+ A I++M ++ +
Sbjct: 560 SACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPD 619
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A IW LLSAC+ H + D+ +E + V P+ +VLLSN++ASA +W+GV E R
Sbjct: 620 ASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSI 679
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
+ ++K PG S +E+ N+V F G+++HP E+ L L +++K+ GYVPD
Sbjct: 680 AHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFV 739
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAE-HTRGLIVMLPF-------------KYISEIKNR 406
+ D++ +EKE+ L HSE+LAIAFA T + F K+IS+I R
Sbjct: 740 LQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITER 799
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EIIVRD++RFHHF+NG CSCGDYW
Sbjct: 800 EIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 129/255 (50%), Gaps = 15/255 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D+ +SL H+Y + ++ + MP+R++ +W +I+G Q+G A++ L
Sbjct: 180 GFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLS 239
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
N +R + D +T VS++S+C+E +G IH+ +K G ++ V + LI +Y+
Sbjct: 240 NGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEF 295
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L D K F D++ W+S+I AY + + AI+LF++M + + +T +SL
Sbjct: 296 GRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLA 355
Query: 181 YACSHCGLKE--KGMEFFDLMVKKYRRKPRLEHYT---CVVDLLGRCGYLDEAAALIRNM 235
S G + ++ F L R+ LE T VV + + G +D A A+ +
Sbjct: 356 SILSQLGDIRACRSVQGFTL-----RKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWL 410
Query: 236 PVKANAIIWKTLLSA 250
P + I W T++S
Sbjct: 411 P-NTDVISWNTIISG 424
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 118/247 (47%), Gaps = 10/247 (4%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL-M 63
++ + L ++Y G++ + R+V AW +I+G + G + +V+ ++L M
Sbjct: 85 NVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFM 144
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
G PD TF SV+ +C T+ G +IH +K G DV V +SLI +YSR +
Sbjct: 145 LSSGLTPDYRTFPSVLKACR---TVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAV 201
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
++ F E D+ W++MI+ Y G +EA+ L + + VT VSLL AC
Sbjct: 202 GNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMD----SVTVVSLLSAC 257
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
+ G +G+ + K+ + L ++DL G L + + M V+ + I
Sbjct: 258 TEAGDFNRGVTIHSYSI-KHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVR-DLIS 315
Query: 244 WKTLLSA 250
W +++ A
Sbjct: 316 WNSIIKA 322
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 78/160 (48%), Gaps = 12/160 (7%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G LD+ +SLA MY K G L + + +P N + W TLIA +G E + +
Sbjct: 481 GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLF 540
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSL------I 114
M G +PD ITFV+++S+CS + +GQ E+++ D G+ SL +
Sbjct: 541 KEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCF-EMMQT----DYGITPSLKHYGCMV 595
Query: 115 SMYSRCGCLDDSVKTFLECEYS-DVVLWSSMIAAYGFHGK 153
MY R G L+ ++K D +W ++++A HG
Sbjct: 596 DMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGN 635
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
Query: 86 ATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMI 145
L + +HA +V + +V + + L+++Y G + + TF + DV W+ MI
Sbjct: 65 TNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMI 124
Query: 146 AAYGFHGKGEEAINLFEQ-MEQKEFEANDVTFVSLLYAC 183
+ YG G E I F M + TF S+L AC
Sbjct: 125 SGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC 163
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 179/445 (40%), Positives = 275/445 (61%), Gaps = 26/445 (5%)
Query: 6 LVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRM 65
+V G+++ MY K G + KV L+P+++V++W TLI+G QNGLA + ++ Y +M
Sbjct: 410 VVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEE 469
Query: 66 VG-FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+ ++ T+VS++++ + + L QG +IH ++K LDV V + LI +Y +CG L
Sbjct: 470 CREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLV 529
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D++ F + V W+++I+ +G HG GE+A+ LF +M+ + + + VTF+SLL ACS
Sbjct: 530 DAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACS 589
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL ++G FF LM ++Y KP L+HY C+VDLLGR G+L+ A I++MP+ +A IW
Sbjct: 590 HSGLVDEGKWFFHLM-QEYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIW 648
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
LL AC+ H + ++ ++ + V+ ++ YVLLSNI+A+ +W+GV + R RER
Sbjct: 649 GALLGACRIHGNIELGKFASDRLFEVDSENVGYYVLLSNIYANVGKWEGVDKVRSLARER 708
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
+KK PG S +E+ +V F G++SHP+ EI L LT++MK GY+PD + D+
Sbjct: 709 GLKKTPGWSSIEVNRRVDIFYTGNQSHPKCKEIYAELRILTAKMKSLGYIPDYSFVLQDV 768
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKN 405
+ +EKE+ L HSE+LAIAF G+I P K+IS I
Sbjct: 769 EEDEKEHILTSHSERLAIAF-----GIISTPPKSAIRIFKNLRVCGDCHNATKFISRITE 823
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
REI+VRD+ RFHHF+NG CSCGDYW
Sbjct: 824 REIVVRDSKRFHHFKNGICSCGDYW 848
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 125/250 (50%), Gaps = 1/250 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ D+ +SL HMY + G + + MP R++ +W +I+G QNG A LD
Sbjct: 202 GFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVL 261
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ MR+ G D +T S++ C++L + IH V+K G ++ V ++LI+MY++
Sbjct: 262 DEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKF 321
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L D+ K F + DVV W+S+IAAY + A F +M+ E + +T VSL
Sbjct: 322 GNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLA 381
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
+ + ++++ + V+D+ + G +D A + +PVK +
Sbjct: 382 SIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVK-D 440
Query: 241 AIIWKTLLSA 250
+ W TL+S
Sbjct: 441 VVSWNTLISG 450
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 136/284 (47%), Gaps = 9/284 (3%)
Query: 12 LAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLD-QYNLMRMVGFRP 70
L ++Y G + + ++V W ++I+ +NG + +D Y L+ + F+
Sbjct: 114 LVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQA 173
Query: 71 DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTF 130
D TF V+ +C TL G++IH V K G DV V +SLI MYSR G + + F
Sbjct: 174 DFYTFPPVLKACQ---TLVDGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLF 230
Query: 131 LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKE 190
+ + D+ W++MI+ +G +A+++ ++M + + VT S+L C+ G
Sbjct: 231 DDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLG-DI 289
Query: 191 KGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
L V K+ + L ++++ + G L +A + + M ++ + + W ++++A
Sbjct: 290 STATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLR-DVVSWNSIIAA 348
Query: 251 CKTHKS--TDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQ 292
+ + T ++ G+ P D V L++I A ++ ++
Sbjct: 349 YEQNDDPVTARGFFFKMQLNGLEP-DLLTLVSLASIAAQSRDYK 391
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 82/180 (45%), Gaps = 3/180 (1%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
LD+ G+ L +Y K G LV+ + +P + + W +I+ +G E L +
Sbjct: 508 LHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFR 567
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M+ G +PD +TF+S++S+CS + +G+ + + G + ++ + R G
Sbjct: 568 EMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQEYGIKPSLKHYGCMVDLLGRAG 627
Query: 122 CLDDSVKTFLECE-YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
L+ + + + D +W +++ A HG E + F E ++ +V + LL
Sbjct: 628 FLEMAYDFIKDMPLHPDASIWGALLGACRIHGNIE--LGKFASDRLFEVDSENVGYYVLL 685
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 100/208 (48%), Gaps = 25/208 (12%)
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
+ ++I F S+ SC++ +++HA +V +G + L+++Y+ G + S
Sbjct: 73 KNEEIDFNSLFDSCTKTLL---AKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRG 129
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQ-KEFEANDVTFVSLLYACS--- 184
TF + + DV W+SMI+AY +G EAI+ F Q+ +F+A+ TF +L AC
Sbjct: 130 TFDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLV 189
Query: 185 -----HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
HC + + G + +D+ V ++ + R G++ A +L +MP +
Sbjct: 190 DGRKIHCWVFKLGFQ-WDVFVA-----------ASLIHMYSRFGFVGIARSLFDDMPFR- 236
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEI 267
+ W ++S + + A + +E+
Sbjct: 237 DMGSWNAMISGLIQNGNAAQALDVLDEM 264
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 172/429 (40%), Positives = 267/429 (62%), Gaps = 14/429 (3%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y + G + E + + MP R+ ++W +IAG +Q+G + + L + M G R ++ +F
Sbjct: 353 YAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSF 412
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
S +S+C+++ L G+Q+H +VK G V ++L+ MY +CG ++++ F E
Sbjct: 413 SSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAG 472
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
D+V W++MIA Y HG GE A+ FE M+++ + +D T V++L ACSH GL +KG ++
Sbjct: 473 KDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQY 532
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK 255
F M + Y P +HY C+VDLLGR G L++A L++NMP + +A IW TLL A + H
Sbjct: 533 FYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHG 592
Query: 256 STDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWL 315
+T++A A++I + P+++ YVLLSN++AS+ RW V + R MR++ VKK PG SW+
Sbjct: 593 NTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWI 652
Query: 316 EIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKH 375
EI+N+ H F++GD+ HP EI +LEEL MK GYV T +HD++ EEKE +++
Sbjct: 653 EIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRY 712
Query: 376 HSEKLAIAFA----EHTRGLIVML----------PFKYISEIKNREIIVRDASRFHHFRN 421
HSE+LA+A+ R + V+ KY++ I R II+RD +RFHHF++
Sbjct: 713 HSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKD 772
Query: 422 GKCSCGDYW 430
G CSCGDYW
Sbjct: 773 GSCSCGDYW 781
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 134/282 (47%), Gaps = 16/282 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+V+ +++ Y +SG + E ++ P+++V W +++G QN + E+ + +
Sbjct: 249 DVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELF---- 304
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIH--AEVVKAGASLDVGVISSLISMYSRCGC 122
DK+ + +S + LA QG+++ E+ +V +++I+ Y++CG
Sbjct: 305 ------DKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGK 358
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
+ ++ F + D V W++MIA Y G EA+ LF QME++ N +F S L
Sbjct: 359 ISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALST 418
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
C+ E G + +VK ++ + +CG ++EA L + M K + +
Sbjct: 419 CADVVALELGKQLHGRLVKGGYETGCFVGNALLL-MYCKCGSIEEANDLFKEMAGK-DIV 476
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLS 282
W T+++ H ++A R E + G+ P DA +LS
Sbjct: 477 SWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLS 518
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 96/192 (50%), Gaps = 13/192 (6%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+E G++L MY K GS+ E + + M +++++W T+IAG +++G E L +
Sbjct: 439 GYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFF 498
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISS------LI 114
M+ G +PD T V+V+S+CS + +G+Q + + D GV+ + ++
Sbjct: 499 ESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQ-----DYGVMPNSQHYACMV 553
Query: 115 SMYSRCGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEAND 173
+ R G L+D+ + D +W +++ A HG E A +++ E E +
Sbjct: 554 DLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSG 613
Query: 174 V-TFVSLLYACS 184
+ +S LYA S
Sbjct: 614 MYVLLSNLYASS 625
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 133/277 (48%), Gaps = 45/277 (16%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E DLV+ + + Y+++ +L + ++ +MP R+V +W T+++G AQNG +D ++
Sbjct: 123 ERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDR 182
Query: 63 MRMVGFRPDK--ITFVSVISS------CSELATLGQGQQIHA---------------EVV 99
M P+K +++ +++S+ E L + ++ A ++V
Sbjct: 183 M------PEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIV 236
Query: 100 KAGASL------DVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGK 153
+A DV +++I+ Y++ G +D++ + F E DV W++M++ Y +
Sbjct: 237 EARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRM 296
Query: 154 GEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYT 213
EEA LF++M ++ N+V++ ++L E E FD+M + + +
Sbjct: 297 VEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKELFDVMPCR-----NVSTWN 347
Query: 214 CVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
++ +CG + EA L MP K + + W +++
Sbjct: 348 TMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAG 383
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 108/243 (44%), Gaps = 34/243 (13%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNG---LAEDVLDQYNLMRMVGFRPDK 72
YM++G E +V + MP + +++ +I+G +NG LA + D+ D
Sbjct: 74 YMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMP-------ERDL 126
Query: 73 ITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLE 132
+++ +I LG+ + E+ + DV ++++S Y++ GC+DD+ F
Sbjct: 127 VSWNVMIKGYVRNRNLGKAR----ELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDR 182
Query: 133 CEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEK- 191
+ V W+++++AY + K EEA LF+ E + + + C G +K
Sbjct: 183 MPEKNDVSWNALLSAYVQNSKMEEACMLFKSRE---------NWALVSWNCLLGGFVKKK 233
Query: 192 ----GMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTL 247
+FFD M + + + ++ + G +DEA L PV+ + W +
Sbjct: 234 KIVEARQFFDSMNVR-----DVVSWNTIITGYAQSGKIDEARQLFDESPVQ-DVFTWTAM 287
Query: 248 LSA 250
+S
Sbjct: 288 VSG 290
>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 668
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 188/445 (42%), Positives = 275/445 (61%), Gaps = 16/445 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ ++ GSSL MY + G L E V + +N ++W LI+G A+ G E+ L +
Sbjct: 225 GFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNALISGFARKGEGEEALGLF 284
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ GF + T+ +++ S S +L QG+ +HA ++K+G L V ++L+ MY++
Sbjct: 285 VKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKS 344
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQME-QKEFEANDVTFVSL 179
G + D+ K F DVV +SM+ Y HG G+EA+ LFE+M E E ND+TF+S+
Sbjct: 345 GNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSV 404
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L ACSH GL ++G+ +F+LM KKY +P+L HYT VVDL GR G LD+A + I MP++
Sbjct: 405 LTACSHAGLLDEGLYYFELM-KKYGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIEP 463
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
NA IW LL A K HK+T+M A+++L ++P + LLSNI+ASA +W+ V++ R+
Sbjct: 464 NATIWGALLGASKMHKNTEMGAYAAQKVLELDPFYPGAHTLLSNIYASAGQWKDVAKVRK 523
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M++ +KKEP SW+EI+N VH F+ D SHP+ ++ E L ++K GYVPDT
Sbjct: 524 EMKDSGLKKEPACSWVEIENSVHIFSANDISHPQKNKVYEMWENLNQKIKEIGYVPDTSH 583
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKN 405
+D +EKE NL++HSEKLA+AFA G ++ + KY+S +
Sbjct: 584 VHVFVDQQEKELNLQYHSEKLALAFALLNTKPGSVIRIMKNIRVCGDCHSAIKYVSLVVK 643
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
REIIVRD +RFHHFR+G CSC DYW
Sbjct: 644 REIIVRDTNRFHHFRDGSCSCRDYW 668
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 114/207 (55%), Gaps = 3/207 (1%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F DLV +S+ MY K GSL +V M +++V+ W ++I G +Q+G A
Sbjct: 122 FRNDLVIKNSILFMYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALV 181
Query: 62 L-MRMV--GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
L + MV G RP++ S++ C L + G+QIH K G +V V SSL+ MY+
Sbjct: 182 LFLEMVRDGLRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYA 241
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
RCG L +S F E E + V W+++I+ + G+GEEA+ LF +M+++ F A + T+ +
Sbjct: 242 RCGELRESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSA 301
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRR 205
LL + S G E+G M+K ++
Sbjct: 302 LLCSSSTTGSLEQGKWLHAHMMKSGKK 328
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 91/193 (47%), Gaps = 5/193 (2%)
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+L+ PD+ + ++ C+ L L QG+ +H ++ + D+ + +S++ MY++C
Sbjct: 80 DLINNGSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKC 139
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAY---GFHGKGEEAINLFEQMEQKEFEANDVTFV 177
G L+ + + F E DVV W+SMI Y G+ A+ LF +M + N+
Sbjct: 140 GSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALS 199
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
SL+ C G G + KY + + + +VD+ RCG L E+ + +
Sbjct: 200 SLVKCCGFLGSCVDGKQIHGC-CWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELES 258
Query: 238 KANAIIWKTLLSA 250
K N + W L+S
Sbjct: 259 K-NEVSWNALISG 270
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 179/446 (40%), Positives = 262/446 (58%), Gaps = 18/446 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF DL ++L +Y + G + E + IAW L++G Q+G E+ L +
Sbjct: 621 GFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVF 680
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G + TF S + + SE A + QG+Q+HA + K G + V ++LISMY++C
Sbjct: 681 VRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKC 740
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + D+ K FLE + V W+++I AY HG G EA++ F+QM N VT V +L
Sbjct: 741 GSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVL 800
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL +KG+ +F+ M +Y P+ EHY CVVD+L R G L A I+ MP+K +
Sbjct: 801 SACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPD 860
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A++W+TLLSAC HK+ ++ A +L + P+D+A YVLLSN++A +K+W R+
Sbjct: 861 ALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQK 920
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+E+ VKKEPG SW+E+KN +H F +GD++HP + EI Y ++LT GYV D +
Sbjct: 921 MKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSL 980
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP----------------FKYISEIK 404
++++ E+K+ + HSEKLAI+F L +P K++S++
Sbjct: 981 LNELQHEQKDPIIFIHSEKLAISFG--LLSLPATVPINVMKNLRVCNDCHAWIKFVSKVS 1038
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
NREIIVRDA RFHHF G CSC DYW
Sbjct: 1039 NREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 132/262 (50%), Gaps = 6/262 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D ++L +Y G+L+ E + M R+ + + TLI G +Q G E ++ +
Sbjct: 318 GFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELF 377
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M + G PD T S++ +CS TL +GQQ+HA K G + + + +L+++Y++C
Sbjct: 378 KRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKC 437
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
++ ++ FLE E +VVLW+ M+ AYG + +F QM+ +E N T+ S+L
Sbjct: 438 ADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSIL 497
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC--VVDLLGRCGYLDEAAALIRNMPVK 238
C G E G + ++K +L Y C ++D+ + G LD A ++ K
Sbjct: 498 KTCIRLGDLELGEQIHSQIIKT---NFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK 554
Query: 239 ANAIIWKTLLSACKTHKSTDMA 260
+ + W T+++ + D A
Sbjct: 555 -DVVSWTTMIAGYTQYNFDDKA 575
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 129/253 (50%), Gaps = 2/253 (0%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F+L+ S L MY K G L ++ ++V++W T+IAG Q + L +
Sbjct: 521 FQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFR 580
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M G R D++ + +S+C+ L L +GQQIHA+ +G S D+ ++L+++YSRCG
Sbjct: 581 QMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCG 640
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+++S F + E D + W+++++ + G EEA+ +F +M ++ + N+ TF S +
Sbjct: 641 KIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVK 700
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
A S ++G + ++ K E ++ + +CG + +A + K N
Sbjct: 701 AASETANMKQGKQ-VHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTK-NE 758
Query: 242 IIWKTLLSACKTH 254
+ W +++A H
Sbjct: 759 VSWNAIINAYSKH 771
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 122/251 (48%), Gaps = 4/251 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G V + L +Y ++G + +V + +++ +W+ +I+G ++N + + +
Sbjct: 217 GLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLF 276
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M ++G P F SV+S+C ++ +L G+Q+H V+K G S D V ++L+S+Y
Sbjct: 277 CDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHL 336
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L + F D V ++++I G GE+A+ LF++M E + T SL+
Sbjct: 337 GNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLV 396
Query: 181 YACSHCGLKEKGMEFFDLMVK-KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
ACS G +G + K + ++E +++L +C ++ A V+
Sbjct: 397 VACSADGTLFRGQQLHAYTTKLGFASNNKIE--GALLNLYAKCADIETALDYFLETEVE- 453
Query: 240 NAIIWKTLLSA 250
N ++W +L A
Sbjct: 454 NVVLWNVMLVA 464
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 120/267 (44%), Gaps = 10/267 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF + +L ++Y K + + NV+ W ++ GL +D+ + +
Sbjct: 419 GFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAY---GLLDDLRNSF 475
Query: 61 NLMRMVGFR---PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMY 117
+ R + P++ T+ S++ +C L L G+QIH++++K L+ V S LI MY
Sbjct: 476 RIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMY 535
Query: 118 SRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
++ G LD + + DVV W++MIA Y + ++A+ F QM + +++V
Sbjct: 536 AKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLT 595
Query: 178 SLLYACSHC-GLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
+ + AC+ LKE V + L +V L RCG ++E+
Sbjct: 596 NAVSACAGLQALKEGQQIHAQACVSGF--SSDLPFQNALVTLYSRCGKIEESYLAFEQTE 653
Query: 237 VKANAIIWKTLLSACKTHKSTDMAGRI 263
N I W L+S + + + A R+
Sbjct: 654 AGDN-IAWNALVSGFQQSGNNEEALRV 679
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 98/242 (40%), Gaps = 7/242 (2%)
Query: 12 LAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPD 71
L Y+ G L KV MP R + W +I A L +V + M P+
Sbjct: 126 LFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPN 185
Query: 72 KITFVSVISSC-SELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTF 130
+ TF V+ +C +QIHA ++ G V + LI +YSR G +D + + F
Sbjct: 186 EGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVF 245
Query: 131 LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKE 190
D W +MI+ + EAI LF M F S+L AC E
Sbjct: 246 DGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLE 305
Query: 191 KGMEFFDLMVKKYRRKPRLEHYTC--VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
G + L++K + Y C +V L G L A + NM + +A+ + TL+
Sbjct: 306 IGEQLHGLVLKLGFSS---DTYVCNALVSLYFHLGNLISAEHIFSNMSQR-DAVTYNTLI 361
Query: 249 SA 250
+
Sbjct: 362 NG 363
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 99/232 (42%), Gaps = 19/232 (8%)
Query: 67 GFRPDKITFVSVISSCSEL-ATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD 125
G RP+ T ++ C + +L +G+++H++++K G + + L Y G L
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
+ K F E + W+ MI E LF +M + N+ TF +L AC
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC-- 196
Query: 186 CGLKEKGMEFFDLMVKKYRR----KPRLEHYTC--VVDLLGRCGYLDEAAALIRNMPVKA 239
G FD++ + + R R C ++DL R G++D A + + +K
Sbjct: 197 ----RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKD 252
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEE--ILGVNPQDAAPYVLLSNIHASAK 289
++ W ++S ++ A R+ + +LG+ P PY S + A K
Sbjct: 253 HS-SWVAMISGLSKNECEAEAIRLFCDMYVLGIMP---TPYAFSSVLSACKK 300
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 169/450 (37%), Positives = 277/450 (61%), Gaps = 25/450 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
+E G++L Y+K G+ ++ KV ++ ++++AW ++AG AQ G E+ +
Sbjct: 423 NYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLF 482
Query: 61 NLMRMVGFRPDKITFVSVISSC-SELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ + G +P++ TF SVI++C S A QG+Q HA +K + + V S+L++MY++
Sbjct: 483 HQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAK 542
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G +D + + F + D+V W+SMI+ Y HG+ ++A+ +F++M+++ + + VTF+ +
Sbjct: 543 RGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGV 602
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
+ AC+H GL EKG ++F+ M+ + P ++HY+C++DL R G L++A +I MP
Sbjct: 603 ITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPP 662
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
A +W+TLL A + H++ ++ AE+++ + P+D+A YVLLSN++A+A WQ + R+
Sbjct: 663 GATVWRTLLGAARVHRNVELGELAAEKLISLQPEDSAAYVLLSNMYAAAGNWQERTNVRK 722
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M +R VKKEPG SW+E+KN+ + F GD +HP S +I L EL+ +K GY PDT
Sbjct: 723 LMDKRKVKKEPGYSWIEVKNKTYSFLAGDLTHPLSNQIYSKLSELSIRLKDAGYQPDTKN 782
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYI 400
HD++ E+KE L HHSE+LAIAF GLI P K +
Sbjct: 783 VFHDIEDEQKETILSHHSERLAIAF-----GLIATPPEIPIQIVKNLRVCGDCHNFTKLV 837
Query: 401 SEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
S ++ R I+VRD++RFHHF++G CSCGDYW
Sbjct: 838 SLVEQRYIVVRDSNRFHHFKDGLCSCGDYW 867
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 139/270 (51%), Gaps = 9/270 (3%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G+SL MYMK+ ++ +G +V M RNV++W +L+AG + NGL V + + M+ G
Sbjct: 131 GTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGV 190
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
P++ T +VI++ +G G Q+HA VVK G + V +SLIS+YSR G L D+
Sbjct: 191 LPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARD 250
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F + E D V W+SMIA Y +G+ E +F +M+ + +TF S++ +C+ L
Sbjct: 251 VFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCA--SL 308
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDL---LGRCGYLDEAAALIRNMPVKANAIIWK 245
+E + LM K + + L L +C +D+A +L M N + W
Sbjct: 309 RE--LALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWT 366
Query: 246 TLLSACKTHKSTDMAGRIAEEIL--GVNPQ 273
++S C + D A + ++ GV P
Sbjct: 367 AMISGCLQNGGNDQAVNLFSQMRREGVKPN 396
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 148/291 (50%), Gaps = 12/291 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE + +SL +Y + G L + V M IR+ + W ++IAG +NG +V + +
Sbjct: 224 GFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIF 283
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
N M++ G +P +TF SVI SC+ L L + + + +K+G + D VI++L+ S+C
Sbjct: 284 NKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKC 343
Query: 121 GCLDDSVKTF-LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
+DD++ F L E +VV W++MI+ +G ++A+NLF QM ++ + N T+ ++
Sbjct: 344 KEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAI 403
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L + E E ++ Y R + T ++D + G +A + + K
Sbjct: 404 LTVHYPVFVSEMHAE---VIKTNYERSSSVG--TALLDAYVKLGNTIDAVKVFEIIEAK- 457
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASA 288
+ + W +L+ T+ A ++ +++ G+ P + + S I+A A
Sbjct: 458 DLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNE---FTFSSVINACA 505
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 138/286 (48%), Gaps = 17/286 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPI-RNVIAWITLIAGKAQNGLAEDVLDQ 59
GF D + ++L K + + + LM +NV++W +I+G QNG + ++
Sbjct: 325 GFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNL 384
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
++ MR G +P+ T+ ++++ + ++HAEV+K V ++L+ Y +
Sbjct: 385 FSQMRREGVKPNHFTYSAILTVHYPVFV----SEMHAEVIKTNYERSSSVGTALLDAYVK 440
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G D+VK F E D++ WS+M+A Y G+ EEA LF Q+ ++ + N+ TF S+
Sbjct: 441 LGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSV 500
Query: 180 LYAC-SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV----VDLLGRCGYLDEAAALIRN 234
+ AC S E+G +F Y K RL + CV V + + G +D A + +
Sbjct: 501 INACASPTAAAEQGKQF-----HAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKR 555
Query: 235 MPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQ-DAAPYV 279
+ + + W +++S H A + +E+ N DA ++
Sbjct: 556 QKER-DLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFI 600
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 90/183 (49%), Gaps = 2/183 (1%)
Query: 68 FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV 127
+PD+ T V + C+ G+Q+H + VK G V V +SL+ MY + ++D
Sbjct: 89 LQPDESTLSCVFNICAGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGR 148
Query: 128 KTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCG 187
+ F E +VV W+S++A Y ++G LF QM+ + N T +++ A + G
Sbjct: 149 RVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEG 208
Query: 188 LKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTL 247
+ G++ MV K+ + + + ++ L R G L +A + M ++ + + W ++
Sbjct: 209 VVGIGLQ-VHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIR-DWVTWNSM 266
Query: 248 LSA 250
++
Sbjct: 267 IAG 269
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 174/450 (38%), Positives = 266/450 (59%), Gaps = 26/450 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF DL+ ++L HMY K G++ + +V M R+V++W +I +NG E+ + +
Sbjct: 394 GFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETF 453
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+LM+ PD +T+++++++C L L G +I+ + +KA + V ++LI+M +
Sbjct: 454 HLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGNALINMNVKH 513
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ + F DVV W+ MI Y HG EA++LF++M ++ F N VTFV +L
Sbjct: 514 GSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVL 573
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACS G E+G FF ++ P +E Y C+VDLLGR G LDEA LI MP+K N
Sbjct: 574 SACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPN 633
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+ IW TLL+AC+ + + D+A R AE L P D A YV LS+++A+A W+ V++ R+
Sbjct: 634 SSIWSTLLAACRIYGNLDVAERAAERCLMSEPYDGAVYVQLSHMYAAAGMWENVAKVRKV 693
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M R V+KE G +W+E++ ++H F + D+SHP++ EI L L + +K GY+P T
Sbjct: 694 MESRGVRKEQGCTWIEVEGKLHTFVVEDRSHPQAGEIYAELARLMTAIKREGYIPVTQNV 753
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP--------------------FKYI 400
+H++ +EKE + +HSEKLAIA+ ++ LP K+I
Sbjct: 754 LHNVGEQEKEEAISYHSEKLAIAYG------VLSLPSGAPIRIFKNLRVCGDCHSASKFI 807
Query: 401 SEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
S++ REII RDASRFHHF+NG CSCGDYW
Sbjct: 808 SKVTGREIIARDASRFHHFKNGVCSCGDYW 837
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 148/270 (54%), Gaps = 6/270 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D+ ++L MYM GS+ +V M +R+V++W +I G A+N ED +
Sbjct: 293 GLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLF 352
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G +PD+IT++ +I++C+ A L ++IH++VV+AG D+ V ++L+ MY++C
Sbjct: 353 ATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKC 412
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + D+ + F DVV WS+MI AY +G GEEA F M++ E + VT+++LL
Sbjct: 413 GAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLL 472
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC H G + GME + +K + ++++ + G ++ A + NM V+ +
Sbjct: 473 NACGHLGALDLGMEIYTQAIKA-DLVSHIPVGNALINMNVKHGSIERARYIFENM-VQRD 530
Query: 241 AIIWKTLLSACKTH----KSTDMAGRIAEE 266
+ W ++ H ++ D+ R+ +E
Sbjct: 531 VVTWNVMIGGYSLHGNAREALDLFDRMLKE 560
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 127/250 (50%), Gaps = 2/250 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D G++L MY+K GS+ +V + R+V + +I G A++G E +
Sbjct: 192 GFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLF 251
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ GF+P++I+F+S++ CS L G+ +HA+ + G DV V ++LI MY C
Sbjct: 252 YRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGC 311
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ + + F + + DVV W+ MI Y + E+A LF M+++ + + +T++ ++
Sbjct: 312 GSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHII 371
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+ E +V+ L T +V + +CG + +A + M + +
Sbjct: 372 NACASSADLSLAREIHSQVVRAGFGTDLLVD-TALVHMYAKCGAIKDARQVFDAMS-RRD 429
Query: 241 AIIWKTLLSA 250
+ W ++ A
Sbjct: 430 VVSWSAMIGA 439
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 101/184 (54%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +L++ ++L ++ G+++E + + + V+ W +IAG AQ G ++ +
Sbjct: 91 GRQLNIYELNTLIKLHSICGNMLEARQTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALF 150
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M P ITF+ V+ +CS A L G++ HA+V+K G D + ++L+SMY +
Sbjct: 151 RQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKG 210
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +D + + F DV ++ MI Y G GE+A LF +M+Q+ F+ N ++F+S+L
Sbjct: 211 GSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSIL 270
Query: 181 YACS 184
CS
Sbjct: 271 DGCS 274
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 73/131 (55%)
Query: 71 DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTF 130
D T+V + C L G G+Q+ ++++G L++ +++LI ++S CG + ++ +TF
Sbjct: 60 DSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTF 119
Query: 131 LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKE 190
E VV W+++IA Y G +EA LF QM + E + +TF+ +L ACS +
Sbjct: 120 DSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLK 179
Query: 191 KGMEFFDLMVK 201
G EF ++K
Sbjct: 180 LGKEFHAQVIK 190
>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Brachypodium distachyon]
Length = 814
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 179/445 (40%), Positives = 272/445 (61%), Gaps = 25/445 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
DLV G++L MY K G L + + ++W +I G QNG E+ L + MR
Sbjct: 376 DLV-GNALIDMYSKCGMLDAAKTNFINKNDKTGVSWTAMITGCVQNGQQEEALQLFCGMR 434
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G PD+ TF S I + S LA +G G+Q+H+ ++++G V S+L+ MY++CGCLD
Sbjct: 435 RAGLSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRSGHMSSVFSGSALLDMYTKCGCLD 494
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
++++TF E + + W+++I+AY +G+ + AI +FE M F+ + VTF+S+L ACS
Sbjct: 495 EALQTFDEMPERNSISWNAVISAYAHYGQAKNAIKMFEGMLCYGFKPDSVTFLSVLSACS 554
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL E+ M++F+LM +Y P EHY+CV+D LGR G D+ ++ MP + + IIW
Sbjct: 555 HNGLAEECMKYFELMEYEYGISPWKEHYSCVIDTLGRVGRFDKVQEMLGEMPFEDDPIIW 614
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
++L +C+TH + D+A AE++ + DA PYV+LSNI A A +W+ + ++ MR+R
Sbjct: 615 SSILHSCRTHGNQDLARVAAEKLFSMGSTDATPYVILSNIFAKAGKWEDAAGVKKIMRDR 674
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
++KE G SW+E+K++V+ F+ D+++P EI LE L EM +GY PDT + +
Sbjct: 675 GLRKETGYSWVEVKHKVYSFSSNDQTNPMITEIKDELERLYKEMDKQGYKPDTSCTLQQV 734
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKN 405
D + K +LK+HSE+LAIAFA LI P K +S+I N
Sbjct: 735 DDDIKLESLKYHSERLAIAFA-----LINTPPGTPIRVMKNLSACVDCHSAIKMMSKIVN 789
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
R+IIVRD+SRFHHF++G CSCGDYW
Sbjct: 790 RDIIVRDSSRFHHFKDGFCSCGDYW 814
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 135/280 (48%), Gaps = 4/280 (1%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
++ +SL Y K L E +K+ M R+ +++ +IAG A N A VL + M+
Sbjct: 274 NVFVNNSLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFREMQ 333
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+ F + + S++S + +G G+QIHA++V G S + V ++LI MYS+CG LD
Sbjct: 334 SLSFDRQALPYASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLD 393
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ F+ V W++MI +G+ EEA+ LF M + + TF S + A S
Sbjct: 394 AAKTNFINKNDKTGVSWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASS 453
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
+ + G + +++ + ++D+ +CG LDEA MP + N+I W
Sbjct: 454 NLAMIGLGRQLHSYLIRSGHMSSVFSG-SALLDMYTKCGCLDEALQTFDEMPER-NSISW 511
Query: 245 KTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLS 282
++SA + A ++ E +L G P +LS
Sbjct: 512 NAVISAYAHYGQAKNAIKMFEGMLCYGFKPDSVTFLSVLS 551
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 122/258 (47%), Gaps = 25/258 (9%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
++V ++L Y K G L +V + MP R+ + + ++ G ++ G + LD + MR
Sbjct: 174 NVVVCNTLLDAYCKHGLLAAARRVFQEMPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMR 233
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G + TF +V++ + + L G+Q+H V +A +S +V V +SL+ YS+C CLD
Sbjct: 234 RKGLAATRFTFSTVLTVATGVGDLCLGRQVHGLVARATSS-NVFVNNSLLDFYSKCDCLD 292
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY--- 181
+ K F E D V ++ MIA Y ++ + LF +M+ F+ + + SLL
Sbjct: 293 EMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFREMQSLSFDRQALPYASLLSVAG 352
Query: 182 ACSHCGLKEK--------GMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIR 233
+ H G+ ++ G+ DL+ ++D+ +CG LD A
Sbjct: 353 SVPHIGIGKQIHAQLVLLGLSSEDLVGN------------ALIDMYSKCGMLDAAKTNFI 400
Query: 234 NMPVKANAIIWKTLLSAC 251
N K + W +++ C
Sbjct: 401 NKNDK-TGVSWTAMITGC 417
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 83/209 (39%), Gaps = 35/209 (16%)
Query: 16 YMKSGSLVEGEKVIRLMP--IRNVIAWITLIAG--KAQNGLAEDVLDQYNLMRMVGFRPD 71
Y +SG L + P +R+ + W +I A A D + + M G PD
Sbjct: 76 YSRSGQLSAAHHLFLSSPPHLRDAVTWTVMIGAFASAPGARASDAVSLFRDMLREGVAPD 135
Query: 72 KITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFL 131
++T +V++ +G + +I+SL + G L
Sbjct: 136 RVTVATVLNLPPA----------------SGGTAAAIIIASLHPFALKLGLL-------- 171
Query: 132 ECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEK 191
+S+VV+ ++++ AY HG A +F++M ++ VT+ +++ CS G +
Sbjct: 172 ---HSNVVVCNTLLDAYCKHGLLAAARRVFQEMPHRD----SVTYNAMMMGCSKEGSHAE 224
Query: 192 GMEFFDLMVKKYRRKPRLEHYTCVVDLLG 220
++ F M +K R T + G
Sbjct: 225 ALDLFAAMRRKGLAATRFTFSTVLTVATG 253
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 181/448 (40%), Positives = 268/448 (59%), Gaps = 24/448 (5%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
++ ++ GS+L MY K S+ E V R M +N+I+W LI G QNG +E+ + ++
Sbjct: 303 YDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFS 362
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M+ G PD T SVISSC+ LA+L +G Q H + +G + V ++L+++Y +CG
Sbjct: 363 EMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCG 422
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
++D+ + F E + D V W+++++ Y G+ +E I+LFE+M K + + VTF+ +L
Sbjct: 423 SIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLS 482
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
ACS G EKG +F M K + P +HYTC++DL R G L EA I+ MP+ +A
Sbjct: 483 ACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDA 542
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
I W TLLSAC+ ++ AE +L ++PQ+ A YVLL ++HA+ +W V++ R M
Sbjct: 543 IGWGTLLSACRLRGDMEIGKWAAENLLEIDPQNPASYVLLCSMHAAKGQWNEVAQLRRGM 602
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
R+R VKKEPG SW++ KN+VH F+ D+SHP S I LE L S+M GY PD + +
Sbjct: 603 RDRQVKKEPGCSWIKYKNKVHIFSADDQSHPCSKGIYEKLEWLNSKMLEEGYKPDVSSVL 662
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVM---LPF----------------KYISE 402
HD+ +K + + HHSEKLAIAF GLI + +P K+IS+
Sbjct: 663 HDVADTDKVHMVSHHSEKLAIAF-----GLIFVPQEMPIRIVKNLRVCVDCHNATKFISK 717
Query: 403 IKNREIIVRDASRFHHFRNGKCSCGDYW 430
I R+I+VRDA RFH F +G CSCGD+W
Sbjct: 718 ITGRDILVRDAVRFHKFSDGVCSCGDFW 745
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 143/289 (49%), Gaps = 12/289 (4%)
Query: 24 EGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCS 83
E ++ +M R+ I W T++ G QNGL + L+ + MR G D+ TF S++++C
Sbjct: 224 EARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACG 283
Query: 84 ELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSS 143
L+ L QG+QIHA +++ +V V S+L+ MYS+C + + F +++ W++
Sbjct: 284 ALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTA 343
Query: 144 MIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKY 203
+I YG +G EEA+ +F +M++ + +D T S++ +C++ E+G +F L +
Sbjct: 344 LIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVS- 402
Query: 204 RRKPRLEHYTCV----VDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDM 259
L HY V V L G+CG +++A L M + + W L+S
Sbjct: 403 ----GLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFH-DQVSWTALVSGYAQFGRAKE 457
Query: 260 AGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNV 306
+ E++L GV P +LS + +G S F ++ +
Sbjct: 458 TIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGI 506
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 136/315 (43%), Gaps = 44/315 (13%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV--G 67
S+LAH + L + E + M R+++++ +IAG + G + Y +
Sbjct: 80 STLAHARL----LSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALLQADSS 135
Query: 68 FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV 127
RP +IT +++ + S L G+Q H ++++ G + V S L+ MY++ + D+
Sbjct: 136 VRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAK 195
Query: 128 KTFLECEYSDVVL-------------------------------WSSMIAAYGFHGKGEE 156
+ F E + +VV+ W++M+ + +G E
Sbjct: 196 RAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESE 255
Query: 157 AINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVV 216
A+ +F +M + + TF S+L AC E+G + +++ R + + +V
Sbjct: 256 ALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRT-RYDDNVFVGSALV 314
Query: 217 DLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQD 274
D+ +C + A + R M K N I W L+ + ++ A R+ E+ G++P D
Sbjct: 315 DMYSKCRSIKLAETVFRRMTCK-NIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDD 373
Query: 275 AAPYVLLSNIHASAK 289
Y L S I + A
Sbjct: 374 ---YTLGSVISSCAN 385
>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Glycine max]
Length = 635
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 179/439 (40%), Positives = 269/439 (61%), Gaps = 14/439 (3%)
Query: 6 LVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRM 65
++ +++ YMK G + E++ + M +R ++ W +IAG +NG AED L + M
Sbjct: 197 VITWTAMITGYMKFGRVELAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLE 256
Query: 66 VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD 125
G +P+ ++ SV+ CS L+ L G+Q+H V K S D +SL+SMYS+CG L D
Sbjct: 257 TGVKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKD 316
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
+ + F++ DVV W++MI+ Y HG G++A+ LF++M+++ + + +TFV++L AC+H
Sbjct: 317 AWELFIQIPRKDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNH 376
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
GL + G+++F+ M + + + + EHY C+VDLLGR G L EA LI++MP K + I+
Sbjct: 377 AGLVDLGVQYFNTMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDLIKSMPFKPHPAIYG 436
Query: 246 TLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERN 305
TLL AC+ HK+ ++A A+ +L ++P A YV L+N++A+ RW V+ R +M++ N
Sbjct: 437 TLLGACRIHKNLNLAEFAAKNLLELDPTIATGYVQLANVYAAQNRWDHVASIRRSMKDNN 496
Query: 306 VKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMD 365
V K PG SW+EI + VH F D+ HP I L++L +MKL GYVPD +HD+
Sbjct: 497 VVKIPGYSWIEINSVVHGFRSSDRLHPELASIHEKLKDLEKKMKLAGYVPDLEFVLHDVG 556
Query: 366 SEEKEYNLKHHSEKLAIAFAEHTRGLIVML--------------PFKYISEIKNREIIVR 411
E KE L HSEKLAIAF L V + KYIS I+ REIIVR
Sbjct: 557 EELKEQLLLWHSEKLAIAFGLLKVPLGVPIRVFKNLRVCGDCHSATKYISTIEGREIIVR 616
Query: 412 DASRFHHFRNGKCSCGDYW 430
D +RFHHF++G CSC DYW
Sbjct: 617 DTTRFHHFKDGFCSCRDYW 635
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 134/288 (46%), Gaps = 26/288 (9%)
Query: 32 MPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDK--ITFVSVIS---SCSELA 86
MP+++V +W T+I+ AQ GL + ++ M P+K +++ +++S +C +L
Sbjct: 130 MPLKDVASWNTMISALAQVGLMGEARRLFSAM------PEKNCVSWSAMVSGYVACGDL- 182
Query: 87 TLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIA 146
E A V +++I+ Y + G ++ + + F E +V W++MIA
Sbjct: 183 ------DAAVECFYAAPMRSVITWTAMITGYMKFGRVELAERLFQEMSMRTLVTWNAMIA 236
Query: 147 AYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRK 206
Y +G+ E+ + LF M + + N ++ S+L CS+ + G + L V K
Sbjct: 237 GYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSALQLGKQVHQL-VCKCPLS 295
Query: 207 PRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEE 266
T +V + +CG L +A L +P K + + W ++S H + A R+ +E
Sbjct: 296 SDTTAGTSLVSMYSKCGDLKDAWELFIQIPRK-DVVCWNAMISGYAQHGAGKKALRLFDE 354
Query: 267 IL--GVNPQDAAPY--VLLSNIHASAKRWQGVSEFREAMRERNVKKEP 310
+ G+ P D + VLL+ HA GV F R+ ++ +P
Sbjct: 355 MKKEGLKP-DWITFVAVLLACNHAGLVD-LGVQYFNTMRRDFGIETKP 400
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 33/179 (18%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D AG+SL MY K G L + ++ +P ++V+ W +I+G AQ+G + L ++ M+
Sbjct: 297 DTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYAQHGAGKKALRLFDEMK 356
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G +PD ITFV+V+ +C+ HA +V D+GV Y D
Sbjct: 357 KEGLKPDWITFVAVLLACN-----------HAGLV------DLGV------QYFNTMRRD 393
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
++T E ++ M+ G GK EA++L + M F+ + + +LL AC
Sbjct: 394 FGIETKPE-------HYACMVDLLGRAGKLSEAVDLIKSM---PFKPHPAIYGTLLGAC 442
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 75/147 (51%), Gaps = 17/147 (11%)
Query: 109 VISS--LISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFH-GKGEEAINLFEQME 165
VI+S LI+ Y RCG +D +V+ F + + V W+S++AA+ G E A LFE++
Sbjct: 41 VIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQLFEKIP 100
Query: 166 QKEFEANDVTFVSLLYAC--SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCG 223
Q N V++ +++ AC H G+ + FFD M K + + ++ L + G
Sbjct: 101 Q----PNTVSY-NIMLACHWHHLGVHD-ARGFFDSMPLK-----DVASWNTMISALAQVG 149
Query: 224 YLDEAAALIRNMPVKANAIIWKTLLSA 250
+ EA L MP K N + W ++S
Sbjct: 150 LMGEARRLFSAMPEK-NCVSWSAMVSG 175
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 181/438 (41%), Positives = 275/438 (62%), Gaps = 25/438 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+V G++L +MY K G + V +P ++ I+W TL+ G QNGLA + +D YN+M
Sbjct: 358 DVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMME 417
Query: 65 MV-GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
P++ T+VS+I + S + L QG +IHA+++K LDV V + LI +Y +CG L
Sbjct: 418 ECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRL 477
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
+D++ F E V W+++IA+ G HG+GEEA+ LF+ M + +A+ +TFVSLL AC
Sbjct: 478 EDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSAC 537
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
SH GL ++G + FD+M K+Y KP L+HY C+VDLLGR GYL++A L+RNMP++ +A I
Sbjct: 538 SHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASI 597
Query: 244 WKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
W LLSACK + + ++ ++ +L V+ ++ YVLLSNI+A+ ++W+GV + R R+
Sbjct: 598 WGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARD 657
Query: 304 RNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHD 363
R ++K PG S + + ++ F G+++HP+ EI L+ L+++MK GYVPD D
Sbjct: 658 RGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSLGYVPDYSFVYQD 717
Query: 364 MDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIK 404
++ +EKE L HSE+LAIAF G+I P KYIS I
Sbjct: 718 IEEDEKEQILNSHSERLAIAF-----GIISTPPRSPIRIFKNLRVCGDCHNATKYISRIS 772
Query: 405 NREIIVRDASRFHHFRNG 422
REI+VRD++RFHHF++G
Sbjct: 773 EREIVVRDSNRFHHFKDG 790
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 126/250 (50%), Gaps = 1/250 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE D+ +SL H+Y + G L KV MP+++V +W +I+G QNG A L
Sbjct: 151 GFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVL 210
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
N M+ G + D IT S++ C++ + G IH V+K G DV V ++LI+MYS+
Sbjct: 211 NRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKF 270
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L D+ F + E D+V W+S+IAAY + A+ F+ M+ + +T VSL
Sbjct: 271 GRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLT 330
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
S + ++++ + +V++ + GY++ A + +P K +
Sbjct: 331 SIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRK-D 389
Query: 241 AIIWKTLLSA 250
I W TL++
Sbjct: 390 TISWNTLVTG 399
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 141/292 (48%), Gaps = 12/292 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G ++V + L ++Y+ G + + +N+ +W ++I+ + G + ++
Sbjct: 49 GKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCV 108
Query: 61 N-LMRMVG---FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISM 116
N L M G RPD TF ++ +C +L G+++H V K G DV V +SL+ +
Sbjct: 109 NQLFSMCGGGHLRPDFYTFPPILKAC---VSLVDGKKVHCCVFKMGFEDDVFVAASLVHL 165
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
YSR G LD + K F++ DV W++MI+ + +G A+ + +M+ + + + +T
Sbjct: 166 YSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITV 225
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
S+L C+ G+ L V K+ + ++++ + G L +A + M
Sbjct: 226 ASILPVCAQSDDVINGV-LIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQME 284
Query: 237 VKANAIIWKTLLSACKTHKSTDMAGRIAE--EILGVNPQDAAPYVLLSNIHA 286
V+ + + W ++++A + + A R + ++ G+ P D V L++I +
Sbjct: 285 VR-DLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRP-DLLTVVSLTSIFS 334
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 87/200 (43%), Gaps = 29/200 (14%)
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
F ++ +SC + +++HA ++ G S ++ + + LI++Y G + S TF
Sbjct: 25 FNALFNSC---VNVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIH 81
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAIN----LFEQMEQKEFEANDVTFVSLLYAC------- 183
++ W+S+I+AY GK EA+N LF + TF +L AC
Sbjct: 82 KKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVDGK 141
Query: 184 -SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
HC + + G E D+ V +V L R G LD A + +MPVK +
Sbjct: 142 KVHCCVFKMGFE-DDVFVA-----------ASLVHLYSRYGVLDVAHKVFVDMPVK-DVG 188
Query: 243 IWKTLLSA-CKTHKSTDMAG 261
W ++S C+ + G
Sbjct: 189 SWNAMISGFCQNGNAAGALG 208
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 68/154 (44%), Gaps = 2/154 (1%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
LD+ + L +Y K G L + + +P + W +IA +G E+ L + M
Sbjct: 459 LDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDM 518
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSRCGC 122
+ D ITFVS++S+CS + +GQ+ + K G + ++ + R G
Sbjct: 519 LAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGY 578
Query: 123 LDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGE 155
L+ + + D +W ++++A +G E
Sbjct: 579 LEKAYELVRNMPIQPDASIWGALLSACKIYGNAE 612
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 176/449 (39%), Positives = 265/449 (59%), Gaps = 24/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ D+ ++L ++Y + G E + R + ++ I W LI+G Q+ L E L +
Sbjct: 477 GYAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVF 536
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G + + TF+S IS+ + LA + QG+Q+H VK G + + V ++LIS+Y +C
Sbjct: 537 MKMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKC 596
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++D+ F E + V W+++I + HG+G EA++LF+QM+Q+ + NDVTF+ +L
Sbjct: 597 GSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVL 656
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL E+G+ +F M Y P +HY CVVD+LGR G LD A + MP+ AN
Sbjct: 657 AACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITAN 716
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A+IW+TLLSACK HK+ ++ A+ +L + P D+A YVLLSN +A +W + R+
Sbjct: 717 AMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKM 776
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M++R ++KEPG SW+E+KN VH F +GD+ HP S +I +L EL + GY +
Sbjct: 777 MKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDRLSKIGYKQENPNL 836
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
H+ + E+K+ HSEKLA+AF GL+ + P K+ S
Sbjct: 837 FHEKEQEQKDPTAFVHSEKLAVAF-----GLMTLPPCIPLRVIKNLRVCDDCHSWMKFTS 891
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
E+ REI++RD RFHHF +G CSCGDYW
Sbjct: 892 EVTRREIVLRDVYRFHHFNSGSCSCGDYW 920
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 158/302 (52%), Gaps = 8/302 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE D+ L MY K L + K++ ++ R+V++W ++IAG Q+ E+ L +
Sbjct: 376 GFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATF 435
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G PD I S S+C+ + + QG QIHA V +G + D+ + ++L+++Y+RC
Sbjct: 436 KEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARC 495
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +++ F E ++ D + W+ +I+ +G E+A+ +F +M Q + N TF+S +
Sbjct: 496 GRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAI 555
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
A ++ ++G + VK E ++ L G+CG +++A + M ++ N
Sbjct: 556 SALANLADIKQGKQVHGRAVKT-GHTSETEVANALISLYGKCGSIEDAKMIFSEMSLR-N 613
Query: 241 AIIWKTLLSACKTH----KSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSE 296
+ W T++++C H ++ D+ ++ +E G+ P D +L+ +G+S
Sbjct: 614 EVSWNTIITSCSQHGRGLEALDLFDQMKQE--GLKPNDVTFIGVLAACSHVGLVEEGLSY 671
Query: 297 FR 298
F+
Sbjct: 672 FK 673
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 149/302 (49%), Gaps = 7/302 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
F + G++L +Y+ GS E+V M + + + TLI+G AQ G E L +
Sbjct: 174 AFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIF 233
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M++ G RPD +T S++++C+ + L +G+Q+H+ ++KAG S D SL+ +Y +C
Sbjct: 234 DEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKC 293
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ + F + ++VVLW+ M+ AYG ++ +F QM+ N T+ +L
Sbjct: 294 GDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCIL 353
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
C+ G E G + L +K + + ++D+ + LD+A ++ M K +
Sbjct: 354 RTCTCTGQIELGEQIHSLSIKN-GFESDMYVSGVLIDMYSKYRCLDKARKILE-MLEKRD 411
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+ W ++++ H + A +E+ QD + + ++A G+ R+
Sbjct: 412 VVSWTSMIAGYVQHDFCEEALATFKEM-----QDCGVWPDNIGLASAASACAGIKAMRQG 466
Query: 301 MR 302
++
Sbjct: 467 LQ 468
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 141/277 (50%), Gaps = 8/277 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D + G+ L +Y K+G + + +V + + R+ ++W+ +++G AQ GL ++ Y
Sbjct: 73 GLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLY 132
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M P SV+S+C++ QG+ IHA+V K + V ++LI++Y
Sbjct: 133 SQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGF 192
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + F + + D V ++++I+ + G GE A+ +F++M+ + VT SLL
Sbjct: 193 GSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLL 252
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+ G +KG + ++K + + ++DL +CG + E A I N+ + N
Sbjct: 253 AACASVGDLQKGKQLHSYLLKAGMSFDYITEGS-LLDLYVKCGDI-ETAHDIFNLGDRTN 310
Query: 241 AIIWKTLLSA----CKTHKSTDMAGRIAEEILGVNPQ 273
++W +L A KS ++ G++ + G++P
Sbjct: 311 VVLWNLMLVAYGQISDLAKSFEIFGQM--QATGIHPN 345
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 117/251 (46%), Gaps = 4/251 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D + SL +Y+K G + + L NV+ W ++ Q + +
Sbjct: 275 GMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIF 334
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G P+K T+ ++ +C+ + G+QIH+ +K G D+ V LI MYS+
Sbjct: 335 GQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKY 394
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
CLD + K E DVV W+SMIA Y H EEA+ F++M+ +++ S
Sbjct: 395 RCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAA 454
Query: 181 YACSHCGLKEKGMEFF-DLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
AC+ +G++ + V Y + + +V+L RCG +EA +L R + K
Sbjct: 455 SACAGIKAMRQGLQIHARVYVSGY--AADISIWNTLVNLYARCGRSEEAFSLFREIDHK- 511
Query: 240 NAIIWKTLLSA 250
+ I W L+S
Sbjct: 512 DEITWNGLISG 522
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 6/118 (5%)
Query: 81 SCSELATLGQGQ------QIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
+C+ A G+G +IHA V G D + + LI +Y++ G + + + F E
Sbjct: 46 TCALQACRGRGNRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELS 105
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKG 192
D V W +M++ Y G G+EA L+ QM S+L AC+ L +G
Sbjct: 106 SRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQG 163
>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330 [Vitis vinifera]
Length = 1008
Score = 351 bits (901), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 176/455 (38%), Positives = 263/455 (57%), Gaps = 39/455 (8%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMP---------------IRNVIAWITLIAGKAQNGLAE 54
+SL MY K G + + + + +P + ++W ++++G QNG E
Sbjct: 559 NSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFE 618
Query: 55 DVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLI 114
D L ++ M DK T SV+S+C+ L G+Q+H + K G LDV + SS+I
Sbjct: 619 DALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSII 678
Query: 115 SMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDV 174
MY +CG L+D+ F + + +VVLW+SMI+ HG+G EA+ LFE M + N+V
Sbjct: 679 DMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEV 738
Query: 175 TFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRN 234
+FV +L ACSH GL E+G ++F LM + Y +P EH+TC+VDL GR G L+E I N
Sbjct: 739 SFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMVDLYGRAGRLNEIKEFIHN 798
Query: 235 MPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGV 294
+ + +W++ LS+C+ HK+ +M + +++L + P DA PY+L S+I A+ RW+
Sbjct: 799 NAISKLSSVWRSFLSSCRVHKNIEMGIWVCKKLLELEPFDAGPYILFSSICATEHRWEEA 858
Query: 295 SEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYV 354
++ R M++R VKK P SW+++KNQVH F MGD+SHP+ +I YL+EL +K GY
Sbjct: 859 AKIRSLMQQRGVKKNPSQSWIQLKNQVHSFVMGDRSHPQDTKIYSYLDELIGRLKEIGYS 918
Query: 355 PDTGADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP------------------ 396
D M D++ E+++ L +HSEKLAIA+ G+I P
Sbjct: 919 TDVTPVMQDVEQEQRQVLLGYHSEKLAIAY-----GIISTAPGTPIRVMKNLRVCIDCHN 973
Query: 397 -FKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
KY SE+ REII+RD RFHHF++G CSC DYW
Sbjct: 974 FIKYASELLGREIIIRDIHRFHHFKHGHCSCADYW 1008
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 154/318 (48%), Gaps = 20/318 (6%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E D V+ + + Y++ G + + + R +P ++ +W T+I G +NG L+
Sbjct: 451 EKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALELLYK 510
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M G +K+TF + S L+ LG G+QIH +V+K G D V +SLI MY +CG
Sbjct: 511 MVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGE 570
Query: 123 LDDSVKTFL-------------ECEYSDV--VLWSSMIAAYGFHGKGEEAINLFEQMEQK 167
++ + F C+ + V V WSSM++ Y +G+ E+A+ F M
Sbjct: 571 MEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMICS 630
Query: 168 EFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDE 227
+ E + T S++ AC+ G+ E G + ++K + + ++D+ +CG L++
Sbjct: 631 QVEVDKFTLTSVVSACASAGVLELGRQVHG-YIQKIGHGLDVFLGSSIIDMYVKCGSLND 689
Query: 228 AAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIH 285
A LI N N ++W +++S C H A R+ E ++ G+ P + + +L+
Sbjct: 690 -AWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTACS 748
Query: 286 ASAKRWQGVSEFREAMRE 303
+ +G FR MRE
Sbjct: 749 HAGLLEEGCKYFR-LMRE 765
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 89/163 (54%), Gaps = 1/163 (0%)
Query: 7 VAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV 66
+ G+ L ++Y KS +L + K+ +P +V +W LI+G A+ GL+ DVL + M+
Sbjct: 322 IRGNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQ 381
Query: 67 GFRPDKITFVSVISSCSELATLGQ-GQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD 125
G P++ T V+ SCS + G+ IH +++ G LD + +S++ Y +C C
Sbjct: 382 GVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGY 441
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE 168
+ K F D V W+ M+++Y G +++++LF Q+ K+
Sbjct: 442 AEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKD 484
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 97/193 (50%), Gaps = 13/193 (6%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G LD+ GSS+ MY+K GSL + + RNV+ W ++I+G A +G + + +
Sbjct: 666 GHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLF 725
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQ---IHAEV--VKAGASLDVGVISSLIS 115
LM G P++++FV V+++CS L +G + + EV ++ GA + ++
Sbjct: 726 ELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEH----FTCMVD 781
Query: 116 MYSRCGCLDDSVKTFLECEYSDVV--LWSSMIAAYGFHGKGEEAINLFEQ-MEQKEFEAN 172
+Y R G L++ +K F+ + +W S +++ H E I + ++ +E + F+A
Sbjct: 782 LYGRAGRLNE-IKEFIHNNAISKLSSVWRSFLSSCRVHKNIEMGIWVCKKLLELEPFDAG 840
Query: 173 DVTFVSLLYACSH 185
S + A H
Sbjct: 841 PYILFSSICATEH 853
>gi|297743264|emb|CBI36131.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 351 bits (901), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 184/447 (41%), Positives = 262/447 (58%), Gaps = 18/447 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D V + L ++Y SL + +P N+ W LI G A NG E + Y
Sbjct: 105 GFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLY 164
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G PD TF V+ +C+ L+ + G++IH VV+ G DV V ++LI MY++C
Sbjct: 165 YQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKC 224
Query: 121 GCLDDSVKTFLECEYSDVVL---WSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
GC+ + + F + D VL W++MI Y HG EA++LFE+M + + + +TFV
Sbjct: 225 GCVGSAREVFDKILVRDAVLVVSWNAMITGYAMHGHATEALDLFEEMNRVA-KPDHITFV 283
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
+L ACSH GL E+G FF+ M++ Y+ P ++HYTC+VDLLG G LDEA LI M V
Sbjct: 284 GVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKV 343
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEF 297
++ +W LL++CK H + ++ E ++ + P DA YV+LSNI+A A +W+GV++
Sbjct: 344 LPDSGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKL 403
Query: 298 REAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDT 357
R+ M +R +KK SW+E+KN+VH F GD SHP S EI LE + MK GY P T
Sbjct: 404 RKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIYSELERVGGLMKEAGYSPST 463
Query: 358 GADMHDMDSEEKEYNLKHHSEKLAIAFA-----EHTRGLIVM---------LPFKYISEI 403
G+ HD++ +EK + HSE+LAIAF TR LI + K+IS+I
Sbjct: 464 GSVFHDVEDDEKANMVCSHSERLAIAFGLISTPPGTRLLITKNLRICEDCHVAIKFISKI 523
Query: 404 KNREIIVRDASRFHHFRNGKCSCGDYW 430
REI VRD +R+HHF++G CSCGDYW
Sbjct: 524 TEREITVRDVNRYHHFKDGVCSCGDYW 550
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 94/212 (44%), Gaps = 3/212 (1%)
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P + S++ SC + G+Q+HA+V AG D + + L+++Y C L +
Sbjct: 73 PTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLL 132
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F ++ LW+ +I Y ++G E A+ L+ QM ++ TF +L AC+
Sbjct: 133 FDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAI 192
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII--WKTL 247
E G E + +V+ K ++D+ +CG + A + + V+ ++ W +
Sbjct: 193 EHGREIHEHVVQTGWEKDVFVG-AALIDMYAKCGCVGSAREVFDKILVRDAVLVVSWNAM 251
Query: 248 LSACKTHKSTDMAGRIAEEILGVNPQDAAPYV 279
++ H A + EE+ V D +V
Sbjct: 252 ITGYAMHGHATEALDLFEEMNRVAKPDHITFV 283
>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Glycine max]
Length = 854
Score = 351 bits (901), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 180/444 (40%), Positives = 264/444 (59%), Gaps = 16/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E D+ S+L +Y K G L+E KV R M + + W ++IA AQ+ ++ L Y
Sbjct: 413 GLESDVFVRSALIDVYSKMGELLEALKVFREMMTGDSVVWNSIIAAFAQHSDGDEALHLY 472
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
MR VGF D+ T SV+ +C+ L+ L G+Q H V+K L + ++L+ MY +C
Sbjct: 473 KSMRRVGFPADQSTLTSVLRACTSLSLLELGRQAHVHVLKFDQDLILN--NALLDMYCKC 530
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L+D+ F DV+ WS+MIA +G EA+NLFE M+ + + N +T + +L
Sbjct: 531 GSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNLFESMKVQGPKPNHITILGVL 590
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
+ACSH GL +G +F M Y P EHY C++DLLGR LD+ LI M + +
Sbjct: 591 FACSHAGLVNEGWYYFRSMNNLYGIDPGREHYGCMLDLLGRAEKLDDMVKLIHEMNCEPD 650
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+ W+TLL AC+ ++ D+A A+EIL ++PQD YVLLSNI+A +KRW V+E R
Sbjct: 651 VVTWRTLLDACRARQNVDLATYAAKEILKLDPQDTGAYVLLSNIYAISKRWNDVAEVRRT 710
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M++R ++KEPG SW+E+ Q+H F +GDKSHP+ EI+ L + + GYVPDT
Sbjct: 711 MKKRGIRKEPGCSWIEVNKQIHAFILGDKSHPQIDEINRQLNQFICRLAGAGYVPDTNFV 770
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA------EHTRGLIVMLPF--------KYISEIKNR 406
+ D++ E++E +L++HSEKLAI F E T + L K I+E++ R
Sbjct: 771 LQDLEGEQREDSLRYHSEKLAIVFGIMSFPKEKTIRIWKNLKICGDCHKFAKLIAELEQR 830
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
I++RD R+HHF++G CSCGDYW
Sbjct: 831 HIVIRDPIRYHHFQDGVCSCGDYW 854
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 135/250 (54%), Gaps = 7/250 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ + L +MY+K L E + + MP RNV++W T+I+ + L + +
Sbjct: 315 GYHPKTFLTNILINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLL 374
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G P+ TF SV+ +C L L +Q+H+ ++K G DV V S+LI +YS+
Sbjct: 375 AFMFRDGVMPNMFTFSSVLRACERLYDL---KQLHSWIMKVGLESDVFVRSALIDVYSKM 431
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L +++K F E D V+W+S+IAA+ H G+EA++L++ M + F A+ T S+L
Sbjct: 432 GELLEALKVFREMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVL 491
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+ L E G + + V K+ + L + ++D+ +CG L++A + M K +
Sbjct: 492 RACTSLSLLELGRQ-AHVHVLKFDQDLILNN--ALLDMYCKCGSLEDAKFIFNRM-AKKD 547
Query: 241 AIIWKTLLSA 250
I W T+++
Sbjct: 548 VISWSTMIAG 557
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 53 AEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISS 112
A VLD M G D IT+ +I C + +G+++H + G + +
Sbjct: 269 AMHVLDS---MERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNI 325
Query: 113 LISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEAN 172
LI+MY + L+++ F + +VV W++MI+AY + A+ L M + N
Sbjct: 326 LINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPN 385
Query: 173 DVTFVSLLYACS--------HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGY 224
TF S+L AC H + + G+E D+ V+ + ++D+ + G
Sbjct: 386 MFTFSSVLRACERLYDLKQLHSWIMKVGLE-SDVFVR-----------SALIDVYSKMGE 433
Query: 225 LDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMA 260
L EA + R M + ++++W ++++A H D A
Sbjct: 434 LLEALKVFREM-MTGDSVVWNSIIAAFAQHSDGDEA 468
>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
gi|238013832|gb|ACR37951.1| unknown [Zea mays]
gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
Length = 745
Score = 351 bits (901), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 180/448 (40%), Positives = 265/448 (59%), Gaps = 24/448 (5%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
++ ++ GS+L MY K S+ E R M +N+I+W LI G QNG +E+ + ++
Sbjct: 303 YDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFS 362
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M+ G PD T SVISSC+ LA+L +G Q H + +G + V ++L+++Y +CG
Sbjct: 363 EMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCG 422
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
++D+ + F E + D V W++++ Y G+ +E I+LFE+M K+ + + VTF+ +L
Sbjct: 423 SIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLS 482
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
ACS G EKG +F M K + P +HYTC++DL R G L EA I+ MP+ +A
Sbjct: 483 ACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDA 542
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
I W TLLSAC+ ++ AE +L ++PQ+ A YVLL ++HA+ W V++ R M
Sbjct: 543 IGWGTLLSACRLRGDMEIGQWAAENLLEIDPQNPASYVLLCSMHATKGNWNQVAQLRRGM 602
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
R+R VKKEPG SW++ KN+VH F+ D+SHP S I LE L S+M GY PD + +
Sbjct: 603 RDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSKGIYEKLEWLNSKMLEEGYKPDVSSVL 662
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVM---LPF----------------KYISE 402
HD+ +K + + HHSEKLAIAF GL+ + +P K IS+
Sbjct: 663 HDVADTDKVHMVSHHSEKLAIAF-----GLMFVPHEMPIRIVKNLRVCVDCHNATKLISK 717
Query: 403 IKNREIIVRDASRFHHFRNGKCSCGDYW 430
I R+I+VRDA RFH F NG CSCGD+W
Sbjct: 718 ITGRDILVRDAVRFHKFSNGVCSCGDFW 745
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 124/231 (53%), Gaps = 10/231 (4%)
Query: 24 EGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCS 83
E ++ +M R+ I W T++ G QNGL L+ + MR G D+ TF S++++C
Sbjct: 224 EARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACG 283
Query: 84 ELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSS 143
L+ L QG+QIHA +++ +V V S+L+ MYS+C + + F +++ W++
Sbjct: 284 ALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTA 343
Query: 144 MIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKY 203
+I YG +G EEA+ +F +M++ + +D T S++ +C++ E+G +F L +
Sbjct: 344 LIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCLALVS- 402
Query: 204 RRKPRLEHYTCV----VDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
L HY V V L G+CG +++A L M + + + W L++
Sbjct: 403 ----GLMHYITVSNALVTLYGKCGSIEDAHRLFDEM-LFHDQVSWTALVTG 448
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 132/307 (42%), Gaps = 55/307 (17%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVG-- 67
S+LAH + L + + + M R+ +++ +IAG + G + Y+ + G
Sbjct: 80 STLAHARL----LDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLLRAGSS 135
Query: 68 FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV 127
RP +IT +++ + S L G+Q H ++++ G ++ V S L+ MY++ G + D+
Sbjct: 136 VRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAK 195
Query: 128 KTFLECEYSDVVL-------------------------------WSSMIAAYGFHGKGEE 156
+ F E + +VV+ W++M+ + +G +
Sbjct: 196 RVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQ 255
Query: 157 AINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY---- 212
A+N F +M + + TF S+L AC E+G + +++ HY
Sbjct: 256 ALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRT--------HYDDNV 307
Query: 213 ---TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL- 268
+ +VD+ +C + A R M K N I W L+ + ++ A R+ E+
Sbjct: 308 FVGSALVDMYSKCRSIKPAETAFRRMSCK-NIISWTALIVGYGQNGCSEEAVRVFSEMQR 366
Query: 269 -GVNPQD 274
G++P D
Sbjct: 367 DGIDPDD 373
>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1274
Score = 351 bits (900), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 184/444 (41%), Positives = 265/444 (59%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G DL A +SL MY K+G + E + +++ I++ L++G QNG AE+ +
Sbjct: 337 GIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVF 396
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ PD T VS+I +CS LA L G+ H V+ G +L+ + +SLI MY++C
Sbjct: 397 KKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKC 456
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +D S + F + DVV W++MIA YG HG G+EA LF M+ + F +DVTF+ L+
Sbjct: 457 GKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLI 516
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL +G +FD M KY PR+EHY C+VDLL R G LDEA I++MP+KA+
Sbjct: 517 AACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKAD 576
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+W LL AC+ HK+ D+ +++ I + P+ +VLLSNI ++A R+ +E R
Sbjct: 577 VRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRII 636
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
+ + KK PG SW+EI +H F GD+SHP S +I L+ + ++K GY DT
Sbjct: 637 QKVKGFKKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKLGYQADTSFV 696
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEH----------TRGLIVM----LPFKYISEIKNR 406
+ D++ EEKE L +HSEKLAIAF T+ L V KY++ ++NR
Sbjct: 697 LQDLEEEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNR 756
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
IIVRD +RFHHF+NG+CSCG++W
Sbjct: 757 TIIVRDTNRFHHFKNGQCSCGNFW 780
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 138/283 (48%), Gaps = 20/283 (7%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E ++ G++L MY K LV +V MP+RN + W LI G L + + + +NL
Sbjct: 237 EEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFV---LCDRMTEAFNL 293
Query: 63 MRMVGFRPDKITFVSVISS------CSELATLGQGQQIHAEVVKAGASLDVGVISSLISM 116
+ + + F+S S C+ LA L G Q+HA + K+G D+ +SL+SM
Sbjct: 294 FK--DMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSM 351
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
Y++ G ++++ F E D + + ++++ +GK EEA +F++M+ E + T
Sbjct: 352 YAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATM 411
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC--VVDLLGRCGYLDEAAALIRN 234
VSL+ ACSH + G ++ R LE C ++D+ +CG +D + +
Sbjct: 412 VSLIPACSHLAALQHGKCSHGSVII---RGLALETSICNSLIDMYAKCGKIDLSRQVFDK 468
Query: 235 MPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAP 277
MP + + + W T+++ H A + LG+ Q AP
Sbjct: 469 MPAR-DVVSWNTMIAGYGIHGLGKEATTL---FLGMKNQGFAP 507
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 104/241 (43%), Gaps = 14/241 (5%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
++ G L +V +P + A+ LI + G +D Y M P+K TF
Sbjct: 44 HISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTF 103
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
V+ +CS L L G+ IHA AG D+ V ++LI +Y RC + F +
Sbjct: 104 PFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPM 163
Query: 136 SDVVLWSSMIAAYGFHGKGEEAI-NLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGME 194
DVV W++M+A Y HG AI +L + + N T VSLL L + G
Sbjct: 164 RDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPL-----LAQHGAL 218
Query: 195 FFDLMVKKYRRKPRLEHY-------TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTL 247
F + Y + LE T ++D+ +C L A + MPV+ N + W L
Sbjct: 219 FQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVR-NDVTWSAL 277
Query: 248 L 248
+
Sbjct: 278 I 278
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 115/256 (44%), Gaps = 7/256 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQ- 59
G DL ++L +Y++ V MP+R+V+AW ++AG A +G+ +
Sbjct: 130 GLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHL 189
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLD---VGVISSLISM 116
++ G RP+ T VS++ ++ L QG IHA ++A + V + ++L+ M
Sbjct: 190 LDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDM 249
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
Y++C L + + F + V WS++I + + EA NLF+ M + T
Sbjct: 250 YAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATS 309
Query: 177 V-SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM 235
V S L C+ G + L+ K L ++ + + G ++EA +
Sbjct: 310 VASALRVCASLADLHMGTQLHALIAKSGIHAD-LTASNSLLSMYAKAGLINEATMFFDEI 368
Query: 236 PVKANAIIWKTLLSAC 251
VK + I + LLS C
Sbjct: 369 AVK-DTISYGALLSGC 383
>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 350 bits (899), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 174/444 (39%), Positives = 270/444 (60%), Gaps = 16/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + D+ S+L +Y + G L +V M +++ W ++IAG AQN ++ L +
Sbjct: 93 GLDSDVFVRSALIDVYSRWGELENALRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLF 152
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ GF + T SV+ +C+ LA L G+Q+H V+K L + ++L+ MY +C
Sbjct: 153 KRMKRAGFLAQQTTLTSVLRACTGLALLELGRQVHVHVLKYDQDLILN--NALLDMYCKC 210
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L+D+ F+ DV+ WS+MIA +G +EA+ LFE M+ + N VT V +L
Sbjct: 211 GSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVL 270
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
+ACSH GL E+G+ +F M + + P EHY C++DLLGR G L EA LI M + +
Sbjct: 271 FACSHAGLVEEGLYYFHSMKELFGIDPGREHYGCMIDLLGRAGRLSEAVDLINEMECEPD 330
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A+ W+ LL+AC+ H++ D+A A++IL ++PQDA YVLLSNI+A+ +RW V+E R
Sbjct: 331 AVTWRALLNACRVHRNVDVAIHAAKQILRLDPQDAGTYVLLSNIYANTQRWNDVAEVRRT 390
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M R +KKEPG SW+E+ Q+H F +GD+SHP+ EI++ L +L ++ GYVPDT
Sbjct: 391 MTNRGIKKEPGCSWIEVSKQIHAFILGDRSHPQIREINIQLNQLIYKLMGVGYVPDTNFV 450
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHT--RGLIVM------------LPFKYISEIKNR 406
+ D++ E+ + +L++HSEKLAI F + RG + L K +++++ R
Sbjct: 451 LQDLEGEQMQDSLRYHSEKLAIVFGLMSLPRGQTIRIRKNLRICGDCHLFTKLLAKMEQR 510
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
I++RD R+HHF++G CSCGD+W
Sbjct: 511 IIVIRDPVRYHHFQDGLCSCGDFW 534
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 88/264 (33%), Positives = 150/264 (56%), Gaps = 9/264 (3%)
Query: 12 LAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPD 71
L +MY+K G L + + V MP RNV++W T+I+ + L + L+ LM G RP+
Sbjct: 6 LINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVRPN 65
Query: 72 KITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFL 131
T+ SV+ +C L L +Q+H ++K G DV V S+LI +YSR G L+++++ F
Sbjct: 66 MFTYSSVLRACDGLFNL---RQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFD 122
Query: 132 ECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEK 191
E D+V+WSS+IA + + G+EA+ LF++M++ F A T S+L AC+ L E
Sbjct: 123 EMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLEL 182
Query: 192 GMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSAC 251
G + + V KY + L + ++D+ +CG L++A A+ M V+ + I W T+++
Sbjct: 183 GRQ-VHVHVLKYDQDLILNN--ALLDMYCKCGSLEDANAVFVRM-VEKDVISWSTMIAGL 238
Query: 252 KTHKSTDMAGRIAE--EILGVNPQ 273
+ + A ++ E ++LG+ P
Sbjct: 239 AQNGYSKEALKLFESMKVLGIKPN 262
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 78/163 (47%), Gaps = 21/163 (12%)
Query: 109 VISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE 168
+I+ LI+MY + G L D+ F + +VV W++MI+AY ++A+ M ++
Sbjct: 2 LINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREG 61
Query: 169 FEANDVTFVSLLYACS--------HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLG 220
N T+ S+L AC HC + + G++ D+ V+ + ++D+
Sbjct: 62 VRPNMFTYSSVLRACDGLFNLRQLHCCIIKIGLD-SDVFVR-----------SALIDVYS 109
Query: 221 RCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRI 263
R G L+ A + M V + ++W ++++ + D A R+
Sbjct: 110 RWGELENALRVFDEM-VTGDLVVWSSIIAGFAQNSDGDEALRL 151
>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1174
Score = 350 bits (899), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 184/444 (41%), Positives = 265/444 (59%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G DL A +SL MY K+G + E + +++ I++ L++G QNG AE+ +
Sbjct: 337 GIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVF 396
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ PD T VS+I +CS LA L G+ H V+ G +L+ + +SLI MY++C
Sbjct: 397 KKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKC 456
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +D S + F + DVV W++MIA YG HG G+EA LF M+ + F +DVTF+ L+
Sbjct: 457 GKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLI 516
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL +G +FD M KY PR+EHY C+VDLL R G LDEA I++MP+KA+
Sbjct: 517 AACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKAD 576
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+W LL AC+ HK+ D+ +++ I + P+ +VLLSNI ++A R+ +E R
Sbjct: 577 VRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRII 636
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
+ + KK PG SW+EI +H F GD+SHP S +I L+ + ++K GY DT
Sbjct: 637 QKVKGFKKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKLGYQADTSFV 696
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEH----------TRGLIVM----LPFKYISEIKNR 406
+ D++ EEKE L +HSEKLAIAF T+ L V KY++ ++NR
Sbjct: 697 LQDLEEEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNR 756
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
IIVRD +RFHHF+NG+CSCG++W
Sbjct: 757 TIIVRDTNRFHHFKNGQCSCGNFW 780
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 138/283 (48%), Gaps = 20/283 (7%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E ++ G++L MY K LV +V MP+RN + W LI G L + + + +NL
Sbjct: 237 EEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFV---LCDRMTEAFNL 293
Query: 63 MRMVGFRPDKITFVSVISS------CSELATLGQGQQIHAEVVKAGASLDVGVISSLISM 116
+ + + F+S S C+ LA L G Q+HA + K+G D+ +SL+SM
Sbjct: 294 FK--DMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSM 351
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
Y++ G ++++ F E D + + ++++ +GK EEA +F++M+ E + T
Sbjct: 352 YAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATM 411
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC--VVDLLGRCGYLDEAAALIRN 234
VSL+ ACSH + G ++ R LE C ++D+ +CG +D + +
Sbjct: 412 VSLIPACSHLAALQHGKCSHGSVII---RGLALETSICNSLIDMYAKCGKIDLSRQVFDK 468
Query: 235 MPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAP 277
MP + + + W T+++ H A + LG+ Q AP
Sbjct: 469 MPAR-DVVSWNTMIAGYGIHGLGKEATTL---FLGMKNQGFAP 507
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 104/241 (43%), Gaps = 14/241 (5%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
++ G L +V +P + A+ LI + G +D Y M P+K TF
Sbjct: 44 HISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTF 103
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
V+ +CS L L G+ IHA AG D+ V ++LI +Y RC + F +
Sbjct: 104 PFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPM 163
Query: 136 SDVVLWSSMIAAYGFHGKGEEAI-NLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGME 194
DVV W++M+A Y HG AI +L + + N T VSLL L + G
Sbjct: 164 RDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPL-----LAQHGAL 218
Query: 195 FFDLMVKKYRRKPRLEHY-------TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTL 247
F + Y + LE T ++D+ +C L A + MPV+ N + W L
Sbjct: 219 FQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVR-NDVTWSAL 277
Query: 248 L 248
+
Sbjct: 278 I 278
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 115/256 (44%), Gaps = 7/256 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQ- 59
G DL ++L +Y++ V MP+R+V+AW ++AG A +G+ +
Sbjct: 130 GLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHL 189
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLD---VGVISSLISM 116
++ G RP+ T VS++ ++ L QG IHA ++A + V + ++L+ M
Sbjct: 190 LDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDM 249
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
Y++C L + + F + V WS++I + + EA NLF+ M + T
Sbjct: 250 YAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATS 309
Query: 177 V-SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM 235
V S L C+ G + L+ K L ++ + + G ++EA +
Sbjct: 310 VASALRVCASLADLHMGTQLHALIAKSGIHAD-LTASNSLLSMYAKAGLINEATMFFDEI 368
Query: 236 PVKANAIIWKTLLSAC 251
VK + I + LLS C
Sbjct: 369 AVK-DTISYGALLSGC 383
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 350 bits (898), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 176/444 (39%), Positives = 264/444 (59%), Gaps = 16/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E D+ S+L +Y K L V MP R+++ W ++I G AQN + L+ +
Sbjct: 182 GLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLF 241
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ GF D+ T SV+ +C+ LA L G+Q+H V+K L + ++LI MY +C
Sbjct: 242 KRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLKFDQDLILN--NALIDMYCKC 299
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L+D+ F DV+ WS+M+A +G +A+ LFE M++ N +T + +L
Sbjct: 300 GSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVL 359
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
+ACSH GL EKG +F M K + P EHY C++DLLGR G LDEA LI M + +
Sbjct: 360 FACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPD 419
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
++ W+TLL AC+ H++ D+A A++I+ + P+DA Y+LLSNI+A+ +RW+ V+E R+
Sbjct: 420 SVTWRTLLGACRVHRNVDLAIYAAKKIIELEPEDAGTYILLSNIYANTQRWEDVAEVRKT 479
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M R ++K PG SW+E+ Q+H F +GD SHP+ EI L +L + GYVPDT
Sbjct: 480 MTNRGIRKTPGCSWIEVDKQIHVFILGDTSHPKIEEIVQRLNDLIERVMGVGYVPDTNFV 539
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA------EHTRGLIVMLPF--------KYISEIKNR 406
+ D++ E+KE +L++HSEKLAI F E T + L K +S +++R
Sbjct: 540 LQDLEGEQKEDSLRYHSEKLAIMFGLMNLSREKTVRIRKNLRICGDCHVFAKVVSRMEHR 599
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
I++RD R+HHF++G CSCGDYW
Sbjct: 600 SIVIRDPIRYHHFQDGVCSCGDYW 623
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 140/250 (56%), Gaps = 8/250 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+E + ++L +MY+K L E E + MP RNV++W T+I+ + N L + L
Sbjct: 85 GYEPKMFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYS-NKLNDKALKCL 143
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
LM G RP+ T+ SV+ +C L L +Q+H ++K G DV V S+LI +YS+
Sbjct: 144 ILMFREGVRPNMFTYSSVLRACDGLPNL---RQLHCGIIKTGLESDVFVRSALIDVYSKW 200
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
LD+++ F E D+V+W+S+I + + G EA+NLF++M++ F A+ T S+L
Sbjct: 201 SDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVL 260
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+ L E G + + V K+ + L + ++D+ +CG L++A + M V+ +
Sbjct: 261 RACTGLALLELGRQVH-VHVLKFDQDLILNN--ALIDMYCKCGSLEDANSAFSRM-VEKD 316
Query: 241 AIIWKTLLSA 250
I W T+++
Sbjct: 317 VISWSTMVAG 326
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 94/192 (48%), Gaps = 22/192 (11%)
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
G D IT+ +I CS + +G+++H + G + V+++L++MY + L+++
Sbjct: 50 GVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEA 109
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS-- 184
F E +VV W++MI+AY + ++A+ M ++ N T+ S+L AC
Sbjct: 110 EDLFDEMPERNVVSWTTMISAYS-NKLNDKALKCLILMFREGVRPNMFTYSSVLRACDGL 168
Query: 185 ------HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
HCG+ + G+E D+ V+ + ++D+ + LD A + MP +
Sbjct: 169 PNLRQLHCGIIKTGLE-SDVFVR-----------SALIDVYSKWSDLDNALGVFDEMPTR 216
Query: 239 ANAIIWKTLLSA 250
+ ++W +++
Sbjct: 217 -DLVVWNSIIGG 227
>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
Length = 643
Score = 350 bits (898), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 180/444 (40%), Positives = 262/444 (59%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ D+ GSSL MY KV +P+R+ I W +L+AG AQNG E+ L +
Sbjct: 200 GFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEALGIF 259
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G RP +TF S+I C LA+L G+Q+HA V+ G +V + SSLI MY +C
Sbjct: 260 RRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDMYCKC 319
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + F + DVV W++MI Y HG EA+ LFE+ME + N +TF+++L
Sbjct: 320 GEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITFLAVL 379
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL +KG ++F M Y P LEH+ + D LGR G LDEA I M +K
Sbjct: 380 TACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISKMQIKPT 439
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A +W TLL AC+ HK+T +A +A++I+ + P+ +V+LSN+++++ RW + RE+
Sbjct: 440 ASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYSASGRWNEAAHLRES 499
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
MR++ +KK+P SW+E+K+++H F D+SHP I L + +M G+VP+T
Sbjct: 500 MRKKGMKKDPACSWIEVKSKLHVFVAHDRSHPWYDRIIDALNAFSEQMAREGHVPNTEDV 559
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA----------EHTRGLIVMLP----FKYISEIKNR 406
D++ E K Y L HSEKLAI F + L V + K+IS++ +R
Sbjct: 560 FQDIEEEHKSYVLCGHSEKLAIVFGIISTPAGTKIRVMKNLRVCIDCHTVTKFISKLADR 619
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EI+VRDA+RFHHF++G CSCGD+W
Sbjct: 620 EIVVRDANRFHHFKDGNCSCGDFW 643
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 83/159 (52%)
Query: 27 KVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELA 86
KV M R+V++W TL+ G A+ G + L M GFRPD T +V+ +E A
Sbjct: 125 KVFDEMIERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECA 184
Query: 87 TLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIA 146
+ +G ++H + G DV V SSLI MY+ C D SVK F D +LW+S++A
Sbjct: 185 DVKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLA 244
Query: 147 AYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
+G EEA+ +F +M Q VTF SL+ C +
Sbjct: 245 GCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGN 283
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 109/258 (42%), Gaps = 29/258 (11%)
Query: 40 WITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKI--TFVSVISSCSELATLGQGQQIHAE 97
W I A G D + + MR + + + + SC+ L G +HA
Sbjct: 16 WAQQIRAAAAEGHFCDAVSLFLRMRASAAPRSSVPASLPAALKSCAALGLSALGASLHAL 75
Query: 98 VVKAGASLDVGVISSLISMYSRCGC--LDDS-----------------VKTFLECEYSDV 138
+++GA D ++L+++Y + C LD + K F E DV
Sbjct: 76 AIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERDV 135
Query: 139 VLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDL 198
V W++++ G+ EA+ +M ++ F + T ++L + C ++G+E
Sbjct: 136 VSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHGF 195
Query: 199 MVKKYRRKPRLEHY--TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKS 256
+R + + + ++D+ C D + + N+PV+ + I+W +LL+ C + S
Sbjct: 196 ---AFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVR-DHILWNSLLAGCAQNGS 251
Query: 257 TDMAGRIAEEIL--GVNP 272
+ A I +L GV P
Sbjct: 252 VEEALGIFRRMLQAGVRP 269
>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 872
Score = 350 bits (898), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 172/445 (38%), Positives = 284/445 (63%), Gaps = 16/445 (3%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
+E G++L Y+K G + E KV + ++++AW ++AG AQ G E + ++
Sbjct: 428 YERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAGETEAAIKIFS 487
Query: 62 LMRMVGFRPDKITFVSVISSCS-ELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ G +P++ TF S+++ C+ A++GQG+Q H +K+ + V S+L++MY++
Sbjct: 488 ELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKK 547
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ + + F D+V W+SMI+ Y HG+ +A+++F++M++++ + + VTF+ +
Sbjct: 548 GHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDSVTFIGVF 607
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+H GL E+G ++FD+MV+ + P EH +C+VDL R G L++A +I NMP A
Sbjct: 608 AACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIDNMPNLAG 667
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+ IW+T+L+AC+ HK T++ AE+I+ + P+D+A YVLLSN++A + WQ ++ R+
Sbjct: 668 STIWRTILAACRVHKKTELGRLAAEKIIAMIPEDSAAYVLLSNMYAESGDWQERAKVRKL 727
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M ERNVKKEPG SW+E+KN+ + F GD+SHP +I + LE+L++ +K GY PDT
Sbjct: 728 MNERNVKKEPGYSWIEVKNKTYAFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYV 787
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA-----EHTRGLIVM---------LPFKYISEIKNR 406
+ D+D E KE L HSE+LAIAF + + LI+ + K I++I+ R
Sbjct: 788 LQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHVVIKLIAKIEER 847
Query: 407 EIIVRDASRFHHF-RNGKCSCGDYW 430
EI+VRD++RFHHF +G CSCGD+W
Sbjct: 848 EIVVRDSNRFHHFSSDGVCSCGDFW 872
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 142/297 (47%), Gaps = 13/297 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D+ G+SL YMK + +G V M RNV+ W TLI+G A+N L E+VL +
Sbjct: 127 GFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISGYARNSLNEEVLTLF 186
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G +P+ TF + + +E G+G Q+H VVK G + V +SLI++Y +C
Sbjct: 187 MRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKC 246
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + F + E VV W+SMI+ Y +G EA+ +F M ++ +F S++
Sbjct: 247 GNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRLSESSFASII 306
Query: 181 YACSHCGLKE-KGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
C++ LKE + E V KY T ++ +C + +A L +
Sbjct: 307 KLCAN--LKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRLFKETGFLG 364
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQD--------AAPYVLLSNIHA 286
N + W ++S + + A + E+ GV P + A P + S +HA
Sbjct: 365 NVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHA 421
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 130/260 (50%), Gaps = 16/260 (6%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMP-IRNVIAWITLIAGKAQNGLAEDVLDQ 59
GF D ++L Y K ++++ ++ + + NV++W +I+G QN E+ +
Sbjct: 329 GFVFDQNIRTALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGL 388
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
++ M+ G RP++ T+ ++++ ++ ++HA+VVK V ++L+ Y +
Sbjct: 389 FSEMKRKGVRPNEFTYSVILTALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVK 444
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G +D++ K F + D+V WS+M+A Y G+ E AI +F ++ + + N+ TF S+
Sbjct: 445 LGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSI 504
Query: 180 LYACSHCGLK-EKGMEFFDLMVKKYRRKPRLEHYTCV----VDLLGRCGYLDEAAALIRN 234
L C+ +G +F + K RL+ CV + + + G+++ A + +
Sbjct: 505 LNVCAATTASMGQGKQFHGFAI-----KSRLDSSLCVSSALLTMYAKKGHIESAEEVFKR 559
Query: 235 MPVKANAIIWKTLLSACKTH 254
K + + W +++S H
Sbjct: 560 QREK-DLVSWNSMISGYAQH 578
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 108/218 (49%), Gaps = 2/218 (0%)
Query: 33 PIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQ 92
P R+ ++ +L+ G +++G ++ + ++ +G D F SV+ + L G+
Sbjct: 58 PDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSATLCDELFGR 117
Query: 93 QIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHG 152
Q+H + +K G DV V +SL+ Y + D F E + +VV W+++I+ Y +
Sbjct: 118 QLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISGYARNS 177
Query: 153 KGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY 212
EE + LF +M+ + + N TF + L + G+ +G++ ++VK K +
Sbjct: 178 LNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKT-IPVS 236
Query: 213 TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+++L +CG + +A L VK+ + W +++S
Sbjct: 237 NSLINLYLKCGNVRKARILFDKTEVKS-VVTWNSMISG 273
>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 829
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 179/440 (40%), Positives = 266/440 (60%), Gaps = 22/440 (5%)
Query: 7 VAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRM- 65
V G++L MY +SGS+ E + +N++++ + G ++ +D Y + RM
Sbjct: 396 VVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLDGDGRSNTYQD----YQIERME 451
Query: 66 VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD 125
+G TF S+IS+ + + L +GQ++HA +KAG D + +SL+SMYSRCG L D
Sbjct: 452 LGI--STFTFGSLISAAASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVD 509
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
+ + F E +V+ W+SMI+ HG A+ LF M + NDVT++++L ACSH
Sbjct: 510 ACQVFDEMNDHNVISWTSMISGLAKHGYAARALELFHDMIAAGVKPNDVTYIAVLSACSH 569
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
GL ++G E F +M K + PR+EHY C+VDLLGR G +++A I MP + +A++WK
Sbjct: 570 AGLVKEGKEHFRMMQKHHGLIPRMEHYACMVDLLGRSGLVEDALDFINEMPCQVDALVWK 629
Query: 246 TLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERN 305
TLL ACKTH + D+ A ++ + PQD APYVLLSN++A A W V+ R MR++N
Sbjct: 630 TLLGACKTHNNMDIGEIAANHVIQLEPQDPAPYVLLSNLYAEAGLWDQVARIRSLMRDKN 689
Query: 306 VKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMD 365
+ KE G+SW+ + N +H+F GD SHP++ EI LE L E+K+ GYVPDT +HDM
Sbjct: 690 LMKEKGLSWMHVDNTIHEFRAGDTSHPQAEEIYTKLETLIREIKVMGYVPDTSVVLHDMS 749
Query: 366 SEEKEYNLKHHSEKLAIAFA-----EHTRGLIVM----------LPFKYISEIKNREIIV 410
E KE L HSEK+A+AF T+ + + KY+S+ REII+
Sbjct: 750 DELKELCLLQHSEKIAVAFGLISCTSATKPIRIFKNLRVCVDCHSALKYVSKATGREIIL 809
Query: 411 RDASRFHHFRNGKCSCGDYW 430
RD++RFH ++G+CSCG+YW
Sbjct: 810 RDSNRFHRMKDGECSCGEYW 829
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 139/305 (45%), Gaps = 15/305 (4%)
Query: 1 GFELDLVAGSSLAHMYMKS---GSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAED-V 56
G E D L MY KS SL +V MP NV+AW L++G Q G ++ V
Sbjct: 285 GLESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQV 344
Query: 57 LDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAG-ASLDVGVISSLIS 115
+ + M G RP+ IT+ S++ +C+ L G+QIH VK+ A L+V V ++L+S
Sbjct: 345 MILFCKMLNEGIRPNHITYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNV-VGNALVS 403
Query: 116 MYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVT 175
MY+ G ++++ F + ++V +S G G Q+E+ E + T
Sbjct: 404 MYAESGSIEEARHAFDQLYEKNMVSFSG-----NLDGDGRSNTYQDYQIERMELGISTFT 458
Query: 176 FVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM 235
F SL+ A + G+ KG L +K R + +V + RCGYL +A + M
Sbjct: 459 FGSLISAAASVGMLTKGQRLHALSLKAGFGSDRAIGNS-LVSMYSRCGYLVDACQVFDEM 517
Query: 236 PVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQG 293
N I W +++S H A + +++ GV P D +LS + +G
Sbjct: 518 N-DHNVISWTSMISGLAKHGYAARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEG 576
Query: 294 VSEFR 298
FR
Sbjct: 577 KEHFR 581
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 108/201 (53%), Gaps = 4/201 (1%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ G +L M+ K+G LV +V + R V+ W LI AQ+G +++ ++ + M
Sbjct: 188 DVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDML 247
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC---G 121
GF+PD+ T S++S+C+EL + GQQ+H+ ++ G D V L+ MY++
Sbjct: 248 ENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQ 307
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHG-KGEEAINLFEQMEQKEFEANDVTFVSLL 180
L ++ + F +V+ W+++++ Y G + + + LF +M + N +T+ S+L
Sbjct: 308 SLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSML 367
Query: 181 YACSHCGLKEKGMEFFDLMVK 201
AC++ G ++ G + VK
Sbjct: 368 KACANLGDQDSGRQIHTHCVK 388
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 116/269 (43%), Gaps = 19/269 (7%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPI--RNVIAWITLIAGKAQNGLAEDVLDQ 59
E D V +SL +Y K ++ V MP+ R++++W + + ++NG + L
Sbjct: 80 LETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTAMASCLSRNGAEAEALRL 139
Query: 60 YNLMRMVGFRPDKITFVSVISSC--SELATLGQGQQIHAEVVKAGA-SLDVGVISSLISM 116
+ G P+ T + +C SEL L G + V K G DV V +LI M
Sbjct: 140 FGETLEEGLLPNAFTLCAATQACFASELFHLA-GGAVLGLVFKLGFWGTDVSVGCALIDM 198
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
+++ G L + F VV+W+ +I Y G +EA+ LF M + F+ + T
Sbjct: 199 FAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDMLENGFQPDQYTL 258
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV----VDLLGRC---GYLDEAA 229
S+L AC+ G G + L ++ LE +CV VD+ + L A
Sbjct: 259 SSMLSACTELGSFRLGQQLHSLALRL-----GLESDSCVSCGLVDMYAKSHNGQSLHNAR 313
Query: 230 ALIRNMPVKANAIIWKTLLSACKTHKSTD 258
+ MP K N + W LLS S D
Sbjct: 314 EVFNRMP-KHNVMAWTALLSGYVQRGSQD 341
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 95/175 (54%), Gaps = 9/175 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D G+SL MY + G LV+ +V M NVI+W ++I+G A++G A L+ +
Sbjct: 486 GFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKHGYAARALELF 545
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV--ISSLISMYS 118
+ M G +P+ +T+++V+S+CS + +G++ H +++ L + + ++ +
Sbjct: 546 HDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKE-HFRMMQKHHGLIPRMEHYACMVDLLG 604
Query: 119 RCGCLDDSVKTFLE--CEYSDVVLWSSMIAAYGFHGK---GEEAINLFEQMEQKE 168
R G ++D++ E C+ D ++W +++ A H GE A N Q+E ++
Sbjct: 605 RSGLVEDALDFINEMPCQV-DALVWKTLLGACKTHNNMDIGEIAANHVIQLEPQD 658
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Query: 91 GQQIHAEVVKAGASL--DVGVISSLISMYSRCGCLDDSVKTF--LECEYSDVVLWSSMIA 146
G+ + +++ G+ L D V +SL+++YS+C + + F + D+V W++M +
Sbjct: 66 GRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTAMAS 125
Query: 147 AYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
+G EA+ LF + ++ N T + AC
Sbjct: 126 CLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQAC 162
>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like, partial [Vitis vinifera]
Length = 825
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 172/441 (39%), Positives = 274/441 (62%), Gaps = 15/441 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
+++ G+SL MY K G E E + + R+ + W +I+ Q G E+ L +N MR
Sbjct: 385 EILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMR 444
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
D+ TF S++ + + +A+L G+Q+H+ ++K+G +V S+L+ +Y++CG +
Sbjct: 445 QASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIK 504
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D+V+TF E ++V W++MI+AY +G+ E + F++M + + V+F+ +L ACS
Sbjct: 505 DAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACS 564
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL E+G+ F+ M + Y+ PR EHY VVD+L R G +EA L+ MP+ + I+W
Sbjct: 565 HSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMW 624
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNP-QDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
++L+AC+ HK+ ++A R A+++ + +DAAPYV +SNI+A+A +W+ VS+ +AMR+
Sbjct: 625 SSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRD 684
Query: 304 RNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHD 363
R VKK P SW+EIK++ H F+ D+ HP+ EI ++ LT M+ GY PDT +H+
Sbjct: 685 RGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGYKPDTSCALHN 744
Query: 364 MDSEEKEYNLKHHSEKLAIAFA----EHTRGLIVM----------LPFKYISEIKNREII 409
D + K +LK+HSE+LAIAFA ++VM K IS+I REI
Sbjct: 745 EDEKFKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACIDCHAAIKVISKIVGREIT 804
Query: 410 VRDASRFHHFRNGKCSCGDYW 430
VRD++RFHHFR+G CSCGD+W
Sbjct: 805 VRDSTRFHHFRDGFCSCGDFW 825
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 141/299 (47%), Gaps = 4/299 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
F ++ ++L Y K S+++ K+ MP ++ +++ +I+G A +G + D +
Sbjct: 280 NFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLF 339
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
++ F + F +++S S G+QIHA+ + A ++ V +SL+ MY++C
Sbjct: 340 RELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKC 399
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +++ F + V W++MI+AY G EE + LF +M Q A+ TF SLL
Sbjct: 400 GKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLL 459
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
A + G + ++K + ++D+ +CG + +A + MP + N
Sbjct: 460 RASASIASLSLGKQLHSFIIKSGFMSNVFSG-SALLDVYAKCGSIKDAVQTFQEMPDR-N 517
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEF 297
+ W ++SA + + + +E++ G+ P + +LS S +G+ F
Sbjct: 518 IVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHF 576
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 127/250 (50%), Gaps = 2/250 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G++ L+ G++L Y KS L ++ + MP + +++ +I G +++GL E ++ +
Sbjct: 179 GYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLF 238
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G +P + TF +V+ + L + GQQIH+ V+K +V V ++L+ YS+
Sbjct: 239 VEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKH 298
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
+ D+ K F E D V ++ +I+ Y + GK + A +LF +++ F+ F ++L
Sbjct: 299 DSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATML 358
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
S+ E G + + L +VD+ +CG +EA + N+ ++
Sbjct: 359 SIASNTLDWEMGRQIHAQTIVTTADSEILVG-NSLVDMYAKCGKFEEAEMIFTNLTHRS- 416
Query: 241 AIIWKTLLSA 250
A+ W ++SA
Sbjct: 417 AVPWTAMISA 426
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 92/175 (52%), Gaps = 2/175 (1%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y+KSG+L E K+ M R + W LI G +Q ++ + + M+ G PD +TF
Sbjct: 93 YVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTF 152
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
V+++S C+ Q Q+ +++K G + V ++L+ Y + LD + + F E
Sbjct: 153 VTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPE 212
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKE 190
D V +++MI Y G E+A+NLF +M+ + + TF ++L C++ GL +
Sbjct: 213 IDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVL--CANIGLDD 265
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 105/208 (50%), Gaps = 15/208 (7%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF ++ +GS+L +Y K GS+ + + + MP RN+++W +I+ AQNG AE L +
Sbjct: 482 GFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSF 541
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV--ISSLISMYS 118
M + G +PD ++F+ V+S+CS + +G H + LD +S++ M
Sbjct: 542 KEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLW-HFNSMTQIYKLDPRREHYASVVDMLC 600
Query: 119 RCGCLDDSVKTFLECEYS-DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
R G +++ K E D ++WSS++ A H E A +Q+ E + +V
Sbjct: 601 RSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYV 660
Query: 178 SL--LYACS---------HCGLKEKGME 194
++ +YA + H ++++G++
Sbjct: 661 NMSNIYAAAGQWENVSKVHKAMRDRGVK 688
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 80/185 (43%), Gaps = 15/185 (8%)
Query: 66 VGFRPDKITFVSVISSCSELATLGQGQQIHAEVV-KAGASLDVGVISSLISMYSRCGCLD 124
GF PD + + + L Q +Q+ ++ K S ++ +IS Y + G L
Sbjct: 46 TGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNM-----MISGYVKSGNLG 100
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
++ K F V W+ +I Y + +EA LF QM++ E + VTFV+LL S
Sbjct: 101 EARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLL---S 157
Query: 185 HCGLKEKGMEFFDLMVK--KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP----VK 238
C E G + + + K RL +VD + LD A L + MP V
Sbjct: 158 GCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVS 217
Query: 239 ANAII 243
NA+I
Sbjct: 218 YNAMI 222
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 349 bits (896), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 174/442 (39%), Positives = 260/442 (58%), Gaps = 14/442 (3%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
EL GS+L MY SL V + R+V+ W ++I+ AQ+G + + LD
Sbjct: 531 ELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLRE 590
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M + + +T VS + +CS+LA L QG++IH +++ G +++SLI MY RCG
Sbjct: 591 MNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGS 650
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
+ S + F D+V W+ MI+ YG HG G +A+NLF+Q + N +TF +LL A
Sbjct: 651 IQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSA 710
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
CSH GL E+G ++F +M +Y P +E Y C+VDLL R G +E I MP + NA
Sbjct: 711 CSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAA 770
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMR 302
+W +LL AC+ H + D+A A + + PQ + YVL++NI+++A RW+ ++ R M+
Sbjct: 771 VWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMK 830
Query: 303 ERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMH 362
ER V K PG SW+E+K ++H F +GD SHP +I +E L ++K GYVPDT +
Sbjct: 831 ERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGYVPDTNFVLQ 890
Query: 363 DMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNREI 408
D+D +EKE++L HSEK+A+AF T G + + K+IS+++ R+I
Sbjct: 891 DVDEDEKEFSLCGHSEKIALAFGLISTTAGTPLRIIKNLRVCGDCHSATKFISKVEKRDI 950
Query: 409 IVRDASRFHHFRNGKCSCGDYW 430
I+RD RFHHF +G CSCGDYW
Sbjct: 951 IMRDNYRFHHFVDGVCSCGDYW 972
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 148/322 (45%), Gaps = 22/322 (6%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIR----NVIAWITLIAGKAQNGLAEDVLD 58
+ DLV+ +++ Y GS E +++ M + ++I W L+ G Q G + L+
Sbjct: 426 QTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALE 485
Query: 59 QYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
+ M +G P+ T +++C ++ L G++IH V++ L GV S+LISMYS
Sbjct: 486 FFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYS 545
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
C L+ + F E DVV+W+S+I+A G+ A++L +M E N VT VS
Sbjct: 546 GCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVS 605
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC------VVDLLGRCGYLDEAAALI 232
L ACS +G E ++ R TC ++D+ GRCG + ++ +
Sbjct: 606 ALPACSKLAALRQGKEIHQFII-------RCGLDTCNFILNSLIDMYGRCGSIQKSRRIF 658
Query: 233 RNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLSNIHASAKR 290
MP + + + W ++S H A + ++ +G+ P LLS S
Sbjct: 659 DLMPQR-DLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLI 717
Query: 291 WQGVSEFREAMRERNVKKEPGV 312
+G F+ M + +P V
Sbjct: 718 EEGWKYFK--MMKTEYAMDPAV 737
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 164/353 (46%), Gaps = 21/353 (5%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
GS L +Y ++G + + ++ M RNV +W ++ G E+ + + LM G
Sbjct: 127 GSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGV 186
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
RPD F V +CSEL G+ ++ ++ G + V S++ M+ +CG +D + +
Sbjct: 187 RPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARR 246
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F E E+ DV +W+ M++ Y G+ ++A+ M+ + + VT+ +++ + G
Sbjct: 247 FFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQ 306
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM---PVKANAIIWK 245
E+ ++F M KP + +T ++ + GY EA ++ R M VK N+I
Sbjct: 307 FEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIA 366
Query: 246 TLLSACKTHKSTDMAGR-IAEEILGVNPQDAAPYVLLSNIHASAK-RWQGVSEFREAMRE 303
+ +SAC T+ S GR I + V D+ V S + AK R V+ + M
Sbjct: 367 SAVSAC-TNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGM-- 423
Query: 304 RNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPD 356
+K+ VSW N + SH ++ EL SEMK +G PD
Sbjct: 424 --IKQTDLVSW----NAMLAGYALRGSHEEAI-------ELLSEMKFQGIEPD 463
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 134/293 (45%), Gaps = 45/293 (15%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLM-------PIRNVIAWITLIAGKAQNGLA 53
G + D V +++ Y +SG E K M P NV++W LIAG QNG
Sbjct: 286 GVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKP--NVVSWTALIAGSEQNGYD 343
Query: 54 EDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGA-SLDVGVISS 112
+ L + M + G +P+ IT S +S+C+ L+ L G++IH +K D+ V +S
Sbjct: 344 FEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNS 403
Query: 113 LISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEAN 172
L+ Y++C ++ + + F + +D+V W++M+A Y G EEAI L +M+ + E +
Sbjct: 404 LVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPD 463
Query: 173 DVTFVSLLYACSHCGLKEKGMEFFDLM------------------------------VKK 202
+T+ L+ + G + +EFF M +
Sbjct: 464 IITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHG 523
Query: 203 YRRKPRLEHYTCV----VDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSAC 251
Y + +E T V + + C L+ A ++ + + + ++W +++SAC
Sbjct: 524 YVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTR-DVVVWNSIISAC 575
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 111/253 (43%), Gaps = 15/253 (5%)
Query: 70 PDKIT--FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV 127
PD+ + S++ C +L L G Q+HA++V G + + S L+ +Y + GC++D+
Sbjct: 85 PDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDAR 144
Query: 128 KTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCG 187
+ F + +V W++++ Y G EE I LF M + + F + ACS
Sbjct: 145 RMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELK 204
Query: 188 LKEKGMEFFDLMVKKYRRKPRLEHYTCV----VDLLGRCGYLDEAAALIRNMPVKANAII 243
G + +D M+ E +CV +D+ +CG +D A + K + +
Sbjct: 205 NYRVGKDVYDYML-----SIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFK-DVFM 258
Query: 244 WKTLLSACKTHKSTDMAGRIAEE--ILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
W ++S + A + + + GV P ++S +A + +++ S++ M
Sbjct: 259 WNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISG-YAQSGQFEEASKYFLEM 317
Query: 302 RERNVKKEPGVSW 314
K VSW
Sbjct: 318 GGLKDFKPNVVSW 330
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 113/279 (40%), Gaps = 43/279 (15%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE + S+ M++K G + + + ++V W +++G G + L
Sbjct: 220 GFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCI 279
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M++ G +PD++T+ ++IS Y++
Sbjct: 280 SDMKLSGVKPDQVTWNAIISG-----------------------------------YAQS 304
Query: 121 GCLDDSVKTFLECE-----YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVT 175
G +++ K FLE +VV W+++IA +G EA+++F +M + + N +T
Sbjct: 305 GQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSIT 364
Query: 176 FVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM 235
S + AC++ L G E +K L +VD +C + E A M
Sbjct: 365 IASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSV-EVARRKFGM 423
Query: 236 PVKANAIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNP 272
+ + + W +L+ S + A + E+ G+ P
Sbjct: 424 IKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEP 462
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 349 bits (896), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 181/446 (40%), Positives = 271/446 (60%), Gaps = 26/446 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+V G+++ MY K G L KV ++ +++VI+W TLI G AQNGLA + ++ Y +M
Sbjct: 452 DVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVYKMME 511
Query: 65 MVG-FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
P++ T+VS++ + + + L QG +IH V+K LDV V + LI +Y +CG L
Sbjct: 512 ECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRL 571
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
D++ F + V W+++I+ +G HG E+ + LF +M + + + VTFVSLL AC
Sbjct: 572 VDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSAC 631
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
SH G E+G F LM ++Y KP L+HY C+VDLLGR GYL+ A I++MP++ +A I
Sbjct: 632 SHSGFVEEGKWCFRLM-QEYGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASI 690
Query: 244 WKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
W LL AC+ H + ++ ++ + V+ ++ YVLLSNI+A+ +W+GV + R RE
Sbjct: 691 WGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARE 750
Query: 304 RNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHD 363
R +KK PG S +E+ +V F G++SHP+ EI L LT++MK GY+PD + D
Sbjct: 751 RGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQD 810
Query: 364 MDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIK 404
++ +EKE+ L HSE+LAIAF G+I P K+IS I
Sbjct: 811 VEEDEKEHILTSHSERLAIAF-----GIISTPPKSPIRIFKNLRVCGDCHNATKFISRIT 865
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
REI+VRD++RFHHF++G CSCGDYW
Sbjct: 866 QREIVVRDSNRFHHFKDGICSCGDYW 891
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 127/250 (50%), Gaps = 1/250 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ ++ +SL HMY + G + MP R++ +W +I+G QNG A LD
Sbjct: 245 GFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVL 304
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ MR+ G + + +T VS++ C +L + IH V+K G D+ V ++LI+MY++
Sbjct: 305 DEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKF 364
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L+D+ K F + +DVV W+S+IAAY + A F +M+ F+ + +T VSL
Sbjct: 365 GNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLA 424
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
+ + ++++ + VVD+ + G LD A + + VK +
Sbjct: 425 SIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVK-D 483
Query: 241 AIIWKTLLSA 250
I W TL++
Sbjct: 484 VISWNTLITG 493
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 116/242 (47%), Gaps = 6/242 (2%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNG-LAEDVLDQYNLMRMVGF 68
+ L ++Y G + +P ++V W ++I+ NG E + Y L+ +
Sbjct: 155 TRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGHFHEAIGCFYQLLLVSEI 214
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
RPD TF V+ +C TL G++IH K G +V V +SLI MYSR G +
Sbjct: 215 RPDFYTFPPVLKAC---GTLVDGRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARS 271
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F + + D+ W++MI+ +G +A+++ ++M + + N VT VS+L C G
Sbjct: 272 LFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGD 331
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
M L V K+ + L ++++ + G L++A + M + + + W +++
Sbjct: 332 ISTAM-LIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFI-TDVVSWNSII 389
Query: 249 SA 250
+A
Sbjct: 390 AA 391
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 80/180 (44%), Gaps = 3/180 (1%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
LD+ + L +Y K G LV+ + +P + + W +I+ +G AE L +
Sbjct: 551 LHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFG 610
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M G +PD +TFVS++S+CS + +G+ + + G + ++ + R G
Sbjct: 611 EMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAG 670
Query: 122 CLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
L+ + + D +W +++ A HG E + F E ++ +V + LL
Sbjct: 671 YLEMAYGFIKDMPLQPDASIWGALLGACRIHGNIE--LGKFASDRLFEVDSKNVGYYVLL 728
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 82/183 (44%), Gaps = 22/183 (12%)
Query: 94 IHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGK 153
+HA +V AG + + + L+++Y+ G + S TF + DV W+SMI+AY +G
Sbjct: 138 LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGH 197
Query: 154 GEEAINLFEQMEQ-KEFEANDVTFVSLLYACS--------HCGLKEKGMEFFDLMVKKYR 204
EAI F Q+ E + TF +L AC HC + G + +++ V
Sbjct: 198 FHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRRIHCWAFKLGFQ-WNVFVA--- 253
Query: 205 RKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIA 264
++ + R G+ A +L +MP + + W ++S + + A +
Sbjct: 254 --------ASLIHMYSRFGFTGIARSLFDDMPFR-DMGSWNAMISGLIQNGNAAQALDVL 304
Query: 265 EEI 267
+E+
Sbjct: 305 DEM 307
>gi|297745783|emb|CBI15839.3| unnamed protein product [Vitis vinifera]
Length = 505
Score = 349 bits (896), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 176/451 (39%), Positives = 263/451 (58%), Gaps = 26/451 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNV--IAWITLIAGKAQNGLAEDVLD 58
GFE D++ + L Y K G + E + M RN + W T+I+ Q G +
Sbjct: 60 GFEYDMILQTGLLDFYAKHGYVEEARNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAIS 119
Query: 59 QYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
+ M+ +P ++T VS++S+C+ L L G+ IH + +DV + ++LI MY
Sbjct: 120 MFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYC 179
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+CG L+ ++ F ++ W+S+I G +G+GEEAI F ME++ + + VTFV
Sbjct: 180 KCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVG 239
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+L CSH GL G +F M+ Y +P +EHY C+VDLLGR GYL EA LIR MP+K
Sbjct: 240 ILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMK 299
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
N+++ +LL AC+ HK T + ++ +++L ++P D YV LSN++AS RW V+ R
Sbjct: 300 PNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYASLSRWDDVNTCR 359
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
+ M +R V K PG S +E+ N VH+F GD SHP+ +I+ +L+E+ E+K +G+VP+T
Sbjct: 360 KLMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSHPQFTQINAFLDEIAKELKGQGHVPNTA 419
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPFKYISEIKN------------- 405
+HD++ EEKE +++HSE++A+AF GL+ P K I +KN
Sbjct: 420 NVLHDIEEEEKEGAIRYHSERIAVAF-----GLMSTPPGKTIRVVKNLRTCSDCHSAMKL 474
Query: 406 ------REIIVRDASRFHHFRNGKCSCGDYW 430
REIIVRD RFHHFRNG CSC DYW
Sbjct: 475 ISNAFKREIIVRDRKRFHHFRNGSCSCNDYW 505
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 127/268 (47%), Gaps = 8/268 (2%)
Query: 49 QNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVG 108
++G+ D L Y+ M P K +F ++ SC+ G+ H +++K G D+
Sbjct: 7 ESGVCPDFLGFYSGMLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMI 66
Query: 109 VISSLISMYSRCGCLDDSVKTF--LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQ 166
+ + L+ Y++ G ++++ F + S+ V W++MI+AY G+ AI++F+QM+
Sbjct: 67 LQTGLLDFYAKHGYVEEARNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISMFQQMQS 126
Query: 167 KEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLD 226
+ + +VT VSLL AC+H G + G E+ ++ R K + ++D+ +CG L+
Sbjct: 127 ENVKPTEVTMVSLLSACAHLGALDMG-EWIHGYIRTKRLKIDVVLGNALIDMYCKCGALE 185
Query: 227 EAAALIRNMPVKANAIIWKTLLSACKTHKSTD--MAGRIAEEILGVNPQDAAPYVLLSNI 284
A + + K N W +++ + + +A I E G+ P +LS
Sbjct: 186 AAIDVFHGLSRK-NIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGC 244
Query: 285 HASAKRWQGVSEFREAMRERNVKKEPGV 312
S G F E + + EPGV
Sbjct: 245 SHSGLLSAGQRYFSEMLGVYGL--EPGV 270
>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 823
Score = 349 bits (896), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 186/444 (41%), Positives = 264/444 (59%), Gaps = 30/444 (6%)
Query: 7 VAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV 66
V G++L MY +SG + E K + RN+++ + I ++ + Q M V
Sbjct: 390 VVGNALVSMYAESGCMEEARKAFDQLYERNLLSTSSDIGETGRSNASWS--SQIESMD-V 446
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
G TF S++S+ + + +GQQ+HA +K G D G+ +SL+SMYSRCG LDD+
Sbjct: 447 GV--STFTFASLLSAAATVGLPTKGQQLHALSIKTGFESDKGISNSLVSMYSRCGYLDDA 504
Query: 127 VKTFLECEYS-DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
+ F E E +V+ W+S+I+A HG E A++LF M + NDVT++++L ACSH
Sbjct: 505 CRAFDEMEDDHNVISWTSIISALAKHGHAERALSLFHDMILSGVKPNDVTYIAVLSACSH 564
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
GL ++G E+F M K +R PR+EHY C+VDLL R G + EA I MP KA+A++WK
Sbjct: 565 VGLVKEGKEYFRSMQKDHRLIPRMEHYACMVDLLARSGLVQEALEFINEMPCKADALVWK 624
Query: 246 TLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERN 305
TLL AC+T+++ ++ A ++ + PQD APYVLLSN++A W V+ R MR RN
Sbjct: 625 TLLGACRTYENIEIGEIAARHVIDLEPQDPAPYVLLSNLYAHGGLWDEVARIRSLMRHRN 684
Query: 306 VKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMD 365
+ KE G+SW+ + N +H+F GD SHPR+ EI L L E+K GYVPDT +HDM
Sbjct: 685 LSKETGLSWMHVGNTIHEFRAGDTSHPRAQEIYAKLAVLIREIKDIGYVPDTSIVLHDMS 744
Query: 366 SEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNR 406
+ KE L HSEK+A+AF GLI LP KYIS+ R
Sbjct: 745 DKLKEQCLLQHSEKIAVAF-----GLITTLPTKPIRIFKNLRVCADCHSAIKYISKSTGR 799
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EII+RD++RFH ++GKCSCG+YW
Sbjct: 800 EIILRDSNRFHRMKDGKCSCGEYW 823
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 141/310 (45%), Gaps = 14/310 (4%)
Query: 1 GFELDLVAGSSLAHMYMK---SGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAED-V 56
G D L MY K S+ KV + MP NV++W LI+G Q G E+
Sbjct: 279 GLVSDTCVSCGLVDMYTKLQMEQSMECARKVFKRMPTHNVMSWTALISGYVQCGGQENNA 338
Query: 57 LDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVI-SSLIS 115
++ M P+ +T+ S++ +C+ L+ G+QIHA V+K +V V+ ++L+S
Sbjct: 339 VELLCEMLNESIEPNHLTYSSLLKACANLSDQDSGRQIHARVMKTSIG-NVNVVGNALVS 397
Query: 116 MYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVT 175
MY+ GC++++ K F + +++ SS I G + Q+E + + T
Sbjct: 398 MYAESGCMEEARKAFDQLYERNLLSTSSDIGE-----TGRSNASWSSQIESMDVGVSTFT 452
Query: 176 FVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM 235
F SLL A + GL KG + L +K + +V + RCGYLD+A M
Sbjct: 453 FASLLSAAATVGLPTKGQQLHALSIKTGFESDK-GISNSLVSMYSRCGYLDDACRAFDEM 511
Query: 236 PVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQG 293
N I W +++SA H + A + +++ GV P D +LS +G
Sbjct: 512 EDDHNVISWTSIISALAKHGHAERALSLFHDMILSGVKPNDVTYIAVLSACSHVGLVKEG 571
Query: 294 VSEFREAMRE 303
FR ++
Sbjct: 572 KEYFRSMQKD 581
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 103/201 (51%), Gaps = 4/201 (1%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ G +L M+ ++G LV KV + R V+ W +I Q G A ++ + M
Sbjct: 182 DVSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGML 241
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC---G 121
GF PD T S++S+C+E + G GQQ+H+ V++ G D V L+ MY++
Sbjct: 242 EDGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQ 301
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAY-GFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
++ + K F +V+ W+++I+ Y G+ A+ L +M + E N +T+ SLL
Sbjct: 302 SMECARKVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLL 361
Query: 181 YACSHCGLKEKGMEFFDLMVK 201
AC++ ++ G + ++K
Sbjct: 362 KACANLSDQDSGRQIHARVMK 382
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 109/264 (41%), Gaps = 26/264 (9%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLM-PIRNVIAWITLIAGKAQNGLAEDVLDQY 60
+ D + +SL MY K G + +V M +R++++W + +NG ++ L
Sbjct: 75 LDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCLTRNGAEQEALVLL 134
Query: 61 NLMRMVGFRPDKITFVSVISSC--SELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
M G RP+ T + +C EL G + + DV V +LI M++
Sbjct: 135 GEMLESGLRPNAFTLCAAAHACFPGELFRSSGGTVLGFAIKTGFWGTDVSVGCALIDMFA 194
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
R G L + K F VV+W+ MI Y G +A+ LF M + FE + T S
Sbjct: 195 RNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGMLEDGFEPDGYTMSS 254
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDE----------- 227
++ AC+ G G + L+++ L TCV CG +D
Sbjct: 255 MVSACAEQGSAGLGQQLHSLVLRL-----GLVSDTCV-----SCGLVDMYTKLQMEQSME 304
Query: 228 -AAALIRNMPVKANAIIWKTLLSA 250
A + + MP N + W L+S
Sbjct: 305 CARKVFKRMPTH-NVMSWTALISG 327
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 82/189 (43%), Gaps = 8/189 (4%)
Query: 106 DVGVISSLISMYSRCGCLDDSVKTFLECE-YSDVVLWSSMIAAYGFHGKGEEAINLFEQM 164
D V +SL++MYS+CG + + + F D+V W++M +G +EA+ L +M
Sbjct: 78 DALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCLTRNGAEQEALVLLGEM 137
Query: 165 EQKEFEANDVTFVSLLYACSHCGL-KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCG 223
+ N T + +AC L + G +K + ++D+ R G
Sbjct: 138 LESGLRPNAFTLCAAAHACFPGELFRSSGGTVLGFAIKTGFWGTDVSVGCALIDMFARNG 197
Query: 224 YLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAP--YVLL 281
L AA + N V+ ++W +++ + AG+ E LG+ P Y +
Sbjct: 198 DL-VAARKVFNGLVERTVVVWTLMIT---RYVQGGCAGKAVELFLGMLEDGFEPDGYTMS 253
Query: 282 SNIHASAKR 290
S + A A++
Sbjct: 254 SMVSACAEQ 262
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 349 bits (896), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 170/450 (37%), Positives = 266/450 (59%), Gaps = 26/450 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF DL+ ++L HMY K G++ + +V MP R+V++W +I +NG + + +
Sbjct: 390 GFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETF 449
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+LM+ PD +T+++++++C L L G +I+ + +KA V + ++LI M ++
Sbjct: 450 HLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKH 509
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ + F DV+ W++MI Y HG EA+ LF++M ++ F N VTFV +L
Sbjct: 510 GSVERARYIFDTMVRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVL 569
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACS G ++G FF +++ P ++ Y C+VDLLGR G LDEA LI++MPVK
Sbjct: 570 SACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPT 629
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+ IW +LL AC+ H + D+A R AE L ++P D A YV LS+++A+A W+ V++ R+
Sbjct: 630 SSIWSSLLVACRIHGNLDVAERAAERCLMIDPYDGAVYVQLSHMYAAAGMWENVAKVRKV 689
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M R ++KE G +W+E+ +VH F + D+SHP EI L L + +K GY+P T
Sbjct: 690 MESRGIRKEQGCTWIEVAGKVHTFVVEDRSHPLVGEIYAELARLMNAIKREGYIPITQNV 749
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP--------------------FKYI 400
+HD+ ++KE + +HSEKLAIA+ ++ LP K+I
Sbjct: 750 LHDVGEQQKEEAISYHSEKLAIAYG------VLSLPSGTPIRIYKNLRVCSDCHSASKFI 803
Query: 401 SEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
S++ REII RDASRFHHF++G CSCGDYW
Sbjct: 804 SKVTGREIIARDASRFHHFKDGVCSCGDYW 833
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 136/257 (52%), Gaps = 8/257 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D+ +SL MY GS+ +V M +R+V++W +I G A+NG ED +
Sbjct: 289 GLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLF 348
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G +PD+IT++ ++++C+ A L ++IH++V AG D+ V ++L+ MY++C
Sbjct: 349 ATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKC 408
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + D+ + F DVV WS+MI AY +G G EA F M++ E + VT+++LL
Sbjct: 409 GAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLL 468
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY---TCVVDLLGRCGYLDEAAALIRNMPV 237
AC H G + GME + +K + H ++ + + G ++ A + M V
Sbjct: 469 NACGHLGALDVGMEIYTQAIK----ADLVSHVPLGNALIIMNAKHGSVERARYIFDTM-V 523
Query: 238 KANAIIWKTLLSACKTH 254
+ + I W ++ H
Sbjct: 524 RRDVITWNAMIGGYSLH 540
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 130/250 (52%), Gaps = 2/250 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D G++L MY+K GS+ + +V + IR+V + ++ G A++G E + +
Sbjct: 188 GFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELF 247
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ VG +P+KI+F+S++ C L G+ +HA+ + AG D+ V +SLI MY+ C
Sbjct: 248 YRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTC 307
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ + + F + DVV W+ MI Y +G E+A LF M+++ + + +T++ ++
Sbjct: 308 GSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIM 367
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+ E V L T +V + +CG + +A + MP + +
Sbjct: 368 NACAISANLNHAREIHS-QVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMP-RRD 425
Query: 241 AIIWKTLLSA 250
+ W ++ A
Sbjct: 426 VVSWSAMIGA 435
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 101/183 (55%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +L++ ++L +Y G++ E ++ + + V+ W LIAG AQ G ++ +
Sbjct: 87 GRQLNIYELNTLIKLYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALF 146
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G P ITF+SV+ +CS A L G+++HA+VV AG D + ++L+SMY +
Sbjct: 147 RQMVDEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKG 206
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +DD+ + F DV ++ M+ Y G E+A LF +M+Q + N ++F+S+L
Sbjct: 207 GSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSIL 266
Query: 181 YAC 183
C
Sbjct: 267 DGC 269
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 66/114 (57%)
Query: 71 DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTF 130
D T+V + C+EL G+Q+ +++ G L++ +++LI +YS CG + ++ + F
Sbjct: 56 DSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIF 115
Query: 131 LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
E VV W+++IA Y G +EA LF QM + E + +TF+S+L ACS
Sbjct: 116 DSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACS 169
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 349 bits (896), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 178/447 (39%), Positives = 262/447 (58%), Gaps = 24/447 (5%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E DLV+ +++ H + G + +K+ R++I+W ++IA A+ + + L ++
Sbjct: 199 ERDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHE 258
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M++ PDK+T VSV+S+C ++ LG G+ IH + + +D+ + +SL+ MY++CG
Sbjct: 259 MQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGD 318
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
+D+S++ F DV WS+MI HG GE A++ F +M ++ + NDVTF+ +L A
Sbjct: 319 IDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLSA 378
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
CSH GL ++G +F M K Y P++EHY CVVD+LGR G L EA LI++MP +AI
Sbjct: 379 CSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQEAMELIKSMPFAPDAI 438
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMR 302
+W+ LL AC+ +K+ ++A +L + P YVLLSNI++ AK W V R M+
Sbjct: 439 VWRALLGACRIYKNVEIAEEATVNLLELEPHVDGNYVLLSNIYSQAKEWDKVVNVRRMMK 498
Query: 303 ERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMH 362
N++K PG S +E+ N VH+F GD+SHP S +I L E+T+ +K GY P T + +
Sbjct: 499 NINIQKVPGSSSIEVDNAVHEFVAGDQSHPESKKILRMLSEITARLKANGYAPLTASVLQ 558
Query: 363 DMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEI 403
D D +EKE L HHSEKLAIAF GL+ P K IS
Sbjct: 559 DFDEKEKENALAHHSEKLAIAF-----GLLSTAPGSTIRIVKNLRVCDDCHIAIKLISRT 613
Query: 404 KNREIIVRDASRFHHFRNGKCSCGDYW 430
R IIVRD +RFHHF NG CSC DYW
Sbjct: 614 YKRRIIVRDRNRFHHFVNGSCSCKDYW 640
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 116/305 (38%), Gaps = 65/305 (21%)
Query: 19 SGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRP-DKITFVS 77
+ L+ V +P + W T+I + ++ + + MR P D +
Sbjct: 51 ANDLLYARSVFDEIPSPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSL 110
Query: 78 VISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG-------CLDDSVK-- 128
VI +C L G GQ++H +V+K G D+ V ++LI MY++ G LD+
Sbjct: 111 VIQACGRLKDPGNGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPD 170
Query: 129 ----TFLECEY------------------SDVVLWSSMI--------------------- 145
L EY D+V W++MI
Sbjct: 171 LVPYNVLLAEYVRVGEINLAHDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLFDRTCE 230
Query: 146 ----------AAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
AAY + EA+ LF +M+ + VT VS+L AC G G
Sbjct: 231 RDLISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMI 290
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK 255
+ +++ R + L+ T +VD+ +CG +D + + M + + W ++ H
Sbjct: 291 HEC-IERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNR-DVFAWSAMIMGLANHG 348
Query: 256 STDMA 260
++A
Sbjct: 349 FGELA 353
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 6/119 (5%)
Query: 78 VISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV---KTFLECE 134
V+S L Q QIHA ++K + V++ L+ C +D + F E
Sbjct: 6 VMSLLQNATKLNQIIQIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIP 65
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCG-LKEKG 192
D +W++MI AY +E+++LF QM +E D +SL+ CG LK+ G
Sbjct: 66 SPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQA--CGRLKDPG 122
>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 171/444 (38%), Positives = 264/444 (59%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE + ++L MY K G L V M ++V++W +L+ G + NG E+ + +
Sbjct: 71 GFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEAIKLF 130
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
MR+ G PD+I SV+S+C+EL + GQQIHA +VK+G + V +SL++MY++C
Sbjct: 131 CKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLVTMYAKC 190
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + D+ + F DV+ W+++I Y +G+G+ ++ ++QM + + +TF+ LL
Sbjct: 191 GSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITFIGLL 250
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
+ACSH GL G +F+ M K Y KP EHY C++DLLGR G L EA L+ M V +
Sbjct: 251 FACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQMVVAPD 310
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A++WK LL+AC+ HK ++ A+ + + P ++ PYV+LSN++++A +W+ + R
Sbjct: 311 AVVWKALLAACRVHKELELGEMAAKNLFELEPMNSMPYVMLSNMYSAAGKWEDAARIRRL 370
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
MR R + KEPG SW+E ++V F D++HP EI ++E+ +K GYVPD
Sbjct: 371 MRSRGICKEPGYSWIETNSKVSTFMSEDRNHPLRNEIYSKIDEIIMLIKEAGYVPDMSFA 430
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHT--RGLIVML------------PFKYISEIKNR 406
+HD D E KE L +HSEKLA+AF T +G + + KY S++ R
Sbjct: 431 LHDTDDEVKELGLAYHSEKLAVAFGLLTVPQGAPIRIFKNLRVCGDCHTAMKYTSKVYAR 490
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
II+RD++ FHHF G+CSCGDYW
Sbjct: 491 HIILRDSNCFHHFTEGRCSCGDYW 514
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 105/217 (48%), Gaps = 2/217 (0%)
Query: 32 MPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQG 91
M + ++W +LI G + G ED L + MR + D+ T SV++S + + +
Sbjct: 1 MEFDDEVSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNA 60
Query: 92 QQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFH 151
+H ++K G V ++LI MY++ G LD ++ F + DVV W+S++ Y +
Sbjct: 61 ISVHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHN 120
Query: 152 GKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEH 211
G EEAI LF +M + + S+L AC+ + + G + +VK + L
Sbjct: 121 GSYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKS-GLESSLSV 179
Query: 212 YTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
+V + +CG + +A NMP + + I W L+
Sbjct: 180 DNSLVTMYAKCGSIVDANRAFDNMPTR-DVISWTALI 215
>gi|356546233|ref|XP_003541534.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Glycine max]
Length = 582
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 178/445 (40%), Positives = 267/445 (60%), Gaps = 15/445 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ D ++L Y KS + KV MP R+++AW ++I+G QNGLA + ++ +
Sbjct: 138 GYASDSFVQAALIAFYAKSCTPRVARKVFDEMPQRSIVAWNSMISGYEQNGLANEAVEVF 197
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
N MR PD TFVSV+S+CS+L +L G +H +V +G +++V + +SL++M+SRC
Sbjct: 198 NKMRESRVEPDSATFVSVLSACSQLGSLDFGCWLHDCIVGSGITMNVVLATSLVNMFSRC 257
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + F +VVLW++MI+ YG HG G EA+ +F +M+ + N VTFV++L
Sbjct: 258 GDVGRARAVFYSMIEGNVVLWTAMISGYGMHGYGVEAMEVFHRMKARGVVPNSVTFVAVL 317
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV-KA 239
AC+H GL ++G F M ++Y P +EH+ C+VD+ GR G L+EA ++ + +
Sbjct: 318 SACAHAGLIDEGRSVFASMKQEYGVVPGVEHHVCMVDMFGRGGLLNEAYQFVKGLNSDEL 377
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
+W +L ACK HK+ D+ +AE ++ P++ YVLLSN++A A R V R
Sbjct: 378 VPAVWTAMLGACKMHKNFDLGVEVAENLINAEPENPGHYVLLSNMYALAGRMDRVESVRN 437
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M +R +KK+ G S +++ N+ + F+MGDKSHP + EI +L+EL K GY P +
Sbjct: 438 VMIQRGLKKQVGYSTIDVDNRSYLFSMGDKSHPETNEIYCFLDELIWRCKDAGYAPVPES 497
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVML--------------PFKYISEIKN 405
MH+++ EE+EY L++HSEKLA+AF G V L K+IS + N
Sbjct: 498 AMHELEGEEREYALRYHSEKLAVAFGLMKTGDGVTLRIVKNLRICEDCHSAIKFISAVMN 557
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
REIIVRD RFHHFR G CSC DYW
Sbjct: 558 REIIVRDKLRFHHFREGSCSCSDYW 582
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 138/296 (46%), Gaps = 6/296 (2%)
Query: 19 SGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSV 78
+GS+ ++ R + + + +LI ++ G + D + Y M + P TF SV
Sbjct: 55 AGSIAYTRRLFRSVSDPDSFLFNSLIKASSKFGFSLDAVLFYRRMLLSRIVPSTYTFTSV 114
Query: 79 ISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDV 138
I +C++L+ L G +H+ V +G + D V ++LI+ Y++ + K F E +
Sbjct: 115 IKACADLSLLCIGTLVHSHVFVSGYASDSFVQAALIAFYAKSCTPRVARKVFDEMPQRSI 174
Query: 139 VLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDL 198
V W+SMI+ Y +G EA+ +F +M + E + TFVS+L ACS G + G D
Sbjct: 175 VAWNSMISGYEQNGLANEAVEVFNKMRESRVEPDSATFVSVLSACSQLGSLDFGCWLHDC 234
Query: 199 MVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTD 258
+V + T +V++ RCG + A A+ +M ++ N ++W ++S H
Sbjct: 235 IVGS-GITMNVVLATSLVNMFSRCGDVGRARAVFYSM-IEGNVVLWTAMISGYGMHGYGV 292
Query: 259 MAGRIAEEI--LGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGV 312
A + + GV P +LS + +G S F +E V PGV
Sbjct: 293 EAMEVFHRMKARGVVPNSVTFVAVLSACAHAGLIDEGRSVFASMKQEYGVV--PGV 346
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 169/440 (38%), Positives = 261/440 (59%), Gaps = 24/440 (5%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L MY K G L + ++ M R+V+AW +I+G Q + L ++ M++
Sbjct: 259 TALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVE 318
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P+ +T VSV+S+C+ L L G+ +H+ + + SL + + ++L+ Y++CGC+DD+V+
Sbjct: 319 PNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEA 378
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F + W+++I +G+G EA+ LF M + E DVTF+ +L ACSH L
Sbjct: 379 FESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLV 438
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
E+G FD M + Y KPR EHY CVVDLLGR G +DEA IR MP++ NA+IW+ LLS
Sbjct: 439 EEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLS 498
Query: 250 ACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKE 309
+C HK+ ++ ++I+ +NP + Y+LLSNI+AS +W+ + R+ M++R ++K
Sbjct: 499 SCAVHKNVEIGEEALKQIVSLNPSHSGDYILLSNIYASVGQWKNAAMIRKEMKDRGIEKT 558
Query: 310 PGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEK 369
PG S +E+ V +F D HP+ EI +EE+ +K+ GY+P+T ++D EK
Sbjct: 559 PGCSLIELDGVVVEFFAEDSDHPQLKEIYQKVEEMIDRIKMAGYIPNTADVRLEVDEHEK 618
Query: 370 EYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREIIV 410
E ++ HHSEKLAIAF GL+ + P K IS++ NREI+V
Sbjct: 619 EVSVSHHSEKLAIAF-----GLMKLDPGATIRLSKNLRVCTDCHSATKLISKVYNREIVV 673
Query: 411 RDASRFHHFRNGKCSCGDYW 430
RD +RFHHF++G CSC DYW
Sbjct: 674 RDRNRFHHFKDGTCSCNDYW 693
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 82/258 (31%), Positives = 128/258 (49%), Gaps = 10/258 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D SSL HMY + + + + V+ W +I +NG +V++ +
Sbjct: 149 GLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVVEMF 208
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M VG D+IT VSV+++C + G+ + V + G + ++++LI MY++C
Sbjct: 209 KGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKC 268
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L + + F + DVV WS+MI+ Y + EA+ LF +M+ E E NDVT VS+L
Sbjct: 269 GELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVL 328
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY----TCVVDLLGRCGYLDEAAALIRNMP 236
AC+ G E G V Y R+ RL T +VD +CG +D+A +MP
Sbjct: 329 SACAVLGALETGK-----WVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMP 383
Query: 237 VKANAIIWKTLLSACKTH 254
VK N+ W L+ T+
Sbjct: 384 VK-NSWTWTALIKGMATN 400
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 106/217 (48%), Gaps = 6/217 (2%)
Query: 33 PIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQ 92
P NV+ L AG ++ L V ++ + PD+ T + SCS + TL G+
Sbjct: 84 PCYNVLMRALLHAGHPEDALHLFV----EMLDVASVCPDQHTVACALKSCSRMCTLDVGR 139
Query: 93 QIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHG 152
I A VK G D V+SSLI MY+ C + + F E + VV+W+++I AY +G
Sbjct: 140 GIQAYAVKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNG 199
Query: 153 KGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY 212
E + +F+ M + +++T VS++ AC G + G + + +K + R
Sbjct: 200 NWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNR-NLM 258
Query: 213 TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
T ++D+ +CG L +A L M + + + W ++S
Sbjct: 259 TALIDMYAKCGELGKARRLFDGMQSR-DVVAWSAMIS 294
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 85/191 (44%), Gaps = 17/191 (8%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
L ++ G++L Y K G + + + MP++N W LI G A NG + L+ ++
Sbjct: 352 LSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFS 411
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV------ISSLIS 115
MR P +TF+ V+ +CS + +G++ + + D G+ ++
Sbjct: 412 SMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMTQ-----DYGIKPRAEHYGCVVD 466
Query: 116 MYSRCGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGK---GEEAINLFEQMEQKEFEA 171
+ R G +D++ + + V+W +++++ H GEEA+ + +
Sbjct: 467 LLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVHKNVEIGEEALKQIVSLNPS--HS 524
Query: 172 NDVTFVSLLYA 182
D +S +YA
Sbjct: 525 GDYILLSNIYA 535
>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
Length = 785
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 172/441 (39%), Positives = 274/441 (62%), Gaps = 15/441 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
+++ G+SL MY K G E E + + R+ + W +I+ Q G E+ L +N MR
Sbjct: 345 EILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMR 404
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
D+ TF S++ + + +A+L G+Q+H+ ++K+G +V S+L+ +Y++CG +
Sbjct: 405 QASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIK 464
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D+V+TF E ++V W++MI+AY +G+ E + F++M + + V+F+ +L ACS
Sbjct: 465 DAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACS 524
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL E+G+ F+ M + Y+ PR EHY VVD+L R G +EA L+ MP+ + I+W
Sbjct: 525 HSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMW 584
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNP-QDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
++L+AC+ HK+ ++A R A+++ + +DAAPYV +SNI+A+A +W+ VS+ +AMR+
Sbjct: 585 SSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRD 644
Query: 304 RNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHD 363
R VKK P SW+EIK++ H F+ D+ HP+ EI ++ LT M+ GY PDT +H+
Sbjct: 645 RGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGYKPDTSCALHN 704
Query: 364 MDSEEKEYNLKHHSEKLAIAFA----EHTRGLIVM----------LPFKYISEIKNREII 409
D + K +LK+HSE+LAIAFA ++VM K IS+I REI
Sbjct: 705 EDEKFKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACIDCHAAIKVISKIVGREIT 764
Query: 410 VRDASRFHHFRNGKCSCGDYW 430
VRD++RFHHFR+G CSCGD+W
Sbjct: 765 VRDSTRFHHFRDGFCSCGDFW 785
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 141/299 (47%), Gaps = 4/299 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
F ++ ++L Y K S+++ K+ MP ++ +++ +I+G A +G + D +
Sbjct: 240 NFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLF 299
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
++ F + F +++S S G+QIHA+ + A ++ V +SL+ MY++C
Sbjct: 300 RELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKC 359
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +++ F + V W++MI+AY G EE + LF +M Q A+ TF SLL
Sbjct: 360 GKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLL 419
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
A + G + ++K + ++D+ +CG + +A + MP + N
Sbjct: 420 RASASIASLSLGKQLHSFIIKSGFMSNVFSG-SALLDVYAKCGSIKDAVQTFQEMPDR-N 477
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEF 297
+ W ++SA + + + +E++ G+ P + +LS S +G+ F
Sbjct: 478 IVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHF 536
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 105/208 (50%), Gaps = 15/208 (7%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF ++ +GS+L +Y K GS+ + + + MP RN+++W +I+ AQNG AE L +
Sbjct: 442 GFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSF 501
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV--ISSLISMYS 118
M + G +PD ++F+ V+S+CS + +G H + LD +S++ M
Sbjct: 502 KEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLW-HFNSMTQIYKLDPRREHYASVVDMLC 560
Query: 119 RCGCLDDSVKTFLECEYS-DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
R G +++ K E D ++WSS++ A H E A +Q+ E + +V
Sbjct: 561 RSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYV 620
Query: 178 SL--LYACS---------HCGLKEKGME 194
++ +YA + H ++++G++
Sbjct: 621 NMSNIYAAAGQWENVSKVHKAMRDRGVK 648
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 88/180 (48%), Gaps = 2/180 (1%)
Query: 71 DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTF 130
D TF +V+ + L + GQQIH+ V+K +V V ++L+ YS+ + D+ K F
Sbjct: 209 DSFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLF 268
Query: 131 LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKE 190
E D V ++ +I+ Y + GK + A +LF +++ F+ F ++L S+ E
Sbjct: 269 DEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWE 328
Query: 191 KGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
G + + L +VD+ +CG +EA + N+ ++ A+ W ++SA
Sbjct: 329 MGRQIHAQTIVTTADSEILVG-NSLVDMYAKCGKFEEAEMIFTNLTHRS-AVPWTAMISA 386
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 67/132 (50%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y+KSG+L E K+ M R + W LI G +Q ++ + + M+ G PD +TF
Sbjct: 88 YVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTF 147
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
V+++S C+ Q Q+ +++K G + V ++L+ Y + LD + + F E
Sbjct: 148 VTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPE 207
Query: 136 SDVVLWSSMIAA 147
D +++++ A
Sbjct: 208 IDSFTFAAVLCA 219
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 11/174 (6%)
Query: 66 VGFRPDKITFVSVISSCSELATLGQGQQIHAEVV-KAGASLDVGVISSLISMYSRCGCLD 124
GF PD + + + L Q +Q+ ++ K S ++ +IS Y + G L
Sbjct: 41 TGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNM-----MISGYVKSGNLG 95
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
++ K F V W+ +I Y + +EA LF QM++ E + VTFV+LL S
Sbjct: 96 EARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLL---S 152
Query: 185 HCGLKEKGMEFFDLMVK--KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
C E G + + + K RL +VD + LD A L + MP
Sbjct: 153 GCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMP 206
>gi|224115100|ref|XP_002332237.1| predicted protein [Populus trichocarpa]
gi|222831850|gb|EEE70327.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 176/447 (39%), Positives = 266/447 (59%), Gaps = 24/447 (5%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E LV+ +++ Y K G + E + + R+ I W +I G AQ+GL + L +
Sbjct: 3 EKSLVSLTAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQ 62
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M RP+++T ++V+S+C + L G+ +H+ + G ++V V +SLI MYS+CG
Sbjct: 63 MLNAKVRPNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCGS 122
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
L+D+ F DVV W+SM+ Y HG ++A+ LF++M ++ D+TF+ +L A
Sbjct: 123 LEDARLVFERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVLNA 182
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
CSH GL +G +FF M +Y +P++EHY C+V+LLGR GYL+EA L++NM + + +
Sbjct: 183 CSHAGLVSEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQDPV 242
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMR 302
+W TLL AC+ H + + +IAE ++ N ++ YVLLSNI+A+A W+GV+ R M+
Sbjct: 243 LWGTLLGACRLHGNIALGEQIAEYLVSQNLANSGTYVLLSNIYAAAGNWEGVARVRTLMK 302
Query: 303 ERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMH 362
E +KEPG S +E+ N+VH+F GD HP+S EI LEE+ +K GY P T +H
Sbjct: 303 ESGFEKEPGCSSIEVNNKVHEFLAGDLRHPKSREIYEMLEEINGWLKTHGYTPQTDIVLH 362
Query: 363 DMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEI 403
D++ +KE +L HSEKLA+AF GLI P K IS+I
Sbjct: 363 DLEDAQKERSLGVHSEKLALAF-----GLITTKPGTTIKIVKNLRVCADCHAVTKLISKI 417
Query: 404 KNREIIVRDASRFHHFRNGKCSCGDYW 430
R++++RD +RFHHF NG CSCGDYW
Sbjct: 418 TGRKVVMRDRNRFHHFVNGLCSCGDYW 444
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 99/191 (51%), Gaps = 11/191 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +++ G+SL MY K GSL + V + ++V+AW +++ G A +G ++D L +
Sbjct: 102 GIGINVRVGTSLIDMYSKCGSLEDARLVFERISNKDVVAWNSMVVGYAMHGFSQDALRLF 161
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVV-KAGASLDVGVISSLISMYSR 119
M M+G++P ITF+ V+++CS + +G + + + G V ++++ R
Sbjct: 162 KEMCMIGYQPTDITFIGVLNACSHAGLVSEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGR 221
Query: 120 CGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQ---KEFEANDVT 175
G L+++ + E D VLW +++ A HG I L EQ+ + + AN T
Sbjct: 222 AGYLEEAYELVKNMEIDQDPVLWGTLLGACRLHGN----IALGEQIAEYLVSQNLANSGT 277
Query: 176 FVSL--LYACS 184
+V L +YA +
Sbjct: 278 YVLLSNIYAAA 288
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 176/444 (39%), Positives = 269/444 (60%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE +L+ G+SL +Y K G + + KV M ++I+W T+IA
Sbjct: 452 GFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMI 511
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
N MR G PD+ T + ++ CS LA QG++IH + K+G +V + ++LI MYS+C
Sbjct: 512 NEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKC 571
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L++ +K F + DVV W+++I+A+G +G+G++A+ F+ ME + V F++ +
Sbjct: 572 GSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFI 631
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
+ACSH G+ ++G+ FFD M Y +PR+EHY CVVDLL R G L +A I +MP+K +
Sbjct: 632 FACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPD 691
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A +W LLSAC+ +T++A R++++IL +N D YVL+SNI+A+ +W V R +
Sbjct: 692 ASLWGALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVKTVRNS 751
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+ + +KKEPG SW+EI+ +V+ F GDKS + ++ LE L M GYV D
Sbjct: 752 MKTKGLKKEPGSSWIEIQKRVYVFRTGDKSFEQYDKVKDLLEYLVRLMAKEGYVADLQFA 811
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA----EHTRGLIVMLPF----------KYISEIKNR 406
+HD++ ++K L HSE+LAIAF + L+VM KYI++I R
Sbjct: 812 LHDVEEDDKRDMLCGHSERLAIAFGLLNTKPGSPLLVMKNLRVCGDCHTVTKYITKIMQR 871
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EI+VRDA+RFH F++G CSCGD+W
Sbjct: 872 EILVRDANRFHRFKDGACSCGDHW 895
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 153/312 (49%), Gaps = 7/312 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE D VA + L MY K G L+ ++V ++ + W +LI G Q+G ++ L+ +
Sbjct: 352 GFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESF 411
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+M+M +PD +TFV ++S S+LA + QG+ IH +V+K G ++ + +SL+ +Y++C
Sbjct: 412 KMMKMER-KPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKC 470
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +DD +K F D++ W+++IA+ + +M + ++ T + +L
Sbjct: 471 GEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGIL 530
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
CS ++ +G E + K + + ++++ +CG L+ + + M K +
Sbjct: 531 PMCSLLAVRRQGKEIHGYIFKS-GFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEK-D 588
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAE--EILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
+ W L+SA + A + + E+ GV P A + S +G+ F
Sbjct: 589 VVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFD 648
Query: 299 EAMRERNVKKEP 310
+ N+ EP
Sbjct: 649 RMKTDYNL--EP 658
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 123/258 (47%), Gaps = 19/258 (7%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE DL G++L MY + L V M R+ ++W +LI+G NG ED LD Y
Sbjct: 151 GFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMY 210
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ RM G PD T SV+ +C L + +G +H + K G + DV + + L+SMY +
Sbjct: 211 HKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKF 270
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
L ++ + F + D V W++MI Y G+ E ++ LF M F + ++ S +
Sbjct: 271 ERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMIDG-FVPDMLSITSTI 329
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRL-EHYTC-------VVDLLGRCGYLDEAAALI 232
AC G DL V K+ K + + C ++D+ +CG L A +
Sbjct: 330 RACGQSG---------DLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVF 380
Query: 233 RNMPVKANAIIWKTLLSA 250
K +++ W +L++
Sbjct: 381 DTTKCK-DSVTWNSLING 397
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 137/296 (46%), Gaps = 8/296 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D++ G+ L MY K L E +V M +++ + W T+I G AQ G E + +
Sbjct: 252 GIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLF 311
Query: 61 NLMRMV-GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
M M+ GF PD ++ S I +C + L G+ +H ++ +G D + LI MY++
Sbjct: 312 --MDMIDGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAK 369
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG L + + F + D V W+S+I Y G +E + F+ M+ E + + VTFV L
Sbjct: 370 CGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKM-ERKPDSVTFVLL 428
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L S +G V K+ + L ++D+ +CG +D+ + M
Sbjct: 429 LSIFSQLADINQG-RGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAH- 486
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQG 293
+ I W T++++ + ++ E+ G+ P +A +L A R QG
Sbjct: 487 DIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQG 542
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 88/184 (47%), Gaps = 1/184 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIR-LMPIRNVIAWITLIAGKAQNGLAEDVLDQ 59
G L ++ L Y + + V R + P NV W ++I NGL L
Sbjct: 49 GLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGY 108
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
Y MR +PD TF SVI+SC+ + L G +H ++ G D+ + ++LI MYSR
Sbjct: 109 YTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSR 168
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
LD++ F E D V W+S+I+ Y +G E+A++++ + + T S+
Sbjct: 169 FVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSV 228
Query: 180 LYAC 183
L AC
Sbjct: 229 LLAC 232
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 84/185 (45%), Gaps = 23/185 (12%)
Query: 77 SVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE-Y 135
S++ + S Q + +H+ ++ +G SL V LIS Y++ SV F
Sbjct: 24 SLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPT 83
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH-------CGL 188
++V LW+S+I A +G +A+ + +M +K+ + + TF S++ +C+ C +
Sbjct: 84 NNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIV 143
Query: 189 KEKGMEF---FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
E ME DL + ++D+ R LD A + M + +++ W
Sbjct: 144 HEHAMEMGFESDLYIG-----------NALIDMYSRFVDLDNARYVFEEMSNR-DSVSWN 191
Query: 246 TLLSA 250
+L+S
Sbjct: 192 SLISG 196
>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 876
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 169/450 (37%), Positives = 273/450 (60%), Gaps = 25/450 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
+E G++L ++K G++ + KV L+ ++VIAW ++AG AQ G E+ +
Sbjct: 432 NYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIF 491
Query: 61 NLMRMVGFRPDKITFVSVISSCS-ELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ + G +P++ TF S+I++C+ A++ QG+Q HA +K + + V SSL+++Y++
Sbjct: 492 HQLTREGIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAK 551
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G ++ + + F + D+V W+SMI+ Y HG+ ++A+ +FE+M+++ E + +TF+ +
Sbjct: 552 RGNIESAHEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGV 611
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
+ AC+H GL KG +F++M+ + P +EHY+C++DL R G L +A +I MP
Sbjct: 612 ISACAHAGLVGKGQNYFNIMINDHHINPTMEHYSCMIDLYSRAGMLGKAMDIINGMPFPP 671
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
A +W+ +L+A + H++ ++ AE+I+ + PQ +A YVLLSNI+A+A W R+
Sbjct: 672 AATVWRIVLAASRVHRNIELGKLAAEKIISLEPQHSAAYVLLSNIYAAAGNWHEKVNVRK 731
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M +R VKKEPG SW+E+KN+ + F GD SHP S I L EL + ++ GY PDT
Sbjct: 732 LMDKRRVKKEPGYSWIEVKNKTYSFLAGDLSHPLSDHIYSKLSELNTRLRDVGYQPDTNY 791
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYI 400
HD++ E+KE L HHSE+LAIAF GLI LP K +
Sbjct: 792 VFHDIEDEQKETILSHHSERLAIAF-----GLIATLPEIPLQIVKNLRVCGDCHSFIKLV 846
Query: 401 SEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
S ++ R I+VRD++RFHHF+ G CSCGDYW
Sbjct: 847 SLVEKRYIVVRDSNRFHHFKGGLCSCGDYW 876
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 141/289 (48%), Gaps = 5/289 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G L G+SL MY K+G++ +G +V M R+V++W +L+ G + N + V + +
Sbjct: 132 GLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWELF 191
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
LM++ G+RPD T +VI++ + + G QIHA VVK G + V +SLISM S+
Sbjct: 192 CLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKS 251
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L D+ F E D V W+SMIA + +G+ EA F M+ + TF S++
Sbjct: 252 GMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVI 311
Query: 181 YACSHCGLKEKGM-EFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
+C+ LKE G+ K T ++ L +C +D+A +L M
Sbjct: 312 KSCA--SLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQ 369
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHA 286
+ + W ++S + TD A + + GV P +L+ HA
Sbjct: 370 SVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILTVQHA 418
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 139/277 (50%), Gaps = 9/277 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE + + +SL M KSG L + V M ++ ++W ++IAG NG + + +
Sbjct: 233 GFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETF 292
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
N M++ G +P TF SVI SC+ L LG + +H + +K+G S + V+++L+ ++C
Sbjct: 293 NNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKC 352
Query: 121 GCLDDSVKTF-LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
+DD+ F L VV W++MI+ Y +G ++A+NLF M ++ + N T+ ++
Sbjct: 353 KEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTI 412
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L + E E ++ Y + + T ++D + G + +A + + K
Sbjct: 413 LTVQHAVFISEIHAE---VIKTNYEKSSSVG--TALLDAFVKIGNISDAVKVFELIETK- 466
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQD 274
+ I W +L+ T+ A +I ++ G+ P +
Sbjct: 467 DVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNE 503
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 129/252 (51%), Gaps = 16/252 (6%)
Query: 34 IRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQ 93
+++V++W +I+G QNG + ++ ++LMR G +P+ T+ ++++ + +
Sbjct: 368 VQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILTVQHAVFI----SE 423
Query: 94 IHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGK 153
IHAEV+K V ++L+ + + G + D+VK F E DV+ WS+M+A Y G+
Sbjct: 424 IHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGE 483
Query: 154 GEEAINLFEQMEQKEFEANDVTFVSLLYACSH-CGLKEKGMEFFDLMVKKYRRKPRLEHY 212
EEA +F Q+ ++ + N+ TF S++ AC+ E+G +F Y K RL +
Sbjct: 484 TEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQF-----HAYAIKLRLNNA 538
Query: 213 TCV----VDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL 268
CV V L + G ++ A + + + + + W +++S H A + EE+
Sbjct: 539 LCVSSSLVTLYAKRGNIESAHEIFKRQKER-DLVSWNSMISGYAQHGQAKKALEVFEEMQ 597
Query: 269 GVNPQ-DAAPYV 279
N + DA ++
Sbjct: 598 KRNLEVDAITFI 609
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 110/228 (48%), Gaps = 6/228 (2%)
Query: 25 GEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSE 84
+++ P+R++ L+ ++ ++ L + + G PD T V+S C+
Sbjct: 55 AQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAG 114
Query: 85 LATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSM 144
G+Q+H + VK G + V +SL+ MY++ G + D + F E DVV W+S+
Sbjct: 115 SFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSL 174
Query: 145 IAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYR 204
+ Y ++ ++ LF M+ + + + T +++ A ++ G GM+ L+VK
Sbjct: 175 LTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGF 234
Query: 205 RKPRLEHYTC--VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
RL C ++ +L + G L +A + NM K +++ W ++++
Sbjct: 235 ETERL---VCNSLISMLSKSGMLRDARVVFDNMENK-DSVSWNSMIAG 278
>gi|302785461|ref|XP_002974502.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
gi|300158100|gb|EFJ24724.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
Length = 615
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 182/444 (40%), Positives = 272/444 (61%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + DLV +++ +MY K GS+ E V MP +NVI+W T+IA QN LA++ L +
Sbjct: 172 GMDSDLVTANAIINMYGKCGSIGEAFAVFTRMPEKNVISWSTMIAAFCQNELADEALLFF 231
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
LM+ G D+IT+VSV+ + + + L G+ +H +V AG + V ++L++MY +C
Sbjct: 232 KLMQQEGMELDRITYVSVLDAYTSVGALELGKALHVRIVYAGLDTSIVVGNTLVNMYGKC 291
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G DD+ F +VV W++M+AAYG +G+ EA+ LF+ M+ + ND+TFV++L
Sbjct: 292 GSPDDARDVFDSMVEKNVVSWNAMLAAYGQNGRSREALALFDSMDLEGVRPNDITFVTIL 351
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
Y CSH G + + F M + + PR H+ C++D+LGR G L+EA LI+ MPV A+
Sbjct: 352 YCCSHSGKFKDAVSHFVEMRQDFGITPREVHFGCLIDMLGRSGKLEEAEELIQAMPVPAD 411
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A++W +LL AC THK D A R AEE P+ AA Y++LSN++A+ K+W ++ R+
Sbjct: 412 AVLWTSLLCACVTHKDEDRAARAAEEAFQREPRCAAAYIMLSNLYAALKKWDEAAKVRKR 471
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M + V+K+ G SW+EI QVH+F GD HP I L+ L SEM+++GY PD
Sbjct: 472 MEQAGVRKQAGRSWIEIDKQVHEFVAGDSIHPDKSRIFKTLQRLMSEMRIKGYEPDRKVV 531
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAF---AEHTRGLIVML-----------PFKYISEIKNR 406
+H M+ EEK+ L +HSEKLA+AF + R + ++ K+IS ++ R
Sbjct: 532 IHSMEEEEKDEVLFYHSEKLAVAFGIASTPPRTPLCIVKNLRVCSDCHSAIKFISGVEGR 591
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
I VRD++RFHHF G+CSCGDYW
Sbjct: 592 RITVRDSNRFHHFDRGECSCGDYW 615
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 149/294 (50%), Gaps = 5/294 (1%)
Query: 12 LAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPD 71
L MY K GSLVE ++V M +NV +W L+AG Q+G + + ++ M G PD
Sbjct: 82 LVDMYGKCGSLVEAKRVFDAMQHKNVFSWTMLMAGFVQSGRGVEAIQLFHRMCQEGELPD 141
Query: 72 KITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFL 131
++ + I SC L QG++IH+ G D+ +++I+MY +CG + ++ F
Sbjct: 142 RVALLKFIDSCGAAKALSQGREIHSAAASCGMDSDLVTANAIINMYGKCGSIGEAFAVFT 201
Query: 132 ECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEK 191
+V+ WS+MIAA+ + +EA+ F+ M+Q+ E + +T+VS+L A + G E
Sbjct: 202 RMPEKNVISWSTMIAAFCQNELADEALLFFKLMQQEGMELDRITYVSVLDAYTSVGALEL 261
Query: 192 GMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSAC 251
G +V + T +V++ G+CG D+A + +M V+ N + W +L+A
Sbjct: 262 GKALHVRIVYAGLDTSIVVGNT-LVNMYGKCGSPDDARDVFDSM-VEKNVVSWNAMLAAY 319
Query: 252 KTHKSTDMAGRIAE--EILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
+ + A + + ++ GV P D +L S K VS F E MR+
Sbjct: 320 GQNGRSREALALFDSMDLEGVRPNDITFVTILYCCSHSGKFKDAVSHFVE-MRQ 372
>gi|334186622|ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g16835, mitochondrial; AltName: Full=Protein DYW10;
Flags: Precursor
gi|332658412|gb|AEE83812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 656
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 187/440 (42%), Positives = 276/440 (62%), Gaps = 15/440 (3%)
Query: 6 LVAGSSLAHMYMKSGSLVEGEKVIRLMPI-RNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
+VA +++ YMK+ + E + + M + +N++ W +I+G +N ED L + M
Sbjct: 217 VVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAML 276
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G RP+ S + CSEL+ L G+QIH V K+ DV ++SLISMY +CG L
Sbjct: 277 EEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELG 336
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D+ K F + DVV W++MI+ Y HG ++A+ LF +M + + +TFV++L AC+
Sbjct: 337 DAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACN 396
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL GM +F+ MV+ Y+ +P+ +HYTC+VDLLGR G L+EA LIR+MP + +A ++
Sbjct: 397 HAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVF 456
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
TLL AC+ HK+ ++A AE++L +N Q+AA YV L+NI+AS RW+ V+ R+ M+E
Sbjct: 457 GTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKES 516
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
NV K PG SW+EI+N+VH F D+ HP I L+EL +MKL GY P+ +H++
Sbjct: 517 NVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNV 576
Query: 365 DSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNREIIV 410
+ E+KE L HSEKLA+AF + +G + + K+ISEI+ REIIV
Sbjct: 577 EEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIV 636
Query: 411 RDASRFHHFRNGKCSCGDYW 430
RD +RFHHF++G CSCGDYW
Sbjct: 637 RDTTRFHHFKDGSCSCGDYW 656
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 80/179 (44%), Gaps = 33/179 (18%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ A +SL MY K G L + K+ +M ++V+AW +I+G AQ+G A+ L + M
Sbjct: 318 DVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMI 377
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
RPD ITFV+V+ +C+ HA +V G + S++ Y D
Sbjct: 378 DNKIRPDWITFVAVLLACN-----------HAGLVNIG----MAYFESMVRDYKVEPQPD 422
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
++ M+ G GK EEA+ L M F + F +LL AC
Sbjct: 423 H---------------YTCMVDLLGRAGKLEEALKLIRSM---PFRPHAAVFGTLLGAC 463
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/313 (20%), Positives = 136/313 (43%), Gaps = 17/313 (5%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E D + + + Y+++ + + + MP ++ +W T+I G A+ G E + +
Sbjct: 121 EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYS 180
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M +++++ ++IS E L + K V +++I+ Y +
Sbjct: 181 M----MEKNEVSWNAMISGYIECGDLEKASHF----FKVAPVRGVVAWTAMITGYMKAKK 232
Query: 123 LDDSVKTFLECEYS-DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
++ + F + + ++V W++MI+ Y + + E+ + LF M ++ N S L
Sbjct: 233 VELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALL 292
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
CS + G + + V K + T ++ + +CG L +A L M K +
Sbjct: 293 GCSELSALQLGRQIHQI-VSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMK-KKDV 350
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILG--VNPQDAAPY--VLLSNIHASAKRWQGVSEF 297
+ W ++S H + D A + E++ + P D + VLL+ HA G++ F
Sbjct: 351 VAWNAMISGYAQHGNADKALCLFREMIDNKIRP-DWITFVAVLLACNHAGLVN-IGMAYF 408
Query: 298 REAMRERNVKKEP 310
+R+ V+ +P
Sbjct: 409 ESMVRDYKVEPQP 421
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 45/234 (19%), Positives = 93/234 (39%), Gaps = 47/234 (20%)
Query: 17 MKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFV 76
++SG + +V M +N I W +L+ G +++ P ++
Sbjct: 72 VRSGDIDGALRVFHGMRAKNTITWNSLLIGISKD-------------------PSRMM-- 110
Query: 77 SVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYS 136
+ Q+ E+ + D + ++S Y R + + F +
Sbjct: 111 -------------EAHQLFDEIPEP----DTFSYNIMLSCYVRNVNFEKAQSFFDRMPFK 153
Query: 137 DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFF 196
D W++MI Y G+ E+A LF M +K N+V++ +++ CG EK FF
Sbjct: 154 DAASWNTMITGYARRGEMEKARELFYSMMEK----NEVSWNAMISGYIECGDLEKASHFF 209
Query: 197 DLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+ + + +T ++ + ++ A A+ ++M V N + W ++S
Sbjct: 210 KVAPVR-----GVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISG 258
>gi|356550971|ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 703
Score = 348 bits (894), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 172/445 (38%), Positives = 262/445 (58%), Gaps = 15/445 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D+ S+L Y K G ++ K + RNV+AW ++ QNG E+ L+ +
Sbjct: 259 GLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLTAYLQNGHFEETLNLF 318
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M + RP++ TF ++++C+ L L G +H +V +G + V ++LI+MYS+
Sbjct: 319 TKMELEDTRPNEFTFAVLLNACASLVALAYGDLLHGRIVMSGFKNHLIVGNALINMYSKS 378
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +D S F DV+ W++MI Y HG G++A+ +F+ M N VTF+ +L
Sbjct: 379 GNIDSSYNVFSNMMNRDVITWNAMICGYSHHGLGKQALLVFQDMMSAGECPNYVTFIGVL 438
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP-VKA 239
AC H L ++G +FD ++KK+ +P LEHYTC+V LLGR G LDEA ++ VK
Sbjct: 439 SACVHLALVQEGFYYFDQIMKKFDVEPGLEHYTCMVALLGRAGLLDEAENFMKTTTQVKW 498
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
+ + W+TLL+AC H++ ++ +I E ++ ++P D Y LLSN+HA A++W GV + R+
Sbjct: 499 DVVAWRTLLNACHIHRNYNLGKQITETVIQMDPHDVGTYTLLSNMHAKARKWDGVVKIRK 558
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M+ERN+KKEPG SWL+I+N H F +HP S +I +++L + +K GY PD G
Sbjct: 559 LMKERNIKKEPGASWLDIRNNTHVFVSEGSNHPESTQIFEKVQQLLAMIKPLGYAPDVGV 618
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFA----------EHTRGLIVM----LPFKYISEIKN 405
+HD++ E+KE L HHSEKLA+A+ + L + + K IS+ N
Sbjct: 619 VLHDVEDEQKEGYLSHHSEKLALAYGLMKIPPPGPIRIIKNLRMCDDCHIAVKLISKATN 678
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
R IIVRDA+RFHHFR G C+C D+W
Sbjct: 679 RLIIVRDANRFHHFREGLCTCNDHW 703
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 153/319 (47%), Gaps = 16/319 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G L ++L HMY + + +++ +P +V ++ ++++ ++G +
Sbjct: 158 GLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSYNSILSALVESGCRGEAAQV- 216
Query: 61 NLMRMVG--FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
L RMV D +T+VSV+ C+++ L G QIHA+++K G DV V S+LI Y
Sbjct: 217 -LKRMVDECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYG 275
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+CG + ++ K F +VV W++++ AY +G EE +NLF +ME ++ N+ TF
Sbjct: 276 KCGEVLNARKQFDGLRDRNVVAWTAVLTAYLQNGHFEETLNLFTKMELEDTRPNEFTFAV 335
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY---TCVVDLLGRCGYLDEAAALIRNM 235
LL AC+ + + DL+ + H ++++ + G +D + + NM
Sbjct: 336 LLNACA----SLVALAYGDLLHGRIVMSGFKNHLIVGNALINMYSKSGNIDSSYNVFSNM 391
Query: 236 PVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQG 293
+ + I W ++ H A + ++++ G P +LS A +G
Sbjct: 392 -MNRDVITWNAMICGYSHHGLGKQALLVFQDMMSAGECPNYVTFIGVLSACVHLALVQEG 450
Query: 294 VSEFREAMRERNVKKEPGV 312
F + M++ +V EPG+
Sbjct: 451 FYYFDQIMKKFDV--EPGL 467
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 123/258 (47%), Gaps = 25/258 (9%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY-NLM 63
D+ +SL ++Y K G K+ M RNV++W L+ G G +VL + NL+
Sbjct: 60 DITQINSLINLYSKCGQSKCARKLFDRMLQRNVVSWSALMMGYLHKGEVLEVLGLFRNLV 119
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
+ P++ F V+S C++ + +G+Q H ++K+G L V ++LI MYSRC +
Sbjct: 120 SLDSAYPNEYIFTIVLSCCADSGRVKEGKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHV 179
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
D +++ DV ++S+++A G EA + ++M + + VT+VS+L C
Sbjct: 180 DSAMQILDTVPGDDVFSYNSILSALVESGCRGEAAQVLKRMVDECVIWDSVTYVSVLGLC 239
Query: 184 S-----------HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALI 232
+ H L + G+ FD+ V + ++D G+CG + A
Sbjct: 240 AQIRDLQLGLQIHAQLLKTGL-VFDVFVS-----------STLIDTYGKCGEVLNARKQF 287
Query: 233 RNMPVKANAIIWKTLLSA 250
+ + N + W +L+A
Sbjct: 288 DGLRDR-NVVAWTAVLTA 304
>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 577
Score = 348 bits (894), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 175/446 (39%), Positives = 265/446 (59%), Gaps = 25/446 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLM-PIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
D+V+ +++ Y KS LV +++ LM RN + W T+I+ Q G + + M
Sbjct: 137 DVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMISAYVQCGEFGTAISMFQQM 196
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
+ +P ++T VS++S+C+ L L G+ IH + +DV + ++LI MY +CG L
Sbjct: 197 QSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGAL 256
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
+ ++ F ++ W+S+I G +G+GEEAI F ME++ + + VTFV +L C
Sbjct: 257 EAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGC 316
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
SH GL G +F M+ Y +P +EHY C+VDLLGR GYL EA LIR MP+K N+++
Sbjct: 317 SHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKPNSMV 376
Query: 244 WKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
+LL AC+ HK T + ++ +++L ++P D YV LSN++AS RW V+ R+ M +
Sbjct: 377 LGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYASLSRWDDVNTCRKLMIK 436
Query: 304 RNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHD 363
R V K PG S +E+ N VH+F GD SHP+ +I+ +L+E+ E+K +G+VP+T +HD
Sbjct: 437 RGVHKTPGCSSIEVNNIVHEFVAGDTSHPQFTQINAFLDEIAKELKGQGHVPNTANVLHD 496
Query: 364 MDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPFKYISEIKN------------------ 405
++ EEKE +++HSE++A+AF GL+ P K I +KN
Sbjct: 497 IEEEEKEGAIRYHSERIAVAF-----GLMSTPPGKTIRVVKNLRTCSDCHSAMKLISNAF 551
Query: 406 -REIIVRDASRFHHFRNGKCSCGDYW 430
REIIVRD RFHHFRNG CSC DYW
Sbjct: 552 KREIIVRDRKRFHHFRNGSCSCNDYW 577
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 146/316 (46%), Gaps = 17/316 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE D++ + L Y K G L ++V MP R+V+A +I+ +++G E+ + +
Sbjct: 40 GFEYDMILQTGLLDFYAKVGDLKCAKRVFMGMPRRDVVANNAMISALSKHGYVEEARNLF 99
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQ-QIHAEVVKAGASLDVGVISSLISMYSR 119
+ M + ++ S+I+ +L + + VK DV +++I Y +
Sbjct: 100 DNMT----ERNSCSWNSMITCYCKLGDINSARLMFDCNPVK-----DVVSWNAIIDGYCK 150
Query: 120 CGCLDDSVKTFLECEYS-DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
L + + FL + + V W++MI+AY G+ AI++F+QM+ + + +VT VS
Sbjct: 151 SKQLVAAQELFLLMGSARNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVS 210
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
LL AC+H G + G E+ ++ R K + ++D+ +CG L+ A + + K
Sbjct: 211 LLSACAHLGALDMG-EWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRK 269
Query: 239 ANAIIWKTLLSACKTHKSTD--MAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSE 296
N W +++ + + +A I E G+ P +LS S G
Sbjct: 270 -NIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRY 328
Query: 297 FREAMRERNVKKEPGV 312
F E + + EPGV
Sbjct: 329 FSEMLGVYGL--EPGV 342
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 94/190 (49%), Gaps = 15/190 (7%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
++D+V G++L MY K G+L V + +N+ W ++I G NG E+ + +
Sbjct: 236 LKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFI 295
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV--ISSLISMYSR 119
+M G +PD +TFV ++S CS L GQ+ +E++ L+ GV ++ + R
Sbjct: 296 VMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGV-YGLEPGVEHYGCMVDLLGR 354
Query: 120 CGCLDDSVKTF--LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFE-----AN 172
G L ++++ + + + +VL S++ A H + L EQ+ Q+ E
Sbjct: 355 AGYLKEALELIRAMPMKPNSMVL-GSLLRACQIH----KDTKLGEQVTQQLLELDPCDGG 409
Query: 173 DVTFVSLLYA 182
+ F+S LYA
Sbjct: 410 NYVFLSNLYA 419
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 82/181 (45%), Gaps = 9/181 (4%)
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P K +F ++ SC+ G+ H +++K G D+ + + L+ Y++ G L + +
Sbjct: 8 PSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGDLKCAKRV 67
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F+ DVV ++MI+A HG EEA NLF+ M ++ N ++ S++ G
Sbjct: 68 FMGMPRRDVVANNAMISALSKHGYVEEARNLFDNMTER----NSCSWNSMITCYCKLGDI 123
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
FD K + + ++D + L A L M N++ W T++S
Sbjct: 124 NSARLMFDCNPVK-----DVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMIS 178
Query: 250 A 250
A
Sbjct: 179 A 179
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 348 bits (893), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 183/449 (40%), Positives = 265/449 (59%), Gaps = 26/449 (5%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
++ ++ GS+L MY K ++ E V R M +NVI+W ++ G QNG +E+ + +
Sbjct: 301 YQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFC 360
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M+ PD T SVISSC+ LA+L +G Q H + + +G V V ++LI++Y +CG
Sbjct: 361 DMQRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCG 420
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
L+ + + F E + D V W+++++ Y GK E I+LFE M + VTFV +L
Sbjct: 421 SLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLS 480
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
ACS GL EKG +F+ MVK++R P +HYTC++DLL R G L+EA I MP +A
Sbjct: 481 ACSRAGLVEKGYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDA 540
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
I W TLLS+C+ + + ++ AE + + PQ+ A Y+LLS+I+A+ +W V++ R+ M
Sbjct: 541 IGWATLLSSCRLNGNLEIGKWAAESLHKLEPQNPASYILLSSIYAAKGKWDDVAKLRKGM 600
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
RE VKKEPG SW++ KN+VH F+ D+S P S +I LE L +M GYVPD +
Sbjct: 601 REMGVKKEPGHSWIKYKNKVHIFSADDRSSPFSDQIYAKLESLYLKMIEEGYVPDMSFVL 660
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP--------------------FKYIS 401
HD++ EK L HHSEKLAIAF ++ +P KYIS
Sbjct: 661 HDVEKSEKIKMLNHHSEKLAIAFG------LLFIPDGLQIRVVKNLRVCGDCHNATKYIS 714
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
I REI+VRDA RFH F++G CSCGD+W
Sbjct: 715 RITQREILVRDAVRFHLFKDGVCSCGDFW 743
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 156/310 (50%), Gaps = 4/310 (1%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E ++V +++ ++ +VE E++ MP ++ I+W T+I G QNGL ++ +D++
Sbjct: 201 EKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKE 260
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M + GF D+ TF SV+++C L +G+QIHA +++ ++ V S+L+ MY +C
Sbjct: 261 MGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRN 320
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
+ + F + + +V+ W++M+ YG +G EEA+ +F M++ E +D T S++ +
Sbjct: 321 VKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISS 380
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
C++ E+G +F + + ++ L G+CG L+ A L M ++ + +
Sbjct: 381 CANLASLEEGAQFHGQALAS-GLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIR-DEV 438
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
W L+S + + E +L G+ P +LS + +G F
Sbjct: 439 SWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECM 498
Query: 301 MRERNVKKEP 310
++E + P
Sbjct: 499 VKEHRITPIP 508
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 137/291 (47%), Gaps = 34/291 (11%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
+L + ++L Y K G L + ++V MP +V++W +L++G A NGL + + YN+M
Sbjct: 70 NLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMML 129
Query: 65 MVG-FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
G ++ITF +++ S + G+QIH ++ K G + V S L+ MY++ G +
Sbjct: 130 KDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFI 189
Query: 124 DDSVKTF------------------LECEY-------------SDVVLWSSMIAAYGFHG 152
+D+ + F L C + D + W+++I +G
Sbjct: 190 NDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNG 249
Query: 153 KGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY 212
+EA++ F++M + F + TF S+L AC ++G + +++ + +
Sbjct: 250 LFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRT-DYQDNIFVG 308
Query: 213 TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRI 263
+ ++D+ +C + A A+ R M K N I W +L + ++ A RI
Sbjct: 309 SALLDMYCKCRNVKYAEAVFRKMRHK-NVISWTAMLVGYGQNGYSEEAVRI 358
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/208 (16%), Positives = 91/208 (43%), Gaps = 34/208 (16%)
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
+ + + C E Q +++H +++ + + + ++LI+ Y + G L ++ F
Sbjct: 8 YTAALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIP 67
Query: 135 YSDVVLWSSMIAAY-----------------------------GFHGKG--EEAINLFEQ 163
++ W+++++AY G+ G G E++ ++
Sbjct: 68 QPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNM 127
Query: 164 M-EQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRC 222
M + N +TF ++L S+ G + G + + K+ + L + +VD+ +
Sbjct: 128 MLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHG-QIFKFGYQSYLFVGSPLVDMYAKT 186
Query: 223 GYLDEAAALIRNMPVKANAIIWKTLLSA 250
G++++A + +P K N +++ T+++
Sbjct: 187 GFINDANRIFEEIPEK-NIVVYNTMITG 213
>gi|326513920|dbj|BAJ92110.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 503
Score = 348 bits (893), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 166/299 (55%), Positives = 223/299 (74%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G ++D+ G+SLAHMYM+ G L EGE V++ +P V+++ T IAG+ Q G +E L+ +
Sbjct: 204 GMDIDMCVGNSLAHMYMRCGCLAEGEAVLKALPSLTVVSFNTTIAGRTQLGDSEGALEYF 263
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
++MR VG D +TFVSVIS CS+LA L QGQQ+HA+V+KAG + VI+ L+ MYSRC
Sbjct: 264 SMMRGVGLVADVVTFVSVISCCSDLAALAQGQQVHAQVIKAGVDKVIPVITCLVHMYSRC 323
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
GCL DS + + D+ L S+MI+A GFHG+G +A+ LF+QM N+VTF++LL
Sbjct: 324 GCLGDSERVYSGYCGLDLFLLSAMISACGFHGQGHKAVELFKQMMNAGARPNEVTFLALL 383
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
YACSH GLKE+G+EFF+LM K Y +P ++HYTC+VDLLGR G LDEA ALI +MPV+A+
Sbjct: 384 YACSHSGLKEEGLEFFELMTKAYGLQPSVKHYTCIVDLLGRSGCLDEAEALILSMPVRAD 443
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
+IWKTLLSACKT K+ DMA RIAE ++ +PQD+APYVLLSNI A+++RW VSE R+
Sbjct: 444 GVIWKTLLSACKTQKNFDMAERIAERVIEFDPQDSAPYVLLSNIRATSRRWGDVSEVRK 502
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 133/288 (46%), Gaps = 5/288 (1%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y+K+ L K+ MP RNV W ++AG GL ED L + MR G PD+
Sbjct: 118 YIKNSHLGSARKLFDEMPTRNVATWNAMVAGLTNAGLDEDGLGFFLAMRREGLHPDEFGL 177
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
SV C+ L+ L G+Q+HA VV+ G +D+ V +SL MY RCGCL +
Sbjct: 178 GSVFRCCAGLSDLVSGRQVHAYVVRCGMDIDMCVGNSLAHMYMRCGCLAEGEAVLKALPS 237
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
VV +++ IA G E A+ F M A+ VTFVS++ CS +G +
Sbjct: 238 LTVVSFNTTIAGRTQLGDSEGALEYFSMMRGVGLVADVVTFVSVISCCSDLAALAQGQQV 297
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK 255
++K K + TC+V + RCG L ++ + + + ++SAC H
Sbjct: 298 HAQVIKAGVDK-VIPVITCLVHMYSRCGCLGDSERVYSGY-CGLDLFLLSAMISACGFHG 355
Query: 256 STDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
A + ++++ G P + LL S + +G+ EF E M
Sbjct: 356 QGHKAVELFKQMMNAGARPNEVTFLALLYACSHSGLKEEGL-EFFELM 402
Score = 38.5 bits (88), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 7/132 (5%)
Query: 71 DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTF 130
D F V +C + L Q+HA +GA+ D ++L+ Y+ G L + + F
Sbjct: 44 DPNLFAHVFRACRAIPLL---HQLHAFAATSGAAADRFTTNNLMLAYADLGDLPTACRLF 100
Query: 131 LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKE 190
+V+ W+ +I Y + A LF++M + N T+ +++ ++ GL E
Sbjct: 101 ERIPKPNVMSWNILIGGYIKNSHLGSARKLFDEMPTR----NVATWNAMVAGLTNAGLDE 156
Query: 191 KGMEFFDLMVKK 202
G+ FF M ++
Sbjct: 157 DGLGFFLAMRRE 168
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 348 bits (893), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 176/445 (39%), Positives = 261/445 (58%), Gaps = 25/445 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D V+ +S +++ L + + M R+V++W T+I+ AQ ++ ++ + M
Sbjct: 483 DTVSWNSFIAALVQNNMLEDARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTML 542
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+P+ ++S C L + GQQIH +K G ++ V ++L+SMY +CGC D
Sbjct: 543 HEHEKPNSPILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCGCAD 602
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
S K F E D+ W++ I HG G EAI ++E ME N+VTFV LL ACS
Sbjct: 603 -SHKVFDSMEERDIFTWNTFITGCAQHGLGREAIKMYEHMESVGVLPNEVTFVGLLNACS 661
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL ++G +FF M + Y P LEHY C+VDLLGR G + A I +MP++ + +IW
Sbjct: 662 HAGLVDEGWQFFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDTVIW 721
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
LL ACK HK+ ++ R AE++ P +A YV+LSNI++S W V+E R+ M++R
Sbjct: 722 SALLGACKIHKNAEIGRRAAEKLFTTEPSNAGNYVMLSNIYSSLGMWVEVAELRKIMKQR 781
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
V KEPG SW++I+N+VH F GDK H + EID L++L + ++ GYVPDT +HD+
Sbjct: 782 GVSKEPGCSWMQIRNKVHSFVTGDKQHEKIEEIDYTLQDLYTLLRGTGYVPDTEFVLHDI 841
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVM---LP----------------FKYISEIKN 405
D E+KE +L +HSEKLA+A+ GL+V +P K++S +
Sbjct: 842 DEEQKESSLLYHSEKLAVAY-----GLLVTPKGMPIQIMKNLRICGDCHTFIKFVSHVTK 896
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
R+I +RD +RFHHFRNG CSCGD+W
Sbjct: 897 RDIDIRDGNRFHHFRNGSCSCGDFW 921
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 136/310 (43%), Gaps = 36/310 (11%)
Query: 6 LVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRM 65
+V+ +++ YM++G + E +++ MP RN I+W +IAG AQNG +E+ LD +
Sbjct: 352 VVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHR 411
Query: 66 VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC----- 120
G P + S +CS + L G+Q+H+ VKAG + V ++LISMY +C
Sbjct: 412 NGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEY 471
Query: 121 --------------------------GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKG 154
L+D+ F DVV W+++I+AY +G
Sbjct: 472 VRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNMLSRDVVSWTTIISAYAQAERG 531
Query: 155 EEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC 214
+EA+ F+ M + + N LL C G + G + + + K+ L
Sbjct: 532 DEAVEFFKTMLHEHEKPNSPILTILLSVCGGLGSAKLGQQIHTVAI-KHGMDSELIVANA 590
Query: 215 VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAE--EILGVNP 272
++ + +CG D + + + W T ++ C H A ++ E E +GV P
Sbjct: 591 LMSMYFKCGCADSHKVF--DSMEERDIFTWNTFITGCAQHGLGREAIKMYEHMESVGVLP 648
Query: 273 QDAAPYVLLS 282
+ LL+
Sbjct: 649 NEVTFVGLLN 658
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 139/306 (45%), Gaps = 22/306 (7%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVE-GEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQ 59
GFE D+V G+S+ ++Y + S ++ K M RN W T+IA + G + +
Sbjct: 253 GFESDVVIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAV 312
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVIS--SLISMY 117
Y G P K S+ S + L L + +I + D V+S ++I+ Y
Sbjct: 313 Y------GRDPVK----SIPSQTALLTGLARCGRITEARILFEQIPDPIVVSWNAMITGY 362
Query: 118 SRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
+ G +D++ + F + + + W+ MIA Y +G+ EEA++L + + + + +
Sbjct: 363 MQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLT 422
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC--VVDLLGRCGYLDEAAALIRNM 235
S ACSH G E G + L VK + Y C ++ + G+C ++ + M
Sbjct: 423 SSFLACSHIGALETGRQVHSLAVKA---GCQFNSYVCNALISMYGKCRNMEYVRQVFNRM 479
Query: 236 PVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVS 295
VK + + W + ++A + + A I + +L +D + + + +A A+R
Sbjct: 480 RVK-DTVSWNSFIAALVQNNMLEDARHIFDNMLS---RDVVSWTTIISAYAQAERGDEAV 535
Query: 296 EFREAM 301
EF + M
Sbjct: 536 EFFKTM 541
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 119/250 (47%), Gaps = 17/250 (6%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKA---QNGLAEDVLDQYN 61
D+ + +S+ Y S +V+ + + MP RN++ W +I+G Q+G D+ +
Sbjct: 156 DVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDI---FR 212
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR-C 120
+M G PD+ F SV+S+ + L LG + + V+K G DV + +S++++Y+R
Sbjct: 213 MMHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDA 272
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
LD ++K F + WS+MIAA G+ + AI ++ + K + +LL
Sbjct: 273 SALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYGRDPVKSIPSQ----TALL 328
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
+ CG + F+ + P + + ++ + G +DEA L MP + N
Sbjct: 329 TGLARCGRITEARILFEQI-----PDPIVVSWNAMITGYMQNGMVDEAKELFDRMPFR-N 382
Query: 241 AIIWKTLLSA 250
I W +++
Sbjct: 383 TISWAGMIAG 392
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 88/197 (44%), Gaps = 14/197 (7%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
LD A S+ + G L E +V MP R++IAW ++I+ +G+ ED ++ +
Sbjct: 31 LDKSAHSARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAI 90
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAG-ASLDVGVISSLISMYSRCGC 122
R I ++S + L G+ + A V G + ++++S Y + G
Sbjct: 91 SGGNVRTATI----LLSGYARL-----GRVLDARRVFDGMPERNTVAWNAMVSCYVQNGD 141
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
+ + + F DV W+SM+ Y + +A NLF+QM Q+ N VT+ ++
Sbjct: 142 ITMARRLFDAMPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQR----NLVTWTVMISG 197
Query: 183 CSHCGLKEKGMEFFDLM 199
KG + F +M
Sbjct: 198 YVRIEQHGKGWDIFRMM 214
>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
Length = 822
Score = 348 bits (893), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 182/437 (41%), Positives = 267/437 (61%), Gaps = 26/437 (5%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRM-VG 67
G++L MY +SG + E +V + R++I+ IT D + + RM +G
Sbjct: 397 GNALVSMYAESGCMEEARRVFNQLYERSMISCITE---------GRDAPLDHRIGRMDMG 447
Query: 68 FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV 127
TF S+IS+ + + L +GQQ+HA +KAG D V +SL+SMYSRCG L+D+
Sbjct: 448 ISSS--TFASLISAAASVGMLTKGQQLHAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDAC 505
Query: 128 KTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCG 187
++F E + +V+ W+SMI+ HG E A++LF M + NDVT++++L ACSH G
Sbjct: 506 RSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVG 565
Query: 188 LKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTL 247
L +G E+F M + + PR+EHY C+VDLL R G + EA I MP+KA+A++WKTL
Sbjct: 566 LVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGLVKEALEFINEMPLKADALVWKTL 625
Query: 248 LSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVK 307
L AC++H + ++ A+ ++ + P+D APYVLLSN++A A W V+ R AMR+ N+
Sbjct: 626 LGACRSHDNIEVGEIAAKNVIELEPRDPAPYVLLSNLYADAGLWDEVARIRSAMRDNNLN 685
Query: 308 KEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSE 367
KE G+SW+E++N H+F GD SHPR+ +I L+ L E+K GYVPDT +HDM E
Sbjct: 686 KETGLSWMEVENTTHEFRAGDTSHPRAQDIYGKLDTLVGEIKGMGYVPDTSIVLHDMSDE 745
Query: 368 EKEYNLKHHSEKLAIAFAEHT----------RGLIVML----PFKYISEIKNREIIVRDA 413
KE L HSEK+A+AF T + L V KY+S+ REII+RD+
Sbjct: 746 LKEQYLLQHSEKIAVAFGLITTSAPKPIRIFKNLRVCADCHSAIKYMSKATRREIILRDS 805
Query: 414 SRFHHFRNGKCSCGDYW 430
+RFH ++G+CSCG+YW
Sbjct: 806 NRFHRMKDGECSCGEYW 822
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 131/279 (46%), Gaps = 12/279 (4%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ GS+L M ++G L KV + + V+ W LI+ Q AE+ ++ +
Sbjct: 187 DIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFLDFL 246
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG--- 121
GF PD+ T S+IS+C+EL ++ G Q+H+ ++ G + D V L+ MY++
Sbjct: 247 EDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKSNIEQ 306
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAIN-LFEQMEQKEFEANDVTFVSLL 180
+D + K F +DV+ W+++I+ Y G E + LF +M + + N +T+ S+L
Sbjct: 307 AMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSIL 366
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC++ + G + ++K + +V + G ++EA + N
Sbjct: 367 KACANISDHDSGRQVHAHVIKSNQAAAHTVG-NALVSMYAESGCMEEARRVF-------N 418
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYV 279
+ ++++S + + RI +G++ A +
Sbjct: 419 QLYERSMISCITEGRDAPLDHRIGRMDMGISSSTFASLI 457
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 94/178 (52%), Gaps = 15/178 (8%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D +SL MY + G L + + + RNVI+W ++I+G A++G AE L +
Sbjct: 480 GFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLF 539
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVI------SSLI 114
+ M + G +P+ +T+++V+S+CS + + +G++ + + D G+I + ++
Sbjct: 540 HDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQR-----DHGLIPRMEHYACMV 594
Query: 115 SMYSRCGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGK---GEEAINLFEQMEQKE 168
+ +R G + ++++ E +D ++W +++ A H GE A ++E ++
Sbjct: 595 DLLARSGLVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEIAAKNVIELEPRD 652
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 3/203 (1%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLM-PIRNVIAWITLIAGKAQNGLAEDVLDQY 60
+ D V +SL +Y + G++ V M +R++++W + + A+NG + L
Sbjct: 80 LDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARNGAERESLLLI 139
Query: 61 NLMRMVGFRPDKITFVSVISSC--SELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
M G P+ T +V +C EL L G + D+ V S+LI M +
Sbjct: 140 GEMLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKMGLWGTDIAVGSALIDMLA 199
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
R G L + K F VV+W+ +I+ Y EEA+ +F + FE + T S
Sbjct: 200 RNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFLDFLEDGFEPDRYTMSS 259
Query: 179 LLYACSHCGLKEKGMEFFDLMVK 201
++ AC+ G G++ L ++
Sbjct: 260 MISACTELGSVRLGLQLHSLALR 282
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 76/173 (43%), Gaps = 26/173 (15%)
Query: 91 GQQIHAEVVKAGA-SLDVGVISSLISMYSRCGCLDDSVKTFLECE-YSDVVLWSSMIAAY 148
G+ +H +++ D V +SL+++YSRCG + + F D+V W++M +
Sbjct: 67 GRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCL 126
Query: 149 GFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS----HCGLK--------EKGMEFF 196
+G E++ L +M + N T ++ +AC +C + + G+
Sbjct: 127 ARNGAERESLLLIGEMLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKMGLWGT 186
Query: 197 DLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
D+ V + ++D+L R G L A + + ++ ++W L+S
Sbjct: 187 DIAVG-----------SALIDMLARNGDLASARKVFDGL-IEKTVVVWTLLIS 227
>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Vitis vinifera]
Length = 631
Score = 348 bits (892), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 180/445 (40%), Positives = 271/445 (60%), Gaps = 24/445 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+V + + Y++ G L + MP R+V++W +IAG AQ+G ++ ++ + M+
Sbjct: 192 DVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQ 251
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
M P+ +T VSV+ + S L L G+ +H V+ +D + S+LI MY++CG ++
Sbjct: 252 MAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIE 311
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+++ F +VV WS++IA HG+ ++ ++ FE ME+ +DVT++ LL ACS
Sbjct: 312 KALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSACS 371
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL +G FFD MV+ +PR+EHY C+VDLLGR G L+E+ LI NMP+K + +IW
Sbjct: 372 HAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVIW 431
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
K LL ACK H + +M R+AE ++ + P D+ YV LSNI+AS W+GV++ R M+E
Sbjct: 432 KALLGACKMHGNVEMGKRVAEHLMELAPHDSGSYVALSNIYASLGNWEGVAKVRLMMKEM 491
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
+V+K+PG SW+E+ +H+F + D SHP+S +I L+E++ + L GY P+T + +M
Sbjct: 492 DVRKDPGCSWIELDGVIHEFLVEDDSHPKSKKIHSMLQEMSRNLILVGYRPNTTQVLTNM 551
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKN 405
D E+KE +L +HSEK+AIAF GLI P K IS+I
Sbjct: 552 DEEDKESSLNYHSEKIAIAF-----GLISTQPQTPLRITKNLRICEDCHSSIKLISKIYK 606
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
R+IIVRD RFHHF NG CSC DYW
Sbjct: 607 RKIIVRDRKRFHHFVNGSCSCMDYW 631
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 126/307 (41%), Gaps = 51/307 (16%)
Query: 25 GEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY-NLMRMVGFRPDKITFVSVISSCS 83
K+ R M N ++ TLI +++ D L + ++ P+ TF SV +C
Sbjct: 64 ARKIFRSMHRPNCFSYNTLIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACG 123
Query: 84 ELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSD------ 137
L +G+Q+H VK G D V+S+++ MY CG ++D+ + F + D
Sbjct: 124 RAERLREGRQVHGLAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIR 183
Query: 138 ----------------------------------------VVLWSSMIAAYGFHGKGEEA 157
VV W+ MIA Y G +EA
Sbjct: 184 DKKRRVDGDVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEA 243
Query: 158 INLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVD 217
+ +F +M+ E N VT VS+L A S G E G ++ L + + ++D
Sbjct: 244 VEVFREMQMAEVPPNYVTLVSVLPAMSRLGALELG-KWVHLYAVRNNIGVDDVLGSALID 302
Query: 218 LLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH-KSTDMAGRIAE-EILGVNPQDA 275
+ +CG +++A + +P K N + W T+++ H ++ D + E GV P D
Sbjct: 303 MYAKCGSIEKALQVFEGLP-KRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDV 361
Query: 276 APYVLLS 282
LLS
Sbjct: 362 TYIGLLS 368
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 93/182 (51%), Gaps = 3/182 (1%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
+D V GS+L MY K GS+ + +V +P RNV+ W T+IAG A +G A+D LD + M
Sbjct: 292 VDDVLGSALIDMYAKCGSIEKALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDM 351
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVK-AGASLDVGVISSLISMYSRCGC 122
G P +T++ ++S+CS + +G+ +V+ +G + ++ + R G
Sbjct: 352 ERAGVMPSDVTYIGLLSACSHAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGL 411
Query: 123 LDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQ-MEQKEFEANDVTFVSLL 180
L++S + L D V+W +++ A HG E + E ME ++ +S +
Sbjct: 412 LEESEELILNMPIKPDDVIWKALLGACKMHGNVEMGKRVAEHLMELAPHDSGSYVALSNI 471
Query: 181 YA 182
YA
Sbjct: 472 YA 473
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 348 bits (892), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 176/446 (39%), Positives = 263/446 (58%), Gaps = 18/446 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ DL G++L +Y + G + + ++ I+W LI+G AQ+G E+ L +
Sbjct: 546 GYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVF 605
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M G + TF S +S+ + A + QG+QIHA ++K G + + LI++YS+C
Sbjct: 606 SQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASNVLITLYSKC 665
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++D+ + F E +VV W++MI Y HG G EA++LFE+M+Q N VTFV +L
Sbjct: 666 GSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVL 725
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL +G+ +F M K++ P+ EHY CVVDLLGR L A I MP++ +
Sbjct: 726 SACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCAREFIEEMPIEPD 785
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A+IW+TLLSAC HK+ ++ A +L + P+D+A YVLLSN++A + +W R+
Sbjct: 786 AMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYVLLSNMYAVSGKWDYRDRTRQM 845
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M++R VKKEPG SW+E+KN +H F +GD+ HP + +I Y+++L GYV D
Sbjct: 846 MKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQIYEYIDDLNERAGEIGYVQDRYNL 905
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP----------------FKYISEIK 404
++D++ E+K+ HSEKLA+AF L +P K++S+I
Sbjct: 906 LNDVEQEQKDPTAYIHSEKLAVAFG--LLSLTNTMPIRVIKNLRVCNDCHNWIKFVSKIS 963
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
NR I+VRDA RFHHF G CSC DYW
Sbjct: 964 NRAIVVRDAYRFHHFEGGVCSCKDYW 989
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 156/312 (50%), Gaps = 4/312 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ ++ S L MY K G L +++ + +V++W +IAG Q+ L + L +
Sbjct: 445 GFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLF 504
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G R D I F S IS+C+ + L QGQQIHA+ +G S D+ + ++L+S+Y+RC
Sbjct: 505 QEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARC 564
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G D+ F + + D + W+++I+ + G EEA+ +F QM Q EAN TF S +
Sbjct: 565 GRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAV 624
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
A ++ ++G + +M+K E ++ L +CG +++A MP K N
Sbjct: 625 SATANTANIKQGKQIHAMMIKT-GYDSETEASNVLITLYSKCGSIEDAKREFFEMPEK-N 682
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
+ W +++ H A + EE+ LG+ P +LS +G+S FR
Sbjct: 683 VVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSACSHVGLVNEGLSYFR 742
Query: 299 EAMRERNVKKEP 310
+E + +P
Sbjct: 743 SMSKEHGLVPKP 754
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 143/269 (53%), Gaps = 6/269 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + ++L +Y + G+L+ E++ M R+ I++ +LI+G AQ G ++ L +
Sbjct: 243 GLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLF 302
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M++ +PD +T S++S+C+ + +G+Q+H+ V+K G S D+ + SL+ +Y +C
Sbjct: 303 EKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKC 362
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
++ + + FL E +VVLW+ M+ AYG G E+ +F QM+ + N T+ S+L
Sbjct: 363 FDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSIL 422
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC--VVDLLGRCGYLDEAAALIRNMPVK 238
C+ G + G + ++K + Y C ++D+ + G LD A +++ + +
Sbjct: 423 RTCTSLGALDLGEQIHTQVIKS---GFQFNVYVCSVLIDMYAKHGELDTARGILQRLR-E 478
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEI 267
+ + W +++ H A ++ +E+
Sbjct: 479 EDVVSWTAMIAGYTQHDLFAEALKLFQEM 507
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 117/251 (46%), Gaps = 4/251 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G DL+ SL +Y+K + + NV+ W ++ Q G + +
Sbjct: 344 GMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIF 403
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M++ G P++ T+ S++ +C+ L L G+QIH +V+K+G +V V S LI MY++
Sbjct: 404 LQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKH 463
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G LD + DVV W++MIA Y H EA+ LF++ME + ++++ F S +
Sbjct: 464 GELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAI 523
Query: 181 YACSHCGLKEKGMEFF-DLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
AC+ +G + + Y L +V L RCG +A + K
Sbjct: 524 SACAGIQALNQGQQIHAQSYISGYSED--LSIGNALVSLYARCGRAQDAYLAFEKIDAKD 581
Query: 240 NAIIWKTLLSA 250
N I W L+S
Sbjct: 582 N-ISWNALISG 591
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 126/250 (50%), Gaps = 2/250 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF + + L +Y K+G + + V + +++ ++W+ +I+G +QNG ++ + +
Sbjct: 142 GFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLF 201
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M P F SV+S+C+++ G+Q+H +VK G S + V ++L+++YSR
Sbjct: 202 CQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRW 261
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L + + F + D + ++S+I+ G + A+ LFE+M+ + + VT SLL
Sbjct: 262 GNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLL 321
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+ G KG + ++K + + ++DL +C ++ A + N
Sbjct: 322 SACASVGAGYKGKQLHSYVIKMGMSSDLIIEGS-LLDLYVKCFDIETAHEYFLTTETE-N 379
Query: 241 AIIWKTLLSA 250
++W +L A
Sbjct: 380 VVLWNVMLVA 389
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 126/288 (43%), Gaps = 36/288 (12%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ + V GS L +Y+ G + K+ +P NV W +I+G LA VL +
Sbjct: 40 GFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLF 99
Query: 61 NLMRMVGFRPDKITFVSVISSCSE-LATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+LM PD+ TF SV+ +CS A +QIHA+++ G V + LI +YS+
Sbjct: 100 SLMITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSK 159
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G +D + F D V W +MI+ +G+ +EAI LF QM + F S+
Sbjct: 160 NGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSV 219
Query: 180 LYACSHCGLKEKGMEFFDLMVK-------------------------------KYRRKPR 208
L AC+ L + G + +VK K R+ R
Sbjct: 220 LSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDR 279
Query: 209 LEHYTCVVDLLGRCGYLDEAAALIRNMPV---KANAIIWKTLLSACKT 253
+ Y ++ L + G+ D A L M + K + + +LLSAC +
Sbjct: 280 IS-YNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACAS 326
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 100/233 (42%), Gaps = 22/233 (9%)
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
G R + T++ + C +L +++HA + K+G + + S LI +Y G +D++
Sbjct: 5 GIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNA 64
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHC 186
+K F + S+V W+ +I+ + + LF M + ++ TF S+L ACS
Sbjct: 65 IKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACS-- 122
Query: 187 GLKEKGMEFFDLMVKKYRRKPRLEHYTC--VVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
G K + K C ++DL + G++D A + + +K +++ W
Sbjct: 123 GGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLK-DSVSW 181
Query: 245 KTLLSACKTHKSTDMAGRIAEEIL--------GVNPQDAAPYVLLSNIHASAK 289
++S + GR E IL V P PYV S + A K
Sbjct: 182 VAMISGLSQN------GREDEAILLFCQMHKSAVIP---TPYVFSSVLSACTK 225
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 348 bits (892), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 173/440 (39%), Positives = 261/440 (59%), Gaps = 14/440 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D++ + + +K G K+ MP RNV +W ++I G AQ G +++ +D + M
Sbjct: 178 DVITWNIMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEME 237
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G P+++T V+V+ +C+++ L G++IH ++G ++ V ++LI MY +CGCL+
Sbjct: 238 DAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLE 297
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D+ + F E VV WS+MIA HG+ E+A+ LF +M + N VTF+ +L+ACS
Sbjct: 298 DACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACS 357
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H G+ EKG ++F M + Y PR+EHY C+VDL R G L EA I NMP+ N ++W
Sbjct: 358 HMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVW 417
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
LL CK HK+ +A + ++P + YV+LSNI+A A RW+ V+ R+ MR+R
Sbjct: 418 GALLGGCKVHKNIKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDR 477
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
VKK PG S + ++ V+ F GD +HP++ EI E+L MKL+GYVP+T + DM
Sbjct: 478 GVKKTPGWSSIMVEGVVYNFVAGDDTHPQTEEIFQTWEKLLQRMKLKGYVPNTSVVLLDM 537
Query: 365 DSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNREIIV 410
+ ++KE L HSEKLA+ F + T G ++ + K IS + REI+V
Sbjct: 538 EEDQKEKFLYRHSEKLAVVFGLIKTTPGTVIRIMKNLRVCEDCHAALKIISVVSTREIVV 597
Query: 411 RDASRFHHFRNGKCSCGDYW 430
RD +RFH F+NG CSCGDYW
Sbjct: 598 RDRNRFHCFKNGSCSCGDYW 617
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 125/298 (41%), Gaps = 37/298 (12%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
S +A + + S + + +L+ V W T + A+ D + + +R
Sbjct: 51 SRVASVCAFNSSFSYAKLIFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDIS 110
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
PD T V+ +CS L + G+ +H V K G ++ + + ++ +Y+ CG + + K
Sbjct: 111 PDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKV 170
Query: 130 FLECEYSDVVLW-------------------------------SSMIAAYGFHGKGEEAI 158
F + DV+ W +SMI Y GK +EAI
Sbjct: 171 FDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAI 230
Query: 159 NLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKK-YRRKPRLEHYTCVVD 217
+LF +ME N+VT V++L AC+ G G D + Y + R+ ++D
Sbjct: 231 DLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRV--CNTLID 288
Query: 218 LLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQ 273
+ +CG L++A + NM + + W +++ H + A + +++ GV P
Sbjct: 289 MYVKCGCLEDACRIFDNMEER-TVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPN 345
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 95/189 (50%), Gaps = 19/189 (10%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+E ++ ++L MY+K G L + ++ M R V++W +IAG A +G AED L +
Sbjct: 275 GYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALF 334
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVI------SSLI 114
N M G +P+ +TF+ ++ +CS + + +G++ A + + D G++ ++
Sbjct: 335 NKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTR-----DYGIVPRIEHYGCMV 389
Query: 115 SMYSRCGCLDDSVKTFLECEYS-DVVLWSSMIAAYGFHGK---GEEAINLFEQMEQKEFE 170
++SR G L ++ + + + + V+W +++ H EEA +++
Sbjct: 390 DLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHKNIKLAEEATRHLSKLD----P 445
Query: 171 ANDVTFVSL 179
ND +V L
Sbjct: 446 LNDGYYVVL 454
>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 348 bits (892), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 182/449 (40%), Positives = 269/449 (59%), Gaps = 32/449 (7%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY-NLMRMVG 67
GS+L MY + G +V + R + W +I+G A+NGL E L + ++++ G
Sbjct: 253 GSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAG 312
Query: 68 FRPDKITFVSVISSC-SELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
P+ T SV+ +C LA + +G++IHA ++ + D+ V S+L+ MY++CGCL+ S
Sbjct: 313 LLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLS 372
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQK-----EFEANDVTFVSLLY 181
+ F E +V+ W+ +I A G HGKGEEA+ LF+ M + E + N+VTF+++
Sbjct: 373 RRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFA 432
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
ACSH GL +G+ F M + +P +HY CVVDLLGR G L+EA L+ MP + +
Sbjct: 433 ACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDK 492
Query: 242 I-IWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+ W +LL AC+ H++ ++ A+ +L + P A+ YVLLSNI++SA W E R+
Sbjct: 493 VGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKN 552
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
MR+ VKKEPG SW+E +++VH+F GD SHP+S ++ +LE L+ +M+ GYVPDT
Sbjct: 553 MRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETLSEKMRKEGYVPDTSCV 612
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
+H++D +EKE L HSEKLAIAF G++ P K+IS
Sbjct: 613 LHNVDEDEKENLLCGHSEKLAIAF-----GILNTPPGTTIRVAKNLRVCNDCHAATKFIS 667
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+I REIIVRD RFHHF+ G CSCGDYW
Sbjct: 668 KIMEREIIVRDVRRFHHFKEGTCSCGDYW 696
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 122/248 (49%), Gaps = 5/248 (2%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L MY K G + + + + R++++W T+I+ +Q+ + L + LM + G
Sbjct: 152 NALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVE 211
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVI-SSLISMYSRCGCLDDSVK 128
D +T SV+ +CS L L G++IHA V++ ++ + S+L+ MY C ++ +
Sbjct: 212 LDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRR 271
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLF-EQMEQKEFEANDVTFVSLLYACSHC- 186
F + LW++MI+ Y +G E+A+ LF E ++ N T S++ AC H
Sbjct: 272 VFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSL 331
Query: 187 GLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKT 246
KG E ++ + + +VD+ +CG L+ + + MP K N I W
Sbjct: 332 AAIAKGKEIHAYAIRNMLAS-DITVGSALVDMYAKCGCLNLSRRVFNEMPNK-NVITWNV 389
Query: 247 LLSACKTH 254
L+ AC H
Sbjct: 390 LIMACGMH 397
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 21/174 (12%)
Query: 33 PIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQ 92
P R+ +W+ + + ++ + + Y M + G RPD F +V+ + S L L G+
Sbjct: 53 PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112
Query: 93 QIHAEVVKAG-ASLDVGVISSLISMYSRCGCL--------------------DDSVKTFL 131
QIHA VK G S V V ++L++MY +CG + DDS F
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFE 172
Query: 132 ECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
D+V W++MI+++ + EA+ F M + E + VT S+L ACSH
Sbjct: 173 SFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSH 226
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 15/201 (7%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY-NLM 63
D+ GS+L MY K G L +V MP +NVI W LI +G E+ L+ + N++
Sbjct: 352 DITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMV 411
Query: 64 RMVG----FRPDKITFVSVISSCSELATLGQGQQIHAEVV-KAGASLDVGVISSLISMYS 118
G +P+++TF++V ++CS + +G + + G + ++ +
Sbjct: 412 AEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLG 471
Query: 119 RCGCLDDSVK--TFLECEYSDVVLWSSMIAAYGFHGK---GEEAINLFEQMEQKEFEAND 173
R G L+++ + + E+ V WSS++ A H GE A +E A+
Sbjct: 472 RAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPN--VASH 529
Query: 174 VTFVSLLYACSHCGLKEKGME 194
+S +Y S GL K ME
Sbjct: 530 YVLLSNIY--SSAGLWNKAME 548
>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 823
Score = 347 bits (891), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 179/449 (39%), Positives = 264/449 (58%), Gaps = 24/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+E +L G++L MY K ++ ++ + N ++W T+I G Q+G AED L +
Sbjct: 380 GYESELFVGNALMDMYAKCRNMENSLEIFSSLQDANEVSWNTIIVGYCQSGFAEDALSVF 439
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ MR ++TF SV+ +C+ +++ QIH+ + K+ + D V +SLI Y++C
Sbjct: 440 HEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKC 499
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + D++K F DVV W+S+I+AY HG+ A+ LF++M + + +ANDVTFVSLL
Sbjct: 500 GFIRDALKVFESIVECDVVSWNSIISAYALHGRATNALELFDRMNKSDIKANDVTFVSLL 559
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
C GL +G+ F+ M+ +R KP +EHYTC+V LLGR G L +A I ++P +
Sbjct: 560 SVCGSTGLVNQGLWLFNSMMMDHRIKPSMEHYTCIVRLLGRAGRLTDALKFIGDIPSTPS 619
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
++W+ LLS+C HK+ + AE++L + P D YVLLSN++A+A V+ +R++
Sbjct: 620 PMVWRALLSSCVVHKNVALGRYAAEKVLDIEPHDETTYVLLSNMYAAAGILDEVALWRKS 679
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
MR VKKE G+SW+EIK +VH F++G HP I+ LE L + GYVPD
Sbjct: 680 MRNVGVKKEAGLSWVEIKGEVHAFSVGSADHPDMRIINAMLEWLNLKASREGYVPDINVV 739
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
+HD+D EEK L HSE+LA+A+ GL + P FK IS
Sbjct: 740 LHDVDEEEKARMLWVHSERLALAY-----GLSMTPPGHPIRIMKNLRSCLDCHTMFKVIS 794
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+I REIIVRD +RFHHF G CSCGDYW
Sbjct: 795 KIVQREIIVRDINRFHHFEEGICSCGDYW 823
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 148/301 (49%), Gaps = 4/301 (1%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G +L MY K G + + + ++P +VI W LI+ AQ+ E + + M
Sbjct: 287 GGALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFV 346
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
P++ + V+ +C+ +A L G+QIH +K G ++ V ++L+ MY++C +++S++
Sbjct: 347 VPNEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLE 406
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F + ++ V W+++I Y G E+A+++F +M + VTF S+L AC++
Sbjct: 407 IFSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSS 466
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
+ ++ L+ K + + ++D +CG++ +A + ++ V+ + + W +++
Sbjct: 467 IKHAVQIHSLIEKSTFNNDTIVCNS-LIDTYAKCGFIRDALKVFESI-VECDVVSWNSII 524
Query: 249 SACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNV 306
SA H A + + + + D LLS ++ QG+ F M + +
Sbjct: 525 SAYALHGRATNALELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRI 584
Query: 307 K 307
K
Sbjct: 585 K 585
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 122/248 (49%), Gaps = 2/248 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + + G++L Y G++ V + ++ + W +++ ++N + E L+ +
Sbjct: 178 GHDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTF 237
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ MRM GF+P+ S + + L++ G+ IH VK + V +L+ MY++C
Sbjct: 238 SKMRMTGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKC 297
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++D+ F + DV+LWS +I+ Y + E+A +F +M + N+ + +L
Sbjct: 298 GDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVL 357
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC++ E G + +L + K + L ++D+ +C ++ + + ++ AN
Sbjct: 358 QACANIAFLELGEQIHNLAI-KLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQ-DAN 415
Query: 241 AIIWKTLL 248
+ W T++
Sbjct: 416 EVSWNTII 423
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 125/276 (45%), Gaps = 12/276 (4%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
+LD + L + Y K G L ++ MP RN ++++TL+ G A G E+ L+ +
Sbjct: 79 QLDTFCANVLLNFYAKLGPLATARRLFDGMPERNRVSFVTLMQGYALRGEFEEALELFRR 138
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
++ G + +++ + G IHA K G + V ++LI YS CG
Sbjct: 139 LQREGHEVNHFVLTTILKVLVTMDAPGLACGIHACACKLGHDRNAFVGTALIDAYSLCGA 198
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
+ + F D V W++M++ Y + E A+N F +M F+ N S L A
Sbjct: 199 VCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKA 258
Query: 183 --CSHCGLKEKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
C L KG+ VK Y +P + ++D+ +CG +++A A+ +P
Sbjct: 259 AVCLSSALLGKGIH--GCSVKTLYDTEPHVG--GALLDMYAKCGDIEDAHAIFEMIP-HD 313
Query: 240 NAIIWKTLLS----ACKTHKSTDMAGRIAEEILGVN 271
+ I+W L+S +C+ ++ +M R+ + N
Sbjct: 314 DVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPN 349
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 89/216 (41%), Gaps = 39/216 (18%)
Query: 91 GQQIHAEVVKAG--ASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAY 148
G+ +HA VV+ G A LD + L++ Y++ G L + + F + V + +++ Y
Sbjct: 64 GRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATARRLFDGMPERNRVSFVTLMQGY 123
Query: 149 GFHGKGEEAINLFEQMEQKEFEANDVTFVSLL---------------YACSHCGLKEKGM 193
G+ EEA+ LF +++++ E N ++L +AC+ C L
Sbjct: 124 ALRGEFEEALELFRRLQREGHEVNHFVLTTILKVLVTMDAPGLACGIHACA-CKLGHDRN 182
Query: 194 EFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKT 253
F T ++D CG + A + + V +A+ W ++S
Sbjct: 183 AFVG---------------TALIDAYSLCGAVCHARCVFDGI-VGKDAVTWTAMVSCYSE 226
Query: 254 HKSTDMAGRIAEE--ILGVNPQDAAPYVLLSNIHAS 287
+ + A + + G P P+VL S + A+
Sbjct: 227 NDIPEYALNTFSKMRMTGFKPN---PFVLTSALKAA 259
>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
Length = 822
Score = 347 bits (891), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 182/437 (41%), Positives = 267/437 (61%), Gaps = 26/437 (5%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRM-VG 67
G++L MY +SG + E +V + R++I IT D + ++RM VG
Sbjct: 397 GNALVSMYAESGCMEEARRVFNQLYERSMIPCITE---------GRDFPLDHRIVRMDVG 447
Query: 68 FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV 127
TF S+IS+ + + L +GQQ+HA +KAG D V +SL+SMYSRCG L+D+
Sbjct: 448 ISSS--TFASLISAAASVGMLTKGQQLHAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDAC 505
Query: 128 KTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCG 187
++F E + +V+ W+SMI+ HG E A++LF M + NDVT++++L ACSH G
Sbjct: 506 RSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVG 565
Query: 188 LKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTL 247
L +G E+F M + + PR+EHY C+VDLL R G + EA I MP+KA+A++WKTL
Sbjct: 566 LVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGIVKEALEFINEMPLKADALVWKTL 625
Query: 248 LSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVK 307
L AC++H + ++ A+ ++ + P+D APYVLLSN++A A W V+ R AMR+ N+
Sbjct: 626 LGACRSHDNIEVGEITAKNVVELEPRDPAPYVLLSNLYADAGLWDEVARIRSAMRDNNLN 685
Query: 308 KEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSE 367
KE G+SW+E++N H+F GD SHPR+ +I L+ L ++K GYVPDT +HDM E
Sbjct: 686 KETGLSWMEVENTTHEFRAGDTSHPRAQDIYGKLDTLVRQIKGMGYVPDTSIVLHDMSDE 745
Query: 368 EKEYNLKHHSEKLAIAFAEHT----------RGLIVML----PFKYISEIKNREIIVRDA 413
KE L HSEK+A+AF T + L V KY+S+ REII+RD+
Sbjct: 746 LKEQYLLQHSEKIAVAFGLITTSAPKPIRIFKNLRVCADCHSAIKYMSKATRREIILRDS 805
Query: 414 SRFHHFRNGKCSCGDYW 430
+RFH ++G+CSCG+YW
Sbjct: 806 NRFHRMKDGECSCGEYW 822
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 103/201 (51%), Gaps = 4/201 (1%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ GS+L M ++G L KV + + V+ W LI+ Q AE+ ++ +
Sbjct: 187 DVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFLDFL 246
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG--- 121
GF PD+ T S+IS+C+EL ++ G Q+H+ ++ G + D V L+ MY++
Sbjct: 247 EDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNIGQ 306
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAI-NLFEQMEQKEFEANDVTFVSLL 180
+D + K F +DV+ W+++I+ Y G E + LF +M + + N +T+ S+L
Sbjct: 307 AMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSIL 366
Query: 181 YACSHCGLKEKGMEFFDLMVK 201
+C+ + G + ++K
Sbjct: 367 KSCASISDHDSGRQVHAHVIK 387
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 86/158 (54%), Gaps = 12/158 (7%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D +SL MY + G L + + + RNVI+W ++I+G A++G AE L +
Sbjct: 480 GFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLF 539
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVI------SSLI 114
+ M + G +P+ +T+++V+S+CS + + +G++ + + D G+I + ++
Sbjct: 540 HDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQR-----DHGLIPRMEHYACMV 594
Query: 115 SMYSRCGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFH 151
+ +R G + ++++ E +D ++W +++ A H
Sbjct: 595 DLLARSGIVKEALEFINEMPLKADALVWKTLLGACRSH 632
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 109/259 (42%), Gaps = 16/259 (6%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLM-PIRNVIAWITLIAGKAQNGLAEDVLDQY 60
+ D V +SL +Y + G++ V M +R++++W + + A+NG L
Sbjct: 80 LDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARNGAERGSLLLI 139
Query: 61 NLMRMVGFRPDKITFVSVISSC--SELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
M G P+ T + +C EL L G + DV V S+LI M +
Sbjct: 140 GEMLESGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVHKMGLWGTDVAVGSALIDMLA 199
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
R G L + K F VV+W+ +I+ Y EEA+ LF + FE + T S
Sbjct: 200 RNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFLDFLEDGFEPDRYTMSS 259
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV----VDLLGRCGY---LDEAAAL 231
++ AC+ G G++ L ++ L CV VD+ + +D A +
Sbjct: 260 MISACTELGSVRLGLQLHSLALRM-----GLASDACVSCGLVDMYAKSNIGQAMDYANKV 314
Query: 232 IRNMPVKANAIIWKTLLSA 250
MP K + I W L+S
Sbjct: 315 FERMP-KNDVISWTALISG 332
>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g24000, mitochondrial; Flags: Precursor
gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
Length = 633
Score = 347 bits (891), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 176/444 (39%), Positives = 265/444 (59%), Gaps = 15/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ ++ GS+L +Y + G + + + V + RN ++W LIAG A+ E L+ +
Sbjct: 191 GFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELF 250
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M GFRP ++ S+ +CS L QG+ +HA ++K+G L ++L+ MY++
Sbjct: 251 QGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKS 310
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + D+ K F DVV W+S++ AY HG G+EA+ FE+M + N+++F+S+L
Sbjct: 311 GSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVL 370
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL ++G +++LM KK P HY VVDLLGR G L+ A I MP++
Sbjct: 371 TACSHSGLLDEGWHYYELM-KKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPT 429
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A IWK LL+AC+ HK+T++ AE + ++P D P+V+L NI+AS RW + R+
Sbjct: 430 AAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKK 489
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+E VKKEP SW+EI+N +H F D+ HP+ EI EE+ +++K GYVPDT
Sbjct: 490 MKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHV 549
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAE---------HTRGLIVM-----LPFKYISEIKNR 406
+ +D +E+E NL++HSEK+A+AFA H + I + K S++ R
Sbjct: 550 IVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGR 609
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EIIVRD +RFHHF++G CSC DYW
Sbjct: 610 EIIVRDTNRFHHFKDGNCSCKDYW 633
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 139/275 (50%), Gaps = 4/275 (1%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F D+V G++L +MY K GSL E KV MP R+ + W TLI+G +Q+ D L +N
Sbjct: 91 FRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFN 150
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M G+ P++ T SVI + + G Q+H VK G +V V S+L+ +Y+R G
Sbjct: 151 QMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYG 210
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+DD+ F E + V W+++IA + E+A+ LF+ M + F + ++ SL
Sbjct: 211 LMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFG 270
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
ACS G E+G M+K + T ++D+ + G + +A + + K +
Sbjct: 271 ACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNT-LLDMYAKSGSIHDARKIFDRL-AKRDV 328
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQD 274
+ W +LL+A H A EE+ +G+ P +
Sbjct: 329 VSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNE 363
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 102/209 (48%), Gaps = 14/209 (6%)
Query: 71 DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTF 130
D+ + +++ C+ L QG+ +HA ++++ D+ + ++L++MY++CG L+++ K F
Sbjct: 59 DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118
Query: 131 LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH----- 185
+ D V W+++I+ Y H + +A+ F QM + + N+ T S++ A +
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC 178
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
CG + G K + + ++DL R G +D+A + + + N + W
Sbjct: 179 CGHQLHG------FCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESR-NDVSWN 231
Query: 246 TLLSACKTHKSTDMAGRIAEEIL--GVNP 272
L++ T+ A + + +L G P
Sbjct: 232 ALIAGHARRSGTEKALELFQGMLRDGFRP 260
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 347 bits (891), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 175/446 (39%), Positives = 264/446 (59%), Gaps = 18/446 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ D+ ++L ++Y + G E + R + ++ I W LI+G Q+ L + L +
Sbjct: 477 GYAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVF 536
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G + + TF+S IS+ + LA + QG+Q+H VK G + + V ++LIS+Y +C
Sbjct: 537 MKMGQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKC 596
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++D+ F E + V W+++I + HG+G EA++LF+QM+Q+ + NDVTF+ +L
Sbjct: 597 GSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVL 656
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL E+G+ +F M Y P +HY CVVD+LGR G LD A + MP+ AN
Sbjct: 657 AACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITAN 716
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A+IW+TLLSACK HK+ ++ A+ +L + P D+A YVLLSN +A +W + R+
Sbjct: 717 AMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKM 776
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M++R ++KEPG SW+E+KN VH F +GD+ HP S +I +L EL + GY +
Sbjct: 777 MKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDRLSKIGYKQENPNL 836
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPFKYI----------------SEIK 404
H+ + E+K+ HSEKLA+AF T L +P + I SE+
Sbjct: 837 FHEKEQEQKDPTAFVHSEKLAVAFGLMT--LPPCIPLRVIKNLRVCDDCHSWMKCTSEVT 894
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
REI++RD RFHHF +G CSCGDYW
Sbjct: 895 RREIVLRDVYRFHHFNSGSCSCGDYW 920
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 159/302 (52%), Gaps = 8/302 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE D+ L MY K G L + K++ ++ R+V++W ++IAG Q+ E+ L +
Sbjct: 376 GFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATF 435
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G PD I S S+C+ + + QG QIHA V +G + D+ + ++L+++Y+RC
Sbjct: 436 KEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARC 495
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +++ F E E+ D + W+ +I+ +G ++A+ +F +M Q + N TF+S +
Sbjct: 496 GRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAI 555
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
A ++ ++G + VK E ++ L G+CG +++A + M ++ N
Sbjct: 556 SALANLADIKQGKQVHGRAVKT-GHTSETEVANALISLYGKCGSIEDAKMIFSEMSLR-N 613
Query: 241 AIIWKTLLSACKTH----KSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSE 296
+ W T++++C H ++ D+ ++ +E G+ P D +L+ +G+S
Sbjct: 614 EVSWNTIITSCSQHGRGLEALDLFDQMKQE--GLKPNDVTFIGVLAACSHVGLVEEGLSY 671
Query: 297 FR 298
F+
Sbjct: 672 FK 673
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 150/302 (49%), Gaps = 7/302 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
F + G++L +Y+ GS E+V M + + + TLI+G AQ G E L +
Sbjct: 174 AFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIF 233
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M++ G RPD +T S++++C+ + L +G+Q+H+ ++KAG S D SL+ +Y +C
Sbjct: 234 DEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKC 293
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ + F + ++VVLW+ M+ AYG ++ +F QM+ N T+ +L
Sbjct: 294 GDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCIL 353
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
C+ G E G + L +K + + ++D+ + G LD+A ++ M K +
Sbjct: 354 RTCTCTGQIELGEQIHSLSIKN-GFESDMYVSGVLIDMYSKYGCLDKARKILE-MLEKRD 411
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+ W ++++ H + A +E+ QD + + ++A G+ R+
Sbjct: 412 VVSWTSMIAGYVQHDFCEEALATFKEM-----QDCGVWPDNIGLASAASACAGIKAMRQG 466
Query: 301 MR 302
++
Sbjct: 467 LQ 468
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 146/285 (51%), Gaps = 9/285 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D + G+ L +Y K+G + + +V + + R+ ++W+ +++G AQ+GL ++ Y
Sbjct: 73 GLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLY 132
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M P SV+S+C++ QG+ IHA+V K + V ++LI++Y
Sbjct: 133 SQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGF 192
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + F + + D V ++++I+ + G GE A+ +F++M+ + VT SLL
Sbjct: 193 GSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLL 252
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+ G +KG + ++K + + ++DL +CG + E A I N+ + N
Sbjct: 253 AACASVGDLQKGKQLHSYLLKAGMSFDYITEGS-LLDLYVKCGDI-ETAHDIFNLGDRTN 310
Query: 241 AIIWKTLLSA----CKTHKSTDMAGRIAEEILGVNP-QDAAPYVL 280
++W +L A KS ++ G++ + G++P Q P +L
Sbjct: 311 VVLWNLMLVAYGQISDLAKSFEIFGQM--QATGIHPNQFTYPCIL 353
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 118/251 (47%), Gaps = 4/251 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D + SL +Y+K G + + L NV+ W ++ Q + +
Sbjct: 275 GMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIF 334
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G P++ T+ ++ +C+ + G+QIH+ +K G D+ V LI MYS+
Sbjct: 335 GQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKY 394
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
GCLD + K E DVV W+SMIA Y H EEA+ F++M+ +++ S
Sbjct: 395 GCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAA 454
Query: 181 YACSHCGLKEKGMEFF-DLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
AC+ +G++ + V Y + + +V+L RCG +EA +L R + K
Sbjct: 455 SACAGIKAMRQGLQIHARVYVSGY--AADISIWNTLVNLYARCGRSEEAFSLFREIEHK- 511
Query: 240 NAIIWKTLLSA 250
+ I W L+S
Sbjct: 512 DEITWNGLISG 522
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 6/118 (5%)
Query: 81 SCSELATLGQGQ------QIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
+C+ A G+G +IHA V G D + + LI +Y++ G + + + F E
Sbjct: 46 TCALQACRGRGNRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELS 105
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKG 192
D V W +M++ Y G G+EA L+ QM S+L AC+ L +G
Sbjct: 106 SRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQG 163
>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Brachypodium distachyon]
Length = 646
Score = 347 bits (890), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 176/449 (39%), Positives = 262/449 (58%), Gaps = 24/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D+ GSSL MY KV +P+R+ I W +++AG AQNG ++ L +
Sbjct: 203 GFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDEALGLF 262
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G +P +TF S+I +C LA+L G+Q+HA V++ G +V + SSLI MY +C
Sbjct: 263 RRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDMYCKC 322
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + + F + D+V W++MI + HG EA+ LF++ME + N +TF+++L
Sbjct: 323 GNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHITFLAVL 382
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL +KG ++F+ M Y P LEH+ + D LGR G L+EA I M +K
Sbjct: 383 TACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLEEAYNFISGMKIKPT 442
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A +W TLL ACK HK+T +A +A++I + P+ +++LSN ++S+ RW + R++
Sbjct: 443 ASVWSTLLRACKVHKNTVLAEEVAKKIFDLEPRSMGSHIILSNTYSSSGRWNEAAHLRKS 502
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
MR++ ++KEP SW+E+KN+ H F DKSHP I L + +M +GYVP+T
Sbjct: 503 MRKKGMQKEPACSWIEVKNKQHVFVAHDKSHPWYERIIDALNVFSEQMVRQGYVPNTDDV 562
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
D++ E+K L HSEKLAI F G+I P K+IS
Sbjct: 563 FQDIEEEQKNSVLCGHSEKLAIVF-----GIISTPPGTTIRVMKNLRVCVDCHTVTKFIS 617
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+I REI++RDA+RFHHF++G CSCGD+W
Sbjct: 618 KIVGREIVMRDANRFHHFKDGICSCGDFW 646
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 85/160 (53%)
Query: 26 EKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSEL 85
KV MP ++V++W TL+ G A++G + L M G +PD T SV+ +E
Sbjct: 127 RKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEG 186
Query: 86 ATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMI 145
A + +G ++H + G DV V SSLI MY+ C D SVK F D +LW+SM+
Sbjct: 187 ADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSML 246
Query: 146 AAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
A +G +EA+ LF +M + VTF SL+ AC +
Sbjct: 247 AGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGN 286
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 91/210 (43%), Gaps = 18/210 (8%)
Query: 79 ISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC--------------LD 124
+ SC+ L G +HA +++GA D ++L+++Y + L+
Sbjct: 65 LKSCAALGLRALGASLHALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLE 124
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
K F E DVV W++++ G+ EA+ L +M + + + T S+L +
Sbjct: 125 SVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFA 184
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
+GME + + ++D+ C D + + N+PV+ +AI+W
Sbjct: 185 EGADVRRGMELHGFATRNGFHDDVFVG-SSLIDMYANCTRTDYSVKVFDNLPVR-DAILW 242
Query: 245 KTLLSACKTHKSTDMAGRIAEEIL--GVNP 272
++L+ C + S D A + +L G+ P
Sbjct: 243 NSMLAGCAQNGSVDEALGLFRRMLHSGIKP 272
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 347 bits (890), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 179/442 (40%), Positives = 256/442 (57%), Gaps = 25/442 (5%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
++L +MY + GSL+E + V R+VI+W ++IAG AQ+G E + M+
Sbjct: 469 ANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEEL 528
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
PD ITF SV+S C L G+QIH + ++G LDV + ++LI+MY RCG L D+
Sbjct: 529 EPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARN 588
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEAND-VTFVSLLYACSHCG 187
F ++ DV+ W++MI G+ +AI LF QM+ + F D TF S+L AC+H G
Sbjct: 589 VFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPPDGSTFTSILSACNHAG 648
Query: 188 LKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTL 247
L +G + F M +Y P +EHY C+V LLGR EA LI MP +A +W+TL
Sbjct: 649 LVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETL 708
Query: 248 LSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVK 307
L AC+ H + +A A L +N ++ A Y+LLSN++A+A RW V++ R M R ++
Sbjct: 709 LGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIR 768
Query: 308 KEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSE 367
KEPG SW+E+ N +H+F D+SHP + EI L+ L+ EM+ GY PDT +HD+
Sbjct: 769 KEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEMEEAGYFPDTQHVLHDLGKA 828
Query: 368 EKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREI 408
+E +L HSE+LAIA+ GLI P K+IS++ REI
Sbjct: 829 HQETSLCTHSERLAIAY-----GLIKTPPGTPIRIFKNLRICGDCHTASKFISKLVGREI 883
Query: 409 IVRDASRFHHFRNGKCSCGDYW 430
I RD++RFH F+NGKCSC DYW
Sbjct: 884 IARDSNRFHSFKNGKCSCEDYW 905
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 139/254 (54%), Gaps = 2/254 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D+ + L +MY+K S+++ +V + MP R+VI+W +LI+ AQ G + +
Sbjct: 57 GVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLF 116
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ GF P+KIT++S++++C A L G++IH++++KAG D V +SL+SMY +C
Sbjct: 117 EEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKC 176
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L + + F DVV +++M+ Y +E + LF QM + + VT+++LL
Sbjct: 177 GDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLL 236
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
A + + ++G L V++ + T +V + RCG +D A + + + +
Sbjct: 237 DAFTTPSMLDEGKRIHKLTVEE-GLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADR-D 294
Query: 241 AIIWKTLLSACKTH 254
+++ L++A H
Sbjct: 295 VVVYNALIAALAQH 308
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 148/283 (52%), Gaps = 8/283 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D+ G++L MY + G L + ++ MP R++I+W +IAG A+ + + Y
Sbjct: 360 GHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLY 419
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G +P ++TF+ ++S+C+ + G+ IH +++++G + + ++L++MY RC
Sbjct: 420 KQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRC 479
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L ++ F + DV+ W+SMIA + HG E A LF++M+ +E E +++TF S+L
Sbjct: 480 GSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVL 539
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
C + E G + + + + + ++++ RCG L +A + ++ + +
Sbjct: 540 SGCKNPEALELGKQIHGRITES-GLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHR-D 597
Query: 241 AIIWKTLLSACKTH----KSTDMAGRIAEEILGVNPQDAAPYV 279
+ W ++ C K+ ++ ++ E G P D + +
Sbjct: 598 VMSWTAMIGGCADQGEDMKAIELFWQMQNE--GFRPPDGSTFT 638
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 142/268 (52%), Gaps = 4/268 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D+ G++L M ++ G + ++ + + R+V+ + LIA AQ+G + +QY
Sbjct: 259 GLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQY 318
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
MR G ++ T++S++++CS L G+ IH+ + + G S DV + ++LISMY+RC
Sbjct: 319 YRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARC 378
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L + + F D++ W+++IA Y EA+ L++QM+ + + VTF+ LL
Sbjct: 379 GDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLL 438
Query: 181 YACSHCGLKEKG-MEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
AC++ G M D++ + L + ++++ RCG L EA + +
Sbjct: 439 SACANSSAYADGKMIHEDILRSGIKSNGHLAN--ALMNMYRRCGSLMEAQNVFEGTQAR- 495
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEI 267
+ I W ++++ H S + A ++ +E+
Sbjct: 496 DVISWNSMIAGHAQHGSYETAYKLFQEM 523
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 140/284 (49%), Gaps = 4/284 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G++ D +SL MY K G L +V + R+V+++ T++ AQ ++ L +
Sbjct: 158 GYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLF 217
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G PDK+T+++++ + + + L +G++IH V+ G + D+ V ++L++M RC
Sbjct: 218 GQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRC 277
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +D + + F DVV+++++IAA HG EA + +M N T++S+L
Sbjct: 278 GDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSIL 337
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACS E G + + + ++ ++ + RCG L +A L MP K +
Sbjct: 338 NACSTSKALEAG-KLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMP-KRD 395
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLS 282
I W +++ + A R+ +++ GV P LLS
Sbjct: 396 LISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLS 439
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 106/184 (57%), Gaps = 7/184 (3%)
Query: 69 RP---DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD 125
RP D+ T+V+++ +C+ L + ++IHA++V+AG D+ + + LI+MY +C + D
Sbjct: 21 RPTETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLD 80
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
+ + F E DV+ W+S+I+ Y G ++A LFE+M+ F N +T++S+L AC
Sbjct: 81 AHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYS 140
Query: 186 CGLKEKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
E G + ++K Y+R PR+++ ++ + G+CG L A + + + + + +
Sbjct: 141 PAELENGKKIHSQIIKAGYQRDPRVQN--SLLSMYGKCGDLPRARQVFAGISPR-DVVSY 197
Query: 245 KTLL 248
T+L
Sbjct: 198 NTML 201
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 347 bits (890), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 167/433 (38%), Positives = 261/433 (60%), Gaps = 24/433 (5%)
Query: 17 MKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFV 76
++S L E + R+V+ W +++ AQ + + ++ MR G RP K+T V
Sbjct: 304 IRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIV 363
Query: 77 SVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYS 136
S++S C+ L G+ +H+ + K +D + ++L+ MY++CG ++ + + F+E
Sbjct: 364 SLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISR 423
Query: 137 DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFF 196
D+ +W+++I + HG GEEA+++F +ME++ + ND+TF+ LL+ACSH GL +G + F
Sbjct: 424 DICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLF 483
Query: 197 DLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKS 256
+ MV + P++EHY C+VDLLGR G LDEA +I++MP+K N I+W L++AC+ HK+
Sbjct: 484 EKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKN 543
Query: 257 TDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLE 316
+ A ++L + P++ VL+SNI+A+A RW + R+ M+ +KKEPG S +E
Sbjct: 544 PQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIE 603
Query: 317 IKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHH 376
+ VH+F MGD+SHP+ I+ L E+ ++ GYVPDT + ++D EEKE L +H
Sbjct: 604 VNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYH 663
Query: 377 SEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREIIVRDASRFH 417
SEKLA+AF GLI P K +S+I R IIVRD +RFH
Sbjct: 664 SEKLAMAF-----GLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRDRNRFH 718
Query: 418 HFRNGKCSCGDYW 430
HFR G CSCGDYW
Sbjct: 719 HFREGYCSCGDYW 731
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 140/313 (44%), Gaps = 45/313 (14%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + D+ G++L MY + + V M R+V++W T+I ++N + L+
Sbjct: 154 GLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELI 213
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV--ISSLISMYS 118
M + RP ++ VS+++ ++ A + G+ +HA V++ + +GV ++L+ MY+
Sbjct: 214 REMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYA 273
Query: 119 RCG--------------------------C-----LDDSVKTFLECEYSDVVLWSSMIAA 147
+CG C L+++ F + DV++W++M++A
Sbjct: 274 KCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSA 333
Query: 148 YGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKP 207
Y ++A NLF+QM VT VSLL C+ G + G V Y K
Sbjct: 334 YAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGK-----WVHSYIDKE 388
Query: 208 RLE----HYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRI 263
R+E T +VD+ +CG ++ A L + + +W +++ H + A I
Sbjct: 389 RVEVDCILNTALVDMYAKCGDINAAGRLFIE-AISRDICMWNAIITGFAMHGYGEEALDI 447
Query: 264 AEEI--LGVNPQD 274
E+ GV P D
Sbjct: 448 FAEMERQGVKPND 460
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 101/219 (46%), Gaps = 14/219 (6%)
Query: 40 WITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVV 99
W +I + + L+ Y +R + F D SV+ +C +++ G++IH V+
Sbjct: 92 WNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVL 151
Query: 100 KAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAIN 159
K G DV V ++L+ MY C C++ + F + DVV WS+MI + + + + A+
Sbjct: 152 KKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALE 211
Query: 160 LFEQMEQKEFEANDVTFVSL--LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY----- 212
L +M + ++V VS+ L+A + K M + + R EH
Sbjct: 212 LIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVI------RNSNNEHMGVPTT 265
Query: 213 TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSAC 251
T ++D+ +CG+L A L + K + W +++ C
Sbjct: 266 TALLDMYAKCGHLGLARQLFNGLTQKT-VVSWTAMIAGC 303
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 89/188 (47%), Gaps = 7/188 (3%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E+D + ++L MY K G + ++ R++ W +I G A +G E+ LD +
Sbjct: 391 EVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAE 450
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSRCG 121
M G +P+ ITF+ ++ +CS + +G+++ ++V G + ++ + R G
Sbjct: 451 MERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAG 510
Query: 122 CLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGK---GEEAINLFEQMEQKEFEANDVTFV 177
LD++ + + ++W +++AA H GE A ++E + N +
Sbjct: 511 LLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYN--VLM 568
Query: 178 SLLYACSH 185
S +YA ++
Sbjct: 569 SNIYAAAN 576
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein At2g39620-like
[Vitis vinifera]
Length = 1005
Score = 347 bits (890), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 177/445 (39%), Positives = 262/445 (58%), Gaps = 15/445 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPI-RNVIAWITLIAGKAQNGLAEDVLDQ 59
GFE D ++L MY K GSL E + ++ + W +IA QNG A++ +
Sbjct: 561 GFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISS 620
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
++ MR+ F P+ +TFVSV+ + + LA +G HA +++ G + V +SLI MY++
Sbjct: 621 FHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAK 680
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG LD S K F E ++ D V W++M++ Y HG G+ AI LF M++ + + + V+FVS+
Sbjct: 681 CGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSV 740
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L AC H GL E+G + F M KY KP LEHY C+VDLLGR G DE I+ MPV+
Sbjct: 741 LSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEP 800
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
+A +W LL +C+ H + + + ++ + P++ A +V+LS+I+A + RW + R
Sbjct: 801 DAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARS 860
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M + +KK PG SW+E+KN+VH F +GDKSHP+ + L L +M+ GYVPD
Sbjct: 861 KMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRSC 920
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFA----------EHTRGLIVM----LPFKYISEIKN 405
+ +++ E+KE L HSE+LAI FA + + L V K+IS+I
Sbjct: 921 VLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCADCHTTTKFISKITT 980
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
R IIVRDA+RFHHF +G CSC DYW
Sbjct: 981 RRIIVRDATRFHHFEDGICSCNDYW 1005
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 125/247 (50%), Gaps = 3/247 (1%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D++ + L MY K G + +++ + R+++AW +IA Q G E+ L + M+
Sbjct: 363 DILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQ 422
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+P+++T +S++ +C++L+ L G+ IH VKA D+ ++L+SMY++CG
Sbjct: 423 NQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFT 482
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
++ TF D+V W+S+I Y G AI++F ++ + T V ++ AC+
Sbjct: 483 AALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACA 542
Query: 185 HCGLKEKGMEFFDLMVK-KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
++G L+VK + +++ ++D+ +CG L A L + +
Sbjct: 543 LLNDLDQGTCIHGLIVKLGFESDCHVKN--ALIDMYAKCGSLPSAEFLFNKTDFTKDEVT 600
Query: 244 WKTLLSA 250
W +++A
Sbjct: 601 WNVIIAA 607
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 127/241 (52%), Gaps = 2/241 (0%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+ L +Y K G + +V M ++ ++W T++AG A NG +VL+ ++ M++ R
Sbjct: 267 NGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVR 326
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
+K++ VS + +E L +G++IH ++ D+ V + L+ MY++CG + + +
Sbjct: 327 INKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQL 386
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F + D+V WS++IAA G EEA++LF++M+ ++ + N VT +S+L AC+ L
Sbjct: 387 FWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLL 446
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
+ G VK L T +V + +CG+ A M + + + W +L++
Sbjct: 447 KLGKSIHCFTVKA-DMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSR-DIVTWNSLIN 504
Query: 250 A 250
Sbjct: 505 G 505
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 124/250 (49%), Gaps = 4/250 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E D+ G+ L MY K G L +V MP R+V+AW +IAG +Q+ + +D +
Sbjct: 159 GLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFF 218
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M++VG P ++ +++ +L+ + + IH V + S V + LI +YS+C
Sbjct: 219 RSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFS--SAVSNGLIDLYSKC 276
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +D + + F + D V W +M+A Y +G E + LF++M+ N V+ VS
Sbjct: 277 GDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAF 336
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
A + EKG E +++ R + T ++ + +CG ++A L + + +
Sbjct: 337 LAAAETIDLEKGKEIHGCALQQ-RIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGR-D 394
Query: 241 AIIWKTLLSA 250
+ W +++A
Sbjct: 395 LVAWSAIIAA 404
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 4/218 (1%)
Query: 33 PIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQ 92
P + I W ++I ++ + L+ Y M G PDK TF V+ +C+ L +G
Sbjct: 90 PNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGV 149
Query: 93 QIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHG 152
H E+ + G DV + + L+ MYS+ G L + + F + DVV W++MIA
Sbjct: 150 WFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSE 209
Query: 153 KGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY 212
EA++ F M+ E + V+ ++L E + +RR
Sbjct: 210 DPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYV---FRRDFSSAVS 266
Query: 213 TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
++DL +CG +D A + M V + + W T+++
Sbjct: 267 NGLIDLYSKCGDVDVARRVFDQM-VDQDDVSWGTMMAG 303
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 347 bits (890), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 175/455 (38%), Positives = 262/455 (57%), Gaps = 30/455 (6%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPI--RNVIAWITLIAGKAQNGLAEDVLD 58
G + DL+ ++L MY K S + +P+ RNV+ W +I G AQ G + D L
Sbjct: 441 GEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALK 500
Query: 59 QYNLM--RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAG--ASLDVGVISSLI 114
+ M G P+ T ++ +C+ LA + G+QIHA V++ S V + LI
Sbjct: 501 LFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLI 560
Query: 115 SMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDV 174
MYS+CG +D + F + W+SM+ YG HG+G EA+++F++M + F +D+
Sbjct: 561 DMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDI 620
Query: 175 TFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRN 234
TF+ +LYACSHCG+ ++G+ +FD M Y PR EHY C +DLL R G LD+A +++
Sbjct: 621 TFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKD 680
Query: 235 MPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGV 294
MP++ A++W LLSAC+ H + ++A +++ +N ++ Y L+SNI+A+A RW+ V
Sbjct: 681 MPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDV 740
Query: 295 SEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYV 354
+ R M++ +KK PG SW++ + F +GD+SHP S +I LE L +K GYV
Sbjct: 741 ARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYV 800
Query: 355 PDTGADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP------------------ 396
P+T +HD+D EEK L HSEKLA+A+ GL+ P
Sbjct: 801 PETNFALHDVDEEEKNNLLVEHSEKLALAY-----GLLTTSPGCPIRITKNLRVCGDCHS 855
Query: 397 -FKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
F YIS+I + EI+VRD SRFHHF+NG CSCG YW
Sbjct: 856 AFTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 890
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 157/350 (44%), Gaps = 61/350 (17%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKV---IRLMPIRNVIAWITLIAGKAQNGLAEDVL 57
GFE ++ ++L MY + GSL E + I I +VI+W ++++ ++ A L
Sbjct: 185 GFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTAL 244
Query: 58 DQYNLMRMV------GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVIS 111
D ++ M ++ R D I+ V+++ +C L + Q +++H ++ G DV V +
Sbjct: 245 DLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGN 304
Query: 112 SLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAY----------------------- 148
+LI Y++CG ++++VK F E+ DVV W++M+A Y
Sbjct: 305 ALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPL 364
Query: 149 ----------GFHGKG--EEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFF 196
G+ +G EA+NLF QM N VT +S+L AC+ G +G E
Sbjct: 365 DVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIH 424
Query: 197 DLMVKKYR---------RKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA-NAIIWKT 246
+K L Y ++D+ +C A ++ ++P++ N + W
Sbjct: 425 AYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTV 484
Query: 247 LLSACKTHKSTDMAGRIAEEILGVNPQDAAPY------VLLSNIHASAKR 290
++ + ++ A ++ E++ P AP +L++ H +A R
Sbjct: 485 MIGGHAQYGDSNDALKLFVEMIS-EPYGVAPNAYTISCILMACAHLAAIR 533
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 111/251 (44%), Gaps = 11/251 (4%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G+ + Y+ G+ V+ + + W LI + G + ++ M G
Sbjct: 92 GTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGT 151
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
RPD T V+ +C EL + G H + G +V + ++L++MYSRCG L+++
Sbjct: 152 RPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASM 211
Query: 129 TFLECE---YSDVVLWSSMIAAYGFHGKGEEAINLFEQM-----EQKEFEAND-VTFVSL 179
F E DV+ W+S+++A+ A++LF +M E+ E +D ++ V++
Sbjct: 212 IFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNI 271
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L AC + E ++ P + ++D +CG ++ A + M K
Sbjct: 272 LPACGSLKAVPQTKEVHGNAIRN-GTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFK- 329
Query: 240 NAIIWKTLLSA 250
+ + W +++
Sbjct: 330 DVVSWNAMVAG 340
>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 754
Score = 347 bits (890), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 183/448 (40%), Positives = 264/448 (58%), Gaps = 24/448 (5%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
++ ++ GS+L MY K S+ E V R M +N+I+W +I G QNG E+ + ++
Sbjct: 312 YDGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFS 371
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M+ G +P+ T SVISSC+ LA+L +G Q H + +G + V S+L+++Y +CG
Sbjct: 372 EMQTDGIKPNDFTLGSVISSCANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCG 431
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
++D+ + F E + D V ++++++ Y GK +E I+LFE+M K + N VTF+ +L
Sbjct: 432 SIEDAHRLFDEMPFHDQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLS 491
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
ACS GL EKG +F M + + +HYTC++DL R G L EA IR MP +A
Sbjct: 492 ACSRSGLVEKGCSYFHSMQQDHGIVLLDDHYTCMIDLYSRSGRLKEAEEFIRQMPRCPDA 551
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
I W TLLSAC+ ++ AE +L +PQ+ A YVLL ++HAS W V+ R M
Sbjct: 552 IGWATLLSACRLRGDMEIGKWAAENLLKTDPQNPASYVLLCSMHASKGEWSEVALLRRGM 611
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
R+R VKKEPG SW++ KN+VH F+ D+SHP S I L+ L S+M GY PD + +
Sbjct: 612 RDRQVKKEPGCSWIKYKNRVHIFSADDQSHPFSGTIYEKLQWLNSKMAEEGYKPDVSSVL 671
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVM---LPF----------------KYISE 402
HD+ EK + L +HSEKLAIAF GLI + +P K+IS+
Sbjct: 672 HDVADAEKVHMLSNHSEKLAIAF-----GLIFVPEEMPIRVVKNLRVCVDCHNATKFISK 726
Query: 403 IKNREIIVRDASRFHHFRNGKCSCGDYW 430
I R+I+VRDA RFH F NG CSCGD+W
Sbjct: 727 ITGRDILVRDAVRFHKFSNGICSCGDFW 754
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 141/285 (49%), Gaps = 4/285 (1%)
Query: 24 EGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCS 83
E V M R+ I W T++ G QNGL + LD + MR G D+ TF S++++C
Sbjct: 233 EARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMRAEGVGIDQYTFGSILTACG 292
Query: 84 ELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSS 143
LA +G+QIHA ++ ++ V S+L+ MYS+C + + F +++ W++
Sbjct: 293 ALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCKNIISWTA 352
Query: 144 MIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKY 203
MI YG +G GEEA+ +F +M+ + ND T S++ +C++ E+G +F + +
Sbjct: 353 MIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLASLEEGAQFHCMALVSG 412
Query: 204 RRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRI 263
R P + + +V L G+CG +++A L MP + + + L+S +
Sbjct: 413 LR-PYITVSSALVTLYGKCGSIEDAHRLFDEMPFH-DQVSYTALVSGYAQFGKAKETIDL 470
Query: 264 AEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNV 306
E++L GV P +LS S +G S F ++ +
Sbjct: 471 FEKMLLKGVKPNGVTFIGVLSACSRSGLVEKGCSYFHSMQQDHGI 515
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 127/305 (41%), Gaps = 46/305 (15%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAG-------KAQNGLAEDVLDQYNL 62
S+LAH + L + +++ MP R+ +++ LIAG G +L + +
Sbjct: 84 SALAHARL----LPDMDRLFASMPQRDAVSYNALIAGFSGAGAPARAAGAYRALLREEAV 139
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
+ RP +IT ++ + S L G+Q+H ++++ G S L+ MY++ G
Sbjct: 140 VDGARVRPSRITMSGMVMAASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGL 199
Query: 123 LDDSVKTF------------------LECEY-------------SDVVLWSSMIAAYGFH 151
+ D+ + F L C+ D + W++M+ +
Sbjct: 200 IGDAKRVFDEMVVKNVVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQN 259
Query: 152 GKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEH 211
G EA+++F +M + + TF S+L AC E+G + ++ +
Sbjct: 260 GLQSEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTL-YDGNIFV 318
Query: 212 YTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--G 269
+ +VD+ +C + A A+ R M K N I W ++ + + A R+ E+ G
Sbjct: 319 GSALVDMYSKCRSIRLAEAVFRRMTCK-NIISWTAMIVGYGQNGCGEEAVRVFSEMQTDG 377
Query: 270 VNPQD 274
+ P D
Sbjct: 378 IKPND 382
>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
Length = 782
Score = 347 bits (890), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 177/450 (39%), Positives = 271/450 (60%), Gaps = 25/450 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G++ D+V ++L +Y + + + K+ M ++VI W + AQNG ++ L +
Sbjct: 338 GYDRDVVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLF 397
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M++ G RP T V+V+ +C+ LA L +G+QIH+ +++ G +++ V ++LI+MY +C
Sbjct: 398 QEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENGFRMEMVVETALINMYGKC 457
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + ++ F + D+++W+SM+ AY HG +E + LF QM+ +A+ V+FVS+L
Sbjct: 458 GKMAEARSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVL 517
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP-VKA 239
A SH G G ++F M++ + P E Y CVVDLLGR G + EA ++ +
Sbjct: 518 SALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLP 577
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
+ I+W TLL AC+TH TD A AE++L +P + YV+LSN++A+A W GV+ R+
Sbjct: 578 DGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRK 637
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
MR R VKKEPG S +EI N+VH+F GD+SHPR I L+ L SEM+ GY+PDT
Sbjct: 638 LMRSRGVKKEPGRSSIEILNRVHEFLEGDRSHPRRHPIYAELDVLNSEMRAAGYIPDTKM 697
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYI 400
+HD++ E KE L +HSE+LAIAF GL+ P KYI
Sbjct: 698 ILHDVEDERKEDMLFYHSERLAIAF-----GLMSTPPGTPLRVIKNLRVCSDCHTATKYI 752
Query: 401 SEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
S+++ REI+VRD RFH+F++G+CSC DYW
Sbjct: 753 SKLRGREILVRDTHRFHNFKDGRCSCKDYW 782
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 158/311 (50%), Gaps = 6/311 (1%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E D+ +S +M+ +G L + ++ M R+V+ W +I QN + + +
Sbjct: 239 ESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGR 298
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
++ G + + ITFV +++ + L +L +G+ IH V +AG DV V ++L+S+Y RC
Sbjct: 299 LQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEA 358
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
+ K F++ DV+ W+ M AY +G +EA+ LF++M+ + T V++L
Sbjct: 359 PGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDT 418
Query: 183 CSHCGLKEKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
C+H +KG + +++ +R + +E T ++++ G+CG + EA ++ M K +
Sbjct: 419 CAHLAALQKGRQIHSHIIENGFRMEMVVE--TALINMYGKCGKMAEARSVFEKM-AKRDI 475
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEI-LGVNPQDAAPYV-LLSNIHASAKRWQGVSEFRE 299
++W ++L A H D ++ ++ L DA +V +LS + S G F
Sbjct: 476 LVWNSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDGYQYFVA 535
Query: 300 AMRERNVKKEP 310
+++ ++ P
Sbjct: 536 MLQDFSITPTP 546
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 146/291 (50%), Gaps = 9/291 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE + + L MY + GS+ E ++V ++ ++V AW +I Q G + L +
Sbjct: 35 GFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILERKDVFAWTRMIGIYCQQGDYDRALGMF 94
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ P K+T+V+++++C+ +L G +IH ++++ G DV V ++LI+MY++C
Sbjct: 95 YQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKC 154
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + +F E+ DVV W++MIAA H + A L+ +M+ N +T ++
Sbjct: 155 GSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVF 214
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
A +G +F +V + + +++ G G L +A L +M V +
Sbjct: 215 NAYGDPHYLSEG-KFIYSLVSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDM-VDRD 272
Query: 241 AIIWKTLLSACKTH----KSTDMAGRIAEEILGVNPQDAAPYVLLSNIHAS 287
+ W +++ + ++ + GR+ ++ G+ D +VL+ N++ S
Sbjct: 273 VVTWNIVITFYVQNENFGEAVRLFGRLQQD--GIKANDIT-FVLMLNVYTS 320
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 124/250 (49%), Gaps = 2/250 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE D+ G++L +MY K GS+ + + R+V++W +IA Q+ Y
Sbjct: 136 GFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLY 195
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M++ G P+KIT +V ++ + L +G+ I++ V DV V++S ++M+
Sbjct: 196 RRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDVRVMNSAMNMFGNA 255
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L D+ + F + DVV W+ +I Y + EA+ LF +++Q +AND+TFV +L
Sbjct: 256 GLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIKANDITFVLML 315
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
+ KG +L VK+ + T ++ L GRC +A + +M K +
Sbjct: 316 NVYTSLTSLAKGKVIHEL-VKEAGYDRDVVVATALMSLYGRCEAPGQAWKIFVDMGSK-D 373
Query: 241 AIIWKTLLSA 250
I W + A
Sbjct: 374 VITWTVMCVA 383
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 105/217 (48%), Gaps = 4/217 (1%)
Query: 68 FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV 127
F+PD FV+++ CS + G+++H V G + V LI MY++CG + ++
Sbjct: 1 FKPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQ 60
Query: 128 KTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCG 187
+ F E DV W+ MI Y G + A+ +F QM++++ VT+V++L AC+
Sbjct: 61 QVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTE 120
Query: 188 LKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTL 247
+ GME ++++ T ++++ +CG + A + + + + + W +
Sbjct: 121 SLKDGMEIHGQILQQGFEGDVFVG-TALINMYNKCGSVRGAWDSFKRLEHR-DVVSWTAM 178
Query: 248 LSACKTHKSTDMAGRIAE--EILGVNPQDAAPYVLLS 282
++AC H +A + ++ GV P Y + +
Sbjct: 179 IAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFN 215
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 347 bits (889), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 175/455 (38%), Positives = 262/455 (57%), Gaps = 30/455 (6%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPI--RNVIAWITLIAGKAQNGLAEDVLD 58
G + DL+ ++L MY K S + +P+ RNV+ W +I G AQ G + D L
Sbjct: 448 GEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALK 507
Query: 59 QYNLM--RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAG--ASLDVGVISSLI 114
+ M G P+ T ++ +C+ LA + G+QIHA V++ S V + LI
Sbjct: 508 LFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLI 567
Query: 115 SMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDV 174
MYS+CG +D + F + W+SM+ YG HG+G EA+++F++M + F +D+
Sbjct: 568 DMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDI 627
Query: 175 TFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRN 234
TF+ +LYACSHCG+ ++G+ +FD M Y PR EHY C +DLL R G LD+A +++
Sbjct: 628 TFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKD 687
Query: 235 MPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGV 294
MP++ A++W LLSAC+ H + ++A +++ +N ++ Y L+SNI+A+A RW+ V
Sbjct: 688 MPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDV 747
Query: 295 SEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYV 354
+ R M++ +KK PG SW++ + F +GD+SHP S +I LE L +K GYV
Sbjct: 748 ARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYV 807
Query: 355 PDTGADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP------------------ 396
P+T +HD+D EEK L HSEKLA+A+ GL+ P
Sbjct: 808 PETNFALHDVDEEEKNNLLVEHSEKLALAY-----GLLTTSPGCPIRITKNLRVCGDCHS 862
Query: 397 -FKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
F YIS+I + EI+VRD SRFHHF+NG CSCG YW
Sbjct: 863 AFTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 897
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 157/350 (44%), Gaps = 61/350 (17%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKV---IRLMPIRNVIAWITLIAGKAQNGLAEDVL 57
GFE ++ ++L MY + GSL E + I I +VI+W ++++ ++ A L
Sbjct: 192 GFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTAL 251
Query: 58 DQYNLMRMV------GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVIS 111
D ++ M ++ R D I+ V+++ +C L + Q +++H ++ G DV V +
Sbjct: 252 DLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGN 311
Query: 112 SLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAY----------------------- 148
+LI Y++CG ++++VK F E+ DVV W++M+A Y
Sbjct: 312 ALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPL 371
Query: 149 ----------GFHGKG--EEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFF 196
G+ +G EA+NLF QM N VT +S+L AC+ G +G E
Sbjct: 372 DVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIH 431
Query: 197 DLMVKKYR---------RKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA-NAIIWKT 246
+K L Y ++D+ +C A ++ ++P++ N + W
Sbjct: 432 AYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTV 491
Query: 247 LLSACKTHKSTDMAGRIAEEILGVNPQDAAPY------VLLSNIHASAKR 290
++ + ++ A ++ E++ P AP +L++ H +A R
Sbjct: 492 MIGGHAQYGDSNDALKLFVEMIS-EPYGVAPNAYTISCILMACAHLAAIR 540
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 111/251 (44%), Gaps = 11/251 (4%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G+ + Y+ G+ V+ + + W LI + G + ++ M G
Sbjct: 99 GTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGT 158
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
RPD T V+ +C EL + G H + G +V + ++L++MYSRCG L+++
Sbjct: 159 RPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASM 218
Query: 129 TFLECE---YSDVVLWSSMIAAYGFHGKGEEAINLFEQM-----EQKEFEAND-VTFVSL 179
F E DV+ W+S+++A+ A++LF +M E+ E +D ++ V++
Sbjct: 219 IFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNI 278
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L AC + E ++ P + ++D +CG ++ A + M K
Sbjct: 279 LPACGSLKAVPQTKEVHGNAIRN-GTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFK- 336
Query: 240 NAIIWKTLLSA 250
+ + W +++
Sbjct: 337 DVVSWNAMVAG 347
>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 705
Score = 347 bits (889), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 176/444 (39%), Positives = 264/444 (59%), Gaps = 21/444 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + D+ SSL MY K + + +V L+ R+ I+W ++IAG QNGL ++ L +
Sbjct: 269 GLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFF 328
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M M +P +F S++ +C+ L TL G+Q+H + + G ++ + SSL+ MY++C
Sbjct: 329 RQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKC 388
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + + F D+V W++MI HG+ +AI LFEQME + +A +L
Sbjct: 389 GNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKA-------VL 441
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL ++ ++F+ M + + P +EHY V DLLGR G L+EA I M +
Sbjct: 442 TACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPT 501
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
IW TLLSAC+ HK+ DMA ++A IL V+P + Y+LL+NI+++A+RW+ +++R +
Sbjct: 502 GSIWATLLSACRVHKNIDMAEKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRAS 561
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
MR ++K P SW+E+KN+V+ F GD+SHP +I +E L M+ GYVPDT
Sbjct: 562 MRRIGIRKTPACSWIEVKNKVYAFMAGDESHPCYEKIREAMEVLVELMEKEGYVPDTSEV 621
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA----------EHTRGLIVM----LPFKYISEIKNR 406
HD++ E+K+Y + HSE+LAI F T+ L V K+IS+I R
Sbjct: 622 HHDVEEEQKKYLVCSHSERLAIVFGIINTPAGMTIRVTKNLRVCTDCHTATKFISKIVGR 681
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EI+VRD SRFHHF+NG CSCGDYW
Sbjct: 682 EIVVRDNSRFHHFKNGTCSCGDYW 705
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 136/299 (45%), Gaps = 34/299 (11%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVE--------GE------------------------KV 28
G + DL G++L +MY K L E GE K+
Sbjct: 136 GLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKI 195
Query: 29 IRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATL 88
+MP +++++W T+IAG A+NGL E+ L M +PD T SV+ +E +
Sbjct: 196 FEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDI 255
Query: 89 GQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAY 148
+G++IH ++ G D+ V SSLI MY++C + DS + F D + W+S+IA
Sbjct: 256 SRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGC 315
Query: 149 GFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPR 208
+G +E + F QM + + +F S++ AC+H G + + + +
Sbjct: 316 VQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDE-N 374
Query: 209 LEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEI 267
+ + +VD+ +CG + A + M ++ + + W ++ C H A + E++
Sbjct: 375 IFIASSLVDMYAKCGNIRTAKQIFDRMRLR-DMVSWTAMIMGCALHGQAPDAIELFEQM 432
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/263 (19%), Positives = 108/263 (41%), Gaps = 34/263 (12%)
Query: 38 IAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAE 97
+AW ++I +GL L + M G PD F SV+ SC+ L L G+ +H
Sbjct: 72 LAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGY 131
Query: 98 VVKAGASLDVGVISSLISMYSRCGCL-------------------------------DDS 126
+++ G D+ ++L++MYS+ L +DS
Sbjct: 132 IIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDS 191
Query: 127 VKTFLE-CEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
V+ E D+V W+++IA +G EE + + +M + + T S+L +
Sbjct: 192 VRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAE 251
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
+G E +++ + + ++D+ +C + ++ + + + + I W
Sbjct: 252 NVDISRGKEIHGCSIRQ-GLDADIYVASSLIDMYAKCTRVADSCRVF-TLLTERDGISWN 309
Query: 246 TLLSACKTHKSTDMAGRIAEEIL 268
++++ C + D R ++L
Sbjct: 310 SIIAGCVQNGLFDEGLRFFRQML 332
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 90 QGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYG 149
Q QQ+HA+V+K AS +S L+S+YS L DS++ F + + W S+I Y
Sbjct: 24 QAQQLHAQVLKFQASSLC-NLSLLLSIYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYT 82
Query: 150 FHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
HG +++ F M + F S+L +C+
Sbjct: 83 SHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCA 117
>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 689
Score = 347 bits (889), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 179/444 (40%), Positives = 269/444 (60%), Gaps = 18/444 (4%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ + ++L YMK G + E + M RN+++W +I+G QNG AE L ++ M
Sbjct: 246 DMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEML 305
Query: 65 MVG--FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
G +P+ +T VSV+ +C++ A L +G++IH G L+ V ++L MY++C
Sbjct: 306 QDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYS 365
Query: 123 LDDSVKTF--LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
L ++ F + +++ W++MI AY HG G EA+++FE M + + + VTF+ LL
Sbjct: 366 LVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLL 425
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
CSH GL + G+ F+ M + +PR+EHY CVVDLLGR G L EA LI MP++A
Sbjct: 426 SGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAG 485
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+W LL+AC++H++ ++A A + + P ++ YVLLSN++A A W+ V + R
Sbjct: 486 PSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGMWEEVKKLRAL 545
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
++ + +KK PG SW+EI + H F DKSHP++ EI +LE L ++K+ GY+PDT
Sbjct: 546 LKYQGMKKSPGCSWIEINGKSHLFMGADKSHPQAKEIYKFLEALPEKIKMAGYIPDTSFV 605
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA-EHTRGLIVM-------------LPFKYISEIKNR 406
+HD+ EEKEYNL HSEKLAIAF +TR +V+ K+IS+I R
Sbjct: 606 LHDISEEEKEYNLTTHSEKLAIAFGLLNTRPGVVLRVTKNLRICGDCHAATKFISKIYER 665
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EIIVRD +RFH F++G CSCGDYW
Sbjct: 666 EIIVRDLNRFHCFKDGSCSCGDYW 689
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 139/338 (41%), Gaps = 40/338 (11%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDV---L 57
G + + + + MY SG L V + + + + ++I ++G L
Sbjct: 107 GLQPNAFLAAKMVAMYASSGDLDSAVVVFDRIDNPSSLLYNSIIRAYTRHGXXXXXXXXL 166
Query: 58 DQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMY 117
+ Y M +G D T V+ SC++L+ + G+ +H + ++ G D V +SLI MY
Sbjct: 167 EAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMY 226
Query: 118 SRCGCLDDSVKTFLE-------------------------------CEYSDVVLWSSMIA 146
+CG + D+ K F + E+ ++V W++MI+
Sbjct: 227 VKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMIS 286
Query: 147 AYGFHGKGEEAINLFEQMEQ--KEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYR 204
Y +G E+A+ LF++M Q E + N VT VS+L AC+ E+G D
Sbjct: 287 GYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDF-ANGIG 345
Query: 205 RKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA-NAIIWKTLLSACKTHKSTDMAGRI 263
T + + +C L EA + N I W T+++A +H A I
Sbjct: 346 LHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSI 405
Query: 264 AEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
E +L GV P LLS S G++ F +
Sbjct: 406 FENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFND 443
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 15/129 (11%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPI--RNVIAWITLIAGKAQNGLAEDVLD 58
G L+ ++LA MY K SLVE ++ +N+IAW T+I A +G + +
Sbjct: 345 GLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVS 404
Query: 59 QYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASL--DVGVISSLISM 116
+ M G +PD +TF+ ++S CS H+ ++ AG + D+G I S+
Sbjct: 405 IFENMLRAGVQPDAVTFMGLLSGCS-----------HSGLIDAGLNHFNDMGTIHSVEPR 453
Query: 117 YSRCGCLDD 125
C+ D
Sbjct: 454 VEHYACVVD 462
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 53/118 (44%), Gaps = 3/118 (2%)
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P ++ + + + GQQ HA++V G + + + +++MY+ G LD +V
Sbjct: 75 PHPSSYAPIFQFLTRHNFIKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVV 134
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEF---EANDVTFVSLLYACS 184
F + +L++S+I AY HG E + F ++ T +L +C+
Sbjct: 135 FDRIDNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCA 192
>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
Length = 825
Score = 347 bits (889), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 176/449 (39%), Positives = 263/449 (58%), Gaps = 24/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+E +L G++L +Y K ++ ++ R + N ++W T+I G Q+G AED L +
Sbjct: 382 GYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVF 441
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
MR ++TF SV+ +C+ A++ QIH+ + K+ + D V +SLI Y++C
Sbjct: 442 QEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKC 501
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
GC+ D++K F DVV W+++I+ Y HG+ +A+ LF +M + + + NDVTFV+LL
Sbjct: 502 GCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDALELFNRMNKSDTKPNDVTFVALL 561
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
C GL +G+ F+ M +R KP ++HYTC+V LLGR G L++A I ++P +
Sbjct: 562 SVCGSTGLVNQGLSLFNSMTMDHRIKPSMDHYTCIVRLLGRAGRLNDALKFIGDIPSTPS 621
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
++W+ LLS+C HK+ + AE++L + PQD YVLLSN++A+A V+ R++
Sbjct: 622 PMVWRALLSSCVVHKNVALGKFSAEKVLEIEPQDETTYVLLSNMYAAAGILDQVALLRKS 681
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
MR VKKE G+SW+EIK +VH F++G HP I+ LE L + GYVPD
Sbjct: 682 MRNIGVKKEVGLSWVEIKGEVHAFSVGSADHPDMRIINAMLEWLNLKASREGYVPDINVV 741
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
+HD+D EEK L HSE+LA+A+ GL + P FK IS
Sbjct: 742 LHDVDEEEKARMLWVHSERLALAY-----GLSMTPPGHPIRIMKNLRSCLDCHTVFKVIS 796
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+I REI+VRD +RFHHF G CSCGDYW
Sbjct: 797 KIVQREIVVRDINRFHHFDEGICSCGDYW 825
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 150/303 (49%), Gaps = 8/303 (2%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G +L MY K G + + V ++P +VI W LI+ AQ+ E + + M
Sbjct: 289 GGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSV 348
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
P++ + V+ +C+ +A L GQQIH V+K G ++ V ++L+ +Y++C +++S++
Sbjct: 349 VPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLE 408
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F ++ V W+++I Y G E+A+++F++M + VTF S+L AC++
Sbjct: 409 IFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTAS 468
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
+ ++ L+ K + + ++D +CG + +A + ++ ++ + + W ++
Sbjct: 469 IKHTVQIHSLIEKSTFNNDTIVCNS-LIDTYAKCGCIRDALKVFESI-IQCDVVSWNAII 526
Query: 249 SACKTH-KSTD---MAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
S H ++TD + R+ + P D LLS ++ QG+S F +
Sbjct: 527 SGYALHGRATDALELFNRMNKS--DTKPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDH 584
Query: 305 NVK 307
+K
Sbjct: 585 RIK 587
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 142/289 (49%), Gaps = 11/289 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + + GSSL Y G++ V + ++ + W +++ ++N + ED L+ +
Sbjct: 180 GHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYSENDIPEDALNTF 239
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ MRM G +P+ SV+ + L++ G+ IH VK + V +L+ MY++C
Sbjct: 240 SKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGGALLDMYAKC 299
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++D+ F + DV+LWS +I+ Y + E+A +F +M + N+ + +L
Sbjct: 300 GYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVL 359
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC++ + G + +L++ K + L ++D+ +C ++ + + R++ AN
Sbjct: 360 QACANVAFLDLGQQIHNLVI-KLGYESELFVGNALMDVYAKCRNMENSLEIFRSLR-DAN 417
Query: 241 AIIWKTLLSA-CKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASA 288
+ W T++ C++ AE+ L V + A +VL + + S+
Sbjct: 418 EVSWNTIIVGYCQSG--------FAEDALSVFQEMRAAHVLSTQVTFSS 458
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 115/250 (46%), Gaps = 8/250 (3%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
+LD + L ++Y K G L ++ MP RN+++++TL+ G A G E+ +
Sbjct: 81 QLDTFCANVLLNLYAKLGPLAAARRLFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRR 140
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
++ G + +++ + G IHA K G + V SSLI YS CG
Sbjct: 141 LQREGHEVNHFVLTTILKVLVAMDAPGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGA 200
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
+ + F + D V W++M++ Y + E+A+N F +M + N S+L A
Sbjct: 201 VSHARCVFDGIIWKDAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKA 260
Query: 183 --CSHCGLKEKGMEFFDLMVKKY-RRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
C + KG+ VK +P + ++D+ +CGY+++A + +P
Sbjct: 261 AVCLSSAVLGKGIH--GCAVKTLCDTEPHVG--GALLDMYAKCGYIEDARTVFEIIP-HD 315
Query: 240 NAIIWKTLLS 249
+ I+W L+S
Sbjct: 316 DVILWSFLIS 325
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 91 GQQIHAEVVKAG--ASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAY 148
G+ +HA VV+ G A LD + L+++Y++ G L + + F ++V + +++ Y
Sbjct: 66 GRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAARRLFDGMPERNMVSFVTLVQGY 125
Query: 149 GFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G EEA LF +++++ E N ++L
Sbjct: 126 ALRGGFEEAAGLFRRLQREGHEVNHFVLTTIL 157
>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g01510-like [Cucumis
sativus]
Length = 816
Score = 347 bits (889), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 167/436 (38%), Positives = 274/436 (62%), Gaps = 15/436 (3%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L MY K E +K+ + ++ + W +I+ Q G E+ ++ ++ MR G
Sbjct: 381 NALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVP 440
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
D+ TF S++ +C+ LA++ G+Q+H+ ++++G +V S+L+ Y++CGC+ D++K+
Sbjct: 441 ADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKS 500
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F E + V W+++I+AY +G + +N F+QM Q ++ + V+F+S+L ACSHCG
Sbjct: 501 FGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFV 560
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
E+ + F+ M + Y P+ EHYT +VD+L R G DEA L+ MP + + I+W ++L+
Sbjct: 561 EEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLN 620
Query: 250 ACKTHKSTDMAGRIAEEILGV-NPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKK 308
+C+ HK+ ++A + A+ + + + +DAAPY+ +SNI+A A +W V++ ++AMR+R V+K
Sbjct: 621 SCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRK 680
Query: 309 EPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEE 368
P SW+EIK+Q H F+ DKSHP +I + L+ EM+ +GY PDT +HD+D
Sbjct: 681 VPAYSWVEIKHQTHVFSANDKSHPEMKKILRKINALSKEMEKKGYKPDTTCALHDVDEVI 740
Query: 369 KEYNLKHHSEKLAIAFA----EHTRGLIVM----------LPFKYISEIKNREIIVRDAS 414
K +LK+HSE+ AIAFA ++VM K IS+I REIIVRD+S
Sbjct: 741 KIESLKYHSERFAIAFALMNTPDGSPIVVMKNLRACTDCHAAIKVISQIVEREIIVRDSS 800
Query: 415 RFHHFRNGKCSCGDYW 430
RFHHF++G CSCGDYW
Sbjct: 801 RFHHFKDGVCSCGDYW 816
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 125/258 (48%), Gaps = 2/258 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
F ++ G++L Y K + E K+ MP + I++ +I A NG ++ D +
Sbjct: 271 NFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLF 330
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
++ F + F +++S + L G+QIH + + GA+ + V ++L+ MY++C
Sbjct: 331 RKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKC 390
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
++ K F V W++MI+AY GK EE IN+F M + A+ TF S+L
Sbjct: 391 NGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASIL 450
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC++ G + L+++ + + ++D +CG + +A MP + N
Sbjct: 451 RACANLASISLGRQLHSLLIRS-GFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPER-N 508
Query: 241 AIIWKTLLSACKTHKSTD 258
++ W L+SA + + D
Sbjct: 509 SVSWNALISAYAQNGNVD 526
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 125/261 (47%), Gaps = 24/261 (9%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+E +L+ +SL Y K+ L ++ + M ++ + + +L+ G + GL E+ ++ +
Sbjct: 170 GYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELF 229
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ G +P TF +++S+ L GQQ+H V+K +V V ++L+ YS+
Sbjct: 230 LELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKH 289
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
+D+ K F E D + ++ +I +Y ++G+ +E+ +LF +++ F+ F +LL
Sbjct: 290 DQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLL 349
Query: 181 YACS-----------HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAA 229
+ HC G F + R+E+ +VD+ +C EA
Sbjct: 350 SIATSSLNLRMGRQIHCQAITVGANF----------ESRVEN--ALVDMYAKCNGDKEAQ 397
Query: 230 ALIRNMPVKANAIIWKTLLSA 250
+ N+ K+ + W ++SA
Sbjct: 398 KIFDNIACKS-TVPWTAMISA 417
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 84/167 (50%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
++K G L + ++ M R ++W LI G Q+ +++ Y MR G PD +T
Sbjct: 84 HLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTL 143
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
V+++S EL T QIH V+K G ++ V +SL+ Y + CL + + F
Sbjct: 144 VTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLN 203
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
D V ++S++ Y G EEAI LF ++ + +D TF +LL A
Sbjct: 204 KDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSA 250
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF ++ +GS+L Y K G + + K MP RN ++W LI+ AQNG + L+ +
Sbjct: 473 GFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSF 532
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQG-------QQIHAEVVKAGASLDVGVISSL 113
M G++PD ++F+SV+S+CS + + QI+ K +S+
Sbjct: 533 QQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREH------YTSM 586
Query: 114 ISMYSRCGCLDDSVKTFLECEYSDV-VLWSSMIAAYGFHGKGEEA 157
+ + R G D++ K E + ++WSS++ + H E A
Sbjct: 587 VDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELA 631
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 347 bits (889), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 177/448 (39%), Positives = 263/448 (58%), Gaps = 25/448 (5%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
E + ++L MY K GS+ + V M ++VI+W T+I G +N L + L +
Sbjct: 485 LETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFA 544
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M+ +PD T ++ +C+ LA L +G++IH ++ G S D V ++++ MY +CG
Sbjct: 545 EMQRES-KPDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCG 603
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
L + F D+V W+ MIA YG HG G EAIN F QM E ++V+F+S+LY
Sbjct: 604 LLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILY 663
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
ACSH GL ++G + F++M K+ + +P LEHY C+VDLL R G L +A I+ MP+K +A
Sbjct: 664 ACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDA 723
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
IW LL C+ H +A ++AE I + P++ YVLL+NI+A A++W+ V + R+ +
Sbjct: 724 TIWGALLCGCRIHHDVKLAEKVAERIFELEPENTGYYVLLANIYAEAEKWEEVQKLRKKI 783
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
+R +KK PG SW+EIK +++ F GD S P++ +I+L L+ L S+MK GY P T +
Sbjct: 784 GQRGLKKNPGCSWIEIKGKINIFVAGDCSKPQAKKIELLLKRLRSKMKEEGYSPKTAYAL 843
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPFKYISEIKN---------------- 405
+ D EKE L HSEKLA+AF G++ + P K I KN
Sbjct: 844 LNADEREKEVALCGHSEKLAMAF-----GMLNLPPGKTIRVTKNLRVCGDCHEMAKFMSK 898
Query: 406 ---REIIVRDASRFHHFRNGKCSCGDYW 430
REII+RD+SRFHHF++G CSC YW
Sbjct: 899 SASREIILRDSSRFHHFKDGSCSCRGYW 926
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 120/245 (48%), Gaps = 3/245 (1%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L MY K G L +V M + V++W ++I G + GL++ + ++ M+ G
Sbjct: 392 NTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVV 451
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
PD S++++C+ L G+ +H + + + V ++L MY++CG + D+
Sbjct: 452 PDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDV 511
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F + DV+ W++MI Y + EA+ LF +M Q+E + + T +L AC+
Sbjct: 512 FSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEM-QRESKPDGTTVACILPACASLAAL 570
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
+KG E ++ + + VVD+ +CG L A +L +P K + + W +++
Sbjct: 571 DKGREIHGYALRNGYSEDKYVT-NAVVDMYVKCGLLVLARSLFDMIPNK-DLVSWTVMIA 628
Query: 250 ACKTH 254
H
Sbjct: 629 GYGMH 633
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 149/317 (47%), Gaps = 8/317 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +D + G L MY+K G L EG V + + W +I+ + +G + ++ +
Sbjct: 180 GVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLF 239
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M +G +P+ TF S++ + +A + +G+Q+H + K G + V++SLIS Y
Sbjct: 240 KQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVG 299
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
+ + K F E DV+ W+SMI+ Y +G + I +F +M + + T V++
Sbjct: 300 RKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVF 359
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC++ G G +K + ++D+ +CG L+ A + M K
Sbjct: 360 VACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKT- 418
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLS--NIHASAKRWQGVSE 296
+ W ++++ +D A ++ +E+ GV P A +L+ I+ + K + V +
Sbjct: 419 VVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHD 478
Query: 297 FREAMRERNVKKEPGVS 313
+ +RE N++ VS
Sbjct: 479 Y---IRENNLETNSFVS 492
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 91/174 (52%), Gaps = 10/174 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ D +++ MY+K G LV + ++P +++++W +IAG +G + ++ +
Sbjct: 584 GYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTF 643
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV--ISSLISMYS 118
N MRM G PD+++F+S++ +CS L +G +I ++K ++ + + ++ + +
Sbjct: 644 NQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIF-NIMKKECQIEPNLEHYACMVDLLA 702
Query: 119 RCGCLDDSVKTFLECE--YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFE 170
R G L + K F++ D +W +++ H + L E++ ++ FE
Sbjct: 703 RTGNLVKAHK-FIKAMPIKPDATIWGALLCGCRIH----HDVKLAEKVAERIFE 751
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 66/127 (51%)
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
+ S++ C+E ++ G+++ + + +G +D + L+ MY +CG L + F +
Sbjct: 153 YCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLS 212
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGME 194
S + LW+ MI+ Y G E+INLF+QM + + N TF S+L + E+G +
Sbjct: 213 ESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQ 272
Query: 195 FFDLMVK 201
L+ K
Sbjct: 273 VHGLICK 279
>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Cucumis sativus]
Length = 816
Score = 347 bits (889), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 167/436 (38%), Positives = 274/436 (62%), Gaps = 15/436 (3%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L MY K E +K+ + ++ + W +I+ Q G E+ ++ ++ MR G
Sbjct: 381 NALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVP 440
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
D+ TF S++ +C+ LA++ G+Q+H+ ++++G +V S+L+ Y++CGC+ D++K+
Sbjct: 441 ADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKS 500
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F E + V W+++I+AY +G + +N F+QM Q ++ + V+F+S+L ACSHCG
Sbjct: 501 FGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFV 560
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
E+ + F+ M + Y P+ EHYT +VD+L R G DEA L+ MP + + I+W ++L+
Sbjct: 561 EEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLN 620
Query: 250 ACKTHKSTDMAGRIAEEILGV-NPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKK 308
+C+ HK+ ++A + A+ + + + +DAAPY+ +SNI+A A +W V++ ++AMR+R V+K
Sbjct: 621 SCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRK 680
Query: 309 EPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEE 368
P SW+EIK+Q H F+ DKSHP +I + L+ EM+ +GY PDT +HD+D
Sbjct: 681 VPAYSWVEIKHQTHVFSANDKSHPEMKKILRKINALSKEMEKKGYKPDTTCALHDVDEVI 740
Query: 369 KEYNLKHHSEKLAIAFA----EHTRGLIVM----------LPFKYISEIKNREIIVRDAS 414
K +LK+HSE+ AIAFA ++VM K IS+I REIIVRD+S
Sbjct: 741 KIESLKYHSERFAIAFALMNTPDGSPIVVMKNLRACTDCHAAIKVISQIVEREIIVRDSS 800
Query: 415 RFHHFRNGKCSCGDYW 430
RFHHF++G CSCGDYW
Sbjct: 801 RFHHFKDGVCSCGDYW 816
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 125/258 (48%), Gaps = 2/258 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
F ++ G++L Y K + E K+ MP + I++ +I A NG ++ D +
Sbjct: 271 NFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLF 330
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
++ F + F +++S + L G+QIH + + GA+ + V ++L+ MY++C
Sbjct: 331 RKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKC 390
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
++ K F V W++MI+AY GK EE IN+F M + A+ TF S+L
Sbjct: 391 NGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASIL 450
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC++ G + L+++ + + ++D +CG + +A MP + N
Sbjct: 451 RACANLASISLGRQLHSLLIRS-GFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPER-N 508
Query: 241 AIIWKTLLSACKTHKSTD 258
++ W L+SA + + D
Sbjct: 509 SVSWNALISAYAQNGNVD 526
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 125/261 (47%), Gaps = 24/261 (9%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+E +L+ +SL Y K+ L ++ + M ++ + + +L+ G + GL E+ ++ +
Sbjct: 170 GYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELF 229
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ G +P TF +++S+ L GQQ+H V+K +V V ++L+ YS+
Sbjct: 230 LELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKH 289
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
+D+ K F E D + ++ +I +Y ++G+ +E+ +LF +++ F+ F +LL
Sbjct: 290 DQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLL 349
Query: 181 YACS-----------HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAA 229
+ HC G F + R+E+ +VD+ +C EA
Sbjct: 350 SIATSSLNLRMGRQIHCQAITVGANF----------ESRVEN--ALVDMYAKCNGDKEAQ 397
Query: 230 ALIRNMPVKANAIIWKTLLSA 250
+ N+ K+ + W ++SA
Sbjct: 398 KIFDNIACKS-TVPWTAMISA 417
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 84/167 (50%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
++K G L + ++ M R ++W LI G Q+ +++ Y MR G PD +T
Sbjct: 84 HLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTL 143
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
V+++S EL T QIH V+K G ++ V +SL+ Y + CL + + F
Sbjct: 144 VTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLN 203
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
D V ++S++ Y G EEAI LF ++ + +D TF +LL A
Sbjct: 204 KDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSA 250
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF ++ +GS+L Y K G + + K MP RN ++W LI+ AQNG + L+ +
Sbjct: 473 GFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSF 532
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQG-------QQIHAEVVKAGASLDVGVISSL 113
M G++PD ++F+SV+S+CS + + QI+ K +S+
Sbjct: 533 QQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREH------YTSM 586
Query: 114 ISMYSRCGCLDDSVKTFLECEYSDV-VLWSSMIAAYGFHGKGEEA 157
+ + R G D++ K E + ++WSS++ + H E A
Sbjct: 587 VDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELA 631
>gi|115471645|ref|NP_001059421.1| Os07g0299800 [Oryza sativa Japonica Group]
gi|34394298|dbj|BAC84780.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610957|dbj|BAF21335.1| Os07g0299800 [Oryza sativa Japonica Group]
Length = 673
Score = 347 bits (889), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 177/448 (39%), Positives = 283/448 (63%), Gaps = 19/448 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGS--LVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLD 58
GFE + +++ Y K GS L KV M R+V++W ++IA AQNG++ + +
Sbjct: 227 GFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTME-RDVVSWNSMIALYAQNGMSAEAIG 285
Query: 59 QYNLMRMVG--FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISM 116
Y+ M VG + + + +V+ +C+ + G++IH +VV+ G +V V +S++ M
Sbjct: 286 LYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDM 345
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
YS+CG ++ + + F + + +++ WS+MI YG HG+G+EA+ +F +M++ N +TF
Sbjct: 346 YSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITF 405
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
+S+L ACSH GL ++G +++ M +++ + +EHY C+VDLLGR G LDEA +LI+ M
Sbjct: 406 ISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMK 465
Query: 237 VKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSE 296
VK +A IW LLSAC+ HK+ ++A + + ++ ++ YVLLSNI+A A+ W+ V
Sbjct: 466 VKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAEARMWKDVER 525
Query: 297 FREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPD 356
R ++ R ++K PG S E+K +++ F +GDKSHP+ +EI YLE+L M+ GYVP+
Sbjct: 526 IRLLVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKLLERMQEAGYVPN 585
Query: 357 TGADMHDMDSEEKEYNLKHHSEKLAIAFA---EHTRGLIVML-----------PFKYISE 402
TG+ +HD+D EEKE L+ HSEKLA+AFA R +I ++ K+I++
Sbjct: 586 TGSVLHDLDEEEKESALRIHSEKLAVAFALMNSVPRSVIHIIKNLRVCSDCHTAMKFITK 645
Query: 403 IKNREIIVRDASRFHHFRNGKCSCGDYW 430
I REII+RD RFHHF++G CSC DYW
Sbjct: 646 ITEREIIIRDLQRFHHFKDGLCSCRDYW 673
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 116/258 (44%), Gaps = 7/258 (2%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F D + S+L HMY ++ + +P N + + +G +N L L+ +
Sbjct: 125 FPSDPYSASALLHMYHHCSRPMDARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFR 184
Query: 62 LMRMVGFRP--DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
M D+ + S+ + + G +HA + K G + GV+++++ Y++
Sbjct: 185 AMIASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAK 244
Query: 120 CGCLDDSV-KTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQ--KEFEANDVTF 176
G D V + + DVV W+SMIA Y +G EAI L+ +M + N V
Sbjct: 245 GGSRDLEVARKVFDTMERDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVAL 304
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
++L AC+H G + G + +V+ + + T +VD+ +CG ++ A+ R +
Sbjct: 305 SAVLLACAHAGAIQTGKRIHNQVVRMGLEE-NVYVGTSIVDMYSKCGRVEMASRAFRKIK 363
Query: 237 VKANAIIWKTLLSACKTH 254
K N + W +++ H
Sbjct: 364 EK-NILSWSAMITGYGMH 380
>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial-like [Vitis vinifera]
Length = 678
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 184/441 (41%), Positives = 264/441 (59%), Gaps = 15/441 (3%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
+D++ +SL MY K+G L V R M +NVI+W LI+G AQNG A + L M
Sbjct: 239 MDVIVQTSLVDMYAKNGHLELASCVFRRMLYKNVISWSALISGFAQNGFAGNALQLVVDM 298
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
+ G++PD ++ VSV+ +CS++ L G+ +H +V+ D +++I MYS+CG L
Sbjct: 299 QSFGYKPDSVSLVSVLLACSQVGFLKLGKSVHGYIVRR-LHFDCVSSTAVIDMYSKCGSL 357
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
+ F + + D + W+++IA+YG HG GEEA++LF QM + + + TF SLL A
Sbjct: 358 SFARTVFDQISFRDSISWNAIIASYGIHGSGEEALSLFLQMRETNVKPDHATFASLLSAF 417
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
SH GL EKG +F +MV +Y+ +P +HY C+VDLL R G ++EA LI +M + I
Sbjct: 418 SHSGLVEKGRYWFSIMVNEYKIQPSEKHYACMVDLLSRAGRVEEAQELIESMITEPGIAI 477
Query: 244 WKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
W LLS C H + A+++L +NP D Y L+SN A+A+RW V+E R+ M++
Sbjct: 478 WVALLSGCLNHGKFLIGEMAAKKVLELNPDDPGIYSLVSNFFATARRWDEVAEVRKIMKK 537
Query: 304 RNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHD 363
+KK PG S +E+ ++H F M DKSH + EI L +L EMK GYVP T +H+
Sbjct: 538 TGMKKVPGYSVMEVNGKLHAFLMEDKSHHQYEEIMQVLGKLDYEMKAMGYVPKTEFVLHN 597
Query: 364 MDSEEKEYNLKHHSEKLAIAF-----AEHTRGLIVM---------LPFKYISEIKNREII 409
++ E KE L +HSE+LAIAF TR LI K+IS+I NREI+
Sbjct: 598 LEEEVKERMLCNHSERLAIAFGLLNTGPGTRLLITKNLRVCGDCHEATKFISKIVNREIV 657
Query: 410 VRDASRFHHFRNGKCSCGDYW 430
VRD RFHHF++G CSCGDYW
Sbjct: 658 VRDVKRFHHFKDGVCSCGDYW 678
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 142/289 (49%), Gaps = 15/289 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ D+ G+++ ++Y K G + E +V M R+++ W T+I G AQNG A + +D Y
Sbjct: 135 GYGDDVFVGAAVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIY 194
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M D + + +I +C+ L G IH +++ +DV V +SL+ MY++
Sbjct: 195 RQMHKKRVEGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKN 254
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L+ + F Y +V+ WS++I+ + +G A+ L M+ ++ + V+ VS+L
Sbjct: 255 GHLELASCVFRRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVL 314
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC-----VVDLLGRCGYLDEAAALIRNM 235
ACS G + G +V++ H+ C V+D+ +CG L A + +
Sbjct: 315 LACSQVGFLKLGKSVHGYIVRRL-------HFDCVSSTAVIDMYSKCGSLSFARTVFDQI 367
Query: 236 PVKANAIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLS 282
+ ++I W ++++ H S + A + ++ V P A LLS
Sbjct: 368 SFR-DSISWNAIIASYGIHGSGEEALSLFLQMRETNVKPDHATFASLLS 415
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 124/243 (51%), Gaps = 2/243 (0%)
Query: 8 AGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVG 67
+ + L Y + G + +V P V AW +I ++ G + L Y+ M G
Sbjct: 41 SNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRGAMFEALSLYHRMASEG 100
Query: 68 FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV 127
RPD T+ V+ +C+ L G++ + V G DV V ++++++Y++CG +D+++
Sbjct: 101 VRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGAAVLNLYAKCGKMDEAM 160
Query: 128 KTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCG 187
+ F + D+V W++MI +G+ EA++++ QM +K E + V + L+ AC+ G
Sbjct: 161 RVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQACTTLG 220
Query: 188 LKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTL 247
+ G+ M++K + T +VD+ + G+L+ A+ + R M K N I W L
Sbjct: 221 HSKMGLSIHGYMIRKDIIMDVIVQ-TSLVDMYAKNGHLELASCVFRRMLYK-NVISWSAL 278
Query: 248 LSA 250
+S
Sbjct: 279 ISG 281
>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
Length = 714
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 168/435 (38%), Positives = 270/435 (62%), Gaps = 14/435 (3%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+SL +MY K G L ++ MP+R++++W +++ NG AE +D +NLM+ G
Sbjct: 280 NSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGIN 339
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
PD+ T V+++ +C++ Q + IHA + + G + D+ + ++L+++Y++ G L+ S
Sbjct: 340 PDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDI 399
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F E + D + W++M+A Y H G EAI LF+ M ++ E + VTF LL ACSH GL
Sbjct: 400 FEEIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLV 459
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
E+G ++F++M + YR +PRL+HY+C+VDLLGR G L++A LI++MP++ ++ +W LL
Sbjct: 460 EEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLG 519
Query: 250 ACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKE 309
AC+ + + ++ +AE++L ++P D Y++LSNI+++A W+ S+ R M+ER + +
Sbjct: 520 ACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRXASKVRXLMKERRLTRN 579
Query: 310 PGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEK 369
PG S++E N++H+F +GD+ HPRS EI LEEL ++ G P T +HD+D E K
Sbjct: 580 PGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIXEAGCAPKTEFVLHDIDEEVK 639
Query: 370 EYNLKHHSEKLAIAFAEHTRGLIVMLPF--------------KYISEIKNREIIVRDASR 415
+ HSEKLAIAF G V L K+ S ++ R II+RD+ R
Sbjct: 640 VDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSKR 699
Query: 416 FHHFRNGKCSCGDYW 430
FHHF +G CSC DYW
Sbjct: 700 FHHFADGLCSCRDYW 714
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 130/251 (51%), Gaps = 3/251 (1%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D G L MY K G + +++ MP R++++W +L++G + G L+ + MR
Sbjct: 173 DGFIGDRLVSMYFKLGYDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGYLGACLNAFCRMR 232
Query: 65 M-VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
G +P+++T +SV+S+C+ + L +G+ +H VVK G S V++SLI+MY + G L
Sbjct: 233 TESGRQPNEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFL 292
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
D + + F E +V W+SM+ + +G E+ ++LF M++ + T V+LL AC
Sbjct: 293 DAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRAC 352
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
+ GL + E + + + T +++L + G L+ + + + + + I
Sbjct: 353 TDTGLGRQA-ESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDR-DTIA 410
Query: 244 WKTLLSACKTH 254
W +L+ H
Sbjct: 411 WTAMLAGYAVH 421
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 103/212 (48%), Gaps = 10/212 (4%)
Query: 74 TFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLEC 133
+ V ISSC+ ++ IHA V+K+ D + L+SMY + G +D+ + F E
Sbjct: 144 SLVFAISSCTSVSYC---SAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEM 200
Query: 134 EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE-FEANDVTFVSLLYACSHCGLKEKG 192
D+V W+S+++ G +N F +M + + N+VT +S++ AC+ G ++G
Sbjct: 201 PNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEG 260
Query: 193 MEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACK 252
++V K + + ++++ G+ G+LD A+ L MPV++ + W +++
Sbjct: 261 KSLHGVVV-KLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRS-LVSWNSMV-VIH 317
Query: 253 THKSTDMAGRIAEEIL---GVNPQDAAPYVLL 281
H G ++ G+NP A LL
Sbjct: 318 NHNGYAEKGMDLFNLMKRAGINPDQATMVALL 349
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 84/169 (49%), Gaps = 8/169 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D++ ++L ++Y K G L E + + R+ IAW ++AG A + + + +
Sbjct: 372 GFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDTIAWTAMLAGYAVHACGREAIKLF 431
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQ---QIHAEVVKAGASLDVGVISSLISMY 117
+LM G D +TF ++S+CS + +G+ +I +EV + LD S ++ +
Sbjct: 432 DLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLD--HYSCMVDLL 489
Query: 118 SRCGCLDDSVKTF--LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM 164
R G L+D+ + + E S V W +++ A +G E + EQ+
Sbjct: 490 GRSGRLEDAYELIKSMPMEPSSGV-WGALLGACRVYGNVELGKEVAEQL 537
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 179/436 (41%), Positives = 265/436 (60%), Gaps = 26/436 (5%)
Query: 15 MYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVG-FRPDKI 73
MY K G L KV ++P+++VI+W TLI G AQNGLA + ++ Y +M P++
Sbjct: 229 MYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQG 288
Query: 74 TFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLEC 133
T+VS++ + + + L QG +IH V+K LDV V + LI +Y +CG L D++ F +
Sbjct: 289 TWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQV 348
Query: 134 EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGM 193
V W+++I+ +G HG E+ + LF +M + + + VTFVSLL ACSH G E+G
Sbjct: 349 PQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGK 408
Query: 194 EFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKT 253
F LM ++Y KP L+HY C+VDLLGR GYL+ A I++MP++ +A IW LL AC+
Sbjct: 409 WCFRLM-QEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRI 467
Query: 254 HKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVS 313
H + ++ ++ + V+ ++ YVLLSNI+A+ +W+GV + R RER +KK PG S
Sbjct: 468 HGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWS 527
Query: 314 WLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNL 373
+E+ +V F G++SHP+ EI L LT++MK GY+PD + D++ +EKE+ L
Sbjct: 528 TIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHIL 587
Query: 374 KHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREIIVRDAS 414
HSE+LAIAF G+I P K+IS I REI+VRD++
Sbjct: 588 TSHSERLAIAF-----GIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSN 642
Query: 415 RFHHFRNGKCSCGDYW 430
RFHHF++G CSCGDYW
Sbjct: 643 RFHHFKDGICSCGDYW 658
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 149/312 (47%), Gaps = 41/312 (13%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ ++ +SL HMY + G + MP R++ +W +I+G QNG A LD
Sbjct: 145 GFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVL 204
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ MR+ G K+ FV+V+S ++ + MY++
Sbjct: 205 DEMRLEGI---KMNFVTVVS----------------------------ILPVFVDMYAKL 233
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQ-KEFEANDVTFVSL 179
G LD + K F DV+ W+++I Y +G EAI +++ ME+ KE N T+VS+
Sbjct: 234 GLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSI 293
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY--TCVVDLLGRCGYLDEAAALIRNMPV 237
L A +H G ++GM+ ++K L+ + TC++D+ G+CG L +A +L +P
Sbjct: 294 LPAYAHVGALQQGMKIHGRVIKT---NLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVP- 349
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVS 295
+ +++ W ++S H + ++ E+L GV P LLS S +G
Sbjct: 350 QESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKW 409
Query: 296 EFREAMRERNVK 307
FR M+E +K
Sbjct: 410 CFR-LMQEYGIK 420
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 107/242 (44%), Gaps = 37/242 (15%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNG-LAEDVLDQYNLMRMVGF 68
+ L ++Y G + +P ++V AW ++I+ NG E + Y L+ +
Sbjct: 55 TRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEI 114
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
RPD TF V+ +C TL G++IH K G +V V +SLI MYSR G +
Sbjct: 115 RPDFYTFPPVLKAC---GTLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARS 171
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F + + D+ W++MI+ +G +A+++ ++M + + N VT VS+L
Sbjct: 172 LFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSIL-------- 223
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
VD+ + G LD A + +PVK + I W TL+
Sbjct: 224 ------------------------PVFVDMYAKLGLLDSAHKVFEIIPVK-DVISWNTLI 258
Query: 249 SA 250
+
Sbjct: 259 TG 260
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 80/180 (44%), Gaps = 3/180 (1%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
LD+ + L +Y K G LV+ + +P + + W +I+ +G AE L +
Sbjct: 318 LHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFG 377
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M G +PD +TFVS++S+CS + +G+ + + G + ++ + R G
Sbjct: 378 EMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAG 437
Query: 122 CLDDSVKTFLECEYS-DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
L+ + + D +W +++ A HG E + F E ++ +V + LL
Sbjct: 438 YLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIE--LGKFASDRLFEVDSKNVGYYVLL 495
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 82/183 (44%), Gaps = 22/183 (12%)
Query: 94 IHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGK 153
+HA +V AG + + + L+++Y+ G + S TF + DV W+SMI+AY +G
Sbjct: 38 LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGH 97
Query: 154 GEEAINLFEQMEQ-KEFEANDVTFVSLLYACS--------HCGLKEKGMEFFDLMVKKYR 204
EAI F Q+ E + TF +L AC HC + G + +++ V
Sbjct: 98 FHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRKIHCWAFKLGFQ-WNVFVA--- 153
Query: 205 RKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIA 264
++ + R G+ A +L +MP + + W ++S + + A +
Sbjct: 154 --------ASLIHMYSRFGFTGIARSLFDDMPFR-DMGSWNAMISGLIQNGNAAQALDVL 204
Query: 265 EEI 267
+E+
Sbjct: 205 DEM 207
>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
Length = 781
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 177/450 (39%), Positives = 270/450 (60%), Gaps = 25/450 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G++ D V ++L +Y + + + K+ M ++VI W + AQNG ++ L +
Sbjct: 337 GYDRDAVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLF 396
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M++ G RP T V+V+ +C+ LA L +G+QIH+ +++ +++ V ++LI+MY +C
Sbjct: 397 QEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVETALINMYGKC 456
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + +++ F + D+++W+SM+ AY HG +E + LF QM+ +A+ V+FVS+L
Sbjct: 457 GKMAEAMSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSVL 516
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP-VKA 239
A SH G G ++F M++ + P E Y CVVDLLGR G + EA ++ +
Sbjct: 517 SALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLP 576
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
+ I+W TLL AC+TH TD A AE++L +P + YV+LSN++A+A W GV+ R+
Sbjct: 577 DGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRK 636
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
MR R VKKEPG S +EI N+VH+F GD+SHPR I L+ L SEM+ GY+PDT
Sbjct: 637 LMRSRGVKKEPGRSSIEILNRVHEFLEGDRSHPRRHPIYAELDVLNSEMRAAGYIPDTKM 696
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYI 400
+HD++ E KE L +HSE+LAIAF GLI P KYI
Sbjct: 697 ILHDVEDERKEDMLFYHSERLAIAF-----GLISTPPGTPLRVIKNLRVCSDCHTATKYI 751
Query: 401 SEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
S+++ REI+VRD RFH+F++G+CSC DYW
Sbjct: 752 SKLRGREILVRDTHRFHNFKDGRCSCKDYW 781
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 158/311 (50%), Gaps = 6/311 (1%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E D+ +S +M+ +G L + ++ M R+V+ W +I QN + + +
Sbjct: 238 ESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGR 297
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
++ G + + ITFV +++ + L +L +G+ IH V +AG D V ++L+S+Y RC
Sbjct: 298 LQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEA 357
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
+ K F++ DV+ W+ M AY +G +EA+ LF++M+ + T V++L
Sbjct: 358 PGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDT 417
Query: 183 CSHCGLKEKGMEFFDLMVK-KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
C+H +KG + +++ ++R + +E T ++++ G+CG + EA ++ M K +
Sbjct: 418 CAHLAALQKGRQIHSHIIENRFRMEMVVE--TALINMYGKCGKMAEAMSVFEKM-AKRDI 474
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEI-LGVNPQDAAPYV-LLSNIHASAKRWQGVSEFRE 299
++W ++L A H D ++ ++ L DA +V +LS + S G F
Sbjct: 475 LVWNSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSVLSALSHSGSVTDGYQYFVA 534
Query: 300 AMRERNVKKEP 310
+++ ++ P
Sbjct: 535 MLQDFSITPTP 545
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 146/291 (50%), Gaps = 9/291 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE + + L MY + GS+ E ++V ++ ++V AW +I Q G + L +
Sbjct: 34 GFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILERKDVFAWTRMIGIYCQQGDYDRALGMF 93
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ P K+T+V+++++C+ +L G +IH ++++ G DV V ++LI+MY++C
Sbjct: 94 YQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKC 153
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + +F E+ DVV W++MIAA H + A L+ +M+ N +T ++
Sbjct: 154 GSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVF 213
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
A +G +F +V + + V++ G G L +A L +M V +
Sbjct: 214 NAYGDPNYLSEG-KFVYGLVSSGVMESDVRVMNSAVNMFGNAGLLGDARRLFEDM-VDRD 271
Query: 241 AIIWKTLLSACKTH----KSTDMAGRIAEEILGVNPQDAAPYVLLSNIHAS 287
+ W +++ + ++ + GR+ ++ GV D +VL+ N++ S
Sbjct: 272 VVTWNIVITLYVQNENFGEAVRLFGRLQQD--GVKANDIT-FVLMLNVYTS 319
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 104/216 (48%), Gaps = 4/216 (1%)
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
+PD FV+++ CS + G+++H V G + V LI MY++CG + ++ +
Sbjct: 1 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 60
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F E DV W+ MI Y G + A+ +F QM++++ VT+V++L AC+
Sbjct: 61 VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 120
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
+ GME ++++ T ++++ +CG + A + + + + + W ++
Sbjct: 121 LKDGMEIHGQILQQGFEGDVFVG-TALINMYNKCGSVRGAWDSFKRLEHR-DVVSWTAMI 178
Query: 249 SACKTHKSTDMAGRIAE--EILGVNPQDAAPYVLLS 282
+AC H +A + ++ GV P Y + +
Sbjct: 179 AACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFN 214
>gi|125584568|gb|EAZ25232.1| hypothetical protein OsJ_09035 [Oryza sativa Japonica Group]
Length = 674
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 177/448 (39%), Positives = 283/448 (63%), Gaps = 19/448 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGS--LVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLD 58
GFE + +++ Y K GS L KV M R+V++W ++IA AQNG++ + +
Sbjct: 228 GFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTME-RDVVSWNSMIALYAQNGMSAEAIG 286
Query: 59 QYNLMRMVG--FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISM 116
Y+ M VG + + + +V+ +C+ + G++IH +VV+ G +V V +S++ M
Sbjct: 287 LYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDM 346
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
YS+CG ++ + + F + + +++ WS+MI YG HG+G+EA+ +F +M++ N +TF
Sbjct: 347 YSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITF 406
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
+S+L ACSH GL ++G +++ M +++ + +EHY C+VDLLGR G LDEA +LI+ M
Sbjct: 407 ISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMK 466
Query: 237 VKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSE 296
VK +A IW LLSAC+ HK+ ++A + + ++ ++ YVLLSNI+A A+ W+ V
Sbjct: 467 VKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAEARMWKDVER 526
Query: 297 FREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPD 356
R ++ R ++K PG S E+K +++ F +GDKSHP+ +EI YLE+L M+ GYVP+
Sbjct: 527 IRLLVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKLLERMQEAGYVPN 586
Query: 357 TGADMHDMDSEEKEYNLKHHSEKLAIAFA---EHTRGLIVML-----------PFKYISE 402
TG+ +HD+D EEKE L+ HSEKLA+AFA R +I ++ K+I++
Sbjct: 587 TGSVLHDLDEEEKESALRIHSEKLAVAFALMNSVPRSVIHIIKNLRVCSDCHTAMKFITK 646
Query: 403 IKNREIIVRDASRFHHFRNGKCSCGDYW 430
I REII+RD RFHHF++G CSC DYW
Sbjct: 647 ITEREIIIRDLQRFHHFKDGLCSCRDYW 674
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 90/187 (48%), Gaps = 5/187 (2%)
Query: 71 DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV-KT 129
D+ + S+ + + G +HA + K G + GV+++++ Y++ G D V +
Sbjct: 197 DEAAALVAFSASARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARK 256
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQ--KEFEANDVTFVSLLYACSHCG 187
+ DVV W+SMIA Y +G EAI L+ +M + N V ++L AC+H G
Sbjct: 257 VFDTMERDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAG 316
Query: 188 LKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTL 247
+ G + +V+ + + T +VD+ +CG ++ A+ R + K N + W +
Sbjct: 317 AIQTGKRIHNQVVRMGLEE-NVYVGTSIVDMYSKCGRVEMASRAFRKIKEK-NILSWSAM 374
Query: 248 LSACKTH 254
++ H
Sbjct: 375 ITGYGMH 381
>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 175/434 (40%), Positives = 255/434 (58%), Gaps = 24/434 (5%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y+K G ++ MP R+V++W +I G Q ++ L + M P++
Sbjct: 212 YLKCGVFKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIEPNESVL 271
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
V+ +S+C+ L + QGQ I + + L V + ++LI MYS+CG ++ +++ F + +
Sbjct: 272 VNALSACAHLGAMEQGQWIERYMERKNVRLTVRLGTALIDMYSKCGSVERALEVFHKMKE 331
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
+V+ WS+MI +G+G++A+NLF QME + + N+VTF+ +L ACSH L ++G F
Sbjct: 332 KNVLAWSAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSF 391
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK 255
F M Y KP H+ C+VDL GR G LD+A +I++MP K N+ IW LL+AC+ H
Sbjct: 392 FHSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGALLNACRIHG 451
Query: 256 STDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWL 315
T++ ++ + +L ++P YVLLSNI+A+ RW V+E R MRER V K PG S++
Sbjct: 452 DTELGEQVGKRLLELDPNHGGRYVLLSNIYAACGRWDRVAELRRMMRERQVSKTPGCSFI 511
Query: 316 EIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKH 375
++ + +H+F GD SHP+ I L E++ E+K GY PDTG + DMD EEKE L H
Sbjct: 512 DLGDTIHEFVAGDSSHPQLEMIYAKLGEMSQELKAAGYKPDTGQVLLDMDEEEKETALCH 571
Query: 376 HSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREIIVRDASRF 416
HSEKLAIAF GLI P K IS+I NREIIVRD RF
Sbjct: 572 HSEKLAIAF-----GLIKTDPGTTIRITKNLRVCADCHSATKLISKIYNREIIVRDRCRF 626
Query: 417 HHFRNGKCSCGDYW 430
HHFR+G CSC D+W
Sbjct: 627 HHFRDGSCSCMDFW 640
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 118/262 (45%), Gaps = 37/262 (14%)
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS--- 126
PD TF ++ +CSE+ +L G+ IH+ V K G S +V V + L+ MY+ CG ++ +
Sbjct: 134 PDVHTFPLLLKACSEIPSLRLGEAIHSHVFKLGWSSEVSVSNFLVQMYASCGLIESAGLV 193
Query: 127 ---------------VKTFLECEY-------------SDVVLWSSMIAAYGFHGKGEEAI 158
+ +L+C DVV WS MI Y + +E +
Sbjct: 194 FDRTPECDGASWNIMIGGYLKCGVFKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGL 253
Query: 159 NLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKK-YRRKPRLEHYTCVVD 217
LF+ M ++ E N+ V+ L AC+H G E+G M +K R RL T ++D
Sbjct: 254 GLFQDMMGEKIEPNESVLVNALSACAHLGAMEQGQWIERYMERKNVRLTVRLG--TALID 311
Query: 218 LLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH-KSTDMAGRIAE-EILGVNPQDA 275
+ +CG ++ A + M K N + W +++ + + D ++ E+ GV P +
Sbjct: 312 MYSKCGSVERALEVFHKMKEK-NVLAWSAMINGLAINGQGKDALNLFSQMEMQGVKPNEV 370
Query: 276 APYVLLSNIHASAKRWQGVSEF 297
+L+ S +G S F
Sbjct: 371 TFIGILNACSHSKLVDEGCSFF 392
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 99/206 (48%), Gaps = 13/206 (6%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
L + G++L MY K GS+ +V M +NV+AW +I G A NG +D L+ ++ M
Sbjct: 301 LTVRLGTALIDMYSKCGSVERALEVFHKMKEKNVLAWSAMINGLAINGQGKDALNLFSQM 360
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQ-IHAEVVKAGASLDVGVISSLISMYSRCGC 122
M G +P+++TF+ ++++CS + +G H+ G + ++ +Y R G
Sbjct: 361 EMQGVKPNEVTFIGILNACSHSKLVDEGCSFFHSMTSIYGLKPNAHHHCCMVDLYGRAGM 420
Query: 123 LDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEAND-----VTF 176
LD + + + +W +++ A HG E L EQ+ ++ E +
Sbjct: 421 LDQAQTVIKSMPFKPNSAIWGALLNACRIHGDTE----LGEQVGKRLLELDPNHGGRYVL 476
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKK 202
+S +YA CG ++ E +M ++
Sbjct: 477 LSNIYAA--CGRWDRVAELRRMMRER 500
>gi|222641236|gb|EEE69368.1| hypothetical protein OsJ_28705 [Oryza sativa Japonica Group]
Length = 662
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 185/446 (41%), Positives = 265/446 (59%), Gaps = 25/446 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM- 63
D V +++ YM G++V+ + MP+RN+++W ++AG +N A+D L + M
Sbjct: 222 DAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMV 281
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
R +P+ T SV+ CS L+ LG G+QIH +K S ++ V +SL+SMY +CG L
Sbjct: 282 REANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDL 341
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
+ K F E DVV W++MI+ Y HG G+EAINLFE+M+ + E N +TFV++L AC
Sbjct: 342 SSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTAC 401
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
H GL + G+ F+ M + Y +PR++HY+C+VDLL R G L+ A LIR+MP + +
Sbjct: 402 IHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDLIRSMPFEPHPSA 461
Query: 244 WKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
+ TLL+AC+ +K+ + A A +++ +PQ A YV L+NI+A A +W VS R M++
Sbjct: 462 YGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYAGANQWDDVSRVRRWMKD 521
Query: 304 RNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHD 363
V K PG SW+EIK +H+F D+ HP+ I L +L MK GYVPD +HD
Sbjct: 522 NAVVKTPGYSWIEIKGVMHEFRSNDRLHPQLYLIHEKLGQLAERMKAMGYVPDLDFVLHD 581
Query: 364 MDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIK 404
+D K L HSEKLAI+F GLI P K IS+I+
Sbjct: 582 VDETLKVQMLMRHSEKLAISF-----GLISTAPGMTLRIFKNLRVCGDCHNAAKVISKIE 636
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
+REII+RD +RFHHFR G CSCGDYW
Sbjct: 637 DREIILRDTTRFHHFRGGHCSCGDYW 662
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/274 (20%), Positives = 126/274 (45%), Gaps = 16/274 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D V+ ++L + SG ++ MP+R+V++W T+++G +++G E+ + M
Sbjct: 128 DAVSYNTLLSCHFASGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMP 187
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+ + +++ +++S + + ++ + G D + ++++S Y G +
Sbjct: 188 V----RNSVSWNAMVSGFACSRDMSAAEEWFRNAPEKG---DAVLWTAMVSGYMDIGNVV 240
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM-EQKEFEANDVTFVSLLYAC 183
+++ F ++V W++++A Y + ++A+ LF M + + N T S+L C
Sbjct: 241 KAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGC 300
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
S+ G + +K + L T +V + +CG L A L M + + +
Sbjct: 301 SNLSALGFGKQIHQWCMKLPLSR-NLTVGTSLVSMYCKCGDLSSACKLFGEMHTR-DVVA 358
Query: 244 WKTLLSACKTH----KSTDMAGRIAEEILGVNPQ 273
W ++S H ++ ++ R+ +E GV P
Sbjct: 359 WNAMISGYAQHGDGKEAINLFERMKDE--GVEPN 390
>gi|449479601|ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 663
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 176/445 (39%), Positives = 267/445 (60%), Gaps = 15/445 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ D+ ++L +Y K+ + +KV MP R +IAW +LI+G QNGL ++ + +
Sbjct: 219 GYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLF 278
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+LM GF+PD T VS++SSCS+L L G +H G L+V + +SLI+MY+RC
Sbjct: 279 HLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRC 338
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + + F + +VV W++MI+ YG HG G +A+ LF +M N++TFV++L
Sbjct: 339 GNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVL 398
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRN-MPVKA 239
AC+H GL + G F M + Y P +EH C+VD+ GR G L++A I+ +P +
Sbjct: 399 SACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEP 458
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
+W ++L AC+ H++ D+ ++AE +L V P++ YV+LSNI+A A R V R
Sbjct: 459 GPAVWTSMLGACRMHRNFDLGVKVAEHVLSVEPENPGHYVMLSNIYALAGRMDRVEMVRN 518
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M R +KK+ G S +EI + + F+MGDKSHP++ I YL+EL GYVP +
Sbjct: 519 MMTRRRLKKQVGYSTIEINRKTYLFSMGDKSHPQTNTIYRYLDELMCRCSESGYVPAPES 578
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKN 405
MHD++ EE++Y L++HSEKLA+AF + +G + + K+IS I +
Sbjct: 579 LMHDLEEEERDYALRYHSEKLALAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISIIAD 638
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
REIIVRD RFHHF++G CSC DYW
Sbjct: 639 REIIVRDKFRFHHFKDGSCSCLDYW 663
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 127/272 (46%), Gaps = 18/272 (6%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+ L + +GS+ ++ +P + + +L+ ++ G + D + Y M G
Sbjct: 127 TKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAP 186
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
TF SVI +C++L+ L G++IH+ V+ G D+ V ++LI++Y++ + + K
Sbjct: 187 QSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKV 246
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F ++ W+S+I+ Y +G +E+I LF M + F+ + T VSLL +CS G
Sbjct: 247 FDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGAL 306
Query: 190 EKGMEF--------FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
+ G FDL V T ++++ RCG + +A + +M + N
Sbjct: 307 DFGCWLHDYADGNGFDLNVVL---------GTSLINMYTRCGNVSKAREVFDSMKER-NV 356
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQ 273
+ W ++S H A + E+ P+
Sbjct: 357 VTWTAMISGYGMHGYGRQAMELFTEMRAYGPR 388
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 67/160 (41%), Gaps = 4/160 (2%)
Query: 92 QQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFH 151
QQ+HA ++ +G +++ LIS+ G + + + F D L+ S++
Sbjct: 108 QQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKF 167
Query: 152 GKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFD-LMVKKYRRKPRLE 210
G + + + +M ++ TF S++ AC+ G E +MV Y ++
Sbjct: 168 GFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQ 227
Query: 211 HYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
++ L + + A + MP + I W +L+S
Sbjct: 228 --AALIALYAKASDMKVAKKVFDAMPQRT-IIAWNSLISG 264
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 346 bits (887), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 177/445 (39%), Positives = 276/445 (62%), Gaps = 15/445 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ + G++L Y K G + +KV M ++ I+W ++IA AQ+GL+ + L+ +
Sbjct: 1281 GFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVF 1340
Query: 61 N-LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ ++R VG R + +T +V+ +C+ L G+ IH +V+K +V V +S+I MY +
Sbjct: 1341 HGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCK 1400
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG ++ + KTF + +V W++M+A YG HG+ +EA+++F +M + + N +TFVS+
Sbjct: 1401 CGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSV 1460
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L ACSH GL E+G +F+ M KY +P +EHY C+VDL GR G L+EA LI+ M +K
Sbjct: 1461 LAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKP 1520
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
+ ++W +LL AC+ HK+ D+ A+++ ++P + YVLLSN++A A RW V R
Sbjct: 1521 DFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRM 1580
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M+ R + K PG S +E+K +VH F +GDK HP I YLE+LT E++ GYVP+ +
Sbjct: 1581 LMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGYVPNMTS 1640
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKN 405
+HD+D EEKE L+ HSEKLA+AF G + + K IS++ +
Sbjct: 1641 VLHDVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNLRVCGDCHTVIKLISKLVH 1700
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
R+ +VRD+ RFHHF++G CSCGDYW
Sbjct: 1701 RDFVVRDSKRFHHFKDGVCSCGDYW 1725
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 131/237 (55%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
++V+ +++ + G L E ++ +P +NV++W +I G +N E+ L+ + M+
Sbjct: 190 NVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQ 249
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
P++ T VS+I +C+E+ L G+ IH +K + V + ++LI MYS+CG +
Sbjct: 250 AENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIK 309
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D+++ F + W+SMI + G HG G+EA+NLF +ME+ + + +TF+ +L AC
Sbjct: 310 DAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACV 369
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
H ++G +F M + Y P EHY C+ +L R LDEA + + AN+
Sbjct: 370 HIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKEVGSLANS 426
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 153/330 (46%), Gaps = 29/330 (8%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAE------ 54
GFE DL S+L MY K G L + + +P+RNV++W ++I G QN A+
Sbjct: 1172 GFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLF 1231
Query: 55 -DVLDQYNLMRMVGFRP-DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISS 112
D L++ + P D + VSV+S+CS ++ G + +H VVK G +GV ++
Sbjct: 1232 KDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNT 1291
Query: 113 LISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM-EQKEFEA 171
L+ Y++CG S K F E D + W+SMIA Y G EA+ +F M
Sbjct: 1292 LMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRY 1351
Query: 172 NDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV----VDLLGRCGYLDE 227
N VT ++L AC+H G G D ++K LE+ CV +D+ +CG ++
Sbjct: 1352 NAVTLSAVLLACAHAGALRAGKCIHDQVIKM-----DLEYNVCVGTSIIDMYCKCGRVEM 1406
Query: 228 AAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIH 285
A M K N W +++ H A I +++ GV P Y+ ++
Sbjct: 1407 AKKTFDRMKEK-NVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPN----YITFVSVL 1461
Query: 286 ASAKRWQGVSE---FREAMRERNVKKEPGV 312
A+ V E + AM+ + EPG+
Sbjct: 1462 AACSHAGLVEEGWHWFNAMKHK-YDIEPGI 1490
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 142/323 (43%), Gaps = 44/323 (13%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRN--VIAWITLIAGKAQNGLAEDVLD 58
G D + L H+Y G + ++ I+N W +I NGL+E L
Sbjct: 54 GLSNDQLLTRKLIHLYSTHGRIAYA--ILLFYQIQNPCTFTWNLIIRANTINGLSEQALM 111
Query: 59 QYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
Y M G DK TF VI +C+ ++ G+ +H ++K G S DV V ++LI Y
Sbjct: 112 LYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYF 171
Query: 119 RCG-----------------------------C--LDDSVKTFLECEYSDVVLWSSMIAA 147
+CG C L ++ + F E +VV W++MI
Sbjct: 172 KCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMING 231
Query: 148 YGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKP 207
Y + + EEA+ LF++M+ + N+ T VSL+ AC+ G+ G D +K
Sbjct: 232 YIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCI--- 288
Query: 208 RLEHY--TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAE 265
+ Y T ++D+ +CG + +A + MP K+ W +++++ H A +
Sbjct: 289 EIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLP-TWNSMITSLGVHGLGQEALNLFS 347
Query: 266 EILGVNPQ-DAAPY--VLLSNIH 285
E+ VN + DA + VL + +H
Sbjct: 348 EMERVNVKPDAITFIGVLCACVH 370
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 88/175 (50%), Gaps = 8/175 (4%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
NV +W ++IA A+ G + + L ++ +R +G P + +F I SCS L L G+ H
Sbjct: 1106 NVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSH 1165
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGE 155
+ G D+ V S+LI MYS+CG L D+ F E +VV W+SMI Y + + +
Sbjct: 1166 QQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQAD 1225
Query: 156 EAINLFEQMEQKEFEAND--------VTFVSLLYACSHCGLKEKGMEFFDLMVKK 202
A+ LF+ ++E E D V VS+L ACS K +VKK
Sbjct: 1226 NALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKK 1280
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 67/131 (51%), Gaps = 1/131 (0%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E+ + G++L MY K GS+ + +V MP +++ W ++I +GL ++ L+ ++
Sbjct: 289 EIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSE 348
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVK-AGASLDVGVISSLISMYSRCG 121
M V +PD ITF+ V+ +C + + +G + + G + + +Y+R
Sbjct: 349 MERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSN 408
Query: 122 CLDDSVKTFLE 132
LD++ K+ E
Sbjct: 409 NLDEAFKSTKE 419
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 86/180 (47%), Gaps = 2/180 (1%)
Query: 92 QQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFH 151
+QIHA+++++G S D + LI +YS G + ++ F + + W+ +I A +
Sbjct: 44 RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103
Query: 152 GKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEH 211
G E+A+ L++ M + A+ TF ++ AC++ + G ++ KY +
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLI-KYGFSGDVFV 162
Query: 212 YTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVN 271
++D +CG+ A + M V+ N + W T++S + A RI +EI N
Sbjct: 163 QNNLIDFYFKCGHTRFALKVFEKMRVR-NVVSWTTVISGLISCGDLQEARRIFDEIPSKN 221
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 60/134 (44%), Gaps = 4/134 (2%)
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH-CGLKEKGME 194
S+V W+S+IA G EA+ F + + +F + +CS C L M
Sbjct: 1105 SNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMS 1164
Query: 195 FFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
V + L + ++D+ +CG L +A AL +P++ N + W ++++ +
Sbjct: 1165 HQQAFVFGFETD--LFVSSALIDMYSKCGQLKDARALFDEIPLR-NVVSWTSMITGYVQN 1221
Query: 255 KSTDMAGRIAEEIL 268
+ D A + ++ L
Sbjct: 1222 EQADNALLLFKDFL 1235
>gi|298204516|emb|CBI23791.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 346 bits (887), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 179/444 (40%), Positives = 269/444 (60%), Gaps = 18/444 (4%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ + ++L YMK G + E + M RN+++W +I+G QNG AE L ++ M
Sbjct: 172 DMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEML 231
Query: 65 MVG--FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
G +P+ +T VSV+ +C++ A L +G++IH G L+ V ++L MY++C
Sbjct: 232 QDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYS 291
Query: 123 LDDSVKTF--LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
L ++ F + +++ W++MI AY HG G EA+++FE M + + + VTF+ LL
Sbjct: 292 LVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLL 351
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
CSH GL + G+ F+ M + +PR+EHY CVVDLLGR G L EA LI MP++A
Sbjct: 352 SGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAG 411
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+W LL+AC++H++ ++A A + + P ++ YVLLSN++A A W+ V + R
Sbjct: 412 PSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGMWEEVKKLRAL 471
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
++ + +KK PG SW+EI + H F DKSHP++ EI +LE L ++K+ GY+PDT
Sbjct: 472 LKYQGMKKSPGCSWIEINGKSHLFMGADKSHPQAKEIYKFLEALPEKIKMAGYIPDTSFV 531
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA-EHTRGLIVM-------------LPFKYISEIKNR 406
+HD+ EEKEYNL HSEKLAIAF +TR +V+ K+IS+I R
Sbjct: 532 LHDISEEEKEYNLTTHSEKLAIAFGLLNTRPGVVLRVTKNLRICGDCHAATKFISKIYER 591
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EIIVRD +RFH F++G CSCGDYW
Sbjct: 592 EIIVRDLNRFHCFKDGSCSCGDYW 615
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 118/279 (42%), Gaps = 37/279 (13%)
Query: 57 LDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISM 116
L+ Y M +G D T V+ SC++L+ + G+ +H + ++ G D V +SLI M
Sbjct: 92 LEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDM 151
Query: 117 YSRCGCLDDSVKTFLE-------------------------------CEYSDVVLWSSMI 145
Y +CG + D+ K F + E+ ++V W++MI
Sbjct: 152 YVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMI 211
Query: 146 AAYGFHGKGEEAINLFEQMEQ--KEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKY 203
+ Y +G E+A+ LF++M Q E + N VT VS+L AC+ E+G D
Sbjct: 212 SGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDF-ANGI 270
Query: 204 RRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA-NAIIWKTLLSACKTHKSTDMAGR 262
T + + +C L EA + N I W T+++A +H A
Sbjct: 271 GLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVS 330
Query: 263 IAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
I E +L GV P LLS S G++ F +
Sbjct: 331 IFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFND 369
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 15/129 (11%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPI--RNVIAWITLIAGKAQNGLAEDVLD 58
G L+ ++LA MY K SLVE ++ +N+IAW T+I A +G + +
Sbjct: 271 GLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVS 330
Query: 59 QYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASL--DVGVISSLISM 116
+ M G +PD +TF+ ++S CS H+ ++ AG + D+G I S+
Sbjct: 331 IFENMLRAGVQPDAVTFMGLLSGCS-----------HSGLIDAGLNHFNDMGTIHSVEPR 379
Query: 117 YSRCGCLDD 125
C+ D
Sbjct: 380 VEHYACVVD 388
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 346 bits (887), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 173/449 (38%), Positives = 263/449 (58%), Gaps = 24/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G V S+L +Y K G + MP +N+ W +I G ++ E+ L +
Sbjct: 268 GIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLF 327
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
N M++ G + DK+T S++ +C+ L L G+ +H + K +DV + ++L+ MY++C
Sbjct: 328 NEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKC 387
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ +++ F E DV+ W+++I G+G +A+ LF +M+ E + + +TFV +L
Sbjct: 388 GSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVL 447
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL +G+ +F+ M KY +P +EHY C+VD+LGR G + EA LI+NMP+ +
Sbjct: 448 AACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPD 507
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+ LLSAC+ H + +A R A++++ ++P++ YVLLSNI++S K W+ + RE
Sbjct: 508 YFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMREL 567
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M ERN+KK PG S +E+ VH+F GD SHP+S EI L+++ +K GYVPD
Sbjct: 568 MVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSEV 627
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
+ DMD +EKE L HSEKLAIAF GL+ P K+IS
Sbjct: 628 LFDMDEKEKENELSLHSEKLAIAF-----GLLSTTPGTPIRVVKNLRVCSDCHSAMKFIS 682
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
E+ NREIIVRD +RFHHF G CSC D+W
Sbjct: 683 EVYNREIIVRDRNRFHHFTKGSCSCRDFW 711
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 129/248 (52%), Gaps = 2/248 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D ++L +MY G LV KV M ++V++W T+I AQ L + + +
Sbjct: 167 GFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLF 226
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M + +P++IT V+V+++C+ L +Q+H + + G + S+L+ +Y +C
Sbjct: 227 RRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKC 286
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
GC + F + ++ W+ MI + EEA++LF +M+ + + VT SLL
Sbjct: 287 GCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLL 346
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+H G E G ++ + ++K + + + T +VD+ +CG ++ A + + MP K +
Sbjct: 347 IACTHLGALELG-KWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEK-D 404
Query: 241 AIIWKTLL 248
+ W L+
Sbjct: 405 VMTWTALI 412
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 110/236 (46%), Gaps = 13/236 (5%)
Query: 19 SGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSV 78
SGSL V +P ++I G L + Y LM + G PD+ TF S+
Sbjct: 87 SGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSL 146
Query: 79 ISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDV 138
SC L +G+Q+H K G + D + ++L++MYS CGCL + K F + V
Sbjct: 147 FKSC---GVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSV 203
Query: 139 VLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDL 198
V W++MI AY EAI LF +ME + N++T V++L AC+ E +
Sbjct: 204 VSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQ---- 259
Query: 199 MVKKYRRKPRLEHYT----CVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
V KY + + +T ++D+ +CG A L MP K N W +++
Sbjct: 260 -VHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEK-NLFCWNIMING 313
>gi|27817913|dbj|BAC55678.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|37806252|dbj|BAC99769.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 613
Score = 346 bits (887), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 185/446 (41%), Positives = 265/446 (59%), Gaps = 25/446 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM- 63
D V +++ YM G++V+ + MP+RN+++W ++AG +N A+D L + M
Sbjct: 173 DAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMV 232
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
R +P+ T SV+ CS L+ LG G+QIH +K S ++ V +SL+SMY +CG L
Sbjct: 233 REANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDL 292
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
+ K F E DVV W++MI+ Y HG G+EAINLFE+M+ + E N +TFV++L AC
Sbjct: 293 SSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTAC 352
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
H GL + G+ F+ M + Y +PR++HY+C+VDLL R G L+ A LIR+MP + +
Sbjct: 353 IHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDLIRSMPFEPHPSA 412
Query: 244 WKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
+ TLL+AC+ +K+ + A A +++ +PQ A YV L+NI+A A +W VS R M++
Sbjct: 413 YGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYAGANQWDDVSRVRRWMKD 472
Query: 304 RNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHD 363
V K PG SW+EIK +H+F D+ HP+ I L +L MK GYVPD +HD
Sbjct: 473 NAVVKTPGYSWIEIKGVMHEFRSNDRLHPQLYLIHEKLGQLAERMKAMGYVPDLDFVLHD 532
Query: 364 MDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIK 404
+D K L HSEKLAI+F GLI P K IS+I+
Sbjct: 533 VDETLKVQMLMRHSEKLAISF-----GLISTAPGMTLRIFKNLRVCGDCHNAAKVISKIE 587
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
+REII+RD +RFHHFR G CSCGDYW
Sbjct: 588 DREIILRDTTRFHHFRGGHCSCGDYW 613
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/274 (20%), Positives = 126/274 (45%), Gaps = 16/274 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D V+ ++L + SG ++ MP+R+V++W T+++G +++G E+ + M
Sbjct: 79 DAVSYNTLLSCHFASGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMP 138
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+ + +++ +++S + + ++ + G D + ++++S Y G +
Sbjct: 139 V----RNSVSWNAMVSGFACSRDMSAAEEWFRNAPEKG---DAVLWTAMVSGYMDIGNVV 191
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM-EQKEFEANDVTFVSLLYAC 183
+++ F ++V W++++A Y + ++A+ LF M + + N T S+L C
Sbjct: 192 KAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGC 251
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
S+ G + +K + L T +V + +CG L A L M + + +
Sbjct: 252 SNLSALGFGKQIHQWCMKLPLSR-NLTVGTSLVSMYCKCGDLSSACKLFGEMHTR-DVVA 309
Query: 244 WKTLLSACKTH----KSTDMAGRIAEEILGVNPQ 273
W ++S H ++ ++ R+ +E GV P
Sbjct: 310 WNAMISGYAQHGDGKEAINLFERMKDE--GVEPN 341
>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 346 bits (887), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 168/435 (38%), Positives = 271/435 (62%), Gaps = 14/435 (3%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+SL +MY K G L ++ MP+R++++W +++ NG AE +D +NLM+ G
Sbjct: 203 NSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGIN 262
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
PD+ T V+++ +C++ Q + IHA + + G + D+ + ++L+++Y++ G L+ S
Sbjct: 263 PDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDI 322
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F E + D + W++M+A Y H G EAI LF+ M ++ E + VTF LL ACSH GL
Sbjct: 323 FEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLV 382
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
E+G ++F++M + YR +PRL+HY+C+VDLLGR G L++A LI++MP++ ++ +W LL
Sbjct: 383 EEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLG 442
Query: 250 ACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKE 309
AC+ + + ++ +AE++L ++P D Y++LSNI+++A W+ S+ R M+ER + +
Sbjct: 443 ACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTRN 502
Query: 310 PGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEK 369
PG S++E N++H+F +GD+ HPRS EI LEEL +++ G P T +HD+D E K
Sbjct: 503 PGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIREAGCAPKTEFVLHDIDEEVK 562
Query: 370 EYNLKHHSEKLAIAFAEHTRGLIVMLPF--------------KYISEIKNREIIVRDASR 415
+ HSEKLAIAF G V L K+ S ++ R II+RD+ R
Sbjct: 563 VDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSKR 622
Query: 416 FHHFRNGKCSCGDYW 430
FHHF +G CSC DYW
Sbjct: 623 FHHFADGLCSCRDYW 637
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 131/251 (52%), Gaps = 3/251 (1%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D G L MY K G + +++ MP +++++W +L++G + G L+ + MR
Sbjct: 96 DGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMR 155
Query: 65 M-VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
G +P+++T +SV+S+C+++ L +G+ +H VVK G S V++SLI+MY + G L
Sbjct: 156 TESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFL 215
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
D + + F E +V W+SM+ + +G E+ ++LF M++ + T V+LL AC
Sbjct: 216 DAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRAC 275
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
+ GL + E + + + T +++L + G L+ + + + + + I
Sbjct: 276 TDTGLGRQA-ESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDR-DRIA 333
Query: 244 WKTLLSACKTH 254
W +L+ H
Sbjct: 334 WTAMLAGYAVH 344
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 103/212 (48%), Gaps = 10/212 (4%)
Query: 74 TFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLEC 133
+ V ISSC+ ++ IHA V+K+ D + L+SMY + G +D+ + F E
Sbjct: 67 SLVFAISSCTSVSYC---SAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEM 123
Query: 134 EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE-FEANDVTFVSLLYACSHCGLKEKG 192
D+V W+S+++ G +N F +M + + N+VT +S++ AC+ G ++G
Sbjct: 124 PNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEG 183
Query: 193 MEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACK 252
++V K + + ++++ G+ G+LD A+ L MPV++ + W +++
Sbjct: 184 KSLHGVVV-KLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRS-LVSWNSMV-VIH 240
Query: 253 THKSTDMAGRIAEEIL---GVNPQDAAPYVLL 281
H G ++ G+NP A LL
Sbjct: 241 NHNGYAEKGMDLFNLMKRAGINPDQATMVALL 272
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 84/169 (49%), Gaps = 8/169 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D++ ++L ++Y K G L E + + R+ IAW ++AG A + + + +
Sbjct: 295 GFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLF 354
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQ---QIHAEVVKAGASLDVGVISSLISMY 117
+LM G D +TF ++S+CS + +G+ +I +EV + LD S ++ +
Sbjct: 355 DLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLD--HYSCMVDLL 412
Query: 118 SRCGCLDDSVKTF--LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM 164
R G L+D+ + + E S V W +++ A +G E + EQ+
Sbjct: 413 GRSGRLEDAYELIKSMPMEPSSGV-WGALLGACRVYGNVELGKEVAEQL 460
>gi|414588833|tpg|DAA39404.1| TPA: hypothetical protein ZEAMMB73_882385 [Zea mays]
Length = 668
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 178/448 (39%), Positives = 279/448 (62%), Gaps = 19/448 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGS--LVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLD 58
G + +++ Y K G L K+ +M R+V++W T+IA AQNGL+ + L
Sbjct: 222 GLDGQTGVANTIIDAYAKGGGHDLGAARKLFDMMD-RDVVSWNTMIALYAQNGLSTEALG 280
Query: 59 QYNLMRMVG--FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISM 116
Y+ M +VG R + +T +V+ +C+ + G++IH +VV+ G +V V +S++ M
Sbjct: 281 LYSKMLIVGGDVRCNAVTLSAVLLACAHAGAIQTGKRIHNQVVRMGLEDNVYVGTSVVDM 340
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
YS+CG ++ + K F + + +++ WS+MIA YG HG G+EA+++F M + + N +TF
Sbjct: 341 YSKCGKVEMAWKAFQKIKGKNILSWSAMIAGYGMHGYGQEALHVFTDMRKSGLKPNYITF 400
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
+++L ACSH GL +G +++ M ++ +P +EHY C+VDLLGR G LDEA LI+ M
Sbjct: 401 ITVLAACSHAGLLSEGRYWYNTMKTEFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMK 460
Query: 237 VKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSE 296
VK +A +W LLSAC+ +K+ ++A AE + ++ ++ YVLLSNI+A A W+ V
Sbjct: 461 VKPDAALWGALLSACRIYKNVELAKICAERLFELDATNSGYYVLLSNIYAEAGMWKEVER 520
Query: 297 FREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPD 356
R ++ R ++K PG S +E+K + H F +GDKSHP+ EI YLE+L + GYVP+
Sbjct: 521 MRVLVKTRGIEKPPGYSSVELKGKTHLFYVGDKSHPQYKEIYAYLEKLLERIHDAGYVPN 580
Query: 357 TGADMHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISE 402
TG+ +HD+D EE+E L+ HSEKLA+AFA +G ++ + K I++
Sbjct: 581 TGSVLHDLDVEERESMLRIHSEKLAVAFALMNSVQGSVIHVIKNLRVCTDCHAAIKIITK 640
Query: 403 IKNREIIVRDASRFHHFRNGKCSCGDYW 430
+ REII+RD RFHHF++G CSCGDYW
Sbjct: 641 LTGREIIIRDLKRFHHFKDGLCSCGDYW 668
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 177/445 (39%), Positives = 276/445 (62%), Gaps = 15/445 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ + G++L Y K G + +KV M ++ I+W ++IA AQ+GL+ + L+ +
Sbjct: 2154 GFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVF 2213
Query: 61 N-LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ ++R VG R + +T +V+ +C+ L G+ IH +V+K +V V +S+I MY +
Sbjct: 2214 HGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCK 2273
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG ++ + KTF + +V W++M+A YG HG+ +EA+++F +M + + N +TFVS+
Sbjct: 2274 CGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSV 2333
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L ACSH GL E+G +F+ M KY +P +EHY C+VDL GR G L+EA LI+ M +K
Sbjct: 2334 LAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKP 2393
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
+ ++W +LL AC+ HK+ D+ A+++ ++P + YVLLSN++A A RW V R
Sbjct: 2394 DFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRM 2453
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M+ R + K PG S +E+K +VH F +GDK HP I YLE+LT E++ GYVP+ +
Sbjct: 2454 LMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGYVPNMTS 2513
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKN 405
+HD+D EEKE L+ HSEKLA+AF G + + K IS++ +
Sbjct: 2514 VLHDVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNLRVCGDCHTVIKLISKLVH 2573
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
R+ +VRD+ RFHHF++G CSCGDYW
Sbjct: 2574 RDFVVRDSKRFHHFKDGVCSCGDYW 2598
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 135/255 (52%), Gaps = 11/255 (4%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
++V+ +++ + G L E ++ +P +NV++W +I G +N E+ L+ + M+
Sbjct: 190 NVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQ 249
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
P++ T VS+I +C+E+ L G+ IH +K + V + ++LI MYS+CG +
Sbjct: 250 AENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIK 309
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D+++ F + W+SMI + G HG G+EA+NLF +ME+ + + +TF+ +L AC
Sbjct: 310 DAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACV 369
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEA------AALIRNMP-- 236
H ++G +F M + Y P EHY C+ +L R LDEA + N P
Sbjct: 370 HIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKEVGSLANSPSI 429
Query: 237 ---VKANAIIWKTLL 248
+A + W LL
Sbjct: 430 CFDARAKQVAWTQLL 444
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 136/288 (47%), Gaps = 21/288 (7%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAE------ 54
GFE DL S+L MY K G L + + +P+RNV++W ++I G QN A+
Sbjct: 2045 GFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLF 2104
Query: 55 -DVLDQYNLMRMVGFRP-DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISS 112
D L++ + P D + VSV+S+CS ++ G + +H VVK G +GV ++
Sbjct: 2105 KDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNT 2164
Query: 113 LISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM-EQKEFEA 171
L+ Y++CG S K F E D + W+SMIA Y G EA+ +F M
Sbjct: 2165 LMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRY 2224
Query: 172 NDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV----VDLLGRCGYLDE 227
N VT ++L AC+H G G D ++K LE+ CV +D+ +CG ++
Sbjct: 2225 NAVTLSAVLLACAHAGALRAGKCIHDQVIKM-----DLEYNVCVGTSIIDMYCKCGRVEM 2279
Query: 228 AAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQ 273
A M K N W +++ H A I +++ GV P
Sbjct: 2280 AKKTFDRMKEK-NVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPN 2326
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 138/315 (43%), Gaps = 42/315 (13%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRN--VIAWITLIAGKAQNGLAEDVLD 58
G D + L H+Y G + ++ I+N W +I NGL+E L
Sbjct: 54 GLSNDQLLTRKLIHLYSTHGRIAYA--ILLFYQIQNPCTFTWNLIIRANTINGLSEQALM 111
Query: 59 QYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
Y M G DK TF VI +C+ ++ G+ +H ++K G S DV V ++LI Y
Sbjct: 112 LYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYF 171
Query: 119 RCG-----------------------------C--LDDSVKTFLECEYSDVVLWSSMIAA 147
+CG C L ++ + F E +VV W++MI
Sbjct: 172 KCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMING 231
Query: 148 YGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKP 207
Y + + EEA+ LF++M+ + N+ T VSL+ AC+ G+ G D +K
Sbjct: 232 YIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNC---I 288
Query: 208 RLEHY--TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAE 265
+ Y T ++D+ +CG + +A + MP K+ W +++++ H A +
Sbjct: 289 EIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKS-LPTWNSMITSLGVHGLGQEALNLFS 347
Query: 266 EILGVNPQ-DAAPYV 279
E+ VN + DA ++
Sbjct: 348 EMERVNVKPDAITFI 362
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 83/157 (52%), Gaps = 8/157 (5%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
NV +W ++IA A+ G + + L ++ +R +G P + +F I SCS L L G+ H
Sbjct: 1979 NVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSH 2038
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGE 155
+ G D+ V S+LI MYS+CG L D+ F E +VV W+SMI Y + + +
Sbjct: 2039 QQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQAD 2098
Query: 156 EAINLFEQMEQKEFEAND--------VTFVSLLYACS 184
A+ LF+ ++E E D V VS+L ACS
Sbjct: 2099 NALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACS 2135
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 67/131 (51%), Gaps = 1/131 (0%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E+ + G++L MY K GS+ + +V MP +++ W ++I +GL ++ L+ ++
Sbjct: 289 EIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSE 348
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVK-AGASLDVGVISSLISMYSRCG 121
M V +PD ITF+ V+ +C + + +G + + G + + +Y+R
Sbjct: 349 MERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSN 408
Query: 122 CLDDSVKTFLE 132
LD++ K+ E
Sbjct: 409 NLDEAFKSTKE 419
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 91/194 (46%), Gaps = 5/194 (2%)
Query: 78 VISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSD 137
++ +C L +QIHA+++++G S D + LI +YS G + ++ F + +
Sbjct: 33 LLQNCKNFKHL---RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPC 89
Query: 138 VVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFD 197
W+ +I A +G E+A+ L++ M + A+ TF ++ AC++ + G
Sbjct: 90 TFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHG 149
Query: 198 LMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKST 257
++ KY + ++D +CG+ A + M V+ N + W T++S +
Sbjct: 150 SLI-KYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVR-NVVSWTTVISGLISCGDL 207
Query: 258 DMAGRIAEEILGVN 271
A RI +EI N
Sbjct: 208 QEARRIFDEIPSKN 221
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 61/134 (45%), Gaps = 4/134 (2%)
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH-CGLKEKGME 194
S+V W+S+IA G EA+ F + + +F + +CS C L M
Sbjct: 1978 SNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMS 2037
Query: 195 FFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
V + + L + ++D+ +CG L +A AL +P++ N + W ++++ +
Sbjct: 2038 HQQAFVFGF--ETDLFVSSALIDMYSKCGQLKDARALFDEIPLR-NVVSWTSMITGYVQN 2094
Query: 255 KSTDMAGRIAEEIL 268
+ D A + ++ L
Sbjct: 2095 EQADNALLLFKDFL 2108
>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Vitis vinifera]
Length = 694
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 168/435 (38%), Positives = 271/435 (62%), Gaps = 14/435 (3%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+SL +MY K G L ++ MP+R++++W +++ NG AE +D +NLM+ G
Sbjct: 260 NSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGIN 319
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
PD+ T V+++ +C++ Q + IHA + + G + D+ + ++L+++Y++ G L+ S
Sbjct: 320 PDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDI 379
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F E + D + W++M+A Y H G EAI LF+ M ++ E + VTF LL ACSH GL
Sbjct: 380 FEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLV 439
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
E+G ++F++M + YR +PRL+HY+C+VDLLGR G L++A LI++MP++ ++ +W LL
Sbjct: 440 EEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLG 499
Query: 250 ACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKE 309
AC+ + + ++ +AE++L ++P D Y++LSNI+++A W+ S+ R M+ER + +
Sbjct: 500 ACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTRN 559
Query: 310 PGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEK 369
PG S++E N++H+F +GD+ HPRS EI LEEL +++ G P T +HD+D E K
Sbjct: 560 PGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIREAGCAPKTEFVLHDIDEEVK 619
Query: 370 EYNLKHHSEKLAIAFAEHTRGLIVMLPF--------------KYISEIKNREIIVRDASR 415
+ HSEKLAIAF G V L K+ S ++ R II+RD+ R
Sbjct: 620 VDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSKR 679
Query: 416 FHHFRNGKCSCGDYW 430
FHHF +G CSC DYW
Sbjct: 680 FHHFADGLCSCRDYW 694
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 131/251 (52%), Gaps = 3/251 (1%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D G L MY K G + +++ MP +++++W +L++G + G L+ + MR
Sbjct: 153 DGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMR 212
Query: 65 M-VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
G +P+++T +SV+S+C+++ L +G+ +H VVK G S V++SLI+MY + G L
Sbjct: 213 TESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFL 272
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
D + + F E +V W+SM+ + +G E+ ++LF M++ + T V+LL AC
Sbjct: 273 DAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRAC 332
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
+ GL + E + + + T +++L + G L+ + + + + + I
Sbjct: 333 TDTGLGRQA-ESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDR-DRIA 390
Query: 244 WKTLLSACKTH 254
W +L+ H
Sbjct: 391 WTAMLAGYAVH 401
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 103/212 (48%), Gaps = 10/212 (4%)
Query: 74 TFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLEC 133
+ V ISSC+ ++ IHA V+K+ D + L+SMY + G +D+ + F E
Sbjct: 124 SLVFAISSCTSVSYC---SAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEM 180
Query: 134 EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE-FEANDVTFVSLLYACSHCGLKEKG 192
D+V W+S+++ G +N F +M + + N+VT +S++ AC+ G ++G
Sbjct: 181 PNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEG 240
Query: 193 MEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACK 252
++V K + + ++++ G+ G+LD A+ L MPV++ + W +++
Sbjct: 241 KSLHGVVV-KLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRS-LVSWNSMV-VIH 297
Query: 253 THKSTDMAGRIAEEIL---GVNPQDAAPYVLL 281
H G ++ G+NP A LL
Sbjct: 298 NHNGYAEKGMDLFNLMKRAGINPDQATMVALL 329
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 84/169 (49%), Gaps = 8/169 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D++ ++L ++Y K G L E + + R+ IAW ++AG A + + + +
Sbjct: 352 GFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLF 411
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQ---QIHAEVVKAGASLDVGVISSLISMY 117
+LM G D +TF ++S+CS + +G+ +I +EV + LD S ++ +
Sbjct: 412 DLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLD--HYSCMVDLL 469
Query: 118 SRCGCLDDSVKTF--LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM 164
R G L+D+ + + E S V W +++ A +G E + EQ+
Sbjct: 470 GRSGRLEDAYELIKSMPMEPSSGV-WGALLGACRVYGNVELGKEVAEQL 517
>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 790
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 169/446 (37%), Positives = 275/446 (61%), Gaps = 25/446 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
DLV+ ++L Y+ SG + E + + + M +N+++W+ +I+G A+NG E+ L ++ M+
Sbjct: 350 DLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMK 409
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
GF P F I SC+ L GQQ HA++VK G + ++LI+MY++CG ++
Sbjct: 410 REGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVE 469
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
++ + F D V W+++IAA G HG G EA++++E+M +K + +TF+++L ACS
Sbjct: 470 EAQQVFRTMPCLDSVSWNALIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACS 529
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL ++G ++F+ M YR P +HY ++DLL R G EA ++I ++P K A IW
Sbjct: 530 HAGLVDQGRKYFNSMETVYRIPPGADHYARLIDLLCRSGKFSEAESIIESLPFKPTAEIW 589
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
+ LLS C+ H + ++ A+++ G+ P+ Y+LLSN++A+ +W+ V+ R+ MR+R
Sbjct: 590 EALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMYAATGQWEEVARVRKLMRDR 649
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
VKKE SW+E++ QVH F + D SHP + + YL++L EM+ GYVPDT +HD+
Sbjct: 650 GVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYKYLQDLGKEMRRLGYVPDTSFVLHDV 709
Query: 365 DSE-EKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIK 404
+S+ KE L HSEK+A+AF GL+ + P F+++S++
Sbjct: 710 ESDGHKEDMLTTHSEKIAVAF-----GLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSKVV 764
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
R+II+RD RFHHFRNG+CSCG++W
Sbjct: 765 QRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 133/291 (45%), Gaps = 37/291 (12%)
Query: 16 YMKSGSLVEGEKVIRLMPIR-NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKIT 74
Y+K+G G+++++ M ++A+ +I+G GL ++ L+ M G D+ T
Sbjct: 229 YVKNGCFDLGKELLKGMDENMKLVAYNAMISGYVNCGLYQEALEMVRRMVSSGIELDEFT 288
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
+ SVI +C+ L G+Q+HA V++ +SL+++Y +CG +++ F +
Sbjct: 289 YPSVIRACANARLLQLGKQVHAYVLRR-EDFSFHFDNSLVTLYYKCGKFNEARAIFEKMP 347
Query: 135 YSDVVLWSSMIAAY-------------------------------GFHGKGEEAINLFEQ 163
D+V W+++++ Y +G GEE + LF
Sbjct: 348 AKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSC 407
Query: 164 MEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCG 223
M+++ FE D F + +C+ G G +F +V K L ++ + +CG
Sbjct: 408 MKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLV-KIGFDSSLSAGNALITMYAKCG 466
Query: 224 YLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNP 272
++EA + R MP +++ W L++A H A + EE+L G+ P
Sbjct: 467 VVEEAQQVFRTMPC-LDSVSWNALIAALGQHGHGVEAVDVYEEMLKKGIRP 516
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 127/288 (44%), Gaps = 44/288 (15%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPI--RNVIAWITLIAGKAQNGLAEDVLDQY 60
E D +A +++ Y SG + V P+ R+ + + +I G + N ++ +
Sbjct: 77 EPDKIARTTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLF 136
Query: 61 NLMRMVGFRPDKITFVSVISSCSELAT-LGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
M+ GF+PD T+ SV++ + + Q Q HA +K+GA V ++L+S+YSR
Sbjct: 137 CKMKHEGFKPDDFTYASVLAGLALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSR 196
Query: 120 CGC----LDDSVKTFLECEYSDVVLWSSMIAAYGFHG---------KG------------ 154
C L + K F + D W++M+ Y +G KG
Sbjct: 197 CASSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNA 256
Query: 155 -----------EEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKY 203
+EA+ + +M E ++ T+ S++ AC++ L + G + ++
Sbjct: 257 MISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVL--- 313
Query: 204 RRKPRLEHY-TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
RR+ H+ +V L +CG +EA A+ MP K + + W LLS
Sbjct: 314 RREDFSFHFDNSLVTLYYKCGKFNEARAIFEKMPAK-DLVSWNALLSG 360
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 80/164 (48%), Gaps = 10/164 (6%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ L AG++L MY K G + E ++V R MP + ++W LIA Q+G + +D Y
Sbjct: 447 GFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHGHGVEAVDVY 506
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEV-----VKAGASLDVGVISSLIS 115
M G RPD+ITF++V+++CS + QG++ + + GA + LI
Sbjct: 507 EEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYRIPPGADH----YARLID 562
Query: 116 MYSRCGCLDDSVKTFLECEYSDVV-LWSSMIAAYGFHGKGEEAI 158
+ R G ++ + +W ++++ HG E I
Sbjct: 563 LLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHGNMELGI 606
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 173/449 (38%), Positives = 274/449 (61%), Gaps = 29/449 (6%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM- 63
D++AG+++ MY K ++ +++ MP+++ ++W TLI G QNGLA + +++Y M
Sbjct: 305 DIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQ 364
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
+ G + + TFVSV+ + S L L QG ++HA +K G ++DV V + LI +Y++CG L
Sbjct: 365 KHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKL 424
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
+++ F + W+++I+ G HG G EA+ LF +M+Q+ + + VTFVSLL AC
Sbjct: 425 AEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAAC 484
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
SH GL ++G FFD+M Y P +HY C+ D+LGR G LDEA I+NMP+K ++ +
Sbjct: 485 SHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGRAGQLDEAFNFIQNMPIKPDSAV 544
Query: 244 WKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
W LL AC+ H + +M ++ + ++P++ YVL+SN++A +W GV E R +R
Sbjct: 545 WGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKVGKWDGVDEVRSLVRR 604
Query: 304 RNVKKEPGVSWLEIKNQVHQFTMGDKS--HPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
+N++K PG S +E+K V+ F G+++ HP+ EI L L ++++ GYV D +
Sbjct: 605 QNLQKTPGWSSIEVKRSVNVFYSGNQTEPHPQHEEIQAELRSLLAKIRSVGYVSDYSFVL 664
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP--------------------FKYIS 401
D++ +EKE+ L +HSE+LAIAF I+ P KYIS
Sbjct: 665 QDVEDDEKEHILNNHSERLAIAFG------IINTPSRTPLHIYKNLRVCGDCHNATKYIS 718
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+I REIIVRD++RFHHF++G CSCGD+W
Sbjct: 719 QITEREIIVRDSNRFHHFKDGHCSCGDFW 747
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 147/305 (48%), Gaps = 14/305 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + +L ++L +Y K G L E + V M R+++ W ++I+G Q G L +
Sbjct: 199 GLDKELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMF 258
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASL-DVGVISSLISMYSR 119
MR G PD +T VS+ S+ ++ + +H V++ G + D+ ++++ MY++
Sbjct: 259 QGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAK 318
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE-FEANDVTFVS 178
++ + + F D V W+++I Y +G EA+ + M++ E +A TFVS
Sbjct: 319 LSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVS 378
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY--TCVVDLLGRCGYLDEAAALIRNMP 236
+L A SH G ++GM L +K ++ Y TC++DL +CG L EA L MP
Sbjct: 379 VLPAYSHLGALQQGMRMHALSIKI---GLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMP 435
Query: 237 VKANAIIWKTLLSACKTH----KSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQ 292
++ W ++S H ++ + R+ +E G+ P LL+ + Q
Sbjct: 436 RRSTG-PWNAIISGLGVHGHGAEALTLFSRMQQE--GIKPDHVTFVSLLAACSHAGLVDQ 492
Query: 293 GVSEF 297
G S F
Sbjct: 493 GRSFF 497
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 115/251 (45%), Gaps = 23/251 (9%)
Query: 11 SLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRP 70
SL H Y++ G + E KV M R+V AW +++G +N A + + + M G
Sbjct: 108 SLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAG 167
Query: 71 DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTF 130
D +T SV+ C L +H VK G ++ V ++LI +Y + G L+++ F
Sbjct: 168 DTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVF 227
Query: 131 LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS------ 184
E D+V W+S+I+ G+ A+ +F+ M + +T VSL A +
Sbjct: 228 HGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGR 287
Query: 185 -----HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
HC + +G + D++ +VD+ + ++ A + +MPV+
Sbjct: 288 SAKSLHCYVMRRGWDVDDIIAG-----------NAIVDMYAKLSNIEAAQRMFDSMPVQ- 335
Query: 240 NAIIWKTLLSA 250
+++ W TL++
Sbjct: 336 DSVSWNTLITG 346
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 12/210 (5%)
Query: 68 FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAG-ASLDVGVISSLISMYSRCGCLDDS 126
FRPD TF S+I + A+ Q+HA ++ G V SL+ Y R G + ++
Sbjct: 66 FRPDGFTFPSLIRAAPSNAS---AAQLHACALRLGLVRPSVFTSGSLVHAYLRFGRISEA 122
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHC 186
K F E DV W++M++ + + EA+ LF +M + + VT S+L C
Sbjct: 123 YKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLL 182
Query: 187 GLKEKGMEFFDLMVKKYRRKPRLEHYTC--VVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
G + + VK K E + C ++D+ G+ G L+EA + M + + + W
Sbjct: 183 GDQVLALVMHVYAVKHGLDK---ELFVCNALIDVYGKLGMLEEAQCVFHGMECR-DLVTW 238
Query: 245 KTLLSACKTHKSTDMAGRIAEEIL--GVNP 272
+++S C+ T A ++ + + GV+P
Sbjct: 239 NSIISGCEQRGQTAAALKMFQGMRGSGVSP 268
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 12/171 (7%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +D+ G+ L +Y K G L E + MP R+ W +I+G +G + L +
Sbjct: 403 GLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLF 462
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISS----LISM 116
+ M+ G +PD +TFVS++++CS + QG+ +V++ + D+ I+ + M
Sbjct: 463 SRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFF-DVMQ--VTYDIVPIAKHYACMADM 519
Query: 117 YSRCGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGE----EAINLFE 162
R G LD++ D +W +++ A HG E + NLFE
Sbjct: 520 LGRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFE 570
>gi|125558027|gb|EAZ03563.1| hypothetical protein OsI_25699 [Oryza sativa Indica Group]
Length = 528
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 177/448 (39%), Positives = 281/448 (62%), Gaps = 19/448 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGS--LVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLD 58
GFE + +++ Y K GS L KV M R+V++W ++IA AQNG++ + +
Sbjct: 82 GFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTME-RDVVSWNSMIALYAQNGMSAEAIG 140
Query: 59 QYNLMRMVG--FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISM 116
Y+ M VG + + + +V+ +C+ + G+ IH +VV+ G +V V +S++ M
Sbjct: 141 LYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKHIHNQVVRMGLEENVYVGTSIVDM 200
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
YS+CG ++ + + F + + +++ WS+MI YG HG+G+EA+ +F +M++ N +TF
Sbjct: 201 YSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITF 260
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
+S+L ACSH GL ++G +++ M +++ + +EHY C+VDLLGR G LDEA +LI+ M
Sbjct: 261 ISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMK 320
Query: 237 VKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSE 296
VK +A IW LLSAC+ HK+ ++A + + ++ ++ YVLLSNI+A A W+ V
Sbjct: 321 VKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAEAGMWKDVER 380
Query: 297 FREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPD 356
R ++ R ++K PG S E+K +++ F +GDKSHP+ +EI YLE+L M+ GYVP+
Sbjct: 381 IRLLVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKLLERMQEAGYVPN 440
Query: 357 TGADMHDMDSEEKEYNLKHHSEKLAIAFA---EHTRGLIVML-----------PFKYISE 402
TG+ +HD+D EEKE L+ HSEKLA+AFA R +I ++ K+I++
Sbjct: 441 TGSVLHDLDEEEKESALRIHSEKLAVAFALMNSVPRSVIHIIKNLRVCSDCHTAMKFITK 500
Query: 403 IKNREIIVRDASRFHHFRNGKCSCGDYW 430
I REII+RD RFHHF++G CSC DYW
Sbjct: 501 ITEREIIIRDLQRFHHFKDGLCSCRDYW 528
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 111/249 (44%), Gaps = 9/249 (3%)
Query: 32 MPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRP--DKITFVSVISSCSELATLG 89
+P N + + +G +N L L+ + M D+ + S+ + + G
Sbjct: 10 IPDPNPVIVTAMASGYVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFSASARVPDRG 69
Query: 90 QGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV-KTFLECEYSDVVLWSSMIAAY 148
+HA + K G + GV+++++ Y++ G D V + + DVV W+SMIA Y
Sbjct: 70 VTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTMERDVVSWNSMIALY 129
Query: 149 GFHGKGEEAINLFEQMEQ--KEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRK 206
+G EAI L+ +M + N V ++L AC+H G + G + +V + +
Sbjct: 130 AQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKHIHNQVV-RMGLE 188
Query: 207 PRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEE 266
+ T +VD+ +CG ++ A+ R + K N + W +++ H A I E
Sbjct: 189 ENVYVGTSIVDMYSKCGRVEMASRAFRKIKEK-NILSWSAMITGYGMHGRGQEALEIFTE 247
Query: 267 I--LGVNPQ 273
+ G+ P
Sbjct: 248 MKRSGLRPN 256
>gi|449445401|ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Cucumis sativus]
Length = 697
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 174/442 (39%), Positives = 267/442 (60%), Gaps = 14/442 (3%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
+ D+ GSS+ MY K G+++ G + RNV++W ++IA QN E+ L+ ++
Sbjct: 256 DCDVYIGSSIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTSIIAAYFQNEFFEEALNLFSK 315
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M + P++ T + +S + L+ L G Q+HA K+G +V V ++LI MY + G
Sbjct: 316 MEIDCIPPNEYTMAVLFNSAAGLSALCLGDQLHARAEKSGLKGNVMVGNALIIMYFKSGD 375
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
+ + F +++ W+++I + HG G+EA+++F+ M N VTF+ ++ A
Sbjct: 376 ILAAQSVFSNMTCCNIITWNAIITGHSHHGLGKEALSMFQDMMATGERPNYVTFIGVILA 435
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
C+H L ++G +F+ ++K++R P LEHYTC+V LL R G LDEA +R+ + + +
Sbjct: 436 CAHLKLVDEGFYYFNHLMKQFRIVPGLEHYTCIVGLLSRSGRLDEAENFMRSHQINWDVV 495
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMR 302
W+TLL+AC HK D +IAE +L + P+D Y+LLSN+HA +RW V E R+ MR
Sbjct: 496 SWRTLLNACYVHKHYDKGRKIAEYLLQLEPRDVGTYILLSNMHARVRRWDHVVEIRKLMR 555
Query: 303 ERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMH 362
ERNVKKEPGVSWLEI+N H FT D HP + I +++L S+++ GYVPD +H
Sbjct: 556 ERNVKKEPGVSWLEIRNVAHVFTSEDIKHPEANLIYENVKDLLSKIRPLGYVPDIDNVLH 615
Query: 363 DMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNREI 408
D++ E+K NL +HSEKLA+A+ + G + + K IS++ NR I
Sbjct: 616 DIEDEQKVDNLSYHSEKLAVAYGLMKTPSGAPITVIKNLRMCDDCHTAIKLISKVANRVI 675
Query: 409 IVRDASRFHHFRNGKCSCGDYW 430
+VRDA+RFHHF+NG CSCGDYW
Sbjct: 676 VVRDANRFHHFQNGCCSCGDYW 697
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 90/180 (50%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E ++L +Y K + +++ +P ++ + ++ G Q+ + +D
Sbjct: 153 GLEFHQYVKNALIQLYSKCSDVGAAIQILYTVPGNDIFCYNLVVNGLLQHTHMAEAVDVL 212
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
L+ G + T+V++ C+ L + G+Q+HA+++K+ DV + SS+I MY +C
Sbjct: 213 KLIISEGIEWNNATYVTIFRLCASLKDITLGKQVHAQMLKSDIDCDVYIGSSIIDMYGKC 272
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + F + +VV W+S+IAAY + EEA+NLF +ME N+ T L
Sbjct: 273 GNVLSGRTFFDRLQSRNVVSWTSIIAAYFQNEFFEEALNLFSKMEIDCIPPNEYTMAVLF 332
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 117/244 (47%), Gaps = 8/244 (3%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV-GF 68
+SL ++Y+K + K+ MP RNV++W L+AG QNG +V + + M +
Sbjct: 61 NSLINLYVKCDEVSIARKLFDSMPRRNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNI 120
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
P++ + ISSC + +G+Q H +K+G V ++LI +YS+C + +++
Sbjct: 121 FPNEYVIATAISSCDSQMYV-EGKQCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQ 179
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
+D+ ++ ++ H EA+++ + + + E N+ T+V++ C+
Sbjct: 180 ILYTVPGNDIFCYNLVVNGLLQHTHMAEAVDVLKLIISEGIEWNNATYVTIFRLCASLKD 239
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHY--TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKT 246
G + M+K + Y + ++D+ G+CG + + + N + W +
Sbjct: 240 ITLGKQVHAQMLKS---DIDCDVYIGSSIIDMYGKCGNVLSGRTFFDRLQSR-NVVSWTS 295
Query: 247 LLSA 250
+++A
Sbjct: 296 IIAA 299
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 88/174 (50%), Gaps = 7/174 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + +++ G++L MY KSG ++ + V M N+I W +I G + +GL ++ L +
Sbjct: 355 GLKGNVMVGNALIIMYFKSGDILAAQSVFSNMTCCNIITWNAIITGHSHHGLGKEALSMF 414
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLD-VGVISSLISMYSR 119
M G RP+ +TF+ VI +C+ L + +G ++K + + + ++ + SR
Sbjct: 415 QDMMATGERPNYVTFIGVILACAHLKLVDEGFYYFNHLMKQFRIVPGLEHYTCIVGLLSR 474
Query: 120 CGCLDDSVKTFLECEYS--DVVLWSSMIAAYGFH---GKGEEAINLFEQMEQKE 168
G LD++ + F+ DVV W +++ A H KG + Q+E ++
Sbjct: 475 SGRLDEA-ENFMRSHQINWDVVSWRTLLNACYVHKHYDKGRKIAEYLLQLEPRD 527
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASL---DVGVISSLISMYSRCGCLDDSVKTFLE 132
+ ++ ++ L G+ IHA + + V ++SLI++Y +C + + K F
Sbjct: 23 IKLLKVAADAKNLKFGRTIHAHLTITNHNYRDSKVNQLNSLINLYVKCDEVSIARKLFDS 82
Query: 133 CEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE 168
+VV WS+++A Y +G E LF++M K+
Sbjct: 83 MPRRNVVSWSALMAGYMQNGNPLEVFELFKKMVVKD 118
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 176/435 (40%), Positives = 261/435 (60%), Gaps = 14/435 (3%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+SL MY +V+ ++ + ++ ++W ++I G A+NG A + L + M + G
Sbjct: 302 NSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSG 361
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
PD++TF++V+ +C ++A L G IH+ +VK G + V ++L+ MYS+CG L S +
Sbjct: 362 PDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRV 421
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F E +V WS+M+A YG HG+G EAI++ + M+ ++ F S+L ACSH GL
Sbjct: 422 FDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLV 481
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
+G E F M K+Y KP L HY+C+VDLLGR G+LDEA +IR M +K + IW LL+
Sbjct: 482 VEGKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAALLT 541
Query: 250 ACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKE 309
A + HK+ +A A+++ +NP+ + Y+ LSNI+A+ KRW V R +R + +KK
Sbjct: 542 ASRLHKNIKLAEISAQKVFDMNPKVVSSYICLSNIYAAEKRWDDVERVRAMVRRKGLKKS 601
Query: 310 PGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEK 369
PG S++E+ N VH+F +GDKSH ++ +I L EL ++K GY PDT +D++ E K
Sbjct: 602 PGCSFIELDNMVHRFLVGDKSHQQTEDIYAKLNELKQQLKEAGYKPDTSLVFYDVEEEVK 661
Query: 370 EYNLKHHSEKLAIAFAEHTRGLIVMLPF--------------KYISEIKNREIIVRDASR 415
E L HSE+LAIAFA G ++ K ISE+ REII+RD R
Sbjct: 662 EKMLWDHSERLAIAFALINTGPGTVIRITKNLRVCGDCHTVTKLISELTGREIIMRDIHR 721
Query: 416 FHHFRNGKCSCGDYW 430
FHHF G CSCGDYW
Sbjct: 722 FHHFIKGFCSCGDYW 736
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 148/320 (46%), Gaps = 15/320 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E D+ G+SL MY K G + V M R++ +W T+I+G A+N + +
Sbjct: 191 GLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVF 250
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAG-ASLDVGVISSLISMYSR 119
+LM G D T + ++S+C++L + +G+ IH V+ + + +SLI MY
Sbjct: 251 DLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCN 310
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
C C+ D+ + F + D V W+SMI Y +G E++ LF +M + VTF+++
Sbjct: 311 CNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAV 370
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L AC GM +VKK + T +VD+ +CG L + + MP K+
Sbjct: 371 LGACDQIAALRYGMSIHSYLVKKGFDANTIVG-TALVDMYSKCGSLACSRRVFDEMPDKS 429
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEIL------GVNPQDAAPYVLLSNIHASAKRWQG 293
+ W +++ H GR A IL V P + +LS + +G
Sbjct: 430 -LVSWSAMVAGYGLHGR----GREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEG 484
Query: 294 VSEFREAMRERNVKKEPGVS 313
F + +E NVK P +S
Sbjct: 485 KEIFYKMEKEYNVK--PALS 502
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 87/175 (49%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+ LA Y G + + E + + ++N W +I G A NGL L Y M G R
Sbjct: 99 TKLAAFYAGCGLMSQAEVIFDGIVLKNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQR 158
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
D T+ V+ +C +L + G+++H+EVV G D+ V +SL++MY++ G + +
Sbjct: 159 ADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMV 218
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
F D+ W++MI+ Y + A +F+ M + A+ T + LL AC+
Sbjct: 219 FDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACA 273
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 88/176 (50%), Gaps = 10/176 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ + + G++L MY K GSL +V MP +++++W ++AG +G + +
Sbjct: 394 GFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISIL 453
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSR 119
+ M+ PD F S++S+CS + +G++I ++ K + S ++ + R
Sbjct: 454 DGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKMEKEYNVKPALSHYSCMVDLLGR 513
Query: 120 CGCLDDS---VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEAN 172
G LD++ ++T SD+ W++++ A H + I L E QK F+ N
Sbjct: 514 AGHLDEAYVIIRTMEIKPTSDI--WAALLTASRLH----KNIKLAEISAQKVFDMN 563
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
Query: 77 SVISSCSELATLGQGQQIHAEVVKAGASLDVGVISS-LISMYSRCGCLDDSVKTFLECEY 135
+++ S + + QGQQ+HA ++ + +++ L + Y+ CG + + F
Sbjct: 64 ALLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVL 123
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKG 192
+ LW+ MI Y +G +++ L+ +M A++ T+ +L AC L E G
Sbjct: 124 KNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIG 180
>gi|449434342|ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 599
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 176/445 (39%), Positives = 267/445 (60%), Gaps = 15/445 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ D+ ++L +Y K+ + +KV MP R +IAW +LI+G QNGL ++ + +
Sbjct: 155 GYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLF 214
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+LM GF+PD T VS++SSCS+L L G +H G L+V + +SLI+MY+RC
Sbjct: 215 HLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRC 274
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + + F + +VV W++MI+ YG HG G +A+ LF +M N++TFV++L
Sbjct: 275 GNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVL 334
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRN-MPVKA 239
AC+H GL + G F M + Y P +EH C+VD+ GR G L++A I+ +P +
Sbjct: 335 SACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEP 394
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
+W ++L AC+ H++ D+ ++AE +L V P++ YV+LSNI+A A R V R
Sbjct: 395 GPAVWTSMLGACRMHRNFDLGVKVAEHVLSVEPENPGHYVMLSNIYALAGRMDRVEMVRN 454
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M R +KK+ G S +EI + + F+MGDKSHP++ I YL+EL GYVP +
Sbjct: 455 MMTRRRLKKQVGYSTIEINRKTYLFSMGDKSHPQTNTIYRYLDELMCRCSESGYVPAPES 514
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKN 405
MHD++ EE++Y L++HSEKLA+AF + +G + + K+IS I +
Sbjct: 515 LMHDLEEEERDYALRYHSEKLALAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISIIAD 574
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
REIIVRD RFHHF++G CSC DYW
Sbjct: 575 REIIVRDKFRFHHFKDGSCSCLDYW 599
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 127/272 (46%), Gaps = 18/272 (6%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+ L + +GS+ ++ +P + + +L+ ++ G + D + Y M G
Sbjct: 63 TKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAP 122
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
TF SVI +C++L+ L G++IH+ V+ G D+ V ++LI++Y++ + + K
Sbjct: 123 QSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKV 182
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F ++ W+S+I+ Y +G +E+I LF M + F+ + T VSLL +CS G
Sbjct: 183 FDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGAL 242
Query: 190 EKGMEF--------FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
+ G FDL V T ++++ RCG + +A + +M + N
Sbjct: 243 DFGCWLHDYADGNGFDLNVVL---------GTSLINMYTRCGNVSKAREVFDSMKER-NV 292
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQ 273
+ W ++S H A + E+ P+
Sbjct: 293 VTWTAMISGYGMHGYGRQAMELFTEMRAYGPR 324
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 67/160 (41%), Gaps = 4/160 (2%)
Query: 92 QQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFH 151
QQ+HA ++ +G +++ LIS+ G + + + F D L+ S++
Sbjct: 44 QQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKF 103
Query: 152 GKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFD-LMVKKYRRKPRLE 210
G + + + +M ++ TF S++ AC+ G E +MV Y ++
Sbjct: 104 GFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQ 163
Query: 211 HYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
++ L + + A + MP + I W +L+S
Sbjct: 164 --AALIALYAKASDMKVAKKVFDAMPQR-TIIAWNSLISG 200
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 176/450 (39%), Positives = 265/450 (58%), Gaps = 30/450 (6%)
Query: 6 LVAGSSLAHMYMKSGSLVEGEKVIRLMPIR--NVIAWITLIAGKAQNGLAEDVLDQYNLM 63
L+ ++L MY K S + +P R NV+ W +I G AQ G + D L ++ M
Sbjct: 442 LMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEM 501
Query: 64 --RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGA--SLDVGVISSLISMYSR 119
+ P+ T ++ +C+ LA L G+QIHA V + V + LI MYS+
Sbjct: 502 ISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSK 561
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG +D + F + V W+SM++ YG HG+G+EA+++F++M++ F +D++F+ L
Sbjct: 562 CGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVL 621
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
LYACSH G+ ++G+ +FD+M + Y EHY CV+DLL RCG LD+A I+ MP++
Sbjct: 622 LYACSHSGMVDQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEP 681
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
+A+IW LLSAC+ H + ++A +++ + ++ Y L+SNI+A+A+RW+ V+ R+
Sbjct: 682 SAVIWVALLSACRVHSNVELAEYALNKLVNMKAENDGSYTLISNIYANARRWKDVARIRQ 741
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M++ +KK PG SW++ K F +GD+SHP S EI LE L +K+ GYVP+T
Sbjct: 742 LMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETNF 801
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYI 400
+HD+D EEK L HSEKLA+A+ GL+ P F YI
Sbjct: 802 ALHDVDDEEKNNLLSEHSEKLALAY-----GLLTTSPGCPIRITKNLRVCGDCHSAFTYI 856
Query: 401 SEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
S+I + EIIVRD+SRFHHF+NG CSCG YW
Sbjct: 857 SKIVDHEIIVRDSSRFHHFKNGSCSCGGYW 886
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 156/352 (44%), Gaps = 63/352 (17%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKV---IRLMPIRNVIAWITLIAGKAQNGLAEDVL 57
GFE ++ ++L MY + GSL + V I I +VI+W +++A + L
Sbjct: 179 GFESNVFVCNALVAMYSRCGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTAL 238
Query: 58 DQYNLMRMV------GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVIS 111
+ ++ M M+ R D I+ V+++ +C+ L L Q ++IH+ ++ G D V +
Sbjct: 239 ELFSEMSMIVHEKATNERSDIISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCN 298
Query: 112 SLISMYSRCGCLDDSVKTFLECEYSDVV-------------------------------- 139
+LI Y++CG ++D+VK F E+ DVV
Sbjct: 299 ALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPL 358
Query: 140 ---LWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFF 196
WS++IA Y G +EA++ F+QM E N VT +SLL AC+ G +GME
Sbjct: 359 DVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIH 418
Query: 197 DLMVKK-----------YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA-NAIIW 244
+KK L Y ++D+ +C A ++ ++P + N + W
Sbjct: 419 AYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTW 478
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPY------VLLSNIHASAKR 290
++ + ++ A +I E++ P AP +L++ H +A R
Sbjct: 479 TVMIGGYAQYGDSNDALKIFSEMIS-KPYAVAPNAYTISCILMACAHLAALR 529
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 114/252 (45%), Gaps = 15/252 (5%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G+ + Y+ G+ + V+ + + W L+ + G + + M G
Sbjct: 86 GTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAGT 145
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
+PD T + +C EL + G+ +H + G +V V ++L++MYSRCG L+D+
Sbjct: 146 KPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASL 205
Query: 129 TFLECE---YSDVVLWSSMIAAYGFHGKGEEAINLFEQM-----EQKEFEAND-VTFVSL 179
F E DV+ W+S++AA+ A+ LF +M E+ E +D ++ V++
Sbjct: 206 VFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNI 265
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC--VVDLLGRCGYLDEAAALIRNMPV 237
L AC+ + E + R + + C ++D +CG +++A + M
Sbjct: 266 LPACASLKALPQIKEIHSYAI---RNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEF 322
Query: 238 KANAIIWKTLLS 249
K + + W +++
Sbjct: 323 K-DVVSWNAMVT 333
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 180/467 (38%), Positives = 274/467 (58%), Gaps = 37/467 (7%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ D ++L MY + G + E + M +R+ ++W T+I G +G + L
Sbjct: 430 GFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVLL 489
Query: 61 NLMRMV-----------------GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGA 103
+ M+ + ++P+ IT ++V+ C+ LA + +G++IHA ++
Sbjct: 490 HEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNML 549
Query: 104 SLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQ 163
+ D+ V S+L+ MY++CGCL+ S + F E +V+ W+ +I A G HGKGEEA+ LF+
Sbjct: 550 ASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKN 609
Query: 164 MEQK-----EFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDL 218
M + E + N+VTF+++ ACSH GL +G+ F M + +P +HY CVVDL
Sbjct: 610 MVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDL 669
Query: 219 LGRCGYLDEAAALIRNMPVKANAI-IWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAP 277
LGR G L+EA L+ MP + + + W +LL AC+ H++ ++ A+ +L + P A+
Sbjct: 670 LGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASH 729
Query: 278 YVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEI 337
YVLLSNI++SA W E R+ MR+ VKKEPG SW+E +++VH+F GD SHP+S ++
Sbjct: 730 YVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQL 789
Query: 338 DLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML 395
+LE L+ +M+ GYVPDT +H++D +EKE L HSEKLAIAF G + +
Sbjct: 790 HGFLETLSEKMRKEGYVPDTSCVLHNVDEDEKENLLCGHSEKLAIAFGILNTPPGTTIRV 849
Query: 396 ------------PFKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
K+IS+I REIIVRD RFHHF+ G CSCGDYW
Sbjct: 850 AKNLRVCNDCHAATKFISKIMEREIIVRDVRRFHHFKEGTCSCGDYW 896
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 119/264 (45%), Gaps = 20/264 (7%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY-NLMRMVG 67
GS+L MY + G +V + R + W +I+G A+NGL E L + ++++ G
Sbjct: 336 GSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAG 395
Query: 68 FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV 127
P+ T SV+ +C + IH VK G D V ++L+ MYSR G +D S
Sbjct: 396 LLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISE 455
Query: 128 KTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE-----------------FE 170
F E D V W++MI Y G+ A+ L +M++ E ++
Sbjct: 456 TIFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYK 515
Query: 171 ANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAA 230
N +T +++L C+ KG E ++ + + +VD+ +CG L+ +
Sbjct: 516 PNAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASD-ITVGSALVDMYAKCGCLNLSRR 574
Query: 231 LIRNMPVKANAIIWKTLLSACKTH 254
+ MP K N I W L+ AC H
Sbjct: 575 VFNEMPNK-NVITWNVLIMACGMH 597
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 11/224 (4%)
Query: 33 PIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQ 92
P R+ +W+ + + ++ + + Y M + G RPD F +V+ + S L L G+
Sbjct: 53 PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112
Query: 93 QIHAEVVKAG-ASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFH 151
QIHA VK G S V V ++L++MY +CG + D K F D V W+S IAA
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRF 172
Query: 152 GKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKE-----KGMEFFDLMVKKYRRK 206
K E+A+ F M+ + E + T VS+ ACS+ G+ K + + L V +
Sbjct: 173 EKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVGDQKTF 232
Query: 207 PRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
++ + + G +D++ AL + V + + W T++S+
Sbjct: 233 TN----NALMAMYAKLGRVDDSKALFESF-VDRDMVSWNTMISS 271
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 120/243 (49%), Gaps = 4/243 (1%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L MY K G + + + + R++++W T+I+ +Q+ + L + LM + G
Sbjct: 235 NALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVE 294
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVI-SSLISMYSRCGCLDDSVK 128
D +T SV+ +CS L L G++IHA V++ ++ + S+L+ MY C ++ +
Sbjct: 295 LDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRR 354
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLF-EQMEQKEFEANDVTFVSLLYACSHCG 187
F + LW++MI+ Y +G E+A+ LF E ++ N T S++ AC HC
Sbjct: 355 VFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCE 414
Query: 188 LKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTL 247
VK ++ R ++D+ R G +D + + +M V+ + + W T+
Sbjct: 415 AFSNKESIHGYAVKLGFKEDRYVQ-NALMDMYSRMGKMDISETIFDSMEVR-DRVSWNTM 472
Query: 248 LSA 250
++
Sbjct: 473 ITG 475
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 93/188 (49%), Gaps = 14/188 (7%)
Query: 6 LVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRM 65
+ ++L +MY K G + + KV + R+ ++W + IA + E L+ + M+M
Sbjct: 128 VTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQALEAFRAMQM 187
Query: 66 VGFRPDKITFVSVISSCSELAT---LGQGQQIHAEVVKAGASLDVG-----VISSLISMY 117
T VSV +CS L L G+Q+H G SL VG ++L++MY
Sbjct: 188 ENMELSSFTLVSVALACSNLGVMHGLRLGKQLH------GYSLRVGDQKTFTNNALMAMY 241
Query: 118 SRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
++ G +DDS F D+V W++MI+++ + EA+ F M + E + VT
Sbjct: 242 AKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIA 301
Query: 178 SLLYACSH 185
S+L ACSH
Sbjct: 302 SVLPACSH 309
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 345 bits (885), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 181/456 (39%), Positives = 268/456 (58%), Gaps = 26/456 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVL--- 57
G + D ++L MY + G + ++ M R+++ W T+I G + ED L
Sbjct: 348 GLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLL 407
Query: 58 -DQYNLMR-------MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV 109
NL R V +P+ IT ++++ SC+ L+ L +G++IHA +K + DV V
Sbjct: 408 HKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAV 467
Query: 110 ISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEF 169
S+L+ MY++CGCL S K F + +V+ W+ +I AYG HG G+EAI+L M +
Sbjct: 468 GSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGV 527
Query: 170 EANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAA 229
+ N+VTF+S+ ACSH G+ ++G+ F +M Y +P +HY CVVDLLGR G + EA
Sbjct: 528 KPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAY 587
Query: 230 ALIRNMPVKAN-AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASA 288
L+ MP N A W +LL A + H + ++ A+ ++ + P A+ YVLL+NI++SA
Sbjct: 588 QLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSA 647
Query: 289 KRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEM 348
W +E R M+E+ V+KEPG SW+E ++VH+F GD SHP+S ++ YLE L M
Sbjct: 648 GLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERM 707
Query: 349 KLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVM------------ 394
+ GYVPDT +H+++ +EKE L HSEKLAIAF + G I+
Sbjct: 708 RKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCH 767
Query: 395 LPFKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
L K+IS+I +REII+RD RFH F+NG CSCGDYW
Sbjct: 768 LATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 803
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 127/280 (45%), Gaps = 16/280 (5%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY-NLMRMVG 67
GS+L MY ++ G +V M R + W +IAG +QN ++ L + + G
Sbjct: 254 GSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAG 313
Query: 68 FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV 127
+ T V+ +C + + IH VVK G D V ++L+ MYSR G +D ++
Sbjct: 314 LLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAM 373
Query: 128 KTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE-----------FEANDVTF 176
+ F + E D+V W++MI Y F E+A+ L +M+ E + N +T
Sbjct: 374 RIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITL 433
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
+++L +C+ KG E +K + + +VD+ +CG L + + +P
Sbjct: 434 MTILPSCAALSALAKGKEIHAYAIKN-NLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP 492
Query: 237 VKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQD 274
K N I W ++ A H + A + ++ GV P +
Sbjct: 493 QK-NVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNE 531
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 120/251 (47%), Gaps = 6/251 (2%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
EL+ ++L MY K G L + ++ R+++ W T+++ QN + L+
Sbjct: 146 ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLRE 205
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVG--VISSLISMYSRC 120
M + G PD+ T SV+ +CS L L G+++HA +K G SLD V S+L+ MY C
Sbjct: 206 MVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNG-SLDENSFVGSALVDMYCNC 264
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE-FEANDVTFVSL 179
+ + F + LW++MIA Y + +EA+ LF ME+ AN T +
Sbjct: 265 KQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGV 324
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
+ AC G + +VK+ + R T ++D+ R G +D A + M +
Sbjct: 325 VPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNT-LMDMYSRLGKIDIAMRIFGKMEDR- 382
Query: 240 NAIIWKTLLSA 250
+ + W T+++
Sbjct: 383 DLVTWNTMITG 393
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 109/218 (50%), Gaps = 9/218 (4%)
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLD-VGVISSLISMYSRCG 121
M ++G +PD F +++ + ++L + G+QIHA V K G +D V V ++L+++Y +CG
Sbjct: 1 MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG 60
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
K F + V W+S+I++ K E A+ F M + E + T VS++
Sbjct: 61 DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVT 120
Query: 182 ACSHCGLKEKGMEFFDLMVKKY-RRKPRLEHY--TCVVDLLGRCGYLDEAAALIRNMPVK 238
ACS+ + E M V Y RK L + +V + G+ G L + L+ + +
Sbjct: 121 ACSNLPMPEGLM--MGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGR 178
Query: 239 ANAIIWKTLLSA-CKTHKSTDMAGRIAEEIL-GVNPQD 274
+ + W T+LS+ C+ + + + E +L GV P +
Sbjct: 179 -DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDE 215
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 98/199 (49%), Gaps = 5/199 (2%)
Query: 1 GFELDLVA-GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQ 59
G+ +D V ++L ++Y K G KV + RN ++W +LI+ E L+
Sbjct: 40 GYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEA 99
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELAT---LGQGQQIHAEVVKAGASLDVGVISSLISM 116
+ M P T VSV+++CS L L G+Q+HA ++ G L+ +I++L++M
Sbjct: 100 FRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAM 158
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
Y + G L S D+V W++++++ + + EA+ +M + E ++ T
Sbjct: 159 YGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTI 218
Query: 177 VSLLYACSHCGLKEKGMEF 195
S+L ACSH + G E
Sbjct: 219 SSVLPACSHLEMLRTGKEL 237
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 345 bits (885), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 181/456 (39%), Positives = 268/456 (58%), Gaps = 26/456 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVL--- 57
G + D ++L MY + G + ++ M R+++ W T+I G + ED L
Sbjct: 435 GLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLL 494
Query: 58 -DQYNLMR-------MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV 109
NL R V +P+ IT ++++ SC+ L+ L +G++IHA +K + DV V
Sbjct: 495 HKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAV 554
Query: 110 ISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEF 169
S+L+ MY++CGCL S K F + +V+ W+ +I AYG HG G+EAI+L M +
Sbjct: 555 GSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGV 614
Query: 170 EANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAA 229
+ N+VTF+S+ ACSH G+ ++G+ F +M Y +P +HY CVVDLLGR G + EA
Sbjct: 615 KPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAY 674
Query: 230 ALIRNMPVKAN-AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASA 288
L+ MP N A W +LL A + H + ++ A+ ++ + P A+ YVLL+NI++SA
Sbjct: 675 QLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSA 734
Query: 289 KRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEM 348
W +E R M+E+ V+KEPG SW+E ++VH+F GD SHP+S ++ YLE L M
Sbjct: 735 GLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERM 794
Query: 349 KLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVM------------ 394
+ GYVPDT +H+++ +EKE L HSEKLAIAF + G I+
Sbjct: 795 RKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCH 854
Query: 395 LPFKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
L K+IS+I +REII+RD RFH F+NG CSCGDYW
Sbjct: 855 LATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 127/280 (45%), Gaps = 16/280 (5%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY-NLMRMVG 67
GS+L MY ++ G +V M R + W +IAG +QN ++ L + + G
Sbjct: 341 GSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAG 400
Query: 68 FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV 127
+ T V+ +C + + IH VVK G D V ++L+ MYSR G +D ++
Sbjct: 401 LLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAM 460
Query: 128 KTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE-----------FEANDVTF 176
+ F + E D+V W++MI Y F E+A+ L +M+ E + N +T
Sbjct: 461 RIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITL 520
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
+++L +C+ KG E +K + + +VD+ +CG L + + +P
Sbjct: 521 MTILPSCAALSALAKGKEIHAYAIKN-NLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP 579
Query: 237 VKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQD 274
K N I W ++ A H + A + ++ GV P +
Sbjct: 580 QK-NVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNE 618
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 120/251 (47%), Gaps = 6/251 (2%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
EL+ ++L MY K G L + ++ R+++ W T+++ QN + L+
Sbjct: 233 ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLRE 292
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVG--VISSLISMYSRC 120
M + G PD+ T SV+ +CS L L G+++HA +K G SLD V S+L+ MY C
Sbjct: 293 MVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNG-SLDENSFVGSALVDMYCNC 351
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE-FEANDVTFVSL 179
+ + F + LW++MIA Y + +EA+ LF ME+ AN T +
Sbjct: 352 KQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGV 411
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
+ AC G + +VK+ + R T ++D+ R G +D A + M +
Sbjct: 412 VPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNT-LMDMYSRLGKIDIAMRIFGKMEDR- 469
Query: 240 NAIIWKTLLSA 250
+ + W T+++
Sbjct: 470 DLVTWNTMITG 480
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 127/261 (48%), Gaps = 9/261 (3%)
Query: 20 GSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVI 79
S V G I + R+ WI L+ K ++ L + + Y M ++G +PD F +++
Sbjct: 45 ASAVSGAPSIFISQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALL 104
Query: 80 SSCSELATLGQGQQIHAEVVKAGASLD-VGVISSLISMYSRCGCLDDSVKTFLECEYSDV 138
+ ++L + G+QIHA V K G +D V V ++L+++Y +CG K F +
Sbjct: 105 KAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQ 164
Query: 139 VLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDL 198
V W+S+I++ K E A+ F M + E + T VS++ ACS+ + E M
Sbjct: 165 VSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLM--MGK 222
Query: 199 MVKKY-RRKPRLEHY--TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA-CKTH 254
V Y RK L + +V + G+ G L + L+ + + + + W T+LS+ C+
Sbjct: 223 QVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGR-DLVTWNTVLSSLCQNE 281
Query: 255 KSTDMAGRIAEEIL-GVNPQD 274
+ + + E +L GV P +
Sbjct: 282 QLLEALEYLREMVLEGVEPDE 302
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 98/199 (49%), Gaps = 5/199 (2%)
Query: 1 GFELDLVA-GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQ 59
G+ +D V ++L ++Y K G KV + RN ++W +LI+ E L+
Sbjct: 127 GYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEA 186
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELAT---LGQGQQIHAEVVKAGASLDVGVISSLISM 116
+ M P T VSV+++CS L L G+Q+HA ++ G L+ +I++L++M
Sbjct: 187 FRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAM 245
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
Y + G L S D+V W++++++ + + EA+ +M + E ++ T
Sbjct: 246 YGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTI 305
Query: 177 VSLLYACSHCGLKEKGMEF 195
S+L ACSH + G E
Sbjct: 306 SSVLPACSHLEMLRTGKEL 324
>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 790
Score = 345 bits (885), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 168/446 (37%), Positives = 274/446 (61%), Gaps = 25/446 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
DLV+ ++L Y+ SG + E + + + M +N+++W+ +I+G A+NG E+ L ++ M+
Sbjct: 350 DLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMK 409
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
GF P F I SC+ L GQQ HA+++K G + ++LI+MY++CG ++
Sbjct: 410 REGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVE 469
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
++ + F D V W+++IAA G HG G EA++++E+M +K + +T +++L ACS
Sbjct: 470 EARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACS 529
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL ++G ++FD M YR P +HY ++DLL R G +A ++I ++P K A IW
Sbjct: 530 HAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIW 589
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
+ LLS C+ H + ++ A+++ G+ P+ Y+LLSN+HA+ +W+ V+ R+ MR+R
Sbjct: 590 EALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDR 649
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
VKKE SW+E++ QVH F + D SHP + + +YL++L EM+ GYVPDT +HD+
Sbjct: 650 GVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDV 709
Query: 365 DSE-EKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIK 404
+S+ KE L HSEK+A+AF GL+ + P F+++S +
Sbjct: 710 ESDGHKEDMLTTHSEKIAVAF-----GLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVV 764
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
R+II+RD RFHHFRNG+CSCG++W
Sbjct: 765 QRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 137/305 (44%), Gaps = 37/305 (12%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIR-NVIAWITLIAGKAQNGLAEDVLDQY 60
E D + +++ Y+K+G GE+++ M ++A+ +I+G G ++ L+
Sbjct: 215 LEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMV 274
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G D+ T+ SVI +C+ L G+Q+HA V++ +SL+S+Y +C
Sbjct: 275 RRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRR-EDFSFHFDNSLVSLYYKC 333
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAY-------------------------------G 149
G D++ F + D+V W+++++ Y
Sbjct: 334 GKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLA 393
Query: 150 FHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRL 209
+G GEE + LF M+++ FE D F + +C+ G G ++ ++ K L
Sbjct: 394 ENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLL-KIGFDSSL 452
Query: 210 EHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL- 268
++ + +CG ++EA + R MP +++ W L++A H A + EE+L
Sbjct: 453 SAGNALITMYAKCGVVEEARQVFRTMPC-LDSVSWNALIAALGQHGHGAEAVDVYEEMLK 511
Query: 269 -GVNP 272
G+ P
Sbjct: 512 KGIRP 516
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 128/288 (44%), Gaps = 44/288 (15%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPI--RNVIAWITLIAGKAQNGLAEDVLDQY 60
E D +A +++ Y SG + V P+ R+ + + +I G + N ++ +
Sbjct: 77 EPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLF 136
Query: 61 NLMRMVGFRPDKITFVSVISSCSELA-TLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
M+ GF+PD TF SV++ + +A Q Q HA +K+GA V ++L+S+YS+
Sbjct: 137 CKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSK 196
Query: 120 CGC----LDDSVKTFLECEYSDVVLWSSMIAAY--------------------------- 148
C L + K F E D W++M+ Y
Sbjct: 197 CASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNA 256
Query: 149 ---GFHGKG--EEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKY 203
G+ +G +EA+ + +M E ++ T+ S++ AC+ GL + G + ++
Sbjct: 257 MISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVL--- 313
Query: 204 RRKPRLEHY-TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
RR+ H+ +V L +CG DEA A+ MP K + + W LLS
Sbjct: 314 RREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAK-DLVSWNALLSG 360
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 80/161 (49%), Gaps = 4/161 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ L AG++L MY K G + E +V R MP + ++W LIA Q+G + +D Y
Sbjct: 447 GFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVY 506
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV--ISSLISMYS 118
M G RPD+IT ++V+++CS + QG++ + + ++ + G + LI +
Sbjct: 507 EEMLKKGIRPDRITLLTVLTACSHAGLVDQGRK-YFDSMETVYRIPPGADHYARLIDLLC 565
Query: 119 RCGCLDDSVKTFLECEYSDVV-LWSSMIAAYGFHGKGEEAI 158
R G D+ + +W ++++ HG E I
Sbjct: 566 RSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGI 606
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 345 bits (885), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 171/444 (38%), Positives = 270/444 (60%), Gaps = 15/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E++ SL MY K G + + + M N+I W +I+G A+NG A + +D +
Sbjct: 252 GLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMF 311
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M RPD I+ S IS+C+++ +L Q + ++ V ++ DV + S+LI M+++C
Sbjct: 312 HEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKC 371
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ + F DVV+WS+MI YG HG+ EAI+L+ ME+ NDVTF+ LL
Sbjct: 372 GSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLL 431
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+H G+ +G FF+LM ++ P+ +HY CV+DLLGR G+LD+A +I+ MPV+
Sbjct: 432 MACNHSGMVREGWWFFNLMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPG 490
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+W LLSACK H+ ++ A+++ ++P + YV LSN++A+A+ W V+E R
Sbjct: 491 VTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVR 550
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+E+ + K+ G SW+E++ ++ F +GDKSHPR EI+ +E + S +K G+V + A
Sbjct: 551 MKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDAS 610
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA----------EHTRGLIVML----PFKYISEIKNR 406
+HD++ EE E L HSE++AIA+ T+ L + K IS++ +R
Sbjct: 611 LHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDR 670
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EI+VRD +RFHHF++G CSCGDYW
Sbjct: 671 EIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 150/286 (52%), Gaps = 8/286 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPI--RNVIAWITLIAGKAQNGLAEDVLD 58
GF+ D+ + L +Y K L V +P+ R +++W +++ AQNG + L+
Sbjct: 149 GFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALE 208
Query: 59 QYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
++ MR + +PD + VSV+++ + L L QG+ IHA VVK G ++ ++ SL +MY+
Sbjct: 209 IFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYA 268
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+CG + + F + + +++LW++MI+ Y +G EAI++F +M K+ + ++ S
Sbjct: 269 KCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITS 328
Query: 179 LLYACSHCGLKEKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
+ AC+ G E+ ++ + + YR + + ++D+ +CG + E A L+ + +
Sbjct: 329 AISACAQVGSLEQARSMYEYVGRSDYRDDVFIS--SALIDMFAKCGSV-EGARLVFDRTL 385
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRI--AEEILGVNPQDAAPYVLL 281
+ ++W ++ H A + A E GV+P D LL
Sbjct: 386 DRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLL 431
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 117/244 (47%), Gaps = 6/244 (2%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+ L H G + +V +P + W +I G ++N +D L Y+ M++
Sbjct: 57 TKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVS 116
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
PD TF ++ +CS L+ L G+ +HA+V + G DV V + LI++Y++C L +
Sbjct: 117 PDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTV 176
Query: 130 F--LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCG 187
F L +V W+++++AY +G+ EA+ +F M + + + + V VS+L A +
Sbjct: 177 FEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQ 236
Query: 188 LKEKGMEFFDLMVK-KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKT 246
++G +VK +P L + + +CG + A L M N I+W
Sbjct: 237 DLKQGRSIHASVVKMGLEIEPDL--LISLNTMYAKCGQVATAKILFDKMK-SPNLILWNA 293
Query: 247 LLSA 250
++S
Sbjct: 294 MISG 297
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 345 bits (885), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 181/456 (39%), Positives = 268/456 (58%), Gaps = 26/456 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVL--- 57
G + D ++L MY + G + ++ M R+++ W T+I G + ED L
Sbjct: 435 GLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLL 494
Query: 58 -DQYNLMR-------MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV 109
NL R V +P+ IT ++++ SC+ L+ L +G++IHA +K + DV V
Sbjct: 495 HKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAV 554
Query: 110 ISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEF 169
S+L+ MY++CGCL S K F + +V+ W+ +I AYG HG G+EAI+L M +
Sbjct: 555 GSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGV 614
Query: 170 EANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAA 229
+ N+VTF+S+ ACSH G+ ++G+ F +M Y +P +HY CVVDLLGR G + EA
Sbjct: 615 KPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAY 674
Query: 230 ALIRNMPVKAN-AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASA 288
L+ MP N A W +LL A + H + ++ A+ ++ + P A+ YVLL+NI++SA
Sbjct: 675 QLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSA 734
Query: 289 KRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEM 348
W +E R M+E+ V+KEPG SW+E ++VH+F GD SHP+S ++ YLE L M
Sbjct: 735 GLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERM 794
Query: 349 KLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVM------------ 394
+ GYVPDT +H+++ +EKE L HSEKLAIAF + G I+
Sbjct: 795 RKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCH 854
Query: 395 LPFKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
L K+IS+I +REII+RD RFH F+NG CSCGDYW
Sbjct: 855 LATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 127/280 (45%), Gaps = 16/280 (5%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY-NLMRMVG 67
GS+L MY ++ G +V M R + W +IAG +QN ++ L + + G
Sbjct: 341 GSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAG 400
Query: 68 FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV 127
+ T V+ +C + + IH VVK G D V ++L+ MYSR G +D ++
Sbjct: 401 LLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAM 460
Query: 128 KTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE-----------FEANDVTF 176
+ F + E D+V W++MI Y F E+A+ L +M+ E + N +T
Sbjct: 461 RIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITL 520
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
+++L +C+ KG E +K + + +VD+ +CG L + + +P
Sbjct: 521 MTILPSCAALSALAKGKEIHAYAIKN-NLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP 579
Query: 237 VKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQD 274
K N I W ++ A H + A + ++ GV P +
Sbjct: 580 QK-NVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNE 618
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 120/251 (47%), Gaps = 6/251 (2%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
EL+ ++L MY K G L + ++ R+++ W T+++ QN + L+
Sbjct: 233 ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLRE 292
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVG--VISSLISMYSRC 120
M + G PD+ T SV+ +CS L L G+++HA +K G SLD V S+L+ MY C
Sbjct: 293 MVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNG-SLDENSFVGSALVDMYCNC 351
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE-FEANDVTFVSL 179
+ + F + LW++MIA Y + +EA+ LF ME+ AN T +
Sbjct: 352 KQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGV 411
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
+ AC G + +VK+ + R T ++D+ R G +D A + M +
Sbjct: 412 VPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNT-LMDMYSRLGKIDIAMRIFGKMEDR- 469
Query: 240 NAIIWKTLLSA 250
+ + W T+++
Sbjct: 470 DLVTWNTMITG 480
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 127/261 (48%), Gaps = 9/261 (3%)
Query: 20 GSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVI 79
S V G I + R+ WI L+ K ++ L + + Y M ++G +PD F +++
Sbjct: 45 ASAVSGAPSIFISQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALL 104
Query: 80 SSCSELATLGQGQQIHAEVVKAGASLD-VGVISSLISMYSRCGCLDDSVKTFLECEYSDV 138
+ ++L + G+QIHA V K G +D V V ++L+++Y +CG K F +
Sbjct: 105 KAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQ 164
Query: 139 VLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDL 198
V W+S+I++ K E A+ F M + E + T VS++ ACS+ + E M
Sbjct: 165 VSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLM--MGK 222
Query: 199 MVKKY-RRKPRLEHY--TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA-CKTH 254
V Y RK L + +V + G+ G L + L+ + + + + W T+LS+ C+
Sbjct: 223 QVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGR-DLVTWNTVLSSLCQNE 281
Query: 255 KSTDMAGRIAEEIL-GVNPQD 274
+ + + E +L GV P +
Sbjct: 282 QLLEALEYLREMVLEGVEPDE 302
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 98/199 (49%), Gaps = 5/199 (2%)
Query: 1 GFELDLVA-GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQ 59
G+ +D V ++L ++Y K G KV + RN ++W +LI+ E L+
Sbjct: 127 GYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEA 186
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELAT---LGQGQQIHAEVVKAGASLDVGVISSLISM 116
+ M P T VSV+++CS L L G+Q+HA ++ G L+ +I++L++M
Sbjct: 187 FRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAM 245
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
Y + G L S D+V W++++++ + + EA+ +M + E ++ T
Sbjct: 246 YGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTI 305
Query: 177 VSLLYACSHCGLKEKGMEF 195
S+L ACSH + G E
Sbjct: 306 SSVLPACSHLEMLRTGKEL 324
>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 345 bits (885), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 179/445 (40%), Positives = 261/445 (58%), Gaps = 17/445 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E D+ S+L Y K G + V M +++ W ++I G AQN ++ L Y
Sbjct: 144 GLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQNSDGDETLHLY 203
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ F D+ T SV+ +C+ LA L G+Q+H V+K L + ++L+ MY +C
Sbjct: 204 KRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLKYDQDLILN--NALLDMYCKC 261
Query: 121 GCLDDSVKTFLEC-EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G L+D+ F DV+ WS+MIA +G +A+ LFE M+ K + N +T + +
Sbjct: 262 GSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYITILGV 321
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L+ACSH GL G +F M + + P EHY C++DLLGR G LDEA LI M +
Sbjct: 322 LFACSHAGLVNDGWYYFQSMKEHFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMNHEP 381
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
+A+ W+ LL AC+ HK+ D+A A+EIL ++P DA Y+LLSNI+A++++W+ V+E R
Sbjct: 382 DAVTWRILLGACRVHKNVDLAIYAAKEILKLDPADAGTYILLSNIYANSQKWEDVAEVRR 441
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
MR R VKK+PG SW+E+ QVH F +GD SHPR EI L +L + GYVPDT
Sbjct: 442 KMRTRGVKKDPGCSWIEVSKQVHAFILGDNSHPRIEEIKRELSQLIQRLMRLGYVPDTNF 501
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFAE---------HTRGLIVM-----LPFKYISEIKN 405
+ D++ E+ E +L++HSEKLAI F H R + + + K +S+++N
Sbjct: 502 VLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPNQKTIHIRKNLRICGDCHIFAKLVSQLEN 561
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
R I++RD R+HHFR G CSCGDYW
Sbjct: 562 RVIVIRDPIRYHHFRGGVCSCGDYW 586
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 146/273 (53%), Gaps = 6/273 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+E ++L +MY+K G L E + MP RNV++W T+I+ + + L LD
Sbjct: 46 GYEPKTFLINTLINMYVKFGLLDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFL 105
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
LM G RP+ T+ SV+ +C L L +Q+H ++K G DV V S+LI YS+
Sbjct: 106 ILMLREGVRPNMYTYSSVLRACDGLLNL---RQLHGSILKVGLESDVFVRSALIDTYSKL 162
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G D++ F E D+V+W+S+I + + G+E ++L+++M++ +F A+ T S+L
Sbjct: 163 GEQHDALNVFNEMITGDLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVL 222
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+ L E G + + V KY + L + ++D+ +CG L++A L M + +
Sbjct: 223 RACTGLALLELGRQVH-VHVLKYDQDLILNN--ALLDMYCKCGSLEDANLLFTRMMTEKD 279
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQ 273
I W T+++ + + A ++ E + P+
Sbjct: 280 VISWSTMIAGLAQNGFSADALKLFEAMKSKGPK 312
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 87/196 (44%), Gaps = 21/196 (10%)
Query: 71 DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTF 130
D IT+ +I C + Q + +H V G +I++LI+MY + G LD++ F
Sbjct: 15 DAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEARNLF 74
Query: 131 LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS------ 184
E +VV W++MI+AY +A++ M ++ N T+ S+L AC
Sbjct: 75 DEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACDGLLNLR 134
Query: 185 --HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
H + + G+E D+ V+ + ++D + G +A + M + + +
Sbjct: 135 QLHGSILKVGLE-SDVFVR-----------SALIDTYSKLGEQHDALNVFNEM-ITGDLV 181
Query: 243 IWKTLLSACKTHKSTD 258
+W +++ + D
Sbjct: 182 VWNSIIGGFAQNSDGD 197
>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
Length = 637
Score = 345 bits (884), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 171/440 (38%), Positives = 261/440 (59%), Gaps = 15/440 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ GS+L MY + G + V + +N ++W LIAG A+ G E L + M+
Sbjct: 199 DVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQ 258
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
GF T+ SV S+ + + L QG+ +HA ++K+G L V ++++ MY++ G +
Sbjct: 259 RNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMI 318
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D+ K F + DVV W+SM+ A+ +G G EA+ FE+M + N +TF+S+L ACS
Sbjct: 319 DARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACS 378
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL ++G ++FD+M K+Y +P ++HY VVDLLGR G L++A I MP+K A +W
Sbjct: 379 HGGLVKEGKQYFDMM-KEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVW 437
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
LL +C+ HK+ + A+ + ++P D P VLL NI+AS +W + R+ M+
Sbjct: 438 GALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRKMMKAT 497
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
VKKEP SW+EI+N VH F D +HPRS EI EE++ +++ GYVP+T + +
Sbjct: 498 GVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAGYVPNTDYVLLHV 557
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVML--------------PFKYISEIKNREIIV 410
D +E++ L++HSEK+A+AFA L + F+YIS++ REI+V
Sbjct: 558 DEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFRYISKVFKREIVV 617
Query: 411 RDASRFHHFRNGKCSCGDYW 430
RD +RFHHF +G CSCGDYW
Sbjct: 618 RDTNRFHHFSSGSCSCGDYW 637
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 131/241 (54%), Gaps = 2/241 (0%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+SL H+Y K G++ + +V MP R++ +W +LIAG AQN + ++ L M F+
Sbjct: 103 NSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFK 162
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P+ TF S++ + A+ G G+QIHA VK DV V S+L+ MY+RCG +D ++
Sbjct: 163 PNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAV 222
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F + E + V W+++IA + G GE + +F +M++ FEA T+ S+ A + G
Sbjct: 223 FDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGAL 282
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
E+G M+K R T ++D+ + G + +A + + K + + W ++L+
Sbjct: 283 EQGKWVHAHMIKSGERLSAFVGNT-ILDMYAKSGSMIDARKVFDRVD-KKDVVTWNSMLT 340
Query: 250 A 250
A
Sbjct: 341 A 341
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 98/207 (47%), Gaps = 5/207 (2%)
Query: 44 IAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGA 103
+ A G+ D LD + R + P + S+I++C+ +L + IHA + +
Sbjct: 39 VPAAASTGIIRDTLDSVD-ARELAATPR--LYHSLITACARYRSLDDARAIHAHLAGSQF 95
Query: 104 SLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQ 163
+ V + +SLI +Y +CG + D+ + F D+ W+S+IA Y + +EA+ L
Sbjct: 96 AGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPG 155
Query: 164 MEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCG 223
M + F+ N TF SLL A G + L V KY + + ++D+ RCG
Sbjct: 156 MLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTV-KYDWHDDVYVGSALLDMYARCG 214
Query: 224 YLDEAAALIRNMPVKANAIIWKTLLSA 250
+D A A+ + K N + W L++
Sbjct: 215 RMDMAIAVFDQLESK-NGVSWNALIAG 240
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 87/182 (47%), Gaps = 3/182 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G L G+++ MY KSGS+++ KV + ++V+ W +++ AQ GL + + +
Sbjct: 296 GERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHF 355
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
MR G ++ITF+S++++CS + +G+Q + + ++ +++ + R
Sbjct: 356 EEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRA 415
Query: 121 GCLDDS-VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G L+D+ V F +W +++ + H + I F E + +D L
Sbjct: 416 GLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAK--IGQFAADHVFELDPDDTGPPVL 473
Query: 180 LY 181
LY
Sbjct: 474 LY 475
>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 649
Score = 345 bits (884), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 170/437 (38%), Positives = 271/437 (62%), Gaps = 16/437 (3%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L MY + G + V MP++NV++W +IA A+NG + L+ + M +
Sbjct: 213 TTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHD 272
Query: 70 --PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV 127
P+ +T VSV+ +C+ A L QG+ IHA +++ G + VIS+LI+MY+RCG L+
Sbjct: 273 SVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQ 332
Query: 128 KTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCG 187
F DVVLW+S+I++YG HG G +AI +FE+M F + ++F+S+L ACSH G
Sbjct: 333 LIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTG 392
Query: 188 LKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTL 247
L E+G + F+ MVK++ +P +EHY C+VDLLGR LDEAA +I ++ ++ +W +L
Sbjct: 393 LVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSL 452
Query: 248 LSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVK 307
L AC+ H ++A R ++ + + P +A YVLL++I+A A+ W V ++ + R ++
Sbjct: 453 LGACRIHCHVELAERASKRLFKLEPTNAGNYVLLADIYAEAEMWDEVKRVKKLLDSRELQ 512
Query: 308 KEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSE 367
K PG SW+E++ +++ FT D+ +P+ ++ L L++EMK RGY P T ++D+D E
Sbjct: 513 KVPGRSWIEVRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKLVLYDLDQE 572
Query: 368 EKEYNLKHHSEKLAIAFA--EHTRGLIVMLP------------FKYISEIKNREIIVRDA 413
EKE + HSEKLA+AF ++G + + K+IS+ +REI+VRD
Sbjct: 573 EKERIVLGHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDL 632
Query: 414 SRFHHFRNGKCSCGDYW 430
+RFHHF++G CSCGDYW
Sbjct: 633 NRFHHFKDGVCSCGDYW 649
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 157/320 (49%), Gaps = 12/320 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ D + L +M+ + ++ KV R + W L A G DVL+ Y
Sbjct: 99 GFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELY 158
Query: 61 NLMRMVGFRPDKITFVSVISSC--SE--LATLGQGQQIHAEVVKAGASLDVGVISSLISM 116
M M+G D+ T+ ++ +C SE ++ L +G++IHA +++ G V V+++L+ M
Sbjct: 159 PRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDM 218
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEA--NDV 174
Y+R GC+ + F E +VV WS+MIA Y +GK EA+ LF +M ++ N V
Sbjct: 219 YARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSV 278
Query: 175 TFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRN 234
T VS+L AC+ E+G + + + L + ++ + RCG L E+ LI +
Sbjct: 279 TMVSVLQACAAFAALEQG-KLIHAYILRRGLDSILPVISALITMYARCGKL-ESGQLIFD 336
Query: 235 MPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQ 292
K + ++W +L+S+ H A +I EE++ G +P + +L + +
Sbjct: 337 RMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEE 396
Query: 293 GVSEFREAMRERNVKKEPGV 312
G F ++E + +P V
Sbjct: 397 GKKLFESMVKEHGI--QPSV 414
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 107/238 (44%), Gaps = 12/238 (5%)
Query: 49 QNGLAEDVLDQYNLMRMVGF-----RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGA 103
N L + + Q NL + + P + T +I S + +L +H +V G
Sbjct: 41 NNHLIQSLCKQGNLKQALYLLSHESNPTQQTCELLILSAARRNSLSDALDVHQLLVDGGF 100
Query: 104 SLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQ 163
D + + LI+M+S +D++ K F + + +W+++ A G+G + + L+ +
Sbjct: 101 DQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPR 160
Query: 164 MEQKEFEANDVTFVSLLYAC--SHC--GLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLL 219
M ++ T+ LL AC S C +KG E ++ ++ + T ++D+
Sbjct: 161 MNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHIL-RHGYGAHVHVMTTLMDMY 219
Query: 220 GRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAP 277
R G + A+A+ MPVK N + W +++ + A + E++ +N D+ P
Sbjct: 220 ARFGCVSYASAVFDEMPVK-NVVSWSAMIACYAKNGKPYEALELFREMM-LNTHDSVP 275
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 345 bits (884), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 178/444 (40%), Positives = 265/444 (59%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G DL AG+SL MY K+G + + + M +++ +++ L++G QNG A++ +
Sbjct: 365 GLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVF 424
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ +PD T VS+I +CS LA L G+ H V+ G + + + ++LI MY++C
Sbjct: 425 RKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKC 484
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +D S + F D+V W++MIA YG HG G+EA LF M+ + E +DVTF+ L+
Sbjct: 485 GRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLI 544
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL +G +F +M KY PR+EHY +VDLL R G+LDEA I+ MP+KA+
Sbjct: 545 SACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKAD 604
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+W LL AC+ HK+ D+ +++ I + P+ +VLLSNI ++A R+ +E R
Sbjct: 605 VRVWGALLGACRVHKNIDLGKQVSSMIQQLGPEGTGNFVLLSNIFSAAGRFDEAAEVRII 664
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
+E+ KK PG SW+EI +H F GD+SH +S EI L+ + ++ GY DT
Sbjct: 665 QKEQGFKKSPGCSWIEINGSLHAFIGGDRSHAQSSEIYQELDNILVDINKLGYRADTSFV 724
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHT----RGLIVM----------LPFKYISEIKNR 406
+ D++ EEKE L +HSEKLAIAF T + + V KY++ ++ R
Sbjct: 725 LQDVEEEEKEKALLYHSEKLAIAFGVLTLSEDKTIFVTKNLRVCGDCHTVIKYMTLVRKR 784
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
IIVRDA+RFHHF+NG+CSCGD+W
Sbjct: 785 AIIVRDANRFHHFKNGQCSCGDFW 808
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 126/253 (49%), Gaps = 9/253 (3%)
Query: 6 LVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRM 65
++ G++L MY K G LV +V M +RN + W L+ G G + + M
Sbjct: 268 VLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRMLEAFSLFKDMLA 327
Query: 66 VGF---RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
G P + S + +C+ L+ L G+Q+HA + K+G D+ +SL+SMY++ G
Sbjct: 328 QGLCFLSPTSVA--SALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGL 385
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
+D + F + D V +S++++ Y +GK +EA +F +M+ + + T VSL+ A
Sbjct: 386 IDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPA 445
Query: 183 CSHCGLKEKG-MEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
CSH + G ++V+ + + ++D+ +CG +D + + MP + +
Sbjct: 446 CSHLAALQHGKCGHGSVIVRGIASETSI--CNALIDMYAKCGRIDLSRQIFDVMPAR-DI 502
Query: 242 IIWKTLLSACKTH 254
+ W T+++ H
Sbjct: 503 VSWNTMIAGYGIH 515
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 133/287 (46%), Gaps = 9/287 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G DL ++L +Y K S V R MP R+V+AW ++AG A +G D +
Sbjct: 159 GLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDVVAWNAMLAGYALHGKYSDTIACL 218
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLD----VGVISSLISM 116
LM+ P+ T V+++ ++ L QG+ +HA V+A + D V V ++L+ M
Sbjct: 219 LLMQ-DDHAPNASTLVALLPLLAQHGALSQGRAVHAYSVRACSLHDHKDGVLVGTALLDM 277
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM-EQKEFEANDVT 175
Y++CG L + + F + V WS+++ + G+ EA +LF+ M Q + +
Sbjct: 278 YAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTS 337
Query: 176 FVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM 235
S L AC++ G + L+ K L ++ + + G +D+A L M
Sbjct: 338 VASALRACANLSDLCLGKQLHALLAKSGLHT-DLTAGNSLLSMYAKAGLIDQATTLFDQM 396
Query: 236 PVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQ-DAAPYVLL 281
VK + + + L+S + D A R+ ++ N Q D A V L
Sbjct: 397 VVK-DTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSL 442
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 104/238 (43%), Gaps = 5/238 (2%)
Query: 14 HMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKI 73
H M G L + +P + + LI + G A + +L R +P+
Sbjct: 71 HNRMICGDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNY 130
Query: 74 TFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLEC 133
TF V+ +CS L L + +H +AG D+ V ++L+ +Y++C + F
Sbjct: 131 TFPFVLKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRM 190
Query: 134 EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGM 193
DVV W++M+A Y HGK + I M Q + N T V+LL + G +G
Sbjct: 191 PARDVVAWNAMLAGYALHGKYSDTIACLLLM-QDDHAPNASTLVALLPLLAQHGALSQGR 249
Query: 194 EFFDLMVKK---YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
V+ + K + T ++D+ +CG+L A+ + M V+ N + W L+
Sbjct: 250 AVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVR-NEVTWSALV 306
>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 345 bits (884), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 176/444 (39%), Positives = 271/444 (61%), Gaps = 16/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ D+ + MYMK GS+ +K+ MP++ +I+W +++G AQNGLA +VL+ Y
Sbjct: 182 GFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELY 241
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M M G PD +T V V+SSC+ L G ++ ++ +G + + + ++LI+MY+RC
Sbjct: 242 RNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARC 301
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L + F +V W+++I YG HG GE A+ LF++M + E + FV +L
Sbjct: 302 GNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVL 361
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL ++G+E+F +M + Y+ +P EHY+C+VDLLGR G L EA LI +MP+K +
Sbjct: 362 SACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPD 421
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+W LL ACK HK+ ++A E ++ + P++ YVLLSNI+++A +GV R
Sbjct: 422 GAVWGALLGACKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIM 481
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+E+ +KK+PG S++E+K +VH F +GD++H +S EI LEEL + + P+ D
Sbjct: 482 MKEKKLKKDPGCSYVELKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQEFGKPEK--D 539
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVM------------LPFKYISEIKNR 406
+ +++ + HSEKLA+AF T G V+ L FK +S+I +R
Sbjct: 540 NREESNKDGFTRVGVHSEKLAVAFGLLNTTTGAEVVIIKNLRICEDCHLFFKMVSKIVHR 599
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
++ VRDA+RFHHFRNG CSC DYW
Sbjct: 600 QLTVRDATRFHHFRNGSCSCKDYW 623
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 144/308 (46%), Gaps = 12/308 (3%)
Query: 10 SSLAHMYMKSGSLVEGEKVI---RLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV 66
+ L MY K GSLV+ + + + + + L++G N + + + M
Sbjct: 88 TGLISMYCK-GSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEAVLLFRQMNEE 146
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
G + +T + +I +C L G +H +K G DV V++ I+MY +CG ++ +
Sbjct: 147 GVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYA 206
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHC 186
K F E ++ W++M++ Y +G + L+ M+ + VT V +L +C++
Sbjct: 207 QKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANL 266
Query: 187 GLKEKGMEF-FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
G + G E F + + P L + ++++ RCG L +A A+ MP + + W
Sbjct: 267 GAQSVGHEVEFKIQASGFTSNPFLNN--ALINMYARCGNLTKAQAVFDGMPERT-LVSWT 323
Query: 246 TLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
++ H ++A ++ +E++ G+ P A +LS + QG+ F+ M +
Sbjct: 324 AIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFK--MMK 381
Query: 304 RNVKKEPG 311
RN + EPG
Sbjct: 382 RNYQLEPG 389
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 4/213 (1%)
Query: 40 WITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVV 99
W T + A+ L Y M G RP+ TF + SC+ L+ G Q H ++
Sbjct: 17 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 76
Query: 100 KAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSD--VVLWSSMIAAYGFHGKGEEA 157
K G + V + LISMY + +D++ K F E +S V ++++++ Y + K EA
Sbjct: 77 KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEA 136
Query: 158 INLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVD 217
+ LF QM ++ N VT + L+ AC E G KY + C +
Sbjct: 137 VLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSS-LHCSTLKYGFDSDVSVVNCFIT 195
Query: 218 LLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+ +CG ++ A L MPVK I W ++S
Sbjct: 196 MYMKCGSVNYAQKLFDEMPVKG-LISWNAMVSG 227
>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 1135
Score = 345 bits (884), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 183/474 (38%), Positives = 270/474 (56%), Gaps = 49/474 (10%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D ++L MY + G + + + M R++++W T+I G G +D L+
Sbjct: 667 GFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDALNLL 726
Query: 61 NLMRM------------------VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAG 102
+ M+ V F+P+ +T ++V+ C+ LA LG+G++IHA VK
Sbjct: 727 HEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQK 786
Query: 103 ASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFE 162
++DV V S+L+ MY++CGCL+ + + F + +V+ W+ +I AYG HGKGEEA+ LF
Sbjct: 787 LAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGKGEEALELFR 846
Query: 163 QM------EQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVV 216
M ++ N+VT++++ ACSH G+ ++G+ F M + +PR +HY C+V
Sbjct: 847 IMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMKASHGVEPRGDHYACLV 906
Query: 217 DLLGRCGYLDEAAALIRNMPVKANAI-IWKTLLSACKTHKSTDMAGRIAEEILGVNPQDA 275
DLLGR G + EA LI MP N + W +LL AC+ H+S + A+ + + P A
Sbjct: 907 DLLGRSGRVKEAYELINTMPSNLNKVDAWSSLLGACRIHQSVEFGEIAAKHLFVLEPNVA 966
Query: 276 APYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSM 335
+ YVL+SNI++SA W R+ M+E V+KEPG SW+E ++VH+F GD SHP+S
Sbjct: 967 SHYVLMSNIYSSAGLWDQALGVRKKMKEMGVRKEPGCSWIEHGDEVHKFLSGDASHPQSK 1026
Query: 336 EIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVML 395
E+ YLE L+ M+ GYVPD +H++D EEKE L HSE+LAIAF GL+
Sbjct: 1027 ELHEYLETLSQRMRKEGYVPDISCVLHNVDDEEKETMLCGHSERLAIAF-----GLLNTP 1081
Query: 396 P-------------------FKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
P K IS+I +REII+RD RFHHF NG CSCGDYW
Sbjct: 1082 PGTTIRVAKNLRVCNDCHVATKIISKIVDREIILRDVRRFHHFANGTCSCGDYW 1135
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 122/265 (46%), Gaps = 21/265 (7%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY-NLMRMVG 67
G++L MY +G V + R V W L+AG A+N + L + ++
Sbjct: 573 GTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESE 632
Query: 68 FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV 127
F P+ TF SV+ +C + IH +VK G D V ++L+ MYSR G ++ S
Sbjct: 633 FCPNATTFASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISK 692
Query: 128 KTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE------------------F 169
F D+V W++MI G+ ++A+NL +M++++ F
Sbjct: 693 TIFGRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPF 752
Query: 170 EANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAA 229
+ N VT +++L C+ KG E VK+ + + + +VD+ +CG L+ A+
Sbjct: 753 KPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQ-KLAMDVAVGSALVDMYAKCGCLNLAS 811
Query: 230 ALIRNMPVKANAIIWKTLLSACKTH 254
+ MP++ N I W L+ A H
Sbjct: 812 RVFDQMPIR-NVITWNVLIMAYGMH 835
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 124/251 (49%), Gaps = 4/251 (1%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
+L ++L MY + G + + + + + +++++W T+I+ +QN E+ L L
Sbjct: 465 DLRTYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYL 524
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVI-SSLISMYSRCG 121
M + G RPD +T SV+ +CS+L L G++IH ++ G ++ + ++L+ MY C
Sbjct: 525 MIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCK 584
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLF-EQMEQKEFEANDVTFVSLL 180
F V +W++++A Y + ++A+ LF E + + EF N TF S+L
Sbjct: 585 QPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVL 644
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC C + +VK+ K + ++D+ R G ++ + + M K +
Sbjct: 645 PACVRCKVFSDKEGIHGYIVKRGFGKDKYVQ-NALMDMYSRMGRVEISKTIFGRMN-KRD 702
Query: 241 AIIWKTLLSAC 251
+ W T+++ C
Sbjct: 703 IVSWNTMITGC 713
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 124/267 (46%), Gaps = 9/267 (3%)
Query: 6 LVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRM 65
+ +SL +MY K G L +V +P R+ ++W ++IA + E L + LM
Sbjct: 367 VAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFEEWELSLHLFRLMLS 426
Query: 66 VGFRPDKITFVSVISSCSEL-ATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
P T VSV +CS + + G+Q+HA ++ G L ++L++MY+R G ++
Sbjct: 427 ENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNG-DLRTYTNNALVTMYARLGRVN 485
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D+ F + D+V W+++I++ + + EEA+ M + VT S+L ACS
Sbjct: 486 DAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACS 545
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHY---TCVVDLLGRCGYLDEAAALIRNMPVKANA 241
G E + R +E+ T +VD+ C + L+ + V+
Sbjct: 546 QLERLRIGRE---IHCYALRNGDLIENSFVGTALVDMYCNCKQ-PKKGRLVFDGVVRRTV 601
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEIL 268
+W LL+ ++ D A R+ E++
Sbjct: 602 AVWNALLAGYARNEFDDQALRLFVEMI 628
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 103/221 (46%), Gaps = 10/221 (4%)
Query: 35 RNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQI 94
R+ WI L+ + + D + Y M PD F +V+ + + + L G+QI
Sbjct: 293 RSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGKQI 352
Query: 95 HAEVVKAG--ASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHG 152
HA V K G V V +SL++MY +CG L + + F + D V W+SMIA
Sbjct: 353 HAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFE 412
Query: 153 KGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYR-RKPRLEH 211
+ E +++LF M + + T VS+ +ACSH +G V Y R L
Sbjct: 413 EWELSLHLFRLMLSENVDPTSFTLVSVAHACSHV----RGGVRLGKQVHAYTLRNGDLRT 468
Query: 212 YT--CVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
YT +V + R G +++A AL K + + W T++S+
Sbjct: 469 YTNNALVTMYARLGRVNDAKALFGVFDGK-DLVSWNTVISS 508
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 345 bits (884), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 175/445 (39%), Positives = 267/445 (60%), Gaps = 24/445 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+V+ +SL Y + G + + +V LMP RN ++W +IA Q+ + ++ MR
Sbjct: 185 DVVSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMR 244
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+ DK S++S+C+ L L QG+ IH + K+G LD + +++I MY +CGCL+
Sbjct: 245 LENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLE 304
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ + F E + W+ MI HGKGE AI LF++ME++ + +TFV++L AC+
Sbjct: 305 KASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACA 364
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL E+G +F M + KP +EH+ C+VDLLGR G L+EA LI MPV +A +
Sbjct: 365 HSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVL 424
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
L+ AC+ H +T++ +I ++++ + P ++ YVLL+N++ASA RW+ V++ R+ M +R
Sbjct: 425 GALVGACRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDR 484
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
VKK PG S +E ++ V +F G ++HP++ EI L+E+ ++ GYVPDT +HD+
Sbjct: 485 GVKKAPGFSMIESESGVDEFIAGGRAHPQAKEIYAKLDEILETIRSIGYVPDTDGVLHDI 544
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKN 405
D EEKE L +HSEKLAIAF GL+ P K IS++ +
Sbjct: 545 DEEEKENPLYYHSEKLAIAF-----GLLKTKPGETLRISKNLRICRDCHQASKLISKVYD 599
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
REII+RD +RFHHFR G CSC DYW
Sbjct: 600 REIIIRDRNRFHHFRMGGCSCKDYW 624
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 121/281 (43%), Gaps = 33/281 (11%)
Query: 18 KSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVS 77
KSG L +V +P + + T+ G + LA + + Y+ M P+K T+
Sbjct: 66 KSGDLNYALEVFDKIPHPDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPP 125
Query: 78 VISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSD 137
+I +C + +G+QIHA V+K G D +++LI MY L+ + + F D
Sbjct: 126 LIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRD 185
Query: 138 VVLWSSMIAAY---GFHGKGE----------------------------EAINLFEQMEQ 166
VV W+S+I Y GF K EA LF++M
Sbjct: 186 VVSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRL 245
Query: 167 KEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLD 226
+ + S+L AC+ G E+G ++ ++K + + T V+D+ +CG L+
Sbjct: 246 ENVVLDKFVAASMLSACTGLGALEQG-KWIHGYIEKSGIELDSKLATTVIDMYCKCGCLE 304
Query: 227 EAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEI 267
+A+ + +P K + W ++ H + A + +E+
Sbjct: 305 KASEVFNELPQKGIS-SWNCMIGGLAMHGKGEAAIELFKEM 344
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 83/174 (47%), Gaps = 10/174 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G ELD +++ MY K G L + +V +P + + +W +I G A +G E ++ +
Sbjct: 282 GIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELF 341
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQ---QIHAEVVKAGASLDVGVISSLISMY 117
M PD ITFV+V+S+C+ + +G+ Q EV+ G + ++ +
Sbjct: 342 KEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVL--GLKPGMEHFGCMVDLL 399
Query: 118 SRCGCLDDSVKTFLECEYS-DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFE 170
R G L+++ K E + D + +++ A HG E L EQ+ +K E
Sbjct: 400 GRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTE----LGEQIGKKVIE 449
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 90/204 (44%), Gaps = 36/204 (17%)
Query: 79 ISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISM--YSRCGCLDDSVKTFLECEYS 136
+ SCS +A L +Q H+++++ G S D + +I S+ G L+ +++ F + +
Sbjct: 27 LDSCSTMAEL---KQYHSQIIRLGLSADNDAMGRVIKFCAISKSGDLNYALEVFDKIPHP 83
Query: 137 DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC------------- 183
D +++++ Y I ++ +M K N T+ L+ AC
Sbjct: 84 DAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIH 143
Query: 184 SHC---GLKEKGMEFFDLM--------VKKYRR----KPRLE--HYTCVVDLLGRCGYLD 226
+H G G +L+ +++ RR P+ + +T ++ + G++D
Sbjct: 144 AHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGFVD 203
Query: 227 EAAALIRNMPVKANAIIWKTLLSA 250
+A + MP + N++ W +++A
Sbjct: 204 KAREVFELMPER-NSVSWNAMIAA 226
>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 345 bits (884), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 185/450 (41%), Positives = 272/450 (60%), Gaps = 20/450 (4%)
Query: 1 GFELDLVAGSSLAHMYMK-SGSLVEGEKVIRLMPIRNVIAWITLIAGKAQ-NGLAEDVLD 58
GF + GS L +Y K +G +VE KV + +++ W T+I+G +Q L+ED +
Sbjct: 273 GFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAAPDLVLWNTMISGFSQYEDLSEDGIW 332
Query: 59 QYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLD-VGVISSLISMY 117
+ M+ GF PD +FV V S+CS L++ G+Q+HA +K+ + V V ++L++MY
Sbjct: 333 CFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNALVAMY 392
Query: 118 SRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
S+CG + D+ + F ++V +SMIA Y HG E++ LFE M QK+ N +TF+
Sbjct: 393 SKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDIAPNTITFI 452
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
++L AC H G E+G ++F++M +++R +P EHY+C++DLLGR G L EA +I MP
Sbjct: 453 AVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPF 512
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEF 297
+I W TLL AC+ H + ++A + A E L + P +AAPYV+LSN++ASA RW+ +
Sbjct: 513 NPGSIEWATLLGACRKHGNVELAVKAANEFLQLEPYNAAPYVMLSNMYASAARWEEAATV 572
Query: 298 REAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDT 357
+ MRER VKK+PG SW+EI +VH F D SHP EI +Y+ E+ +MK GYVPD
Sbjct: 573 KRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPMIKEIHVYMGEILRKMKQAGYVPDI 632
Query: 358 GADM---HDMDSEEKEYNLKHHSEKLAIAFA----EHTRGLIVML----------PFKYI 400
+ +++ +EKE L +HSEKLA+AF E ++V+ K I
Sbjct: 633 RWALVKDEEVEPDEKERRLLYHSEKLAVAFGLISTEEWVPILVVKNLRICGDCHNAIKLI 692
Query: 401 SEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
S I REI VRD RFH F+ G CSCGDYW
Sbjct: 693 SAITGREITVRDTHRFHCFKEGHCSCGDYW 722
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 145/317 (45%), Gaps = 10/317 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPI---RNVIAWITLIAGKAQNGLAEDVL 57
G++ +++ Y + G L E +V R M R+ ++W +I Q+ + +
Sbjct: 169 GYDCYASVNNAVLACYSRKGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAV 228
Query: 58 DQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMY 117
+ + M G + D T SV+++ + + L G Q H ++K+G + V S LI +Y
Sbjct: 229 ELFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLY 288
Query: 118 SRC-GCLDDSVKTFLECEYSDVVLWSSMIAAYG-FHGKGEEAINLFEQMEQKEFEANDVT 175
S+C G + + K F E D+VLW++MI+ + + E+ I F +M+ F +D +
Sbjct: 289 SKCAGGMVECRKVFEEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCS 348
Query: 176 FVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM 235
FV + ACS+ G + L +K R+ +V + +CG + +A + M
Sbjct: 349 FVCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTM 408
Query: 236 PVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQG 293
P + N + ++++ H + R+ E +L + P +LS + K +G
Sbjct: 409 P-EHNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEG 467
Query: 294 VSEFREAMRERNVKKEP 310
F M+ER + EP
Sbjct: 468 QKYF-NMMKER-FRIEP 482
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 123/251 (49%), Gaps = 10/251 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
++ + ++L + Y K + +V +P +++++ TLIA A G L + +R
Sbjct: 74 NVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAEVR 133
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+ F D T VI +C + +G +Q+H VV G V +++++ YSR G L+
Sbjct: 134 ELRFGLDGFTLSGVIIACGD--DVGLVRQLHCFVVVCGYDCYASVNNAVLACYSRKGFLN 191
Query: 125 DSVKTFLECEYS---DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
++ + F E D V W++MI A G H +G EA+ LF +M ++ + + T S+L
Sbjct: 192 EARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMASVLT 251
Query: 182 ACSHCGLKEKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRC-GYLDEAAALIRNMPVKA 239
A + GM+F +M+K + + + ++DL +C G + E + +
Sbjct: 252 AFTCVKDLVGGMQFHGMMIKSGFHGNSHVG--SGLIDLYSKCAGGMVECRKVFEEI-AAP 308
Query: 240 NAIIWKTLLSA 250
+ ++W T++S
Sbjct: 309 DLVLWNTMISG 319
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 88/216 (40%), Gaps = 38/216 (17%)
Query: 74 TFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLEC 133
TF +++ +C L G+ +HA K+ + + +YS+CG L ++ +F
Sbjct: 11 TFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFDLT 70
Query: 134 EYS-------------------------------DVVLWSSMIAAYGFHGKGEEAINLFE 162
+Y D+V ++++IAAY G+ A+ LF
Sbjct: 71 QYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFA 130
Query: 163 QMEQKEFEANDVTFVSLLYACS-HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGR 221
++ + F + T ++ AC GL + F ++V Y + + V+ R
Sbjct: 131 EVRELRFGLDGFTLSGVIIACGDDVGLVRQLHCF--VVVCGYDCYASVNN--AVLACYSR 186
Query: 222 CGYLDEAAALIRNMPVKA--NAIIWKTLLSACKTHK 255
G+L+EA + R M + + W ++ AC H+
Sbjct: 187 KGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHR 222
>gi|357142905|ref|XP_003572732.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Brachypodium distachyon]
Length = 669
Score = 344 bits (883), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 182/448 (40%), Positives = 274/448 (61%), Gaps = 19/448 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSG--SLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLD 58
G + D +++ Y K G L KV M ++V++W ++IA AQNG++ D L
Sbjct: 223 GLDGDAGVVNTMLDAYAKGGRRDLGAARKVFDTME-KDVVSWNSMIALYAQNGMSADALG 281
Query: 59 QYNLMRMVG--FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISM 116
Y M V + + +T +++ +C+ T+ G+ IH +VV+ G +V V +S++ M
Sbjct: 282 LYRKMLNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRMGLEENVYVGTSVVDM 341
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
YS+CG ++ + K F + + +++ WS+MI YG HG G+EA+++F +M + N +TF
Sbjct: 342 YSKCGRVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDIFNEMCRSGQNPNYITF 401
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
+S+L ACSH GL +KG +++ M K++ +P +EHY C+VDLLGR G LDEA LI+ M
Sbjct: 402 ISVLAACSHAGLLDKGRYWYNAMKKRFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMK 461
Query: 237 VKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSE 296
VK +A IW LLSAC+ HK+ ++A A+ + ++ + YVLLSNI+A A W+ V
Sbjct: 462 VKPDAAIWGALLSACRIHKNVELAEISAKRLFELDATNCGYYVLLSNIYAEAGMWKDVER 521
Query: 297 FREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPD 356
R ++ R ++K PG S +E+K + H F +GDKSHP+ EI YL +L +M+ GYVP+
Sbjct: 522 MRVLVKTRGIEKPPGYSSVELKGRTHLFYVGDKSHPQHKEIYSYLGKLLEKMQEAGYVPN 581
Query: 357 TGADMHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISE 402
TG+ +HD+D EEK L HSEKLAIAFA G ++ + K I++
Sbjct: 582 TGSVLHDLDEEEKASALHIHSEKLAIAFALMNSVPGSVIHVIKNLRVCTDCHTAIKLITK 641
Query: 403 IKNREIIVRDASRFHHFRNGKCSCGDYW 430
I REIIVRD RFHHF++G CSCGDYW
Sbjct: 642 IAQREIIVRDLQRFHHFKDGSCSCGDYW 669
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 142/321 (44%), Gaps = 17/321 (5%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F D + S+L HMY ++ K +P N + + +G +N L L +
Sbjct: 121 FPSDPFSASALLHMYNHCSRPIDARKAFDEIPSPNPVIITAMASGYVRNNLVYPSLALFR 180
Query: 62 LMRMVGFRP--DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ G D+ + S+ + + G +HA VVK G D GV+++++ Y++
Sbjct: 181 KLIASGSATAVDEAAALVAFSASARIPDCGITSSLHALVVKTGLDGDAGVVNTMLDAYAK 240
Query: 120 CGCLD-DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM--EQKEFEANDVTF 176
G D + + + DVV W+SMIA Y +G +A+ L+ +M + N VT
Sbjct: 241 GGRRDLGAARKVFDTMEKDVVSWNSMIALYAQNGMSADALGLYRKMLNVSGSIKCNAVTL 300
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
++L AC+H G + G + +V+ + + T VVD+ +CG ++ A + +
Sbjct: 301 SAILLACAHAGTIQTGKCIHNQVVRMGLEE-NVYVGTSVVDMYSKCGRVEMARKAFQKIK 359
Query: 237 VKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGV 294
K N + W +++ H A I E+ G NP Y+ ++ A+ +
Sbjct: 360 EK-NILSWSAMITGYGMHGHGQEALDIFNEMCRSGQNPN----YITFISVLAACSHAGLL 414
Query: 295 SEFR---EAMRERNVKKEPGV 312
+ R AM++R EPGV
Sbjct: 415 DKGRYWYNAMKKR-FGIEPGV 434
>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g01510
gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 344 bits (883), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 173/440 (39%), Positives = 266/440 (60%), Gaps = 15/440 (3%)
Query: 6 LVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRM 65
L G+SL MY K E E + + +P R ++W LI+G Q GL L + MR
Sbjct: 386 LHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRG 445
Query: 66 VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD 125
R D+ TF +V+ + + A+L G+Q+HA ++++G +V S L+ MY++CG + D
Sbjct: 446 SNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKD 505
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
+V+ F E + V W+++I+A+ +G GE AI F +M + + + V+ + +L ACSH
Sbjct: 506 AVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSH 565
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
CG E+G E+F M Y P+ +HY C++DLLGR G EA L+ MP + + I+W
Sbjct: 566 CGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWS 625
Query: 246 TLLSACKTHKSTDMAGRIAEEILGVNP-QDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
++L+AC+ HK+ +A R AE++ + +DAA YV +SNI+A+A W+ V + ++AMRER
Sbjct: 626 SVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRER 685
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
+KK P SW+E+ +++H F+ D++HP EI + ELT+E++ GY PDT + + D+
Sbjct: 686 GIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDV 745
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTR----GLIVM----------LPFKYISEIKNREIIV 410
D + K +LK+HSE+LA+AFA + ++VM K IS+I REI V
Sbjct: 746 DEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITV 805
Query: 411 RDASRFHHFRNGKCSCGDYW 430
RD SRFHHF G CSCGDYW
Sbjct: 806 RDTSRFHHFSEGVCSCGDYW 825
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 122/256 (47%), Gaps = 14/256 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D G+ + Y K ++E + MP + +++ +I+ +Q E L +
Sbjct: 280 GFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFF 339
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ +GF F +++S + L++L G+Q+H + + A A + V +SL+ MY++C
Sbjct: 340 REMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKC 399
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAY---GFHGKGEEAINLFEQMEQKEFEANDVTFV 177
+++ F V W+++I+ Y G HG G + LF +M A+ TF
Sbjct: 400 EMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAG---LKLFTKMRGSNLRADQSTFA 456
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY---TCVVDLLGRCGYLDEAAALIRN 234
++L A + G + ++ R LE+ + +VD+ +CG + +A +
Sbjct: 457 TVLKASASFASLLLGKQLHAFII----RSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEE 512
Query: 235 MPVKANAIIWKTLLSA 250
MP + NA+ W L+SA
Sbjct: 513 MPDR-NAVSWNALISA 527
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 101/219 (46%), Gaps = 2/219 (0%)
Query: 32 MPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQG 91
+P ++ + + TLI G ++GL + + + MR G +P TF V+ + L G
Sbjct: 210 IPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALG 269
Query: 92 QQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFH 151
QQ+HA V G S D V + ++ YS+ + ++ F E D V ++ +I++Y
Sbjct: 270 QQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQA 329
Query: 152 GKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEH 211
+ E +++ F +M+ F+ + F ++L ++ + G + L
Sbjct: 330 DQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQ-LHCQALLATADSILHV 388
Query: 212 YTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+VD+ +C +EA + +++P + + W L+S
Sbjct: 389 GNSLVDMYAKCEMFEEAELIFKSLPQR-TTVSWTALISG 426
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 87/184 (47%), Gaps = 4/184 (2%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
++ +GS L MY K GS+ + +V MP RN ++W LI+ A NG E + + M
Sbjct: 486 NVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMI 545
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQ-IHAEVVKAGASLDVGVISSLISMYSRCGCL 123
G +PD ++ + V+++CS + QG + A G + + ++ + R G
Sbjct: 546 ESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRF 605
Query: 124 DDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL--L 180
++ K E + D ++WSS++ A H A E++ E + +VS+ +
Sbjct: 606 AEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNI 665
Query: 181 YACS 184
YA +
Sbjct: 666 YAAA 669
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 84/182 (46%), Gaps = 4/182 (2%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM- 63
+ V+ +++ ++K+G + + MP R V+ W L+ A+N ++ + M
Sbjct: 78 NTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMC 137
Query: 64 -RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
PD +TF +++ C++ Q+HA VK G + + S + + S C
Sbjct: 138 RSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEV 197
Query: 123 --LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
LD + F E D V ++++I Y G E+I+LF +M Q + +D TF +L
Sbjct: 198 RRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVL 257
Query: 181 YA 182
A
Sbjct: 258 KA 259
>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 344 bits (883), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 179/445 (40%), Positives = 258/445 (57%), Gaps = 17/445 (3%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E D+V+ + L Y K G + + +P+++++AW ++ G AQNG ++ L+ +
Sbjct: 206 ERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQK 265
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIH--AEVVKAGASLDVGVISSLISMYSRC 120
M+ VG D++T VIS+C++L + I AE G S +V V S+LI MYS+C
Sbjct: 266 MQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKC 325
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G D++ K F + +V +SSMI Y HG+ A+ LF M + E N VTF+ +L
Sbjct: 326 GSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGIL 385
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL E+G + F M K + P +HY C+VDLLGR G L+EA L++ MP++ N
Sbjct: 386 SACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPN 445
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+W LL AC+ H + D+A A E+ + P Y+LLSNI+ASA RW+ VS+ R+
Sbjct: 446 GGVWGALLGACRIHGNPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKV 505
Query: 301 MRERNVKKEPGVSWLEIKN-QVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
+RE+ KK PG SW E KN ++H F GD +HPRS EI L++L ++ GY P+ G+
Sbjct: 506 IREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSHGYKPNLGS 565
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFA----EHTRGLIVMLPFKYI----------SEIKN 405
+D+ +EKE L HSEKLA+A+ E + +M + SEI
Sbjct: 566 APYDLTDDEKERILMSHSEKLALAYGLLCTEAGDTIKIMKNIRICEDCHNVMCAASEITG 625
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
REIIVRD RFHHF NG CSCG++W
Sbjct: 626 REIIVRDNMRFHHFHNGTCSCGNFW 650
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 82/165 (49%), Gaps = 5/165 (3%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
N W +I G A GL + + Y MR G P TF ++ +C + G+Q+H
Sbjct: 106 NPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVH 165
Query: 96 AEVVKAGA-SLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKG 154
A+ + G + D+ V +S+I +Y +CG L + K F E DVV W+ +I AY +G
Sbjct: 166 AQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDM 225
Query: 155 EEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLM 199
E A LF+ + K+ V + +++ + G ++ +E+F M
Sbjct: 226 ESASGLFDDLPLKDM----VAWTAMVTGYAQNGRPKEALEYFQKM 266
>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 614
Score = 344 bits (883), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 176/444 (39%), Positives = 271/444 (61%), Gaps = 16/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ D+ + MYMK GS+ +K+ MP++ +I+W +++G AQNGLA +VL+ Y
Sbjct: 173 GFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELY 232
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M M G PD +T V V+SSC+ L G ++ ++ +G + + + ++LI+MY+RC
Sbjct: 233 RNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARC 292
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L + F +V W+++I YG HG GE A+ LF++M + E + FV +L
Sbjct: 293 GNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVL 352
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL ++G+E+F +M + Y+ +P EHY+C+VDLLGR G L EA LI +MP+K +
Sbjct: 353 SACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPD 412
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+W LL ACK HK+ ++A E ++ + P++ YVLLSNI+++A +GV R
Sbjct: 413 GAVWGALLGACKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIM 472
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+E+ +KK+PG S++E+K +VH F +GD++H +S EI LEEL + + P+ D
Sbjct: 473 MKEKKLKKDPGCSYVELKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQEFGKPEK--D 530
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVM------------LPFKYISEIKNR 406
+ +++ + HSEKLA+AF T G V+ L FK +S+I +R
Sbjct: 531 NREESNKDGFTRVGVHSEKLAVAFGLLNTTTGAEVVIIKNLRICEDCHLFFKMVSKIVHR 590
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
++ VRDA+RFHHFRNG CSC DYW
Sbjct: 591 QLTVRDATRFHHFRNGSCSCKDYW 614
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 144/308 (46%), Gaps = 12/308 (3%)
Query: 10 SSLAHMYMKSGSLVEGEKVI---RLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV 66
+ L MY K GSLV+ + + + + + L++G N D + + M
Sbjct: 79 TGLISMYCK-GSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDAVLLFRQMNEE 137
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
G + +T + +I +C L G +H +K G DV V++ I+MY +CG ++ +
Sbjct: 138 GVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYA 197
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHC 186
K F E ++ W++M++ Y +G + L+ M+ + VT V +L +C++
Sbjct: 198 QKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANL 257
Query: 187 GLKEKGMEF-FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
G + G E F + + P L + ++++ RCG L +A A+ MP + + W
Sbjct: 258 GAQSVGHEVEFKMQASGFTSNPFLNN--ALINMYARCGNLTKAQAVFDGMPERT-LVSWT 314
Query: 246 TLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
++ H ++A ++ +E++ G+ P A +LS + QG+ F+ M +
Sbjct: 315 AIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFK--MMK 372
Query: 304 RNVKKEPG 311
RN + EPG
Sbjct: 373 RNYQLEPG 380
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 4/213 (1%)
Query: 40 WITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVV 99
W T + A+ L Y M G RP+ TF + SC+ L+ G Q H ++
Sbjct: 8 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 67
Query: 100 KAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSD--VVLWSSMIAAYGFHGKGEEA 157
K G + V + LISMY + +D++ K F E +S V ++++++ Y + K +A
Sbjct: 68 KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDA 127
Query: 158 INLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVD 217
+ LF QM ++ N VT + L+ AC E G KY + C +
Sbjct: 128 VLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSS-LHCSTLKYGFDSDVSVVNCFIT 186
Query: 218 LLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+ +CG ++ A L MPVK I W ++S
Sbjct: 187 MYMKCGSVNYAQKLFDEMPVKG-LISWNAMVSG 218
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 344 bits (883), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 175/445 (39%), Positives = 273/445 (61%), Gaps = 16/445 (3%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
FE + GSSL MY K+G + E +V +P R+V++ +I+G AQ GL E+ LD +
Sbjct: 142 FESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFR 201
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
++ G R + +T+ SV+++ S LA L G+Q+H+ V++A V + +SLI MYS+CG
Sbjct: 202 RLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCG 261
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM-EQKEFEANDVTFVSLL 180
L S + F V+ W++M+ Y HG G EA+ LF+ M E+ + + + VTF+++L
Sbjct: 262 SLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVL 321
Query: 181 YACSHCGLKEKGME-FFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
CSH G++++G+E F++++ +K +P +EHY CVVDL GR G ++EA I+ MP +
Sbjct: 322 SGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEP 381
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
A IW +LL AC+ H++ + +A +L + ++A YV+LSN++ASA RW V RE
Sbjct: 382 TAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVRE 441
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M+E+ V KEPG SW+E+ +H F D+SHPR E+ + EL+ ++K GYVP+
Sbjct: 442 LMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIKIKEAGYVPELSC 501
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFA-------------EHTRGLIVMLPF-KYISEIKN 405
++D+D E+KE L+ HSEKLA+AF ++ R + F K++S +
Sbjct: 502 VLYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVRIIKNLRICVDCHNFAKFLSRVYG 561
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
RE+ +RD +RFHH G CSCGDYW
Sbjct: 562 REVSLRDKNRFHHIVGGTCSCGDYW 586
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 152/315 (48%), Gaps = 21/315 (6%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
+E + + L +Y K L + +V+ MP RNV++W +I+G +Q G A + L +
Sbjct: 41 YEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFV 100
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M M G P++ TF +V++SC+ + G+QIH+ V+K + V SSL+ MY++ G
Sbjct: 101 EMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAG 160
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+ ++ + F DVV +++I+ Y G EEA++LF +++++ +N VT+ S+L
Sbjct: 161 KICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLT 220
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC----VVDLLGRCGYLDEAAALIRNMPV 237
A S + G + V + + +L Y ++D+ +CG L + + +MP
Sbjct: 221 ALSGLAALDHGRQ-----VHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPE 275
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRIAEEIL-------GVNPQDAAPYVLLSNIHASAKR 290
+ I W +L H GR A E+ V P +LS
Sbjct: 276 R-TVISWNAMLVGYSKHG----LGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGME 330
Query: 291 WQGVSEFREAMRERN 305
+G+ F E + +++
Sbjct: 331 DRGLEIFYEMVNQKD 345
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 87/171 (50%), Gaps = 5/171 (2%)
Query: 77 SVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYS 136
SV++ C + +GQ++HA ++K V + + LI +Y++C CL D+ + E
Sbjct: 15 SVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPER 74
Query: 137 DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFF 196
+VV W++MI+ Y G EA++LF +M N+ TF ++L +C+ + G +
Sbjct: 75 NVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIH 134
Query: 197 DLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP----VKANAII 243
L++K + + + ++D+ + G + EA + +P V AII
Sbjct: 135 SLVIKT-SFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAII 184
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 344 bits (882), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 170/444 (38%), Positives = 268/444 (60%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +D G SL +Y+ G + + M R++++W +IAG +QNGL ++ ++ +
Sbjct: 340 GLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLF 399
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G +P +I + V +CS+L+ L G+++H +KA + D+ V SS+I MY++
Sbjct: 400 RQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKG 459
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
GC+ S + F DV W+ +IA YG HG+G+EA+ LFE+M + + +D TF +L
Sbjct: 460 GCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGIL 519
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL E G+E+F+ M+ + +P+LEHYTCVVD+LGR G +D+A LI MP +
Sbjct: 520 MACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPD 579
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+ IW +LLS+C+ H + + ++A ++L + P+ YVL+SN+ A + +W V R
Sbjct: 580 SRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGR 639
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M++ ++K+ G SW+E+ +VH F +GD+ P E+ L ++ GY PDTG+
Sbjct: 640 MKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKISSIGYTPDTGSV 699
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNR 406
+HD++ E+K L+ HSEKLAI+F +GL V + K+IS++ NR
Sbjct: 700 LHDLEEEDKIGILRGHSEKLAISFGLLNTAKGLPVRVYKNLRICGDCHNAAKFISKVVNR 759
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
+I+VRD RFHHFR+G CSCGDYW
Sbjct: 760 DIVVRDNKRFHHFRDGICSCGDYW 783
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 144/309 (46%), Gaps = 7/309 (2%)
Query: 5 DLVAGSSLAHMYMKSGSLVEG-EKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
D+ G++L MY K G + E ++V LM + V +W L+ G AQN LD Y M
Sbjct: 242 DVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQM 301
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
G PD T S++ +CS + +L G++IH ++ G ++D + SL+S+Y CG
Sbjct: 302 TDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKP 361
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
+ F E+ +V W+ MIA Y +G +EAINLF QM + ++ + + AC
Sbjct: 362 FAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGAC 421
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
S G E +K + + + ++D+ + G + + + + K +
Sbjct: 422 SQLSALRLGKELHCFALKAHLTEDIFVS-SSIIDMYAKGGCIGLSQRIFDRLREK-DVAS 479
Query: 244 WKTLLSACKTHKSTDMAGRIAEEI--LGVNPQD-AAPYVLLSNIHASAKRWQGVSEFREA 300
W +++ H A + E++ LG+ P D +L++ HA G+ F +
Sbjct: 480 WNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVE-DGLEYFNQM 538
Query: 301 MRERNVKKE 309
+ N++ +
Sbjct: 539 LNLHNIEPK 547
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 127/282 (45%), Gaps = 18/282 (6%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN-LM 63
D V + + MY GS + V + +N+ W +++ +N L ED + ++ L+
Sbjct: 140 DFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELI 199
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
+ +PD T VI +C+ L LG GQ IH K DV V ++LI+MY +CG +
Sbjct: 200 SVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLV 259
Query: 124 DDSVKTFLEC-EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
+++VK + + V W++++ Y + +A++L+ QM + + T SLL A
Sbjct: 260 EEAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLA 319
Query: 183 CS-----HCGLKEKGMEFFD-LMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
CS H G + G + L V + L Y C CG A L M
Sbjct: 320 CSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYIC-------CGKPFAAQVLFDGME 372
Query: 237 VKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAA 276
++ + W +++ + D A + ++L G+ P + A
Sbjct: 373 HRS-LVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIA 413
>gi|414876780|tpg|DAA53911.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 491
Score = 344 bits (882), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 179/444 (40%), Positives = 267/444 (60%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G L+ G++L MY K G L + + + I+W LI G QNG E+ L +
Sbjct: 48 GLTLEDFMGNALIDMYSKCGMLDAAKTIFANKSDKTAISWTALITGCVQNGQHEEALQLF 107
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
MR G PD+ T S+I S S L +G G+Q+HA + +G V S+L+ MY++C
Sbjct: 108 CNMRRAGLSPDRATCSSIIKSSSSLGVIGIGRQLHAYLTTSGHMSSVFSGSALLDMYAKC 167
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
GCLD++++TF E + + W+++I+AY +G+ + AI +F+ M F + VTF+S+L
Sbjct: 168 GCLDEAIRTFNEMPEKNSITWNAVISAYAQYGQAKNAIRMFDSMLHCGFCPDPVTFLSVL 227
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL E+ M++FDLM P EHY+CV+D LGR G D+ ++ MP +A+
Sbjct: 228 AACSHNGLAEECMKYFDLMRYYNSMSPWKEHYSCVIDALGRAGCFDKIQKVLDEMPFEAD 287
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+IW ++L +C+ + + D+A AE + + P DA YV+LSNI+A A W+G + ++
Sbjct: 288 PVIWSSILHSCRIYGNQDLATVAAENLFTMVPTDATAYVILSNIYAKAGNWEGAARVKKI 347
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
MR+R V+KE G SW+EIK +++ F+ D ++P EI LE L EM +GY PDT
Sbjct: 348 MRDRGVRKESGNSWVEIKQKIYMFSSNDHTNPMIDEIKEELERLYEEMDKQGYEPDTSCA 407
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA----EHTRGLIVM----------LPFKYISEIKNR 406
+H +D+++K +LK+HSE+LAIAFA + VM K IS+I NR
Sbjct: 408 LHMVDNKQKLESLKYHSERLAIAFALINTPPGTPITVMKNLSACLDCHAAIKMISKIVNR 467
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
+IIVRD+ RFHHF++G CSCGDYW
Sbjct: 468 DIIVRDSRRFHHFKDGFCSCGDYW 491
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 109/234 (46%), Gaps = 7/234 (2%)
Query: 57 LDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISM 116
L + M+ + F + F S++S L + G+QIHA+++ G +L+ + ++LI M
Sbjct: 3 LQLFREMQTLSFDRHTLPFASLLSVAGALPDIKIGRQIHAQLILLGLTLEDFMGNALIDM 62
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
YS+CG LD + F + W+++I +G+ EEA+ LF M + + T
Sbjct: 63 YSKCGMLDAAKTIFANKSDKTAISWTALITGCVQNGQHEEALQLFCNMRRAGLSPDRATC 122
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
S++ + S G+ G + + + ++D+ +CG LDEA MP
Sbjct: 123 SSIIKSSSSLGVIGIGRQLHAYLTTSGHMSSVFSG-SALLDMYAKCGCLDEAIRTFNEMP 181
Query: 237 VKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASA 288
K N+I W ++SA + A R+ + +L G P P LS + A +
Sbjct: 182 EK-NSITWNAVISAYAQYGQAKNAIRMFDSMLHCGFCPD---PVTFLSVLAACS 231
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 344 bits (882), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 180/449 (40%), Positives = 265/449 (59%), Gaps = 24/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF ++V ++L MY K G + + KV M R++I W T+IA + L
Sbjct: 446 GFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMI 505
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ MR G PD T +S++ CS LA QG++IH + K G DV V + LI MYS+C
Sbjct: 506 SRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKC 565
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L +S + F + DVV W+++I+A G +G+G++A+ F +ME + V FV+++
Sbjct: 566 GSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAII 625
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
+ACSH GL E+G+ +F M K Y+ +PR+EHY CVVDLL R LD+A I +MP+K +
Sbjct: 626 FACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPD 685
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+ IW LLSAC+ T++A R++E I+ +NP D YVL+SNI+A+ +W V R++
Sbjct: 686 SSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRKS 745
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
++ R +KK+PG SW+EI+N+V+ F G K + E++ L L M GY+ +
Sbjct: 746 IKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGLMAKEGYIANLQFV 805
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
+HD+D +EK L HSE+LAIAF GL+ P KYIS
Sbjct: 806 LHDIDEDEKRDILCGHSERLAIAF-----GLLNTKPGTPLQVMKNLRVCEDCHTVTKYIS 860
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+I RE++VRDA+RFH F++G CSCGDYW
Sbjct: 861 KIVQRELLVRDANRFHVFKDGACSCGDYW 889
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 142/288 (49%), Gaps = 17/288 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF DL G++L MY + L + KV MP+R+V++W +LI+G NG + L+ Y
Sbjct: 145 GFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIY 204
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
R +G PD T SV+ +C L ++ +G IH + K G DV V + L+SMY +
Sbjct: 205 YRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKF 264
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
L D + F + D V W++MI Y G EE+I LF +M +F+ + +T S+L
Sbjct: 265 NGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEM-VNQFKPDLLTITSIL 323
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC-------VVDLLGRCGYLDEAAALIR 233
AC H G E G D M+ Y C ++++ +CG L + +
Sbjct: 324 QACGHLGDLEFGKYVHDYMIT--------SGYECDTTASNILINMYAKCGNLLASQEVFS 375
Query: 234 NMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLL 281
M K +++ W ++++ + S D A ++ + + D+ YV+L
Sbjct: 376 GMKCK-DSVSWNSMINVYIQNGSFDEAMKLFKMMKTDVKPDSVTYVML 422
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 157/314 (50%), Gaps = 7/314 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+E D A + L +MY K G+L+ ++V M ++ ++W ++I QNG ++ + +
Sbjct: 346 GYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF 405
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+M+ +PD +T+V ++S ++L L G+++H ++ K G + ++ V ++L+ MY++C
Sbjct: 406 KMMK-TDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKC 464
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + DS+K F + D++ W+++IA+ + + +M + + T +S+L
Sbjct: 465 GEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSIL 524
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
CS K +G E + K + + ++++ +CG L + + + M K +
Sbjct: 525 PVCSLLAAKRQGKEIHGCIF-KLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTK-D 582
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
+ W L+SAC + A R E+ G+ P A ++ S +G++ F
Sbjct: 583 VVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFH 642
Query: 299 EAMRERNVKKEPGV 312
+++ K EP +
Sbjct: 643 RM--KKDYKIEPRI 654
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 83/166 (50%), Gaps = 1/166 (0%)
Query: 28 VIRLM-PIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELA 86
V RL P NV W ++I NGL + L Y+ + + +PD TF SVI++C+ L
Sbjct: 70 VFRLASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLL 129
Query: 87 TLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIA 146
+ IH V+ G D+ + ++LI MY R LD + K F E DVV W+S+I+
Sbjct: 130 DFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLIS 189
Query: 147 AYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKG 192
Y +G EA+ ++ + + T S+L AC G E+G
Sbjct: 190 GYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEG 235
>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
Length = 852
Score = 344 bits (882), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 174/455 (38%), Positives = 262/455 (57%), Gaps = 30/455 (6%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPI--RNVIAWITLIAGKAQNGLAEDVLD 58
G + DL+ ++L MY K S + +P+ RNV+ W +I G AQ G + D L
Sbjct: 403 GEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALK 462
Query: 59 QYNLM--RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGA--SLDVGVISSLI 114
+ M G P+ T ++ +C+ LA + G+QIHA V++ S V + LI
Sbjct: 463 LFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLI 522
Query: 115 SMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDV 174
+MYS+CG +D + F + W+SM+ YG HG+G EA+++F++M + F +D+
Sbjct: 523 NMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDI 582
Query: 175 TFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRN 234
TF+ +LYACSHCG+ ++G+ +FD M Y PR EHY +DLL R G LD+A +++
Sbjct: 583 TFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKD 642
Query: 235 MPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGV 294
MP++ A++W LLSAC+ H + ++A +++ +N ++ Y L+SNI+A+A RW+ V
Sbjct: 643 MPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDV 702
Query: 295 SEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYV 354
+ R M++ +KK PG SW++ + F +GD+SHP S +I LE L +K GYV
Sbjct: 703 ARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYV 762
Query: 355 PDTGADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP------------------ 396
P+T +HD+D EEK L HSEKLA+A+ GL+ P
Sbjct: 763 PETNFALHDVDEEEKNNLLVEHSEKLALAY-----GLLTTFPGCPIRITKNLRVCGDCHS 817
Query: 397 -FKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
F YIS+I + EI+VRD SRFHHF+NG CSCG YW
Sbjct: 818 AFTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 852
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 159/350 (45%), Gaps = 61/350 (17%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKV---IRLMPIRNVIAWITLIAGKAQNGLAEDVL 57
GFE ++ ++L MY + GSL E + I I +VI+W ++++ ++ A L
Sbjct: 147 GFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTAL 206
Query: 58 DQYNLMRMV------GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVIS 111
D ++ M ++ R D I+ V+++ +C L + Q +++H ++ G LDV V +
Sbjct: 207 DLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGN 266
Query: 112 SLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAY----------------------- 148
+LI Y++CG ++++VK F E+ DVV W++M+A Y
Sbjct: 267 ALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPL 326
Query: 149 ----------GFHGKG--EEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFF 196
G+ +G EA+N+F QM N VT +S+L AC+ G +GME
Sbjct: 327 DMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIH 386
Query: 197 DLMVKKYR---------RKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA-NAIIWKT 246
+K L Y ++D+ +C A ++ ++P++ N + W
Sbjct: 387 AYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTV 446
Query: 247 LLSACKTHKSTDMAGRIAEEILGVNPQDAAPY------VLLSNIHASAKR 290
++ + ++ A ++ E++ P AP +L++ H +A R
Sbjct: 447 MIGGHAQYGDSNDALKLFVEMIS-EPYGVAPNAYTISCILMACAHLAAIR 495
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 111/252 (44%), Gaps = 13/252 (5%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G+ + Y+ G+ V+ + + W LI + G + ++ M G
Sbjct: 54 GTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGT 113
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
R D T V+ +C EL + G H + G +V + ++L++MYSRCG L+++
Sbjct: 114 RLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASM 173
Query: 129 TFLECE---YSDVVLWSSMIAAYGFHGKGEEAINLFEQM-----EQKEFEANDVTFVSLL 180
F E DV+ W+S+++A+ A++LF +M E+ E +D+ +S++
Sbjct: 174 IFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI--ISIV 231
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY--TCVVDLLGRCGYLDEAAALIRNMPVK 238
CG + + ++ R L+ + ++D +CG ++ A + M K
Sbjct: 232 NILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFK 291
Query: 239 ANAIIWKTLLSA 250
+ + W +++
Sbjct: 292 -DVVSWNAMVAG 302
>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 344 bits (882), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 177/451 (39%), Positives = 268/451 (59%), Gaps = 26/451 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIR--NVIAWITLIAGKAQNGLAEDVLD 58
GF D + ++L HMY+ SL + +V MP R N ++W +IA Q+ +
Sbjct: 124 GFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFA 183
Query: 59 QYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
++ MR+ DK S++S+C+ L L QG+ IH + K+G LD + +++I MY
Sbjct: 184 LFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYC 243
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+CGCL+ + + F E + W+ MI HGKGE AI LF++ME++ + +TFV+
Sbjct: 244 KCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVN 303
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+L AC+H GL E+G +F M + KP +EH+ C+VDLLGR G L+EA LI MPV
Sbjct: 304 VLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVN 363
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
+A + L+ AC+ H +T++ +I ++++ + P ++ YVLL+N++ASA RW+ V++ R
Sbjct: 364 PDAGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVR 423
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
+ M +R VKK PG S +E ++ V +F G ++HP++ EI L+E+ ++ GYVPDT
Sbjct: 424 KLMNDRGVKKAPGFSMIESESGVDEFIAGGRAHPQAKEIYAKLDEILETIRSIGYVPDTD 483
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKY 399
+HD+D EEKE L +HSEKLAIAF GL+ P K
Sbjct: 484 GVLHDIDEEEKENPLYYHSEKLAIAF-----GLLKTKPGETLRISKNLRICRDCHQASKL 538
Query: 400 ISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
IS++ +REII+RD +RFHHFR G CSC DYW
Sbjct: 539 ISKVYDREIIIRDRNRFHHFRMGGCSCKDYW 569
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 106/218 (48%), Gaps = 4/218 (1%)
Query: 52 LAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVIS 111
LA + + Y+ M P+K T+ +I +C + +G+QIHA V+K G D ++
Sbjct: 74 LARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLN 133
Query: 112 SLISMYSRCGCLDDSVKTFLECEYSD--VVLWSSMIAAYGFHGKGEEAINLFEQMEQKEF 169
+LI MY L+ + + F D V W++MIAAY + EA LF++M +
Sbjct: 134 NLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENV 193
Query: 170 EANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAA 229
+ S+L AC+ G E+G ++ ++K + + T V+D+ +CG L++A+
Sbjct: 194 VLDKFVAASMLSACTGLGALEQG-KWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKAS 252
Query: 230 ALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEI 267
+ +P K + W ++ H + A + +E+
Sbjct: 253 EVFNELPQKGIS-SWNCMIGGLAMHGKGEAAIELFKEM 289
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 344 bits (882), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 175/445 (39%), Positives = 273/445 (61%), Gaps = 16/445 (3%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
FE + GSSL MY K+G + E +V +P R+V++ +I+G AQ GL E+ LD +
Sbjct: 609 FESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFR 668
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
++ G R + +T+ SV+++ S LA L G+Q+H+ V++A V + +SLI MYS+CG
Sbjct: 669 RLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCG 728
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM-EQKEFEANDVTFVSLL 180
L S + F V+ W++M+ Y HG G EA+ LF+ M E+ + + + VTF+++L
Sbjct: 729 SLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVL 788
Query: 181 YACSHCGLKEKGME-FFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
CSH G++++G+E F++++ +K +P +EHY CVVDL GR G ++EA I+ MP +
Sbjct: 789 SGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEP 848
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
A IW +LL AC+ H++ + +A +L + ++A YV+LSN++ASA RW V RE
Sbjct: 849 TAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVRE 908
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M+E+ V KEPG SW+E+ +H F D+SHPR E+ + EL+ ++K GYVP+
Sbjct: 909 LMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIKIKEAGYVPELSC 968
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFA-------------EHTRGLIVMLPF-KYISEIKN 405
++D+D E+KE L+ HSEKLA+AF ++ R + F K++S +
Sbjct: 969 VLYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVRIIKNLRICVDCHNFAKFLSRVYG 1028
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
RE+ +RD +RFHH G CSCGDYW
Sbjct: 1029 REVSLRDKNRFHHIVGGTCSCGDYW 1053
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 152/315 (48%), Gaps = 21/315 (6%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
+E + + L +Y K L + +V+ MP RNV++W +I+G +Q G A + L +
Sbjct: 508 YEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFV 567
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M M G P++ TF +V++SC+ + G+QIH+ V+K + V SSL+ MY++ G
Sbjct: 568 EMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAG 627
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+ ++ + F DVV +++I+ Y G EEA++LF +++++ +N VT+ S+L
Sbjct: 628 KICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLT 687
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC----VVDLLGRCGYLDEAAALIRNMPV 237
A S + G + V + + +L Y ++D+ +CG L + + +MP
Sbjct: 688 ALSGLAALDHGRQ-----VHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPE 742
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRIAEEIL-------GVNPQDAAPYVLLSNIHASAKR 290
+ I W +L H GR A E+ V P +LS
Sbjct: 743 RT-VISWNAMLVGYSKHG----LGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGME 797
Query: 291 WQGVSEFREAMRERN 305
+G+ F E + +++
Sbjct: 798 DRGLEIFYEMVNQKD 812
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 87/171 (50%), Gaps = 5/171 (2%)
Query: 77 SVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYS 136
SV++ C + +GQ++HA ++K V + + LI +Y++C CL D+ + E
Sbjct: 482 SVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPER 541
Query: 137 DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFF 196
+VV W++MI+ Y G EA++LF +M N+ TF ++L +C+ + G +
Sbjct: 542 NVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIH 601
Query: 197 DLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP----VKANAII 243
L++K + + + ++D+ + G + EA + +P V AII
Sbjct: 602 SLVIKT-SFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAII 651
>gi|356565531|ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Glycine max]
Length = 628
Score = 344 bits (882), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 182/454 (40%), Positives = 268/454 (59%), Gaps = 31/454 (6%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN- 61
E LV+ +++ Y K G L E + M +++V+ W +I G AQ+G + L +
Sbjct: 180 ERSLVSYTAMLTCYAKHGMLPEARVLFEGMGMKDVVCWNVMIDGYAQHGCPNEALVFFRK 239
Query: 62 ------LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLIS 115
RP++IT V+V+SSC ++ L G+ +H+ V G ++V V ++L+
Sbjct: 240 MMMMMGGNGNGKVRPNEITVVAVLSSCGQVGALECGKWVHSYVENNGIKVNVRVGTALVD 299
Query: 116 MYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVT 175
MY +CG L+D+ K F E DVV W+SMI YG HG +EA+ LF +M + +D+T
Sbjct: 300 MYCKCGSLEDARKVFDVMEGKDVVAWNSMIMGYGIHGFSDEALQLFHEMCCIGVKPSDIT 359
Query: 176 FVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM 235
FV++L AC+H GL KG E FD M Y +P++EHY C+V+LLGR G + EA L+R+M
Sbjct: 360 FVAVLTACAHAGLVSKGWEVFDSMKDGYGMEPKVEHYGCMVNLLGRAGRMQEAYDLVRSM 419
Query: 236 PVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVS 295
V+ + ++W TLL AC+ H + + IAE ++ + YVLLSN++A+A+ W GV+
Sbjct: 420 EVEPDPVLWGTLLWACRIHSNVSLGEEIAEILVSNGLASSGTYVLLSNMYAAARNWVGVA 479
Query: 296 EFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVP 355
+ R M+ V+KEPG S +E+KN+VH+F GD+ HPRS +I LE++ +K R Y P
Sbjct: 480 KVRSMMKGSGVEKEPGCSSIEVKNRVHEFVAGDRRHPRSKDIYSMLEKMNGWLKERHYTP 539
Query: 356 DTGADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP------------------- 396
T A +HD+ +EKE +L+ HSEKLA+AF GLI P
Sbjct: 540 KTDAVLHDIGEQEKEQSLEVHSEKLALAF-----GLISTSPGAAIKIVKNLRVCLDCHAV 594
Query: 397 FKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
K +S+I R+II+RD +RFHHF NG CSC DYW
Sbjct: 595 MKIMSKISGRKIIMRDRNRFHHFENGSCSCRDYW 628
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 128/320 (40%), Gaps = 49/320 (15%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y G L + P NV W +I A L L Y+ M +P+ T
Sbjct: 65 YASLGHLHHSVTLFHRTPNPNVFLWTHIINAHAHFDLFHHALSYYSQMLTHPIQPNAFTL 124
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTF----- 130
S++ +C TL + +H+ +K G S + V + L+ Y+R G + + K F
Sbjct: 125 SSLLKAC----TLHPARAVHSHAIKFGLSSHLYVSTGLVDAYARGGDVASAQKLFDAMPE 180
Query: 131 ---------LEC-----------------EYSDVVLWSSMIAAYGFHGKGEEAINLFEQ- 163
L C DVV W+ MI Y HG EA+ F +
Sbjct: 181 RSLVSYTAMLTCYAKHGMLPEARVLFEGMGMKDVVCWNVMIDGYAQHGCPNEALVFFRKM 240
Query: 164 ------MEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVD 217
+ N++T V++L +C G E G ++ V+ K + T +VD
Sbjct: 241 MMMMGGNGNGKVRPNEITVVAVLSSCGQVGALECG-KWVHSYVENNGIKVNVRVGTALVD 299
Query: 218 LLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDA 275
+ +CG L++A + M K + + W +++ H +D A ++ E+ +GV P D
Sbjct: 300 MYCKCGSLEDARKVFDVMEGK-DVVAWNSMIMGYGIHGFSDEALQLFHEMCCIGVKPSDI 358
Query: 276 A-PYVLLSNIHAS--AKRWQ 292
VL + HA +K W+
Sbjct: 359 TFVAVLTACAHAGLVSKGWE 378
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 88/162 (54%), Gaps = 7/162 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G ++++ G++L MY K GSL + KV +M ++V+AW ++I G +G +++ L +
Sbjct: 286 GIKVNVRVGTALVDMYCKCGSLEDARKVFDVMEGKDVVAWNSMIMGYGIHGFSDEALQLF 345
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV--ISSLISMYS 118
+ M +G +P ITFV+V+++C+ + +G ++ + +K G ++ V ++++
Sbjct: 346 HEMCCIGVKPSDITFVAVLTACAHAGLVSKGWEVF-DSMKDGYGMEPKVEHYGCMVNLLG 404
Query: 119 RCGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGK---GEE 156
R G + ++ E D VLW +++ A H GEE
Sbjct: 405 RAGRMQEAYDLVRSMEVEPDPVLWGTLLWACRIHSNVSLGEE 446
>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 705
Score = 344 bits (882), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 175/441 (39%), Positives = 273/441 (61%), Gaps = 16/441 (3%)
Query: 6 LVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRM 65
++A +++ + G + + +V M RN +W T+I +NG + LD + LM+
Sbjct: 265 VIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQK 324
Query: 66 VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD 125
G RP T +S++S C+ LA+L G+Q+HA++V+ +DV V S L++MY +CG L
Sbjct: 325 QGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVK 384
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQME-QKEFEANDVTFVSLLYACS 184
S F D+++W+S+I+ Y HG GEEA+ +F +M + N+VTFV+ L ACS
Sbjct: 385 SKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACS 444
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
+ G+ E+G++ ++ M + KP HY C+VD+LGR G +EA +I +M V+ +A +W
Sbjct: 445 YAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVW 504
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
+LL AC+TH D+A A++++ + P+++ Y+LLSN++AS RW V+E R+ M+ R
Sbjct: 505 GSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTR 564
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGD-KSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHD 363
V+K PG SW E++N+VH FT G SHP I L+EL ++ GY PD +HD
Sbjct: 565 LVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHD 624
Query: 364 MDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNREII 409
+D EEK +LK+HSE+LA+A+A + + G+ + + K IS++K REII
Sbjct: 625 VDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREII 684
Query: 410 VRDASRFHHFRNGKCSCGDYW 430
+RDA+RFHHFRNG+CSC DYW
Sbjct: 685 LRDANRFHHFRNGECSCKDYW 705
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 81/155 (52%), Gaps = 3/155 (1%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F++D+ S L MY+K G LV+ + + P +++I W ++I+G A +GL E+ L +
Sbjct: 362 FDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFC 421
Query: 62 LMRMVG-FRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSR 119
M + G +P+++TFV+ +S+CS + +G +I+ + G + ++ M R
Sbjct: 422 EMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGR 481
Query: 120 CGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGK 153
G +++++ D +W S++ A H +
Sbjct: 482 AGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQ 516
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 116/244 (47%), Gaps = 18/244 (7%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
++++ + L YMK+G + E KV LMP RNV++W L+ G NG + + M
Sbjct: 78 NIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMP 137
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+K+++ ++ + + +++ + D +S+I + G +D
Sbjct: 138 ----EKNKVSWTVMLIGFLQDGRIDDACKLYEMI----PDKDNIARTSMIHGLCKEGRVD 189
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
++ + F E V+ W++M+ YG + + ++A +F+ M +K +V++ S+L
Sbjct: 190 EAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEK----TEVSWTSMLMGYV 245
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
G E E F++M KP + ++ LG+ G + +A + +M + +A W
Sbjct: 246 QNGRIEDAEELFEVMPV----KPVIA-CNAMISGLGQKGEIAKARRVFDSMKERNDA-SW 299
Query: 245 KTLL 248
+T++
Sbjct: 300 QTVI 303
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 115/254 (45%), Gaps = 18/254 (7%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D +A +S+ H K G + E ++ M R+VI W T++ G QN +D +++M
Sbjct: 171 DNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVM- 229
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIH--AEVVKAGASLDVGVISSLISMYSRCGC 122
P+K + +S S L Q +I E+ + V +++IS + G
Sbjct: 230 -----PEK----TEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGE 280
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
+ + + F + + W ++I + +G EA++LF M+++ T +S+L
Sbjct: 281 IAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSV 340
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHY--TCVVDLLGRCGYLDEAAALIRNMPVKAN 240
C+ G + +V R + ++ Y + ++ + +CG L ++ + P K +
Sbjct: 341 CASLASLHHGKQVHAQLV---RCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSK-D 396
Query: 241 AIIWKTLLSACKTH 254
I+W +++S +H
Sbjct: 397 IIMWNSIISGYASH 410
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 83/195 (42%), Gaps = 17/195 (8%)
Query: 114 ISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEAND 173
I+ SR G + ++ K F C+ + W+SM+A Y + +A LF++M + N
Sbjct: 24 ITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDR----NI 79
Query: 174 VTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIR 233
+++ L+ G ++ + FDLM ++ + +T +V G +D A +L
Sbjct: 80 ISWNGLVSGYMKNGEIDEARKVFDLMPER-----NVVSWTALVKGYVHNGKVDVAESLFW 134
Query: 234 NMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAK--RW 291
MP K N + W +L D A ++ E I D S IH K R
Sbjct: 135 KMPEK-NKVSWTVMLIGFLQDGRIDDACKLYEMI-----PDKDNIARTSMIHGLCKEGRV 188
Query: 292 QGVSEFREAMRERNV 306
E + M ER+V
Sbjct: 189 DEAREIFDEMSERSV 203
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 76/160 (47%), Gaps = 12/160 (7%)
Query: 106 DVGVIS--SLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQ 163
D +IS L+S Y + G +D++ K F +VV W++++ Y +GK + A +LF +
Sbjct: 76 DRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWK 135
Query: 164 MEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCG 223
M +K N V++ +L G + + ++++ K T ++ L + G
Sbjct: 136 MPEK----NKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIA-----RTSMIHGLCKEG 186
Query: 224 YLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRI 263
+DEA + M ++ I W T+++ + D A +I
Sbjct: 187 RVDEAREIFDEMSERS-VITWTTMVTGYGQNNRVDDARKI 225
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 344 bits (882), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 179/449 (39%), Positives = 265/449 (59%), Gaps = 24/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF ++V ++L MY K G + + KV M R++I W T+IA + L
Sbjct: 505 GFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMI 564
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ MR G PD T +S++ CS LA QG++IH + K G DV V + LI MYS+C
Sbjct: 565 SRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKC 624
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L +S + F + DVV W+++I+A G +G+G++A+ F +ME + V FV+++
Sbjct: 625 GSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAII 684
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
+ACSH GL E+G+ +F M K Y+ +PR+EHY CVVDLL R LD+A I +MP+K +
Sbjct: 685 FACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPD 744
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+ IW LLSAC+ T++A R++E I+ +NP D YVL+SN++A+ +W V R++
Sbjct: 745 SSIWGALLSACRMSGDTEIAQRVSERIIELNPDDTGYYVLVSNVYAALGKWDQVRSIRKS 804
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
++ R +KK+PG SW+EI+N+V+ F G K + E++ L L M GY+ +
Sbjct: 805 IKARGLKKDPGCSWMEIQNKVYVFGTGTKFSEQFEEVNKLLGMLAGLMAKEGYIANLQFV 864
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
+HD+D +EK L HSE+LAIAF GL+ P KYIS
Sbjct: 865 LHDIDEDEKRDILCGHSERLAIAF-----GLLNTKPGTPLQVMKNLRVCEDCHTVTKYIS 919
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+I RE++VRDA+RFH F++G CSCGDYW
Sbjct: 920 KIXQRELLVRDANRFHVFKDGACSCGDYW 948
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 142/288 (49%), Gaps = 17/288 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF DL G++L MY + L + KV MP+R+V++W +LI+G NG + L+ Y
Sbjct: 204 GFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIY 263
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
R +G PD T SV+ +C L ++ +G IH + K G DV V + L+SMY +
Sbjct: 264 YRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKF 323
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
L D + F + D V W++MI Y G EE+I LF +M +F+ + +T S+L
Sbjct: 324 NGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVN-QFKPDLLTITSIL 382
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC-------VVDLLGRCGYLDEAAALIR 233
AC H G E G D M+ Y C ++++ +CG L + +
Sbjct: 383 QACGHLGDLEFGKYVHDYMIT--------SGYECDTTASNILINMYAKCGNLLASQEVFS 434
Query: 234 NMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLL 281
M K +++ W ++++ + S D A ++ + + D+ YV+L
Sbjct: 435 GMKCK-DSVSWNSMINVYIQNGSFDEAMKLFKMMKTDVKPDSVTYVML 481
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 157/314 (50%), Gaps = 7/314 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+E D A + L +MY K G+L+ ++V M ++ ++W ++I QNG ++ + +
Sbjct: 405 GYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF 464
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+M+ +PD +T+V ++S ++L L G+++H ++ K G + ++ V ++L+ MY++C
Sbjct: 465 KMMK-TDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKC 523
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + DS+K F + D++ W+++IA+ + + +M + + T +S+L
Sbjct: 524 GEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSIL 583
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
CS K +G E + K + + ++++ +CG L + + + M K +
Sbjct: 584 PVCSLLAAKRQGKEIHGCIF-KLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTK-D 641
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
+ W L+SAC + A R E+ G+ P A ++ S +G++ F
Sbjct: 642 VVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFH 701
Query: 299 EAMRERNVKKEPGV 312
+++ K EP +
Sbjct: 702 RM--KKDYKIEPRI 713
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 83/166 (50%), Gaps = 1/166 (0%)
Query: 28 VIRLM-PIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELA 86
V RL P NV W ++I NGL + L Y+ + + +PD TF SVI++C+ L
Sbjct: 129 VFRLASPSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLL 188
Query: 87 TLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIA 146
+ IH V+ G D+ + ++LI MY R LD + K F E DVV W+S+I+
Sbjct: 189 DFEMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLIS 248
Query: 147 AYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKG 192
Y +G EA+ ++ + + T S+L AC G E+G
Sbjct: 249 GYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEG 294
>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
Length = 745
Score = 343 bits (881), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 174/455 (38%), Positives = 262/455 (57%), Gaps = 30/455 (6%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPI--RNVIAWITLIAGKAQNGLAEDVLD 58
G + DL+ ++L MY K S + +P+ RNV+ W +I G AQ G + D L
Sbjct: 296 GEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALK 355
Query: 59 QYNLM--RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGA--SLDVGVISSLI 114
+ M G P+ T ++ +C+ LA + G+QIHA V++ S V + LI
Sbjct: 356 LFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLI 415
Query: 115 SMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDV 174
+MYS+CG +D + F + W+SM+ YG HG+G EA+++F++M + F +D+
Sbjct: 416 NMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDI 475
Query: 175 TFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRN 234
TF+ +LYACSHCG+ ++G+ +FD M Y PR EHY +DLL R G LD+A +++
Sbjct: 476 TFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKD 535
Query: 235 MPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGV 294
MP++ A++W LLSAC+ H + ++A +++ +N ++ Y L+SNI+A+A RW+ V
Sbjct: 536 MPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDV 595
Query: 295 SEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYV 354
+ R M++ +KK PG SW++ + F +GD+SHP S +I LE L +K GYV
Sbjct: 596 ARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYV 655
Query: 355 PDTGADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP------------------ 396
P+T +HD+D EEK L HSEKLA+A+ GL+ P
Sbjct: 656 PETNFALHDVDEEEKNNLLVEHSEKLALAY-----GLLTTFPGCPIRITKNLRVCGDCHS 710
Query: 397 -FKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
F YIS+I + EI+VRD SRFHHF+NG CSCG YW
Sbjct: 711 AFTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 745
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 159/350 (45%), Gaps = 61/350 (17%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKV---IRLMPIRNVIAWITLIAGKAQNGLAEDVL 57
GFE ++ ++L MY + GSL E + I I +VI+W ++++ ++ A L
Sbjct: 40 GFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTAL 99
Query: 58 DQYNLMRMV------GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVIS 111
D ++ M ++ R D I+ V+++ +C L + Q +++H ++ G LDV V +
Sbjct: 100 DLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGN 159
Query: 112 SLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAY----------------------- 148
+LI Y++CG ++++VK F E+ DVV W++M+A Y
Sbjct: 160 ALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPL 219
Query: 149 ----------GFHGKG--EEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFF 196
G+ +G EA+N+F QM N VT +S+L AC+ G +GME
Sbjct: 220 DMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIH 279
Query: 197 DLMVKKYR---------RKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA-NAIIWKT 246
+K L Y ++D+ +C A ++ ++P++ N + W
Sbjct: 280 AYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTV 339
Query: 247 LLSACKTHKSTDMAGRIAEEILGVNPQDAAPY------VLLSNIHASAKR 290
++ + ++ A ++ E++ P AP +L++ H +A R
Sbjct: 340 MIGGHAQYGDSNDALKLFVEMIS-EPYGVAPNAYTISCILMACAHLAAIR 388
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 92/198 (46%), Gaps = 13/198 (6%)
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M G R D T V+ +C EL + G H + G +V + ++L++MYSRCG
Sbjct: 1 MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60
Query: 123 LDDSVKTFLECE---YSDVVLWSSMIAAYGFHGKGEEAINLFEQM-----EQKEFEANDV 174
L+++ F E DV+ W+S+++A+ A++LF +M E+ E +D+
Sbjct: 61 LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 120
Query: 175 TFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY--TCVVDLLGRCGYLDEAAALI 232
+S++ CG + + ++ R L+ + ++D +CG ++ A +
Sbjct: 121 --ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVF 178
Query: 233 RNMPVKANAIIWKTLLSA 250
M K + + W +++
Sbjct: 179 NMMEFK-DVVSWNAMVAG 195
>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 647
Score = 343 bits (881), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 179/444 (40%), Positives = 268/444 (60%), Gaps = 15/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G ++ GSSL MY + G L E V + +N ++W LIAG A+ G E+ L +
Sbjct: 205 GCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKGEGEEALALF 264
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G+RP + T+ +++SSCS + L QG+ +HA ++K+ L V ++L+ MY++
Sbjct: 265 VRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKS 324
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + D+ K F + DVV +SM+ Y HG G+EA F++M + E ND+TF+S+L
Sbjct: 325 GSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDITFLSVL 384
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH L ++G +F LM +KY +P++ HY +VDLLGR G LD+A + I MP++
Sbjct: 385 TACSHARLLDEGKHYFGLM-RKYNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMPIEPT 443
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
IW LL A K HK+T+M A+ + ++P + LL+NI+ASA RW+ V++ R+
Sbjct: 444 VAIWGALLGASKMHKNTEMGAYAAQRVFELDPSYPGTHTLLANIYASAGRWEDVAKVRKI 503
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M++ VKKEP SW+E++N VH F D +HP+ +I E+L ++K GYVPDT
Sbjct: 504 MKDSGVKKEPACSWVEVENSVHVFVANDVAHPQKEKIHKMWEKLNQKIKEIGYVPDTSHV 563
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNR 406
+ +D +EKE NL++HSEKLA++FA G + + KY+S + R
Sbjct: 564 LLFVDQQEKELNLQYHSEKLALSFALLNTPPGSTIRIMKNIRVCGDCHSAIKYVSLVVKR 623
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EIIVRD +RFHHF +G CSCGDYW
Sbjct: 624 EIIVRDTNRFHHFCDGFCSCGDYW 647
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 162/314 (51%), Gaps = 7/314 (2%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F+ DLV +SL MY + GSL ++ MP R++++W ++I G AQN A D L +
Sbjct: 105 FKHDLVIQNSLLFMYARCGSLEGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFP 164
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M G P++ T S++ C +A+ G+QIHA K G +V V SSL+ MY+RCG
Sbjct: 165 RMLSDGAEPNEFTLSSLVKCCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCG 224
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
L +++ F + + V W+++IA Y G+GEEA+ LF +M+++ + + T+ +LL
Sbjct: 225 YLGEAMLVFDKLGCKNEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLS 284
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
+CS G E+G ++K ++ T ++ + + G + +A + + VK +
Sbjct: 285 SCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNT-LLHMYAKSGSIRDAEKVFDKL-VKVDV 342
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
+ ++L H A + +E++ G+ P D +L+ + A+ +
Sbjct: 343 VSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTAC-SHARLLDEGKHYFG 401
Query: 300 AMRERNVKKEPGVS 313
MR+ N+ EP VS
Sbjct: 402 LMRKYNI--EPKVS 413
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 96/190 (50%), Gaps = 2/190 (1%)
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+L+ PD+ + +++ C++L L +G+ +H V+ + D+ + +SL+ MY+RC
Sbjct: 63 DLIDCGSLEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARC 122
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L+ + + F E + D+V W+SMI Y + + +A+ LF +M E N+ T SL+
Sbjct: 123 GSLEGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLV 182
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
C + G + KY + + +VD+ RCGYL EA + + K N
Sbjct: 183 KCCGYMASYNCGRQ-IHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCK-N 240
Query: 241 AIIWKTLLSA 250
+ W L++
Sbjct: 241 EVSWNALIAG 250
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 343 bits (881), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 171/443 (38%), Positives = 275/443 (62%), Gaps = 15/443 (3%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
LD++A ++L Y+K G + ++ + +R+V+AW +I G QNG +D ++ +
Sbjct: 343 NLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRS 402
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M G +P+ T +++S S LA+L G+QIHA ++G + V V ++LI+MY++ G
Sbjct: 403 MIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSVSVSNALITMYAKSGS 462
Query: 123 LDDSVKTFLECEYS-DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
++D+ F + D + W+SMI A HG GEEA+ LFE+M + + + +T+V +L
Sbjct: 463 INDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENGIKPDHITYVGVLS 522
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
AC+H GL E+G +++LM ++ P HY C++DL GR G L EA A I NMP++ +
Sbjct: 523 ACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMIDLFGRAGLLQEAHAFIENMPIEPDV 582
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
I W +LL++CK HK+ ++A AE +L + P+++ Y L+N++++ +W+ + R++M
Sbjct: 583 IAWGSLLASCKVHKNVELAEVAAERLLLIEPENSGAYSALANVYSACGQWENAANIRKSM 642
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
+++ VKK+ G SW++IKN+VH F + D HP+ I + ++ E+K G+VPDT + +
Sbjct: 643 KDKGVKKDQGFSWVQIKNKVHIFGVDDGLHPQRDAIYEMMAKIWKEIKKMGFVPDTESVL 702
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFA-----EHTRGLIVM---------LPFKYISEIKNRE 407
HD++ E KE L HHSEKLAIAF E+T I+ K+IS++ RE
Sbjct: 703 HDLEEELKEQILSHHSEKLAIAFGLICTPENTTLRIMKNLRVCNDCHSAIKFISKLVGRE 762
Query: 408 IIVRDASRFHHFRNGKCSCGDYW 430
IIVRDA+RFHHF+NG CSC DYW
Sbjct: 763 IIVRDATRFHHFKNGLCSCRDYW 785
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 131/300 (43%), Gaps = 38/300 (12%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRM-VGFRPDKIT 74
+M+SG + + M R+V++W +I+G Q+G + LD ++ M M +PDK T
Sbjct: 221 HMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLMDSSSKPDKFT 280
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG------------- 121
S +S+C+ L L G+QIHA +++ V ++LISMYS+ G
Sbjct: 281 LASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSM 340
Query: 122 -----------CLDDSVK---------TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLF 161
LD VK F DVV W++MI Y +G ++A+ LF
Sbjct: 341 ISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELF 400
Query: 162 EQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGR 221
M ++ + N+ T ++L S + G + + + ++ + +
Sbjct: 401 RSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQ-IHASATRSGNASSVSVSNALITMYAK 459
Query: 222 CGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYV 279
G +++A + + K + I W +++ A H + A + E +L G+ P D YV
Sbjct: 460 SGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENGIKP-DHITYV 518
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 92/202 (45%), Gaps = 32/202 (15%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y K G L E +V MP + ++W +I G Q G E+ + + M P + T
Sbjct: 89 YAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTL 148
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR---------------- 119
+V++SC+ + LG G+++H+ VVK G S + V +SL++MY++
Sbjct: 149 TNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKL 208
Query: 120 ---------------CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM 164
G +D + F + DVV W++MI+ Y HG EA+++F +M
Sbjct: 209 KSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKM 268
Query: 165 EQKEFEAND-VTFVSLLYACSH 185
D T S L AC++
Sbjct: 269 LMDSSSKPDKFTLASALSACAN 290
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 61/110 (55%), Gaps = 4/110 (3%)
Query: 91 GQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGF 150
G+ IHA ++KAG L V ++++L++ Y++ G + D+ + F E V W+ +++ Y
Sbjct: 32 GKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPVKSVFSWNIILSGYAK 91
Query: 151 HGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMV 200
G+ EEA +FE+M E + V++ +++ + G E + F MV
Sbjct: 92 GGRLEEAHRVFEEMP----EPDSVSWTAMIVGYNQMGQFENAIGMFREMV 137
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 343 bits (881), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 176/445 (39%), Positives = 261/445 (58%), Gaps = 15/445 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPI-RNVIAWITLIAGKAQNGLAEDVLDQ 59
GFE D ++L MY K GSL E + ++ + W +IA QNG A++ +
Sbjct: 561 GFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISS 620
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
++ MR+ F P+ +TFVSV+ + + LA +G HA +++ G + V +SLI MY++
Sbjct: 621 FHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAK 680
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG L S K F E ++ D V W++M++ Y HG G+ AI LF M++ + + + V+FVS+
Sbjct: 681 CGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSV 740
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L AC H GL E+G + F M KY KP LEHY C+VDLLGR G DE I+ MPV+
Sbjct: 741 LSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEP 800
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
+A +W LL +C+ H + + + ++ + P++ A +V+LS+I+A + RW + R
Sbjct: 801 DAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARS 860
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M + +KK PG SW+E+KN+VH F +GDKSHP+ + L L +M+ GYVPD
Sbjct: 861 KMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRSC 920
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFA----------EHTRGLIVM----LPFKYISEIKN 405
+ +++ E+KE L HSE+LAI FA + + L V K+IS+I
Sbjct: 921 VLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCADCHTTTKFISKITT 980
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
R IIVRDA+RFHHF +G CSC DYW
Sbjct: 981 RRIIVRDATRFHHFEDGICSCNDYW 1005
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 125/247 (50%), Gaps = 3/247 (1%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D++ + L MY K G + +++ + R+++AW +IA Q G E+ L + M+
Sbjct: 363 DILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQ 422
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+P+++T +S++ +C++L+ L G+ IH VKA D+ ++L+SMY++CG
Sbjct: 423 NQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFT 482
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
++ TF D+V W+S+I Y G AI++F ++ + T V ++ AC+
Sbjct: 483 AALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACA 542
Query: 185 HCGLKEKGMEFFDLMVK-KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
++G L+VK + +++ ++D+ +CG L A L + +
Sbjct: 543 LLNDLDQGTCIHGLIVKLGFESDCHVKN--ALIDMYAKCGSLPSAEFLFNKTDFTKDEVT 600
Query: 244 WKTLLSA 250
W +++A
Sbjct: 601 WNVIIAA 607
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 127/241 (52%), Gaps = 2/241 (0%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+ L +Y K G + +V M ++ ++W T++AG A NG +VL+ ++ M++ R
Sbjct: 267 NGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVR 326
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
+K++ VS + +E L +G++IH ++ D+ V + L+ MY++CG + + +
Sbjct: 327 INKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQL 386
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F + D+V WS++IAA G EEA++LF++M+ ++ + N VT +S+L AC+ L
Sbjct: 387 FWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLL 446
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
+ G VK L T +V + +CG+ A M + + + W +L++
Sbjct: 447 KLGKSIHCFTVKA-DMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSR-DIVTWNSLIN 504
Query: 250 A 250
Sbjct: 505 G 505
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 124/250 (49%), Gaps = 4/250 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E D+ G+ L MY K G L +V MP R+V+AW +IAG +Q+ + +D +
Sbjct: 159 GLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFF 218
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M++VG P ++ +++ +L+ + + IH V + S V + LI +YS+C
Sbjct: 219 RSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFS--SAVSNGLIDLYSKC 276
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +D + + F + D V W +M+A Y +G E + LF++M+ N V+ VS
Sbjct: 277 GDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAF 336
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
A + EKG E +++ R + T ++ + +CG ++A L + + +
Sbjct: 337 LAAAETIDLEKGKEIHGCALQQ-RIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGR-D 394
Query: 241 AIIWKTLLSA 250
+ W +++A
Sbjct: 395 LVAWSAIIAA 404
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 4/218 (1%)
Query: 33 PIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQ 92
P + I W ++I ++ + L+ Y M G PDK TF V+ +C+ L +G
Sbjct: 90 PNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGV 149
Query: 93 QIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHG 152
H E+ + G DV + + L+ MYS+ G L + + F + DVV W++MIA
Sbjct: 150 WFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSE 209
Query: 153 KGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY 212
EA++ F M+ E + V+ ++L E + +RR
Sbjct: 210 DPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYV---FRRDFSSAVS 266
Query: 213 TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
++DL +CG +D A + M V + + W T+++
Sbjct: 267 NGLIDLYSKCGDVDVARRVFDQM-VDQDDVSWGTMMAG 303
>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
Length = 830
Score = 343 bits (881), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 163/441 (36%), Positives = 265/441 (60%), Gaps = 24/441 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+V+ +++ Y+ SG L + +V ++MP +N ++W+ +++G GL+ED L +N MR
Sbjct: 367 DVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMR 426
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+P T+ I++C EL L G+Q+HA +V+ G ++L++MY++CG ++
Sbjct: 427 AEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVN 486
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D+ FL D V W++MI+A G HG G EA+ LF+QM + + + ++F+++L AC+
Sbjct: 487 DARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACN 546
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL ++G +F+ M + + P +HY ++DLLGR G + EA LI+ MP + IW
Sbjct: 547 HAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIW 606
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
+ +LS C+T+ + A+++ + PQ Y+LLSN +++A RW + R+ MR+R
Sbjct: 607 EAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDR 666
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
VKKEPG SW+E+ +++H F +GD HP + E+ +LE + + M+ GYVPDT +HDM
Sbjct: 667 GVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGARMRKLGYVPDTKFVLHDM 726
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPFKYISEIKN------------------- 405
+ EKEY L HSEKLA+ F GL+ + P ++ +KN
Sbjct: 727 EPHEKEYILFAHSEKLAVGF-----GLLKLPPGATVTVLKNLRICGDCHTAMMFMSKAVG 781
Query: 406 REIIVRDASRFHHFRNGKCSC 426
REI+VRD RFHHF++G+CSC
Sbjct: 782 REIVVRDVRRFHHFKDGECSC 802
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/333 (20%), Positives = 143/333 (42%), Gaps = 41/333 (12%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y++ G + V + + + W +I+G Q+G+ D + + M D+ TF
Sbjct: 242 YVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTF 301
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASL----DVGVISSLISMYSR------------ 119
SV+S+C+ G+ +H ++++ + + V ++L+++YS+
Sbjct: 302 TSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFD 361
Query: 120 -------------------CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINL 160
GCLD +V+ F Y + + W M++ Y G E+A+ L
Sbjct: 362 TMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKL 421
Query: 161 FEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLG 220
F QM ++ + D T+ + AC G + G + +V+ ++ +
Sbjct: 422 FNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASN-SAGNALLTMYA 480
Query: 221 RCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPY 278
+CG +++A + MP +++ W ++SA H A + ++++ G++P +
Sbjct: 481 KCGAVNDARLVFLVMP-NLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFL 539
Query: 279 VLLSNIHASAKRWQGVSEFREAMRERNVKKEPG 311
+L+ + + +G F E+M+ R+ PG
Sbjct: 540 TILTACNHAGLVDEGFHYF-ESMK-RDFGISPG 570
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 120/283 (42%), Gaps = 43/283 (15%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPI--RNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVG 67
+SL +G L + +P R+ + +++ A+ LA + ++ + G
Sbjct: 96 TSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSG 155
Query: 68 -FRPDKITFVSVISSCSELATLGQGQ--QIHAEVVKAGASLDVGVISSLISMYSRC---- 120
RPD +F ++IS+ ++ L Q+H V+K+GA+ + V ++LI++Y +C
Sbjct: 156 SLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPE 215
Query: 121 ------------------------------GCLDDSVKTFLECEYSDVVLWSSMIAAYGF 150
G ++ + F E + V+W++MI+ Y
Sbjct: 216 ASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQ 275
Query: 151 HGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVK---KYRRKP 207
G +A LF +M ++ ++ TF S+L AC++ G G +++ + +
Sbjct: 276 SGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEA 335
Query: 208 RLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
L +V L + G + A + M +K + + W T+LS
Sbjct: 336 ALPVNNALVTLYSKGGKIVIAKRIFDTMNLK-DVVSWNTILSG 377
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 53/91 (58%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE AG++L MY K G++ + V +MP + ++W +I+ Q+G + L+ +
Sbjct: 464 GFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELF 523
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQG 91
+ M G PD+I+F++++++C+ + +G
Sbjct: 524 DQMVAEGIDPDRISFLTILTACNHAGLVDEG 554
>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
Length = 720
Score = 343 bits (880), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 178/450 (39%), Positives = 273/450 (60%), Gaps = 20/450 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGS-LVEGEKVIRLMPIRNVIAWITLIAGKAQNG-LAEDVLD 58
GF + GS L MY K G+ + E KV + +++ W T+I+G +QN L+ + L+
Sbjct: 271 GFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLVVWNTMISGYSQNKELSVEALE 330
Query: 59 QYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAG-ASLDVGVISSLISMY 117
+ M+ G+ PD +FV IS+CS L++ QG+Q HA +K+ S + V ++L++MY
Sbjct: 331 CFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHALAMKSEIPSNQISVNNALVTMY 390
Query: 118 SRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
S+CG L D+ K F + V +S+IA Y HG G E++NLFEQM +T V
Sbjct: 391 SKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTESLNLFEQMLAASIAPTSITLV 450
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
S+L AC+H G E+G ++F++M + +P EHY+C++DLLGR G L EA LI MP
Sbjct: 451 SILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHYSCMIDLLGRAGKLSEAERLIDTMPF 510
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEF 297
+ W LL AC+ + + ++A + A + L + P +A PY++L++++++A++W+ +
Sbjct: 511 SPGSAAWAALLGACRKYGNMELAEKAANQFLQLEPTNAVPYIMLASMYSAARKWEEAARI 570
Query: 298 REAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDT 357
R+ MR+R ++K+PG SW+E+ +VH F D SHPR EI +YL+E+ +MK GYVPD
Sbjct: 571 RKLMRDRGIRKKPGCSWIELNKRVHVFVAEDNSHPRIKEIHMYLDEMFVKMKRAGYVPDV 630
Query: 358 G-ADMHDMDS--EEKEYNLKHHSEKLAIAFA----EHTRGLIVML----------PFKYI 400
A + D ++ +EKE L HHSEKLA+AF +H L+V+ K++
Sbjct: 631 RWAFVKDDETGEQEKEIMLAHHSEKLAVAFGLLFTKHGEPLLVVKNLRICGDCHNAIKFM 690
Query: 401 SEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
S I R+I VRDA RFH F +G+CSCGDYW
Sbjct: 691 SAIARRKITVRDAYRFHCFEDGRCSCGDYW 720
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 138/275 (50%), Gaps = 5/275 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLM--PIRNVIAWITLIAGKAQNGLAEDVLD 58
GF+ + +SL Y K+G L E E V M +R+ ++W ++I Q+ L
Sbjct: 168 GFDSYVSVKNSLLTYYSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALA 227
Query: 59 QYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
Y M GF D T SV+++ S + L G Q HA+ +K G + + V S LI MY+
Sbjct: 228 LYRDMVHRGFEIDMFTLASVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYA 287
Query: 119 RCGC-LDDSVKTFLECEYSDVVLWSSMIAAYGFHGK-GEEAINLFEQMEQKEFEANDVTF 176
+CG + +S K F E SD+V+W++MI+ Y + + EA+ F QM++ + +D +F
Sbjct: 288 KCGAGMSESRKVFEEICGSDLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSF 347
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
V + ACS+ +G +F L +K ++ +V + +CG L +A L + MP
Sbjct: 348 VCAISACSNLSSPSQGKQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMP 407
Query: 237 VKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVN 271
+ N + ++++ H + + E++L +
Sbjct: 408 -QHNTVTLNSIIAGYAQHGIGTESLNLFEQMLAAS 441
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 122/256 (47%), Gaps = 7/256 (2%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E ++ + ++L Y K + + +P +++++ TLI A G L +
Sbjct: 71 EPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGE 130
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
MR +G D TF VI++C +G +Q+H+ +G V V +SL++ YS+ G
Sbjct: 131 MREMGLVMDGFTFSGVITACCN--HVGLIRQLHSLAFSSGFDSYVSVKNSLLTYYSKNGI 188
Query: 123 LDDSVKTF--LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
L+++ F + E D V W+SMI AYG H +G +A+ L+ M + FE + T S+L
Sbjct: 189 LEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVL 248
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY-TCVVDLLGRCGYLDEAAALIRNMPVKA 239
S G++F +K K R H + ++D+ +CG + + +
Sbjct: 249 TTFSCVEDLSGGLQFHAKAIKTGFNKNR--HVGSGLIDMYAKCGAGMSESRKVFEEICGS 306
Query: 240 NAIIWKTLLSACKTHK 255
+ ++W T++S +K
Sbjct: 307 DLVVWNTMISGYSQNK 322
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 59/135 (43%), Gaps = 4/135 (2%)
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
M F +F ++ SC L G+ +H +K+ + + I +YS+C L
Sbjct: 1 MTQFSWTLQSFRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLT 60
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ F + +V ++++IAAY A +LF+Q+ Q + V+F +L+ A +
Sbjct: 61 TAHHAFNQTHEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDL----VSFNTLINAYA 116
Query: 185 HCGLKEKGMEFFDLM 199
G + F M
Sbjct: 117 DRGDTLSALSLFGEM 131
>gi|302800064|ref|XP_002981790.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
gi|300150622|gb|EFJ17272.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
Length = 611
Score = 343 bits (880), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 186/444 (41%), Positives = 271/444 (61%), Gaps = 20/444 (4%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIR---NVIAWITLIAGKAQNGLAEDVLDQYN 61
D+V G++L +MY K G L E KV IR + + W +IA AQ+G + LD Y
Sbjct: 170 DVVVGTALLNMYSKCGDLEEARKVFD--SIRHDADSVCWNAMIAAYAQHGRGKQALDLYR 227
Query: 62 LMR-MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M P + TFV+VI C+EL+ L QG+ IHA V ++ V ++L+ MY +C
Sbjct: 228 SMHDTTDLAPKQGTFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKC 287
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
GCLD+++ F + D + W+++I++Y +HG ++A+ L+++M+ + + +VTFV LL
Sbjct: 288 GCLDEALDVFHSMKLKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLL 347
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL G+++F M +R KP + H+ C++DLLGR G L EA ++++MP++AN
Sbjct: 348 SACSHGGLVADGLDYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQAN 407
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A+ W +LL ACKTH R A++++ P + YVLLSNI+A+A RW+ V + R+
Sbjct: 408 AVQWMSLLGACKTHGDLKRGVRAADQVVDRVPWTSGGYVLLSNIYAAAGRWKDVEKIRKI 467
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M R VKK PG SW+EI + VH+F GD+SHP+ EI + L ++ EMK GYVPDT +
Sbjct: 468 MAARGVKKSPGKSWIEIGDVVHEFVSGDRSHPQGEEIYVELGKMVEEMKGLGYVPDTSSV 527
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEH----------TRGLIVML----PFKYISEIKNR 406
HD++ EEKE L HSEKLAI + + L V L K++S I R
Sbjct: 528 FHDLEEEEKEDLLVCHSEKLAIVYGNMVVPGKSMLRIVKNLRVCLDCHTATKFMSRITGR 587
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
+I+VRDA+RFH F NG CSC DYW
Sbjct: 588 KIVVRDAARFHLFENGSCSCRDYW 611
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 150/290 (51%), Gaps = 10/290 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G ++V G+++ MY K G L + + +N + W ++ +G + L+ +
Sbjct: 61 GLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELF 120
Query: 61 NLM--RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASL--DVGVISSLISM 116
M R RPDK +F I +CS L L QG++IH + + G L DV V ++L++M
Sbjct: 121 REMCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNM 180
Query: 117 YSRCGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQM-EQKEFEANDV 174
YS+CG L+++ K F + +D V W++MIAAY HG+G++A++L+ M + +
Sbjct: 181 YSKCGDLEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQG 240
Query: 175 TFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRN 234
TFV+++ C+ ++G V+ L +V + G+CG LDEA + +
Sbjct: 241 TFVTVIDVCAELSALKQGRAIH-ARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHS 299
Query: 235 MPVKANAIIWKTLLSACKTHKSTDMAGRIAEE--ILGVNPQDAAPYVLLS 282
M +K + I W T++S+ H +D A + +E + GV P + LLS
Sbjct: 300 MKLK-DEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLS 348
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 119/220 (54%), Gaps = 13/220 (5%)
Query: 44 IAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELAT--LGQGQQIHAEVVKA 101
+A + NG + L + M G RPD++TF ++++ +++ + QG++IH +
Sbjct: 1 MAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARIS 60
Query: 102 GASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLF 161
G +V V +++ISMY +CG LDD+ F E ++ + V W++M+ Y G+ EA+ LF
Sbjct: 61 GLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELF 120
Query: 162 EQMEQKEFEA--NDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY-----TC 214
+M ++ A + +F + ACS+ E+G E +++ RR+ + H T
Sbjct: 121 REMCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEML----RREGKELHKDVVVGTA 176
Query: 215 VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
++++ +CG L+EA + ++ A+++ W +++A H
Sbjct: 177 LLNMYSKCGDLEEARKVFDSIRHDADSVCWNAMIAAYAQH 216
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 89/195 (45%), Gaps = 21/195 (10%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F+ +L+ ++L HMY K G L E V M +++ I+W T+I+ A +G ++ L Y
Sbjct: 270 FDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDEISWNTIISSYAYHGHSDQALLLYQ 329
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQG----------QQIHAEVVKAGASLDVGVIS 111
M + G +P ++TFV ++S+CS + G +I V G
Sbjct: 330 EMDLQGVKPTEVTFVGLLSACSHGGLVADGLDYFYRMQDDHRIKPSVPHFGC-------- 381
Query: 112 SLISMYSRCGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQ-MEQKEF 169
+I + R G L ++ ++ V W S++ A HG + + +Q +++ +
Sbjct: 382 -IIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKTHGDLKRGVRAADQVVDRVPW 440
Query: 170 EANDVTFVSLLYACS 184
+ +S +YA +
Sbjct: 441 TSGGYVLLSNIYAAA 455
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 343 bits (880), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 170/444 (38%), Positives = 268/444 (60%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +D G SL +Y+ G + + M R++++W +IAG +QNGL ++ ++ +
Sbjct: 438 GLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLF 497
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G +P +I + V +CS+L+ L G+++H +KA + D+ V SS+I MY++
Sbjct: 498 RQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKG 557
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
GC+ S + F DV W+ +IA YG HG+G+EA+ LFE+M + + +D TF +L
Sbjct: 558 GCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGIL 617
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL E G+E+F+ M+ + +P+LEHYTCVVD+LGR G +D+A LI MP +
Sbjct: 618 MACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPD 677
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+ IW +LLS+C+ H + + ++A ++L + P+ YVL+SN+ A + +W V R
Sbjct: 678 SRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGR 737
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M++ ++K+ G SW+E+ +VH F +GD+ P E+ L ++ GY PDTG+
Sbjct: 738 MKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKISSIGYTPDTGSV 797
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNR 406
+HD++ E+K L+ HSEKLAI+F +GL V + K+IS++ NR
Sbjct: 798 LHDLEEEDKIGILRGHSEKLAISFGLLNTAKGLPVRVYKNLRICGDCHNAAKFISKVVNR 857
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
+I+VRD RFHHFR+G CSCGDYW
Sbjct: 858 DIVVRDNKRFHHFRDGICSCGDYW 881
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 126/249 (50%), Gaps = 5/249 (2%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN-LM 63
D V + + MY GS + V + +N+ W +++ +N L ED + ++ L+
Sbjct: 33 DFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELI 92
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
+ +PD T VI +C+ L LG GQ IH K DV V ++LI+MY +CG +
Sbjct: 93 SVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLV 152
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM--EQKEFEANDVTFVSLLY 181
+++VK F ++V W+S+I + +G +E+ N F +M ++ F + T V++L
Sbjct: 153 EEAVKVFEHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLP 212
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
C+ EKGM L VK + + + + ++D+ +C +L E A L+ + K N
Sbjct: 213 VCAGEEDIEKGMAVHGLAVKLGLNEELMVNNS-LIDMYSKCRFLSE-AQLLFDKNDKKNI 270
Query: 242 IIWKTLLSA 250
+ W +++
Sbjct: 271 VSWNSMIGG 279
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 144/308 (46%), Gaps = 7/308 (2%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
+LVA + +A Y + G+L E+V LM + V +W L+ G AQN LD Y M
Sbjct: 342 ELVANAFIA-AYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMT 400
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G PD T S++ +CS + +L G++IH ++ G ++D + SL+S+Y CG
Sbjct: 401 DSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPF 460
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ F E+ +V W+ MIA Y +G +EAINLF QM + ++ + + ACS
Sbjct: 461 AAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACS 520
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
G E +K + + + ++D+ + G + + + + K + W
Sbjct: 521 QLSALRLGKELHCFALKAHLTEDIFVS-SSIIDMYAKGGCIGLSQRIFDRLREK-DVASW 578
Query: 245 KTLLSACKTHKSTDMAGRIAEEI--LGVNPQD-AAPYVLLSNIHASAKRWQGVSEFREAM 301
+++ H A + E++ LG+ P D +L++ HA G+ F + +
Sbjct: 579 NVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVE-DGLEYFNQML 637
Query: 302 RERNVKKE 309
N++ +
Sbjct: 638 NLHNIEPK 645
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 100/184 (54%), Gaps = 6/184 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ G++L MY K G + E KV MP RN+++W ++I G ++NG ++ + + M
Sbjct: 135 DVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFLQESFNAFREM- 193
Query: 65 MVG---FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
+VG F PD T V+V+ C+ + +G +H VK G + ++ V +SLI MYS+C
Sbjct: 194 LVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCR 253
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM--EQKEFEANDVTFVSL 179
L ++ F + + ++V W+SMI Y L ++M E + +A++ T +++
Sbjct: 254 FLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNV 313
Query: 180 LYAC 183
L C
Sbjct: 314 LPVC 317
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 128/289 (44%), Gaps = 24/289 (8%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +L+ +SL MY K L E + + +N+++W ++I G A+ EDV +
Sbjct: 234 GLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYARE---EDVCRTF 290
Query: 61 NLMRMV-----GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLIS 115
L++ + + D+ T ++V+ C E + L +++H + G + V ++ I+
Sbjct: 291 YLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIA 350
Query: 116 MYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVT 175
Y+RCG L S + F + V W++++ Y + +A++L+ QM + + T
Sbjct: 351 AYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFT 410
Query: 176 FVSLLYACS-----HCGLKEKGMEFFD-LMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAA 229
SLL ACS H G + G + L V + L Y C CG A
Sbjct: 411 IGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYIC-------CGKPFAAQ 463
Query: 230 ALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAA 276
L M ++ + W +++ + D A + ++L G+ P + A
Sbjct: 464 VLFDGMEHRS-LVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIA 511
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 343 bits (880), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 165/445 (37%), Positives = 267/445 (60%), Gaps = 25/445 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
++ ++L MY K GS+ + V MP++++I+W T+I G ++N L + L + M
Sbjct: 133 NIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDM- 191
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
++ +PD T ++ +C+ LA+L +G+++H +++ G D V ++L+ MY +CG
Sbjct: 192 VLEMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPV 251
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ F D++ W+ MIA YG HG G AI F +M Q E ++V+F+S+LYACS
Sbjct: 252 LARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACS 311
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL ++G FF++M + KP+LEHY C+VDLL R G L A I++MP++ +A IW
Sbjct: 312 HSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSMPIEPDATIW 371
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
LLS C+ H +A ++AE + + P++ YVLL+N +A A++W+ V + R+ + R
Sbjct: 372 GALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEKWEEVKKLRQKIGRR 431
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
+KK PG SW+E+K++VH F G+ SHP++ +I++ L+ L S+MK GY P T + +
Sbjct: 432 GLKKNPGCSWIEVKSKVHIFLAGNSSHPQAKKIEVLLKRLRSKMKEEGYFPKTRYALINA 491
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKN 405
DS +KE L HSEKLA+AF G++ + P K+IS+
Sbjct: 492 DSLQKETALCGHSEKLAMAF-----GILNLPPARTIRVSKNLRVCGDCHEMAKFISKTLG 546
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
REI++RD++RFHHF++G C C +W
Sbjct: 547 REIVLRDSNRFHHFKDGVCCCRGFW 571
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 143/302 (47%), Gaps = 5/302 (1%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L MY K G L V LM +R V+ W +LIA A+ GL+++ + ++ M G
Sbjct: 37 NTLLDMYAKCGVLDGAILVFDLMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVS 96
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
PD T +V+ +C+ +L G+ +H + + ++ V ++L+ MY++CG ++D+
Sbjct: 97 PDIFTITTVLHACACNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSV 156
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
FLE D++ W++MI Y + EA++LF M E + + T +L AC+
Sbjct: 157 FLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMVL-EMKPDGTTLACILPACASLASL 215
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
++G E +++ + + +VD+ +CG A L +P K + I W +++
Sbjct: 216 DRGKEVHGHILRNGFFSDQ-QVANALVDMYVKCGVPVLARLLFDMIPTK-DLITWTVMIA 273
Query: 250 ACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVK 307
H + A E+ G+ P + + +L S +G F E NVK
Sbjct: 274 GYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVK 333
Query: 308 KE 309
+
Sbjct: 334 PK 335
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 96/179 (53%), Gaps = 10/179 (5%)
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
VS++ +C+ + G+ +H VKA ++L+ MY++CG LD ++ F
Sbjct: 2 VSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSV 61
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
VV W+S+IAAY G +EAI LF +M+++ + T ++L+AC+ G E G +
Sbjct: 62 RTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKD- 120
Query: 196 FDLMVKKYRRKPRLEH--YTC--VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
V Y R+ ++ + C ++D+ +CG +++A ++ MPVK + I W T++
Sbjct: 121 ----VHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVK-DIISWNTMIGG 174
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 50/91 (54%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D ++L MY+K G V + ++P +++I W +IAG +G + + +
Sbjct: 229 GFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTF 288
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQG 91
N MR G PD+++F+S++ +CS L +G
Sbjct: 289 NEMRQAGIEPDEVSFISILYACSHSGLLDEG 319
>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03880, mitochondrial; Flags: Precursor
gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 168/444 (37%), Positives = 266/444 (59%), Gaps = 16/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E D+ S+L ++ K G + V M + I W ++I G AQN ++ L+ +
Sbjct: 189 GLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELF 248
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ GF ++ T SV+ +C+ LA L G Q H +VK L + ++L+ MY +C
Sbjct: 249 KRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILN--NALVDMYCKC 306
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L+D+++ F + + DV+ WS+MI+ +G +EA+ LFE+M+ + N +T V +L
Sbjct: 307 GSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVL 366
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
+ACSH GL E G +F M K Y P EHY C++DLLG+ G LD+A L+ M + +
Sbjct: 367 FACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPD 426
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A+ W+TLL AC+ ++ +A A++++ ++P+DA Y LLSNI+A++++W V E R
Sbjct: 427 AVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTR 486
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
MR+R +KKEPG SW+E+ Q+H F +GD SHP+ +E+ L +L + GYVP+T
Sbjct: 487 MRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFV 546
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPF--------------KYISEIKNR 406
+ D++ E+ E +L+HHSEKLA+AF T + ++ K S+++ R
Sbjct: 547 LQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIR 606
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
I++RD R+HHF++GKCSCGDYW
Sbjct: 607 SIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 139/256 (54%), Gaps = 7/256 (2%)
Query: 12 LAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPD 71
L +MY+K L + ++ MP RNVI+W T+I+ ++ + + L+ LM RP+
Sbjct: 102 LINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPN 161
Query: 72 KITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFL 131
T+ SV+ SC+ ++ + + +H ++K G DV V S+LI ++++ G +D++ F
Sbjct: 162 VYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFD 218
Query: 132 ECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEK 191
E D ++W+S+I + + + + A+ LF++M++ F A T S+L AC+ L E
Sbjct: 219 EMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLEL 278
Query: 192 GMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSAC 251
GM+ + + KY + L + +VD+ +CG L++A + M + + I W T++S
Sbjct: 279 GMQAH-VHIVKYDQDLILNN--ALVDMYCKCGSLEDALRVFNQMKER-DVITWSTMISGL 334
Query: 252 KTHKSTDMAGRIAEEI 267
+ + A ++ E +
Sbjct: 335 AQNGYSQEALKLFERM 350
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 97/202 (48%), Gaps = 21/202 (10%)
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
G D T+ +I C + +G I + G + +++ LI+MY + L+D+
Sbjct: 56 GLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDA 115
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS-- 184
+ F + +V+ W++MI+AY ++A+ L M + N T+ S+L +C+
Sbjct: 116 HQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGM 175
Query: 185 ------HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
HCG+ ++G+E D+ V+ + ++D+ + G ++A ++ M V
Sbjct: 176 SDVRMLHCGIIKEGLE-SDVFVR-----------SALIDVFAKLGEPEDALSVFDEM-VT 222
Query: 239 ANAIIWKTLLSACKTHKSTDMA 260
+AI+W +++ + +D+A
Sbjct: 223 GDAIVWNSIIGGFAQNSRSDVA 244
>gi|147781801|emb|CAN65443.1| hypothetical protein VITISV_011420 [Vitis vinifera]
Length = 485
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 166/450 (36%), Positives = 270/450 (60%), Gaps = 25/450 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + +L +++ MY K + ++V + ++V++W ++++G A++G ++ L +
Sbjct: 41 GLDENLSVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQESLALF 100
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M++ PD+IT V V+S+C++ L QG+ IH + K + D+ + ++L+ MY++C
Sbjct: 101 RKMQLHKIEPDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKC 160
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +D +++ F +V W++MI HG GE+AI+LF+QME + +DVTF++LL
Sbjct: 161 GSIDLALQVFRRMRVRNVFTWNAMIGGLAMHGHGEDAISLFDQMEXDKLMPDDVTFIALL 220
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL ++G+ F M K++ +PR+EHY CVVDLL R +D+A A I NMP+KAN
Sbjct: 221 CACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKAN 280
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+++W TLL AC++ D+A +I ++ + P YV+LSN++A +W + R+
Sbjct: 281 SVLWATLLGACRSGGHFDLAEKIXRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQ 340
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLR-GYVPDTGA 359
M+ + ++K PG SW+E+ +HQF GD+SH ++ +I +EE+T + L G+VP T
Sbjct: 341 MKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLDGGHVPGTAN 400
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYI 400
+ D++ EEKE++L HSEKLAIA GLI K
Sbjct: 401 VLFDIEEEEKEHSLFLHSEKLAIAL-----GLISTPSGSPIRIVKNLRVCNDCHSFLKVT 455
Query: 401 SEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
S++ NREI+ RD SRFHHF+ G CSC D+W
Sbjct: 456 SKVYNREIVARDRSRFHHFKEGSCSCMDFW 485
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 128/245 (52%), Gaps = 5/245 (2%)
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
+ ++ RPD++T VS++ +C++L L +G+ +H+ + G ++ V ++++ MY +C
Sbjct: 1 MTKLDNLRPDEVTMVSLVPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCKCD 60
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
++ + + F DV+ W+SM++ G +E++ LF +M+ + E +++T V +L
Sbjct: 61 DIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLS 120
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
AC+ G ++G ++ L++ K+ L T +VD+ +CG +D A + R M V+ N
Sbjct: 121 ACAQTGALDQG-KYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVR-NV 178
Query: 242 IIWKTLLSACKTHKSTDMAGRIAE--EILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
W ++ H + A + + E + P D LL + +G++ F +
Sbjct: 179 FTWNAMIGGLAMHGHGEDAISLFDQMEXDKLMPDDVTFIALLCACSHAGLVDEGLAMF-Q 237
Query: 300 AMRER 304
AM+ +
Sbjct: 238 AMKNK 242
>gi|125599128|gb|EAZ38704.1| hypothetical protein OsJ_23104 [Oryza sativa Japonica Group]
Length = 1280
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 175/447 (39%), Positives = 265/447 (59%), Gaps = 17/447 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIR--NVIAWITLIAGKAQNGLAEDVLD 58
GF + +SL H+Y G KV MP+R N+++W +++ A NG +VL
Sbjct: 834 GFVTLVFVQNSLVHLYGACGLFESAHKVFDEMPVRGRNLVSWNSMLNSFAANGRPNEVLT 893
Query: 59 QYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
+ M V F PD T VSV+++C+E L G+++H V K G + V ++LI +Y+
Sbjct: 894 VFWEMLGVDFAPDGFTIVSVLTACAEFGALALGRRVHVYVEKVGLVENSHVSNALIDLYA 953
Query: 119 RCGCLDDSVKTFLECEYS-DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
+CG ++D+ + F E VV W+S+I +G G+EA+ LF ME+++ ++T V
Sbjct: 954 KCGSVNDARRIFEEMGLGRTVVSWTSLIVGLAANGFGKEALELFSLMEREKLVPTEITMV 1013
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
+LYACSHCGL + G +FD M + Y PR+EH C+VDLLGR G ++EA I MP+
Sbjct: 1014 GVLYACSHCGLVDDGFRYFDRMKEDYGISPRIEHLGCMVDLLGRAGRVEEAYDYIITMPL 1073
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEF 297
+ NA++W+TLL +C HK ++ E ++ ++P + YVLLSN++A+ W V
Sbjct: 1074 EPNAVVWRTLLGSCAMHKKLELGKVAWERLVELDPGHSGDYVLLSNLYAAVGMWADVHVL 1133
Query: 298 REAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDT 357
R+ M + V+K PG S +E++N V++F MGD+SHP S +I L E+ ++ GY+P T
Sbjct: 1134 RKTMVKDRVRKNPGHSLVELRNSVYEFVMGDRSHPESEQIYEMLAEIAERLRREGYIPRT 1193
Query: 358 GADMHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEI 403
+ D++ EEKE L +HSE+LAIAFA + G+ + + F IS++
Sbjct: 1194 SNVLADIEEEEKETALNYHSERLAIAFALLKSLPGIPIRIIKNLRMCGDCHVAFNLISKV 1253
Query: 404 KNREIIVRDASRFHHFRNGKCSCGDYW 430
+REIIVRD SRFHHF+ G CSC DYW
Sbjct: 1254 YDREIIVRDRSRFHHFQGGACSCKDYW 1280
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 90/181 (49%), Gaps = 3/181 (1%)
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
PD T+ +I +C+ L L +G+ +HAE K G V V +SL+ +Y CG + + K
Sbjct: 802 PDTHTYPPLIQACARLLALREGECLHAEAAKNGFVTLVFVQNSLVHLYGACGLFESAHKV 861
Query: 130 FLECEY--SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCG 187
F E ++V W+SM+ ++ +G+ E + +F +M +F + T VS+L AC+ G
Sbjct: 862 FDEMPVRGRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIVSVLTACAEFG 921
Query: 188 LKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTL 247
G + V+K ++DL +CG +++A + M + + W +L
Sbjct: 922 ALALGRR-VHVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRTVVSWTSL 980
Query: 248 L 248
+
Sbjct: 981 I 981
>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 181/481 (37%), Positives = 270/481 (56%), Gaps = 56/481 (11%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQ----------- 49
GF D ++L +MY G LV KV M ++V++W T+I AQ
Sbjct: 105 GFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLF 164
Query: 50 ----------------NGLAED-----VLDQYNLMRMVGFRPDKITFVSVISSCSELATL 88
NG ED L +N M++ G + DK+T S++ +C+ L L
Sbjct: 165 RRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGAL 224
Query: 89 GQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAY 148
G+ +H + K +DV + ++L+ MY++CG ++ +++ F E DV+ W+++I
Sbjct: 225 ELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGL 284
Query: 149 GFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPR 208
G+G +A+ LF +M+ E + + +TFV +L ACSH GL +G+ +F+ M KY +P
Sbjct: 285 AMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPS 344
Query: 209 LEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL 268
+EHY C+VD+LGR G + EA LI+NMP+ + + LLSAC+ H + +A R A++++
Sbjct: 345 IEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLI 404
Query: 269 GVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGD 328
++P++ YVLLSNI++S K W+ + RE M ERN+KK PG S +E+ VH+F GD
Sbjct: 405 ELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIEVGGVVHEFVKGD 464
Query: 329 KSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFAEHT 388
SHP+S EI L+++ +K GYVPD + DMD +EKE L HSEKLAIAF
Sbjct: 465 VSHPQSSEIYETLDDMMRRLKSAGYVPDKSEVLFDMDEKEKENELSLHSEKLAIAF---- 520
Query: 389 RGLIVMLP-------------------FKYISEIKNREIIVRDASRFHHFRNGKCSCGDY 429
GL+ P K+ISE+ NREIIVRD +RFHHF G CSC D+
Sbjct: 521 -GLLSTTPGTPIRVVKNLRVCSDCHSAMKFISEVYNREIIVRDRNRFHHFTKGSCSCRDF 579
Query: 430 W 430
W
Sbjct: 580 W 580
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 120/262 (45%), Gaps = 37/262 (14%)
Query: 19 SGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSV 78
SGSL V +P ++I G L + Y LM + G PD+ TF S+
Sbjct: 25 SGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSL 84
Query: 79 ISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDV 138
SC L +G+Q+H K G + D + ++L++MYS CGCL + K F + V
Sbjct: 85 FKSC---GVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSV 141
Query: 139 VLWSSMIAAYG---------------------------FHG-----KGEEAINLFEQMEQ 166
V W++MI AY +G EEA++LF +M+
Sbjct: 142 VSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQL 201
Query: 167 KEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLD 226
+ + VT SLL AC+H G E G ++ + ++K + + + T +VD+ +CG ++
Sbjct: 202 SGVKGDKVTMASLLIACTHLGALELG-KWLHVYIEKEKIEVDVALGTALVDMYAKCGSIE 260
Query: 227 EAAALIRNMPVKANAIIWKTLL 248
A + + MP K + + W L+
Sbjct: 261 SAMRVFQEMPEK-DVMTWTALI 281
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 173/444 (38%), Positives = 271/444 (61%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G ELD+ G++L MY KSGS+ + V M +R+V++W +I A++G + D +
Sbjct: 260 GLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLF 319
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G +PD I F+S++++C+ L ++IH + +G +DV V ++L+ MYS+
Sbjct: 320 LQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKS 379
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +DD+ F + +VV W++MI+ HG G++A+ +F +M + + VTFV++L
Sbjct: 380 GSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVL 439
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL ++G + M + Y +P + H C+VDLLGR G L EA I NM V +
Sbjct: 440 SACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPD 499
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
W LL +C+T+ + ++ +A+E L ++P++AA YVLLSNI+A A +W VS R
Sbjct: 500 EATWGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNIYAEAGKWDMVSWVRTM 559
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
MRER ++KEPG SW+E+ N++H F + D SHP EI+ +++ ++K GY+PDT
Sbjct: 560 MRERGIRKEPGRSWIEVDNKIHDFLVADSSHPECKEINESKDKVIEKIKAEGYIPDTRLV 619
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA-EHT---------RGLIVML----PFKYISEIKNR 406
+ + + ++KE ++ HSEKLAI + HT + L V K IS+++ R
Sbjct: 620 LKNKNMKDKELDICSHSEKLAIVYGLMHTPPGNPIRVFKNLRVCTDCHGATKLISKVEGR 679
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EIIVRDA+RFHHF++G CSCGDYW
Sbjct: 680 EIIVRDANRFHHFKDGVCSCGDYW 703
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 136/261 (52%), Gaps = 16/261 (6%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E D+ G++L MY K GS+ E ++ + ++I+W +I AQ+G ++
Sbjct: 159 GLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLM 218
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M GF+P+ IT+VS++++C+ L +++H + AG LDV V ++L+ MY++
Sbjct: 219 LQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKS 278
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +DD+ F + DVV W+ MI A+ HG+G EA +LF QM+ + + + + F+S+L
Sbjct: 279 GSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSIL 338
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKP-------RLEHYTCVVDLLGRCGYLDEAAALIR 233
AC+ G E VKK R + T +V + + G +D+A +
Sbjct: 339 NACASAGALE--------WVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFD 390
Query: 234 NMPVKANAIIWKTLLSACKTH 254
M V+ N + W ++S H
Sbjct: 391 RMKVR-NVVSWNAMISGLAQH 410
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 152/290 (52%), Gaps = 23/290 (7%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L H+Y++ G L E V + ++ +W +IAG ++ AED + + M G +
Sbjct: 67 NNLLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQ 126
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P+ T++ ++ +C+ L+ L G+++HA + G DV V ++L+ MY +CG ++++ +
Sbjct: 127 PNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRI 186
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F D++ W+ MI AY G G+EA L QMEQ+ F+ N +T+VS+L AC+
Sbjct: 187 FDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACA----S 242
Query: 190 EKGMEFFDLMVKKYRRKP-------RLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
E +++ VK+ R + T +V + + G +D+A + M V+ + +
Sbjct: 243 EGALKW----VKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVR-DVV 297
Query: 243 IWKTLLSA----CKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASA 288
W ++ A + H++ D+ ++ E G P DA ++ + N ASA
Sbjct: 298 SWNVMIGAFAEHGRGHEAYDLFLQMQTE--GCKP-DAIMFLSILNACASA 344
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 117/249 (46%), Gaps = 8/249 (3%)
Query: 47 KAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLD 106
+ N L+E ++ N ++ G D +V V+ C + L +Q+H ++K+ +
Sbjct: 4 QTANTLSEAIVVLMNRLQR-GLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQN 62
Query: 107 VGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQ 166
V+++L+ +Y CG L ++ F W++MIA Y H E+A+ LF +M
Sbjct: 63 AHVMNNLLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCH 122
Query: 167 KEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLD 226
+ + N T++ +L AC+ + G E ++ + + T ++ + G+CG ++
Sbjct: 123 EGVQPNAGTYMIILKACASLSALKWGKEVH-ACIRHGGLESDVRVGTALLRMYGKCGSIN 181
Query: 227 EAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLSNI 284
EA + N+ + + I W ++ A + A R+ ++ G P +A YV + N
Sbjct: 182 EARRIFDNL-MNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKP-NAITYVSILNA 239
Query: 285 HAS--AKRW 291
AS A +W
Sbjct: 240 CASEGALKW 248
>gi|225460265|ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Vitis vinifera]
Length = 610
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 177/444 (39%), Positives = 265/444 (59%), Gaps = 25/444 (5%)
Query: 7 VAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV 66
++ +++ Y +SG ++ ++ + MP++N+++W LI+G Q+G D + MR
Sbjct: 172 ISWTAMISGYAQSGRKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSK 231
Query: 67 GFR-PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD 125
G D S+I + + LA LG G+QIH V+ G + V ++L+ MY++C +
Sbjct: 232 GIDIVDPFILSSIIGASANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLA 291
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
+ K F D+V W+S+I HG EEA++L+ +M + N+VTFV L+YACSH
Sbjct: 292 AKKIFGRMVQRDIVSWTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGLIYACSH 351
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
GL KG FF+ M+K Y P L+HYTC++DLL R G+L+EA LI+ MP K + W
Sbjct: 352 VGLVSKGRYFFNSMIKDYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWA 411
Query: 246 TLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERN 305
LLSAC H++T + R+A+ +L + P+D + Y+LLSNI+ASA W+ VS+ R M
Sbjct: 412 ALLSACNHHRNTLIGIRVADHLLSLKPEDPSTYILLSNIYASAAMWESVSKVRRLMAAME 471
Query: 306 VKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMD 365
VKKEPG S + + + F G+ SHP EI LEEL +EMK RGY+PDT + +HD++
Sbjct: 472 VKKEPGYSCIVLGKESQVFLAGETSHPAKEEIFGLLEELDAEMKKRGYIPDTSSVLHDLE 531
Query: 366 SEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNR 406
+EKE L HSE+LA+A+ GL+ +P K+IS I R
Sbjct: 532 QQEKERQLFWHSERLAVAY-----GLLKGIPGMVLHIVKNLRVCGDCHTVLKFISIIVKR 586
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EI+VRDA+R+HHF++GKCSC ++W
Sbjct: 587 EIVVRDANRYHHFKDGKCSCNNFW 610
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 83/161 (51%), Gaps = 1/161 (0%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM-RMVGF 68
++L +MY K G + + + +P R+ I+W +++ Q L L + M + G
Sbjct: 42 NNLINMYGKCGLIQDALNLFNQLPHRDPISWASILTANNQANLPHLTLSMFPAMFKQDGL 101
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
+PD F ++ +C+ L + QG+Q+HA + + S D V SSL+ MY++CG D
Sbjct: 102 QPDHYVFACLVKACAILGAMKQGKQVHATFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRV 161
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEF 169
F + + W++MI+ Y G+ +AI LF++M K
Sbjct: 162 VFDSISSKNSISWTAMISGYAQSGRKLDAIQLFQKMPVKNL 202
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 33/185 (17%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+E L ++L MY K ++ +K+ M R++++W ++I G AQ+GLAE+ L Y
Sbjct: 268 GYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIVSWTSIIVGTAQHGLAEEALSLY 327
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
N M G +P+++TFV +I +CS + + +G+ ++K D G+ SL
Sbjct: 328 NRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSMIK-----DYGINPSL----QHY 378
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
CL D + G EEA NL + M F+ ++ T+ +LL
Sbjct: 379 TCLLDLLSR---------------------SGHLEEAENLIKAM---PFKPDEATWAALL 414
Query: 181 YACSH 185
AC+H
Sbjct: 415 SACNH 419
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 83/177 (46%), Gaps = 3/177 (1%)
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
V + +C+ + G+++H ++K G + ++LI+MY +CG + D++ F +
Sbjct: 6 LVYQLQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLP 65
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQM-EQKEFEANDVTFVSLLYACSHCGLKEKGM 193
+ D + W+S++ A +++F M +Q + + F L+ AC+ G ++G
Sbjct: 66 HRDPISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGK 125
Query: 194 EFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+ + + + +VD+ +CG D + ++ K N+I W ++S
Sbjct: 126 QVHATFIVSPVSDDDVVK-SSLVDMYAKCGLPDIGRVVFDSISSK-NSISWTAMISG 180
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 179/445 (40%), Positives = 257/445 (57%), Gaps = 17/445 (3%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E D+V+ + L Y K G + + +P ++++AW ++ G AQNG ++ L+ +
Sbjct: 206 ERDVVSWTELIVAYAKYGDMESASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQK 265
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIH--AEVVKAGASLDVGVISSLISMYSRC 120
M+ VG D++T VIS+C++L + I AE G S +V V S+LI MYS+C
Sbjct: 266 MQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKC 325
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G D++ K F + +V +SSMI Y HG+ A+ LF M + E N VTF+ +L
Sbjct: 326 GSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGIL 385
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL E+G + F M K + P +HY C+VDLLGR G L+EA L++ MP++ N
Sbjct: 386 SACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPN 445
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+W LL AC+ H + D+A A E+ + P Y+LLSNI+ASA RW+ VS+ R+
Sbjct: 446 GGVWGALLGACRIHGNPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKV 505
Query: 301 MRERNVKKEPGVSWLEIKN-QVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
+RE+ KK PG SW E KN ++H F GD +HPRS EI L++L ++ GY P+ G+
Sbjct: 506 IREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSHGYKPNLGS 565
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFA----EHTRGLIVMLPFKYI----------SEIKN 405
+D+ +EKE L HSEKLA+A+ E + +M + SEI
Sbjct: 566 APYDLTDDEKERILMSHSEKLALAYGLLCTEAGDTIKIMKNIRICEDCHNVMCAASEITG 625
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
REIIVRD RFHHF NG CSCG++W
Sbjct: 626 REIIVRDNMRFHHFHNGTCSCGNFW 650
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 82/165 (49%), Gaps = 5/165 (3%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
N W +I G A GL + + Y MR G P TF ++ +C + G+Q+H
Sbjct: 106 NPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVH 165
Query: 96 AEVVKAGA-SLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKG 154
A+ + G + D+ V +S+I +Y +CG L + K F E DVV W+ +I AY +G
Sbjct: 166 AQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDM 225
Query: 155 EEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLM 199
E A LF+ + K+ V + +++ + G ++ +E+F M
Sbjct: 226 ESASGLFDDLPSKDM----VAWTAMVTGYAQNGRPKEALEYFQKM 266
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
[Vitis vinifera]
Length = 1058
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 171/440 (38%), Positives = 267/440 (60%), Gaps = 15/440 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D V+ +SL ++ L + V MP R+V++W +I+ Q G E LD + M
Sbjct: 620 DTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDML 679
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G +P+++T S++S+C L + G+Q HA + K G + V +SLI+MY +CG +
Sbjct: 680 ARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCG-YE 738
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D F E D++ W++++ +G G+EAI +FEQME + + ++F+ +L ACS
Sbjct: 739 DGFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACS 798
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL ++G F+ M +KY P + HYTC+VDLLGR GYL EA ALI NMPVK +++IW
Sbjct: 799 HAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIW 858
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
+ LL AC+ H++ ++ R+AE + + +A YVLLSN+ AS W V+E R+ M+++
Sbjct: 859 EALLGACRIHRNVELGQRVAERLFQMTKPKSATYVLLSNLFASQGMWDKVAEIRKLMKDQ 918
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
+ KEPG+SW+++KN++H F GD++H + EI L+E + GY+PDT +HD+
Sbjct: 919 GLTKEPGISWIQVKNKLHCFVTGDRTHDQIEEIYSALKEYYGCFRATGYMPDTNFVLHDV 978
Query: 365 DSEEKEYNLKHHSEKLAIAFA--EHTRGLIVMLP------------FKYISEIKNREIIV 410
+ E+K+ L +HSEKLA+ F G + + K++S++ R+II+
Sbjct: 979 EEEQKQNELLYHSEKLAVVFGILSTPNGSPIQIIKNLRICGDCHTFMKFMSKVTLRKIII 1038
Query: 411 RDASRFHHFRNGKCSCGDYW 430
RD +RFHHFR+G CSCGDYW
Sbjct: 1039 RDGNRFHHFRDGSCSCGDYW 1058
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 142/301 (47%), Gaps = 36/301 (11%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
++VA +++ Y ++G L E + + + MP++N +W +IAG QN + + L+ +
Sbjct: 488 NVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELH 547
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG--- 121
G P +F S +S+C+ + + G+ IH+ +K G + V++ LISMY++CG
Sbjct: 548 RSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVE 607
Query: 122 ----------------------------CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGK 153
LDD+ F + DVV W+++I+AY G
Sbjct: 608 DGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGH 667
Query: 154 GEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYT 213
GE A++LF M + + N +T SLL AC + G + G +F L+ K L
Sbjct: 668 GEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIF-KLGFDTFLFVGN 726
Query: 214 CVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAE--EILGVN 271
++ + +CGY ++ + MP + + I W +L C + A +I E E+ G+
Sbjct: 727 SLITMYFKCGY-EDGFCVFEEMP-EHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGIL 784
Query: 272 P 272
P
Sbjct: 785 P 785
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 134/271 (49%), Gaps = 18/271 (6%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+E D+V GS++ + Y ++GSL MP RN +W T+IA AQ G +D + Y
Sbjct: 391 GYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLY 450
Query: 61 NLMRMVGFRPDKI--TFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
+ P++ T +++++ +++ + + + I E++ +V +++I+ Y+
Sbjct: 451 ERV------PEQTVATKTAMMTAYAQVGRIQKARLIFDEILNP----NVVAWNAIIAGYT 500
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+ G L ++ F + + W++MIA + + + EA+ L ++ + +D +F S
Sbjct: 501 QNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTS 560
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC--VVDLLGRCGYLDEAAALIRNMP 236
L AC++ G E G L +K + Y ++ + +CG +++ + + R +
Sbjct: 561 ALSACANIGDVEIGRVIHSLAIKT---GCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIR 617
Query: 237 VKANAIIWKTLLSACKTHKSTDMAGRIAEEI 267
VK + + W +L+S + D A + E++
Sbjct: 618 VK-DTVSWNSLISGLSENYMLDDARVVFEKM 647
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 119/248 (47%), Gaps = 10/248 (4%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E ++ + +S+ Y + E ++ MP RN ++W+ +I+G + D +
Sbjct: 292 EKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVK 351
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M RPD+ FV V+S+ + L L + +K G DV V S++++ Y+R G
Sbjct: 352 MCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGS 411
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
LD ++ F + W++MIAA+ G+ ++AI L+E++ ++ T +++ A
Sbjct: 412 LDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTV----ATKTAMMTA 467
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
+ G +K FD ++ P + + ++ + G L EA L + MPVK N+
Sbjct: 468 YAQVGRIQKARLIFDEIL-----NPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVK-NSA 521
Query: 243 IWKTLLSA 250
W +++
Sbjct: 522 SWAAMIAG 529
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 4/201 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ L G+SL MY K G +G V MP ++I W ++ G AQNGL ++ + +
Sbjct: 717 GFDTFLFVGNSLITMYFKCG-YEDGFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIF 775
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQG-QQIHAEVVKAGASLDVGVISSLISMYSR 119
M + G PD+++F+ V+ +CS + +G ++ K G V + ++ + R
Sbjct: 776 EQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGR 835
Query: 120 CGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
G L ++ D V+W +++ A H E + E++ Q + T+V
Sbjct: 836 AGYLSEAEALIENMPVKPDSVIWEALLGACRIHRNVELGQRVAERLFQMT-KPKSATYVL 894
Query: 179 LLYACSHCGLKEKGMEFFDLM 199
L + G+ +K E LM
Sbjct: 895 LSNLFASQGMWDKVAEIRKLM 915
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 113/246 (45%), Gaps = 20/246 (8%)
Query: 20 GSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVI 79
G + E +V M R+V++W ++I G +QNG ++ ++ R T+ ++
Sbjct: 185 GRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIR----TWTILL 240
Query: 80 SSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVV 139
+ ++ + + + EV ++ +V +++IS Y + G L ++ K F E +V
Sbjct: 241 TGYAKEGRIEEAR----EVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVA 296
Query: 140 LWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLM 199
W+S++ Y + EA LF+QM ++ N V+++ ++ H E +D+
Sbjct: 297 SWNSVVTGYCHCYRMSEARELFDQMPER----NSVSWMVMISGYVHIS---DYWEAWDVF 349
Query: 200 VKKYRRKPRLEHYTCVVDLLGRCGYLD-EAAALIRNMPVK----ANAIIWKTLLSACKTH 254
VK R R + VV L G D E +R + +K + ++ +L+A +
Sbjct: 350 VKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRN 409
Query: 255 KSTDMA 260
S D+A
Sbjct: 410 GSLDLA 415
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 80/170 (47%), Gaps = 17/170 (10%)
Query: 84 ELATLG---QGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVL 140
EL LG + +++ E+++ DV +S+I+ YS+ G +D++ F ++
Sbjct: 180 ELGRLGRVEEARRVFNEMIQR----DVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIRT 235
Query: 141 WSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMV 200
W+ ++ Y G+ EEA +FE M ++ N V++ +++ G + + FD M
Sbjct: 236 WTILLTGYAKEGRIEEAREVFESMTER----NVVSWNAMISGYVQNGDLKNARKLFDEMP 291
Query: 201 KKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+K + + VV C + EA L MP + N++ W ++S
Sbjct: 292 EK-----NVASWNSVVTGYCHCYRMSEARELFDQMPER-NSVSWMVMISG 335
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 11/149 (7%)
Query: 111 SSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFE 170
++ I R G ++++ + F E DVV W+SMI Y +GK +EA LF+ K
Sbjct: 175 NTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGK--- 231
Query: 171 ANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAA 230
N T+ LL + G E+ E F+ M ++ + + ++ + G L A
Sbjct: 232 -NIRTWTILLTGYAKEGRIEEAREVFESMTER-----NVVSWNAMISGYVQNGDLKNARK 285
Query: 231 LIRNMPVKANAIIWKTLLSA-CKTHKSTD 258
L MP K N W ++++ C ++ ++
Sbjct: 286 LFDEMPEK-NVASWNSVVTGYCHCYRMSE 313
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 162/445 (36%), Positives = 265/445 (59%), Gaps = 24/445 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+V+ +++ Y++SG L ++ + MP ++ ++W+ +++G GLAED L +N MR
Sbjct: 365 DVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMR 424
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+P T+ +++C EL L G+Q+HA +V+ G ++L++MY+RCG +
Sbjct: 425 SEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVK 484
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D+ FL D V W++MI+A G HG G EA+ LF+QM + + ++F+++L AC+
Sbjct: 485 DARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTACN 544
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL + G ++F+ M + + P +HY ++DLLGR G + EA LI+ MP + IW
Sbjct: 545 HAGLVDDGFQYFESMERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIW 604
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
+ +LS C+ + ++ A+++ + P+ Y+LLSN +++A RW + R+ MR+R
Sbjct: 605 EAILSGCRINGDMELGAYAADQLFKMVPEHDGTYILLSNTYSAAGRWVDAARVRKLMRDR 664
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
VKKEPG SW+E+ N+VH F +GD HP + E+ +LE + ++M+ GYVPDT + DM
Sbjct: 665 GVKKEPGCSWIEVGNKVHVFLVGDTKHPDAHEVYRFLEMVGAKMRKLGYVPDTKFALQDM 724
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPFKYISEIKN------------------- 405
EKEY L HSE+LA++F GL+ + ++ +KN
Sbjct: 725 APHEKEYVLFAHSERLAVSF-----GLLKLPAGATVTVLKNLKICGDCHTAMMFMSRAVG 779
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
REI+VRD RFHHF++G+CSCG+YW
Sbjct: 780 REIVVRDVRRFHHFKDGECSCGNYW 804
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 131/311 (42%), Gaps = 41/311 (13%)
Query: 38 IAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAE 97
+ W +I+G Q+G+ + + + M PD+ TF S++S+C+ G+ +H +
Sbjct: 262 VVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQ 321
Query: 98 VVKAGASL----DVGVISSLISMYSR-------------------------------CGC 122
++ + V ++L+++YS+ GC
Sbjct: 322 FIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGC 381
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
LD++ + F E Y + W M++ Y G E+A+ LF QM ++ + D T+ + A
Sbjct: 382 LDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAA 441
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
C G + G + +V+ ++ + RCG + +A + MP +++
Sbjct: 442 CGELGALKHGKQLHAHLVQCGFEASN-SAGNALLTMYARCGAVKDARLVFLVMP-NVDSV 499
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
W ++SA H A + ++++ G+ P + +L+ + + G F E+
Sbjct: 500 SWNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYF-ES 558
Query: 301 MRERNVKKEPG 311
M ER+ PG
Sbjct: 559 M-ERDFGISPG 568
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 124/304 (40%), Gaps = 44/304 (14%)
Query: 7 VAGSSLAHMYMKSGSLVEGEKVIRLMPI--RNVIAWITLIAGKAQNGLAEDVLDQYN--L 62
VA +SL Y +G L + +P+ R+ + +I+ A+ LA + + L
Sbjct: 90 VAATSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLL 149
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQ--QIHAEVVKAGASLDVGVISSLISMYSRC 120
RPD +F S++S+ ++ L Q+H V K GA + V ++LI++Y +C
Sbjct: 150 ASDDSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKC 209
Query: 121 ---GCLDDSVKTFLECEYSDV-------------------------------VLWSSMIA 146
G D+ K E D V+W++MI+
Sbjct: 210 DAPGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMIS 269
Query: 147 AYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF---FDLMVKKY 203
Y G EA LF +M K ++ TF SLL AC++ G G F + +
Sbjct: 270 GYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDF 329
Query: 204 RRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRI 263
+ L +V L + G + A + +M +K + + W T+LS D A RI
Sbjct: 330 VPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLK-DVVSWNTILSGYIESGCLDNAARI 388
Query: 264 AEEI 267
+E+
Sbjct: 389 FKEM 392
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE AG++L MY + G++ + V +MP + ++W +I+ Q+G + L+ +
Sbjct: 462 GFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELF 521
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQ 93
+ M G PD+I+F++++++C+ + G Q
Sbjct: 522 DQMVAQGIYPDRISFLTILTACNHAGLVDDGFQ 554
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 181/444 (40%), Positives = 264/444 (59%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G DL AG+SL MY K+G + + + M +++ +++ L++G QNG AE+ +
Sbjct: 255 GVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVF 314
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ PD T VS+I +CS LA L G+ H V+ G + + + ++LI MY++C
Sbjct: 315 KKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKC 374
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +D S + F D+V W++MIA YG HG G+EA LF +M F + VTF+ LL
Sbjct: 375 GRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLL 434
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL +G +F +M Y PR+EHY C+VDLL R G+LDEA I++MP++A+
Sbjct: 435 SACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRAD 494
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+W LL AC+ +K+ D+ +++ I + P+ +VLLSNI+++A R+ +E R
Sbjct: 495 VRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRII 554
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
+ + KK PG SW+EI +H F GD+SHP+S EI L+ + +K GY PDT
Sbjct: 555 QKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFV 614
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEH----------TRGLIVM----LPFKYISEIKNR 406
+ D++ EEKE L HSEKLAIA+ T+ L V K+IS +K R
Sbjct: 615 LQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHISLVKRR 674
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
IIVRDA+RFHHF+NG+CSCGD+W
Sbjct: 675 AIIVRDANRFHHFKNGQCSCGDFW 698
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 134/280 (47%), Gaps = 11/280 (3%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G++L MY K GSL+ +V MP RN + W LI G + M G
Sbjct: 161 GTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGL 220
Query: 69 ---RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD 125
P I S + +C+ L L G+Q+HA + K+G D+ +SL+SMY++ G +D
Sbjct: 221 CFLSPTSIA--SALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQ 278
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
++ F E D V +S++++ Y +G+ EEA +F++M+ E + T VSL+ ACSH
Sbjct: 279 AIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSH 338
Query: 186 CGLKEKG-MEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
+ G ++++ + + ++D+ +CG +D + + MP + + + W
Sbjct: 339 LAALQHGRCSHGSVIIRGLASETSI--CNALIDMYAKCGRIDLSRQVFNMMPSR-DIVSW 395
Query: 245 KTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLS 282
T+++ H A + E+ LG P LLS
Sbjct: 396 NTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLS 435
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 135/295 (45%), Gaps = 16/295 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + DL ++L MY+K L + + MP R+++AW ++AG A +G+ +
Sbjct: 40 GLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHL 99
Query: 61 --NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA--------GASLDVGVI 110
M+M RP+ T V+++ ++ L QG +HA ++A + L GV+
Sbjct: 100 LSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVL 159
Query: 111 --SSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM-EQK 167
++L+ MY++CG L + + F + V WS++I + + +A LF+ M Q
Sbjct: 160 LGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQG 219
Query: 168 EFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDE 227
+ + S L AC+ G + L+ K L ++ + + G +D+
Sbjct: 220 LCFLSPTSIASALRACASLDHLRMGEQLHALLAKS-GVHADLTAGNSLLSMYAKAGLIDQ 278
Query: 228 AAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQ-DAAPYVLL 281
A AL M VK + + + L+S + + A + +++ N + DAA V L
Sbjct: 279 AIALFDEMAVK-DTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSL 332
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 83/190 (43%), Gaps = 12/190 (6%)
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P+ TF + +CS LA G+ IH + AG D+ V ++L+ MY +C CL D+
Sbjct: 8 PNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHI 67
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAIN--LFEQMEQKEFEANDVTFVSLLYACSHCG 187
F D+V W++M+A Y HG A+ L QM+ N T V+LL + G
Sbjct: 68 FATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQG 127
Query: 188 LKEKGMEFFDLMVKKYRRKPRLEHY---------TCVVDLLGRCGYLDEAAALIRNMPVK 238
+G ++ R T ++D+ +CG L A + MP +
Sbjct: 128 ALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPAR 187
Query: 239 ANAIIWKTLL 248
N + W L+
Sbjct: 188 -NEVTWSALI 196
>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 631
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 180/449 (40%), Positives = 267/449 (59%), Gaps = 25/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+E D+ G++L MY K G +V+ V + R+ + W +++A AQNG ++ L
Sbjct: 189 GWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQNGHPDESLSLC 248
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G RP + T V+VISS +++A L G++IH + G + V ++LI MY++C
Sbjct: 249 CEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYNDKVKTALIDMYAKC 308
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + F VV W+++I Y HG EA++LFE+M KE + + +TFV L
Sbjct: 309 GSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFERM-MKEAQPDHITFVGAL 367
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACS L ++G ++LMV+ R P +EHYTC+VDLLG CG LDEA LIR M V +
Sbjct: 368 AACSRGRLLDEGRALYNLMVRDCRINPTVEHYTCMVDLLGHCGQLDEAYDLIRQMDVMPD 427
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+ +W LL++CKTH + ++A E+++ + P D+ YV+L+N++A + +W+GV+ R+
Sbjct: 428 SGVWGALLNSCKTHGNVELAEVALEKLIELEPDDSGNYVILANMYAQSGKWEGVARLRQL 487
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M ++ +KK SW+E+KN+V+ F GD SHP S I L+ L M+ GYVPDTG+
Sbjct: 488 MIDKGIKKNIACSWIEVKNKVYAFLSGDVSHPNSGAIYAELKRLEGLMREAGYVPDTGSV 547
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
HD++ +EK + HSE+LAIAF GLI LP K+IS
Sbjct: 548 FHDVEEDEKTDMVCSHSERLAIAF-----GLISTLPGTRLLITKNLRICEDCHVAIKFIS 602
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+I REI VRD +R+HHFR+G CSCGDYW
Sbjct: 603 KITEREITVRDVNRYHHFRHGLCSCGDYW 631
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 133/273 (48%), Gaps = 12/273 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +L + L + Y SL + +P N+ W LI A NG E + Y
Sbjct: 88 GIAYNLDLATKLVNFYSVCNSLRNAHHLFDKIPKGNLFLWNVLIRAYAWNGPHETAISLY 147
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M G +PD T V+ +CS L+T+G+G+ IH V+++G DV V ++L+ MY++C
Sbjct: 148 HQMLEYGLKPDNFTLPFVLKACSALSTIGEGRVIHERVIRSGWERDVFVGAALVDMYAKC 207
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
GC+ D+ F + D VLW+SM+AAY +G +E+++L +M K + T V+++
Sbjct: 208 GCVVDARHVFDKIVDRDAVLWNSMLAAYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVI 267
Query: 181 YACSHCGLKEKGMEFFDLMVK---KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
+ + G E + +Y K + T ++D+ +CG + A L +
Sbjct: 268 SSSADIACLPHGREIHGFGWRHGFQYNDKVK----TALIDMYAKCGSVKVACVLFERLRE 323
Query: 238 KANAIIWKTLLSACKTH----KSTDMAGRIAEE 266
K + W +++ H ++ D+ R+ +E
Sbjct: 324 K-RVVSWNAIITGYAMHGLAVEALDLFERMMKE 355
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 116/238 (48%), Gaps = 6/238 (2%)
Query: 49 QNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVG 108
A ++ Q+ + + + S++ SC L G+Q+HA + + G + ++
Sbjct: 35 HQSFATQLIPQHKVDSFPSSPSNHYYYASLLESCISAKALEPGKQLHARLCQLGIAYNLD 94
Query: 109 VISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE 168
+ + L++ YS C L ++ F + ++ LW+ +I AY ++G E AI+L+ QM +
Sbjct: 95 LATKLVNFYSVCNSLRNAHHLFDKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYG 154
Query: 169 FEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDE 227
+ ++ T +L ACS +G + +++ + R + +VD+ +CG + +
Sbjct: 155 LKPDNFTLPFVLKACSALSTIGEGRVIHERVIRSGWERDVFVG--AALVDMYAKCGCVVD 212
Query: 228 AAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSN 283
A + + V +A++W ++L+A + D + + E+ GV P +A ++S+
Sbjct: 213 ARHVFDKI-VDRDAVLWNSMLAAYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISS 269
>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
Length = 936
Score = 342 bits (878), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 173/435 (39%), Positives = 262/435 (60%), Gaps = 14/435 (3%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+SL +MY K+G L E +++ M + + AW LI G A +G + + L+ Y +++
Sbjct: 502 TSLVNMYAKAGELDVAEVILQEMDEQQITAWNVLINGYALHGRSREALEAYQKLQLEAIP 561
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
DK+TF+SV+++C+ +L +G+ IH+ V+ G DV V ++L +MYS+CG ++++ +
Sbjct: 562 VDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRI 621
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F V W+ M+ AY HG+ EE + L +MEQ+ + N +TFVS+L +CSH GL
Sbjct: 622 FDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLI 681
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
+G ++F + + + EHY C+VDLLGR G L EA I MP++ + W +LL
Sbjct: 682 AEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPLEPGIVTWASLLG 741
Query: 250 ACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKE 309
AC+ K D A ++L ++P +++ V+LSNI++ W+ ++ R AM R VKK
Sbjct: 742 ACRVQKDLDRGKLAAGKLLELDPGNSSASVVLSNIYSERGDWKNAAKLRRAMASRRVKKV 801
Query: 310 PGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEK 369
PG+S +++KN+VH+F + D SHPR+ EI +EEL M+ GYVPDT +HD+D E+K
Sbjct: 802 PGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELCFAMREAGYVPDTKMVLHDVDEEQK 861
Query: 370 EYNLKHHSEKLAIAFA----EHTRGLIVM----------LPFKYISEIKNREIIVRDASR 415
E L +HSEKLAIAF T L + K+IS+I REI+VRD R
Sbjct: 862 ESLLAYHSEKLAIAFGLISTPETSSLHIFKNLRVCEDCHTATKFISKITGREIVVRDNHR 921
Query: 416 FHHFRNGKCSCGDYW 430
FHHFR+G CSC DYW
Sbjct: 922 FHHFRDGSCSCKDYW 936
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 140/273 (51%), Gaps = 8/273 (2%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
LD+ ++L + Y K GSL + KV MP R+V W ++I+ + + + + + M
Sbjct: 193 LDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRM 252
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
+ G R D++TF+S++ +C TL G+ + + + LD+ V ++LI+MY+RC
Sbjct: 253 QQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSP 312
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA- 182
+D+ + F + ++++ WS++I A+ HG EA+ F M+Q+ N VTF+SLL
Sbjct: 313 EDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGF 372
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
+ GL+E + L++ ++ +V++ GRC D+A + + + N I
Sbjct: 373 TTPSGLEE--LSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLEL-PNLI 429
Query: 243 IWKTLLS---ACKTHKSTDMAGRIAEEILGVNP 272
W +++ C+ H R ++ G+ P
Sbjct: 430 SWNSMIGIYVQCERHDDALQLFRTMQQ-QGIQP 461
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 136/255 (53%), Gaps = 3/255 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDV-LDQ 59
GF + + ++L +MY K G+L++ + V M +NV+ W ++ + G + ++
Sbjct: 88 GFFQNTLVATALLNMYGKCGTLLDAQSVFEEMAEKNVVTWNAMLGVYSLQGCCWKLAVEL 147
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ M + G + + ITF++V++S + L +G+ IH+ V ++ SLDV V ++L++ Y++
Sbjct: 148 FTRMLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTK 207
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG L D+ K F V W+SMI+AY + EA +F++M+Q+ + VTF+S+
Sbjct: 208 CGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQQEGERCDRVTFLSI 267
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L AC + + G + + + + L T ++ + RC ++AA + M +
Sbjct: 268 LDACVNPETLQHGKHVRE-SISETSFELDLFVGTALITMYARCRSPEDAAQVFGRMK-QT 325
Query: 240 NAIIWKTLLSACKTH 254
N I W +++A H
Sbjct: 326 NLITWSAIITAFADH 340
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 141/288 (48%), Gaps = 3/288 (1%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
FELDL G++L MY + S + +V M N+I W +I A +G + L +
Sbjct: 292 FELDLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFR 351
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
+M+ G P+++TF+S+++ + + L + +IH + + G + ++L+++Y RC
Sbjct: 352 MMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCE 411
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
DD+ F + E +++ W+SMI Y + ++A+ LF M+Q+ + + V F+++L
Sbjct: 412 SPDDARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILG 471
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
AC+ G + + V++ T +V++ + G LD A +++ M +
Sbjct: 472 ACT-IGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMD-EQQI 529
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEI-LGVNPQDAAPYVLLSNIHASA 288
W L++ H + A +++ L P D ++ + N S+
Sbjct: 530 TAWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSS 577
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 120/237 (50%), Gaps = 3/237 (1%)
Query: 15 MYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKIT 74
MY + GSL + + RNV++W +I+ + ++ L ++ M + G P+ IT
Sbjct: 1 MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
V+V++SC L G +HA ++ G + V ++L++MY +CG L D+ F E
Sbjct: 61 LVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMA 120
Query: 135 YSDVVLWSSMIAAYGFHGKG-EEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGM 193
+VV W++M+ Y G + A+ LF +M + +AN +TF+++L + KG
Sbjct: 121 EKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKG- 179
Query: 194 EFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+F V++ + T +V+ +CG L +A + MP ++ W +++SA
Sbjct: 180 KFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVG-TWNSMISA 235
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 77/149 (51%), Gaps = 2/149 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + D++ ++L +MY K GS+ ++ MPIR+ ++W ++ AQ+G +E+VL
Sbjct: 594 GLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLI 653
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQG-QQIHAEVVKAGASLDVGVISSLISMYSR 119
M G + + ITFVSV+SSCS + +G Q H+ G + L+ + R
Sbjct: 654 RKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGR 713
Query: 120 CGCLDDSVKTFLECEYSD-VVLWSSMIAA 147
G L ++ K + +V W+S++ A
Sbjct: 714 AGKLQEAEKYISKMPLEPGIVTWASLLGA 742
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 170/444 (38%), Positives = 269/444 (60%), Gaps = 15/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E++ SL MY K G + + + M N+I W +I+G A+NG A + +D +
Sbjct: 252 GLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMF 311
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M RPD I+ S IS+C+++ +L Q + ++ V ++ DV + S+LI M+++C
Sbjct: 312 HEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKC 371
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ + F DVV+WS+MI YG HG+ EAI+L+ ME+ NDVTF+ LL
Sbjct: 372 GSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLL 431
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+H G+ +G FF+ M ++ P+ +HY CV+DLLGR G+LD+A +I+ MPV+
Sbjct: 432 MACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPG 490
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+W LLSACK H+ ++ A+++ ++P + YV LSN++A+A+ W V+E R
Sbjct: 491 VTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVR 550
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+E+ + K+ G SW+E++ ++ F +GDKSHPR EI+ +E + S +K G+V + A
Sbjct: 551 MKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDAS 610
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA----------EHTRGLIVML----PFKYISEIKNR 406
+HD++ EE E L HSE++AIA+ T+ L + K IS++ +R
Sbjct: 611 LHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDR 670
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EI+VRD +RFHHF++G CSCGDYW
Sbjct: 671 EIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 150/286 (52%), Gaps = 8/286 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPI--RNVIAWITLIAGKAQNGLAEDVLD 58
GF+ D+ + L +Y K L V +P+ R +++W +++ AQNG + L+
Sbjct: 149 GFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALE 208
Query: 59 QYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
++ MR + +PD + VSV+++ + L L QG+ IHA VVK G ++ ++ SL +MY+
Sbjct: 209 IFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYA 268
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+CG + + F + + +++LW++MI+ Y +G EAI++F +M K+ + ++ S
Sbjct: 269 KCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITS 328
Query: 179 LLYACSHCGLKEKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
+ AC+ G E+ ++ + + YR + + ++D+ +CG + E A L+ + +
Sbjct: 329 AISACAQVGSLEQARSMYEYVGRSDYRDDVFIS--SALIDMFAKCGSV-EGARLVFDRTL 385
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRI--AEEILGVNPQDAAPYVLL 281
+ ++W ++ H A + A E GV+P D LL
Sbjct: 386 DRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLL 431
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 118/244 (48%), Gaps = 6/244 (2%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+ L H G + +V +P + W +I G ++N +D L Y+ M++
Sbjct: 57 TKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVS 116
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
PD TF ++ +CS L+ L G+ +HA+V + G DV V + LI++Y++C L +
Sbjct: 117 PDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTV 176
Query: 130 F--LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCG 187
F L +V W+++++AY +G+ EA+ +F QM + + + + V VS+L A +
Sbjct: 177 FEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQ 236
Query: 188 LKEKGMEFFDLMVK-KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKT 246
++G +VK +P L + + +CG + A L M N I+W
Sbjct: 237 DLKQGRSIHASVVKMGLEIEPDL--LISLNTMYAKCGQVATAKILFDKMK-SPNLILWNA 293
Query: 247 LLSA 250
++S
Sbjct: 294 MISG 297
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 181/444 (40%), Positives = 264/444 (59%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G DL AG+SL MY K+G + + + M +++ +++ L++G QNG AE+ +
Sbjct: 370 GVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVF 429
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ PD T VS+I +CS LA L G+ H V+ G + + + ++LI MY++C
Sbjct: 430 KKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKC 489
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +D S + F D+V W++MIA YG HG G+EA LF +M F + VTF+ LL
Sbjct: 490 GRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLL 549
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL +G +F +M Y PR+EHY C+VDLL R G+LDEA I++MP++A+
Sbjct: 550 SACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRAD 609
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+W LL AC+ +K+ D+ +++ I + P+ +VLLSNI+++A R+ +E R
Sbjct: 610 VRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRII 669
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
+ + KK PG SW+EI +H F GD+SHP+S EI L+ + +K GY PDT
Sbjct: 670 QKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFV 729
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEH----------TRGLIVM----LPFKYISEIKNR 406
+ D++ EEKE L HSEKLAIA+ T+ L V K+IS +K R
Sbjct: 730 LQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHISLVKRR 789
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
IIVRDA+RFHHF+NG+CSCGD+W
Sbjct: 790 AIIVRDANRFHHFKNGQCSCGDFW 813
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 134/280 (47%), Gaps = 11/280 (3%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G++L MY K GSL+ +V MP RN + W LI G + M G
Sbjct: 276 GTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGL 335
Query: 69 ---RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD 125
P I S + +C+ L L G+Q+HA + K+G D+ +SL+SMY++ G +D
Sbjct: 336 CFLSPTSIA--SALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQ 393
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
++ F E D V +S++++ Y +G+ EEA +F++M+ E + T VSL+ ACSH
Sbjct: 394 AIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSH 453
Query: 186 CGLKEKG-MEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
+ G ++++ + + ++D+ +CG +D + + MP + + + W
Sbjct: 454 LAALQHGRCSHGSVIIRGLASETSI--CNALIDMYAKCGRIDLSRQVFNMMPSR-DIVSW 510
Query: 245 KTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLS 282
T+++ H A + E+ LG P LLS
Sbjct: 511 NTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLS 550
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 103/246 (41%), Gaps = 14/246 (5%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNG--LAEDVLDQYNLMRMVGFRPDKI 73
++ SG L + +P +V + LI + + A D L Y M P+
Sbjct: 67 HIASGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNY 126
Query: 74 TFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLEC 133
TF + +CS LA G+ IH + AG D+ V ++L+ MY +C CL D+ F
Sbjct: 127 TFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATM 186
Query: 134 EYSDVVLWSSMIAAYGFHGKGEEAIN--LFEQMEQKEFEANDVTFVSLLYACSHCGLKEK 191
D+V W++M+A Y HG A+ L QM+ N T V+LL + G +
Sbjct: 187 PARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQ 246
Query: 192 GMEFFDLMVKKYRRKPRLEHY---------TCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
G ++ R T ++D+ +CG L A + MP + N +
Sbjct: 247 GTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPAR-NEV 305
Query: 243 IWKTLL 248
W L+
Sbjct: 306 TWSALI 311
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 121/262 (46%), Gaps = 15/262 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + DL ++L MY+K L + + MP R+++AW ++AG A +G+ +
Sbjct: 155 GLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHL 214
Query: 61 --NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA--------GASLDVGVI 110
M+M RP+ T V+++ ++ L QG +HA ++A + L GV+
Sbjct: 215 LSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVL 274
Query: 111 --SSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM-EQK 167
++L+ MY++CG L + + F + V WS++I + + +A LF+ M Q
Sbjct: 275 LGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQG 334
Query: 168 EFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDE 227
+ + S L AC+ G + L+ K L ++ + + G +D+
Sbjct: 335 LCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHA-DLTAGNSLLSMYAKAGLIDQ 393
Query: 228 AAALIRNMPVKANAIIWKTLLS 249
A AL M VK + + + L+S
Sbjct: 394 AIALFDEMAVK-DTVSYSALVS 414
>gi|15235537|ref|NP_195454.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
gi|75213666|sp|Q9SZT8.1|PP354_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g37380, chloroplastic; Flags: Precursor
gi|4468804|emb|CAB38205.1| putative protein [Arabidopsis thaliana]
gi|7270720|emb|CAB80403.1| putative protein [Arabidopsis thaliana]
gi|332661386|gb|AEE86786.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
Length = 632
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 171/449 (38%), Positives = 272/449 (60%), Gaps = 26/449 (5%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E LV+ +++ Y K G++ + M R++++W +I G AQ+G D L +
Sbjct: 189 ERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQK 248
Query: 63 MRMVG-FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
+ G +PD+IT V+ +S+CS++ L G+ IH V + L+V V + LI MYS+CG
Sbjct: 249 LLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCG 308
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQ-KEFEANDVTFVSLL 180
L+++V F + D+V W++MIA Y HG ++A+ LF +M+ + D+TF+ L
Sbjct: 309 SLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTL 368
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+H GL +G+ F+ M ++Y KP++EHY C+V LLGR G L A I+NM + A+
Sbjct: 369 QACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDAD 428
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+++W ++L +CK H + IAE ++G+N +++ YVLLSNI+AS ++GV++ R
Sbjct: 429 SVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNL 488
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+E+ + KEPG+S +EI+N+VH+F GD+ H +S EI L +++ +K GYVP+T
Sbjct: 489 MKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTV 548
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
+ D++ EKE +L+ HSE+LAIA+ GLI P K IS
Sbjct: 549 LQDLEETEKEQSLQVHSERLAIAY-----GLISTKPGSPLKIFKNLRVCSDCHTVTKLIS 603
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+I R+I++RD +RFHHF +G CSCGD+W
Sbjct: 604 KITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 129/296 (43%), Gaps = 43/296 (14%)
Query: 50 NGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV 109
NGL + Y + P++ TF S++ SCS + G+ IH V+K G +D V
Sbjct: 108 NGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKS----GKLIHTHVLKFGLGIDPYV 163
Query: 110 ISSLISMYSRCGCLDDSVKTFLE--------------------------------CEYSD 137
+ L+ +Y++ G + + K F CE D
Sbjct: 164 ATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCE-RD 222
Query: 138 VVLWSSMIAAYGFHGKGEEAINLFEQ-MEQKEFEANDVTFVSLLYACSHCGLKEKGMEFF 196
+V W+ MI Y HG +A+ LF++ + + + + +++T V+ L ACS G E G +
Sbjct: 223 IVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETG-RWI 281
Query: 197 DLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKS 256
+ VK R + ++ T ++D+ +CG L+EA + + P K + + W +++ H
Sbjct: 282 HVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRK-DIVAWNAMIAGYAMHGY 340
Query: 257 TDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRW---QGVSEFREAMRERNVKKE 309
+ A R+ E+ G+ + + A A +G+ F +E +K +
Sbjct: 341 SQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPK 396
>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
Length = 913
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 182/442 (41%), Positives = 268/442 (60%), Gaps = 16/442 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVI-RLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
D G++L Y K G + E EK+ R+ R+ ++W ++I+G N L +D M
Sbjct: 472 DTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFM 531
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
G R D TF +++S+C+ +ATL +G ++HA ++A DV V S+L+ MYS+CG +
Sbjct: 532 MQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRI 591
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
D + + F +V W+SMI+ Y HG GE+A+ LF +M + VTFV +L AC
Sbjct: 592 DYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSAC 651
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
SH G E+G E F M + YR PR+EH++C+VDLLGR G LDE I +MP+K N +I
Sbjct: 652 SHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLI 711
Query: 244 WKTLLSAC--KTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
W+T+L AC ++T++ R AE +L + PQ+A YVLL+N++AS ++W+ V++ R AM
Sbjct: 712 WRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARTAM 771
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
+E VKKE G SW+ +K+ VH F GDK HP I L EL +M+ GY+P T +
Sbjct: 772 KEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDLIYDKLRELNRKMRDAGYIPQTKYAL 831
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVML-------------PFKYISEIKNREI 408
D++ E KE L +HSEK+A+AF + + + F YIS+I R+I
Sbjct: 832 FDLELENKEELLSYHSEKIAVAFVLTRQSALPIRIMKNLRVCGDCHSAFGYISKIVGRQI 891
Query: 409 IVRDASRFHHFRNGKCSCGDYW 430
++RD++RFHHF +GKCSCGDYW
Sbjct: 892 VLRDSNRFHHFEDGKCSCGDYW 913
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 145/305 (47%), Gaps = 36/305 (11%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM----- 63
G+ L +MY KSG++ + V LM ++ ++W +LI+G QN +ED + ++LM
Sbjct: 343 GNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMFSLMPEYDQ 402
Query: 64 ----RMVGFRPD-----------------------KITFVSVISSCSELATLGQGQQIHA 96
++G D ++TF++++S+ S L+ QIHA
Sbjct: 403 VSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHA 462
Query: 97 EVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLE-CEYSDVVLWSSMIAAYGFHGKGE 155
V+K S D + ++L+S Y +CG +++ K F E D V W+SMI+ Y +
Sbjct: 463 LVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLH 522
Query: 156 EAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV 215
+A++L M QK + TF ++L AC+ E+GME ++ + + +
Sbjct: 523 KAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVG-SAL 581
Query: 216 VDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRI-AEEILGVNPQD 274
VD+ +CG +D A+ MP++ N W +++S H + A ++ +L P D
Sbjct: 582 VDMYSKCGRIDYASRFFELMPLR-NVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPD 640
Query: 275 AAPYV 279
+V
Sbjct: 641 HVTFV 645
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 129/271 (47%), Gaps = 14/271 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF +L ++L ++Y++ G L +K+ M RN++ W LI+G QNG ++ ++
Sbjct: 129 GFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARF 188
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLG--QGQQIHAEVVKAGASLDVGVISSLISMYS 118
M GF P+ F S + +C E G G QIH + K DV V + LISMY
Sbjct: 189 RDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYG 248
Query: 119 RC-GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQK----EFEAND 173
C +D+ F + + W+S+I+ Y G A +LF M+++ F+ ND
Sbjct: 249 SCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPND 308
Query: 174 V-TFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALI 232
+ S+L + KG E +++ ++ +V++ + G + +A ++
Sbjct: 309 AFSEFSVLEEG-----RRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVF 363
Query: 233 RNMPVKANAIIWKTLLSACKTHKSTDMAGRI 263
M V+ +++ W +L+S ++ ++ A +
Sbjct: 364 ELM-VEKDSVSWNSLISGLDQNECSEDAAEM 393
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 82/151 (54%), Gaps = 8/151 (5%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
E D+V GS+L MY K G + + LMP+RNV +W ++I+G A++G E L +
Sbjct: 571 LESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFT 630
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQ---IHAEVVKAGASLDVGVISSLISMYS 118
M + G PD +TFV V+S+CS + + +G + +EV + S V S ++ +
Sbjct: 631 RMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYR--LSPRVEHFSCMVDLLG 688
Query: 119 RCGCLDDSVKTFLEC--EYSDVVLWSSMIAA 147
R G LD+ V F+ +V++W +++ A
Sbjct: 689 RAGKLDE-VGDFINSMPMKPNVLIWRTVLGA 718
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 120/285 (42%), Gaps = 45/285 (15%)
Query: 5 DLVAGSSLAHMYMKS-GSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
D+V + L MY S + V + IRN I+W ++I+ ++ G A D ++ M
Sbjct: 236 DVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSM 295
Query: 64 RMVG----FRP-DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLD-VGVISSLISMY 117
+ G F+P D + SV+ +G+++HA V++ G + + V + + L++MY
Sbjct: 296 QKEGLGFSFKPNDAFSEFSVLEEGRR-----KGREVHAHVIRTGLNDNKVAIGNGLVNMY 350
Query: 118 SRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFE--------------- 162
++ G + D+ F D V W+S+I+ + E+A +F
Sbjct: 351 AKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMFSLMPEYDQVSWNSVIG 410
Query: 163 -----------------QMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRR 205
QM + + + VTF+++L A S L E + L V KY
Sbjct: 411 ALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHAL-VLKYCL 469
Query: 206 KPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
++ G+CG ++E + M + + W +++S
Sbjct: 470 SDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISG 514
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 103/216 (47%), Gaps = 21/216 (9%)
Query: 74 TFVSVI-----SSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
TF S+I S CSE + +++H + +K G ++ + ++LI++Y R G L + K
Sbjct: 101 TFESLINRYQGSCCSE-----EARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQK 155
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F E ++V W+ +I+ Y +GK +EA F M + F N F S L AC G
Sbjct: 156 LFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGP 215
Query: 189 K--EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRC-GYLDEAAALIRNMPVKANAIIWK 245
+ G++ L + K R + ++ + G C ++A ++ + ++ N+I W
Sbjct: 216 SGCKLGVQIHGL-ISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIR-NSISWN 273
Query: 246 TLLSACKTH----KSTDMAGRIAEEILGVN--PQDA 275
+++S + D+ + +E LG + P DA
Sbjct: 274 SIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNDA 309
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 177/444 (39%), Positives = 265/444 (59%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + ++ ++L +Y K G L K+ +P RN + W T+I G Q+G + L Y
Sbjct: 273 GLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLY 332
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M + ++T+ SV+ +C+ LA + G QIH+ +K DV V ++LI MY++C
Sbjct: 333 KNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKC 392
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + ++ F D + W++MI+ Y HG EA+ F+ M++ E N +TFVS+L
Sbjct: 393 GSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSIL 452
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACS+ GL + G +F MV+ Y +P +EHYTC+V LLGR G+LD+A LI +P++ N
Sbjct: 453 SACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPN 512
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+W+ LL AC H D+ A++IL ++PQD A +VLLSNI+A +RW V+ R+
Sbjct: 513 VKVWRALLGACVIHNDVDLGIMSAQQILQIDPQDEATHVLLSNIYARTRRWNSVASVRKF 572
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+ + VKKEPG+SW+E + VH F++GD SHP I LE L + + GYVPD A
Sbjct: 573 MKNKGVKKEPGLSWIENQGIVHYFSVGDTSHPDMKMISGMLEWLNMKTEKAGYVPDLNAV 632
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA---EHTRGLIVML-----------PFKYISEIKNR 406
+ D++ +EK+ +L HSE+LA+AF +RG I +L K IS+I R
Sbjct: 633 LRDVEDDEKKRHLWVHSERLALAFGLIRTPSRGHIRILKNLRICTDCHSAIKLISKIVQR 692
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
+II+RD +RFHHF++G CSCGDYW
Sbjct: 693 DIIIRDMNRFHHFQDGICSCGDYW 716
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 141/253 (55%), Gaps = 2/253 (0%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
+E+DL G L +Y K G + +V MP +VI W +I+ AQ+ + + ++ +
Sbjct: 173 YEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFG 232
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
MR P++ TF SV+ SC+ + L G+Q+H V+K G +V V ++L+ +Y++CG
Sbjct: 233 QMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCG 292
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
LD+S+K F+E + V W++MI Y G G++A++L++ M + + +A++VT+ S+L
Sbjct: 293 RLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLR 352
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
AC+ E G + L +K K + ++D+ +CG + + A L+ +M + +
Sbjct: 353 ACASLAAMELGTQIHSLSLKTIYDKDVVVG-NALIDMYAKCGSI-KNARLVFDMLSERDE 410
Query: 242 IIWKTLLSACKTH 254
I W ++S H
Sbjct: 411 ISWNAMISGYSMH 423
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 121/248 (48%), Gaps = 2/248 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E + G++L Y GS+ + + +++++W ++A A+N +D L +
Sbjct: 71 GHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDRFQDSLQLF 130
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
MRMVGF P+ TF V+ +C L G+ +H V+K +D+ V L+ +Y++
Sbjct: 131 AEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKF 190
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +D ++ F E DV+ WS MI+ Y + EA+ LF QM + N TF S+L
Sbjct: 191 GDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVL 250
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
+C+ + G + V K + ++D+ +CG LD + L +P + N
Sbjct: 251 QSCASIENLQLGKQ-VHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNR-N 308
Query: 241 AIIWKTLL 248
+ W T++
Sbjct: 309 EVTWNTMI 316
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 108/229 (47%), Gaps = 24/229 (10%)
Query: 32 MPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVIS-----SCSELA 86
MP RN ++++TLI G Q+ ++V+D ++ + G + F +++ C+ELA
Sbjct: 1 MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60
Query: 87 TLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIA 146
+HA + K G + V ++LI Y+ CG ++ + + F D+V W+ M+A
Sbjct: 61 -----YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVA 115
Query: 147 AYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDL------MV 200
Y + + ++++ LF +M F N TF +L AC G+E F + V
Sbjct: 116 CYAENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACI-------GLEAFSVGKSVHGCV 168
Query: 201 KKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
K + L ++DL + G ++ + MP K + I W ++S
Sbjct: 169 LKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMP-KHDVIPWSFMIS 216
>gi|356538057|ref|XP_003537521.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Glycine max]
Length = 611
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 180/447 (40%), Positives = 255/447 (57%), Gaps = 25/447 (5%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
L+ ++ +++ Y +SG E ++ R P RN+ AW LI+G Q+G D + M
Sbjct: 170 LNSISWTTMISGYARSGRKFEAFRLFRQTPYRNLFAWTALISGLVQSGNGVDAFHLFVEM 229
Query: 64 RMVGFR-PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
R G D + SV+ +C+ LA G+Q+H V+ G + + ++LI MY++C
Sbjct: 230 RHEGISVTDPLVLSSVVGACANLALWELGKQMHGVVITLGYESCLFISNALIDMYAKCSD 289
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
L + F E DVV W+S+I HG+ EEA+ L+++M + N+VTFV L++A
Sbjct: 290 LVAAKYIFCEMCRKDVVSWTSIIVGTAQHGQAEEALALYDEMVLAGVKPNEVTFVGLIHA 349
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
CSH GL KG F MV+ + P L+HYTC++DL R G+LDEA LIR MPV +
Sbjct: 350 CSHAGLVSKGRTLFRTMVEDHGISPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVNPDEP 409
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMR 302
W LLS+CK H +T MA RIA+ +L + P+D + Y+LLSNI+A A W+ VS+ R+ M
Sbjct: 410 TWAALLSSCKRHGNTQMAVRIADHLLNLKPEDPSSYILLSNIYAGAGMWEDVSKVRKLMM 469
Query: 303 ERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMH 362
KK PG S +++ H F G+ SHP EI + EL EM+ RGY PDT + +H
Sbjct: 470 TLEAKKAPGYSCIDLGKGSHVFYAGETSHPMRDEIIGLMRELDEEMRKRGYAPDTSSVLH 529
Query: 363 DMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEI 403
DMD +EKE L HSE+LA+A+ GL+ +P K IS I
Sbjct: 530 DMDQQEKERQLFWHSERLAVAY-----GLLKAVPGTVIRIVKNLRVCGDCHTVLKLISAI 584
Query: 404 KNREIIVRDASRFHHFRNGKCSCGDYW 430
NREI VRDA R+HHF++G CSC D+W
Sbjct: 585 TNREIYVRDAKRYHHFKDGNCSCNDFW 611
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 143/339 (42%), Gaps = 50/339 (14%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L + Y K G + + ++ +P R+ +AW +L+ + L + GF
Sbjct: 42 NTLLNAYGKCGLIQDALQLFDALPRRDPVAWASLLTACNLSNRPHRALSISRSLLSTGFH 101
Query: 70 PDKITFVSVISSCSELATL--GQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD--- 124
PD F S++ +C+ L L QG+Q+HA + S D V SSLI MY++ G D
Sbjct: 102 PDHFVFASLVKACANLGVLHVKQGKQVHARFFLSPFSDDDVVKSSLIDMYAKFGLPDYGR 161
Query: 125 ---DSVKT-------------------------FLECEYSDVVLWSSMIAAYGFHGKGEE 156
DS+ + F + Y ++ W+++I+ G G +
Sbjct: 162 AVFDSISSLNSISWTTMISGYARSGRKFEAFRLFRQTPYRNLFAWTALISGLVQSGNGVD 221
Query: 157 AINLFEQMEQKEFEAND-VTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC- 214
A +LF +M + D + S++ AC++ L E G + +++ L + +C
Sbjct: 222 AFHLFVEMRHEGISVTDPLVLSSVVGACANLALWELGKQMHGVVIT-------LGYESCL 274
Query: 215 -----VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL- 268
++D+ +C L A + M + + + W +++ H + A + +E++
Sbjct: 275 FISNALIDMYAKCSDLVAAKYIFCEM-CRKDVVSWTSIIVGTAQHGQAEEALALYDEMVL 333
Query: 269 -GVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNV 306
GV P + L+ + +G + FR + + +
Sbjct: 334 AGVKPNEVTFVGLIHACSHAGLVSKGRTLFRTMVEDHGI 372
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 113/218 (51%), Gaps = 7/218 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+E L ++L MY K LV + + M ++V++W ++I G AQ+G AE+ L Y
Sbjct: 269 GYESCLFISNALIDMYAKCSDLVAAKYIFCEMCRKDVVSWTSIIVGTAQHGQAEEALALY 328
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVK-AGASLDVGVISSLISMYSR 119
+ M + G +P+++TFV +I +CS + +G+ + +V+ G S + + L+ ++SR
Sbjct: 329 DEMVLAGVKPNEVTFVGLIHACSHAGLVSKGRTLFRTMVEDHGISPSLQHYTCLLDLFSR 388
Query: 120 CGCLDDSVKTFLECEYS-DVVLWSSMIAAYGFHGKGEEAINLFEQ-MEQKEFEANDVTFV 177
G LD++ + D W++++++ HG + A+ + + + K + + +
Sbjct: 389 SGHLDEAENLIRTMPVNPDEPTWAALLSSCKRHGNTQMAVRIADHLLNLKPEDPSSYILL 448
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV 215
S +YA + G+ E + LM+ +K Y+C+
Sbjct: 449 SNIYAGA--GMWEDVSKVRKLMMTLEAKKA--PGYSCI 482
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 82/172 (47%), Gaps = 24/172 (13%)
Query: 91 GQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGF 150
+++HA+++KAG + + ++L++ Y +CG + D+++ F D V W+S++ A
Sbjct: 22 AKKLHAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDALPRRDPVAWASLLTACNL 81
Query: 151 HGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL------KEKGMEFF------DL 198
+ A+++ + F + F SL+ AC++ G+ K+ FF D
Sbjct: 82 SNRPHRALSISRSLLSTGFHPDHFVFASLVKACANLGVLHVKQGKQVHARFFLSPFSDDD 141
Query: 199 MVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+VK + ++D+ + G D A+ ++ N+I W T++S
Sbjct: 142 VVK-----------SSLIDMYAKFGLPDYGRAVFDSIS-SLNSISWTTMISG 181
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 181/444 (40%), Positives = 264/444 (59%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G DL AG+SL MY K+G + + + M +++ +++ L++G QNG AE+ +
Sbjct: 370 GVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVF 429
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ PD T VS+I +CS LA L G+ H V+ G + + + ++LI MY++C
Sbjct: 430 KKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKC 489
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +D S + F D+V W++MIA YG HG G+EA LF +M F + VTF+ LL
Sbjct: 490 GRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLL 549
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL +G +F +M Y PR+EHY C+VDLL R G+LDEA I++MP++A+
Sbjct: 550 SACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRAD 609
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+W LL AC+ +K+ D+ +++ I + P+ +VLLSNI+++A R+ +E R
Sbjct: 610 VRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRII 669
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
+ + KK PG SW+EI +H F GD+SHP+S EI L+ + +K GY PDT
Sbjct: 670 QKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFV 729
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEH----------TRGLIVM----LPFKYISEIKNR 406
+ D++ EEKE L HSEKLAIA+ T+ L V K+IS +K R
Sbjct: 730 LQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHISLLKRR 789
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
IIVRDA+RFHHF+NG+CSCGD+W
Sbjct: 790 AIIVRDANRFHHFKNGQCSCGDFW 813
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 134/280 (47%), Gaps = 11/280 (3%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G++L MY K GSL+ +V MP RN + W LI G + M G
Sbjct: 276 GTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGL 335
Query: 69 ---RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD 125
P I S + +C+ L L G+Q+HA + K+G D+ +SL+SMY++ G +D
Sbjct: 336 CFLSPTSIA--SALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQ 393
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
++ F E D V +S++++ Y +G+ EEA +F++M+ E + T VSL+ ACSH
Sbjct: 394 AIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSH 453
Query: 186 CGLKEKG-MEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
+ G ++++ + + ++D+ +CG +D + + MP + + + W
Sbjct: 454 LAALQHGRCSHGSVIIRGLASETSI--CNALIDMYAKCGRIDLSRQVFNMMPSR-DIVSW 510
Query: 245 KTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLS 282
T+++ H A + E+ LG P LLS
Sbjct: 511 NTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLS 550
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 105/251 (41%), Gaps = 24/251 (9%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNG--LAEDVLDQYNLMRMVGFRPDKI 73
++ SG L + +P +V + LI + + A D L Y M P+
Sbjct: 67 HIASGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNY 126
Query: 74 TFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLEC 133
TF + +CS LA G+ IH + AG D+ V ++L+ MY +C CL D+ F
Sbjct: 127 TFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATM 186
Query: 134 EYSDVVLWSSMIAAYGFHGKGEEAIN--LFEQMEQKEFEANDVTFVSLLYACSHCGLKEK 191
D+V W++M+A Y HG A+ L QM+ N T V+LL + G +
Sbjct: 187 PARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQ 246
Query: 192 GMEFFDLMVKKYRRKPRLEHY--------------TCVVDLLGRCGYLDEAAALIRNMPV 237
G V YR + L T ++D+ +CG L A + MP
Sbjct: 247 GTS-----VHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPA 301
Query: 238 KANAIIWKTLL 248
+ N + W L+
Sbjct: 302 R-NEVTWSALI 311
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 121/262 (46%), Gaps = 15/262 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + DL ++L MY+K L + + MP R+++AW ++AG A +G+ +
Sbjct: 155 GLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHL 214
Query: 61 --NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA--------GASLDVGVI 110
M+M RP+ T V+++ ++ L QG +HA ++A + L GV+
Sbjct: 215 LSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYRIRACLHSNRNSKSKLTDGVL 274
Query: 111 --SSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM-EQK 167
++L+ MY++CG L + + F + V WS++I + + +A LF+ M Q
Sbjct: 275 LGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQG 334
Query: 168 EFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDE 227
+ + S L AC+ G + L+ K L ++ + + G +D+
Sbjct: 335 LCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHA-DLTAGNSLLSMYAKAGLIDQ 393
Query: 228 AAALIRNMPVKANAIIWKTLLS 249
A AL M VK + + + L+S
Sbjct: 394 AIALFDEMAVK-DTVSYSALVS 414
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 171/449 (38%), Positives = 265/449 (59%), Gaps = 24/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D +SL Y K + E K+ +++A+ ++I +Q G E+ L Y
Sbjct: 415 GIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLY 474
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ +PD S++++C+ L+ QG+Q+H +K G D+ +SL++MY++C
Sbjct: 475 LQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKC 534
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++D+ + F E +V WS+MI Y HG G+EA+ LF QM + N +T VS+L
Sbjct: 535 GSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVL 594
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+H GL +G ++F+ M + KP EHY C++DLLGR G L+EA L+ ++P +A+
Sbjct: 595 CACNHAGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSIPFEAD 654
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+W LL A + HK+ ++ + A+ + + P+ + +VLL+NI+ASA W+ V++ R+
Sbjct: 655 GFVWGALLGAARIHKNIELGQKAAKMLFDLEPEKSGTHVLLANIYASAGMWENVAKVRKF 714
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M++ VKKEPG+SW+EIK++V+ F +GD+SH RS EI L++L + GY D
Sbjct: 715 MKDSKVKKEPGMSWIEIKDKVYTFIVGDRSHSRSDEIYAKLDQLGDLLSKAGYSSIVEID 774
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
+H++D EKE L HHSEKLA+AF GLI P FK++
Sbjct: 775 IHNVDKSEKEKLLYHHSEKLAVAF-----GLIATPPGGPIRVKKNLRICVDCHTFFKFVC 829
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+I +REIIVRD +RFHHF++G CSCGDYW
Sbjct: 830 KIVSREIIVRDINRFHHFKDGSCSCGDYW 858
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 134/271 (49%), Gaps = 4/271 (1%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
DL A L MY K + + + MP +++IAW LI+G +Q G D + ++ M
Sbjct: 318 DLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMF 377
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
++ T +V+ S + L + +QIH +K+G D VI+SL+ Y +C +D
Sbjct: 378 SEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHID 437
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
++ K F E + D+V ++SMI AY +G GEEA+ L+ QM+ + + + SLL AC+
Sbjct: 438 EASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACA 497
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
+ E+G + + K+ + +V++ +CG +++A +P + + W
Sbjct: 498 NLSAYEQGKQ-LHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRG-IVSW 555
Query: 245 KTLLSACKTHKSTDMAGRIAEEIL--GVNPQ 273
++ H A R+ ++L GV P
Sbjct: 556 SAMIGGYAQHGHGKEALRLFNQMLRDGVPPN 586
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 140/273 (51%), Gaps = 10/273 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D + L +Y K K++ +V++W +L++G QNG E+ L +
Sbjct: 11 GFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGFVEEALLVF 70
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
N M ++G + ++ TF SV+ +CS L G+++H V G D V ++L+ MY++C
Sbjct: 71 NEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKC 130
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G LDDS + F +VV W+++ + Y EA+ LF++M + N+ + +L
Sbjct: 131 GLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIIL 190
Query: 181 YACSHCGLKEK--GMEFFDLMVKKYRRKPRLEHYT--CVVDLLGRCGYLDEAAALIRNMP 236
AC+ GL+E G + LM+K L+ ++ +VD+ + G ++ A A+ +++
Sbjct: 191 NACA--GLQEGDLGRKIHGLMLK---MGLDLDQFSANALVDMYSKAGEIEGAVAVFQDI- 244
Query: 237 VKANAIIWKTLLSACKTHKSTDMAGRIAEEILG 269
+ + W +++ C H D+A + +E+ G
Sbjct: 245 AHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKG 277
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 126/257 (49%), Gaps = 5/257 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE D ++L MY K G L + ++ + RNV++W L + Q+ L + + +
Sbjct: 112 GFESDGFVANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLF 171
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G P++ + ++++C+ L G++IH ++K G LD ++L+ MYS+
Sbjct: 172 KEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKA 231
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ +V F + + DVV W+++IA H + A+ L ++M+ N T S L
Sbjct: 232 GEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSAL 291
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+ G KE G + ++ K L +VD+ +C +D+A +MP K +
Sbjct: 292 KACAAMGFKELGRQLHSSLI-KMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMP-KKD 349
Query: 241 AIIWKTLLSA---CKTH 254
I W L+S C H
Sbjct: 350 IIAWNALISGYSQCGDH 366
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 118/235 (50%), Gaps = 7/235 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQ---NGLAEDVL 57
G +LD + ++L MY K+G + V + + +V++W +IAG N LA +L
Sbjct: 213 GLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLL 272
Query: 58 DQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMY 117
D+ M+ G RP+ T S + +C+ + G+Q+H+ ++K A D+ L+ MY
Sbjct: 273 DE---MKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMY 329
Query: 118 SRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
S+C +DD+ + + D++ W+++I+ Y G +A++LF +M ++ + N T
Sbjct: 330 SKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLS 389
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALI 232
++L + + + + + +K ++D G+C ++DEA+ +
Sbjct: 390 TVLKSVASLQAIKVCKQIHTISIKS-GIYSDFYVINSLLDTYGKCNHIDEASKIF 443
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 100/197 (50%), Gaps = 14/197 (7%)
Query: 93 QIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHG 152
++HA ++K G S D + + L+++YS+C + K E DVV WSS+++ Y +G
Sbjct: 2 ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNG 61
Query: 153 KGEEAINLFEQMEQKEFEANDVTFVSLLYACS-----HCGLKEKGMEFFDLMVKKYRRKP 207
EEA+ +F +M + N+ TF S+L ACS + G K GM +V +
Sbjct: 62 FVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMA----VVTGFESDG 117
Query: 208 RLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEI 267
+ + T VV + +CG LD++ L + V+ N + W L S + A + +E+
Sbjct: 118 FVAN-TLVV-MYAKCGLLDDSRRLFGGI-VERNVVSWNALFSCYVQSELCGEAVGLFKEM 174
Query: 268 L--GVNPQDAAPYVLLS 282
+ G+ P + + ++L+
Sbjct: 175 VRSGIMPNEFSISIILN 191
>gi|302758830|ref|XP_002962838.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
gi|300169699|gb|EFJ36301.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
Length = 652
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 177/446 (39%), Positives = 270/446 (60%), Gaps = 16/446 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + +V G++L ++Y K G + + + +NV+AW + A A+N D +
Sbjct: 207 GIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVL 266
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASL--DVGVISSLISMYS 118
+ M + G P+ TFVSV+ +C+ +A L QG++IH + G L DV V+++L++MYS
Sbjct: 267 HRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLESDVYVLTALVNMYS 326
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+CG L + F + + D+VLW+S+IA HG+ E+A+ LFE+M + + +TF S
Sbjct: 327 KCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTS 386
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+L+ACSH G+ ++G + F + + P EH+ C+VDLLGR G++ ++ L+ +MP +
Sbjct: 387 VLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSEDLLLHMPFE 446
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
+ + W L AC+T+++ D A AE + ++P+ APYVLLSN++A A RW V+ R
Sbjct: 447 PHPVAWMAFLGACRTYRNMDGAIWAAENLFQLDPRKRAPYVLLSNMYAKAGRWSDVARMR 506
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
+AM+ KE G SW+E+K++VH+F GD HPR EI L+ LT MK GYVPDT
Sbjct: 507 QAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAELQRLTKLMKAAGYVPDTE 566
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAFAEHT----------RGLIVM----LPFKYISEIK 404
+HD+ E KE + +HSEKLA+AFA T + L V K+IS++
Sbjct: 567 MVLHDVKQEVKETMVGYHSEKLAMAFALLTTPEGSPIRVVKNLRVCNDCHTASKFISKLV 626
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
NREI+VRD +RFH F+NG CSCGDYW
Sbjct: 627 NREIVVRDCNRFHRFQNGACSCGDYW 652
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 137/275 (49%), Gaps = 4/275 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E + + ++L +Y K G + V M R+V+AW ++A A+NG + L +
Sbjct: 106 GIEEESIVQTALVSLYGKLGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLF 165
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M + G P+K+T VS + +C+ L L G +H V G V V ++L+++Y +C
Sbjct: 166 RQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKC 225
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ + + F + +VV WS++ AAY + + +AI + +M+ + N TFVS+L
Sbjct: 226 GRIEAAAEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVL 285
Query: 181 YACSHCGLKEKGMEFFD-LMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
AC+ ++G + + V + + T +V++ +CG L A + +
Sbjct: 286 DACAAIAALKQGRRIHERIHVLGGGLESDVYVLTALVNMYSKCGNLALAGNMFDKI-AHL 344
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNP 272
+ ++W +L++ H T+ A + E + G+ P
Sbjct: 345 DLVLWNSLIATNAQHGQTEKALELFERMRLEGLQP 379
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 128/284 (45%), Gaps = 4/284 (1%)
Query: 12 LAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPD 71
L +Y K + V + +NV +W ++A A+N + + M + G P
Sbjct: 16 LIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFFRGMLLQGINPG 75
Query: 72 KITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFL 131
++ +S+C++ + G+ I ++ G + V ++L+S+Y + G D+ FL
Sbjct: 76 EVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGHCTDAASVFL 135
Query: 132 ECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEK 191
+ DVV WS+M+AAY +G EA+ LF QM+ N VT VS L AC+ G
Sbjct: 136 RMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRS 195
Query: 192 GMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSAC 251
G V+ + + T +V+L G+CG + EAAA V+ N + W + +A
Sbjct: 196 G-ALMHQRVEAQGIQSGVVVGTALVNLYGKCGRI-EAAAEAFGQIVEKNVVAWSAISAAY 253
Query: 252 KTHKSTDMAGRIAE--EILGVNPQDAAPYVLLSNIHASAKRWQG 293
+ A R+ ++ G+ P +L A A QG
Sbjct: 254 ARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQG 297
>gi|302800114|ref|XP_002981815.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
gi|300150647|gb|EFJ17297.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
Length = 637
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 177/446 (39%), Positives = 271/446 (60%), Gaps = 16/446 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + +V G++L ++Y K G + + + +NV+AW + A A+N D +
Sbjct: 192 GIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVL 251
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH--AEVVKAGASLDVGVISSLISMYS 118
+ M + G P+ TFVSV+ +C+ +A L QG++IH +V+ G DV V+++L++MYS
Sbjct: 252 HRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVYVLTALVNMYS 311
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+CG L + F + + D+VLW+S+IA HG+ E+A+ LFE+M + + +TF S
Sbjct: 312 KCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTS 371
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+L+ACSH G+ ++G + F + + P EH+ C+VDLLGR G++ ++ L+ +MP +
Sbjct: 372 VLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSEDLLLHMPFE 431
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
+ + W L AC+T+++ D A AE + ++P+ APYVLLSN++A A RW V+ R
Sbjct: 432 PHPVAWMAFLGACRTYRNMDRAIWAAENLFQLDPRKRAPYVLLSNMYAKAGRWSDVARMR 491
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
+AM+ KE G SW+E+K++VH+F GD HPR EI L+ LT MK GYVPDT
Sbjct: 492 QAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAELQRLTKLMKEAGYVPDTE 551
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAFAEHT----------RGLIVM----LPFKYISEIK 404
+HD+ E KE + +HSEKLA+AFA T + L V K+IS++
Sbjct: 552 MVLHDVKQEVKEIMVGYHSEKLAMAFALLTTPEGSPIRVVKNLRVCNDCHTASKFISKLV 611
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
NREI+VRD +RFH F+NG CSCGDYW
Sbjct: 612 NREIVVRDCNRFHRFQNGACSCGDYW 637
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 137/275 (49%), Gaps = 4/275 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E + + ++L MY K G + V M R+V+AW ++A A+NG + L +
Sbjct: 91 GIEEESIVQTALVSMYGKLGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLF 150
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M + G P+K+T VS + +C+ L L G +H V G V V ++L+++Y +C
Sbjct: 151 RQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKC 210
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ +V+ F + +VV WS++ AAY + + +AI + +M+ + N TFVS+L
Sbjct: 211 GRIEAAVEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLVPNSTTFVSVL 270
Query: 181 YACSHCGLKEKGMEFFD-LMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
AC+ ++G + V + + T +V++ +CG L A + +
Sbjct: 271 DACAAIAALKQGRRIHERTQVLGGGLESDVYVLTALVNMYSKCGNLALAGDMFDKI-AHL 329
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNP 272
+ ++W +L++ H T+ A + E + G+ P
Sbjct: 330 DLVLWNSLIATNAQHGQTEKALELFERMRLEGLQP 364
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 127/280 (45%), Gaps = 4/280 (1%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y + G++ K MP+ ++++W LIA N + + M + G P ++
Sbjct: 5 YSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINPGEVGI 64
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
+S+C++ + G+ I ++ G + V ++L+SMY + G D+ FL +
Sbjct: 65 SIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFLRMSH 124
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
DVV WS+M+AAY +G EA+ LF QM+ N VT VS L AC+ G G
Sbjct: 125 RDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSG-AL 183
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK 255
V+ + + T +V+L G+CG + EAA V+ N + W + +A +
Sbjct: 184 MHQRVEAQGIQSGVVVGTALVNLYGKCGRI-EAAVEAFGQIVEKNVVAWSAISAAYARND 242
Query: 256 STDMAGRIAE--EILGVNPQDAAPYVLLSNIHASAKRWQG 293
A R+ ++ G+ P +L A A QG
Sbjct: 243 RNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQG 282
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 174/456 (38%), Positives = 270/456 (59%), Gaps = 26/456 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + D ++L MY + G + +++ M R+++ W T+I G + ED L
Sbjct: 431 GLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLML 490
Query: 61 NLMRM-----------VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV 109
+ M++ V +P+ IT ++++ SC+ L+ L +G++IHA +K + DV V
Sbjct: 491 HKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAV 550
Query: 110 ISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEF 169
S+L+ MY++CGCL S K F + +V+ W+ ++ AYG HG ++AI++ M +
Sbjct: 551 GSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGV 610
Query: 170 EANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAA 229
+ N+VTF+S+ ACSH G+ +G++ F M K Y +P +HY CVVDLLGR G + EA
Sbjct: 611 KPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVVDLLGRAGRVKEAY 670
Query: 230 ALIRNMPVKAN-AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASA 288
LI +P + A W +LL AC+ H + ++ A+ ++ + P A+ YVLL+NI++SA
Sbjct: 671 QLINLIPRNFDKAGAWSSLLGACRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSA 730
Query: 289 KRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEM 348
W +E R M+ + V+KEPG SW+E ++VH+F GD SHP+S ++ YLE L M
Sbjct: 731 GLWYKATEVRRNMKAQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLRGYLETLWERM 790
Query: 349 KLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVM------------ 394
+ GY+PDT +H+++ +EKE L HSEKLAIAF + G I+
Sbjct: 791 RKEGYIPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCH 850
Query: 395 LPFKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
L K+IS++ +REII+RD RFHHF+NG CSCGDYW
Sbjct: 851 LATKFISKVVDREIILRDVRRFHHFKNGTCSCGDYW 886
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 143/318 (44%), Gaps = 22/318 (6%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR-MVG 67
GS+L MY ++ G +V M R + W +I G AQN E+ L + M G
Sbjct: 337 GSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAG 396
Query: 68 FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV 127
+ T V+ +C + + IH VVK G D V ++L+ MYSR G +D +
Sbjct: 397 LLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAK 456
Query: 128 KTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEA-----------NDVTF 176
+ F + E D+V W+++I Y F + E+A+ + +M+ E +A N +T
Sbjct: 457 RIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITL 516
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
+++L +C+ KG E +K + + +VD+ +CG L + + +P
Sbjct: 517 MTILPSCAALSALAKGKEIHAYAIKN-NLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP 575
Query: 237 VKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGV 294
++ N I W ++ A H ++ A + ++ GV P + + + S +G+
Sbjct: 576 IR-NVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGL 634
Query: 295 SEFREAMRERNVKKEPGV 312
F N+KK+ GV
Sbjct: 635 KIF------YNMKKDYGV 646
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 118/251 (47%), Gaps = 6/251 (2%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
EL+ ++L MY K G L + ++ R+++ W T+++ QN + L+
Sbjct: 229 ELNSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLRE 288
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVG--VISSLISMYSRC 120
M + G PD T SV+ +CS L L G+++HA +K G SLD V S+L+ MY C
Sbjct: 289 MVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNG-SLDENSFVGSALVDMYCNC 347
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE-FEANDVTFVSL 179
+ + F + LW++MI Y + EEA+ LF +ME+ AN T +
Sbjct: 348 KQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGV 407
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
+ AC G K +VK+ + R ++D+ R G +D A + M +
Sbjct: 408 VPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQ-NALMDMYSRLGKIDIAKRIFGKMEDR- 465
Query: 240 NAIIWKTLLSA 250
+ + W T+++
Sbjct: 466 DLVTWNTIITG 476
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 122/242 (50%), Gaps = 15/242 (6%)
Query: 40 WITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVV 99
WI L+ K ++ L + + Y M ++G +PD F +++ + ++L + G+QIHA V
Sbjct: 61 WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVY 120
Query: 100 KAGASLD-VGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAI 158
K G +D V V ++L+++Y +CG K F + V W+S+I++ K E A+
Sbjct: 121 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 180
Query: 159 NLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYR----RKPRLEHY-- 212
F M ++ E + T VS+ ACS+ + E G+ LM K+ RK L +
Sbjct: 181 EAFRCMLDEDVEPSSFTLVSVALACSNFPMPE-GL----LMGKQVHAYGLRKGELNSFII 235
Query: 213 TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA-CKTHKSTDMAGRIAEEIL-GV 270
+V + G+ G L + L+ + + + + W T+LS+ C+ + + + E +L GV
Sbjct: 236 NTLVAMYGKMGKLASSKVLLGSFEGR-DLVTWNTVLSSLCQNEQFLEALEYLREMVLEGV 294
Query: 271 NP 272
P
Sbjct: 295 EP 296
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 95/199 (47%), Gaps = 5/199 (2%)
Query: 1 GFELDLVA-GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQ 59
G+ +D V ++L ++Y K G KV + RN ++W +LI+ E L+
Sbjct: 123 GYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEA 182
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELAT---LGQGQQIHAEVVKAGASLDVGVISSLISM 116
+ M P T VSV +CS L G+Q+HA ++ G L+ +I++L++M
Sbjct: 183 FRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKG-ELNSFIINTLVAM 241
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
Y + G L S E D+V W++++++ + + EA+ +M + E + T
Sbjct: 242 YGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTI 301
Query: 177 VSLLYACSHCGLKEKGMEF 195
S+L ACSH + G E
Sbjct: 302 SSVLPACSHLEMLRTGKEL 320
>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
Length = 874
Score = 342 bits (876), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 177/442 (40%), Positives = 264/442 (59%), Gaps = 25/442 (5%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G++L Y K GS + + +++ ++V+AW +++ AQ G E +N M + G
Sbjct: 438 GTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGI 497
Query: 69 RPDKITFVSVISSCS-ELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV 127
+P++ T SVI +C+ A + QG+Q HA +K + V S+L+SMYSR G +D +
Sbjct: 498 KPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQ 557
Query: 128 KTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCG 187
F D+V W+SMI+ Y HG +AI F QME + + VTF++++ C+H G
Sbjct: 558 IVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNG 617
Query: 188 LKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTL 247
L +G ++FD MV+ ++ P +EHY C+VDL R G LDE +LIR+MP A A++W+TL
Sbjct: 618 LVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTL 677
Query: 248 LSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVK 307
L AC+ HK+ ++ A+++L + P D++ YVLLSNI+A+A +W+ E R+ M R VK
Sbjct: 678 LGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVK 737
Query: 308 KEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSE 367
KE G SW++IKN+VH F DKSHP S +I L+ + + +K GY P+T +HD+ +
Sbjct: 738 KEAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKLKVIITRLKQDGYSPNTSFVLHDIAED 797
Query: 368 EKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREI 408
+KE L HSE+LA+AF GLI P K +S I++REI
Sbjct: 798 QKEAMLVAHSERLALAF-----GLIATPPGTPLQIVKNLRVCGDCHMVMKMVSMIEDREI 852
Query: 409 IVRDASRFHHFRNGKCSCGDYW 430
I+RD SRFHHF G CSCGD+W
Sbjct: 853 IMRDCSRFHHFNGGACSCGDFW 874
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 129/255 (50%), Gaps = 17/255 (6%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
++ AG+SL MYMK GS+ EG +V MP +NV+ W +L+ G A + +V+ + MR
Sbjct: 134 EVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMR 193
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G P+ TF SV+S+ + L GQ++HA+ VK G V V +SL++MY++CG ++
Sbjct: 194 AEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVE 253
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D+ F E D+V W++++A + EA+ LF + + T+ +++ C+
Sbjct: 254 DAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCA 313
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEH--------YTCVVDLLGRCGYLDEAAALIRNMP 236
+ LK+ L + + L+H T + D +CG L +A +
Sbjct: 314 N--LKQ-------LALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTT 364
Query: 237 VKANAIIWKTLLSAC 251
N + W ++S C
Sbjct: 365 GSRNVVSWTAIISGC 379
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 129/257 (50%), Gaps = 10/257 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMP-IRNVIAWITLIAGKAQNGLAEDVLDQ 59
GF L ++LA Y K G L + + + RNV++W +I+G QNG +
Sbjct: 332 GFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVL 391
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
++ MR P++ T+ +++ + L+ L QIHA+V+K V ++L++ YS+
Sbjct: 392 FSRMREDRVMPNEFTYSAMLKA--SLSILPP--QIHAQVIKTNYQHIPSVGTALLASYSK 447
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G +D++ F E DVV WS+M++ + G E A LF +M + + N+ T S+
Sbjct: 448 FGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSV 507
Query: 180 LYACS--HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
+ AC+ G+ ++G +F + + KYR + + +V + R G +D +A ++
Sbjct: 508 IDACACPSAGV-DQGRQFHAISI-KYRYHDAICVSSALVSMYSRKGNID-SAQIVFERQT 564
Query: 238 KANAIIWKTLLSACKTH 254
+ + W +++S H
Sbjct: 565 DRDLVSWNSMISGYAQH 581
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 98/206 (47%), Gaps = 7/206 (3%)
Query: 48 AQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASL-D 106
A+ G+ +VLDQ+++ R G D T V+ +C + G+Q+H VK G +
Sbjct: 75 ARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGE 134
Query: 107 VGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQ 166
V +SL+ MY +CG + + ++ F +VV W+S++ E + LF +M
Sbjct: 135 VSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRA 194
Query: 167 KEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC--VVDLLGRCGY 224
+ N TF S+L A + G + G VK R + C ++++ +CG
Sbjct: 195 EGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRS---SVFVCNSLMNMYAKCGL 251
Query: 225 LDEAAALIRNMPVKANAIIWKTLLSA 250
+++A ++ M + + + W TL++
Sbjct: 252 VEDAKSVFNWMETR-DMVSWNTLMAG 276
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 80/154 (51%), Gaps = 6/154 (3%)
Query: 6 LVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRM 65
+ S+L MY + G++ + V R++++W ++I+G AQ+G + ++ + M
Sbjct: 537 ICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEA 596
Query: 66 VGFRPDKITFVSVISSCSELATLGQGQQIHAEVV---KAGASLDVGVISSLISMYSRCGC 122
G + D +TF++VI C+ + +GQQ +V K +++ + ++ +YSR G
Sbjct: 597 SGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTME--HYACMVDLYSRAGK 654
Query: 123 LDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGE 155
LD+++ + + + ++W +++ A H E
Sbjct: 655 LDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVE 688
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 65/162 (40%), Gaps = 8/162 (4%)
Query: 148 YGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKP 207
Y G E ++ F + + T +L AC + G + L VK +
Sbjct: 74 YARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRG 133
Query: 208 RLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK--STDMAGRIAE 265
+ T +VD+ +CG + E + MP K N + W +LL+ C + S MA
Sbjct: 134 EVSAGTSLVDMYMKCGSVCEGIEVFEGMP-KKNVVTWTSLLTGCAHAQMHSEVMALFFRM 192
Query: 266 EILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVK 307
G+ P P+ S + A A QG + + + ++VK
Sbjct: 193 RAEGIWPN---PFTFASVLSAVAS--QGALDLGQRVHAQSVK 229
>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
Length = 874
Score = 342 bits (876), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 177/442 (40%), Positives = 264/442 (59%), Gaps = 25/442 (5%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G++L Y K GS + + +++ ++V+AW +++ AQ G E +N M + G
Sbjct: 438 GTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGI 497
Query: 69 RPDKITFVSVISSCS-ELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV 127
+P++ T SVI +C+ A + QG+Q HA +K + V S+L+SMYSR G +D +
Sbjct: 498 KPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQ 557
Query: 128 KTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCG 187
F D+V W+SMI+ Y HG +AI F QME + + VTF++++ C+H G
Sbjct: 558 IVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNG 617
Query: 188 LKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTL 247
L +G ++FD MV+ ++ P +EHY C+VDL R G LDE +LIR+MP A A++W+TL
Sbjct: 618 LVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTL 677
Query: 248 LSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVK 307
L AC+ HK+ ++ A+++L + P D++ YVLLSNI+A+A +W+ E R+ M R VK
Sbjct: 678 LGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVK 737
Query: 308 KEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSE 367
KE G SW++IKN+VH F DKSHP S +I L+ + + +K GY P+T +HD+ +
Sbjct: 738 KEAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKLKVIITRLKQDGYSPNTSFVLHDIAED 797
Query: 368 EKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREI 408
+KE L HSE+LA+AF GLI P K +S I++REI
Sbjct: 798 QKEAMLVAHSERLALAF-----GLIATPPGTPLQIVKNLRVCGDCHMVMKMVSMIEDREI 852
Query: 409 IVRDASRFHHFRNGKCSCGDYW 430
I+RD SRFHHF G CSCGD+W
Sbjct: 853 IMRDCSRFHHFNGGACSCGDFW 874
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 129/255 (50%), Gaps = 17/255 (6%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
++ AG+SL MYMK GS+ EG +V MP +NV+ W +L+ G A + +V+ + MR
Sbjct: 134 EVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMR 193
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G P+ TF SV+S+ + L GQ++HA+ VK G V V +SL++MY++CG ++
Sbjct: 194 AEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVE 253
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D+ F E D+V W++++A + EA+ LF + + T+ +++ C+
Sbjct: 254 DAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCA 313
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEH--------YTCVVDLLGRCGYLDEAAALIRNMP 236
+ LK+ L + + L+H T + D +CG L +A +
Sbjct: 314 N--LKQ-------LALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTT 364
Query: 237 VKANAIIWKTLLSAC 251
N + W ++S C
Sbjct: 365 GSRNVVSWTAIISGC 379
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 129/257 (50%), Gaps = 10/257 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMP-IRNVIAWITLIAGKAQNGLAEDVLDQ 59
GF L ++LA Y K G L + + + RNV++W +I+G QNG +
Sbjct: 332 GFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVL 391
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
++ MR P++ T+ +++ + L+ L QIHA+V+K V ++L++ YS+
Sbjct: 392 FSRMREDRVMPNEFTYSAMLKA--SLSILPP--QIHAQVIKTNYQHIPFVGTALLASYSK 447
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G +D++ F E DVV WS+M++ + G E A LF +M + + N+ T S+
Sbjct: 448 FGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSV 507
Query: 180 LYACS--HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
+ AC+ G+ ++G +F + + KYR + + +V + R G +D +A ++
Sbjct: 508 IDACACPSAGV-DQGRQFHAISI-KYRYHDAICVSSALVSMYSRKGNID-SAQIVFERQT 564
Query: 238 KANAIIWKTLLSACKTH 254
+ + W +++S H
Sbjct: 565 DRDLVSWNSMISGYAQH 581
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 98/206 (47%), Gaps = 7/206 (3%)
Query: 48 AQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASL-D 106
A+ G+ +VLDQ+++ R G D T V+ +C + G+Q+H VK G +
Sbjct: 75 ARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGE 134
Query: 107 VGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQ 166
V +SL+ MY +CG + + ++ F +VV W+S++ E + LF +M
Sbjct: 135 VSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRA 194
Query: 167 KEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC--VVDLLGRCGY 224
+ N TF S+L A + G + G VK R + C ++++ +CG
Sbjct: 195 EGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRS---SVFVCNSLMNMYAKCGL 251
Query: 225 LDEAAALIRNMPVKANAIIWKTLLSA 250
+++A ++ M + + + W TL++
Sbjct: 252 VEDAKSVFNWMETR-DMVSWNTLMAG 276
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 80/154 (51%), Gaps = 6/154 (3%)
Query: 6 LVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRM 65
+ S+L MY + G++ + V R++++W ++I+G AQ+G + ++ + M
Sbjct: 537 ICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEA 596
Query: 66 VGFRPDKITFVSVISSCSELATLGQGQQIHAEVV---KAGASLDVGVISSLISMYSRCGC 122
G + D +TF++VI C+ + +GQQ +V K +++ + ++ +YSR G
Sbjct: 597 SGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTME--HYACMVDLYSRAGK 654
Query: 123 LDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGE 155
LD+++ + + + ++W +++ A H E
Sbjct: 655 LDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVE 688
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 65/162 (40%), Gaps = 8/162 (4%)
Query: 148 YGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKP 207
Y G E ++ F + + T +L AC + G + L VK +
Sbjct: 74 YARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRG 133
Query: 208 RLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK--STDMAGRIAE 265
+ T +VD+ +CG + E + MP K N + W +LL+ C + S MA
Sbjct: 134 EVSAGTSLVDMYMKCGSVCEGIEVFEGMP-KKNVVTWTSLLTGCAHAQMHSEVMALFFRM 192
Query: 266 EILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVK 307
G+ P P+ S + A A QG + + + ++VK
Sbjct: 193 RAEGIWPN---PFTFASVLSAVAS--QGALDLGQRVHAQSVK 229
>gi|449494221|ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 342 bits (876), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 171/449 (38%), Positives = 274/449 (61%), Gaps = 24/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
+L++ ++L +Y K G + + V MP R+V+ W ++ AG QN + E L +
Sbjct: 195 AMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALF 254
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
G + D+ SVI +C+ LA + +G+Q++A + K+G ++ V SSLI MY++C
Sbjct: 255 RKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLIDMYAKC 314
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +++S K F + E +VVLW++MI+ H + E + LFE+M+Q NDVTFVS+L
Sbjct: 315 GGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVL 374
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC H GL +KG ++FDLM K++ P + HY+C+VD L R G + EA LI +P A+
Sbjct: 375 SACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNAS 434
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A +W +LL++C+TH + ++A A+++ + P ++ Y+LLSN++A+ +W V++ R+
Sbjct: 435 ASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWDEVAKMRKL 494
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
++E +VKKE G SW+EIK++VH F +G+++HP+ +EI L E+ E++ GY +T D
Sbjct: 495 LKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMDELQKLGYKVETQHD 554
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPFKYISEIKN--------------- 405
+H + K+ L+HHSEKLA T GL+ + P I +KN
Sbjct: 555 LHQVGESIKQELLRHHSEKLAF-----TMGLLFLPPNAPIRIMKNLRICGDCHSFMKLAS 609
Query: 406 ----REIIVRDASRFHHFRNGKCSCGDYW 430
R++IVRD +RFHHF+NG CSCGD+W
Sbjct: 610 KFFCRDVIVRDTNRFHHFKNGCCSCGDFW 638
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 144/284 (50%), Gaps = 4/284 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + DL+ + L +MY K GS+ +V MP R++++W T+I QNG + LD
Sbjct: 94 GLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLL 153
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G + T SV+ +C+ L + Q +HA +KA L+V V ++L+ +Y++C
Sbjct: 154 LQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKC 213
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + D+V F VV WSSM A Y + E+A+ LF + + + + S++
Sbjct: 214 GLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVI 273
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+ +G + + ++ K + + ++D+ +CG ++E+ + R++ K N
Sbjct: 274 CACAGLAAMIEGKQ-VNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVE-KRN 331
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLS 282
++W ++S H + + E++ +G++P D +LS
Sbjct: 332 VVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLS 375
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 95/182 (52%), Gaps = 5/182 (2%)
Query: 68 FRPDKITFV-SVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
F ++FV ++ C++ L QG+ HA+++ G D+ + LI+MYS+CG +D +
Sbjct: 59 FNATHVSFVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFA 118
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC-SH 185
+ F E +V W++MI + +G+ EA++L QM+++ ++ T S+L AC +
Sbjct: 119 RQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAK 178
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
C L E + K + T ++D+ +CG + +A + +MP ++ + W
Sbjct: 179 CALSE--CQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRS-VVTWS 235
Query: 246 TL 247
++
Sbjct: 236 SM 237
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 342 bits (876), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 175/450 (38%), Positives = 265/450 (58%), Gaps = 30/450 (6%)
Query: 6 LVAGSSLAHMYMKSGSLVEGEKVIRLMPIR--NVIAWITLIAGKAQNGLAEDVLDQYNLM 63
LV ++L MY K S + +P R NV+ W +I G AQ G + D L ++ M
Sbjct: 442 LVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEM 501
Query: 64 --RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGA--SLDVGVISSLISMYSR 119
+ P+ T ++ +C+ L++L G+QIHA V + S V + LI MYS+
Sbjct: 502 ISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSK 561
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG +D + F + V W+SM++ YG HG+G+EA+++F++M++ F +D++F+ L
Sbjct: 562 CGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVL 621
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
LYACSH G+ ++G+++FD+M Y +HY CV+DLL R G LD+A I+ MP++
Sbjct: 622 LYACSHSGMVDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEP 681
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
+A IW LLSAC+ H + ++A +++ + ++ Y L+SNI+A+A+RW+ V+ R+
Sbjct: 682 SAAIWVALLSACRVHSNVELAEYALNKLVSMKAENDGSYTLISNIYATARRWKDVARIRQ 741
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M++ +KK PG SW++ K F +GD+SHP S EI LE L +K+ GYVP+T
Sbjct: 742 LMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETNF 801
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYI 400
+HD+D EEK L HSEKLA+A+ GL+ P F YI
Sbjct: 802 ALHDVDDEEKNNLLTEHSEKLALAY-----GLLTTSPGCPIRITKNLRVCGDCHSAFIYI 856
Query: 401 SEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
S+I + EIIVRD+SRFHHF+NG CSCG YW
Sbjct: 857 SKIVDHEIIVRDSSRFHHFKNGSCSCGGYW 886
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 154/352 (43%), Gaps = 63/352 (17%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKV---IRLMPIRNVIAWITLIAGKAQNGLAEDVL 57
GFE ++ ++L MY +SGSL + V I I +VI+W +++A + L
Sbjct: 179 GFESNVFVCNALVAMYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTAL 238
Query: 58 DQYNLMRMV------GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVIS 111
D ++ M + R D I+ V+++ +C+ L L Q ++IH+ ++ G D V +
Sbjct: 239 DLFSEMTTIVHEKATNERSDIISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCN 298
Query: 112 SLISMYSRCGCLDDSVKTFLECEYSDVV-------------------------------- 139
+LI Y++CG + D+V F E+ DVV
Sbjct: 299 ALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPL 358
Query: 140 ---LWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFF 196
WS++IA Y G G+EA++ F+QM E N VT +SLL AC+ G +GME
Sbjct: 359 DVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETH 418
Query: 197 DLMVKK-----------YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA-NAIIW 244
+KK L + ++D+ +C A + ++P + N + W
Sbjct: 419 AYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTW 478
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPY------VLLSNIHASAKR 290
++ + ++ A ++ E++ P AP +L++ H S+ R
Sbjct: 479 TVMIGGYAQYGDSNDALKLFSEMIS-KPYAVAPNAYTISCILMACAHLSSLR 529
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 146/316 (46%), Gaps = 24/316 (7%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRN----VIAWITLIAGKAQNGLAEDVLDQY 60
D+V+ +++ Y +SG ++ + M N VI W +IAG AQ G ++ LD +
Sbjct: 324 DVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTF 383
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVK------------AGASLDVG 108
M + G P+ +T +S++S+C+ L L QG + HA +K G D+
Sbjct: 384 QQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLV 443
Query: 109 VISSLISMYSRCGCLDDSVKTF--LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQ 166
V ++LI MYS+C + F + +VV W+ MI Y +G +A+ LF +M
Sbjct: 444 VHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMIS 503
Query: 167 KEFEA--NDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY-TCVVDLLGRCG 223
K + N T +L AC+H G + + + + + + C++D+ +CG
Sbjct: 504 KPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCG 563
Query: 224 YLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLL 281
+D A + +MP K N + W +++S H A I +++ G P D + VLL
Sbjct: 564 DVDTARNVFDSMP-KRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLL 622
Query: 282 SNIHASAKRWQGVSEF 297
S QG+ F
Sbjct: 623 YACSHSGMVDQGLDYF 638
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 111/252 (44%), Gaps = 15/252 (5%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G+ + Y+ G+ + V+ + + W L+ + G + + M G
Sbjct: 86 GTGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGT 145
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
+PD T + +C EL + G H + G +V V ++L++MYSR G L+D+
Sbjct: 146 KPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASL 205
Query: 129 TFLECE---YSDVVLWSSMIAAYGFHGKGEEAINLFEQM-----EQKEFEAND-VTFVSL 179
F E DV+ W+S++AA+ A++LF +M E+ E +D ++ V++
Sbjct: 206 VFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNI 265
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC--VVDLLGRCGYLDEAAALIRNMPV 237
L AC+ + E + R + + C ++D +CG + +A + M
Sbjct: 266 LPACASLKALPQTKEIHSYAI---RNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEF 322
Query: 238 KANAIIWKTLLS 249
K + + W +++
Sbjct: 323 K-DVVSWNAMVT 333
>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 342 bits (876), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 178/440 (40%), Positives = 258/440 (58%), Gaps = 14/440 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+V + + +K G + MP RNV +W ++IAG Q G A++ + + M
Sbjct: 193 DVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKME 252
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G + +++T V+V+++C++L L G +IH + G +V + ++LI MY +CGCL+
Sbjct: 253 EAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLE 312
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
++ K F E E VV WS+MI HG+ EEA+ LF M Q E N VTF+ LL+ACS
Sbjct: 313 EACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACS 372
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL +G FF M + Y P++EHY C+VDLL R G L EA I NMP+K N ++W
Sbjct: 373 HMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVW 432
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
LL AC+ HK+ +MA + +L ++P + YV+LSNI+A A RW+ + R+ M++R
Sbjct: 433 GALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDR 492
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
VKK PG S + + VH+F G++SHP + +I EEL EM+L+GYVP+T + D+
Sbjct: 493 QVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQRWEELLEEMRLKGYVPNTSVVLLDI 552
Query: 365 DSEEKEYNLKHHSEKLAIAF------AEHTRGLIVML--------PFKYISEIKNREIIV 410
+ EK + HSEKLA+ F AE ++ L FK IS I NREI+V
Sbjct: 553 EEGEKVKFVSRHSEKLALVFGLMNTPAETPIRIMKNLRICEDCHSAFKLISAIVNREIVV 612
Query: 411 RDASRFHHFRNGKCSCGDYW 430
RD +RFH F + CSC DYW
Sbjct: 613 RDRNRFHCFNDNSCSCRDYW 632
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 119/271 (43%), Gaps = 37/271 (13%)
Query: 37 VIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHA 96
W + + A+ D + + +R PD T SV+ +C L L G+ +H
Sbjct: 93 TFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHG 152
Query: 97 EVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLW--------------- 141
V K G ++ + + ++ +Y+ CG + ++ F + DVV W
Sbjct: 153 VVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEG 212
Query: 142 ----------------SSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
+SMIA Y GK +EAI+LF +ME+ + N+VT V++L AC+
Sbjct: 213 AYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACAD 272
Query: 186 CGLKEKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
G + GM + + ++R R+ + ++D+ +CG L+EA + M + + W
Sbjct: 273 LGALDLGMRIHEYSNRHGFKRNVRISN--TLIDMYVKCGCLEEACKVFEEMEERT-VVSW 329
Query: 245 KTLLSACKTHKSTDMAGRIAEEI--LGVNPQ 273
++ H + A R+ ++ +G+ P
Sbjct: 330 SAMIGGLAMHGRAEEALRLFSDMSQVGIEPN 360
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 86/168 (51%), Gaps = 15/168 (8%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ ++ ++L MY+K G L E KV M R V++W +I G A +G AE+ L +
Sbjct: 290 GFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLF 349
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISS------LI 114
+ M VG P+ +TF+ ++ +CS + + +G++ A + + D G+I ++
Sbjct: 350 SDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTR-----DYGIIPQIEHYGCMV 404
Query: 115 SMYSRCGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGK---GEEAI 158
+ SR G L ++ + L + V+W +++ A H EEAI
Sbjct: 405 DLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAI 452
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 71/160 (44%), Gaps = 4/160 (2%)
Query: 92 QQIHAEVVKAGASLDVGVIS--SLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYG 149
+Q+HA+++K A L + ++ L+ ++ + +E + + +W+S + A
Sbjct: 45 RQVHAQIIKTNAPLSILPLTRVGLVCAFTPSFHYAQQIFKCVEKQKPETFVWNSCLKALA 104
Query: 150 FHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRL 209
+AI LF ++ Q + + T S+L AC + L +V+K + L
Sbjct: 105 EGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNL-LDLSNGRILHGVVEKVGFRSNL 163
Query: 210 EHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
+V L CG + EA L MP + + + W +++
Sbjct: 164 YLQNMIVHLYASCGEMGEARLLFEKMP-QRDVVTWNIMIA 202
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 342 bits (876), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 174/446 (39%), Positives = 262/446 (58%), Gaps = 18/446 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ D+ + L ++Y + G E + + I W LI+G AQ+GL E+ L +
Sbjct: 476 GYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVF 535
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G + + TFVS IS+ + LA + QG+QIHA V+K G + + + ++LIS+Y +C
Sbjct: 536 MKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSETEISNALISLYGKC 595
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++D+ F E + V W+++I HG+G EA++LF+QM+Q+ + +DVTFV +L
Sbjct: 596 GSIEDAKMDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVL 655
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL E+G+ +F M ++ PR +HY CVVD+LGR G LD A + MP+ A+
Sbjct: 656 TACSHVGLVEEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAGQLDRAKRFVEEMPIPAD 715
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+++W+TLLSACK HK+ ++ A+ +L + P D+A YVLLSN +A +W + R+
Sbjct: 716 SMVWRTLLSACKVHKNLEIGEFAAKHLLELEPHDSASYVLLSNAYAVTGKWASRDQIRKI 775
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M++R V+KEPG SW+E+KN VH F +GD+ HP + +I +L L + GY +
Sbjct: 776 MKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLADQIYNFLSHLNDRLYKIGYKQENYHL 835
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPF----------------KYISEIK 404
H+ + E K+ HSEKLA+AF L +P K+ S +
Sbjct: 836 FHEKEKEGKDPTAFVHSEKLAVAFG--LMSLPSCMPLRVIKNLRVCNDCHTWMKFTSGVM 893
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
REI++RD RFHHF NG CSCGDYW
Sbjct: 894 GREIVLRDVYRFHHFNNGSCSCGDYW 919
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 163/315 (51%), Gaps = 10/315 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ D+ L MY K G L + ++++ ++ ++V++W ++IAG Q+ ++ L+ +
Sbjct: 375 GFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETF 434
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G PD I S IS+C+ + + QG QIHA V +G S DV + + L+ +Y+RC
Sbjct: 435 KEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARC 494
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ +F E+ + + W+ +I+ + G EEA+ +F +M+Q + N TFVS +
Sbjct: 495 GISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSI 554
Query: 181 YACSHCGLKEKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
A ++ ++G + ++K Y + + + ++ L G+CG +++A M K
Sbjct: 555 SASANLADIKQGKQIHARVIKTGYTSETEISN--ALISLYGKCGSIEDAKMDFFEM-TKR 611
Query: 240 NAIIWKTLLSACKTH----KSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVS 295
N + W T+++ C H ++ D+ ++ ++ G+ P D +L+ +G+
Sbjct: 612 NEVSWNTIITCCSQHGRGLEALDLFDQMKQQ--GLKPSDVTFVGVLTACSHVGLVEEGLC 669
Query: 296 EFREAMRERNVKKEP 310
F+ E + P
Sbjct: 670 YFKSMSNEHGIHPRP 684
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 139/255 (54%), Gaps = 2/255 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF + G++L +Y++ S ++V M + + + TLI+G AQ G + L +
Sbjct: 173 GFFSETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIF 232
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M++ G PD +T S++++CS + L +G+Q+H+ ++KAG SLD + SL+ +Y +
Sbjct: 233 DEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKS 292
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++++++ F + ++VVLW+ M+ AYG ++ ++F +M N T+ +L
Sbjct: 293 GDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCML 352
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
C+H G G + L +K + + ++D+ + G+LD+A ++ +M + +
Sbjct: 353 RTCTHTGEIGLGEQIHSLTIKN-GFQSDMYVSGVLIDMYSKYGWLDKAQRIL-DMIEEKD 410
Query: 241 AIIWKTLLSACKTHK 255
+ W ++++ H+
Sbjct: 411 VVSWTSMIAGYVQHE 425
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 125/244 (51%), Gaps = 2/244 (0%)
Query: 7 VAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV 66
+ G+ L +Y K G + +V + +R+ ++W+ +++G AQNGL E+ + Y M
Sbjct: 78 IIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRS 137
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
G P S++S+C++ G+ IH +V K G + V ++LIS+Y RC +
Sbjct: 138 GVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLA 197
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHC 186
+ F + Y D V ++++I+ + G G+ A+ +F++M+ + VT SLL ACS
Sbjct: 198 DRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAV 257
Query: 187 GLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKT 246
G KG + ++K + + ++DL + G ++EA + + + N ++W
Sbjct: 258 GDLRKGKQLHSYLLKAGMSLDYIMEGS-LLDLYVKSGDIEEALQIFDSGD-RTNVVLWNL 315
Query: 247 LLSA 250
+L A
Sbjct: 316 MLVA 319
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 116/251 (46%), Gaps = 4/251 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G LD + SL +Y+KSG + E ++ NV+ W ++ Q D +
Sbjct: 274 GMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIF 333
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G RP+K T+ ++ +C+ +G G+QIH+ +K G D+ V LI MYS+
Sbjct: 334 YRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKY 393
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G LD + + E DVV W+SMIA Y H +EA+ F++M+ +++ S +
Sbjct: 394 GWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAI 453
Query: 181 YACSHCGLKEKGMEFF-DLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
AC+ +G + + V Y + + +V L RCG EA + + K
Sbjct: 454 SACAGIKAVHQGSQIHARVYVSGYSADVSI--WNGLVYLYARCGISKEAFSSFEAIEHK- 510
Query: 240 NAIIWKTLLSA 250
I W L+S
Sbjct: 511 EGITWNGLISG 521
>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 580
Score = 342 bits (876), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 182/443 (41%), Positives = 259/443 (58%), Gaps = 16/443 (3%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
FE LV G L +Y G + + MP + +W T+++G AQNG A + L +
Sbjct: 140 FETPLVNG--LIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSGYAQNGQAVEALKLFR 197
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M+ D T SV+ C +L L G+ +H+ + K G +DV + ++L+ MYS+CG
Sbjct: 198 EMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGVKIDVVLGTALVGMYSKCG 257
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
LD+++K F DV WS+MIA Y HG GE+A+ LF+ M++ + N VTF S+L
Sbjct: 258 SLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQLFDAMKRSKTIPNCVTFTSVLS 317
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
ACSH GL EKG + F+ M +Y+ P+++HY C+VDL R G + A I+ MP++ N
Sbjct: 318 ACSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQTMPIEPNV 377
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
++W+TLL ACKTH D+ I+ +IL ++P YVL+SN++AS RW V + R M
Sbjct: 378 VLWRTLLGACKTHGYKDLGEHISRKILKLDPSSPENYVLVSNVYASLGRWSSVCQVRSLM 437
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
+++ KK+ G S +EI VH+F MGD+SHP +I L ++ ++K G+V T +
Sbjct: 438 KDKAPKKQHGWSSIEINFMVHKFIMGDESHPEREKIYGMLHQMARKLKQVGHVNSTVDVL 497
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFA-EHT---------RGLIVMLP----FKYISEIKNRE 407
HD+D EEKEY L HSE+LAIA+ HT + L V K ISE+ NRE
Sbjct: 498 HDIDEEEKEYALGLHSERLAIAYGLLHTPNGSPIRIVKNLRVCRDCHEVIKLISEVYNRE 557
Query: 408 IIVRDASRFHHFRNGKCSCGDYW 430
IIVRD RFHHFR CSC DYW
Sbjct: 558 IIVRDRVRFHHFRERGCSCNDYW 580
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 115/236 (48%), Gaps = 2/236 (0%)
Query: 19 SGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSV 78
SG + ++ N+ W T+I G + + + Y M + G P+ TF V
Sbjct: 54 SGHVAYAHRIFSCTHHPNLFMWNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFV 113
Query: 79 ISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDV 138
+ +C +L L +GQ++H+++VK G + +++ LI +Y+ CGC+D + F E D
Sbjct: 114 LKACCKLLRLCEGQELHSQIVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPEPDS 173
Query: 139 VLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDL 198
WS+M++ Y +G+ EA+ LF +M+ + ++ T S++ C G + G
Sbjct: 174 ASWSTMVSGYAQNGQAVEALKLFREMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSY 233
Query: 199 MVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
M K+ K + T +V + +CG LD A + + M + + W T+++ H
Sbjct: 234 MDKE-GVKIDVVLGTALVGMYSKCGSLDNALKVFQGM-AERDVTAWSTMIAGYAIH 287
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 83/155 (53%), Gaps = 4/155 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G ++D+V G++L MY K GSL KV + M R+V AW T+IAG A +G E L +
Sbjct: 238 GVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQLF 297
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEV-VKAGASLDVGVISSLISMYSR 119
+ M+ P+ +TF SV+S+CS + +G QI + + + + ++ ++ R
Sbjct: 298 DAMKRSKTIPNCVTFTSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCR 357
Query: 120 CGCLDDSVKTFLECEY--SDVVLWSSMIAAYGFHG 152
G + + K F++ +VVLW +++ A HG
Sbjct: 358 AGMVGHAHK-FIQTMPIEPNVVLWRTLLGACKTHG 391
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 342 bits (876), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 163/445 (36%), Positives = 265/445 (59%), Gaps = 24/445 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+V+ +++ Y++S L + +V MP +N ++W+ +++G G +ED L +N MR
Sbjct: 363 DVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMR 422
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+P T+ IS+C EL +L G+Q+H +V+ G ++LI+MY+RCG +
Sbjct: 423 AEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVK 482
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
++ FL D V W++MI+A G HG G EA+ LF++M + + ++F+++L AC+
Sbjct: 483 EANLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACN 542
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL ++G ++F+ M + + P +HYT ++DLLGR G + EA LI+ MP + IW
Sbjct: 543 HSGLVDEGFQYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIW 602
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
+ +LS C+T ++ A+++ + PQ Y+LLSN +++A RW + R+ MR+R
Sbjct: 603 EAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDR 662
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
VKKEPG SW+E N+VH F +GD HP + ++ +LE + + M+ GYVPDT +HDM
Sbjct: 663 GVKKEPGCSWIEAGNKVHVFVVGDTKHPEAHKVYKFLEMVGARMRKLGYVPDTKVVLHDM 722
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPFKYISEIKN------------------- 405
+ +KE+ L HSE+LA+ F GL+ + P ++ +KN
Sbjct: 723 EPHQKEHILFAHSERLAVGF-----GLLKLPPGATVTVLKNLRICDDCHAVMMFMSKAVG 777
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
REI+VRD RFHHF++G+CSCG+YW
Sbjct: 778 REIVVRDVRRFHHFKDGECSCGNYW 802
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/338 (19%), Positives = 143/338 (42%), Gaps = 43/338 (12%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D + +++ Y++ G + V + ++ + W +I+G +G+ + + + M
Sbjct: 227 DALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFELFRRMV 286
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASL----DVGVISSLISMYSRC 120
+ D+ TF SV+S+C+ G+ +H ++ + + + V ++L+++YS+C
Sbjct: 287 LERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKC 346
Query: 121 G-------------------------------CLDDSVKTFLECEYSDVVLWSSMIAAYG 149
G CLD +V+ F E Y + + W M++ Y
Sbjct: 347 GNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYV 406
Query: 150 FHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRL 209
G E+A+ LF +M ++ + D T+ + AC G + G + +V+
Sbjct: 407 HGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSN- 465
Query: 210 EHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH----KSTDMAGRIAE 265
++ + RCG + EA + MP +++ W ++SA H ++ ++ R+
Sbjct: 466 SAGNALITMYARCGAVKEANLMFLVMP-NIDSVSWNAMISALGQHGHGREALELFDRMVA 524
Query: 266 EILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
E G+ P + +L+ + S +G F R+
Sbjct: 525 E--GIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRD 560
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 123/303 (40%), Gaps = 43/303 (14%)
Query: 7 VAGSSLAHMYMKSGSLVEGEKVIRLMPI--RNVIAWITLIAGKAQNGLAEDVLDQY-NLM 63
VA +SL Y +G L +P R+ + +I+ A+ A + + +L+
Sbjct: 89 VAATSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLL 148
Query: 64 RMVGFRPDKITFVSVISSCSELATLG--QGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
RPD +F +++S+ L + Q+ V+K+GA + V ++L+++Y +C
Sbjct: 149 ASGSLRPDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKCE 208
Query: 122 CLD---DSVKTFLECEYSDVVLWSSMIAAY-----------------------------G 149
L+ D+ K E D + W++M+ Y G
Sbjct: 209 ALEATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISG 268
Query: 150 FHGKGE--EAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVK---KYR 204
+ G EA LF +M + ++ TF S+L AC++ G G + + +
Sbjct: 269 YVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFV 328
Query: 205 RKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIA 264
+ L +V L +CG + A + NM K + + W T+LS D A +
Sbjct: 329 PEAALPVNNALVTLYSKCGNIAVARRIFDNMKSK-DVVSWNTILSGYVESSCLDKAVEVF 387
Query: 265 EEI 267
EE+
Sbjct: 388 EEM 390
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 66/127 (51%), Gaps = 11/127 (8%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE AG++L MY + G++ E + +MP + ++W +I+ Q+G + L+ +
Sbjct: 460 GFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHGHGREALELF 519
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVI------SSLI 114
+ M G PD+I+F++V+++C+ + +G Q + + D G+I + LI
Sbjct: 520 DRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKR-----DFGIIPGEDHYTRLI 574
Query: 115 SMYSRCG 121
+ R G
Sbjct: 575 DLLGRAG 581
>gi|356570919|ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Glycine max]
Length = 622
Score = 342 bits (876), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 171/442 (38%), Positives = 268/442 (60%), Gaps = 15/442 (3%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
D+V+ + + Y + G ++ MP RN++ W T+I+G A+N E ++ + +
Sbjct: 181 FDVVSWTCMIAGYHRCGDAKSARELFDRMPERNLVTWSTMISGYARNNCFEKAVETFEAL 240
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
+ G ++ V VISSC+ L L G++ H V++ SL++ + ++++ MY+RCG +
Sbjct: 241 QAEGVVANETVMVGVISSCAHLGALAMGEKAHEYVMRNKLSLNLILGTAVVDMYARCGNV 300
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
+ +V F + DV+ W+++IA HG E+A+ F +M +K F D+TF ++L AC
Sbjct: 301 EKAVMVFEQLPEKDVLCWTALIAGLAMHGYAEKALWYFSEMAKKGFVPRDITFTAVLTAC 360
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
SH G+ E+G+E F+ M + + +PRLEHY C+VDLLGR G L +A + MPVK NA I
Sbjct: 361 SHAGMVERGLEIFESMKRDHGVEPRLEHYGCMVDLLGRAGKLRKAEKFVLKMPVKPNAPI 420
Query: 244 WKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
W+ LL AC+ HK+ ++ R+ + +L + P+ + YVLLSNI+A A +W+ V+ R+ M++
Sbjct: 421 WRALLGACRIHKNVEVGERVGKILLEMQPEYSGHYVLLSNIYARANKWKDVTVMRQMMKD 480
Query: 304 RNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELT-SEMKLRGYVPDTGADMH 362
+ V+K PG S +EI +VH+FT+GDK+HP +I+ E++ ++KL GYV +T M
Sbjct: 481 KGVRKPPGYSLIEIDGKVHEFTIGDKTHPEIEKIERIWEDIILPKIKLAGYVGNTAETMF 540
Query: 363 DMDSEEKEYNLKHHSEKLAIAFA----------EHTRGLIVM----LPFKYISEIKNREI 408
D+D EEKE L HSEKLAIA+ + L V K IS++ E+
Sbjct: 541 DIDEEEKEGALHRHSEKLAIAYGIMKIRAPTPIRIVKNLRVCEDCHTATKLISKVFEVEL 600
Query: 409 IVRDASRFHHFRNGKCSCGDYW 430
IVRD +RFHHF+ G CSC DYW
Sbjct: 601 IVRDRNRFHHFKEGTCSCMDYW 622
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 128/308 (41%), Gaps = 41/308 (13%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
N+ + LI G + + E+ Y G PD IT ++ +C++L G Q H
Sbjct: 81 NLFIYNALIRGCSTSENPENSFHYYIKALRFGLLPDNITHPFLVKACAQLENAPMGMQTH 140
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGE 155
+ +K G D V +SL+ MY+ G ++ + F DVV W+ MIA Y G +
Sbjct: 141 GQAIKHGFEQDFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAGYHRCGDAK 200
Query: 156 EAINLFEQMEQKE----------------FE---------------ANDVTFVSLLYACS 184
A LF++M ++ FE AN+ V ++ +C+
Sbjct: 201 SARELFDRMPERNLVTWSTMISGYARNNCFEKAVETFEALQAEGVVANETVMVGVISSCA 260
Query: 185 HCG---LKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
H G + EK E+ V + + L T VVD+ RCG +++A + +P K +
Sbjct: 261 HLGALAMGEKAHEY----VMRNKLSLNLILGTAVVDMYARCGNVEKAVMVFEQLPEK-DV 315
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
+ W L++ H + A E+ G P+D +L+ + +G+ F
Sbjct: 316 LCWTALIAGLAMHGYAEKALWYFSEMAKKGFVPRDITFTAVLTACSHAGMVERGLEIFES 375
Query: 300 AMRERNVK 307
R+ V+
Sbjct: 376 MKRDHGVE 383
>gi|115471325|ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
gi|33146689|dbj|BAC80084.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50510012|dbj|BAD30625.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610797|dbj|BAF21175.1| Os07g0239600 [Oryza sativa Japonica Group]
Length = 720
Score = 342 bits (876), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 181/453 (39%), Positives = 257/453 (56%), Gaps = 29/453 (6%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVI-RLMPI-RNV-IAWITLIAGKAQNGLAEDVL 57
E D SSL MY K G L V P+ R++ AW T++AG QNG E+ L
Sbjct: 274 ALEGDAFVRSSLMDMYCKCGLLEAAASVFDHWSPLTRDMNFAWSTMVAGYVQNGREEEAL 333
Query: 58 DQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMY 117
D + M G D+ T SV ++C+ + + QG+Q+H V K LD + S+++ MY
Sbjct: 334 DLFRRMLREGVAADRFTLTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMY 393
Query: 118 SRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
++CG L+D+ F ++ +W+SM+ +Y HG+G AI LFE+M ++ N++T V
Sbjct: 394 AKCGNLEDARSIFDRACTKNIAVWTSMLCSYASHGQGRIAIELFERMTAEKMTPNEITLV 453
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
+L ACSH GL +G +F M ++Y P +EHY C+VDL GR G LD+A I +
Sbjct: 454 GVLSACSHVGLVSEGELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLDKAKNFIEENNI 513
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEF 297
AI+WKTLLSAC+ H+ + A +E+++ + DA YV+LSNI+A+ +W E
Sbjct: 514 NHEAIVWKTLLSACRLHQHNEYAKLASEKLVQLEQCDAGSYVMLSNIYATNNKWHDTFEL 573
Query: 298 REAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDT 357
R +M+ER V+K+PG SW+ +KN VH F GD SHP+S EI YLE+L +K GY T
Sbjct: 574 RVSMQERKVRKQPGRSWIHLKNTVHTFVAGDASHPQSAEIYAYLEKLVERLKEIGYTSRT 633
Query: 358 GADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP--------------------F 397
+HD++ E++E LK HSEKLAIAF I+ P
Sbjct: 634 DLVVHDVEDEQRETALKFHSEKLAIAFG------IISTPSGTPLRIFKNLRVCEDCHEAI 687
Query: 398 KYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
KYIS REI+VRD RFHHF++ CSC D+W
Sbjct: 688 KYISLATGREIVVRDLYRFHHFKDASCSCEDFW 720
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 128/257 (49%), Gaps = 13/257 (5%)
Query: 17 MKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFV 76
++SG ++ ++ P+R+ +W T+I+G ++G A D L M G + T+
Sbjct: 189 IQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQAGVVFNHYTYS 248
Query: 77 SVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYS 136
+ L G+Q+H V+ A D V SSL+ MY +CG L+ + F +S
Sbjct: 249 TAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASVFD--HWS 306
Query: 137 DVV-----LWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEK 191
+ WS+M+A Y +G+ EEA++LF +M ++ A+ T S+ AC++ G+ E+
Sbjct: 307 PLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQ 366
Query: 192 GMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSAC 251
G + V+K K + +VD+ +CG L++A ++ K N +W ++L +
Sbjct: 367 GRQVHGC-VEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDRACTK-NIAVWTSMLCSY 424
Query: 252 KTHKSTDMAGRIAEEIL 268
+H GRIA E+
Sbjct: 425 ASHGQ----GRIAIELF 437
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 71/155 (45%), Gaps = 1/155 (0%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVG-F 68
+S+ +++ + V P R W I+G A+ G D + + M G
Sbjct: 49 ASVLRFWVRRRRFHDARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEA 108
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
P+ +V+ C+ + + G+++H +++ G LDV + ++++ MY++CG + + +
Sbjct: 109 TPNAFVLAAVVRCCAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARR 168
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQ 163
F D V W+ I A G ++ LF++
Sbjct: 169 VFGAMAERDAVSWNIAIGACIQSGDILGSMQLFDE 203
>gi|115470597|ref|NP_001058897.1| Os07g0150000 [Oryza sativa Japonica Group]
gi|34393394|dbj|BAC82905.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610433|dbj|BAF20811.1| Os07g0150000 [Oryza sativa Japonica Group]
Length = 592
Score = 341 bits (875), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 175/447 (39%), Positives = 265/447 (59%), Gaps = 17/447 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIR--NVIAWITLIAGKAQNGLAEDVLD 58
GF + +SL H+Y G KV MP+R N+++W +++ A NG +VL
Sbjct: 146 GFVTLVFVQNSLVHLYGACGLFESAHKVFDEMPVRGRNLVSWNSMLNSFAANGRPNEVLT 205
Query: 59 QYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
+ M V F PD T VSV+++C+E L G+++H V K G + V ++LI +Y+
Sbjct: 206 VFWEMLGVDFAPDGFTIVSVLTACAEFGALALGRRVHVYVEKVGLVENSHVSNALIDLYA 265
Query: 119 RCGCLDDSVKTFLECEYS-DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
+CG ++D+ + F E VV W+S+I +G G+EA+ LF ME+++ ++T V
Sbjct: 266 KCGSVNDARRIFEEMGLGRTVVSWTSLIVGLAANGFGKEALELFSLMEREKLVPTEITMV 325
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
+LYACSHCGL + G +FD M + Y PR+EH C+VDLLGR G ++EA I MP+
Sbjct: 326 GVLYACSHCGLVDDGFRYFDRMKEDYGISPRIEHLGCMVDLLGRAGRVEEAYDYIITMPL 385
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEF 297
+ NA++W+TLL +C HK ++ E ++ ++P + YVLLSN++A+ W V
Sbjct: 386 EPNAVVWRTLLGSCAMHKKLELGKVAWERLVELDPGHSGDYVLLSNLYAAVGMWADVHVL 445
Query: 298 REAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDT 357
R+ M + V+K PG S +E++N V++F MGD+SHP S +I L E+ ++ GY+P T
Sbjct: 446 RKTMVKDRVRKNPGHSLVELRNSVYEFVMGDRSHPESEQIYEMLAEIAERLRREGYIPRT 505
Query: 358 GADMHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEI 403
+ D++ EEKE L +HSE+LAIAFA + G+ + + F IS++
Sbjct: 506 SNVLADIEEEEKETALNYHSERLAIAFALLKSLPGIPIRIIKNLRMCGDCHVAFNLISKV 565
Query: 404 KNREIIVRDASRFHHFRNGKCSCGDYW 430
+REIIVRD SRFHHF+ G CSC DYW
Sbjct: 566 YDREIIVRDRSRFHHFQGGACSCKDYW 592
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 90/181 (49%), Gaps = 3/181 (1%)
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
PD T+ +I +C+ L L +G+ +HAE K G V V +SL+ +Y CG + + K
Sbjct: 114 PDTHTYPPLIQACARLLALREGECLHAEAAKNGFVTLVFVQNSLVHLYGACGLFESAHKV 173
Query: 130 F--LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCG 187
F + ++V W+SM+ ++ +G+ E + +F +M +F + T VS+L AC+ G
Sbjct: 174 FDEMPVRGRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIVSVLTACAEFG 233
Query: 188 LKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTL 247
G + V+K ++DL +CG +++A + M + + W +L
Sbjct: 234 ALALGRR-VHVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRTVVSWTSL 292
Query: 248 L 248
+
Sbjct: 293 I 293
>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 751
Score = 341 bits (875), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 173/445 (38%), Positives = 257/445 (57%), Gaps = 15/445 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMP-IRNVIAWITLIAGKAQNGLAEDVLDQ 59
GFE + G++L MY KSG +V V ++ ++++ +I G + E L
Sbjct: 307 GFEYETFIGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALST 366
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ +R G P++ TF S+I +C+ A L G Q+H +VVK D V S+L+ MY +
Sbjct: 367 FVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGK 426
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG D S++ F E E D + W++++ + HG G AI F M + + N VTFV+L
Sbjct: 427 CGLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNL 486
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L CSH G+ E G+ +F M K Y P+ EHY+CV+DLLGR G L EA I NMP +
Sbjct: 487 LKGCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPFEP 546
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
N W + L ACK H + A A++++ + P+++ +VLLSNI+A K+W+ V R+
Sbjct: 547 NVFGWCSFLGACKIHGDMERAKFAADKLMKLEPENSGAHVLLSNIYAKEKQWEDVQSLRK 606
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
+++ N+ K PG SW++I+N+ H F + D SHP+ EI L+ L ++K GYVP T +
Sbjct: 607 MIKDGNMNKLPGYSWVDIRNKTHVFGVEDWSHPQKKEIYEKLDNLLDQIKRIGYVPQTES 666
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFAEHT--RGLIVML------------PFKYISEIKN 405
+ DMD KE L +HSE++A+AF+ T G+ +++ K+IS++
Sbjct: 667 VLIDMDDNLKEKLLHYHSERIAVAFSLLTCPTGMPIIVKKNLRVCSDCHSALKFISKVTE 726
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
R IIVRD SRFHHF NG CSCGDYW
Sbjct: 727 RNIIVRDISRFHHFSNGSCSCGDYW 751
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 125/256 (48%), Gaps = 5/256 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF +L GS+L MY K G L + K MP ++ + W ++I G +NG + L Y
Sbjct: 206 GFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAY 265
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M D+ S +S+CS L G+ +HA ++K G + + ++L MYS+
Sbjct: 266 MKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNALTDMYSKS 325
Query: 121 GCLDDSVKTF-LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G + + F + + +V +++I Y + E+A++ F + ++ E N+ TF SL
Sbjct: 326 GDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSL 385
Query: 180 LYACSHCGLKEKGMEFFDLMVK-KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+ AC++ E G + +VK ++R P + + +VD+ G+CG D + L +
Sbjct: 386 IKACANQAKLEHGSQLHGQVVKFNFKRDPFVS--STLVDMYGKCGLFDHSIQLFDEIE-N 442
Query: 239 ANAIIWKTLLSACKTH 254
+ I W TL+ H
Sbjct: 443 PDEIAWNTLVGVFSQH 458
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 89/171 (52%)
Query: 14 HMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKI 73
++Y K G L K+ M RN+++W ++I G A N ++ L + MR+ G +
Sbjct: 118 NLYSKCGELDYTIKLFDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQF 177
Query: 74 TFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLEC 133
SV+ +C+ L + G Q+H VVK G ++ V S+L MYS+CG L D+ K F E
Sbjct: 178 ALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEM 237
Query: 134 EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D VLW+SMI + +G ++A+ + +M + + S L ACS
Sbjct: 238 PCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACS 288
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 93/178 (52%), Gaps = 2/178 (1%)
Query: 71 DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTF 130
D T +I + + L +G+Q+HA +++ G + + + +++YS+CG LD ++K F
Sbjct: 74 DTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLF 133
Query: 131 LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKE 190
+ ++V W+S+I + + + +EA++ F QM + A S+L AC+ G +
Sbjct: 134 DKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQ 193
Query: 191 KGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
G + L+V K L + + D+ +CG L +A MP K +A++W +++
Sbjct: 194 FGTQVHCLVV-KCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCK-DAVLWTSMI 249
>gi|302786698|ref|XP_002975120.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
gi|300157279|gb|EFJ23905.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
Length = 485
Score = 341 bits (875), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 173/451 (38%), Positives = 270/451 (59%), Gaps = 26/451 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E+D++ G++L +MY K S+ E + NV++W ++A AQNG A L+ Y
Sbjct: 40 GLEVDVIVGTALVNMYGKCQSVEEARAAFEKISRPNVVSWSAMLAAYAQNGHARMALELY 99
Query: 61 NLMRMV--GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
M G P+++TF++++ +CS L L +G++IHA V + G D+ V ++L++ Y
Sbjct: 100 REMGSARKGMAPNRVTFITLLDACSFLGALAEGRKIHAAVAERGFDTDLVVCNALVNFYG 159
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
RCG L D+ F DV+ WSSMI+A+ G+ +EA+ L+ +M + +D+ F+S
Sbjct: 160 RCGSLGDAKIVFDGMRRRDVISWSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFIS 219
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+L+ACS+ G+ E +FF +V + +P LEHY C+VD+LGR G L +A L+R MP
Sbjct: 220 VLFACSNSGVVEASGDFFRSIVGDTQVEPTLEHYACMVDVLGRAGKLRDAEDLLRLMPFH 279
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
+++ T+LSACK + + AE + ++P++++PY+ L+NI+++AKR + + R
Sbjct: 280 PGPLLYMTMLSACKLYTDVERGEAAAEVVFELDPENSSPYITLANIYSAAKRPKDAARIR 339
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
+ M ER +KK+PG SW+E+ ++VH+F GDK HP+ EI ++ L +MK GY DT
Sbjct: 340 KLMEERGIKKKPGCSWIEVLDRVHEFIAGDKMHPQRDEIYAEIQRLGRQMKEAGYFQDTK 399
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKY 399
+ D++ +EKE L +HSEKLAIAF GLI P K
Sbjct: 400 VVLQDVEEDEKENLLWYHSEKLAIAF-----GLISTPPGAPLRIVKNLRVCSDCHAATKV 454
Query: 400 ISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
IS++ REI+VRD +RFHHF +G CSC DYW
Sbjct: 455 ISKVTGREILVRDTNRFHHFLDGMCSCNDYW 485
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 115/218 (52%), Gaps = 10/218 (4%)
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M + G +K+T+V+V+S + +L +G+++H+ V AG +DV V ++L++MY +C
Sbjct: 1 MEIRGVERNKVTYVTVLSGFTTPGSLEEGRRVHSRVAGAGLEVDVIVGTALVNMYGKCQS 60
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM--EQKEFEANDVTFVSLL 180
++++ F + +VV WS+M+AAY +G A+ L+ +M +K N VTF++LL
Sbjct: 61 VEEARAAFEKISRPNVVSWSAMLAAYAQNGHARMALELYREMGSARKGMAPNRVTFITLL 120
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC--VVDLLGRCGYLDEAAALIRNMPVK 238
ACS G +G + + + R + C +V+ GRCG L +A + M +
Sbjct: 121 DACSFLGALAEGRKIHAAVAE---RGFDTDLVVCNALVNFYGRCGSLGDAKIVFDGMR-R 176
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQD 274
+ I W +++SA D A + +L G P D
Sbjct: 177 RDVISWSSMISAFAQRGRVDEAMELYHRMLSEGTLPDD 214
>gi|218184628|gb|EEC67055.1| hypothetical protein OsI_33800 [Oryza sativa Indica Group]
Length = 513
Score = 341 bits (875), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 169/440 (38%), Positives = 261/440 (59%), Gaps = 15/440 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ GS+L MY + G + V + +N ++W LIAG A+ G E L + M+
Sbjct: 75 DVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQ 134
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
GF T+ SV S+ + + L QG+ +HA ++K+G L V ++++ MY++ G +
Sbjct: 135 RNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMI 194
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D+ K F + D+V W+SM+ A+ +G G EA+ FE+M + N +TF+S+L ACS
Sbjct: 195 DARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACS 254
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL ++G ++FD+M K++ +P ++HY VVDLLGR G L++A I MP+K A +W
Sbjct: 255 HGGLVKEGKQYFDMM-KEHNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVW 313
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
LL +C+ HK+ + A+ + ++P D P VLL NI+AS +W + R+ M+
Sbjct: 314 GALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRKMMKAT 373
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
VKKEP SW+EI+N VH F D +HPRS EI EE++ +++ GYVP+T + +
Sbjct: 374 GVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAGYVPNTDYVLLHV 433
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVML--------------PFKYISEIKNREIIV 410
D +E++ L++HSEK+A+AFA L + F+YIS++ REI+V
Sbjct: 434 DEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFRYISKVFEREIVV 493
Query: 411 RDASRFHHFRNGKCSCGDYW 430
RD +RFHHF +G CSCGDYW
Sbjct: 494 RDTNRFHHFSSGSCSCGDYW 513
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 118/219 (53%), Gaps = 2/219 (0%)
Query: 32 MPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQG 91
M R++ +W +LIAG AQN + ++ L M F+P+ TF S++ + A+ G G
Sbjct: 1 MSTRDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIG 60
Query: 92 QQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFH 151
+QIHA VK DV V S+L+ MY+RCG +D ++ F + E + V W+++IA +
Sbjct: 61 EQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARK 120
Query: 152 GKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEH 211
G GE + +F +M++ FEA T+ S+ A + G E+G M+K R
Sbjct: 121 GDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVG 180
Query: 212 YTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
T ++D+ + G + +A + ++ K + + W ++L+A
Sbjct: 181 NT-ILDMYAKSGSMIDARKVFDHVD-KKDLVTWNSMLTA 217
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 87/182 (47%), Gaps = 3/182 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G L G+++ MY KSGS+++ KV + ++++ W +++ AQ GL + + +
Sbjct: 172 GERLSAFVGNTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHF 231
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
MR G ++ITF+S++++CS + +G+Q + + ++ +++ + R
Sbjct: 232 EEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEHNLEPEIDHYVTVVDLLGRA 291
Query: 121 GCLDDS-VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G L+D+ V F +W +++ + H + I F E + +D L
Sbjct: 292 GLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAK--IGQFAADHVFELDPDDTGPPVL 349
Query: 180 LY 181
LY
Sbjct: 350 LY 351
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 341 bits (875), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 169/449 (37%), Positives = 262/449 (58%), Gaps = 24/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF L LV ++ MY K G + V ++++ W +I+ AQN ++ D +
Sbjct: 358 GFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIF 417
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G RP++ T VS++ C++ +L G+ IH+ + K G D+ + +S + MY+ C
Sbjct: 418 VHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANC 477
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +D + + F E D+ +W++MI+ + HG GE A+ LFE+ME ND+TF+ L
Sbjct: 478 GDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGAL 537
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
+ACSH GL ++G F MV ++ P++EHY C+VDLLGR G LDEA LI++MP++ N
Sbjct: 538 HACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPN 597
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
++ + L+ACK HK+ + A++ L + P + VL+SNI+ASA RW V+ R A
Sbjct: 598 IAVFGSFLAACKLHKNIKLGEWAAKQFLSLEPHKSGYNVLMSNIYASANRWGDVAYIRRA 657
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M++ + KEPGVS +E+ +H+F MGD+ HP + ++ ++E+ +++ GY PD
Sbjct: 658 MKDEGIVKEPGVSSIEVNGLLHEFIMGDREHPDAKKVYEMIDEMREKLEDAGYTPDVSCV 717
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
+H++D E+K L +HSEKLA+A+ GLI P K +S
Sbjct: 718 LHNIDKEKKVSALNYHSEKLAMAY-----GLISTAPGVPIRIVKNLRVCDDCHNATKLLS 772
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+I REIIVRD +RFHHF+ G CSC DYW
Sbjct: 773 KIYGREIIVRDRNRFHHFKEGSCSCCDYW 801
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 128/268 (47%), Gaps = 6/268 (2%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQ-NGLAEDVLDQYNLMRMVGF 68
++L MY+K +L +V + ++I+W +IA N L E V + M G
Sbjct: 266 TALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGV-RLFVKMLGEGM 324
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
P++IT +S++ C L G+ +HA ++ G +L + + ++ I MY +CG + +
Sbjct: 325 FPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARS 384
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F + D+++WS+MI++Y + +EA ++F M N+ T VSLL C+ G
Sbjct: 385 VFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGS 444
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
E G ++ + K K + T VD+ CG +D A L + +W ++
Sbjct: 445 LEMG-KWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAE-ATDRDISMWNAMI 502
Query: 249 SACKTHKSTDMAGRIAEEI--LGVNPQD 274
S H + A + EE+ LGV P D
Sbjct: 503 SGFAMHGHGEAALELFEEMEALGVTPND 530
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 136/285 (47%), Gaps = 6/285 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D+ ++L MY + GSL + + ++V++W T+I ++GL ++ LD
Sbjct: 154 GFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLL 213
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV--ISSLISMYS 118
M ++ +P +I +S+ +ELA L G+ +HA V++ G GV ++LI MY
Sbjct: 214 RDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYV 273
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+C L + + F + ++ W++MIAAY E + LF +M + N++T +S
Sbjct: 274 KCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLS 333
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
L+ C G E G + + L T +D+ G+CG + A ++ + K
Sbjct: 334 LVKECGTAGALELG-KLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSK 392
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLL 281
+ ++W ++S+ + D A I + G+ P + LL
Sbjct: 393 -DLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLL 436
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 104/228 (45%), Gaps = 2/228 (0%)
Query: 43 LIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAG 102
LI +N D Y MR D SV+ +C + + GQ++H VVK G
Sbjct: 95 LITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNG 154
Query: 103 ASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFE 162
DV V ++LI MYS G L + F + E DVV WS+MI +Y G +EA++L
Sbjct: 155 FHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLR 214
Query: 163 QMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYR-RKPRLEHYTCVVDLLGR 221
M + +++ +S+ + + + G +++ + K + T ++D+ +
Sbjct: 215 DMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVK 274
Query: 222 CGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILG 269
C L A + + KA+ I W +++A + + R+ ++LG
Sbjct: 275 CENLAYARRVFDGLS-KASIISWTAMIAAYIHCNNLNEGVRLFVKMLG 321
>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Vitis vinifera]
Length = 703
Score = 341 bits (874), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 185/474 (39%), Positives = 275/474 (58%), Gaps = 46/474 (9%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNG---LAEDVLDQ 59
E + V+ +++ Y + G + E ++ MP++ V+A +I G QNG A V DQ
Sbjct: 230 EKNEVSWTAMLMGYTQGGRIEEASELFDAMPVKAVVACNAMILGFGQNGEVAKARQVFDQ 289
Query: 60 ----------------------------YNLMRMVGFRPDKITFVSVISSCSELATLGQG 91
+ LM+ G + + + +SV+S C+ LA+L G
Sbjct: 290 IREKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLASLDHG 349
Query: 92 QQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFH 151
+Q+HAE+VK+ DV V S LI+MY +CG L + + F D+V+W+S+I Y H
Sbjct: 350 RQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQH 409
Query: 152 GKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEH 211
G EEA+ +F +M + VTFV +L ACS+ G ++G+E F+ M KY +P+ EH
Sbjct: 410 GLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLVEPKTEH 469
Query: 212 YTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVN 271
Y C+VDLLGR G +++A LI+ MPV+A+AIIW LL AC+TH + ++A A+++L +
Sbjct: 470 YACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALLGACRTHMNMNLAEVAAKKLLQLE 529
Query: 272 PQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMG-DKS 330
P++A PY+LLSNI+AS RW V+E R MR + V K PG SW+E++ +VH FT G
Sbjct: 530 PKNAGPYILLSNIYASKGRWGDVAELRRNMRVKKVSKSPGCSWIEVEKRVHMFTGGVSTK 589
Query: 331 HPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFA--EHT 388
HP I LE+L ++ GY PD+ +HD+D EEK +L HHSE+LA+AF +
Sbjct: 590 HPELSSIMKMLEKLDGMLREAGYYPDSSFVLHDVDEEEKVRSLGHHSERLAVAFGLLKVP 649
Query: 389 RGLIVML------------PFKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
G+ + + K I++I REII+RDA+RFHHF++G CSC DYW
Sbjct: 650 EGMPIRVMKNLRVCGDCHSAIKLIAKITGREIILRDANRFHHFKDGFCSCRDYW 703
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 143/304 (47%), Gaps = 17/304 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+VA +++ Y + G L E ++ MP RNVI+W T+I+G QNG + + +M
Sbjct: 170 DVVARTNMISGYCQEGRLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVM- 228
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIH--AEVVKAGASLDVGVISSLISMYSRCGC 122
P+K + +S + L QG +I +E+ A V +++I + + G
Sbjct: 229 -----PEK----NEVSWTAMLMGYTQGGRIEEASELFDAMPVKAVVACNAMILGFGQNGE 279
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
+ + + F + D WS+MI Y G EA+NLF M+++ ++N + +S+L
Sbjct: 280 VAKARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSV 339
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
C+ + G + +VK + + + ++ + +CG L +A + K + +
Sbjct: 340 CASLASLDHGRQVHAELVKS-QFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPK-DIV 397
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEILGVN-PQDAAPYV-LLSNIHASAKRWQGVSEFREA 300
+W ++++ H + A ++ E+ D +V +LS + K +G+ F E+
Sbjct: 398 MWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIF-ES 456
Query: 301 MRER 304
M+ +
Sbjct: 457 MKSK 460
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 93/187 (49%), Gaps = 9/187 (4%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F+ D+ S L MY+K G LV+ ++ ++++ W ++I G AQ+GL E+ L ++
Sbjct: 361 FDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQHGLVEEALQVFH 420
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV--ISSLISMYSR 119
M G D +TFV V+S+CS + +G +I E +K+ ++ + ++ + R
Sbjct: 421 EMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIF-ESMKSKYLVEPKTEHYACMVDLLGR 479
Query: 120 CGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFH---GKGEEAINLFEQMEQKEFEANDVT 175
G ++D++ + +D ++W +++ A H E A Q+E K A
Sbjct: 480 AGLVNDAMDLIQKMPVEADAIIWGALLGACRTHMNMNLAEVAAKKLLQLEPK--NAGPYI 537
Query: 176 FVSLLYA 182
+S +YA
Sbjct: 538 LLSNIYA 544
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 98/202 (48%), Gaps = 16/202 (7%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E + V+ + L Y+K+ + E K MP RNV++W ++ G Q GL + +
Sbjct: 75 ERNTVSWNGLISGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQ 134
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAE--VVKAGASLDVGVISSLISMYSRC 120
M P+K +V+S L L Q ++I + DV +++IS Y +
Sbjct: 135 M------PEK----NVVSWTVMLGGLIQVRRIDEARGLFDIMPVKDVVARTNMISGYCQE 184
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L ++ + F E +V+ W++MI+ Y +G+ + A LFE M +K N+V++ ++L
Sbjct: 185 GRLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVMPEK----NEVSWTAML 240
Query: 181 YACSHCGLKEKGMEFFDLMVKK 202
+ G E+ E FD M K
Sbjct: 241 MGYTQGGRIEEASELFDAMPVK 262
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 102/260 (39%), Gaps = 51/260 (19%)
Query: 7 VAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV 66
+A +S Y + G + +V MP + +++W +++AG QN N R
Sbjct: 17 IAYNSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQN----------NRPREA 66
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
+ DK+ + +S + LIS Y + + ++
Sbjct: 67 RYLFDKMPERNTVS-----------------------------WNGLISGYVKNRMVSEA 97
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHC 186
K F +VV W++M+ Y G EA LF QM +K N V++ +L
Sbjct: 98 RKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQMPEK----NVVSWTVMLGGLIQV 153
Query: 187 GLKEKGMEFFDLM-VKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
++ FD+M VK + + C + G L EA L MP + N I W
Sbjct: 154 RRIDEARGLFDIMPVKDVVARTNMISGYC------QEGRLAEARELFDEMP-RRNVISWT 206
Query: 246 TLLSACKTHKSTDMAGRIAE 265
T++S + D+A ++ E
Sbjct: 207 TMISGYVQNGQVDVARKLFE 226
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 90/204 (44%), Gaps = 18/204 (8%)
Query: 111 SSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFE 170
+S I+ Y+R G ++ + + F E +V W+SM+A Y + + EA LF++M ++
Sbjct: 20 NSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMPER--- 76
Query: 171 ANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAA 230
N V++ L+ + + + FD M ++ + +T +V + G + EA
Sbjct: 77 -NTVSWNGLISGYVKNRMVSEARKAFDTMPER-----NVVSWTAMVRGYVQEGLVSEAET 130
Query: 231 LIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKR 290
L MP K N + W +L + D A R +I+ V +D + + + R
Sbjct: 131 LFWQMPEK-NVVSWTVMLGGLIQVRRIDEA-RGLFDIMPV--KDVVARTNMISGYCQEGR 186
Query: 291 WQGVSEFREAMRERNVKKEPGVSW 314
E + M RNV +SW
Sbjct: 187 LAEARELFDEMPRRNV-----ISW 205
>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Glycine max]
Length = 778
Score = 341 bits (874), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 168/415 (40%), Positives = 246/415 (59%), Gaps = 24/415 (5%)
Query: 35 RNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQI 94
+ V AW +I+G AQ+GL E + + M F P+ +T S++S+C++L L G+ +
Sbjct: 369 KTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSV 428
Query: 95 HAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKG 154
H + ++ V ++LI MY++CG + ++ + F + V W++MI YG HG G
Sbjct: 429 HQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYG 488
Query: 155 EEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC 214
+EA+ LF +M F+ + VTF+S+LYACSH GL +G E F MV KYR +P EHY C
Sbjct: 489 DEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHYAC 548
Query: 215 VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQD 274
+VD+LGR G L++A IR MPV+ +W TLL AC HK T++A +E + ++P +
Sbjct: 549 MVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIHKDTNLARVASERLFELDPGN 608
Query: 275 AAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRS 334
YVLLSNI++ + + + REA+++RN+ K PG + +E+ H F GD+SH ++
Sbjct: 609 VGYYVLLSNIYSVERNFPKAASVREAVKKRNLSKTPGCTLIEVNGTPHVFVCGDRSHSQT 668
Query: 335 MEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVM 394
I LEELT +M+ GY +T +HD++ EEKE HSEKLAIAF GLI
Sbjct: 669 TSIYAKLEELTGKMREMGYQSETVTALHDVEEEEKELMFNVHSEKLAIAF-----GLITT 723
Query: 395 LP-------------------FKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
P K+IS+I R I+VRDA+RFHHF++G CSCGDYW
Sbjct: 724 EPGTEIRIIKNLRVCLDCHAATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 778
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 134/288 (46%), Gaps = 3/288 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D + L ++ K + + ++ +++++ LI+G + NG E + +
Sbjct: 234 GFHFDDYVLTGLISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYF 293
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ + G R T V +I S L I VK+G L V ++L ++YSR
Sbjct: 294 RELLVSGQRVSSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRL 353
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
+D + + F E V W++MI+ Y G E AI+LF++M EF N VT S+L
Sbjct: 354 NEIDLARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSIL 413
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+ G G L +K + + T ++D+ +CG + EA+ L ++ + N
Sbjct: 414 SACAQLGALSFGKSVHQL-IKSKNLEQNIYVSTALIDMYAKCGNISEASQLF-DLTSEKN 471
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASA 288
+ W T++ H D A ++ E+L + Q ++ LS ++A +
Sbjct: 472 TVTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSS-VTFLSVLYACS 518
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 118/269 (43%), Gaps = 4/269 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ +L S+L +Y K + KV MP R+ + W T+I G +N +D + +
Sbjct: 133 GFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVF 192
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G R D T +V+ + +E+ + G I +K G D V++ LIS++S+C
Sbjct: 193 KDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKC 252
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
+D + F D+V ++++I+ + +G+ E A+ F ++ + T V L+
Sbjct: 253 EDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLI 312
Query: 181 YACSHCGLKEKGMEFFDLMVKKYR-RKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
S G VK +P + T + + R +D A L K
Sbjct: 313 PVSSPFGHLHLACCIQGFCVKSGTILQPSVS--TALTTIYSRLNEIDLARQLFDESSEKT 370
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEIL 268
A W ++S T+MA + +E++
Sbjct: 371 VA-AWNAMISGYAQSGLTEMAISLFQEMM 398
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
E ++ ++L MY K G++ E ++ L +N + W T+I G +G ++ L +N
Sbjct: 437 LEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYGDEALKLFN 496
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQI-HAEVVK 100
M +GF+P +TF+SV+ +CS + +G +I HA V K
Sbjct: 497 EMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNK 536
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 115/270 (42%), Gaps = 9/270 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G++ DL + L G+ + +P ++ + LI G + + A +
Sbjct: 35 GYQHDLATVTKLTQKLFDVGATRHARALFFSVPKPDIFLFNVLIKGFSFSPDASSISFYT 94
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+L++ PD T+ IS+ + G +HA V G ++ V S+L+ +Y +
Sbjct: 95 HLLKNTTLSPDNFTYAFAISASPDD---NLGMCLHAHAVVDGFDSNLFVASALVDLYCKF 151
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
+ + K F + D VLW++MI + ++++ +F+ M + + T ++L
Sbjct: 152 SRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQGVRLDSTTVATVL 211
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY--TCVVDLLGRCGYLDEAAALIRNMPVK 238
A + + GM L +K + Y T ++ + +C +D A L+ M K
Sbjct: 212 PAVAEMQEVKVGMGIQCLALK---LGFHFDDYVLTGLISVFSKCEDVD-TARLLFGMIRK 267
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEIL 268
+ + + L+S + T+ A + E+L
Sbjct: 268 PDLVSYNALISGFSCNGETECAVKYFRELL 297
>gi|242035229|ref|XP_002465009.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
gi|241918863|gb|EER92007.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
Length = 684
Score = 341 bits (874), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 178/446 (39%), Positives = 267/446 (59%), Gaps = 19/446 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +D+V +SL MY K+G +V R+MP RN ++W LI+G AQNG A++ LD +
Sbjct: 242 GMRMDVVIATSLVDMYAKNGHFDVARQVFRMMPYRNAVSWNALISGFAQNGHADEALDLF 301
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVI--SSLISMYS 118
M G +PD VS + +C+++ L G+ IH +++ L+ I ++++ MYS
Sbjct: 302 REMSTSGLQPDSGALVSALLACADVGFLKLGKSIHGFILR---RLEFQCILGTAVLDMYS 358
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+CG L+ + K F + D+VLW++MIA G HG G +A+ LF+++ + + + TF S
Sbjct: 359 KCGSLESARKLFNKLSSRDLVLWNAMIACCGTHGCGHDALALFQELNETGIKPDHATFAS 418
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
LL A SH GL E+G +FD M+ ++ +P +H CVVDLL R G ++EA ++ +M +
Sbjct: 419 LLSALSHSGLVEEGKFWFDRMITEFGIEPTEKHCVCVVDLLARSGLVEEANEMLASMHTE 478
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
IW LLS C +K ++ IA++IL P+D L+SN++A+AK+W V E R
Sbjct: 479 PTIPIWVALLSGCLNNKKLELGETIAKKILESQPEDIGVLALVSNLYAAAKKWDKVREIR 538
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
+ M++ KK PG S +E+ H F M D+SHP+ EI + +L+ EM+ GYVP T
Sbjct: 539 KLMKDSGSKKVPGYSLIEVHGTRHAFVMEDQSHPQHQEILKMISKLSFEMRKMGYVPRTE 598
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAF-----AEHTRGLIVML---------PFKYISEIK 404
HD+D + KE L +HSE+LAIAF + TR +I+ KYIS+I
Sbjct: 599 FVYHDLDEDVKEQLLSYHSERLAIAFGLLNTSPGTRLVIIKNLRVCGDCHDAIKYISKIV 658
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
+REI+VRDA RFHHF++G CSCGDYW
Sbjct: 659 DREIVVRDAKRFHHFKDGACSCGDYW 684
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 152/309 (49%), Gaps = 5/309 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ D+ S+L H+Y + G++ + +V MP ++ +AW T++AG G + L Y
Sbjct: 141 GYGRDVFVCSALLHVYSRCGAMGDAIRVFDGMPRKDHVAWSTMVAGFVSAGRPVEALGMY 200
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ MR G D++ V VI +C+ G +H ++ G +DV + +SL+ MY++
Sbjct: 201 SRMREHGVAEDEVVMVGVIQACTLTGNTRMGASVHGRFLRHGMRMDVVIATSLVDMYAKN 260
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G D + + F Y + V W+++I+ + +G +EA++LF +M + + VS L
Sbjct: 261 GHFDVARQVFRMMPYRNAVSWNALISGFAQNGHADEALDLFREMSTSGLQPDSGALVSAL 320
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+ G + G ++++ + L T V+D+ +CG L+ A L + + +
Sbjct: 321 LACADVGFLKLGKSIHGFILRRLEFQCILG--TAVLDMYSKCGSLESARKLFNKLSSR-D 377
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
++W +++ C TH A + +E+ G+ P A LLS + S +G F
Sbjct: 378 LVLWNAMIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFD 437
Query: 299 EAMRERNVK 307
+ E ++
Sbjct: 438 RMITEFGIE 446
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 125/270 (46%), Gaps = 7/270 (2%)
Query: 11 SLAHMYMKSGSLVEGEKVIRLMPIRN--VIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
SLA Y + G+L E + P + AW L+A +++ G L + +
Sbjct: 49 SLAAAYARVGALDAAESTLAASPSSRSCIPAWNALLAARSRAGSPGAALRVFRALPSSA- 107
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
RPD TF +++C+ L L + + AG DV V S+L+ +YSRCG + D+++
Sbjct: 108 RPDSTTFTLALTACARLGDLDAAEAVRVRAFAAGYGRDVFVCSALLHVYSRCGAMGDAIR 167
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F D V WS+M+A + G+ EA+ ++ +M + ++V V ++ AC+ G
Sbjct: 168 VFDGMPRKDHVAWSTMVAGFVSAGRPVEALGMYSRMREHGVAEDEVVMVGVIQACTLTGN 227
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
G ++ R + T +VD+ + G+ D A + R MP + NA+ W L+
Sbjct: 228 TRMGASVHGRFLRHGMRMD-VVIATSLVDMYAKNGHFDVARQVFRMMPYR-NAVSWNALI 285
Query: 249 SACKTHKSTDMAGRIAEEI--LGVNPQDAA 276
S + D A + E+ G+ P A
Sbjct: 286 SGFAQNGHADEALDLFREMSTSGLQPDSGA 315
>gi|224091973|ref|XP_002309422.1| predicted protein [Populus trichocarpa]
gi|222855398|gb|EEE92945.1| predicted protein [Populus trichocarpa]
Length = 582
Score = 341 bits (874), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 178/445 (40%), Positives = 270/445 (60%), Gaps = 20/445 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G ++D G+ L MY+KSG + G K+ MP + +I W +I G AQNGLA +VL+ Y
Sbjct: 143 GLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLITWNAMINGYAQNGLANNVLELY 202
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M GF PD +T V V+SSC+ L L G+++ ++ G S + + ++L++MY+RC
Sbjct: 203 KEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVERKMEGFGFSSNPFLNNALVNMYARC 262
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L + F VV W+++I YG HG+GE A+ LF++M + + + FVS+L
Sbjct: 263 GNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVAVGLFDEMIRGGIKPDGTAFVSVL 322
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL KG+++F +M +KY +P EHY+C+VDLLGR G L+EA LI +M V+A+
Sbjct: 323 SACSHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMVDLLGRAGRLNEARELIESMQVRAD 382
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+W LL ACK H++ ++A E+++ + P + YVLLSN++ A +G+ R
Sbjct: 383 GALWGALLGACKIHRNVELAELAFEQVIELEPTNTGYYVLLSNVYTEAGNLEGILRVRML 442
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
MR+R +KK+PG S++E K +VH F GD++HP++ EI L EL + +K G
Sbjct: 443 MRKRKLKKDPGCSYVEFKGRVHLFFAGDRNHPQTNEIYKKLNELENLVK-----DLDGCK 497
Query: 361 MHDMDSEEKEYN-LKHHSEKLAIAFA-----EHTRGLIVM---------LPFKYISEIKN 405
+D + E+ N + HSEKLA+AFA + T +I+ L K +S+I +
Sbjct: 498 KNDHERREEYLNSMGVHSEKLAVAFALLNTRKETEIIIIKNLRICGDCHLFIKLVSKIVD 557
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
R+ +VRDA+RFHHF+NG CSC +YW
Sbjct: 558 RQFVVRDATRFHHFKNGFCSCKEYW 582
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 146/316 (46%), Gaps = 10/316 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPI--RNVIAWITLIAGKAQNGLAEDVLD 58
G L+ +SL MY K + K+ P + + + +L++G A N +DV+
Sbjct: 40 GCLLEPFVQTSLISMYGKCSLIDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVV 99
Query: 59 QYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
+ MR +G + +T + ++ C LG G +H VK G +D V + L++MY
Sbjct: 100 LFCEMRELGVEINGVTMLGLVQPCGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYV 159
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+ G +D K F E ++ W++MI Y +G + L+++ME K F + +T V
Sbjct: 160 KSGEIDCGRKLFDEMPRKGLITWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVG 219
Query: 179 LLYACSHCGLKEKGMEFFDLMVK-KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
+L +C+H G G E M + P L + +V++ RCG L +A + MPV
Sbjct: 220 VLSSCAHLGALSVGKEVERKMEGFGFSSNPFLNN--ALVNMYARCGNLKKARDIFDGMPV 277
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVS 295
K+ + W ++ H ++A + +E++ G+ P A +LS + +G+
Sbjct: 278 KS-VVSWTAIIGGYGMHGQGEVAVGLFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLD 336
Query: 296 EFREAMRERNVKKEPG 311
F + ER PG
Sbjct: 337 YF--GVMERKYGLRPG 350
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 88/186 (47%), Gaps = 4/186 (2%)
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
G P+ TF I SC+ L+ G+Q+H V K G L+ V +SLISMY +C +D++
Sbjct: 5 GASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSLIDNA 64
Query: 127 VKTFLECEYSD--VVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
K F E S V ++S+++ Y + + ++ + LF +M + E N VT + L+ C
Sbjct: 65 RKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLVQPCG 124
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
G GM V K+ C++ + + G +D L MP K I W
Sbjct: 125 IPGNLGLGMCVHGFCV-KFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKG-LITW 182
Query: 245 KTLLSA 250
+++
Sbjct: 183 NAMING 188
>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
Length = 635
Score = 341 bits (874), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 167/440 (37%), Positives = 261/440 (59%), Gaps = 15/440 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ GS+L MY + + +V + +N ++W LIAG A+ G E L ++ M+
Sbjct: 197 DVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGFARKGDGETTLMKFAEMQ 256
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
GF T+ SV S+ + + L QG+ +HA ++K+G L V ++++ MY++ G +
Sbjct: 257 RNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKLTAFVANTILGMYAKSGSMV 316
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D+ K F + D+V W++M+ A+ +G G+EA+ FE++ + + N +TF+S+L ACS
Sbjct: 317 DARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQLNQITFLSVLTACS 376
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL ++G ++FD+M K Y +P ++HY VDLLGR G L EA + MP++ A +W
Sbjct: 377 HGGLVKEGKQYFDMM-KDYNVEPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVW 435
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
LL AC+ HK+ + A+ + ++P+D P VLL NI+AS +W + R+ M+
Sbjct: 436 GALLGACRMHKNAKIGQYAADHVFELDPEDTGPPVLLYNIYASTGQWDDAARVRKMMKAT 495
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
VKKEP SW+EI+N VH F D +HP+S EI EE+ + +K GYVP+T + +
Sbjct: 496 GVKKEPACSWVEIENSVHMFVADDSTHPKSEEIYRMWEEVNTRIKKAGYVPNTDYVLLHI 555
Query: 365 DSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNREIIV 410
+E+E L++HSEK+A+AFA G + + F+Y+SE+ REI+V
Sbjct: 556 KEQERETKLQYHSEKIALAFALINMPAGATIRIMKNIRICGDCHSAFRYVSEVFKREIVV 615
Query: 411 RDASRFHHFRNGKCSCGDYW 430
RD +RFHHF NG CSCGDYW
Sbjct: 616 RDTNRFHHFSNGSCSCGDYW 635
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 121/241 (50%), Gaps = 2/241 (0%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+SL HMY K G++ + V +P R+V++W LI G AQN + + L M FR
Sbjct: 101 NSLIHMYCKCGAVSDARHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFR 160
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P TF S + + G G+Q+HA VK DV V S+L+ MY+RC +D +++
Sbjct: 161 PSGFTFTSFLKAAGACGGRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRV 220
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F + + V W+++IA + G GE + F +M++ F A T+ S+ A + G
Sbjct: 221 FDWLDSKNEVSWNALIAGFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGAL 280
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
E+G M+K ++ T ++ + + G + +A + + + + + W T+L+
Sbjct: 281 EQGRWVHAHMIKSGQKLTAFVANT-ILGMYAKSGSMVDARKVFDRVDQR-DLVTWNTMLT 338
Query: 250 A 250
A
Sbjct: 339 A 339
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 91/194 (46%), Gaps = 2/194 (1%)
Query: 57 LDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISM 116
L + +L+ P + S+I++C++ L + IH+ + ++ + D +++SLI M
Sbjct: 47 LRELDLLLTGELAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHM 106
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
Y +CG + D+ F DVV W+ +I Y + EA+ L M + F + TF
Sbjct: 107 YCKCGAVSDARHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTF 166
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
S L A CG + G + L V KY + + ++D+ RC +D A + +
Sbjct: 167 TSFLKAAGACGGRGIGEQMHALAV-KYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLD 225
Query: 237 VKANAIIWKTLLSA 250
K N + W L++
Sbjct: 226 SK-NEVSWNALIAG 238
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 85/182 (46%), Gaps = 3/182 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +L +++ MY KSGS+V+ KV + R+++ W T++ AQ GL ++ + +
Sbjct: 294 GQKLTAFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHF 353
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+R G + ++ITF+SV+++CS + +G+Q + ++ S + + R
Sbjct: 354 EEIRKYGIQLNQITFLSVLTACSHGGLVKEGKQYFDMMKDYNVEPEIDHYVSFVDLLGRA 413
Query: 121 GCLDDS-VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G L ++ + F +W +++ A H + I + E + D L
Sbjct: 414 GLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAK--IGQYAADHVFELDPEDTGPPVL 471
Query: 180 LY 181
LY
Sbjct: 472 LY 473
>gi|297740626|emb|CBI30808.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 341 bits (874), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 179/444 (40%), Positives = 252/444 (56%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ D ++L Y + + +V NV+ W L+ G N ED L +
Sbjct: 217 GYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVF 276
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G P++ +F S ++SC L L G++IH VK G DV V +SLI MY RC
Sbjct: 277 GEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRC 336
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L+D V F ++V W+S+I HG G A+ F QM + E +++TF LL
Sbjct: 337 GNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLL 396
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH G+ +KG F + + +L+HY C+VD+LGR G L+EA LIRNMPVKAN
Sbjct: 397 SACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKAN 456
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+++W LLSAC H ++A R A+ I+ + P ++ YVLLSN++ASA RW VS R
Sbjct: 457 SMVWLVLLSACTMHSKLEVAERAAKCIIDLEPHCSSAYVLLSNLYASASRWSDVSRIRRE 516
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M++R + K+PG SW+ IK ++F GD+SHP S I LE L ++K GYVPD
Sbjct: 517 MKQRGITKQPGRSWITIKGWRNEFLSGDRSHPSSDRIYQKLEWLGGKLKELGYVPDQRFA 576
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNR 406
+HD++ E+KE L +HSE+LAI F G + + K I++I R
Sbjct: 577 LHDVEDEQKEVMLSYHSERLAIGFGLISTVEGSTITVMKNLRVCGDCHSAIKLIAKIVRR 636
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
+IIVRD++RFHHF +G+CSCGDYW
Sbjct: 637 KIIVRDSTRFHHFMDGRCSCGDYW 660
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 139/254 (54%), Gaps = 8/254 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ A +S+ + Y +G + +G ++ + MP RNVI+W ++I G Q+G +E+ L + M
Sbjct: 118 DIAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMM 177
Query: 65 MVGF--RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
G +P T+ VI++C+ + L QG QIHA V K G S D + ++LI+ Y+ C
Sbjct: 178 GCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQ 237
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
++DS++ F + +VV+W++++ YG + K E+A+ +F +M ++ N +F S L +
Sbjct: 238 MEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNS 297
Query: 183 CSHCGLK--EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
C CGL+ + G E VK + +V + RCG L++ + + + K N
Sbjct: 298 C--CGLEALDWGREIHTAAVKLGLETDVFVGNSLIV-MYYRCGNLNDGVVIFKRIS-KKN 353
Query: 241 AIIWKTLLSACKTH 254
+ W +++ C H
Sbjct: 354 IVSWNSVIVGCAQH 367
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
++++ + E V + +V + +I G A+N + L + M + D +++
Sbjct: 5 HLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPV----KDVVSW 60
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
S+I C + A L +++ E+ + V +++I+ + + G ++ + F + +
Sbjct: 61 NSMIKGCFDCADLTMARKLFDEMPER----SVVSWTTMINGFLQFGKIEVAEGLFYKMPF 116
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
D+ W+SMI Y +G+ E+ + LF++M + N +++ S++ G E+ +
Sbjct: 117 RDIAAWNSMIYGYCCNGRVEDGLRLFQEMPCR----NVISWTSMIGGLDQHGRSEEALGL 172
Query: 196 F-DLMVKKYRRKPRLEHYTCVV 216
F +M KP Y CV+
Sbjct: 173 FRQMMGCGVEVKPTSSTYCCVI 194
>gi|449446466|ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 341 bits (874), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 171/449 (38%), Positives = 273/449 (60%), Gaps = 24/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
+L++ ++L +Y K G + + V MP R+V+ W ++ AG QN + E L +
Sbjct: 195 AMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALF 254
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
G + D+ SVI +C+ LA + +G+Q++A + K+G ++ V SSLI MY++C
Sbjct: 255 RKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLIDMYAKC 314
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +++S K F + E +VVLW++MI+ H + E + LFE+M+Q NDVTFVS+L
Sbjct: 315 GGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVL 374
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC H GL KG ++FDLM K++ P + HY+C+VD L R G + EA LI +P A+
Sbjct: 375 SACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNAS 434
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A +W +LL++C+TH + ++A A+++ + P ++ Y+LLSN++A+ +W V++ R+
Sbjct: 435 ASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWDEVAKMRKL 494
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
++E +VKKE G SW+EIK++VH F +G+++HP+ +EI L E+ E++ GY +T D
Sbjct: 495 LKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMDELQKLGYKVETQHD 554
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPFKYISEIKN--------------- 405
+H + K+ L+HHSEKLA T GL+ + P I +KN
Sbjct: 555 LHQVGESIKQELLRHHSEKLAF-----TMGLLFLPPNAPIRIMKNLRICGDCHSFMKLAS 609
Query: 406 ----REIIVRDASRFHHFRNGKCSCGDYW 430
R++IVRD +RFHHF+NG CSCGD+W
Sbjct: 610 KFFCRDVIVRDTNRFHHFKNGCCSCGDFW 638
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 144/284 (50%), Gaps = 4/284 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + DL+ + L +MY K GS+ +V MP R++++W T+I QNG + LD
Sbjct: 94 GLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLL 153
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G + T SV+ +C+ L + Q +HA +KA L+V V ++L+ +Y++C
Sbjct: 154 LQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKC 213
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + D+V F VV WSSM A Y + E+A+ LF + + + + S++
Sbjct: 214 GLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVI 273
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+ +G + + ++ K + + ++D+ +CG ++E+ + R++ K N
Sbjct: 274 CACAGLAAMIEGKQ-MNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVE-KRN 331
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLS 282
++W ++S H + + E++ +G++P D +LS
Sbjct: 332 VVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLS 375
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 95/182 (52%), Gaps = 5/182 (2%)
Query: 68 FRPDKITFV-SVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
F ++FV ++ C++ L QG+ HA+++ G D+ + LI+MYS+CG +D +
Sbjct: 59 FNATHVSFVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFA 118
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC-SH 185
+ F E +V W++MI + +G+ EA++L QM+++ ++ T S+L AC +
Sbjct: 119 RQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAK 178
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
C L E + K + T ++D+ +CG + +A + +MP ++ + W
Sbjct: 179 CALSE--CQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRS-VVTWS 235
Query: 246 TL 247
++
Sbjct: 236 SM 237
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 340 bits (873), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 179/450 (39%), Positives = 272/450 (60%), Gaps = 25/450 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE DL ++L Y K G L +V M R+VI+W ++IA AQNG++ + ++ +
Sbjct: 291 GFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIF 350
Query: 61 NLMRMVG-FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ M G + +T +V+ +C+ + G+ IH +V+K G +V V +S+I MY +
Sbjct: 351 HRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCK 410
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG ++ + K F +V WS+M+A YG HG +EA+ +F +M + N +TFVS+
Sbjct: 411 CGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSV 470
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L ACSH GL E+G +F M ++ +P +EHY C+VDLLGR GYL EA LI+ M ++
Sbjct: 471 LAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRP 530
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
+ ++W LL AC+ HK+ D+ A ++ ++P++ YVLLSNI+A A RW+ V R
Sbjct: 531 DFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRI 590
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M+ + K PG S ++IK +VH F +GD+ HP+ +I YLE+L+ +++ GYVPD +
Sbjct: 591 LMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPDMTS 650
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYI 400
+HD+ EEKE L+ HSEKLA+AF G++ +P K+I
Sbjct: 651 VLHDVGHEEKEMVLRVHSEKLAVAF-----GIMNTVPGTTIHIIKNLRVCGDCHTAIKFI 705
Query: 401 SEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
S+I +REI+VRD+ RFHHFR+G CSCGDYW
Sbjct: 706 SKIVDREIVVRDSKRFHHFRDGLCSCGDYW 735
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 151/323 (46%), Gaps = 15/323 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE DL S+L MY K G L + + + RN+++W ++I G QN A L +
Sbjct: 182 GFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALLLF 241
Query: 61 N--LMRMVGFRPD------KITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISS 112
L+ G D I VSV+S+CS ++ + +H ++K G D+GV ++
Sbjct: 242 KEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENT 301
Query: 113 LISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM-EQKEFEA 171
L+ Y++CG L S + F DV+ W+S+IA Y +G E++ +F +M + E
Sbjct: 302 LMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINY 361
Query: 172 NDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAAL 231
N VT ++L AC+H G + G D ++ K + + T ++D+ +CG ++ A
Sbjct: 362 NAVTLSAVLLACAHSGSQRLGKCIHDQVI-KMGLESNVFVGTSIIDMYCKCGKVEMARKA 420
Query: 232 IRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEE--ILGVNPQDAAPYVLLSNIHASAK 289
M K N W +++ H A + E + GV P +L+ +
Sbjct: 421 FDRMREK-NVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGL 479
Query: 290 RWQGVSEFREAMRERNVKKEPGV 312
+G F+ E +V EPGV
Sbjct: 480 LEEGWHWFKAMSHEFDV--EPGV 500
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 116/224 (51%), Gaps = 14/224 (6%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
NV +W ++IA A++G + + L ++ MR + +P++ TF I SCS L L G+Q H
Sbjct: 116 NVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAH 175
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGE 155
+ + G D+ V S+L+ MYS+CG L D+ F E + ++V W+SMI Y +
Sbjct: 176 QQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAH 235
Query: 156 EAINLFEQMEQKEFEA--------NDVTFVSLLYACSHCGLKE--KGMEFFDLMVKKYRR 205
A+ LF++ +E + + + VS+L ACS K +G+ F L+ + +
Sbjct: 236 RALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGF-LIKRGFEG 294
Query: 206 KPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
+E+ ++D +CG L + + M + + I W ++++
Sbjct: 295 DLGVEN--TLMDAYAKCGELGVSRRVFDGMAER-DVISWNSIIA 335
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 52/120 (43%), Gaps = 12/120 (10%)
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS-----HCGLKE 190
++V W+S+IA G EA+ F M + + N TF + +CS H G +
Sbjct: 115 TNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQA 174
Query: 191 KGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+ +P L + +VD+ +CG L +A L + + N + W ++++
Sbjct: 175 HQQALI------FGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHR-NIVSWTSMITG 227
>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
[Vitis vinifera]
Length = 707
Score = 340 bits (873), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 172/446 (38%), Positives = 268/446 (60%), Gaps = 17/446 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D+ G+S+ MY K G++ V M RN I+W ++++G QNG D L +
Sbjct: 263 GFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLF 322
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
N M+ P+ +T + ++S+CS L + G+++H V+ + +D + ++++ MY +C
Sbjct: 323 NQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKC 382
Query: 121 GCLDDSVKTFLECEYS--DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
G LD +V+ F CE DV W+ +I+ YG HG G+EA+ LF +M+ + E ND+TF S
Sbjct: 383 GDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTS 442
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+L ACSH GL ++G + F M K R P ++HY C+VD+LGR G+L+EA LI+ +P +
Sbjct: 443 ILSACSHAGLIDEGRKCFADMTKLSVR-PEMKHYACMVDMLGRAGFLNEAFRLIKKIPSR 501
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
+ +W LL AC+ H +T++ A + + P+ YVL+SNI+A++ +W+ V R
Sbjct: 502 PSDEVWGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVR 561
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
+ M+ R +KK S +E +VH F D+S P E+ +E L EMK+ GYVPD
Sbjct: 562 QNMKSRGLKKPAAFSVIEFGTEVHGFHTADQSSPYYREVYRKVESLAIEMKMVGYVPDLS 621
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIK 404
+HD++ E+KE+ L +HSEKLA+AF + +G+ + + FK+IS I
Sbjct: 622 CVLHDVEPEDKEHLLNYHSEKLAVAFGIMKMDQGMPIQVTKNLRVCSDCHWAFKFISSIY 681
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
R+IIVRD +RFHHF+ G+CSCGDYW
Sbjct: 682 GRKIIVRDGNRFHHFQGGRCSCGDYW 707
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 138/287 (48%), Gaps = 8/287 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF DL ++L MY K G + + +V M IR+V+ W +I Q L +
Sbjct: 162 GFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLF 221
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ GF D+IT +SV S+ +L +H V G DV V +S++ MY++C
Sbjct: 222 RKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAKC 281
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ + F E + + W+SM++ Y +G+ +A++LF QM+ E + N VT + ++
Sbjct: 282 GNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMV 341
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACS+ G K G + + ++ + ++D+ +CG LD A + N +
Sbjct: 342 SACSYLGSKHLGRKLHNFVISS-KMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGER 400
Query: 241 AI-IWKTLLSACKTH----KSTDMAGRIAEEILGVNPQDAAPYVLLS 282
+ W L+S H ++ ++ R+ E GV P D +LS
Sbjct: 401 DVSSWNVLISGYGVHGHGKEALELFSRMQVE--GVEPNDITFTSILS 445
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 104/215 (48%), Gaps = 14/215 (6%)
Query: 42 TLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSC-SELATLGQGQQIHAEVVK 100
T++ A G + + +D Y M+ +G + T+ V+ C SEL + G+ +H +VV+
Sbjct: 102 TMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAV-FGEVVHGQVVR 160
Query: 101 AGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINL 160
G D+ V ++L+ MY++CG + D+ + F DVV W++MI Y + +A+ L
Sbjct: 161 TGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALML 220
Query: 161 FEQMEQKEFEANDVTFVSLLYACSHCG-----LKEKGMEFFDLMVKKYRRKPRLEHYTCV 215
F +M+++ F +++T +S+ A G + G + + +
Sbjct: 221 FRKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAVLNGFIGDVSVG------NSI 274
Query: 216 VDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
V + +CG ++ A + M + N I W ++LS
Sbjct: 275 VGMYAKCGNVERARLVFDRMEER-NGISWNSMLSG 308
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 83/184 (45%), Gaps = 20/184 (10%)
Query: 78 VISSCSELATLGQGQQIHAEVVKAGASLDVG-VISSLISMYSRCGCLDDSVKTF------ 130
++ C+ L TL + IH+ + G L ++ LI +YS+ G L + F
Sbjct: 31 LLQCCTSLTTL---KLIHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSARTLFDHRHHH 87
Query: 131 --LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
+ + L ++M+ AY G+ EAI+L+ M++ N+ T+ +L C+
Sbjct: 88 HHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCA---- 143
Query: 189 KEKGMEFFDLMVKKYRRK---PRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
E G F +++ + R L +VD+ +CG + +A + M ++ + + W
Sbjct: 144 SELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIR-DVVCWT 202
Query: 246 TLLS 249
+++
Sbjct: 203 AMIT 206
>gi|359483597|ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial [Vitis vinifera]
Length = 676
Score = 340 bits (873), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 179/444 (40%), Positives = 252/444 (56%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ D ++L Y + + +V NV+ W L+ G N ED L +
Sbjct: 233 GYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVF 292
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G P++ +F S ++SC L L G++IH VK G DV V +SLI MY RC
Sbjct: 293 GEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRC 352
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L+D V F ++V W+S+I HG G A+ F QM + E +++TF LL
Sbjct: 353 GNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLL 412
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH G+ +KG F + + +L+HY C+VD+LGR G L+EA LIRNMPVKAN
Sbjct: 413 SACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKAN 472
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+++W LLSAC H ++A R A+ I+ + P ++ YVLLSN++ASA RW VS R
Sbjct: 473 SMVWLVLLSACTMHSKLEVAERAAKCIIDLEPHCSSAYVLLSNLYASASRWSDVSRIRRE 532
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M++R + K+PG SW+ IK ++F GD+SHP S I LE L ++K GYVPD
Sbjct: 533 MKQRGITKQPGRSWITIKGWRNEFLSGDRSHPSSDRIYQKLEWLGGKLKELGYVPDQRFA 592
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNR 406
+HD++ E+KE L +HSE+LAI F G + + K I++I R
Sbjct: 593 LHDVEDEQKEVMLSYHSERLAIGFGLISTVEGSTITVMKNLRVCGDCHSAIKLIAKIVRR 652
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
+IIVRD++RFHHF +G+CSCGDYW
Sbjct: 653 KIIVRDSTRFHHFMDGRCSCGDYW 676
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 139/254 (54%), Gaps = 8/254 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ A +S+ + Y +G + +G ++ + MP RNVI+W ++I G Q+G +E+ L + M
Sbjct: 134 DIAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMM 193
Query: 65 MVGF--RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
G +P T+ VI++C+ + L QG QIHA V K G S D + ++LI+ Y+ C
Sbjct: 194 GCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQ 253
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
++DS++ F + +VV+W++++ YG + K E+A+ +F +M ++ N +F S L +
Sbjct: 254 MEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNS 313
Query: 183 CSHCGLK--EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
C CGL+ + G E VK + +V + RCG L++ + + + K N
Sbjct: 314 C--CGLEALDWGREIHTAAVKLGLETDVFVGNSLIV-MYYRCGNLNDGVVIFKRIS-KKN 369
Query: 241 AIIWKTLLSACKTH 254
+ W +++ C H
Sbjct: 370 IVSWNSVIVGCAQH 383
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
++++ + E V + +V + +I G A+N + L + M + D +++
Sbjct: 21 HLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPV----KDVVSW 76
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
S+I C + A L +++ E+ + V +++I+ + + G ++ + F + +
Sbjct: 77 NSMIKGCFDCADLTMARKLFDEMPER----SVVSWTTMINGFLQFGKIEVAEGLFYKMPF 132
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
D+ W+SMI Y +G+ E+ + LF++M + N +++ S++ G E+ +
Sbjct: 133 RDIAAWNSMIYGYCCNGRVEDGLRLFQEMPCR----NVISWTSMIGGLDQHGRSEEALGL 188
Query: 196 F-DLMVKKYRRKPRLEHYTCVV 216
F +M KP Y CV+
Sbjct: 189 FRQMMGCGVEVKPTSSTYCCVI 210
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 340 bits (873), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 166/440 (37%), Positives = 263/440 (59%), Gaps = 14/440 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+++ +++ + G + MP R+ ++W +I G Q ++VL + M+
Sbjct: 285 DVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQ 344
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+PD+ T VS++++C+ L L G+ I A + K +D V ++LI MY CG ++
Sbjct: 345 AANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVE 404
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+++ F + D + W+++I +G GEEA+++F QM + ++VT + +L AC+
Sbjct: 405 KAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPDEVTCIGVLCACT 464
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H G+ +KG +FF M ++ +P + HY C+VDLLGR G+L EA +I+NMPVK N+I+W
Sbjct: 465 HSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVW 524
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
+LL AC+ H+ +MA A++IL + P++ A YVLL NI+A+ RW+ + E R+ M +R
Sbjct: 525 GSLLGACRVHRDEEMAEMAAQQILELEPENGAVYVLLCNIYAACNRWEKLHEVRKLMMDR 584
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
+KK PG S +E+ VH+F GD+ HP+S EI L+E++ ++K GY PDT D+
Sbjct: 585 GIKKTPGCSLIEMNGSVHEFVAGDQVHPQSKEIYSKLDEMSVDLKFAGYSPDTSEVFLDI 644
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPF--------------KYISEIKNREIIV 410
EEKE + HSEKLAIAF + G V + K +S++ NRE+IV
Sbjct: 645 GEEEKESAVYRHSEKLAIAFGLISSGPGVTIRIVKNLRMCVDCHYVAKLVSKVYNREVIV 704
Query: 411 RDASRFHHFRNGKCSCGDYW 430
RD +RFHHFR+G CSC DYW
Sbjct: 705 RDRTRFHHFRHGSCSCKDYW 724
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 169/370 (45%), Gaps = 24/370 (6%)
Query: 20 GSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVI 79
G + V MP N W +I G ++ G + Y M G PD+ T+ ++
Sbjct: 67 GDMEYARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLL 126
Query: 80 SSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVV 139
+ + G+++H +VK G S +V V ++LI +YS G + + F DVV
Sbjct: 127 KRFTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVV 186
Query: 140 LWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGM-EFFDL 198
W+ MI+ Y + +E++ LF++ME+ + +T VS+L ACS LK+ + +
Sbjct: 187 TWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSK--LKDLNVGKRVHR 244
Query: 199 MVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTD 258
VK + +P ++D+ CG +D A + NM + + I W +++
Sbjct: 245 YVKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSR-DVISWTAIVTGFTNLGQVG 303
Query: 259 MAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGV-SEFREAMRERNVKKE--PGVSWL 315
+A +++ +D + + + + R++ V S FRE M+ N+K + VS L
Sbjct: 304 LARNYFDKM---PERDFVSWTAMIDGYLQVNRFKEVLSLFRE-MQAANIKPDEFTMVSIL 359
Query: 316 EIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMH----DMDSEEKEY 371
+ +G+ I Y+++ +E+K+ +V + DM+ +++ + +
Sbjct: 360 TACAHLGALELGE-------WIKAYIDK--NEIKIDSFVGNALIDMYFNCGNVEKAIRIF 410
Query: 372 NLKHHSEKLA 381
N H +K++
Sbjct: 411 NAMPHRDKIS 420
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 127/279 (45%), Gaps = 33/279 (11%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF ++ ++L H+Y SG + V +V+ W +I+G ++ ++ + +
Sbjct: 149 GFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLF 208
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M + P IT VSV+S+CS+L L G+++H V + ++LI MY+ C
Sbjct: 209 DEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAAC 268
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEF----------- 169
G +D ++ F + DV+ W++++ + G+ A N F++M +++F
Sbjct: 269 GDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYL 328
Query: 170 --------------------EANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRL 209
+ ++ T VS+L AC+H G E G E+ + K K
Sbjct: 329 QVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELG-EWIKAYIDKNEIKIDS 387
Query: 210 EHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
++D+ CG +++A + MP + + I W ++
Sbjct: 388 FVGNALIDMYFNCGNVEKAIRIFNAMPHR-DKISWTAVI 425
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 98/207 (47%), Gaps = 3/207 (1%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
++D G++L MY G++ + ++ MP R+ I+W +I G A NG E+ LD ++
Sbjct: 383 IKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFS 442
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEV-VKAGASLDVGVISSLISMYSRC 120
M PD++T + V+ +C+ + +G++ A + + G +V ++ + R
Sbjct: 443 QMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRA 502
Query: 121 GCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G L ++ + + ++W S++ A H E A +Q+ + E E N +V L
Sbjct: 503 GHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELEPE-NGAVYVLL 561
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRK 206
+ C EK E LM+ + +K
Sbjct: 562 CNIYAACNRWEKLHEVRKLMMDRGIKK 588
>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 630
Score = 340 bits (873), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 167/444 (37%), Positives = 265/444 (59%), Gaps = 16/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E D+ S+L ++ K G + V M + I W ++I G AQN ++ L+ +
Sbjct: 189 GLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELF 248
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ GF ++ T SV+ +C+ LA L G Q H +VK L + ++L+ MY +C
Sbjct: 249 KRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILN--NALVDMYCKC 306
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L+D+++ F + + DV+ WS+MI+ +G +EA+ LFE+M+ + N +T V +L
Sbjct: 307 GSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVL 366
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
+ACSH GL E G +F M K Y P EHY C++DLLG+ G LD+A L+ M + +
Sbjct: 367 FACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPD 426
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A+ W+TLL AC+ ++ +A A++++ ++P+DA Y LLSNI+A++++W V E R
Sbjct: 427 AVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTR 486
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
MR+R +KKEPG SW+E+ Q+H F +GD SHP+ +E+ L +L + GYVP+T
Sbjct: 487 MRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFV 546
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPF--------------KYISEIKNR 406
+ D++ E+ E +L+HHSEKLA+AF T + ++ K S+++ R
Sbjct: 547 LQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIR 606
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
I++R R+HHF++GKCSCGDYW
Sbjct: 607 SIVIRGPIRYHHFQDGKCSCGDYW 630
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 139/256 (54%), Gaps = 7/256 (2%)
Query: 12 LAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPD 71
L +MY+K L + ++ MP RNVI+W T+I+ ++ + + L+ LM RP+
Sbjct: 102 LINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPN 161
Query: 72 KITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFL 131
T+ SV+ SC+ ++ + + +H ++K G DV V S+LI ++++ G +D++ F
Sbjct: 162 VYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFD 218
Query: 132 ECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEK 191
E D ++W+S+I + + + + A+ LF++M++ F A T S+L AC+ L E
Sbjct: 219 EMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLEL 278
Query: 192 GMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSAC 251
GM+ + + KY + L + +VD+ +CG L++A + M + + I W T++S
Sbjct: 279 GMQAH-VHIVKYDQDLILNN--ALVDMYCKCGSLEDALRVFNQMKER-DVITWSTMISGL 334
Query: 252 KTHKSTDMAGRIAEEI 267
+ + A ++ E +
Sbjct: 335 AQNGYSQEALKLFERM 350
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 97/202 (48%), Gaps = 21/202 (10%)
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
G D T+ +I C + +G I + G + +++ LI+MY + L+D+
Sbjct: 56 GLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDA 115
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS-- 184
+ F + +V+ W++MI+AY ++A+ L M + N T+ S+L +C+
Sbjct: 116 HQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGM 175
Query: 185 ------HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
HCG+ ++G+E D+ V+ + ++D+ + G ++A ++ M V
Sbjct: 176 SDVRMLHCGIIKEGLE-SDVFVR-----------SALIDVFAKLGEPEDALSVFDEM-VT 222
Query: 239 ANAIIWKTLLSACKTHKSTDMA 260
+AI+W +++ + +D+A
Sbjct: 223 GDAIVWNSIIGGFAQNSRSDVA 244
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 340 bits (873), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 166/434 (38%), Positives = 263/434 (60%), Gaps = 15/434 (3%)
Query: 11 SLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRP 70
SL MY K G + + + M N+I W +I+G A+NG A+D +D ++ M RP
Sbjct: 262 SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRP 321
Query: 71 DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTF 130
D I+ S IS+C+++ +L Q + + V ++ DV + S+LI M+++CG ++ + F
Sbjct: 322 DTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVF 381
Query: 131 LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKE 190
DVV+WS+MI YG HG+ EAI+L+ ME+ NDVTF+ LL AC+H G+
Sbjct: 382 DRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVR 441
Query: 191 KGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+G FF+ M ++ P+ +HY C++DLLGR G+LD+A +I+ MPV+ +W LLSA
Sbjct: 442 EGWWFFNRMAD-HKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500
Query: 251 CKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEP 310
CK H+ ++ A+++ ++P + YV LSN++A+A+ W V+E R M+E+ + K+
Sbjct: 501 CKKHRHVELGKYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDV 560
Query: 311 GVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKE 370
G SW+E++ ++ F +GDKSHPR EI+ +E + S +K G+V + A +HD++ EE E
Sbjct: 561 GCSWVEVRGRLEGFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAE 620
Query: 371 YNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNREIIVRDASRF 416
L HSE++ IA+ +G + + K IS++ REI+VRD +RF
Sbjct: 621 ETLCSHSERITIAYGLISTPQGTTLRITKNLRACVNCHAATKLISKLVGREIVVRDTNRF 680
Query: 417 HHFRNGKCSCGDYW 430
HHF++G CSCGDYW
Sbjct: 681 HHFKDGVCSCGDYW 694
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 148/285 (51%), Gaps = 6/285 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPI--RNVIAWITLIAGKAQNGLAEDVLD 58
GFE D+ + L +Y K L V +P+ R +++W +++ AQNG + L+
Sbjct: 149 GFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALE 208
Query: 59 QYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
++ MR + +PD + VSV+++ + L L QG+ IHA V+K G + ++ SL +MY+
Sbjct: 209 IFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYA 268
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+CG + + F + + +++LW++MI+ Y +G ++AI+LF +M K+ + ++ S
Sbjct: 269 KCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITS 328
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+ AC+ G E+ + D V + + + + ++D+ +CG + E A + + +
Sbjct: 329 AISACAQVGSLEQA-RWMDEYVSRSDYRDDVFISSALIDMFAKCGSV-ECARSVFDRTLD 386
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRI--AEEILGVNPQDAAPYVLL 281
+ ++W ++ H A + A E GV+P D LL
Sbjct: 387 RDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLL 431
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 116/244 (47%), Gaps = 6/244 (2%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+ L H G + +V +P V W +I G ++N +D L Y+ M++
Sbjct: 57 TKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVS 116
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
PD TF ++ +C L+ L G+ +HA+V + G DV V + LI++Y++C L +
Sbjct: 117 PDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTV 176
Query: 130 F--LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCG 187
F L +V W+++++AY +G+ EA+ +F QM + + + + V VS+L A +
Sbjct: 177 FEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQ 236
Query: 188 LKEKGMEFF-DLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKT 246
E+G +M +P L + + +CG + A L M N I+W
Sbjct: 237 DLEQGRSIHASVMKMGLETEPDL--LISLNTMYAKCGQVATAKILFDKMK-SPNLILWNA 293
Query: 247 LLSA 250
++S
Sbjct: 294 MISG 297
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 66/149 (44%), Gaps = 3/149 (2%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ S+L M+ K GS+ V R+V+ W +I G +G A + + Y M
Sbjct: 357 DVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAME 416
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G P+ +TF+ ++ +C+ + +G + + + +I + R G LD
Sbjct: 417 RDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRMADHKINPQQQHYACIIDLLGRAGHLD 476
Query: 125 DSVKTFLECE--YSDVVLWSSMIAAYGFH 151
+ + ++C V +W ++++A H
Sbjct: 477 QAYEV-IKCMPVQPGVTVWGALLSACKKH 504
>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
Length = 1740
Score = 340 bits (873), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 169/410 (41%), Positives = 260/410 (63%), Gaps = 14/410 (3%)
Query: 35 RNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQI 94
+++++W +IA N + + +D + M PD I+ SV+ +C +L+ L G++I
Sbjct: 1258 KSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRI 1317
Query: 95 HAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKG 154
H VV+ ++ + ++LI MY++CGCL+ + + F + ++ DVV W+SMI+AYG +GKG
Sbjct: 1318 HEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKG 1377
Query: 155 EEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC 214
+A++LF +M+ + + FVS+L ACSH GL ++G +F LM ++ + PR+EH+ C
Sbjct: 1378 RDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVC 1437
Query: 215 VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQD 274
+VDLLGR G +DEA I+ MP++ N +W LLSAC+ + + + A+++ + P+
Sbjct: 1438 MVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQ 1497
Query: 275 AAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRS 334
+ YVLLSNI+A A RW+ V+ R M+ + +KK PGVS E+ N+VH F GD+SHP+S
Sbjct: 1498 SGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQS 1557
Query: 335 MEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFA--------- 385
+I L+ L +MK GYVP+T + +HD++ E+KE +L HSEKLAIAFA
Sbjct: 1558 KQIYEELDVLVGKMKEAGYVPETDSALHDVEEEDKECHLAVHSEKLAIAFAILNTAPGSP 1617
Query: 386 -EHTRGLIVM----LPFKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
T+ L V + K IS+I REI +RD +RFHHF NG CSCGDYW
Sbjct: 1618 IRITKNLRVCGDCHIAAKLISKIVGREITIRDTNRFHHFYNGVCSCGDYW 1667
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 133/289 (46%), Gaps = 47/289 (16%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +L++ G+ L MY K G LVE +V+ MP R+V++W +L+AG A+NG +D L+
Sbjct: 1156 GLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQFDDALEVC 1215
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M ++G +PD T S++ + +
Sbjct: 1216 KEMELLGLKPDAGTMASLLPAVTNT----------------------------------- 1240
Query: 121 GCLDDSV---KTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
CLD+ + F++ +V W+ MIA Y + EA+++F QME + + ++
Sbjct: 1241 -CLDNVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIA 1299
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
S+L AC G + +V+K R +P L ++D+ +CG L+ A + M
Sbjct: 1300 SVLPACGDLSALLLGRRIHEYVVRK-RLQPNLLLENALIDMYAKCGCLEYAREVFDQMKF 1358
Query: 238 KANAIIWKTLLSA----CKTHKSTDMAGRIAEEILGVNPQDAAPYVLLS 282
+ + + W +++SA K + + R+ + LG+NP A +LS
Sbjct: 1359 R-DVVSWTSMISAYGMNGKGRDAVSLFSRMQD--LGLNPDSIAFVSVLS 1404
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 139/313 (44%), Gaps = 18/313 (5%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G L Y G + +P +NV+ + +I N L D L + M G
Sbjct: 1063 GIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGI 1122
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
PD T+ V+ + S L G QIHA VV+ G L+V V + LISMY +CGCL ++ +
Sbjct: 1123 DPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACR 1182
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
Z DVV W+S++A +G+ ++A+ + ++ME + + T SLL A ++ L
Sbjct: 1183 VLDZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCL 1242
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM---PVKANAIIWK 245
+ F M K K L + ++ + EA + M V +AI
Sbjct: 1243 --DNVSFVKEMFMKLANK-SLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIA 1299
Query: 246 TLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSN----IHASAKRWQGVSEFREAM 301
++L AC + + RI E ++ Q P +LL N ++A + E + M
Sbjct: 1300 SVLPACGDLSALLLGRRIHEYVVRKRLQ---PNLLLENALIDMYAKCGCLEYAREVFDQM 1356
Query: 302 RERNVKKEPGVSW 314
+ R+V VSW
Sbjct: 1357 KFRDV-----VSW 1364
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 51/91 (56%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
+ +L+ ++L MY K G L +V M R+V++W ++I+ NG D + ++
Sbjct: 1326 LQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFS 1385
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQ 92
M+ +G PD I FVSV+S+CS L +G+
Sbjct: 1386 RMQDLGLNPDSIAFVSVLSACSHAGLLDEGR 1416
>gi|296084465|emb|CBI25024.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 340 bits (873), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 174/446 (39%), Positives = 273/446 (61%), Gaps = 26/446 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
++ G++L +Y K G + + V MP R+ + W +++AG QN L E+ L ++ +
Sbjct: 182 NVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQ 241
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+G ++ T S +S+C+ A L +G+Q+ A K G ++ VISSLI MY++CG ++
Sbjct: 242 AMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIE 301
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
++ F E +VVLW+++++ + H + EA+ FE+M+Q ND+T++S+L ACS
Sbjct: 302 EAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACS 361
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL EKG ++FDLM++ + P + HY+C+VD+LGR G L EA I MP A A +W
Sbjct: 362 HLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMW 421
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
+LL++C+ +++ ++A A+ + + P +A +VLLSNI+A+ RW+ V+ R ++E
Sbjct: 422 GSLLASCRIYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYAANDRWEEVARARNLLKES 481
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
KKE G SW+EIK++VH F +G+++HPR +EI L LE+L EMK GY T D+HD+
Sbjct: 482 KAKKERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKTEHDLHDV 541
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP--------------------FKYISEIK 404
+ K+ L+HHSEKLA+ F I++LP K S I
Sbjct: 542 EESRKQELLRHHSEKLALTFG------IMVLPHGAPIRIMKNLRICGDCHSFMKLASSIT 595
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
REIIVRD +RFHHF+NG CSCG++W
Sbjct: 596 EREIIVRDTNRFHHFKNGYCSCGEFW 621
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 140/286 (48%), Gaps = 8/286 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D + + L +MY K G + K+ MP+R++++W T++ QNG E L +
Sbjct: 77 GLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLF 136
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G + T SV+ +C+ + + +Q+H +K +V V ++L+ +Y++C
Sbjct: 137 MQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKC 196
Query: 121 GCLDDSVKTFLEC--EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
G + D+ F EC E SDV WSSM+A Y + EEA+ LF + + E N T S
Sbjct: 197 GLVKDANLVF-ECMPERSDVT-WSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISS 254
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
L AC+ +G + + K + + ++D+ +CG ++EA + ++ K
Sbjct: 255 ALSACAARAALIEGKQVQAVSCKT-GIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEK 313
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLS 282
N ++W +LS H + A E++ +G+ P D +LS
Sbjct: 314 -NVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLS 358
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 88/163 (53%), Gaps = 6/163 (3%)
Query: 90 QGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYG 149
+G HA++++ G D + L++MYS+CG ++ + K F E +V W++M+ ++
Sbjct: 65 EGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHT 124
Query: 150 FHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH--CGLKEKGMEFFDLMVKKYRRKP 207
+G E+A+ LF QM+++ ++ T S++ AC+ C + K + F L K
Sbjct: 125 QNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFAL---KTALDS 181
Query: 208 RLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+ T ++D+ +CG + +A + MP +++ + W ++++
Sbjct: 182 NVFVGTALLDVYAKCGLVKDANLVFECMPERSD-VTWSSMVAG 223
>gi|356561762|ref|XP_003549147.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g66520-like [Glycine max]
Length = 622
Score = 340 bits (873), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 180/443 (40%), Positives = 270/443 (60%), Gaps = 17/443 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
DL + ++L Y+ SG++ +++ M R+V++W T+IAG Q G + LD ++ M
Sbjct: 180 DLYSWNTLIAAYVGSGNMSLAKELFDGMRERDVVSWSTIIAGYVQVGCFMEALDFFHKML 239
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+G +P++ T VS +++CS L L QG+ IHA + K ++ +++S+I MY++CG ++
Sbjct: 240 QIGPKPNEYTLVSALAACSNLVALDQGKWIHAYIGKGEIKMNERLLASIIDMYAKCGEIE 299
Query: 125 DSVKTFLECEYSDVV-LWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
+ + F E + V LW++MI + HG EAIN+FEQM+ ++ N VTF++LL AC
Sbjct: 300 SASRVFFEHKVKQKVWLWNAMIGGFAMHGMPNEAINVFEQMKVEKISPNKVTFIALLNAC 359
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
SH + E+G +F LMV Y P +EHY C+VDLL R G L EA +I +MP+ + I
Sbjct: 360 SHGYMVEEGKLYFRLMVSDYAITPEIEHYGCMVDLLSRSGLLKEAEDMISSMPMAPDVAI 419
Query: 244 WKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMR- 302
W LL+AC+ +K + RI I G++P +VLLSNI++++ RW RE
Sbjct: 420 WGALLNACRIYKDMERGYRIGRIIKGMDPNHIGCHVLLSNIYSTSGRWNEARILREKNEI 479
Query: 303 ERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMH 362
R+ KK PG S +E+K HQF +GD+SHP+S EI +L+E+T+++K GYVP+ G +H
Sbjct: 480 SRDRKKIPGCSSIELKGTFHQFLVGDQSHPQSREIYSFLDEMTTKLKSAGYVPELGELLH 539
Query: 363 DMDSEE-KEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNRE 407
D+D EE KE L HSEKLAIAF G + + K+IS++ NR
Sbjct: 540 DIDDEEDKETALSVHSEKLAIAFGLMNTANGTPIRIVKNLRVCGDCHQATKFISKVYNRV 599
Query: 408 IIVRDASRFHHFRNGKCSCGDYW 430
IIVRD +R+HHF +G CSC DYW
Sbjct: 600 IIVRDRTRYHHFEDGICSCKDYW 622
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 32/238 (13%)
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+L + +G P++ +FV S+C + +G+Q+ VK G +V V+++LI MY +
Sbjct: 104 SLTQDLGLFPNRYSFVFAFSACGNGLGVQEGEQVRIHAVKVGLENNVFVVNALIGMYGKW 163
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYG-----------FHGKGE-------------- 155
G + +S K F D+ W+++IAAY F G E
Sbjct: 164 GLVGESQKVFQWAVDRDLYSWNTLIAAYVGSGNMSLAKELFDGMRERDVVSWSTIIAGYV 223
Query: 156 ------EAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRL 209
EA++ F +M Q + N+ T VS L ACS+ ++G ++ + K K
Sbjct: 224 QVGCFMEALDFFHKMLQIGPKPNEYTLVSALAACSNLVALDQG-KWIHAYIGKGEIKMNE 282
Query: 210 EHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEI 267
++D+ +CG ++ A+ + VK +W ++ H + A + E++
Sbjct: 283 RLLASIIDMYAKCGEIESASRVFFEHKVKQKVWLWNAMIGGFAMHGMPNEAINVFEQM 340
>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
Length = 878
Score = 340 bits (873), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 174/449 (38%), Positives = 267/449 (59%), Gaps = 25/449 (5%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
+E + G++L Y K + E + +++ ++V++W ++ AQ G ++ + +
Sbjct: 435 YECTSIVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFI 494
Query: 62 LMRMVGFRPDKITFVSVISSC-SELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M M G +P++ T SVI +C S A + G+Q HA +K + V S+L+SMY+R
Sbjct: 495 KMTMHGLKPNEFTISSVIDACASPTAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARK 554
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ + F D+V W+SM++ Y HG ++A+++F QME + E + VTF+S++
Sbjct: 555 GSIESAQCIFERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSVI 614
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
C+H GL E+G +FD M + Y P +EHY C+VDL R G LDEA +LI M A
Sbjct: 615 MGCAHAGLVEEGQRYFDSMARDYGITPTMEHYACMVDLYSRAGKLDEAMSLIEGMSFPAG 674
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
++W+TLL ACK HK+ ++ AE++L + P D+A YVLLSNI+++A +W+ E R+
Sbjct: 675 PMVWRTLLGACKVHKNVELGKLAAEKLLSLEPFDSATYVLLSNIYSAAGKWKEKDEVRKL 734
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M + VKKE G SW++IKN+VH F DKSHP S +I L +T+++K GY PDT
Sbjct: 735 MDTKKVKKEAGCSWIQIKNKVHSFIASDKSHPLSEQIYAKLRAMTTKLKQEGYCPDTSFA 794
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
+H++ E+KE L HSE+LA+AF GLI P K +S
Sbjct: 795 LHEVAEEQKEAMLAMHSERLALAF-----GLIATPPGAPLHIFKNLRVCGDCHTVIKMVS 849
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+I++REI++RD SRFHHF +G CSCGD+W
Sbjct: 850 KIEDREIVMRDCSRFHHFNSGVCSCGDFW 878
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 143/288 (49%), Gaps = 9/288 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ G+SL MYMK S+V+G KV MP RNV+ W +L+ G Q+G DV++ + MR
Sbjct: 138 DVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRMR 197
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G P+ +TF SV+S + + G+++HA+ VK G V V +SL++MY++CG ++
Sbjct: 198 AEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVE 257
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
++ F E D+V W++++A +G EA+ LF T+ +++ C+
Sbjct: 258 EARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCA 317
Query: 185 HCGLKEKGM-EFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
+ +K+ G+ V K T ++D + G L A + M N +
Sbjct: 318 N--IKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVS 375
Query: 244 WKTLLSACKTHKSTDMAG----RIAEEILGVNPQDAAPYVLLSNIHAS 287
W +++ C + +A R+ E+ GV P D +L+ AS
Sbjct: 376 WTAMINGCIQNGDVPLAAALFSRMRED--GVAPNDFTYSTILTASVAS 421
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 120/247 (48%), Gaps = 8/247 (3%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMP-IRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
++L Y K+G L + LM +NV++W +I G QNG ++ MR G
Sbjct: 345 TALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGV 404
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
P+ T+ +++++ +A+L QIHA+V+K V ++L++ YS+ ++++
Sbjct: 405 APNDFTYSTILTA--SVASLPP--QIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALS 460
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC-SHCG 187
F + DVV WS+M+ Y G + A N+F +M + N+ T S++ AC S
Sbjct: 461 IFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTA 520
Query: 188 LKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTL 247
+ G +F + + K+R L + +V + R G + E+A I + + W ++
Sbjct: 521 GVDLGRQFHAISI-KHRCHDALCVSSALVSMYARKGSI-ESAQCIFERQTDRDLVSWNSM 578
Query: 248 LSACKTH 254
LS H
Sbjct: 579 LSGYAQH 585
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 340 bits (873), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 169/444 (38%), Positives = 267/444 (60%), Gaps = 17/444 (3%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
+L + ++L Y+K G + E + + + R+V+AW +I G Q+GL + ++ +
Sbjct: 344 DLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRS 403
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M RP+ T +++S S LA+LG G+QIH VK+G V V ++LI+MY++ G
Sbjct: 404 MVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGS 463
Query: 123 LDDSVKTF--LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
+ + + F + CE D V W+SMI A HG EEA+ LFE M + + +T+V +
Sbjct: 464 ITSASRAFDLIRCE-RDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVF 522
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+H GL +G ++FD+M + P L HY C+VDL GR G L EA I MP++ +
Sbjct: 523 SACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPD 582
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+ W +LLSAC+ +K+ D+ AE +L + P+++ Y L+N++++ +W+ ++ R++
Sbjct: 583 VVTWGSLLSACRVYKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKS 642
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M++ VKKE G SW+E+K++VH F + D HP+ EI + ++++ E+K GYVPDT +
Sbjct: 643 MKDGRVKKEQGFSWIEVKHKVHAFGVEDGIHPQKNEIYITMKKIWDEIKKMGYVPDTASV 702
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA----EHTRGLIVM----------LPFKYISEIKNR 406
+HD++ E KE L+HHSEKLAIAF L +M K+IS++ R
Sbjct: 703 LHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGR 762
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EIIVRD +RFHHF++G CSC DYW
Sbjct: 763 EIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 135/311 (43%), Gaps = 38/311 (12%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN-LM 63
D+ + +++ ++M+ G + M R+++ W ++I+G Q G LD ++ ++
Sbjct: 211 DISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKML 270
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG-- 121
R PD+ T SV+S+C+ L L G+QIH+ +V G + V+++LISMYSRCG
Sbjct: 271 RDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGV 330
Query: 122 ----------------------CLDDSVK---------TFLECEYSDVVLWSSMIAAYGF 150
LD +K F + DVV W++MI Y
Sbjct: 331 ETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQ 390
Query: 151 HGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLE 210
HG EAINLF M +E N T ++L S G + VK +
Sbjct: 391 HGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYS-VS 449
Query: 211 HYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL-- 268
++ + + G + A+ + + + + W +++ A H + A + E +L
Sbjct: 450 VSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLME 509
Query: 269 GVNPQDAAPYV 279
G+ P D YV
Sbjct: 510 GLRP-DHITYV 519
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 103/212 (48%), Gaps = 7/212 (3%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y K G + + +P R+ ++W T+I G G + M G P + T
Sbjct: 90 YAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQFTL 149
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
+V++S + L G+++H+ +VK G +V V +SL++MY++CG + F
Sbjct: 150 TNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVV 209
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
D+ W++MIA + G+ + A+ FEQM +++ VT+ S++ + G + ++
Sbjct: 210 KDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI----VTWNSMISGYNQRGYDLRALDM 265
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDE 227
F M++ P + +T + +L C L++
Sbjct: 266 FSKMLRDSMLSP--DRFT-LASVLSACANLEK 294
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/112 (20%), Positives = 57/112 (50%), Gaps = 4/112 (3%)
Query: 91 GQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGF 150
Q +H V+K+G V ++++L+++YS+ G + K F E W+++++AY
Sbjct: 33 AQLVHCRVIKSGLVFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYAK 92
Query: 151 HGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKK 202
G + + F+++ Q++ V++ +++ + G K + M+++
Sbjct: 93 RGDMDSSCEFFDRLPQRD----SVSWTTMIVGYKNIGQYHKAIRIMGEMMRE 140
>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 990
Score = 340 bits (872), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 167/449 (37%), Positives = 271/449 (60%), Gaps = 24/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G++LDL S + MY+K G + + +P+ + +AW T+I+G +NG E +
Sbjct: 547 GYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVF 606
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ MR++G PD+ T ++ + S L L QG+QIHA +K + D V +SL+ MY++C
Sbjct: 607 SQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKC 666
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +DD+ F E ++ W++M+ HG+G+E + LF+QM+ + + VTF+ +L
Sbjct: 667 GSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVL 726
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL + + M Y KP +EHY+C+ D LGR G + +A LI +M ++A+
Sbjct: 727 SACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEAS 786
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A +++TLL+AC+ T+ R+A ++L + P D++ YVLLSN++A+A +W + R
Sbjct: 787 ASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTM 846
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+ VKK+PG SW+E+KN++H F + D+S+ ++ I ++++ ++K GYVP+T
Sbjct: 847 MKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFT 906
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
+ D++ EEKE L +HSEKLA+AF GL+ P KYI+
Sbjct: 907 LVDVEEEEKERALYYHSEKLAVAF-----GLLSTPPSTPIRVIKNLRVCGDCHNAMKYIA 961
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
++ NREI++RDA+RFH F++G CSCGDYW
Sbjct: 962 KVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 131/277 (47%), Gaps = 6/277 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +L L +SL +MY K V M R++I+W ++IAG AQNGL + + +
Sbjct: 345 GLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLF 404
Query: 61 NLMRMVGFRPDKITFVSVISSCSELAT-LGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ G +PD+ T SV+ + S L L +Q+H +K D V ++LI YSR
Sbjct: 405 MQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSR 464
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
C+ ++ + E D+V W++M+A Y G + + LF M ++ ++D T ++
Sbjct: 465 NRCMKEA-EILFERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATV 523
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
C +G + +K L + ++D+ +CG + A ++PV
Sbjct: 524 FKTCGFLFAINQGKQVHAYAIKS-GYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPV-P 581
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEE--ILGVNPQD 274
+ + W T++S C + + A + + ++GV P +
Sbjct: 582 DDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDE 618
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 124/277 (44%), Gaps = 6/277 (2%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
+++AW ++AG Q+ L + LM G R D T +V +C L + QG+Q+H
Sbjct: 481 DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVH 540
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGE 155
A +K+G LD+ V S ++ MY +CG + + F D V W++MI+ +G+ E
Sbjct: 541 AYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEE 600
Query: 156 EAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVK-KYRRKPRLEHYTC 214
A ++F QM ++ T +L A S E+G + +K P + T
Sbjct: 601 RAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVG--TS 658
Query: 215 VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNP 272
+VD+ +CG +D+A L + + + N W +L H ++ +++ LG+ P
Sbjct: 659 LVDMYAKCGSIDDAYCLFKRIEM-MNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKP 717
Query: 273 QDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKE 309
+LS S + R + +K E
Sbjct: 718 DKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPE 754
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 84/174 (48%), Gaps = 9/174 (5%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNG--LAEDVLDQYNLMRMVG 67
++L MY K GSL +V MP R++++W +++A AQ+ + E++ + L R++
Sbjct: 78 NNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRIL- 136
Query: 68 FRPD-----KITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
R D ++T ++ C + + H K G D V +L+++Y + G
Sbjct: 137 -RQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGK 195
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
+ + F E Y DVVLW+ M+ AY G EEAI+L N++T
Sbjct: 196 VKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITL 249
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 62/114 (54%)
Query: 71 DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTF 130
D++TF+ ++++ ++ +L GQQ+H +K G L + V +SLI+MY + + F
Sbjct: 314 DQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVF 373
Query: 131 LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D++ W+S+IA +G EA+ LF Q+ + + + T S+L A S
Sbjct: 374 DNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAAS 427
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 77/169 (45%), Gaps = 15/169 (8%)
Query: 91 GQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGF 150
G+ HA ++ + + +I++LISMYS+CG L + + F + D+V W+S++AAY
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117
Query: 151 HGKG-----EEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRR 205
+ ++A LF + Q + +T +L C H G F Y
Sbjct: 118 SSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESF-----HGYAC 172
Query: 206 KPRLEHYTCV----VDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
K L+ V V++ + G + E L MP + + ++W +L A
Sbjct: 173 KIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYR-DVVLWNLMLKA 220
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 75/180 (41%), Gaps = 32/180 (17%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + D +L ++Y+K G + EG+ + MP R+V+ W ++ + G E+ +D
Sbjct: 175 GLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLS 234
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ G P++IT ++ A + +G D G + S +
Sbjct: 235 SAFHSSGLNPNEITL-----------------RLLARI--SGDDSDAGQVKSFAN----- 270
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G SV S+++ + ++ Y G+ + F M + + E + VTF+ +L
Sbjct: 271 GNDASSV--------SEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILML 322
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 340 bits (872), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 167/440 (37%), Positives = 259/440 (58%), Gaps = 24/440 (5%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L MY K G + + ++ M R+V+AW +I+G Q + L ++ M++
Sbjct: 260 TALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVE 319
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P+ +T VSV+S+C+ L L G+ +H+ V + SL + ++L+ Y++CGC+DD+V+
Sbjct: 320 PNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEA 379
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F + W+++I +G+G EA+ LF M + E DVTF+ +L ACSH L
Sbjct: 380 FESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLV 439
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
E+G FD M + Y KPR+EHY C+VDLLGR G +DEA IR MP++ NA+IW+ LLS
Sbjct: 440 EEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLS 499
Query: 250 ACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKE 309
+C H++ + ++I+ +NP + YVLLSNI+ASA +W+ + R+ M++R ++K
Sbjct: 500 SCAVHRNVGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQWKDAAMVRKEMKDRGIEKT 559
Query: 310 PGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEK 369
PG S +E+ V +F D HP EI +EE+ +K+ GYVP+T +++ EK
Sbjct: 560 PGCSLIELDGVVFEFFAEDSDHPELREIYQKVEEMIGRIKVAGYVPNTADVRLEVEEREK 619
Query: 370 EYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREIIV 410
E ++ HHSEKLAIAF GL+ + P K IS++ +REI+V
Sbjct: 620 EVSVSHHSEKLAIAF-----GLMKLDPGATIRLSKNLRVCADCHSATKLISKVYDREIVV 674
Query: 411 RDASRFHHFRNGKCSCGDYW 430
RD + FHHF++G CSC DYW
Sbjct: 675 RDRNIFHHFKDGTCSCNDYW 694
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 148/317 (46%), Gaps = 20/317 (6%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D SSL HMY G + V V+ W ++A +NG +V++ +
Sbjct: 150 GLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEVVEMF 209
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M VG D++T VSV+++C + G+ + V + G + + ++++L+ MY++C
Sbjct: 210 KGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKC 269
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + + F + DVV WS+MI+ Y + EA+ LF +M+ E NDVT VS+L
Sbjct: 270 GEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVL 329
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY----TCVVDLLGRCGYLDEAAALIRNMP 236
AC+ G E G V Y R+ RL T +VD +CG +D+A +MP
Sbjct: 330 SACAVLGALETGK-----WVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMP 384
Query: 237 VKANAIIWKTLLSACKTHKSTDMAGRIAEEIL------GVNPQDAAPYVLLSNIHASAKR 290
VK N+ W L+ +T+ GR A E+ G+ P D +L S
Sbjct: 385 VK-NSWTWTALIKG----MATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLV 439
Query: 291 WQGVSEFREAMRERNVK 307
+G F R+ +K
Sbjct: 440 EEGRRHFDSMARDYGIK 456
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 107/215 (49%), Gaps = 6/215 (2%)
Query: 71 DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTF 130
D+ T + SCS + L G+ + A VK G D V+SSLI MY+ CG + + F
Sbjct: 119 DQHTAACALKSCSRMCALDVGRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVF 178
Query: 131 LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKE 190
E S VV+W++++AAY +G E + +F+ M + ++VT VS++ AC G +
Sbjct: 179 DAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAK 238
Query: 191 KGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
G + ++ R P+L T ++D+ +CG + +A L M + + + W ++S
Sbjct: 239 LGKWVAGHVDEEGLARNPKL--VTALMDMYAKCGEIGKARRLFDGMQSR-DVVAWSAMIS 295
Query: 250 A-CKTHKSTDMAGRIAE-EILGVNPQDAAPYVLLS 282
+ + + G +E ++ V P D +LS
Sbjct: 296 GYTQADQCREALGLFSEMQLARVEPNDVTMVSVLS 330
>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
Length = 624
Score = 340 bits (872), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 170/440 (38%), Positives = 259/440 (58%), Gaps = 15/440 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ GS+L MY + G + V + +N ++W LI+G A+ G E L + M+
Sbjct: 186 DVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMVFAEMQ 245
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
GF T+ S+ S + + L QG+ +HA +VK+ L V ++++ MY++ G +
Sbjct: 246 RNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVGNTMLDMYAKSGSMI 305
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D+ K F D+V W+SM+ A+ +G G+EA++ FE+M + N +TF+ +L ACS
Sbjct: 306 DARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQITFLCILTACS 365
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL ++G +FD M+K+Y +P +EHY VVDLLGR G L+ A I MP++ A +W
Sbjct: 366 HGGLVKEGKHYFD-MIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVW 424
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
LL+AC+ HK+ + A+ + ++P D+ P VLL NI+AS W + R+ M+
Sbjct: 425 GALLAACRMHKNAKVGQFAADHVFQLDPDDSGPPVLLYNIYASTGHWDAAARVRKMMKAT 484
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
VKKEP SW+EI N VH F D +HPR+ EI +E++ +++ GYVPD + +
Sbjct: 485 GVKKEPACSWVEIGNSVHMFVANDDTHPRAEEIYKMWDEISMKIRKEGYVPDMDYVLLHV 544
Query: 365 DSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNREIIV 410
D +E+E NL++HSEK+A+AFA + G + + FKYIS++ REI+V
Sbjct: 545 DEQEREANLQYHSEKIALAFALIQMPAGATIRIMKNIRICGDCHSAFKYISKVFEREIVV 604
Query: 411 RDASRFHHFRNGKCSCGDYW 430
RD +RFHHF NG CSCGDYW
Sbjct: 605 RDTNRFHHFSNGSCSCGDYW 624
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 132/249 (53%), Gaps = 2/249 (0%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
FE D +SL H+Y K GS+VE KV M +++++W +LIAG AQN + + +
Sbjct: 82 FEGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLP 141
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M F+P+ TF S++ + A G G QIHA VK DV V S+L+ MY+RCG
Sbjct: 142 GMLKGRFKPNGFTFASLLKAAGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCG 201
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+D + F + + + V W+++I+ + G GE A+ +F +M++ FEA T+ S+
Sbjct: 202 KMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFS 261
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
+ G E+G MVK R+K ++D+ + G + +A + + + +
Sbjct: 262 GLAGIGALEQGKWVHAHMVKS-RQKLTAFVGNTMLDMYAKSGSMIDARKVFERV-LNKDL 319
Query: 242 IIWKTLLSA 250
+ W ++L+A
Sbjct: 320 VTWNSMLTA 328
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 4/182 (2%)
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P + + I++C++ L ++IH + + D + +SLI +Y +CG + ++ K
Sbjct: 49 PTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKV 108
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F + D+V W+S+IA Y + EAI L M + F+ N TF SLL A
Sbjct: 109 FDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADS 168
Query: 190 EKGMEFFDLMVK-KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
G + L VK + + + ++D+ RCG +D A A+ + K N + W L+
Sbjct: 169 GIGGQIHALAVKCDWHEDVYVG--SALLDMYARCGKMDMATAVFDKLDSK-NGVSWNALI 225
Query: 249 SA 250
S
Sbjct: 226 SG 227
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 76/150 (50%), Gaps = 1/150 (0%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
+L G+++ MY KSGS+++ KV + ++++ W +++ AQ GL ++ + +
Sbjct: 285 KLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEE 344
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
MR G ++ITF+ ++++CS + +G+ + + ++ +++ + R G
Sbjct: 345 MRKSGIYLNQITFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVDLLGRAGL 404
Query: 123 LDDS-VKTFLECEYSDVVLWSSMIAAYGFH 151
L+ + V F +W +++AA H
Sbjct: 405 LNYALVFIFKMPMEPTAAVWGALLAACRMH 434
>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 340 bits (872), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 178/445 (40%), Positives = 260/445 (58%), Gaps = 15/445 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRL-MPIRNVIAWITLIAGKAQNGLAEDVLDQ 59
GFE D+ G++L MY K+G + V + RNV+++ LI G + E L
Sbjct: 172 GFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSV 231
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ +R G P++ TF S+I +C+ A L QG Q+HA+V+K D V S L+ MY +
Sbjct: 232 FVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGK 291
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG L+ +++ F E + W+S+++ +G HG G++AI +FE+M + + N +TF+SL
Sbjct: 292 CGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISL 351
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L CSH GL E+G+++F M K Y P EHY+CV+DLLGR G L EA I MP +
Sbjct: 352 LTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEP 411
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
NA W + L AC+ H +M AE+++ + P+++ VLLSNI+A+ ++W+ V R
Sbjct: 412 NAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRM 471
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
MR+ NVKK PG SW+++ + H F D SHPR I L+ L ++K GYVP T +
Sbjct: 472 RMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAGYVPRTDS 531
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFAEHT----------RGLIVML----PFKYISEIKN 405
DMD KE L HSE++A+AFA + + L V + K+IS++
Sbjct: 532 VPLDMDDSMKEKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTG 591
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
R+IIVRD SRFHHF +G CSCGDYW
Sbjct: 592 RKIIVRDNSRFHHFTDGSCSCGDYW 616
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 147/301 (48%), Gaps = 7/301 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +L GS+L MY K G++ + KV MP ++ ++W +I G ++ G E+ L +
Sbjct: 71 GIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAF 130
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M D+ S + +C L G+ +H+ VVK G D+ V ++L MYS+
Sbjct: 131 KKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKA 190
Query: 121 GCLDDSVKTF-LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G ++ + F ++ E +VV ++ +I Y + E+ +++F ++ ++ E N+ TF SL
Sbjct: 191 GDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSL 250
Query: 180 LYACSHCGLKEKGMEFFDLMVK-KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+ AC++ E+G + ++K + P + + +VD+ G+CG L++A +
Sbjct: 251 IKACANQAALEQGTQLHAQVMKINFDEDPFVS--SILVDMYGKCGLLEQAIQAFDEIG-D 307
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSE 296
I W +L+S H A +I E ++ GV P LL+ + +G+
Sbjct: 308 PTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDY 367
Query: 297 F 297
F
Sbjct: 368 F 368
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 130/282 (46%), Gaps = 35/282 (12%)
Query: 32 MPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQG 91
MP RN+++W +I+G +QN + + + MR+ G P + F S I +C+ L ++ G
Sbjct: 1 MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60
Query: 92 QQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFH 151
+Q+H +K G ++ V S+L MYS+CG + D+ K F E D V W++MI Y
Sbjct: 61 KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 120
Query: 152 GKGEEAINLFEQMEQKEFEANDVTFVSLLYACS-----------HCGLKEKGME----FF 196
G+ EEA+ F++M +E + S L AC H + + G E
Sbjct: 121 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG 180
Query: 197 DLMVKKYRRKPRLE----------------HYTCVVDLLGRCGYLDEAAAL---IRNMPV 237
+ + Y + +E YTC++D +++ ++ +R +
Sbjct: 181 NALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGI 240
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYV 279
+ N + +L+ AC + + ++ +++ +N D P+V
Sbjct: 241 EPNEFTFSSLIKACANQAALEQGTQLHAQVMKIN-FDEDPFV 281
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 340 bits (872), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 170/436 (38%), Positives = 266/436 (61%), Gaps = 15/436 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G++ + GS+L MY + G + + MP ++ ++W LI+G A+ G E L
Sbjct: 219 GYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLL 278
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ F+P T+ SV+S+C+ + L QG+ +HA ++K+G L + ++L+ MY++
Sbjct: 279 WKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKA 338
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +DD+ + F DVV W++M+ HG G+E ++ FEQM + E N+++F+ +L
Sbjct: 339 GSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVL 398
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL ++G+ +F+LM KKY+ +P + HY VDLLGR G LD A IR MP++
Sbjct: 399 TACSHSGLLDEGLYYFELM-KKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPT 457
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A +W LL AC+ HK+ ++ AE ++P D+ P +LLSNI+ASA RW+ V++ R+
Sbjct: 458 AAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKM 517
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+E VKK+P SW+EI+N VH F D++HPR EI EE++ ++K GYVPDT
Sbjct: 518 MKESGVKKQPACSWVEIENAVHLFVANDETHPRIKEIRGKWEEISGKIKEIGYVPDTSHV 577
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNR 406
+ +D +E+E L++HSEKLA+AFA G + + K++S++ +R
Sbjct: 578 LLFVDQQEREEKLQYHSEKLALAFALLNTPTGSPIRIKKNIRVCGDCHAAIKFVSKVVDR 637
Query: 407 EIIVRDASRFHHFRNG 422
EIIVRD +RFH FR+G
Sbjct: 638 EIIVRDTNRFHRFRDG 653
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 155/309 (50%), Gaps = 7/309 (2%)
Query: 6 LVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRM 65
LV + + +MY K G L + ++ MP ++++ W LIAG +QN D L + M
Sbjct: 123 LVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLR 182
Query: 66 VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD 125
+GF+P+ T S++ + L G Q+HA +K G V V S+L+ MY+RCG +D
Sbjct: 183 LGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDA 242
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
+ F V W+++I+ + G+GE A++L +M++K F+ T+ S+L AC+
Sbjct: 243 AQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACAS 302
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
G E+G M+K + T ++D+ + G +D+A + + VK + + W
Sbjct: 303 IGALEQGKWVHAHMIKSGLKLIAFIGNT-LLDMYAKAGSIDDAKRVFDRL-VKPDVVSWN 360
Query: 246 TLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
T+L+ C H E++L G+ P + + +L+ S +G+ F E M++
Sbjct: 361 TMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYF-ELMKK 419
Query: 304 RNVKKEPGV 312
V EP V
Sbjct: 420 YKV--EPDV 426
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 103/192 (53%), Gaps = 5/192 (2%)
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLI-SMYSR 119
+L++ PD + ++ C+ L + QG+ +HA +V + + V+ ++I +MY++
Sbjct: 76 DLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAK 135
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CGCLDD+ + F E D+V W+++IA + + + +A+ LF QM + F+ N T SL
Sbjct: 136 CGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSL 195
Query: 180 LYAC-SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
L A S GL + G + + KY + + + +VD+ RCG++D A MP K
Sbjct: 196 LKASGSEHGL-DPGTQLHAFCL-KYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTK 253
Query: 239 ANAIIWKTLLSA 250
+ + W L+S
Sbjct: 254 SE-VSWNALISG 264
>gi|225464414|ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Vitis vinifera]
Length = 594
Score = 340 bits (872), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 174/446 (39%), Positives = 273/446 (61%), Gaps = 26/446 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
++ G++L +Y K G + + V MP R+ + W +++AG QN L E+ L ++ +
Sbjct: 155 NVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQ 214
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+G ++ T S +S+C+ A L +G+Q+ A K G ++ VISSLI MY++CG ++
Sbjct: 215 AMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIE 274
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
++ F E +VVLW+++++ + H + EA+ FE+M+Q ND+T++S+L ACS
Sbjct: 275 EAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACS 334
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL EKG ++FDLM++ + P + HY+C+VD+LGR G L EA I MP A A +W
Sbjct: 335 HLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMW 394
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
+LL++C+ +++ ++A A+ + + P +A +VLLSNI+A+ RW+ V+ R ++E
Sbjct: 395 GSLLASCRIYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYAANDRWEEVARARNLLKES 454
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
KKE G SW+EIK++VH F +G+++HPR +EI L LE+L EMK GY T D+HD+
Sbjct: 455 KAKKERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKTEHDLHDV 514
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP--------------------FKYISEIK 404
+ K+ L+HHSEKLA+ F I++LP K S I
Sbjct: 515 EESRKQELLRHHSEKLALTFG------IMVLPHGAPIRIMKNLRICGDCHSFMKLASSIT 568
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
REIIVRD +RFHHF+NG CSCG++W
Sbjct: 569 EREIIVRDTNRFHHFKNGYCSCGEFW 594
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 140/286 (48%), Gaps = 8/286 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D + + L +MY K G + K+ MP+R++++W T++ QNG E L +
Sbjct: 50 GLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLF 109
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G + T SV+ +C+ + + +Q+H +K +V V ++L+ +Y++C
Sbjct: 110 MQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKC 169
Query: 121 GCLDDSVKTFLEC--EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
G + D+ F EC E SDV WSSM+A Y + EEA+ LF + + E N T S
Sbjct: 170 GLVKDANLVF-ECMPERSDVT-WSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISS 227
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
L AC+ +G + + K + + ++D+ +CG ++EA + ++ K
Sbjct: 228 ALSACAARAALIEGKQVQAVSCKT-GIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEK 286
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLS 282
N ++W +LS H + A E++ +G+ P D +LS
Sbjct: 287 -NVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLS 331
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 88/163 (53%), Gaps = 6/163 (3%)
Query: 90 QGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYG 149
+G HA++++ G D + L++MYS+CG ++ + K F E +V W++M+ ++
Sbjct: 38 EGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHT 97
Query: 150 FHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH--CGLKEKGMEFFDLMVKKYRRKP 207
+G E+A+ LF QM+++ ++ T S++ AC+ C + K + F L K
Sbjct: 98 QNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFAL---KTALDS 154
Query: 208 RLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+ T ++D+ +CG + +A + MP +++ + W ++++
Sbjct: 155 NVFVGTALLDVYAKCGLVKDANLVFECMPERSD-VTWSSMVAG 196
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 340 bits (871), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 168/442 (38%), Positives = 266/442 (60%), Gaps = 15/442 (3%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
D+ ++L MY K GS+ E E V M ++++I+W T+I G ++N A + L +NL+
Sbjct: 430 FDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLL 489
Query: 64 RMVG-FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
+ F PD+ T V+ +C+ L+ +G++IH +++ G D V +SL+ MY++CG
Sbjct: 490 LVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGA 549
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
L + F + D+V W+ MIA YG HG G+EAI LF QM Q E ++++FVSLLYA
Sbjct: 550 LLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYA 609
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
CSH GL ++G FF++M + + +P +EHY C+VD+L R G L +A I NMP+ +A
Sbjct: 610 CSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIPPDAT 669
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMR 302
IW LL C+ H +A R+AE++ + P++ YVL++NI+A A++W+ V R+ +
Sbjct: 670 IWGALLCGCRIHHDVKLAERVAEKVFELEPENTGYYVLMANIYAEAEKWEEVKRLRKRIG 729
Query: 303 ERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMH 362
+R ++K PG SW+EIK +V+ F GD S+P + +I+ +L + + M GY P T +
Sbjct: 730 QRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETEKIEAFLRGVRARMIEEGYSPLTKYALI 789
Query: 363 DMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVMLP------------FKYISEIKNREI 408
D + EKE L HSEKLA+A G I+ + K++S++ REI
Sbjct: 790 DAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREI 849
Query: 409 IVRDASRFHHFRNGKCSCGDYW 430
++RD++RFH F++G CSC +W
Sbjct: 850 VLRDSNRFHQFKDGHCSCRGFW 871
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 124/250 (49%), Gaps = 2/250 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF G+SL Y+K+ + KV M R+VI+W ++I G NGLAE L +
Sbjct: 225 GFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVF 284
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G D T VSV + C++ + G+ +H VKA S + ++L+ MYS+C
Sbjct: 285 VQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKC 344
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G LD + F E VV ++SMIA Y G EA+ LFE+ME++ + T ++L
Sbjct: 345 GDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVL 404
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
C+ L ++G + +K+ + ++D+ +CG + EA + M VK +
Sbjct: 405 NCCARNRLLDEGKRVHE-WIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVK-D 462
Query: 241 AIIWKTLLSA 250
I W T++
Sbjct: 463 IISWNTVIGG 472
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 125/246 (50%), Gaps = 3/246 (1%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L MY K G L + V R M R+V+++ ++IAG A+ GLA + + + M G
Sbjct: 335 NTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 394
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
PD T +V++ C+ L +G+++H + + D+ V ++L+ MY++CG + ++
Sbjct: 395 PDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELV 454
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFE-QMEQKEFEANDVTFVSLLYACSHCGL 188
F E D++ W+++I Y + EA++LF + +K F ++ T +L AC+
Sbjct: 455 FSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSA 514
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
+KG E +++ R +VD+ +CG L A L ++ K + + W ++
Sbjct: 515 FDKGREIHGYIMRNGYFSDR-HVANSLVDMYAKCGALLLARLLFDDITSK-DLVSWTVMI 572
Query: 249 SACKTH 254
+ H
Sbjct: 573 AGYGMH 578
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 112/240 (46%), Gaps = 3/240 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF LD GS LA MY G L E +V + I + W L+ A++G + +
Sbjct: 124 GFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGLF 183
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G D TF V S S L ++ G+Q+H ++K+G V +SL++ Y +
Sbjct: 184 KKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKN 243
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
+D + K F E DV+ W+S+I Y +G E+ +++F QM E + T VS+
Sbjct: 244 HRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVF 303
Query: 181 YACSHCGLKEKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
C+ L G VK + R+ R ++D+ +CG LD A + R M ++
Sbjct: 304 AGCADSRLISLGRAVHCFGVKACFSREDRF--CNTLLDMYSKCGDLDSAKVVFREMSGRS 361
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 87/174 (50%), Gaps = 10/174 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ D +SL MY K G+L+ + + +++++W +IAG +G ++ + +
Sbjct: 529 GYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALF 588
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV--ISSLISMYS 118
N MR G PD+I+FVS++ +CS + +G + +++ ++ V + ++ M +
Sbjct: 589 NQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFF-NIMRHECKIEPTVEHYACIVDMLA 647
Query: 119 RCGCLDDSVKTFLECE--YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFE 170
R G L + + F+E D +W +++ H + L E++ +K FE
Sbjct: 648 RTGNLSKAYR-FIENMPIPPDATIWGALLCGCRIH----HDVKLAERVAEKVFE 696
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 50/106 (47%)
Query: 71 DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTF 130
D T SV+ C++ +L G+++ + G LD + S L MY+ CG L ++ + F
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVF 152
Query: 131 LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
+ + + W+ ++ G +I LF++M E + TF
Sbjct: 153 DQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 340 bits (871), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 168/442 (38%), Positives = 266/442 (60%), Gaps = 15/442 (3%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
D+ ++L MY K GS+ E E V M ++++I+W T+I G ++N A + L +NL+
Sbjct: 430 FDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLL 489
Query: 64 -RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
F PD+ T V+ +C+ L+ +G++IH +++ G D V +SL+ MY++CG
Sbjct: 490 LEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGA 549
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
L + F + D+V W+ MIA YG HG G+EAI LF QM Q EA++++FVSLLYA
Sbjct: 550 LLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYA 609
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
CSH GL ++G FF++M + + +P +EHY C+VD+L R G L +A I NMP+ +A
Sbjct: 610 CSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDAT 669
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMR 302
IW LL C+ H +A ++AE++ + P++ YVL++NI+A A++W+ V R+ +
Sbjct: 670 IWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIG 729
Query: 303 ERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMH 362
+R ++K PG SW+EIK +V+ F GD S+P + I+ +L ++ + M GY P T +
Sbjct: 730 QRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALI 789
Query: 363 DMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVMLP------------FKYISEIKNREI 408
D + EKE L HSEKLA+A G I+ + K++S++ REI
Sbjct: 790 DAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREI 849
Query: 409 IVRDASRFHHFRNGKCSCGDYW 430
++RD++RFH F++G CSC +W
Sbjct: 850 VLRDSNRFHQFKDGHCSCRGFW 871
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 134/270 (49%), Gaps = 6/270 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF G+SL Y+K+ + KV M R+VI+W ++I G NGLAE L +
Sbjct: 225 GFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVF 284
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M + G D T VSV + C++ + G+ +H+ VKA S + ++L+ MYS+C
Sbjct: 285 VQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKC 344
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G LD + F E VV ++SMIA Y G EA+ LFE+ME++ + T ++L
Sbjct: 345 GDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVL 404
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
C+ L ++G + +K+ + ++D+ +CG + EA + M VK +
Sbjct: 405 NCCARYRLLDEGKRVHE-WIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK-D 462
Query: 241 AIIWKTLLSA----CKTHKSTDMAGRIAEE 266
I W T++ C +++ + + EE
Sbjct: 463 IISWNTIIGGYSKNCYANEALSLFNLLLEE 492
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 126/246 (51%), Gaps = 3/246 (1%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L MY K G L + V R M R+V+++ ++IAG A+ GLA + + + M G
Sbjct: 335 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 394
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
PD T +V++ C+ L +G+++H + + D+ V ++L+ MY++CG + ++
Sbjct: 395 PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELV 454
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFE-QMEQKEFEANDVTFVSLLYACSHCGL 188
F E D++ W+++I Y + EA++LF +E+K F ++ T +L AC+
Sbjct: 455 FSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSA 514
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
+KG E +++ R +VD+ +CG L A L ++ K + + W ++
Sbjct: 515 FDKGREIHGYIMRNGYFSDR-HVANSLVDMYAKCGALLLAHMLFDDIASK-DLVSWTVMI 572
Query: 249 SACKTH 254
+ H
Sbjct: 573 AGYGMH 578
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 114/240 (47%), Gaps = 3/240 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF +D GS L+ MY G L E +V + I + W L+ A++G + +
Sbjct: 124 GFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLF 183
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G D TF V S S L ++ G+Q+H ++K+G V +SL++ Y +
Sbjct: 184 KKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKN 243
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
+D + K F E DV+ W+S+I Y +G E+ +++F QM E + T VS+
Sbjct: 244 QRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVF 303
Query: 181 YACSHCGLKEKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
C+ L G + VK + R+ R ++D+ +CG LD A A+ R M ++
Sbjct: 304 AGCADSRLISLGRAVHSIGVKACFSREDRF--CNTLLDMYSKCGDLDSAKAVFREMSDRS 361
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 85/176 (48%), Gaps = 14/176 (7%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ D +SL MY K G+L+ + + +++++W +IAG +G ++ + +
Sbjct: 529 GYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALF 588
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV--ISSLISMYS 118
N MR G D+I+FVS++ +CS + +G + +++ ++ V + ++ M +
Sbjct: 589 NQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFF-NIMRHECKIEPTVEHYACIVDMLA 647
Query: 119 RCGCLDDSVKTFLECEY----SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFE 170
R G D +K + E D +W +++ H + L E++ +K FE
Sbjct: 648 RTG---DLIKAYRFIENMPIPPDATIWGALLCGCRIH----HDVKLAEKVAEKVFE 696
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 50/106 (47%)
Query: 71 DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTF 130
D T SV+ C++ +L G+++ + G +D + S L MY+ CG L ++ + F
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 131 LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
E + + W+ ++ G +I LF++M E + TF
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198
>gi|357462829|ref|XP_003601696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490744|gb|AES71947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 340 bits (871), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 181/449 (40%), Positives = 259/449 (57%), Gaps = 25/449 (5%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
FEL ++ +++ Y +SG +E ++ R P +N+ AW LI+G Q+G A D L +
Sbjct: 173 FELSSISWTAMISGYARSGRKLEALELFRESPFKNLYAWTALISGLVQSGNANDALYLFV 232
Query: 62 LMRMVGFR-PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
MR G D + SV+ +C+ A G+Q+H V+ G + + ++L+ MY++C
Sbjct: 233 EMRREGVSIADPLVLSSVVGACANSAVRELGKQVHCVVITLGYESCLFISNALVDMYAKC 292
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
+ + F E DVV W+S+I HG EEA+ L++ M + N+VTFV L+
Sbjct: 293 SDVVAAKYIFCEMRRKDVVSWTSIIVGTAQHGLAEEALTLYDDMVLAGVKPNEVTFVGLI 352
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
YACSH GL KG F MV+ + +P L+HYTC++DL R G+LDEA LIR MPVK +
Sbjct: 353 YACSHVGLVSKGRALFKSMVEDFGIRPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVKPD 412
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
W LLSACK H +T MA RIA+ +L + P+D + Y+LLSNI+A A W+ VS R+
Sbjct: 413 EPTWAALLSACKHHGNTKMAVRIADHLLDLKPEDPSSYILLSNIYAGAGMWENVSMVRKL 472
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M + VKK PG S +++ + F G+ S P EI + +L SEM+ RGYVPDT +
Sbjct: 473 MAVKEVKKVPGYSCVDLGREFQVFHAGEASQPMKDEILGLMTKLDSEMRRRGYVPDTSSV 532
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
+ DMD +EKE L HSE+LA+A+ GL+ +P K IS
Sbjct: 533 LLDMDQQEKERQLFWHSERLALAY-----GLLKAVPGTTIRIVKNLRVCGDCHTVLKLIS 587
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
I +REI VRD R+HHF++GKCSC D+W
Sbjct: 588 AITSREIYVRDVKRYHHFKDGKCSCNDFW 616
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 117/224 (52%), Gaps = 19/224 (8%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+E L ++L MY K +V + + M ++V++W ++I G AQ+GLAE+ L Y
Sbjct: 274 GYESCLFISNALVDMYAKCSDVVAAKYIFCEMRRKDVVSWTSIIVGTAQHGLAEEALTLY 333
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISS------LI 114
+ M + G +P+++TFV +I +CS + + +G+ + +V+ D G+ S L+
Sbjct: 334 DDMVLAGVKPNEVTFVGLIYACSHVGLVSKGRALFKSMVE-----DFGIRPSLQHYTCLL 388
Query: 115 SMYSRCGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQ-MEQKEFEAN 172
++SR G LD++ D W+++++A HG + A+ + + ++ K + +
Sbjct: 389 DLFSRSGHLDEAENLIRTMPVKPDEPTWAALLSACKHHGNTKMAVRIADHLLDLKPEDPS 448
Query: 173 DVTFVSLLYACSHCGLKEKGMEFFDLM-VKKYRRKPRLEHYTCV 215
+S +YA + G+ E LM VK+ ++ P Y+CV
Sbjct: 449 SYILLSNIYAGA--GMWENVSMVRKLMAVKEVKKVPG---YSCV 487
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 127/306 (41%), Gaps = 50/306 (16%)
Query: 11 SLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRP 70
+L Y K G L + K+ +P ++ +AW T+++ + L + G +P
Sbjct: 48 TLIDAYGKCGLLKDALKLFDALPQQDHVAWATVLSACNLSNLPHKAFSISLPILHEGLQP 107
Query: 71 DKITFVSVISSCSELAT--LGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
D F S+I +C+ L + + G+Q+HA + + D V SSL+ MY++ D
Sbjct: 108 DHFVFSSLIKACANLGSVHVKLGKQLHARFLLSPFFEDDVVKSSLVDMYAKFELPDYGRA 167
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEF--------------EANDV 174
F + W++MI+ Y G+ EA+ LF + K AND
Sbjct: 168 VFDSIFELSSISWTAMISGYARSGRKLEALELFRESPFKNLYAWTALISGLVQSGNANDA 227
Query: 175 TFV------------------SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC-- 214
++ S++ AC++ ++E G + +++ L + +C
Sbjct: 228 LYLFVEMRREGVSIADPLVLSSVVGACANSAVRELGKQVHCVVIT-------LGYESCLF 280
Query: 215 ----VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL-- 268
+VD+ +C + A + M K + + W +++ H + A + ++++
Sbjct: 281 ISNALVDMYAKCSDVVAAKYIFCEMRRK-DVVSWTSIIVGTAQHGLAEEALTLYDDMVLA 339
Query: 269 GVNPQD 274
GV P +
Sbjct: 340 GVKPNE 345
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 77 SVISSCSELATLGQ-----GQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFL 131
+V++ S+L +LG+ +++HA+++K+G + +LI Y +CG L D++K F
Sbjct: 8 TVLALKSQLFSLGRKNPFIAKKLHAQIIKSGLNHHHPFPKTLIDAYGKCGLLKDALKLFD 67
Query: 132 ECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCG 187
D V W+++++A +A ++ + + + + F SL+ AC++ G
Sbjct: 68 ALPQQDHVAWATVLSACNLSNLPHKAFSISLPILHEGLQPDHFVFSSLIKACANLG 123
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 168/442 (38%), Positives = 266/442 (60%), Gaps = 15/442 (3%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
D+ ++L MY K GS+ E E V M ++++I+W T+I G ++N A + L +NL+
Sbjct: 279 FDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLL 338
Query: 64 -RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
F PD+ T V+ +C+ L+ +G++IH +++ G D V +SL+ MY++CG
Sbjct: 339 LEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGA 398
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
L + F + D+V W+ MIA YG HG G+EAI LF QM Q EA++++FVSLLYA
Sbjct: 399 LLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYA 458
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
CSH GL ++G FF++M + + +P +EHY C+VD+L R G L +A I NMP+ +A
Sbjct: 459 CSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDAT 518
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMR 302
IW LL C+ H +A ++AE++ + P++ YVL++NI+A A++W+ V R+ +
Sbjct: 519 IWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIG 578
Query: 303 ERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMH 362
+R ++K PG SW+EIK +V+ F GD S+P + I+ +L ++ + M GY P T +
Sbjct: 579 QRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALI 638
Query: 363 DMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVMLP------------FKYISEIKNREI 408
D + EKE L HSEKLA+A G I+ + K++S++ REI
Sbjct: 639 DAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREI 698
Query: 409 IVRDASRFHHFRNGKCSCGDYW 430
++RD++RFH F++G CSC +W
Sbjct: 699 VLRDSNRFHQFKDGHCSCRGFW 720
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 134/270 (49%), Gaps = 6/270 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF G+SL Y+K+ + KV M R+VI+W ++I G NGLAE L +
Sbjct: 74 GFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVF 133
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M + G D T VSV + C++ + G+ +H+ VKA S + ++L+ MYS+C
Sbjct: 134 VQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKC 193
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G LD + F E VV ++SMIA Y G EA+ LFE+ME++ + T ++L
Sbjct: 194 GDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVL 253
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
C+ L ++G + +K+ + ++D+ +CG + EA + M VK +
Sbjct: 254 NCCARYRLLDEGKRVHE-WIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK-D 311
Query: 241 AIIWKTLLSA----CKTHKSTDMAGRIAEE 266
I W T++ C +++ + + EE
Sbjct: 312 IISWNTIIGGYSKNCYANEALSLFNLLLEE 341
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 126/246 (51%), Gaps = 3/246 (1%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L MY K G L + V R M R+V+++ ++IAG A+ GLA + + + M G
Sbjct: 184 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 243
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
PD T +V++ C+ L +G+++H + + D+ V ++L+ MY++CG + ++
Sbjct: 244 PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELV 303
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFE-QMEQKEFEANDVTFVSLLYACSHCGL 188
F E D++ W+++I Y + EA++LF +E+K F ++ T +L AC+
Sbjct: 304 FSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSA 363
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
+KG E +++ R +VD+ +CG L A L ++ K + + W ++
Sbjct: 364 FDKGREIHGYIMRNGYFSDR-HVANSLVDMYAKCGALLLAHMLFDDIASK-DLVSWTVMI 421
Query: 249 SACKTH 254
+ H
Sbjct: 422 AGYGMH 427
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 99/209 (47%), Gaps = 3/209 (1%)
Query: 32 MPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQG 91
+ I + W L+ A++G + + M G D TF V S S L ++ G
Sbjct: 4 VKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGG 63
Query: 92 QQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFH 151
+Q+H ++K+G V +SL++ Y + +D + K F E DV+ W+S+I Y +
Sbjct: 64 EQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSN 123
Query: 152 GKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKK-YRRKPRLE 210
G E+ +++F QM E + T VS+ C+ L G + VK + R+ R
Sbjct: 124 GLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRF- 182
Query: 211 HYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
++D+ +CG LD A A+ R M ++
Sbjct: 183 -CNTLLDMYSKCGDLDSAKAVFREMSDRS 210
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 85/176 (48%), Gaps = 14/176 (7%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ D +SL MY K G+L+ + + +++++W +IAG +G ++ + +
Sbjct: 378 GYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALF 437
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV--ISSLISMYS 118
N MR G D+I+FVS++ +CS + +G + +++ ++ V + ++ M +
Sbjct: 438 NQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFF-NIMRHECKIEPTVEHYACIVDMLA 496
Query: 119 RCGCLDDSVKTFLECEY----SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFE 170
R G D +K + E D +W +++ H + L E++ +K FE
Sbjct: 497 RTG---DLIKAYRFIENMPIPPDATIWGALLCGCRIH----HDVKLAEKVAEKVFE 545
>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 697
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 170/439 (38%), Positives = 260/439 (59%), Gaps = 15/439 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ GS+L MY + G + V + +N ++W LIAG A+ G E L + M+
Sbjct: 199 DVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQ 258
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
GF T+ SV S+ + + L QG+ +HA ++K+G L V ++++ MY++ G +
Sbjct: 259 RNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMI 318
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D+ K F + DVV W+SM+ A+ +G G EA+ FE+M + N +TF+S+L ACS
Sbjct: 319 DARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACS 378
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL ++G ++FD+M K+Y +P ++HY VVDLLGR G L++A I MP+K A +W
Sbjct: 379 HGGLVKEGKQYFDMM-KEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVW 437
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
LL +C+ HK+ + A+ + ++P D P VLL NI+AS +W + R+ M+
Sbjct: 438 GALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRKMMKAT 497
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
VKKEP SW+EI+N VH F D +HPRS EI EE++ +++ GYVP+T + +
Sbjct: 498 GVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAGYVPNTDYVLLHV 557
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVML--------------PFKYISEIKNREIIV 410
D +E++ L++HSEK+A+AFA L + F+YIS++ REI+V
Sbjct: 558 DEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFRYISKVFKREIVV 617
Query: 411 RDASRFHHFRNGKCSCGDY 429
RD +RFHHF +G CSCGDY
Sbjct: 618 RDTNRFHHFSSGSCSCGDY 636
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 131/241 (54%), Gaps = 2/241 (0%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+SL H+Y K G++ + +V MP R++ +W +LIAG AQN + ++ L M F+
Sbjct: 103 NSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFK 162
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P+ TF S++ + A+ G G+QIHA VK DV V S+L+ MY+RCG +D ++
Sbjct: 163 PNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAV 222
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F + E + V W+++IA + G GE + +F +M++ FEA T+ S+ A + G
Sbjct: 223 FDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGAL 282
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
E+G M+K R T ++D+ + G + +A + + K + + W ++L+
Sbjct: 283 EQGKWVHAHMIKSGERLSAFVGNT-ILDMYAKSGSMIDARKVFDRVD-KKDVVTWNSMLT 340
Query: 250 A 250
A
Sbjct: 341 A 341
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 98/207 (47%), Gaps = 5/207 (2%)
Query: 44 IAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGA 103
+ A G+ D LD + R + P + S+I++C+ +L + IHA + +
Sbjct: 39 VPAAASTGIIRDTLDSVD-ARELAATPR--LYHSLITACARYRSLDDARAIHAHLAGSQF 95
Query: 104 SLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQ 163
+ V + +SLI +Y +CG + D+ + F D+ W+S+IA Y + +EA+ L
Sbjct: 96 AGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPG 155
Query: 164 MEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCG 223
M + F+ N TF SLL A G + L V KY + + ++D+ RCG
Sbjct: 156 MLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTV-KYDWHDDVYVGSALLDMYARCG 214
Query: 224 YLDEAAALIRNMPVKANAIIWKTLLSA 250
+D A A+ + K N + W L++
Sbjct: 215 RMDMAIAVFDQLESK-NGVSWNALIAG 240
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 87/182 (47%), Gaps = 3/182 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G L G+++ MY KSGS+++ KV + ++V+ W +++ AQ GL + + +
Sbjct: 296 GERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHF 355
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
MR G ++ITF+S++++CS + +G+Q + + ++ +++ + R
Sbjct: 356 EEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRA 415
Query: 121 GCLDDS-VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G L+D+ V F +W +++ + H + I F E + +D L
Sbjct: 416 GLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAK--IGQFAADHVFELDPDDTGPPVL 473
Query: 180 LY 181
LY
Sbjct: 474 LY 475
>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Vitis vinifera]
Length = 629
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 181/451 (40%), Positives = 264/451 (58%), Gaps = 31/451 (6%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + DL G+ L MY++ GS+ K+ MP + +I W +I+G AQNGLA VLD Y
Sbjct: 189 GLDGDLSVGNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLY 248
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G PD +T V V+SSC+ L G+++ + +G + + ++LI+MY+RC
Sbjct: 249 RKMEFTGIVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARC 308
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L + F +V+ W+++IA YG HG+GE A+ LF++M + + FVS+L
Sbjct: 309 GNLVKARAIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVL 368
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL EKG+ +F M + Y +P EHY+CVVDLLGR G L+EA LI +M V+ +
Sbjct: 369 SACSHAGLTEKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPD 428
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+W LL ACK H++ ++A E+++ P + YVLLSNI + A +G+ R
Sbjct: 429 GAVWGALLGACKIHRNVELAELAFEKVIEFEPTNIGYYVLLSNIFSEAGNMEGILRVRVM 488
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
MRER +KKEPG S++E + ++H F GD++HP++ EI L+ L +K RG G++
Sbjct: 489 MRERKLKKEPGCSYVEYQGRIHLFLAGDRTHPQAQEIYHMLDGLEDIIKRRG-----GSN 543
Query: 361 MHDMDSEEKEY--NLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKY 399
+D +S +E + HSEKLAIAF GLI P K
Sbjct: 544 DNDQESRNEELITGMGVHSEKLAIAF-----GLINTEPGTEITVIKNLRVCGDCHLFLKL 598
Query: 400 ISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+SEI +R+++VRDA+RFHHF+NG CSC DYW
Sbjct: 599 VSEIVDRQLVVRDATRFHHFKNGVCSCKDYW 629
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 149/315 (47%), Gaps = 8/315 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVI-RLMPIRNV-IAWITLIAGKAQNGLAEDVLD 58
G E + +SL MY K ++ KV RN+ + + LIAG + N D +
Sbjct: 86 GCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFSDAVL 145
Query: 59 QYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
+ MR G + +T + +I C+ LG G +HA V+ G D+ V + L++MY
Sbjct: 146 LFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLLTMYV 205
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
RCG +D + K F ++ W++MI+ Y +G ++L+ +ME + VT V
Sbjct: 206 RCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPVTLVG 265
Query: 179 LLYACSHCGLKEKGMEFFD-LMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
+L +C+H G G E + + + P L++ ++++ RCG L +A A+ M
Sbjct: 266 VLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKN--ALINMYARCGNLVKARAIFDGMTE 323
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRIAEEILGVN--PQDAAPYVLLSNIHASAKRWQGVS 295
K N I W +++ H ++A ++ +E++ + P AA +LS + +G+
Sbjct: 324 K-NVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLTEKGLY 382
Query: 296 EFREAMRERNVKKEP 310
F R+ ++ P
Sbjct: 383 YFTAMERDYGLQPGP 397
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 109/240 (45%), Gaps = 18/240 (7%)
Query: 54 EDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSL 113
++ L+ Y M G P+ TF SC+ L+ G Q+H V+K G + V +SL
Sbjct: 38 QEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQLHGHVIKTGCEPEPFVQTSL 97
Query: 114 ISMYSRCGCLDDSVKTFLECEYSD--VVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEA 171
ISMY +C + + K F E +S V ++++IA Y + + +A+ LF QM ++
Sbjct: 98 ISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFSDAVLLFRQMRKEGVSV 157
Query: 172 NDVTFVSLLYACS---HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEA 228
N VT + L+ C+ H G G V ++ L C++ + RCG +D A
Sbjct: 158 NAVTMLGLIPVCAGPIHLGF---GTSLHACSV-RFGLDGDLSVGNCLLTMYVRCGSVDFA 213
Query: 229 AALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAE-----EILGVNPQDAAPYVLLSN 283
L MP K I W ++S + +AG + + E G+ P +LS+
Sbjct: 214 RKLFDGMPEKG-LITWNAMISG---YAQNGLAGHVLDLYRKMEFTGIVPDPVTLVGVLSS 269
>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
Length = 795
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 177/450 (39%), Positives = 259/450 (57%), Gaps = 25/450 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+++ LV G++L +Y GSL E + + R+ W LI G ++ G VL+ Y
Sbjct: 351 GYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELY 410
Query: 61 NLMRMVGFRP-DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
M+ P KI + VIS+C+ L +Q H+++ G D + +SL++MYSR
Sbjct: 411 REMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSR 470
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G L+ + + F + D + W+++IA Y HG+ A+ L+++ME + E +++TF+ +
Sbjct: 471 WGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVV 530
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
LYACSH GL+E+G + F + Y P + HY+C++DLL R G L +A LI MPV+
Sbjct: 531 LYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEP 590
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
N + W +LL A + HK A A +I ++P D A YVLLSN+HA G++ R
Sbjct: 591 NDVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMASVRN 650
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M R VKK G SW+E+ +Q+H+F +GD SHPR EI L+ L+ ++K GYVP++
Sbjct: 651 TMVARGVKKRRGSSWIEVADQIHEFNVGDNSHPRFQEIFAELQRLSPKIKEAGYVPESEE 710
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYI 400
+HD+ +EKE L+ HSEKLAIAF GLI P K+I
Sbjct: 711 VLHDVGEKEKELLLRLHSEKLAIAF-----GLIATAPGTTLRIFNTLRICHDCHSAVKFI 765
Query: 401 SEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
S I REIIVRD+SRFH FR+G+CSCGDYW
Sbjct: 766 SAIARREIIVRDSSRFHKFRDGQCSCGDYW 795
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 135/248 (54%), Gaps = 5/248 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +LD++ +SL MY K GSL + +++ M R+V +W +IA AQ+G E+ + Y
Sbjct: 152 GLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLY 211
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M + P TF SV+S+CS L L QG++IHA + G LD+ + ++L++MY+RC
Sbjct: 212 EDMDV---EPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARC 268
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
CLDD+ K F DVV WS+MIAA+ +EAI + +M+ + N TF S+L
Sbjct: 269 KCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVL 328
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+ G G D ++ K L + T +VDL G LDEA +L + +
Sbjct: 329 LACASVGDLRAGRAVHDQILGN-GYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDE 387
Query: 241 AIIWKTLL 248
+W L+
Sbjct: 388 G-LWTVLI 394
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 130/243 (53%), Gaps = 9/243 (3%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G+ + Y K GS+ + +N +W +++ AQNG LD Y M +
Sbjct: 61 GNEIVRAYGKCGSVASARAAFDAIARKNDYSWGSMLTAYAQNGHYRAALDLYKRMDL--- 117
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSRCGCLDDSV 127
+P+ + + +V+ +C+ + L +G+ IH+ + G LDV + +SL++MY++CG L+D+
Sbjct: 118 QPNPVVYTTVLGACASIKALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAK 177
Query: 128 KTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCG 187
+ F V W++MIAAY G EEAI L+E M + E + TF S+L ACS+ G
Sbjct: 178 RLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLYEDM---DVEPSVRTFTSVLSACSNLG 234
Query: 188 LKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTL 247
L ++G + L+ + + L ++ + RC LD+AA + + +P + + + W +
Sbjct: 235 LLDQGRKIHALISSR-GTELDLSLQNALLTMYARCKCLDDAAKIFQRLP-RRDVVSWSAM 292
Query: 248 LSA 250
++A
Sbjct: 293 IAA 295
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 145/305 (47%), Gaps = 15/305 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G ELDL ++L MY + L + K+ + +P R+V++W +IA A+ L ++ ++ Y
Sbjct: 250 GTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFY 309
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M++ G RP+ TF SV+ +C+ + L G+ +H +++ G + + ++L+ +Y+
Sbjct: 310 SKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSY 369
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQ-KEFEANDVTFVSL 179
G LD++ F + E D LW+ +I Y G + L+ +M+ + A + + +
Sbjct: 370 GSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCV 429
Query: 180 LYACSHCGLKEKGMEFF-----DLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRN 234
+ AC+ G + D M+ + T +V++ R G L+ A +
Sbjct: 430 ISACASLGAFADARQAHSDIEADGMISDFVLA------TSLVNMYSRWGNLESARQVFDK 483
Query: 235 MPVKANAIIWKTLLSACKTHKSTDMA-GRIAE-EILGVNPQDAAPYVLLSNIHASAKRWQ 292
M + + + W TL++ H +A G E E+ G P + V+L + + Q
Sbjct: 484 MSSR-DTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQ 542
Query: 293 GVSEF 297
G F
Sbjct: 543 GKQLF 547
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 91/198 (45%), Gaps = 9/198 (4%)
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
+ + C +L ++ +QIH + + AS +V + + ++ Y +CG + + F
Sbjct: 30 YRDALRQCQDLESV---RQIH-DRISGAASANVFLGNEIVRAYGKCGSVASARAAFDAIA 85
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGME 194
+ W SM+ AY +G A++L+++M + + N V + ++L AC+ E+G
Sbjct: 86 RKNDYSWGSMLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIKALEEGKA 142
Query: 195 FFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
+ K + ++ + +CG L++A L M ++ + W +++A
Sbjct: 143 IHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVS-SWNAMIAAYAQS 201
Query: 255 KSTDMAGRIAEEILGVNP 272
+ A R+ E+ + V P
Sbjct: 202 GHFEEAIRLYED-MDVEP 218
>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
Length = 649
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 174/440 (39%), Positives = 260/440 (59%), Gaps = 15/440 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D V+ ++ Y +G VE ++ M + NV W +IA QNG A++ + ++ MR
Sbjct: 211 DDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNV-TWNVIIAAYMQNGHAKEAISSFHQMR 269
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+ F P+ +TFVSV+ + + LA +G HA +++ G + V +SLI MY++CG LD
Sbjct: 270 LENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLD 329
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
S K F E ++ D V W++M++ Y HG G+ AI LF M++ + + + V+FVS+L AC
Sbjct: 330 YSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACR 389
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL E+G + F M KY KP LEHY C+VDLLGR G DE I+ MPV+ +A +W
Sbjct: 390 HAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVW 449
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
LL +C+ H + + + ++ + P++ A +V+LS+I+A + RW + R M +
Sbjct: 450 GALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDL 509
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
+KK PG SW+E+KN+VH F +GDKSHP+ + L L +M+ GYVPD + ++
Sbjct: 510 GLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVLQNV 569
Query: 365 DSEEKEYNLKHHSEKLAIAFA----------EHTRGLIVM----LPFKYISEIKNREIIV 410
+ E+KE L HSE+LAI FA + + L V K+IS+I R IIV
Sbjct: 570 EEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCADCHTTTKFISKITTRRIIV 629
Query: 411 RDASRFHHFRNGKCSCGDYW 430
RDA+RFHHF +G CSC DYW
Sbjct: 630 RDATRFHHFEDGICSCNDYW 649
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 96/192 (50%), Gaps = 13/192 (6%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF + + G+SL MY K G L EK+ M ++ ++W +++G A +G + + +
Sbjct: 307 GFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALF 366
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQI-HAEVVKAGASLDVGVISSLISMYSR 119
+LM+ + D ++FVSV+S+C + +G++I H+ K D+ + ++ + R
Sbjct: 367 SLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGR 426
Query: 120 CGCLDDSVK--TFLECEYSDVVLWSSMIAAYGFHGK---GEEAINLFEQMEQKEFEANDV 174
G D+++ + E D +W +++ + H GE A++ ++E + N
Sbjct: 427 AGLFDETLGFIKVMPVE-PDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPR----NPA 481
Query: 175 TFVSL--LYACS 184
FV L +YA S
Sbjct: 482 HFVVLSSIYAQS 493
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 96/253 (37%), Gaps = 64/253 (25%)
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVV-KAGASLDVGVISSLISMYSRCGCLDDSVK 128
P +I + S+I + + + +++ +V K G DV + + L+ MYS+ G L + +
Sbjct: 112 PSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGGLERDVFIGAGLVDMYSKMGDLKRARE 171
Query: 129 TFLECEYSDVVLWSSMI-------------------------------AAYGFHGKGEEA 157
F + DVV W++MI A Y +G E
Sbjct: 172 VFDKMPKRDVVAWNAMIAGLSQSEDPYVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEV 231
Query: 158 INLFE------------------------------QMEQKEFEANDVTFVSLLYACSHCG 187
+ LF+ QM + F N VTFVS+L A ++
Sbjct: 232 LELFDKMKLGNVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLA 291
Query: 188 LKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTL 247
+GM F +++ L + ++D+ +CG LD + L M K + + W +
Sbjct: 292 AFREGMAFHACIIQMGFLSNTLVGNS-LIDMYAKCGQLDYSEKLFNEMDHK-DTVSWNAM 349
Query: 248 LSACKTHKSTDMA 260
LS H D A
Sbjct: 350 LSGYAVHGHGDRA 362
>gi|224080790|ref|XP_002306231.1| predicted protein [Populus trichocarpa]
gi|222849195|gb|EEE86742.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 171/442 (38%), Positives = 272/442 (61%), Gaps = 25/442 (5%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G++L Y+K G++ E KV + + ++++AW +I G AQ G E + + M
Sbjct: 44 GTALLDAYVKRGNVDEASKVFQRIEEKDIVAWSAMICGYAQIGDTEGAVRIFVQMAKEKI 103
Query: 69 RPDKITFVSVISSCS-ELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV 127
+P++ TF +I++C+ A + QG+Q+HA +K+ + + V S+L++MYS+ G ++ +
Sbjct: 104 KPNEYTFSGIINACAAPTAGVEQGKQLHAWSIKSRFNNALCVSSALLTMYSKRGDIESAF 163
Query: 128 KTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCG 187
+ F D+V W+S+I+ Y HG G +A+ +FE+M+++ E + VTF+ ++ AC+H G
Sbjct: 164 EVFKRQRERDLVSWNSIISGYAQHGYGRKALEVFEEMQRQNLEMDGVTFIGVISACTHTG 223
Query: 188 LKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTL 247
L +G +FD+MVK + +PR+EHY+C+VDL GR G L +A +I MP A+A +W+TL
Sbjct: 224 LANEGQRYFDIMVKDHHIEPRMEHYSCMVDLYGRAGMLVKAMEIINEMPFPASANVWRTL 283
Query: 248 LSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVK 307
L+A H++ ++ A++++ + PQ+ A YVLL+N++AS W+ ++ R+ M E+ VK
Sbjct: 284 LAASCIHRNLEVGKLAADKLISLQPQNPASYVLLTNMYASVGNWKERAKVRKLMEEKKVK 343
Query: 308 KEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSE 367
K G SW+E+KN+ + F GD SHP S +I LEEL+ ++K GY PDT D+D E
Sbjct: 344 KVAGYSWIEVKNKTYTFLAGDVSHPLSNQIYAKLEELSCQLKGAGYQPDTSYVFQDVDEE 403
Query: 368 EKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREI 408
KE L HSE+LAIAF GLI P K IS ++ R+I
Sbjct: 404 HKEAILSQHSERLAIAF-----GLIGTPPGTPLQIVKNLRVCGDCHSVIKLISILEGRDI 458
Query: 409 IVRDASRFHHFRNGKCSCGDYW 430
+VRD++RFHHF+ G CSCGDYW
Sbjct: 459 VVRDSNRFHHFKGGLCSCGDYW 480
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 101/211 (47%), Gaps = 17/211 (8%)
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M G +P+ T+ +++++ ++ ++HA+ +K V ++L+ Y + G
Sbjct: 1 MSREGIKPNDFTYSTILTAQPGVSPF----EMHAQAIKRNYVKSPSVGTALLDAYVKRGN 56
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
+D++ K F E D+V WS+MI Y G E A+ +F QM +++ + N+ TF ++ A
Sbjct: 57 VDEASKVFQRIEEKDIVAWSAMICGYAQIGDTEGAVRIFVQMAKEKIKPNEYTFSGIINA 116
Query: 183 CS--HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV----VDLLGRCGYLDEAAALIRNMP 236
C+ G+ E+G + +K R + CV + + + G ++ A + +
Sbjct: 117 CAAPTAGV-EQGKQLHAWSIKS-----RFNNALCVSSALLTMYSKRGDIESAFEVFKRQR 170
Query: 237 VKANAIIWKTLLSACKTHKSTDMAGRIAEEI 267
+ + + W +++S H A + EE+
Sbjct: 171 ER-DLVSWNSIISGYAQHGYGRKALEVFEEM 200
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 74/152 (48%), Gaps = 2/152 (1%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F L S+L MY K G + +V + R++++W ++I+G AQ+G L+ +
Sbjct: 139 FNNALCVSSALLTMYSKRGDIESAFEVFKRQRERDLVSWNSIISGYAQHGYGRKALEVFE 198
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSRC 120
M+ D +TF+ VIS+C+ +GQ+ +VK + S ++ +Y R
Sbjct: 199 EMQRQNLEMDGVTFIGVISACTHTGLANEGQRYFDIMVKDHHIEPRMEHYSCMVDLYGRA 258
Query: 121 GCLDDSVKTFLECEY-SDVVLWSSMIAAYGFH 151
G L +++ E + + +W +++AA H
Sbjct: 259 GMLVKAMEIINEMPFPASANVWRTLLAASCIH 290
>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 174/444 (39%), Positives = 262/444 (59%), Gaps = 15/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ ++ GS+L +Y + G + + + V + RN ++W LIAG A+ E L+ +
Sbjct: 182 GFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGTEKALELF 241
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M GFRP ++ S+ +CS L QG+ +HA ++K+G L ++L+ MY++
Sbjct: 242 QGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKS 301
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + D+ K F DVV W+S++ AY HG G EA+ FE+M + N+++F+S+L
Sbjct: 302 GSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVL 361
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL ++G +++LM KK HY +VDLLGR G L+ A I MP++
Sbjct: 362 TACSHSGLLDEGWHYYELM-KKDGIVLEAWHYVTIVDLLGRAGDLNRALRFIEEMPIEPT 420
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A IWK LL+AC+ HK+T++ AE + ++P D P+V+L NI+AS RW + R+
Sbjct: 421 AAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKK 480
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+E VKKEP SW+EI+N +H F D+ HP+ EI EE+ +++K GYVPDT
Sbjct: 481 MKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHV 540
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAE---------HTRGLIVML-----PFKYISEIKNR 406
+ +D +E+E NL++HSEK+A+AFA H + I + K S+ R
Sbjct: 541 IVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHSAIKLASKAVGR 600
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EIIVRD +RFHHF++G CSC DYW
Sbjct: 601 EIIVRDTNRFHHFKDGACSCKDYW 624
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 139/275 (50%), Gaps = 4/275 (1%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F DLV ++L +MY K GSL E KV MP R+ + W TLI+G +Q+ D L +N
Sbjct: 82 FRHDLVMNNTLLNMYAKCGSLEEARKVFDKMPERDFVTWTTLISGYSQHDRPFDALVLFN 141
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M GF P++ T SVI + + G Q+H VK G +V V S+L+ +Y+R G
Sbjct: 142 QMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYG 201
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+DD+ F E + V W+++IA + E+A+ LF+ M ++ F + ++ SL
Sbjct: 202 LMDDAQLVFDALESRNDVSWNALIAGHARRCGTEKALELFQGMLREGFRPSHFSYASLFG 261
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
ACS G E+G M+K + T ++D+ + G + +A + + K +
Sbjct: 262 ACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNT-LLDMYAKSGSIHDARKIFDRL-AKRDV 319
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQD 274
+ W +LL+A H + A EE+ G+ P +
Sbjct: 320 VSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNE 354
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 99/198 (50%), Gaps = 16/198 (8%)
Query: 71 DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTF 130
D+ + +++ C+ L QG+ +H ++++ D+ + ++L++MY++CG L+++ K F
Sbjct: 50 DRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVF 109
Query: 131 LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH----- 185
+ D V W+++I+ Y H + +A+ LF QM + F N+ T S++ A +
Sbjct: 110 DKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGC 169
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
CG + G K + + ++DL R G +D+A + + + N + W
Sbjct: 170 CGHQLHG------FCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESR-NDVSWN 222
Query: 246 TLLSA----CKTHKSTDM 259
L++ C T K+ ++
Sbjct: 223 ALIAGHARRCGTEKALEL 240
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 177/451 (39%), Positives = 259/451 (57%), Gaps = 27/451 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRL-MPIRNVIAWITLIAGKAQNGLAEDVLDQ 59
GFE D+ G++L MY K+G + V + RNV+++ LI G + E L
Sbjct: 237 GFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSV 296
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ +R G P++ TF S+I +C+ A L QG Q+HA+V+K D V S L+ MY +
Sbjct: 297 FVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGK 356
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG L+ +++ F E + W+S+++ +G HG G++AI +FE+M + + N +TF+SL
Sbjct: 357 CGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISL 416
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L CSH GL E+G+++F M K Y P EHY+CV+DLLGR G L EA I MP +
Sbjct: 417 LTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEP 476
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
NA W + L AC+ H +M AE+++ + P+++ VLLSNI+A+ ++W+ V R
Sbjct: 477 NAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRM 536
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
MR+ NVKK PG SW+++ + H F D SHPR I L+ L ++K GYVP T +
Sbjct: 537 RMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAGYVPRTDS 596
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP--------------------FKY 399
DMD KE L HSE++A+AFA ++ +P K+
Sbjct: 597 VPLDMDDSMKEKLLHRHSERIAVAFA------LISMPIGKPIIVKKNLRVCVDCHSAIKF 650
Query: 400 ISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
IS++ R+IIVRD SRFHHF +G CSCGDYW
Sbjct: 651 ISKVTGRKIIVRDNSRFHHFTDGSCSCGDYW 681
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 139/302 (46%), Gaps = 35/302 (11%)
Query: 12 LAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPD 71
L +MY K G L K+ MP RN+++W +I+G +QN + + + MR+ G P
Sbjct: 46 LVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPT 105
Query: 72 KITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFL 131
+ F S I +C+ L ++ G+Q+H +K G ++ V S+L MYS+CG + D+ K F
Sbjct: 106 QFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFE 165
Query: 132 ECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS------- 184
E D V W++MI Y G+ EEA+ F++M +E + S L AC
Sbjct: 166 EMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKF 225
Query: 185 ----HCGLKEKGME----FFDLMVKKYRRKPRLE----------------HYTCVVDLLG 220
H + + G E + + Y + +E YTC++D
Sbjct: 226 GRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYV 285
Query: 221 RCGYLDEAAAL---IRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAP 277
+++ ++ +R ++ N + +L+ AC + + ++ +++ +N D P
Sbjct: 286 ETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKIN-FDEDP 344
Query: 278 YV 279
+V
Sbjct: 345 FV 346
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 147/301 (48%), Gaps = 7/301 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +L GS+L MY K G++ + KV MP ++ ++W +I G ++ G E+ L +
Sbjct: 136 GIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAF 195
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M D+ S + +C L G+ +H+ VVK G D+ V ++L MYS+
Sbjct: 196 KKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKA 255
Query: 121 GCLDDSVKTF-LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G ++ + F ++ E +VV ++ +I Y + E+ +++F ++ ++ E N+ TF SL
Sbjct: 256 GDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSL 315
Query: 180 LYACSHCGLKEKGMEFFDLMVK-KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+ AC++ E+G + ++K + P + + +VD+ G+CG L++A +
Sbjct: 316 IKACANQAALEQGTQLHAQVMKINFDEDPFVS--SILVDMYGKCGLLEQAIQAFDEIG-D 372
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSE 296
I W +L+S H A +I E ++ GV P LL+ + +G+
Sbjct: 373 PTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDY 432
Query: 297 F 297
F
Sbjct: 433 F 433
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 86/178 (48%), Gaps = 2/178 (1%)
Query: 71 DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTF 130
D VI + ++ L +G+Q+HA ++ AG + + + L++MYS+CG LD ++K F
Sbjct: 4 DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63
Query: 131 LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKE 190
++V W++MI+ + K EAI F M F S + AC+ G E
Sbjct: 64 DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIE 123
Query: 191 KGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
G + L + K+ L + + D+ +CG + +A + MP K + + W ++
Sbjct: 124 MGKQMHCLAL-KFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCK-DEVSWTAMI 179
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 170/436 (38%), Positives = 259/436 (59%), Gaps = 14/436 (3%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G++L MY K+ L + E + + R++ AW ++AG AQ+G E + + M+ G
Sbjct: 329 GTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGV 388
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
+P++ T S +S CS +ATL G+Q+H+ +KAG S D+ V S+L+ MY++CGC++D+
Sbjct: 389 KPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEV 448
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F D V W+++I Y HG+G +A+ FE M + ++VTF+ +L ACSH GL
Sbjct: 449 VFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGL 508
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
E+G + F+ + K Y P +EHY C+VD+LGR G E + I M + +N +IW+T+L
Sbjct: 509 IEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVL 568
Query: 249 SACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKK 308
ACK H + + R A ++ + P+ + Y+LLSN+ A+ W V+ R M R VKK
Sbjct: 569 GACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKK 628
Query: 309 EPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEE 368
EPG SW+E+ QVH F D SHP+ EI L L++L ++ GY P+T +H++ E
Sbjct: 629 EPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKLMSVGYTPNTDHVLHNVSDRE 688
Query: 369 KEYNLKHHSEKLAIAFA---EHTRGLIVMLP-----------FKYISEIKNREIIVRDAS 414
K+ L +HSE+LA+AFA TR I + K ISEI N+E++VRD +
Sbjct: 689 KQELLFYHSERLALAFALLSTSTRKTIRIFKNLRICGDCHDFMKSISEITNQELVVRDIN 748
Query: 415 RFHHFRNGKCSCGDYW 430
FHHF+NG CSC ++W
Sbjct: 749 CFHHFKNGSCSCQNFW 764
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 137/275 (49%), Gaps = 5/275 (1%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+SL ++Y K GS KV +P R+V++W LI G G L +N M GF
Sbjct: 230 NSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEGYGSG-LRIFNQMLAEGFN 288
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P+ TF+S++ SCS L+ + G+Q+HA++VK + V ++L+ MY++ L+D+
Sbjct: 289 PNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETI 348
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F D+ W+ ++A Y G+GE+A+ F QM+++ + N+ T S L CS
Sbjct: 349 FNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATL 408
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
+ G + + +K + + +VD+ +CG +++A + + V + + W T++
Sbjct: 409 DSGRQLHSMAIKAGQSGDMFV-ASALVDMYAKCGCVEDAEVVFDGL-VSRDTVSWNTIIC 466
Query: 250 ACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLS 282
H A + E +L G P + +LS
Sbjct: 467 GYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLS 501
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 128/250 (51%), Gaps = 3/250 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE D++ ++ MYMK+ S+ G + + M I N+ + L++G +
Sbjct: 120 GFESDILISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRIL 179
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ + GF P+ TF+S++ +C+ L +G+ IH +V+K+G + D + +SL+++Y++C
Sbjct: 180 IQLLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKC 239
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + K F E DVV W+++I + G G + +F QM + F N TF+S+L
Sbjct: 240 GSANYACKVFGEIPERDVVSWTALITGFVAEGYG-SGLRIFNQMLAEGFNPNMYTFISIL 298
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
+CS + G + +VK T +VD+ + +L++A I N +K +
Sbjct: 299 RSCSSLSDVDLGKQVHAQIVKNSLDGNDFVG-TALVDMYAKNRFLEDAET-IFNRLIKRD 356
Query: 241 AIIWKTLLSA 250
W +++
Sbjct: 357 LFAWTVIVAG 366
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 115/241 (47%), Gaps = 2/241 (0%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
SSL ++Y+K SL +V+ MPI++V W ++ ++ + + LMR R
Sbjct: 28 SSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEAVQLFYLMRHTRIR 87
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
++ F S+IS+ + L G+ IHA V K G D+ + ++ ++MY + +++ +
Sbjct: 88 LNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTMYMKTQSVENGWQF 147
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F ++ +++++ + ++ + Q+ + FE N TF+S+L C+ G
Sbjct: 148 FKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFISILKTCASKGDL 207
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
+G ++K P + +V++ +CG + A + +P + + + W L++
Sbjct: 208 NEGKAIHGQVIKS-GINPDSHLWNSLVNVYAKCGSANYACKVFGEIPER-DVVSWTALIT 265
Query: 250 A 250
Sbjct: 266 G 266
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 95/185 (51%), Gaps = 10/185 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ S+L MY K G + + E V + R+ ++W T+I G +Q+G L + M
Sbjct: 426 DMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAML 485
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSRCGCL 123
G PD++TF+ V+S+CS + + +G++ + K G + + + ++ + R G
Sbjct: 486 DEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKF 545
Query: 124 DDSVKTFLE--CEYSDVVLWSSMIAAYGFHGKGE----EAINLFEQMEQKEFEANDVTFV 177
+ V++F+E S+V++W +++ A HG E A+ LFE + E ++N +
Sbjct: 546 HE-VESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFEL--EPEIDSNYILLS 602
Query: 178 SLLYA 182
++ A
Sbjct: 603 NMFAA 607
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 80/201 (39%), Gaps = 7/201 (3%)
Query: 92 QQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFH 151
++I V+K G D + SSL+++Y +C L + + E DV W+ +++
Sbjct: 9 KKIIFRVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSP 68
Query: 152 GKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEH 211
+EA+ LF M N F SL+ A + G G E V KY + +
Sbjct: 69 YPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYG-ESIHACVCKYGFESDILI 127
Query: 212 YTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--G 269
V + + ++ + M ++ N LLS ++ D RI ++L G
Sbjct: 128 SNAFVTMYMKTQSVENGWQFFKAMMIE-NLASRNNLLSGFCDTETCDQGPRILIQLLVEG 186
Query: 270 VNPQDAAPYVLLSNIHASAKR 290
P Y +S + A +
Sbjct: 187 FEPN---MYTFISILKTCASK 204
>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1724
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 170/444 (38%), Positives = 262/444 (59%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE D +SL MY K G L + + ++ I W ++A A +G E+ L +
Sbjct: 1281 GFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIF 1340
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
MR VG D+ +F +++ + LA L +GQQ+H V+K G D+ V ++ + MY +C
Sbjct: 1341 GEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKC 1400
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + D +K + + W+ +I+A+ HG ++A F +M + + + VTFVSLL
Sbjct: 1401 GEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLL 1460
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+H GL ++G+ ++D M +++ P +EH C++DLLGR G L A I+ MPV N
Sbjct: 1461 SACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPN 1520
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+ W++LL+AC+ H + ++A + AE +L ++P D + YVL SN+ A++ +W+ V R+
Sbjct: 1521 DLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKE 1580
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M N+KK+P SW+++K++VH F MG+K HP++ I L EL K GYVPDT
Sbjct: 1581 MGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKEAGYVPDTSFA 1640
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA------EHTRGLIVMLP--------FKYISEIKNR 406
+HDMD E+KEYNL +HSE+LA+AF T + L +K++S I R
Sbjct: 1641 LHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFKNLRVCGDCHSVYKFVSGIVGR 1700
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
+I++RD RFHHF GKCSCGDYW
Sbjct: 1701 KIVLRDPYRFHHFSGGKCSCGDYW 1724
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 115/313 (36%), Positives = 186/313 (59%), Gaps = 2/313 (0%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGL-AEDVLDQYNLM 63
D+V G L + Y K+GSL + + + M +++ + LI G A G+ + D LD + M
Sbjct: 267 DIVTGL-LINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEM 325
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
+ D + S+++ C+ LA+ G QIHA +K S DV + ++LI MY++ G +
Sbjct: 326 NQMNIGMDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEI 385
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
+D+ + F E E +V+ W+S+I+ Y HG G A++L+++ME K F+ NDVTF+SLL+AC
Sbjct: 386 EDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFAC 445
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
SH GL +G E F+ MV KY KPR EHY+C+VDL R G L+EA L+ + +K NA +
Sbjct: 446 SHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASL 505
Query: 244 WKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
W +L A + + A + + P+++ YV+L++I+++A W + R+ M E
Sbjct: 506 WGAILGASSIYGYMSLGKEAASNLFNMQPENSVNYVVLASIYSAAGLWDDAWKIRKLMEE 565
Query: 304 RNVKKEPGVSWLE 316
R+ KK G S+ +
Sbjct: 566 RSTKKNAGYSFFQ 578
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 156/315 (49%), Gaps = 7/315 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF L+ G++L MY K G ++E +KV++ MP + + W LI G A+N + + Y
Sbjct: 1179 GFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAY 1238
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATL-GQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
L+R G + IT VSV+ +CS L G IHA +V G D V +SLI+MY++
Sbjct: 1239 KLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAK 1298
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG L+ S F + W++M+AA HG GEEA+ +F +M + +F
Sbjct: 1299 CGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGG 1358
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L A ++ + E+G + L++ K + L +D+ G+CG + + ++ P+
Sbjct: 1359 LAATANLAVLEEGQQLHGLVI-KLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQ-PINR 1416
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQ-DAAPYV-LLSNIHASAKRWQGVSEF 297
+ + W L+SA H A E+L + P+ D +V LLS + +G++ +
Sbjct: 1417 SRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYY 1476
Query: 298 REAMRERNVKKEPGV 312
RE V PG+
Sbjct: 1477 DSMTREFGVF--PGI 1489
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 88/171 (51%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ G++L H Y G + +K+ MP NV++W +L+ G + +G +VL+ Y MR
Sbjct: 880 DVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMR 939
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G ++ TF +V SSC L G Q+ +++ G V V +SLISM+S ++
Sbjct: 940 QEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVE 999
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVT 175
++ F D++ W++MI+AY HG E++ F M E N T
Sbjct: 1000 EACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTT 1050
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 125/255 (49%), Gaps = 7/255 (2%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
L + ++L +MY K G++ V M RN +W T+++G + GL E+ + +
Sbjct: 776 NLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQ 835
Query: 63 MRMVGFRPDKITFVSVISSCSELATLG-QGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M +G P+ S+I++CS + +G Q+H VVK G DV V ++L+ Y G
Sbjct: 836 MWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIG 895
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+ ++ K F E +VV W+S++ Y G E +N++++M Q+ N TF ++
Sbjct: 896 LVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATV-- 953
Query: 182 ACSHCGLKEKGMEFFDLM--VKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
S CGL E + + ++ + +Y + + ++ + ++EA + +M +
Sbjct: 954 -TSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMN-EC 1011
Query: 240 NAIIWKTLLSACKTH 254
+ I W ++SA H
Sbjct: 1012 DIISWNAMISAYAHH 1026
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 94/187 (50%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF DL + L Y+K G ++ V MP R+V++W +++G +QNG E +
Sbjct: 60 GFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLF 119
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ MR G + ++ T+ S + +C+ L L G Q+ + K ++ V S+L+ +S+C
Sbjct: 120 SDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKC 179
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++D+ F DVV W++MI Y G +++ +F M + + T S+L
Sbjct: 180 GKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVL 239
Query: 181 YACSHCG 187
A + G
Sbjct: 240 RASAEGG 246
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 132/310 (42%), Gaps = 7/310 (2%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F +L S+L + K G + + + M R+V++W +I G A G A+D +
Sbjct: 162 FVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFR 221
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAG-ASLDVGVISSLISMYSRC 120
M G PD T SV+ + +E L QIH + + G S D+ V LI+ Y++
Sbjct: 222 SMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDI-VTGLLINAYAKN 280
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHG-KGEEAINLFEQMEQKEFEANDVTFVSL 179
G L + D+ +++I Y G +A++LF++M Q +DV S+
Sbjct: 281 GSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSM 340
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L C++ G + + KY+ + ++D+ + G +++A M K
Sbjct: 341 LNICANLASFALGTQIHAFAL-KYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEK- 398
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAE--EILGVNPQDAAPYVLLSNIHASAKRWQGVSEF 297
N I W +L+S H MA + + E G P D LL + +G F
Sbjct: 399 NVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECF 458
Query: 298 REAMRERNVK 307
+ + N+K
Sbjct: 459 NNMVNKYNIK 468
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 140/275 (50%), Gaps = 7/275 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + ++ ++L +Y ++G + E V + M R++I+W +++A Q+G D L
Sbjct: 1078 GLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKIL 1137
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ +G + +TF S +++CS L + + +HA ++ AG + V ++L++MY +
Sbjct: 1138 AELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKL 1197
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + ++ K D V W+++I + + + EA+ ++ + +K AN +T VS+L
Sbjct: 1198 GMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVL 1257
Query: 181 YACSHC-GLKEKGMEFF-DLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
ACS L + GM +++ + +++ ++ + +CG L+ + + + K
Sbjct: 1258 GACSAPDDLLKHGMPIHAHIVLTGFESDDYVKN--SLITMYAKCGDLNSSNYIFDGLGNK 1315
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEI--LGVN 271
+ I W +++A H + A +I E+ +GVN
Sbjct: 1316 S-PITWNAMVAANAHHGCGEEALKIFGEMRNVGVN 1349
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 124/259 (47%), Gaps = 20/259 (7%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE + +SL M+ S+ E V M ++I+W +I+ A +GL + L +
Sbjct: 977 GFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCF 1036
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ MR + + T S++S CS + L G+ IH VVK G +V + ++L+++YS
Sbjct: 1037 HWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEA 1096
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +D+ F D++ W+SM+A Y GK + + + ++ Q N VTF S L
Sbjct: 1097 GRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASAL 1156
Query: 181 YACSH--CGLKEKGME-------FFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAAL 231
ACS+ C ++ K + F D ++ +V + G+ G + EA +
Sbjct: 1157 AACSNPECLIESKIVHALIIVAGFHDFLIVG----------NALVTMYGKLGMMMEAKKV 1206
Query: 232 IRNMPVKANAIIWKTLLSA 250
++ MP + + + W L+
Sbjct: 1207 LQTMP-QPDRVTWNALIGG 1224
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 85/182 (46%), Gaps = 2/182 (1%)
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
R D ++ ++ C + QG IH ++ G D+ + + LI Y + G + +
Sbjct: 27 RLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARN 86
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F VV W++M++ Y +G+ E+A LF M +AN T+ S L AC+
Sbjct: 87 VFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRC 146
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
+ G++ ++K R L + +VD +CG +++A+ L M ++ + + W ++
Sbjct: 147 LDMGIQ-VQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTM-MERDVVSWNAMI 204
Query: 249 SA 250
Sbjct: 205 GG 206
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 3/167 (1%)
Query: 83 SELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWS 142
SE+ + G+ +HA + +L + ++LI+MYS+ G ++ + F E + + WS
Sbjct: 755 SEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWS 814
Query: 143 SMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCG-LKEKGMEFFDLMVK 201
+M++ Y G EEA+ LF QM E N SL+ ACS G + ++G + +VK
Sbjct: 815 TMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVK 874
Query: 202 KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
+ T +V G G + A L MP N + W +L+
Sbjct: 875 T-GILGDVYVGTALVHFYGSIGLVYNAQKLFEEMP-DHNVVSWTSLM 919
>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
Length = 796
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 177/450 (39%), Positives = 259/450 (57%), Gaps = 25/450 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+++ LV G++L +Y GSL E + + R+ W LI G ++ G VL+ Y
Sbjct: 352 GYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELY 411
Query: 61 NLMRMVGFRP-DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
M+ P KI + VIS+C+ L +Q H+++ G D + +SL++MYSR
Sbjct: 412 REMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSR 471
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G L+ + + F + D + W+++IA Y HG+ A+ L+++ME + E +++TF+ +
Sbjct: 472 WGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVV 531
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
LYACSH GL+E+G + F + Y P + HY+C++DLL R G L +A LI MPV+
Sbjct: 532 LYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEP 591
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
N + W +LL A + HK A A +I ++P D A YVLLSN+HA G++ R
Sbjct: 592 NDVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMASVRN 651
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M R VKK G SW+E+ +Q+H+F +GD SHPR EI L+ L+ ++K GYVP++
Sbjct: 652 TMVARGVKKRRGSSWIEVADQIHEFNVGDNSHPRFQEIFAELQRLSPKIKEAGYVPESEE 711
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYI 400
+HD+ +EKE L+ HSEKLAIAF GLI P K+I
Sbjct: 712 VLHDVGEKEKELLLRLHSEKLAIAF-----GLIATAPGTTLRIFNTLRICHDCHSAVKFI 766
Query: 401 SEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
S I REIIVRD+SRFH FR+G+CSCGDYW
Sbjct: 767 SAIARREIIVRDSSRFHKFRDGQCSCGDYW 796
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/249 (35%), Positives = 136/249 (54%), Gaps = 6/249 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVI-RLMPIRNVIAWITLIAGKAQNGLAEDVLDQ 59
G +LD++ +SL MY K GSL + +++ R+ R+V +W +IA AQ+G E+ +
Sbjct: 152 GLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRL 211
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
Y M + P TF SV+S+CS L L QG++IHA + G LD+ + ++L++MY+R
Sbjct: 212 YEDMDV---EPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYAR 268
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
C CLDD+ K F DVV WS+MIAA+ +EAI + +M+ + N TF S+
Sbjct: 269 CKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASV 328
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L AC+ G G D ++ K L + T +VDL G LDEA +L + +
Sbjct: 329 LLACASVGDLRAGRAVHDQILGN-GYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRD 387
Query: 240 NAIIWKTLL 248
+W L+
Sbjct: 388 EG-LWTVLI 395
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 130/244 (53%), Gaps = 10/244 (4%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G+ + Y K GS+ + +N +W +++ AQNG LD Y M +
Sbjct: 61 GNEIVRAYGKCGSVASARVAFDAIARKNDYSWGSMLTAYAQNGHYRAALDLYKRMDL--- 117
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSRCGCLDDSV 127
+P+ + + +V+ +C+ + L +G+ IH+ + G LDV + +SL++MY++CG L+D+
Sbjct: 118 QPNPVVYTTVLGACASIEALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAK 177
Query: 128 KTFLECE-YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHC 186
+ F V W++MIAAY G EEAI L+E M + E + TF S+L ACS+
Sbjct: 178 RLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRLYEDM---DVEPSVRTFTSVLSACSNL 234
Query: 187 GLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKT 246
GL ++G + L+ + + L ++ + RC LD+AA + + +P + + + W
Sbjct: 235 GLLDQGRKIHALISSR-GTELDLSLQNALLTMYARCKCLDDAAKIFQRLP-RRDVVSWSA 292
Query: 247 LLSA 250
+++A
Sbjct: 293 MIAA 296
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 145/305 (47%), Gaps = 15/305 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G ELDL ++L MY + L + K+ + +P R+V++W +IA A+ L ++ ++ Y
Sbjct: 251 GTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFY 310
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M++ G RP+ TF SV+ +C+ + L G+ +H +++ G + + ++L+ +Y+
Sbjct: 311 SKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSY 370
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQ-KEFEANDVTFVSL 179
G LD++ F + E D LW+ +I Y G + L+ +M+ + A + + +
Sbjct: 371 GSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCV 430
Query: 180 LYACSHCGLKEKGMEFF-----DLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRN 234
+ AC+ G + D M+ + T +V++ R G L+ A +
Sbjct: 431 ISACASLGAFADARQAHSDIEADGMISDFVLA------TSLVNMYSRWGNLESARQVFDK 484
Query: 235 MPVKANAIIWKTLLSACKTHKSTDMA-GRIAE-EILGVNPQDAAPYVLLSNIHASAKRWQ 292
M + + + W TL++ H +A G E E+ G P + V+L + + Q
Sbjct: 485 MSSR-DTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQ 543
Query: 293 GVSEF 297
G F
Sbjct: 544 GKQLF 548
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 90/198 (45%), Gaps = 8/198 (4%)
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
+ + C +L ++ +QIH + + AS +V + + ++ Y +CG + + F
Sbjct: 30 YRDALRQCQDLESV---RQIH-DRISGAASANVFLGNEIVRAYGKCGSVASARVAFDAIA 85
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGME 194
+ W SM+ AY +G A++L+++M + + N V + ++L AC+ E+G
Sbjct: 86 RKNDYSWGSMLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIEALEEGKA 142
Query: 195 FFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
+ K + ++ + +CG L++A L M + + W +++A
Sbjct: 143 IHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQS 202
Query: 255 KSTDMAGRIAEEILGVNP 272
+ A R+ E+ + V P
Sbjct: 203 GHFEEAIRLYED-MDVEP 219
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1005
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 170/436 (38%), Positives = 259/436 (59%), Gaps = 14/436 (3%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G++L MY K+ L + E + + R++ AW ++AG AQ+G E + + M+ G
Sbjct: 570 GTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGV 629
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
+P++ T S +S CS +ATL G+Q+H+ +KAG S D+ V S+L+ MY++CGC++D+
Sbjct: 630 KPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEV 689
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F D V W+++I Y HG+G +A+ FE M + ++VTF+ +L ACSH GL
Sbjct: 690 VFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGL 749
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
E+G + F+ + K Y P +EHY C+VD+LGR G E + I M + +N +IW+T+L
Sbjct: 750 IEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVL 809
Query: 249 SACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKK 308
ACK H + + R A ++ + P+ + Y+LLSN+ A+ W V+ R M R VKK
Sbjct: 810 GACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKK 869
Query: 309 EPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEE 368
EPG SW+E+ QVH F D SHP+ EI L L++L ++ GY P+T +H++ E
Sbjct: 870 EPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKLMSVGYTPNTDHVLHNVSDRE 929
Query: 369 KEYNLKHHSEKLAIAFA---EHTRGLIVMLP-----------FKYISEIKNREIIVRDAS 414
K+ L +HSE+LA+AFA TR I + K ISEI N+E++VRD +
Sbjct: 930 KQELLFYHSERLALAFALLSTSTRKTIRIFKNLRICGDCHDFMKSISEITNQELVVRDIN 989
Query: 415 RFHHFRNGKCSCGDYW 430
FHHF+NG CSC ++W
Sbjct: 990 CFHHFKNGSCSCQNFW 1005
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 144/284 (50%), Gaps = 4/284 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE D ++L MYMK GS+ +G +V R++I+W L++G N + L +
Sbjct: 461 GFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIF 520
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
N M GF P+ TF+S++ SCS L+ + G+Q+HA++VK + V ++L+ MY++
Sbjct: 521 NQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKN 580
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
L+D+ F D+ W+ ++A Y G+GE+A+ F QM+++ + N+ T S L
Sbjct: 581 RFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSL 640
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
CS + G + + +K + + +VD+ +CG +++A + + V +
Sbjct: 641 SGCSRIATLDSGRQLHSMAIKAGQSGDMFVA-SALVDMYAKCGCVEDAEVVFDGL-VSRD 698
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLS 282
+ W T++ H A + E +L G P + +LS
Sbjct: 699 TVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLS 742
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 126/271 (46%), Gaps = 4/271 (1%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
DL GS+L +Y K G +V E+V MP +N ++W L+ G AQ G AE VL+ + M
Sbjct: 263 DLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMT 322
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
K T +V+ C+ L GQ +H+ ++ G LD + L+ MYS+CG
Sbjct: 323 GSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAG 382
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D++K F+ E DVV WS++I G+ EA +F++M N T SL+ A +
Sbjct: 383 DALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAAT 442
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
G G E V KY + +V + + G + + + + I W
Sbjct: 443 DLGDLYYG-ESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFE-ATTNRDLISW 500
Query: 245 KTLLSACKTHKSTDMAGRIAEEIL--GVNPQ 273
LLS +++ D RI ++L G NP
Sbjct: 501 NALLSGFHDNETCDTGLRIFNQMLAEGFNPN 531
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 119/242 (49%), Gaps = 6/242 (2%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+SL ++Y K GS KV +P R+V++W LI G G ++ + MR G
Sbjct: 167 NSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVE 226
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
++ T+ + + +CS L G+Q+HAE +K G D+ V S+L+ +Y++CG + + +
Sbjct: 227 ANEFTYATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERV 286
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
FL + V W++++ + G E+ +NLF +M E + T ++L C++ G
Sbjct: 287 FLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNL 346
Query: 190 EKGMEFFDLMVKKYRRKPRLEHY--TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTL 247
G L + R L+ + C+VD+ +CG +A + + + + W +
Sbjct: 347 RAGQIVHSLAI---RIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIE-DPDVVSWSAI 402
Query: 248 LS 249
++
Sbjct: 403 IT 404
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 120/250 (48%), Gaps = 2/250 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G ELD L MY K G + KV + +V++W +I Q G + + + +
Sbjct: 360 GCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVF 419
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
MR G P++ T S++S+ ++L L G+ IHA V K G D V ++L++MY +
Sbjct: 420 KRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKI 479
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + D + F D++ W+++++ + + + + +F QM + F N TF+S+L
Sbjct: 480 GSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISIL 539
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
+CS + G + +VK T +VD+ + +L++A + N +K +
Sbjct: 540 RSCSSLSDVDLGKQVHAQIVKNSLDGNDFVG-TALVDMYAKNRFLEDAETIF-NRLIKRD 597
Query: 241 AIIWKTLLSA 250
W +++
Sbjct: 598 LFAWTVIVAG 607
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 97/186 (52%), Gaps = 22/186 (11%)
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
+ ++ +C+ L +G+ IH +V+K+G + D + +SL+++Y++CG + + K F E
Sbjct: 131 YSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 190
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGME 194
DVV W+++I + G G A+NLF +M ++ EAN+ T+ + L ACS C E G +
Sbjct: 191 ERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQ 250
Query: 195 ----------FFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
F DL V + +VDL +CG + A + MP K NA+ W
Sbjct: 251 VHAEAIKVGDFSDLFVG-----------SALVDLYAKCGEMVLAERVFLCMP-KQNAVSW 298
Query: 245 KTLLSA 250
LL+
Sbjct: 299 NALLNG 304
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 95/185 (51%), Gaps = 10/185 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ S+L MY K G + + E V + R+ ++W T+I G +Q+G L + M
Sbjct: 667 DMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAML 726
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSRCGCL 123
G PD++TF+ V+S+CS + + +G++ + K G + + + ++ + R G
Sbjct: 727 DEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKF 786
Query: 124 DDSVKTFLE--CEYSDVVLWSSMIAAYGFHGKGE----EAINLFEQMEQKEFEANDVTFV 177
+ V++F+E S+V++W +++ A HG E A+ LFE + E ++N +
Sbjct: 787 HE-VESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFEL--EPEIDSNYILLS 843
Query: 178 SLLYA 182
++ A
Sbjct: 844 NMFAA 848
>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 678
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 168/410 (40%), Positives = 259/410 (63%), Gaps = 14/410 (3%)
Query: 35 RNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQI 94
+++++W +IA N + + +D + M PD I+ SV+ +C +L+ L G++I
Sbjct: 269 KSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRI 328
Query: 95 HAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKG 154
H VV+ ++ + ++LI MY++CGCL+ + + F + ++ DVV W+SMI+AYG +GKG
Sbjct: 329 HEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKG 388
Query: 155 EEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC 214
+A++LF +M+ + + FVS+L ACSH GL ++G +F LM ++ + PR+EH+ C
Sbjct: 389 RDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVC 448
Query: 215 VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQD 274
+VDLLGR G +DEA I+ MP++ N +W LLSAC+ + + + A+++ + P+
Sbjct: 449 MVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQ 508
Query: 275 AAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRS 334
+ YVLLSNI+A A RW+ V+ R M+ + +KK PGVS E+ N+VH F GD+SHP+S
Sbjct: 509 SGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQS 568
Query: 335 MEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFA--------- 385
+I L+ +MK GYVP+T + +HD++ E+KE +L HSEKLAIAFA
Sbjct: 569 KQIYEELDVSVGKMKEAGYVPETDSALHDVEEEDKECHLAVHSEKLAIAFAILNTAPGSP 628
Query: 386 -EHTRGLIVM----LPFKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
T+ L V + K IS+I REI +RD +RFHHF NG CSCGDYW
Sbjct: 629 IRITKNLRVCGDCHIAAKLISKIVGREITIRDTNRFHHFYNGVCSCGDYW 678
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 133/289 (46%), Gaps = 47/289 (16%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +L++ G+ L MY K G LVE +V+ MP R+V++W +L+AG A+NG +D L+
Sbjct: 167 GLDLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQFDDALEVC 226
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M ++G +PD T S++ + +
Sbjct: 227 KEMELLGLKPDAGTMASLLPAVTN------------------------------------ 250
Query: 121 GCLDDSV---KTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
CLD+ + F++ +V W+ MIA Y + EA+++F QME + + ++
Sbjct: 251 TCLDNVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIA 310
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
S+L AC G + +V+K R +P L ++D+ +CG L+ A + M
Sbjct: 311 SVLPACGDLSALLLGRRIHEYVVRK-RLQPNLLLENALIDMYAKCGCLEYAREVFDQMKF 369
Query: 238 KANAIIWKTLLSAC----KTHKSTDMAGRIAEEILGVNPQDAAPYVLLS 282
+ + + W +++SA K + + R+ + LG+NP A +LS
Sbjct: 370 R-DVVSWTSMISAYGMNGKGRDAVSLFSRMQD--LGLNPDSIAFVSVLS 415
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 139/313 (44%), Gaps = 18/313 (5%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G L Y G + +P +NV+ + +I N L D L + M G
Sbjct: 74 GIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGI 133
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
PD T+ V+ + S L G QIHA VV+ G L+V V + LISMY +CGCL ++ +
Sbjct: 134 DPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACR 193
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
+ DVV W+S++A +G+ ++A+ + ++ME + + T SLL A ++ L
Sbjct: 194 VLDQMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCL 253
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM---PVKANAIIWK 245
+ F M K K L + ++ + EA + M V +AI
Sbjct: 254 DN--VSFVKEMFMKLANK-SLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIA 310
Query: 246 TLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSN----IHASAKRWQGVSEFREAM 301
++L AC + + RI E ++ Q P +LL N ++A + E + M
Sbjct: 311 SVLPACGDLSALLLGRRIHEYVVRKRLQ---PNLLLENALIDMYAKCGCLEYAREVFDQM 367
Query: 302 RERNVKKEPGVSW 314
+ R+V VSW
Sbjct: 368 KFRDV-----VSW 375
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 51/91 (56%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
+ +L+ ++L MY K G L +V M R+V++W ++I+ NG D + ++
Sbjct: 337 LQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFS 396
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQ 92
M+ +G PD I FVSV+S+CS L +G+
Sbjct: 397 RMQDLGLNPDSIAFVSVLSACSHAGLLDEGR 427
>gi|357111691|ref|XP_003557645.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Brachypodium distachyon]
Length = 598
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 173/443 (39%), Positives = 259/443 (58%), Gaps = 27/443 (6%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPI--RNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVG 67
+SL H+Y G +V +P RN+++W +++ G A NG +VL + M V
Sbjct: 161 NSLVHLYGACGLFESAHRVFDEIPPPERNLVSWNSVLNGFAANGRPNEVLTVFREMLEVE 220
Query: 68 FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV 127
F PD T VSV+++C+E+ L G+++H V K G + ++LI +Y++CG +DD+
Sbjct: 221 FAPDGFTVVSVLTACAEIGVLALGRRVHVFVAKVGLVGNAHAGNALIDLYAKCGGVDDAR 280
Query: 128 KTFLECEYS-DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHC 186
K F E VV W+S+I +G G +A+ LF ME+++ ++T V +LYACSHC
Sbjct: 281 KMFGEMGVGRTVVSWTSLIVGLAVNGFGMDALQLFSMMEREKLMPTEITMVGVLYACSHC 340
Query: 187 GLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKT 246
GL + G +FD M +Y PR+EH C+VDLLGR G ++EA I MP++ NA++W+T
Sbjct: 341 GLVDDGFRYFDQMKAEYGITPRIEHLGCMVDLLGRAGRVEEAHNYITTMPLEPNAVVWRT 400
Query: 247 LLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNV 306
LL AC HK ++ ++ ++P + YVLLSN++A RW V R+ M V
Sbjct: 401 LLGACAMHKKLEIGEAAWARLVELDPGHSGDYVLLSNLYAGVGRWADVHVLRKTMVTHGV 460
Query: 307 KKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDS 366
+K PG S +E++N V++F MGD+SHP + +I L ++ ++ +GY+P T + D++
Sbjct: 461 RKNPGHSLVELRNSVYEFVMGDRSHPETDQIYEMLGDIAERLRRQGYIPHTSNVLADIED 520
Query: 367 EEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNRE 407
EEKE L +HSE+LAIAFA L+ LP K IS++ +RE
Sbjct: 521 EEKESALNYHSERLAIAFA-----LLKSLPGTPIRIVKNLRVCGDCHMAIKLISKVYDRE 575
Query: 408 IIVRDASRFHHFRNGKCSCGDYW 430
IIVRD SRFHHF+ G CSC DYW
Sbjct: 576 IIVRDRSRFHHFKGGACSCKDYW 598
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 3/181 (1%)
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
PD T+ ++ +C+ L L G+ +HAE K G V V +SL+ +Y CG + + +
Sbjct: 120 PDTHTYPPLLQACARLLALRYGEGLHAEACKNGLVSLVFVKNSLVHLYGACGLFESAHRV 179
Query: 130 FLECEYS--DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCG 187
F E ++V W+S++ + +G+ E + +F +M + EF + T VS+L AC+ G
Sbjct: 180 FDEIPPPERNLVSWNSVLNGFAANGRPNEVLTVFREMLEVEFAPDGFTVVSVLTACAEIG 239
Query: 188 LKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTL 247
+ G + V K ++DL +CG +D+A + M V + W +L
Sbjct: 240 VLALGRR-VHVFVAKVGLVGNAHAGNALIDLYAKCGGVDDARKMFGEMGVGRTVVSWTSL 298
Query: 248 L 248
+
Sbjct: 299 I 299
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 164/413 (39%), Positives = 249/413 (60%), Gaps = 14/413 (3%)
Query: 32 MPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQG 91
+ R+V+ W ++I+ AQ+G + + LD M + + +T VS + +CS+LA L QG
Sbjct: 317 LSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQG 376
Query: 92 QQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFH 151
++IH +++ G +++SLI MY RCG + S + F D+V W+ MI+ YG H
Sbjct: 377 KEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMH 436
Query: 152 GKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEH 211
G G +A+NLF+Q + N +TF +LL ACSH GL E+G ++F +M +Y P +E
Sbjct: 437 GFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQ 496
Query: 212 YTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVN 271
Y C+VDLL R G +E I MP + NA +W +LL AC+ H + D+A A + +
Sbjct: 497 YACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELE 556
Query: 272 PQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSH 331
PQ + YVL++NI+++A RW+ ++ R M+ER V K PG SW+E+K ++H F +GD SH
Sbjct: 557 PQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSH 616
Query: 332 PRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFA--EHTR 389
P +I +E L ++K GYVPDT + D+D +EKE++L HSEK+A+AF T
Sbjct: 617 PLMEQISAKMESLYFDIKEIGYVPDTNFVLQDVDEDEKEFSLCGHSEKIALAFGLISTTA 676
Query: 390 GLIVML------------PFKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
G + + K+IS+++ R+II+RD RFHHF +G CSCGDYW
Sbjct: 677 GTPLRIIKNLRVCGDCHSATKFISKVEKRDIIMRDNYRFHHFVDGVCSCGDYW 729
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 116/242 (47%), Gaps = 1/242 (0%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
GS L +Y ++G + + ++ M RNV +W ++ G E+ + + LM G
Sbjct: 48 GSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGV 107
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
RPD F V +CSEL G+ ++ ++ G + V S++ M+ +CG +D + +
Sbjct: 108 RPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARR 167
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F E E+ DV +W+ M++ Y G+ ++A+N+F +M + + N +T S + AC++ L
Sbjct: 168 FFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSL 227
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
G E +K L +VD +C + E A M + + + W +L
Sbjct: 228 LRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSV-EVARRKFGMIKQTDLVSWNAML 286
Query: 249 SA 250
+
Sbjct: 287 AV 288
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 151/364 (41%), Gaps = 62/364 (17%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE + S+ M++K G + + + ++V W +++G G + L+ +
Sbjct: 141 GFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVF 200
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGA-SLDVGVISSLISMYSR 119
M + G +P+ IT S +S+C+ L+ L G++IH +K D+ V +SL+ Y++
Sbjct: 201 RKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAK 260
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGF--HGKGEEAINLFE--------------- 162
C ++ + + F + +D+V W++M+A GF +G G+ A+ F+
Sbjct: 261 CRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFSELSTR 320
Query: 163 --------------------------QMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFF 196
+M E N VT VS L ACS +G E
Sbjct: 321 DVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIH 380
Query: 197 DLMVKKYRRKPRLEHYTC------VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
++ R TC ++D+ GRCG + ++ + MP + + + W ++S
Sbjct: 381 QFII-------RCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMP-QRDLVSWNVMISV 432
Query: 251 CKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKK 308
H A + ++ +G+ P LLS S +G F+ M +
Sbjct: 433 YGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFK--MMKTEYAM 490
Query: 309 EPGV 312
+P V
Sbjct: 491 DPAV 494
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 81/145 (55%), Gaps = 4/145 (2%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+SL MY + GS+ + ++ LMP R++++W +I+ +G D ++ + R +G +
Sbjct: 396 NSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLK 455
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV--ISSLISMYSRCGCLDDSV 127
P+ ITF +++S+CS + +G + + +++K ++D V + ++ + SR G ++++
Sbjct: 456 PNHITFTNLLSACSHSGLIEEGWK-YFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETL 514
Query: 128 KTFLECEY-SDVVLWSSMIAAYGFH 151
+ + + + +W S++ A H
Sbjct: 515 EFIEKMPFEPNAAVWGSLLGACRIH 539
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 14/212 (6%)
Query: 70 PDKIT--FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV 127
PD+ + S++ C +L L G Q+HA++V G + + S L+ +Y + GC++D+
Sbjct: 6 PDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDAR 65
Query: 128 KTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCG 187
+ F + +V W++++ Y G EE I LF M + + F + ACS
Sbjct: 66 RMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELK 125
Query: 188 LKEKGMEFFDLMVKKYRRKPRLEHYTCV----VDLLGRCGYLDEAAALIRNMPVKANAII 243
G + +D M+ E +CV +D+ +CG +D A + K + +
Sbjct: 126 NYRVGKDVYDYML-----SIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFK-DVFM 179
Query: 244 WKTLLSACKTHKSTDMAGRIAEEIL--GVNPQ 273
W ++S + A + +++ GV P
Sbjct: 180 WNIMVSGYTSKGEFKKALNVFRKMVLEGVKPN 211
>gi|356537880|ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Glycine max]
Length = 638
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 167/450 (37%), Positives = 270/450 (60%), Gaps = 25/450 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E ++V + + Y + G+L ++ M R+V++W +I+G AQNG ++ ++ +
Sbjct: 194 GREFNVVLCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYKEAIEIF 253
Query: 61 N-LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ +M+M P+++T VSV+ + S L L G+ +H K +D + S+L+ MY++
Sbjct: 254 HRMMQMGDVLPNRVTLVSVLPAISRLGVLELGKWVHLYAEKNKIRIDDVLGSALVDMYAK 313
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG ++ +++ F ++V+ W+++I HGK + N +ME+ +DVT++++
Sbjct: 314 CGSIEKAIQVFERLPQNNVITWNAVIGGLAMHGKANDIFNYLSRMEKCGISPSDVTYIAI 373
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L ACSH GL ++G FF+ MV KP++EHY C+VDLLGR GYL+EA LI NMP+K
Sbjct: 374 LSACSHAGLVDEGRSFFNDMVNSVGLKPKIEHYGCMVDLLGRAGYLEEAEELILNMPMKP 433
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
+ +IWK LL A K HK+ + R AE ++ + P D+ YV LSN++AS+ W GV+ R
Sbjct: 434 DDVIWKALLGASKMHKNIKIGMRAAEVLMQMAPHDSGAYVALSNMYASSGNWDGVAAVRL 493
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M++ +++K+PG SW+EI +H+F + D SH R+ +I LEE+++++ L G++PDT
Sbjct: 494 MMKDMDIRKDPGCSWIEIDGVIHEFLVEDDSHSRAKDIHSMLEEISNKLSLEGHMPDTTQ 553
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYI 400
+ MD + KE L +HSEK+A+AF GLI P K I
Sbjct: 554 VLLKMDEKHKESVLHYHSEKIAVAF-----GLISTPPKTPLCIVKNLRICEDCHSSMKLI 608
Query: 401 SEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
S++ R+I++RD RFHHF +G CSC DYW
Sbjct: 609 SKMYERKIVIRDRKRFHHFEHGSCSCMDYW 638
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 147/330 (44%), Gaps = 54/330 (16%)
Query: 32 MPIRNVIAWITLIAGKA--QNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLG 89
+P RN AW T+I A Q+ + +L ++ P++ TF SV+ +C+ +A L
Sbjct: 75 LPERNCFAWNTVIRALAETQDRHLDALLVFCQMLSEATVEPNQFTFPSVLKACAVMARLA 134
Query: 90 QGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS-------------VKTFLECEYS 136
+G+Q+H ++K G D V+++L+ MY CG ++D+ V+ + E
Sbjct: 135 EGKQVHGLLLKFGLVDDEFVVTNLLRMYVMCGSMEDANVLFYRNVEGVDDVRNLVRDERG 194
Query: 137 ----------------------------------DVVLWSSMIAAYGFHGKGEEAINLFE 162
VV W+ MI+ Y +G +EAI +F
Sbjct: 195 REFNVVLCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYKEAIEIFH 254
Query: 163 QMEQK-EFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGR 221
+M Q + N VT VS+L A S G+ E G ++ L +K + + + +VD+ +
Sbjct: 255 RMMQMGDVLPNRVTLVSVLPAISRLGVLELG-KWVHLYAEKNKIRIDDVLGSALVDMYAK 313
Query: 222 CGYLDEAAALIRNMPVKANAIIWKTLLSACKTH-KSTDMAGRIAE-EILGVNPQDAAPYV 279
CG +++A + +P + N I W ++ H K+ D+ ++ E G++P D
Sbjct: 314 CGSIEKAIQVFERLP-QNNVITWNAVIGGLAMHGKANDIFNYLSRMEKCGISPSDVTYIA 372
Query: 280 LLSNIHASAKRWQGVSEFREAMRERNVKKE 309
+LS + +G S F + + +K +
Sbjct: 373 ILSACSHAGLVDEGRSFFNDMVNSVGLKPK 402
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 170/444 (38%), Positives = 264/444 (59%), Gaps = 15/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G++ ++ ++ MY + L E + + +M +N ++W LIAG A+ G + +
Sbjct: 148 GYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLF 207
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M +P T+ SV+ +C+ + +L QG+ +HA ++K G L V ++L+ MY++
Sbjct: 208 SNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKS 267
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++D+ K F DVV W+SM+ Y HG G+ A+ FE+M + ND+TF+ +L
Sbjct: 268 GSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVL 327
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL ++G +FD+M KKY +P++ HY +VDLLGR G+LD A I MP+K
Sbjct: 328 TACSHAGLLDEGRHYFDMM-KKYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPT 386
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A +W LL AC+ HK+ ++ G AE I ++ +VLL NI+A A RW ++ R+
Sbjct: 387 AAVWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIYALAGRWNDAAKVRKM 446
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+E VKKEP SW+E++N+VH F D +HP+ EI E+++ ++K GYVPD+
Sbjct: 447 MKESGVKKEPACSWVEMENEVHVFVADDDAHPQRREIHNMWEQISDKIKEIGYVPDSSHV 506
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNR 406
+ MD +E+E L++HSEKLA+AFA G + + FK++S++ R
Sbjct: 507 LLCMDQQEREAKLQYHSEKLALAFALLNTPPGSTIRIKKNIRICGDCHSAFKFVSKLVER 566
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EIIVRD +RFHHF +G CSC DYW
Sbjct: 567 EIIVRDTNRFHHFCDGACSCEDYW 590
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 158/316 (50%), Gaps = 9/316 (2%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F DLV ++L ++Y K G LV K+ M R+V+ W LI G +Q+ +D L
Sbjct: 46 FRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRDVVTWTALITGYSQHDRPQDALLLLP 105
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLG--QGQQIHAEVVKAGASLDVGVISSLISMYSR 119
M +G +P++ T S++ + S + + QG+Q+H ++ G +V V +++ MY+R
Sbjct: 106 EMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYAR 165
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
C L+++ F + V W+++IA Y G+G++A LF M ++ + T+ S+
Sbjct: 166 CHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSSV 225
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L AC+ G E+G LM+K + T ++D+ + G +++A + + K
Sbjct: 226 LCACASMGSLEQGKWVHALMIKWGEKLVAFVGNT-LLDMYAKSGSIEDAKKVFDRL-AKR 283
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEF 297
+ + W ++L+ H +A + EE+L + P D +L+ + +G F
Sbjct: 284 DVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGLLDEGRHYF 343
Query: 298 REAMRERNVKKEPGVS 313
+ M++ NV EP +S
Sbjct: 344 -DMMKKYNV--EPQIS 356
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 77 SVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYS 136
+++ C+ L L +G+ IHA ++ + D+ + ++L+++Y++CG L + K F E
Sbjct: 20 TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSR 79
Query: 137 DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKE--KGME 194
DVV W+++I Y H + ++A+ L +M + + N T SLL A S G + +G +
Sbjct: 80 DVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQ 139
Query: 195 FFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
L + +Y + ++D+ RC +L+E A LI ++ V N + W L++
Sbjct: 140 LHGLCL-RYGYDSNVYVSCAILDMYARCHHLEE-AQLIFDVMVSKNEVSWNALIAG 193
>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
Length = 781
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 177/437 (40%), Positives = 265/437 (60%), Gaps = 16/437 (3%)
Query: 10 SSLAHMYMKSGSLVEGEKVI-RLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
++L Y KSG + E++ R+ R+ ++W ++I+G N L +D LM G
Sbjct: 345 NALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQ 404
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
R D TF +V+S+C+ +ATL G ++HA ++A DV + S+L+ MYS+CG +D + +
Sbjct: 405 RLDCFTFATVLSACATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASR 464
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F ++ W+SMI+ Y HG G+ A+ LF +M+ + +TFV +L ACSH GL
Sbjct: 465 FFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGL 524
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
++G E+F M + Y PR+EHY+C+VDLLGR G LD+ I MP+K N +IW+T+L
Sbjct: 525 VDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIENFINKMPIKPNILIWRTVL 584
Query: 249 SAC--KTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNV 306
AC + T++ R AE + ++PQ+A YVLLSN++AS +W+ ++ R AMRE V
Sbjct: 585 GACCRGNGRKTELGRRAAEMLFNMDPQNAVNYVLLSNMYASGGKWEDMARTRRAMREAAV 644
Query: 307 KKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDS 366
KKE G SW+ +K+ VH F GD SHP I L+EL +++ GYVP ++D++
Sbjct: 645 KKEAGCSWVTMKDGVHVFVAGDNSHPEKGLIYAKLKELDKKIRDAGYVPQIKFALYDLEP 704
Query: 367 EEKEYNLKHHSEKLAIAFA-EHTRGLIVML------------PFKYISEIKNREIIVRDA 413
E KE L +HSEKLA+AF GL + + FKYIS++ +R I++RD+
Sbjct: 705 ENKEELLSYHSEKLAVAFVLTRNSGLPIRIMKNLRVCGDCHSAFKYISKVVDRSIVLRDS 764
Query: 414 SRFHHFRNGKCSCGDYW 430
+RFHHF +GKCSC DYW
Sbjct: 765 NRFHHFEDGKCSCRDYW 781
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 118/246 (47%), Gaps = 2/246 (0%)
Query: 6 LVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRM 65
+ G+ L +MY K G + V LM ++ ++W ++I G QN ED + YN MR
Sbjct: 138 VAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRK 197
Query: 66 VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD 125
G P +S +SSC+ L + GQQ H E +K G +DV V ++L+++Y+ L +
Sbjct: 198 TGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAE 257
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKG-EEAINLFEQMEQKEFEANDVTFVSLLYACS 184
K F D V W+++I A G EAI +F +M + + N VTF++LL S
Sbjct: 258 CQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVS 317
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
+ + L++ KY K ++ G+ G ++ + M + + + W
Sbjct: 318 SLSTSKLSHQIHALIL-KYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSW 376
Query: 245 KTLLSA 250
+++S
Sbjct: 377 NSMISG 382
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 137/265 (51%), Gaps = 4/265 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLA-EDVLDQ 59
G ++D+ ++L +Y ++ L E +KV M R+ ++W T+I A +G + + ++
Sbjct: 234 GLDMDVSVSNTLLALYAETSRLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEV 293
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ M G+ P+++TF++++++ S L+T QIHA ++K D + ++L++ Y +
Sbjct: 294 FLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGK 353
Query: 120 CGCLDDSVKTFLE-CEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
G +++ + F E D V W+SMI+ Y + +A++L M Q+ + TF +
Sbjct: 354 SGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFAT 413
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+L AC+ E GME ++ + + +VD+ +CG +D A+ MPV+
Sbjct: 414 VLSACATVATLECGMEVHACAIRACLESDVVIG-SALVDMYSKCGRIDYASRFFNLMPVR 472
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRI 263
N W +++S H D A R+
Sbjct: 473 -NLYSWNSMISGYARHGHGDNALRL 496
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 96/189 (50%), Gaps = 2/189 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ DL ++L ++Y++ G V K+ MP RN + W LI+G QNG+ ED
Sbjct: 30 GFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMPEDACGVL 89
Query: 61 NLMRMVGFRPDKITFVSVISSCSE-LATLGQGQQIHAEVVKAGAS-LDVGVISSLISMYS 118
M GF P++ F S I +C E + +G+Q+H ++ G + V V + LI+MY+
Sbjct: 90 KEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGNGLINMYA 149
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+CG +D + F D V W+SMI + E+A+ + M + ++ +S
Sbjct: 150 KCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFALIS 209
Query: 179 LLYACSHCG 187
L +C+ G
Sbjct: 210 ALSSCASLG 218
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
E D+V GS+L MY K G + + LMP+RN+ +W ++I+G A++G ++ L +
Sbjct: 439 LESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFT 498
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSRC 120
M++ G PD ITFV V+S+CS + + +G + + + G V S ++ + R
Sbjct: 499 RMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRA 558
Query: 121 GCLDDSVKTFLECE--YSDVVLWSSMIAA 147
G L D ++ F+ ++++W +++ A
Sbjct: 559 GEL-DKIENFINKMPIKPNILIWRTVLGA 586
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 79/163 (48%), Gaps = 2/163 (1%)
Query: 94 IHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGK 153
H V+K G D+ + ++LI++Y R G + K F E + V W+ +I+ Y +G
Sbjct: 22 FHLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGM 81
Query: 154 GEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL-KEKGMEFFDLMVKKYRRKPRLEHY 212
E+A + ++M + F N F S + AC L + KG + ++ ++
Sbjct: 82 PEDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVG 141
Query: 213 TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK 255
++++ +CG +D A ++ + V +++ W ++++ +K
Sbjct: 142 NGLINMYAKCGDIDHARSVF-GLMVDKDSVSWNSMITGLDQNK 183
>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 837
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 170/449 (37%), Positives = 261/449 (58%), Gaps = 24/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E DL G++L Y K + K+ + N ++W T++ G +Q+GL E+ L +
Sbjct: 394 GHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVF 453
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ ++T+ SV+ +C+ A++ QIH + K+ + D + +SLI Y++C
Sbjct: 454 CEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKC 513
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + D++K F D++ W+++I+ Y HG+ +A+ LF++M + E+ND+TFV+LL
Sbjct: 514 GYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALL 573
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
CS GL G+ FD M + KP +EHYTC+V LLGR G L++A I ++P +
Sbjct: 574 SVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPS 633
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A++W+ LLS+C HK+ + AE+IL + PQD YVLLSN++A+A V+ R++
Sbjct: 634 AMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKS 693
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
MR V+K PG+SW+EIK ++H F++G HP I+ LE L + GY+PD
Sbjct: 694 MRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVINAMLEWLNLKTSREGYIPDINVV 753
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
+HD+D E+K L HSE+LA+A+ GL++ P F IS
Sbjct: 754 LHDVDKEQKTRMLWVHSERLALAY-----GLVMTPPGHPIRILKNLRSCLDCHTAFTVIS 808
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+I REIIVRD +RFHHF +GKCSCGDYW
Sbjct: 809 KIVKREIIVRDINRFHHFEDGKCSCGDYW 837
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 142/297 (47%), Gaps = 7/297 (2%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G +L MY K G + + ++P +VI +I+ AQ+ E + + +
Sbjct: 301 GGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSV 360
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
P++ + SV+ +C+ + L G+QIH +K G D+ V ++L+ Y++C +D S+K
Sbjct: 361 LPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLK 420
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC-SHCG 187
F ++ V W++++ + G GEEA+++F +M+ + VT+ S+L AC S
Sbjct: 421 IFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTAS 480
Query: 188 LKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTL 247
++ G + + + + ++D +CGY+ +A + +++ ++ + I W +
Sbjct: 481 IRHAGQIHCSIEKSTFNNDTVIGN--SLIDTYAKCGYIRDALKVFQHL-MERDIISWNAI 537
Query: 248 LSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMR 302
+S H A + + + V D LLS ++ G+S F ++MR
Sbjct: 538 ISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLF-DSMR 593
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 116/248 (46%), Gaps = 2/248 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + + GS L Y + + E V + ++ + W +++ ++N E+ +
Sbjct: 192 GHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVF 251
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ MR+ G +P+ SV+ + L ++ G+ IH +K + V +L+ MY++C
Sbjct: 252 SKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKC 311
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + D+ F Y DV+L S MI+ Y + E+A LF ++ + N+ + S+L
Sbjct: 312 GDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVL 371
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC++ + G + + + K + L ++D +C +D + + ++ AN
Sbjct: 372 QACTNMVQLDFGKQIHNHAI-KIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLR-DAN 429
Query: 241 AIIWKTLL 248
+ W T++
Sbjct: 430 EVSWNTIV 437
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 80/180 (44%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
LDL + L +MY K G L ++ MP RN+++++TL+ AQ G E +
Sbjct: 93 RLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRR 152
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
+R G ++ +++ + G +H+ K G + V S LI YS C
Sbjct: 153 LRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSL 212
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
+ D+ F D V+W++M++ Y + E A +F +M + N S+L A
Sbjct: 213 VSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKA 272
>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 177/445 (39%), Positives = 266/445 (59%), Gaps = 24/445 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D V+ +S+ ++Y+++G + + KV M R++I W T+IA + L + MR
Sbjct: 287 DSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMR 346
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G PD T +S++ CS LA QG++IH + K G DV V + LI MYS+CG L
Sbjct: 347 TEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLR 406
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+S + F + DVV W+++I+A G +G+G++A+ F +ME + V FV++++ACS
Sbjct: 407 NSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACS 466
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL E+G+ +F M K Y+ +PR+EHY CVVDLL R LD+A I +MP+K ++ IW
Sbjct: 467 HSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIW 526
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
LLSAC+ T++A R++E I+ +NP D YVL+SNI+A+ +W V R++++ R
Sbjct: 527 GALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKAR 586
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
+KK+PG SW+EI+N+V+ F G K + E++ L L M GY+ + +HD+
Sbjct: 587 GLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGLMAKEGYIANLQFVLHDI 646
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKN 405
D +EK L HSE+LAIAF GL+ P KYIS+I
Sbjct: 647 DEDEKRDILCGHSERLAIAF-----GLLNTKPGTPLQVMKNLRVCEDCHTVTKYISKIVQ 701
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
RE++VRDA+RFH F++G CSCGDYW
Sbjct: 702 RELLVRDANRFHVFKDGACSCGDYW 726
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 157/351 (44%), Gaps = 43/351 (12%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF DL G++L MY + L + KV MP+R+V++W +LI+G NG + L+ Y
Sbjct: 145 GFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIY 204
Query: 61 N-----LMRMVG-FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLI 114
M MV F+PD +T S++ +C L L G+ +H ++ +G D + LI
Sbjct: 205 YQSIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILI 264
Query: 115 SMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEF----- 169
+MY++CG L S + F + D V W+SMI Y +GK +++ +FE M+ ++
Sbjct: 265 NMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNT 324
Query: 170 --------------------------EANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKY 203
+ T +S+L CS K +G E + K
Sbjct: 325 IIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIF-KL 383
Query: 204 RRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRI 263
+ + ++++ +CG L + + + M K + + W L+SAC + A R
Sbjct: 384 GLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTK-DVVTWTALISACGMYGEGKKAVRA 442
Query: 264 AEEI--LGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGV 312
E+ G+ P A ++ S +G++ F +++ K EP +
Sbjct: 443 FGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRM--KKDYKIEPRI 491
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 114/236 (48%), Gaps = 23/236 (9%)
Query: 28 VIRLM-PIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELA 86
V RL P NV W ++I NGL + L Y+ + + +PD TF SVI++C+ L
Sbjct: 70 VFRLASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLL 129
Query: 87 TLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIA 146
+ IH V+ G D+ + ++LI MY R LD + K F E DVV W+S+I+
Sbjct: 130 DFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLIS 189
Query: 147 AYGFHGKGEEAINLFEQ-----MEQ-KEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMV 200
Y +G EA+ ++ Q ME +F+ + +T S+L AC H G E G D M+
Sbjct: 190 GYNANGYWNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMI 249
Query: 201 KKYRRKPRLEHYTC-------VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
Y C ++++ +CG L + + M K +++ W ++++
Sbjct: 250 T--------SGYECDTTASNILINMYAKCGNLLASQEVFSGMKCK-DSVSWNSMIN 296
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 86/188 (45%), Gaps = 9/188 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E D+ G+ L MY K GSL +V +LM ++V+ W LI+ G + + +
Sbjct: 384 GLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAF 443
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV--ISSLISMYS 118
M G PD + FV++I +CS + +G + +K ++ + + ++ + S
Sbjct: 444 GEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLN-YFHRMKKDYKIEPRIEHYACVVDLLS 502
Query: 119 RCGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF- 176
R LD + L D +W ++++A G E A + E++ E +D +
Sbjct: 503 RSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERI--IELNPDDTGYY 560
Query: 177 --VSLLYA 182
VS +YA
Sbjct: 561 VLVSNIYA 568
>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 175/445 (39%), Positives = 269/445 (60%), Gaps = 16/445 (3%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
+E + GSSL MY K+G + E V +P R+V++ +I+G AQ GL E+ L+ +
Sbjct: 142 YENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEALELFC 201
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
++ G + +T+ S++++ S LA L G+Q+H+ V++ V + +SLI MYS+CG
Sbjct: 202 RLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNSLIDMYSKCG 261
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM-EQKEFEANDVTFVSLL 180
L+ + K F V+ W++M+ Y HGKG E + LF+ M E+ + + + VTF+++L
Sbjct: 262 NLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPDSVTFLAVL 321
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRR-KPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
CSH GL++KG+E FD M+ + +EHY CV+DLLGR G ++EA LI+ MP +
Sbjct: 322 SGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFELIKKMPFEP 381
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
A IW +LL AC+ H +T++ + +L + P++A YV+LSN++ASA RW+ V RE
Sbjct: 382 TAAIWGSLLGACRVHSNTNIGEFVGCRLLEIEPENAGNYVILSNLYASAGRWEDVRNVRE 441
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M E+ V KEPG SW+E+ +H F D+SHPR E+ L + EL + K GYVPD
Sbjct: 442 LMMEKAVIKEPGRSWIELDQTIHTFYASDRSHPRREEVFLKVRELLVKFKESGYVPDQSC 501
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFA-------------EHTRGLIVMLPF-KYISEIKN 405
++D+D E+KE L HSEKLA+AF ++ R + F K++S++
Sbjct: 502 VLYDVDEEQKEKILLGHSEKLALAFGLISTSEGVPLRVIKNLRICVDCHNFAKFVSKVYG 561
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
R++ +RD +RFHH G CSCGDYW
Sbjct: 562 RQVSIRDKNRFHHVAGGICSCGDYW 586
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 139/299 (46%), Gaps = 13/299 (4%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+ L +Y K L V M RNV++W +I+G +Q G A + L + M
Sbjct: 49 TRLIILYTKCECLGCARHVFDEMRERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTE 108
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P++ TF +V+SSC+ + G+QIH+ + K + V SSL+ MY++ G + ++
Sbjct: 109 PNEFTFATVLSSCTGFSGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGV 168
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F DVV +++I+ Y G EEA+ LF +++++ +N VT+ SLL A S
Sbjct: 169 FECLPERDVVSCTAIISGYAQLGLDEEALELFCRLQREGMSSNYVTYASLLTALSGLAAL 228
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTC----VVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
+ G + V + + L Y ++D+ +CG L+ A + NMPV+ I W
Sbjct: 229 DHGKQ-----VHSHVLRCELPFYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRT-VISWN 282
Query: 246 TLLSACKTH-KSTDMAG--RIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
+L H K ++ ++ E V P +LS +G+ F E M
Sbjct: 283 AMLVGYSKHGKGIEVVKLFKLMREENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMM 341
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 87/170 (51%), Gaps = 5/170 (2%)
Query: 78 VISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSD 137
+++ C + +GQ++HA ++K V + + LI +Y++C CL + F E +
Sbjct: 16 LLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMRERN 75
Query: 138 VVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFD 197
VV W++MI+ Y G EA++LF QM + + E N+ TF ++L +C+ E G +
Sbjct: 76 VVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHS 135
Query: 198 LMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP----VKANAII 243
+ K+ + + + ++D+ + G + EA + +P V AII
Sbjct: 136 HIFKR-NYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAII 184
>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 185/451 (41%), Positives = 258/451 (57%), Gaps = 29/451 (6%)
Query: 1 GFELDLVAGSSLAHMYMK-SGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQ 59
G+E DLV G+ L +MY K S SL E +V M R+VI W LI Q G A+D LD
Sbjct: 294 GYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDI 353
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ M++ P++IT +V+S+C+ L QG+ +HA + DV + +SL++MY+R
Sbjct: 354 FKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNR 413
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG LDD+V F +V WS++IAAY HG + F ++ Q+ A+DVT VS
Sbjct: 414 CGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVST 473
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L ACSH G+ ++G++ F MV + P H+ C+VDLL R G L+ A LI +MP
Sbjct: 474 LSACSHGGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLP 533
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYV-LLSNIHASAKRWQGVSEFR 298
+A+ W +LLS CK H T A R+A+++ + +D V LLSN++A A RW V R
Sbjct: 534 DAVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDV---R 590
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
+ R +K PG S++EI + VH+F GDKSHP I ++ L+ +MK GYVPD
Sbjct: 591 KTRNRRAARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAGYVPDMR 650
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKY 399
+H++ EEKE L +HSEKLAIA+ GLI P K+
Sbjct: 651 MVLHNVKEEEKEQMLCYHSEKLAIAY-----GLISTPPGTPLHIVKNLRACVDCHAAAKF 705
Query: 400 ISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
IS I R+I+VRD++RFHHF NG CSC DYW
Sbjct: 706 ISRIVGRKIVVRDSTRFHHFENGSCSCKDYW 736
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 143/255 (56%), Gaps = 3/255 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ D + ++L +MY K GSL KV + R+VIAW T+I+G A+ G A L+ +
Sbjct: 193 GYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELF 252
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M +P+ +TF+ ++++C+ L L QG+ IH +V + G D+ + + L++MY++C
Sbjct: 253 QRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMYTKC 312
Query: 121 -GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
L+++ + F DV+ W+ +I AY +G+ ++A+++F+QM+ + N++T ++
Sbjct: 313 SSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNV 372
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L AC+ G K +G L+ R K + ++++ RCG LD+ + + K+
Sbjct: 373 LSACAVLGAKRQGKAVHALIASG-RCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKS 431
Query: 240 NAIIWKTLLSACKTH 254
+ W TL++A H
Sbjct: 432 -LVSWSTLIAAYAQH 445
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 132/260 (50%), Gaps = 20/260 (7%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
E D++ G++L MY + L K M + ++ W LIAG ++NG L Y
Sbjct: 90 LEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQ 149
Query: 62 LM---RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
M G +PD ITF S + +C+ + + QG++I A V +G + D V ++LI+MYS
Sbjct: 150 DMVSKSPEGMKPDAITFSSALYACTVVGDISQGREIEARTVASGYASDSIVQNALINMYS 209
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+CG L+ + K F + DV+ W++MI+ Y G +A+ LF++M + + N VTF+
Sbjct: 210 KCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIG 269
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY-------TCVVDLLGRC-GYLDEAAA 230
LL AC++ E+G + RK R + Y ++++ +C L+EA
Sbjct: 270 LLTACTNLEDLEQG--------RAIHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQ 321
Query: 231 LIRNMPVKANAIIWKTLLSA 250
+ M + + I W L+ A
Sbjct: 322 VFERMRTR-DVITWNILIVA 340
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 132/271 (48%), Gaps = 11/271 (4%)
Query: 15 MYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKIT 74
MY K GS+ + V + N ++W ++A A+NG + L Y M + G RPD
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAG-ASLDVGVISSLISMYSRCGCLDDSVKTFLEC 133
FV I CS L QGQ +HA +++ D+ + ++LI+MY+RC L+ + KTF E
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 134 EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEA---NDVTFVSLLYACSHCGLKE 190
+V W+++IA Y +G A+ +++ M K E + +TF S LYAC+ G
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDIS 180
Query: 191 KGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
+G E V Y +++ ++++ +CG L+ A + + + + I W T++S
Sbjct: 181 QGREIEARTVASGYASDSIVQN--ALINMYSKCGSLESARKVFDRLKNR-DVIAWNTMIS 237
Query: 250 ACKTHKSTDMAGRIAEEILGVNPQDAAPYVL 280
+ A + + + P D P V+
Sbjct: 238 GYAKQGAATQALELFQRM---GPNDPKPNVV 265
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 169/447 (37%), Positives = 260/447 (58%), Gaps = 24/447 (5%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E LV+ +++ Y K G L + M R+ + W +I G QNG+ + L +
Sbjct: 187 EKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRR 246
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M +P+++T +SV+S+C +L L G+ +H+ + G +V V ++L+ MYS+CG
Sbjct: 247 MLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGS 306
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
L+D+ F + + DVV W+SMI Y HG +EA+ LF+ M + ++TF+ +L A
Sbjct: 307 LEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSA 366
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
C H G +G + F+ M +Y +P++EHY C+V+LLGR G++++A L++NM ++ + +
Sbjct: 367 CGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPV 426
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMR 302
+W TLL AC+ H + +I E ++ N ++ Y+LLSNI+A+ W GV+ R M+
Sbjct: 427 LWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMK 486
Query: 303 ERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMH 362
+ VKKEPG S +E+ N+VH+F G +HP+ EI + LEE+ +K GY P T +H
Sbjct: 487 DSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVLH 546
Query: 363 DMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEI 403
D+ EKE +L+ HSEKLAIAF GLI P K IS+I
Sbjct: 547 DIGETEKERSLEVHSEKLAIAF-----GLINTQPGTTIKIVKNLRVCADCHEVTKLISKI 601
Query: 404 KNREIIVRDASRFHHFRNGKCSCGDYW 430
R+I+VRD +RFHHF NG CSCGDYW
Sbjct: 602 TGRKIVVRDRNRFHHFVNGSCSCGDYW 628
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 135/310 (43%), Gaps = 41/310 (13%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
+V W +I G A GL E L+ Y M G P+ TF S++ C + G+ +H
Sbjct: 92 SVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLCP----IEPGKALH 147
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTF--------------LEC-------- 133
++ VK G D+ V + L+ +Y+R G + + + F L C
Sbjct: 148 SQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELD 207
Query: 134 ---------EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
E D V W+ MI Y +G EA+ LF +M + + + N+VT +S+L AC
Sbjct: 208 AARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACG 267
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
G E G + ++ + + T +VD+ +CG L++A + + K + + W
Sbjct: 268 QLGALESG-RWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDK-DVVAW 325
Query: 245 KTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMR 302
+++ H + A ++ + + +G++P + +LS S +G F +
Sbjct: 326 NSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKD 385
Query: 303 ERNVKKEPGV 312
E + EP +
Sbjct: 386 EYGI--EPKI 393
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 92/187 (49%), Gaps = 7/187 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + ++ G++L MY K GSL + V + ++V+AW ++I G A +G +++ L +
Sbjct: 286 GIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLF 345
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVV-KAGASLDVGVISSLISMYSR 119
M +G P ITF+ ++S+C + +G I ++ + G + ++++ R
Sbjct: 346 KSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGR 405
Query: 120 CGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGK---GEEAINLFEQMEQKEFEANDVT 175
G ++ + + D VLW +++ A HGK GE+ + L ++Q +
Sbjct: 406 AGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELL--VDQNLANSGTYI 463
Query: 176 FVSLLYA 182
+S +YA
Sbjct: 464 LLSNIYA 470
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 71/174 (40%), Gaps = 6/174 (3%)
Query: 87 TLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIA 146
T+ QIHA + + G + L Y+ G LD SV F + V W+++I
Sbjct: 42 TISHLLQIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIH 101
Query: 147 AYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRK 206
+ G E+A+N + QM + E N TF S+L C E G V K
Sbjct: 102 GHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLCP----IEPGKALHSQAV-KLGFD 156
Query: 207 PRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMA 260
L T ++D+ R G + A L MP K+ + +L+ H D A
Sbjct: 157 SDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKS-LVSLTAMLTCYAKHGELDAA 209
>gi|125547694|gb|EAY93516.1| hypothetical protein OsI_15309 [Oryza sativa Indica Group]
Length = 613
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 181/441 (41%), Positives = 261/441 (59%), Gaps = 15/441 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM- 63
D V +++ YM G++V+ K MP+RN+++W ++AG +N A+D L + M
Sbjct: 173 DAVLWTAMVSGYMDIGNVVKAIKYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMV 232
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
R +P+ T SV+ CS L+ LG G+QIH +K S ++ V +SL+SMY +CG L
Sbjct: 233 REANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLLLSRNLTVGTSLVSMYCKCGDL 292
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
+ F E DVV W++MI+ Y HG G+EAINLFE+M+ + E N +TFV +L AC
Sbjct: 293 SSACILFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVVVLTAC 352
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
H GL + G++ F+ M + Y +PR++HY+C+VDLL R G L+ A IR+MP + +
Sbjct: 353 IHTGLCDFGIQCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDFIRSMPFEPHPSA 412
Query: 244 WKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
+ TLL+AC+ +K+ + A A +++ +PQ A YV L+NI+A A +W VS R M++
Sbjct: 413 YGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYAVANQWDDVSRVRRWMKD 472
Query: 304 RNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHD 363
V K PG SW+EIK +H+F D+ HP+ I L +L MK GYVPD +HD
Sbjct: 473 NTVVKTPGYSWIEIKGVLHEFRSNDRLHPQLYLIHEKLGQLAERMKEMGYVPDLDFVLHD 532
Query: 364 MDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNREII 409
+D K L HSEKLAIAF G+ + + K IS I++REII
Sbjct: 533 VDETMKVQMLMRHSEKLAIAFGLISTAHGMTLRIFKNLRVCGDCHNAAKVISMIEDREII 592
Query: 410 VRDASRFHHFRNGKCSCGDYW 430
+RD +RFHHFR G CSC DYW
Sbjct: 593 LRDTTRFHHFRGGHCSCDDYW 613
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 127/283 (44%), Gaps = 16/283 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+V+ ++L + SG ++ MP+R+V +W T+++G +++G E+ + M
Sbjct: 79 DVVSYNTLLLCHFASGDADGARRLFASMPVRDVASWNTMVSGLSKSGAVEEAKVVFLAMP 138
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+ + +++ +++S A G A D + ++++S Y G +
Sbjct: 139 V----RNSVSWNAMVSG---FACSGDMSTAEEWFRNAPEKEDAVLWTAMVSGYMDIGNVV 191
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM-EQKEFEANDVTFVSLLYAC 183
++K F ++V W++++A Y + ++A+ LF M + + N T S+L C
Sbjct: 192 KAIKYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGC 251
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
S+ G + +K + L T +V + +CG L A L M + + +
Sbjct: 252 SNLSALGFGKQIHQWCMKLLLSR-NLTVGTSLVSMYCKCGDLSSACILFGEMHTR-DVVA 309
Query: 244 WKTLLSACKTH----KSTDMAGRIAEEILGVNPQDAAPYVLLS 282
W ++S H ++ ++ R+ +E GV P V+L+
Sbjct: 310 WNAMISGYAQHGDGKEAINLFERMKDE--GVEPNWITFVVVLT 350
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 164/450 (36%), Positives = 269/450 (59%), Gaps = 25/450 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + +L +++ MY K + ++V + ++V++W ++++G A++G ++ L +
Sbjct: 243 GLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALF 302
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M++ D+IT V V+S+C++ L QG+ IH + K + D+ + ++L+ MY++C
Sbjct: 303 QKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKC 362
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +D +++ F +V W+++I HG GE+AI+LF+QME + +DVTF++LL
Sbjct: 363 GSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALL 422
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL ++G+ F M K++ +PR+EHY CVVDLL R +D+A A I NMP+KAN
Sbjct: 423 CACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKAN 482
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+++W TLL AC++ D+A +I ++ + P YV+LSN++A +W + R+
Sbjct: 483 SVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQ 542
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLR-GYVPDTGA 359
M+ + ++K PG SW+E+ +HQF GD+SH ++ +I +EE+T + L G+VP T
Sbjct: 543 MKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLDGGHVPGTAN 602
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYI 400
+ D++ EEKE++L HSEKLAIA GLI K
Sbjct: 603 VLFDIEEEEKEHSLFLHSEKLAIAL-----GLISTPSGSPIRIVKNLRVCNDCHSFLKVT 657
Query: 401 SEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
S++ NREI+ RD SRFHHF+ G CSC D+W
Sbjct: 658 SKVYNREIVARDRSRFHHFKEGSCSCMDFW 687
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 155/307 (50%), Gaps = 6/307 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF DL ++L Y GS V +R+V+ W +I GL+E D
Sbjct: 141 GFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLL 200
Query: 61 NLM-RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ M ++ RPD++T VS++ +C++L L +G+ +H+ + G ++ V ++++ MY +
Sbjct: 201 DEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCK 260
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
C ++ + + F DV+ W+SM++ G +EA+ LF++M+ + E +++T V +
Sbjct: 261 CDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGV 320
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L AC+ G ++G ++ L++ K+ L T +VD+ +CG +D A + R M V+
Sbjct: 321 LSACAQTGALDQG-KYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVR- 378
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEF 297
N W L+ H + A + +++ + P D LL + +G++ F
Sbjct: 379 NVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMF 438
Query: 298 REAMRER 304
+AM+ +
Sbjct: 439 -QAMKNK 444
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 120/250 (48%), Gaps = 7/250 (2%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F L++ +L+H SG L K+ M + T+I G A++ + + Y
Sbjct: 45 FSSKLISFLALSH----SGDLNYARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYY 100
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M G D T+ V+++C+ L + G++ H EV+K G D+ VI++LI Y CG
Sbjct: 101 FMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCG 160
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQ-KEFEANDVTFVSLL 180
+ F E DVV W+ MI A+ G E+A +L ++M + ++VT VSL+
Sbjct: 161 SFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLV 220
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+ G E+G +F K+ L ++D+ +C + E+A + N + +
Sbjct: 221 PACAQLGNLERG-KFLHSYSKELGLDENLRVNNAILDMYCKCDDI-ESAQEVFNRIREKD 278
Query: 241 AIIWKTLLSA 250
+ W ++LS
Sbjct: 279 VLSWTSMLSG 288
>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 165/444 (37%), Positives = 264/444 (59%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + D V S+L+ MY K GS+ E + M R+++ W +I Q+G ++ D +
Sbjct: 233 GLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLF 292
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ G RP++ TF V+++C+ + G+++H + + G S+L+ MYS+C
Sbjct: 293 ADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKC 352
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + + F E D+ W+S+IA Y +G+ +EAI FE + + + + +TFV +L
Sbjct: 353 GNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVL 412
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+H GL +KG+++F + ++Y +HY C++DLL R G DEA +I M +K +
Sbjct: 413 SACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMKPD 472
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+W +LL C+ H + +A R AE + + P++ A YV L+NI+A+A W V++ R+
Sbjct: 473 KFLWASLLGGCRIHGNLKLAQRAAEALFEIEPENPATYVTLANIYATAGMWSEVAKIRKT 532
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M +R V K+PG+SW+ IK VH F +GD SHP+S EI+ +L +L+ MK G+VPDT
Sbjct: 533 MDDRGVVKKPGLSWIAIKRDVHVFLVGDDSHPKSKEINEFLGKLSKRMKEEGFVPDTNFV 592
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA-------------EHTRGLI-VMLPFKYISEIKNR 406
+HD++ E+KE NL +HSEKLA+AF ++ R + K+IS+I NR
Sbjct: 593 LHDVEDEQKEQNLSYHSEKLAVAFGIISTPEGTPIKVFKNLRTCVDCHTAIKFISKITNR 652
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
+IIVRD++RFH F +G CSC DYW
Sbjct: 653 KIIVRDSNRFHFFEDGHCSCRDYW 676
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 131/273 (47%), Gaps = 5/273 (1%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E DL + + L Y K G L E + + MP R+ +W +I+G ++ + L+ + +
Sbjct: 133 ERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEALELFRM 192
Query: 63 M-RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M R + +K T S +++ + + L G++IH +++ G D V S+L MY +CG
Sbjct: 193 MKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCG 252
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
++++ F + D+V W++MI Y G+ +E +LF + + N+ TF +L
Sbjct: 253 SIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLN 312
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
AC++ +E G + M + P + +V + +CG + A + + P + +
Sbjct: 313 ACANQTSEELGKKVHGYMT-RVGFDPFSFAASALVHMYSKCGNMVSAERVFKETP-QPDL 370
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEIL--GVNP 272
W +L++ + D A R E ++ G P
Sbjct: 371 FSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQP 403
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 95/215 (44%), Gaps = 40/215 (18%)
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
+P + ++I SC + L QG+++H + +G + +++ L+ MY++C L DS K
Sbjct: 67 KPSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQK 126
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F E D+ W+ +I+ Y G +EA +LF++M +++ + ++ +++
Sbjct: 127 LFDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMPERD----NFSWTAMISGYVRHDR 182
Query: 189 KEKGMEFFDLM-------------------------------VKKYRRKPRLEH----YT 213
+ +E F +M + Y + L+ ++
Sbjct: 183 PNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWS 242
Query: 214 CVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
+ D+ G+CG ++EA + M V + + W ++
Sbjct: 243 ALSDMYGKCGSIEEARHIFDKM-VDRDIVTWTAMI 276
>gi|414884091|tpg|DAA60105.1| TPA: hypothetical protein ZEAMMB73_697281 [Zea mays]
Length = 734
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 170/446 (38%), Positives = 255/446 (57%), Gaps = 17/446 (3%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRL---MPIRNVIAWITLIAGKAQNGLAEDVLD 58
E D G SL MY K G + + AW T++AG QNG E+ L+
Sbjct: 289 LEEDAFVGCSLMDMYCKCGEMESALSIFDRWSDFTEDRQFAWSTMVAGYVQNGREEEALE 348
Query: 59 QYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
+ M G + SV S+C+ + QG+Q+H V K G D + S+++ MYS
Sbjct: 349 FFRRMLREGVPAGQFILTSVASACANAGMVEQGRQVHGFVEKLGHRFDAPLASAIVDMYS 408
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+ G L+D+ + F + +V LW++M+ +Y HG+G A+ +F +M+ ++ N++T V+
Sbjct: 409 KSGSLEDACRIFRSAQTKNVALWTTMLCSYASHGQGRMALEIFSRMKAEKIMPNEITLVA 468
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+L ACSH GL G +F+LM ++Y P EHY C+VDL GR G LD+A I +
Sbjct: 469 VLSACSHSGLVSDGYHYFNLMQEEYGIVPNTEHYNCMVDLYGRAGLLDKAKNFIEENKIS 528
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
A++WKTLLSAC+ HK + A +E+++ + DA YVL+SN++A+ +W + R
Sbjct: 529 HEAVVWKTLLSACRLHKHIEYAQLASEKLVQLEQYDAGSYVLMSNMYATNNKWLDTFKLR 588
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
+M+ER V+K+PG SW+ +KN VH+F D SHPRS EI YLE+L +K GY T
Sbjct: 589 SSMKERRVRKQPGQSWIHLKNVVHRFVALDTSHPRSAEIYAYLEKLMERLKEMGYTSRTD 648
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVML--------------PFKYISEIK 404
+HD++ E++E +LK HSEKLAIAF + + L K+I+
Sbjct: 649 LVVHDIEEEQRETSLKFHSEKLAIAFGIISTPVGTALRIFKNLRVCEDCHEAIKFITRAT 708
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
+REI+VRD RFHHF++G+CSC D+W
Sbjct: 709 DREIVVRDLYRFHHFKDGQCSCEDFW 734
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 125/257 (48%), Gaps = 13/257 (5%)
Query: 17 MKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFV 76
++ G LV ++ +R+V +W T+++G ++G + L + M G T+
Sbjct: 203 LQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRAGVTFSNYTYS 262
Query: 77 SVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYS 136
V + L++ G+Q+H VV A D V SL+ MY +CG ++ ++ F +S
Sbjct: 263 MVFALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESALSIFD--RWS 320
Query: 137 DVV-----LWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEK 191
D WS+M+A Y +G+ EEA+ F +M ++ A S+ AC++ G+ E+
Sbjct: 321 DFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFILTSVASACANAGMVEQ 380
Query: 192 GMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSAC 251
G + V+K + + +VD+ + G L++A + R+ K N +W T+L +
Sbjct: 381 GRQVHGF-VEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQTK-NVALWTTMLCSY 438
Query: 252 KTHKSTDMAGRIAEEIL 268
+H GR+A EI
Sbjct: 439 ASHGQ----GRMALEIF 451
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 10/212 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D S++ MY KSGSL + ++ R +NV W T++ A +G L+ +
Sbjct: 392 GHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQTKNVALWTTMLCSYASHGQGRMALEIF 451
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSR 119
+ M+ P++IT V+V+S+CS + G + + G + + ++ +Y R
Sbjct: 452 SRMKAEKIMPNEITLVAVLSACSHSGLVSDGYHYFNLMQEEYGIVPNTEHYNCMVDLYGR 511
Query: 120 CGCLDDSVKTFLECE--YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQ-KEFEANDVTF 176
G LD + K F+E + V+W ++++A H E A E++ Q ++++A
Sbjct: 512 AGLLDKA-KNFIEENKISHEAVVWKTLLSACRLHKHIEYAQLASEKLVQLEQYDAGSYVL 570
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKPR 208
+S +YA ++ K ++ F L R+ R
Sbjct: 571 MSNMYATNN-----KWLDTFKLRSSMKERRVR 597
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 85/194 (43%), Gaps = 34/194 (17%)
Query: 22 LVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM--RMVGFRPDKITFVSVI 79
L +V P R++ AW ++I+G A+ G D + + M P+ V+
Sbjct: 74 LHNAHRVFDGTPTRSLPAWTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGVL 133
Query: 80 SSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG------------------ 121
C+ L + G++IH ++++G DV + ++++ MY++CG
Sbjct: 134 RCCAGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDAT 193
Query: 122 --------CLDD-----SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE 168
CL D + + F E DV W+++++ HG EA+ +QM +
Sbjct: 194 SWNIVIRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRAG 253
Query: 169 FEANDVTFVSLLYA 182
++ T+ S+++A
Sbjct: 254 VTFSNYTY-SMVFA 266
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 163/445 (36%), Positives = 263/445 (59%), Gaps = 24/445 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+V+ +++ Y++S L + +V MP +N ++W+ +++G G AED L +N MR
Sbjct: 363 DVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMR 422
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+P T+ I++C EL L G+Q+H +V+ G ++LI+MY+RCG +
Sbjct: 423 SENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVK 482
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
++ FL D V W++MI+A G HG G EA+ LF++M + + ++F+++L AC+
Sbjct: 483 EAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACN 542
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL ++G +F+ M + + P +HYT ++DLLGR G + EA LI+ MP + IW
Sbjct: 543 HSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIW 602
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
+ +LS C+T ++ A+++ + PQ Y+LLSN +++A W + R+ MR+R
Sbjct: 603 EAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGCWVDAARVRKLMRDR 662
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
VKKEPG SW+E N+VH F +GD HP + E+ +LE + ++M+ GYVPDT +HDM
Sbjct: 663 GVKKEPGCSWIEAGNKVHVFLVGDTKHPEAHEVYKFLEMVGAKMRKLGYVPDTKVVLHDM 722
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPFKYISEIKN------------------- 405
+ +KE+ L HSE+LA+ F GL+ + P ++ +KN
Sbjct: 723 EPHQKEHILFAHSERLAVGF-----GLLNLPPGATVTVLKNLRICDDCHAAIMFMSKAVG 777
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
REI+VRD RFHHF++G+CSCG+YW
Sbjct: 778 REIVVRDVRRFHHFKDGECSCGNYW 802
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/330 (20%), Positives = 139/330 (42%), Gaps = 43/330 (13%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y++ G + V + + + W +I+G +G+A + + + M + D+ TF
Sbjct: 238 YVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTF 297
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASL----DVGVISSLISMYSRCG---------- 121
SV+S+C+ + G+ +H ++++ + + V ++L++ YS+CG
Sbjct: 298 TSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFD 357
Query: 122 ---------------------CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINL 160
CLD +V+ F E Y + + W M++ Y G E+A+ L
Sbjct: 358 NMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKL 417
Query: 161 FEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLG 220
F +M + + D T+ + AC G + G + +V+ ++ +
Sbjct: 418 FNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSN-SAGNALITMYA 476
Query: 221 RCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH----KSTDMAGRIAEEILGVNPQDAA 276
RCG + EA + MP +++ W ++SA H ++ ++ R+ E G+ P +
Sbjct: 477 RCGAVKEAHLMFLVMP-NIDSVSWNAMISALGQHGHGREALELFDRMVAE--GIYPDRIS 533
Query: 277 PYVLLSNIHASAKRWQGVSEFREAMRERNV 306
+L+ + S +G F R+ +
Sbjct: 534 FLTVLTACNHSGLVDEGFRYFESMKRDFGI 563
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 124/303 (40%), Gaps = 43/303 (14%)
Query: 7 VAGSSLAHMYMKSGSLVEGEKVIRLMPI--RNVIAWITLIAGKAQNGLAEDVLDQY-NLM 63
V+ +SL Y + L +P R+ + +I+ A+ A + + +L+
Sbjct: 89 VSATSLVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSLL 148
Query: 64 RMVGFRPDKITFVSVISSCSELATLG--QGQQIHAEVVKAGASLDVGVISSLISMYSRC- 120
RPD +F +++S+ L + Q+H V+K+GA + V ++L+++Y +C
Sbjct: 149 ASGSLRPDDYSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCE 208
Query: 121 ---------------------------------GCLDDSVKTFLECEYSDVVLWSSMIAA 147
G + + F E + V+W++MI+
Sbjct: 209 SPEATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISG 268
Query: 148 YGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVK---KYR 204
Y G EA LF +M + ++ TF S+L AC++ GL G +++ +
Sbjct: 269 YVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFV 328
Query: 205 RKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIA 264
+ L +V +CG + A + NM +K + + W T+LS D A +
Sbjct: 329 PEAALPVNNALVTFYSKCGNIAVARRIFDNMTLK-DVVSWNTILSGYVESSCLDKAVEVF 387
Query: 265 EEI 267
EE+
Sbjct: 388 EEM 390
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 66/127 (51%), Gaps = 11/127 (8%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE AG++L MY + G++ E + +MP + ++W +I+ Q+G + L+ +
Sbjct: 460 GFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELF 519
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVI------SSLI 114
+ M G PD+I+F++V+++C+ + +G + + + D G+I + LI
Sbjct: 520 DRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKR-----DFGIIPGEDHYTRLI 574
Query: 115 SMYSRCG 121
+ R G
Sbjct: 575 DLLGRAG 581
>gi|296087368|emb|CBI33742.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 169/447 (37%), Positives = 260/447 (58%), Gaps = 24/447 (5%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E LV+ +++ Y K G L + M R+ + W +I G QNG+ + L +
Sbjct: 121 EKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRR 180
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M +P+++T +SV+S+C +L L G+ +H+ + G +V V ++L+ MYS+CG
Sbjct: 181 MLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGS 240
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
L+D+ F + + DVV W+SMI Y HG +EA+ LF+ M + ++TF+ +L A
Sbjct: 241 LEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSA 300
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
C H G +G + F+ M +Y +P++EHY C+V+LLGR G++++A L++NM ++ + +
Sbjct: 301 CGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPV 360
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMR 302
+W TLL AC+ H + +I E ++ N ++ Y+LLSNI+A+ W GV+ R M+
Sbjct: 361 LWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMK 420
Query: 303 ERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMH 362
+ VKKEPG S +E+ N+VH+F G +HP+ EI + LEE+ +K GY P T +H
Sbjct: 421 DSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVLH 480
Query: 363 DMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEI 403
D+ EKE +L+ HSEKLAIAF GLI P K IS+I
Sbjct: 481 DIGETEKERSLEVHSEKLAIAF-----GLINTQPGTTIKIVKNLRVCADCHEVTKLISKI 535
Query: 404 KNREIIVRDASRFHHFRNGKCSCGDYW 430
R+I+VRD +RFHHF NG CSCGDYW
Sbjct: 536 TGRKIVVRDRNRFHHFVNGSCSCGDYW 562
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 92/187 (49%), Gaps = 7/187 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + ++ G++L MY K GSL + V + ++V+AW ++I G A +G +++ L +
Sbjct: 220 GIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLF 279
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVV-KAGASLDVGVISSLISMYSR 119
M +G P ITF+ ++S+C + +G I ++ + G + ++++ R
Sbjct: 280 KSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGR 339
Query: 120 CGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGK---GEEAINLFEQMEQKEFEANDVT 175
G ++ + + D VLW +++ A HGK GE+ + L ++Q +
Sbjct: 340 AGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELL--VDQNLANSGTYI 397
Query: 176 FVSLLYA 182
+S +YA
Sbjct: 398 LLSNIYA 404
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 12/168 (7%)
Query: 87 TLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIA 146
T+ QIHA + + G + L Y+ G LD SV F + V W+++I
Sbjct: 42 TISHLLQIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIH 101
Query: 147 AYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRK 206
+ G A LF+ M +K V+ ++L + G + FD M ++
Sbjct: 102 GHALRGDVVSAQQLFDTMPEKSL----VSLTAMLTCYAKHGELDAARVLFDGMEERDGVC 157
Query: 207 PRLEHYTCVVDLLGRCGYLDEAAALIRNM---PVKANAIIWKTLLSAC 251
+ ++D + G +EA L R M K N + ++LSAC
Sbjct: 158 -----WNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSAC 200
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 173/444 (38%), Positives = 266/444 (59%), Gaps = 17/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF++ ++ +SL MY K + V + + V+ W +I G AQNG + L+ +
Sbjct: 376 GFDVSVM--NSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLF 433
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ +PD T VSVI++ ++L+ Q + IH ++ +V V ++LI +++C
Sbjct: 434 CEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKC 493
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + K F + V+ W++MI YG +G G EA++LF +M+ + N++TF+S++
Sbjct: 494 GAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVI 553
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL E+GM +F+ M + Y +P ++HY +VDLLGR G LD+A I++MPVK
Sbjct: 554 AACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPG 613
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+ +L AC+ HK+ ++ + A+E+ ++P D +VLL+N++ASA W V+ R A
Sbjct: 614 ITVLGAMLGACRIHKNVELGEKTADELFDLDPDDGGYHVLLANMYASASMWDKVARVRTA 673
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M ++ ++K PG S +E++N+VH F G +HP+S I YLE L EMK GYVPDT +
Sbjct: 674 MEKKGIQKTPGCSLVELRNEVHTFYSGSTNHPQSKRIYAYLETLGDEMKAAGYVPDTNS- 732
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAF---------AEHTRGLIVML-----PFKYISEIKNR 406
+HD++ + KE L HSE+LAIAF A H R + + KYIS + R
Sbjct: 733 IHDVEEDVKEQLLSSHSERLAIAFGLLNTRHGTAIHIRKNLRVCGDCHEATKYISLVTGR 792
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EIIVRD RFHHF+NG CSCGDYW
Sbjct: 793 EIIVRDLRRFHHFKNGICSCGDYW 816
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 131/248 (52%), Gaps = 2/248 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ +L A +++ ++Y K + + K+ MP R++++W T++AG AQNG A +
Sbjct: 172 GFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVV 231
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G +PD IT VSV+ + ++L L G+ IH +AG V V ++++ Y +C
Sbjct: 232 LQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKC 291
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + F +VV W++MI Y +G+ EEA F +M + E +V+ + L
Sbjct: 292 GSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGAL 351
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
+AC++ G E+G L+ +K + + ++ + +C +D AA++ N+ K
Sbjct: 352 HACANLGDLERGRYVHRLLDEK-KIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKT- 409
Query: 241 AIIWKTLL 248
+ W ++
Sbjct: 410 VVTWNAMI 417
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 150/312 (48%), Gaps = 6/312 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE + +++ Y K GS+ V + M RNV++W T+I G AQNG +E+ +
Sbjct: 273 GFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATF 332
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G P ++ + + +C+ L L +G+ +H + + DV V++SLISMYS+C
Sbjct: 333 LKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKC 392
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
+D + F ++ VV W++MI Y +G EA+NLF +M+ + + + T VS++
Sbjct: 393 KRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVI 452
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
A + + + L ++ K + T ++D +CG + A L M + +
Sbjct: 453 TALADLSVTRQAKWIHGLAIRTLMDK-NVFVCTALIDTHAKCGAIQTARKLFDLMQER-H 510
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILG--VNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
I W ++ T+ A + E+ V P + +++ S +G+ F
Sbjct: 511 VITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYF- 569
Query: 299 EAMRERNVKKEP 310
E+M+E N EP
Sbjct: 570 ESMKE-NYGLEP 580
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 137/299 (45%), Gaps = 23/299 (7%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF + + + L ++ K S+ E +V + + + + T++ G A+N D + Y
Sbjct: 71 GFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNSTLRDAVRFY 130
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
MR P F ++ E L +G++IH V+ G ++ +++++++Y++C
Sbjct: 131 ERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKC 190
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
++D+ K F D+V W++++A Y +G A+ + QM++ + + +T VS+L
Sbjct: 191 RQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVL 250
Query: 181 YACS-----HCGLKEKGMEF---FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALI 232
A + G G F F+ MV T ++D +CG + A +
Sbjct: 251 PAVADLKALRIGRSIHGYAFRAGFEYMVNV---------ATAMLDTYFKCGSVRSARLVF 301
Query: 233 RNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAK 289
+ M + N + W T++ + ++ A ++L GV P + + ++ +HA A
Sbjct: 302 KGMSSR-NVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVS---MMGALHACAN 356
>gi|297810761|ref|XP_002873264.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319101|gb|EFH49523.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 178/441 (40%), Positives = 264/441 (59%), Gaps = 15/441 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+V+ +S+ Y K G + + ++ MP RN+ W +I G A+N E +D + LM+
Sbjct: 184 DVVSWTSMVAGYCKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMK 243
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G ++ VSVISSC+ L L G++ H VVK+ ++++ + ++L+ MY RCG ++
Sbjct: 244 REGVVANETVMVSVISSCAHLGALEFGERAHEYVVKSHMTVNLILGTALVDMYWRCGEIE 303
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+++ F E D + WSS+I HG +AI+ F QM + F D+T ++L ACS
Sbjct: 304 KAIRVFEELPDKDSLSWSSIIKGLAVHGHAHKAIHYFSQMVRLGFSPRDITLTAVLSACS 363
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL +KG+E ++ M + Y +PRLEHY C+VD+LGR G L EA I MPVK NA I
Sbjct: 364 HGGLVDKGLEIYENMKRDYGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMPVKPNAPIL 423
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
LL ACK +K+T++A R+ ++ V P+ + YVLLSNI+A A +W+ + R+ M+E+
Sbjct: 424 GALLGACKIYKNTEVAERVGNMLIEVKPEHSGYYVLLSNIYACAGQWEKLESLRDIMKEK 483
Query: 305 NVKKEPGVSWLEIKNQVHQFTMG-DKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHD 363
VKK PG S +EI ++++F+MG D+ HP +I EE+ +++L GY +TG D
Sbjct: 484 LVKKPPGWSLIEIDGKINKFSMGDDQKHPEMGKIKRLWEEILGKIRLIGYKGNTGDAFFD 543
Query: 364 MDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNREII 409
+D EEKE + HSEKLAIA+ + G + + K ISE+ RE I
Sbjct: 544 VDEEEKETAIHMHSEKLAIAYGMMKTKTGTTIRIVKNLRVCEDCHTATKLISEVYGREFI 603
Query: 410 VRDASRFHHFRNGKCSCGDYW 430
VRD +RFHHFRNG CSC DYW
Sbjct: 604 VRDRNRFHHFRNGLCSCRDYW 624
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 120/246 (48%), Gaps = 35/246 (14%)
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
PD ITF +I + +E+ + G+Q H+++V+ G DV V +SL+ MY+ CG + + +
Sbjct: 117 PDNITFPFLIKASTEMECVVVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGLIAAAGRI 176
Query: 130 FLECEYSDVVLWSSMIAAY-----------------------------GFHGKG--EEAI 158
F + + DVV W+SM+A Y G+ E+AI
Sbjct: 177 FGQMPFRDVVSWTSMVAGYCKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAI 236
Query: 159 NLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDL 218
+LFE M+++ AN+ VS++ +C+H G E G + +VK + L T +VD+
Sbjct: 237 DLFELMKREGVVANETVMVSVISSCAHLGALEFGERAHEYVVKSH-MTVNLILGTALVDM 295
Query: 219 LGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAA 276
RCG +++A + +P K +++ W +++ H A ++ LG +P+D
Sbjct: 296 YWRCGEIEKAIRVFEELPDK-DSLSWSSIIKGLAVHGHAHKAIHYFSQMVRLGFSPRDIT 354
Query: 277 PYVLLS 282
+LS
Sbjct: 355 LTAVLS 360
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 100/207 (48%), Gaps = 5/207 (2%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
++L+ G++L MY + G + + +V +P ++ ++W ++I G A +G A + ++ M
Sbjct: 284 VNLILGTALVDMYWRCGEIEKAIRVFEELPDKDSLSWSSIIKGLAVHGHAHKAIHYFSQM 343
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVK-AGASLDVGVISSLISMYSRCGC 122
+GF P IT +V+S+CS + +G +I+ + + G + ++ M R G
Sbjct: 344 VRLGFSPRDITLTAVLSACSHGGLVDKGLEIYENMKRDYGIEPRLEHYGCIVDMLGRAGK 403
Query: 123 LDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQM-EQKEFEANDVTFVSLL 180
L ++ L+ + + +++ A + E A + + E K + +S +
Sbjct: 404 LAEAENFILKMPVKPNAPILGALLGACKIYKNTEVAERVGNMLIEVKPEHSGYYVLLSNI 463
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKP 207
YAC+ G EK D+M +K +KP
Sbjct: 464 YACA--GQWEKLESLRDIMKEKLVKKP 488
>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
Length = 787
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 173/450 (38%), Positives = 263/450 (58%), Gaps = 25/450 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF + +++ ++ + + K MP + + +W +I+G AQNGL E + +
Sbjct: 343 GFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYAQNGLTEMAVALF 402
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M + RP+ IT S +S+C++L L G+ +H + + +V V+++LI MY++C
Sbjct: 403 EQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEPNVYVMTALIDMYAKC 462
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + ++ + F + +VV W++MIA YG HG+G EA+ L++ M TF+S+L
Sbjct: 463 GSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYKDMLDAHLLPTSATFLSVL 522
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA- 239
YACSH GL E+G + F M Y P +EH TC+VDLLGR G L EA LI P A
Sbjct: 523 YACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAV 582
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
+W LL AC HK +D+A ++++ ++P+++ YVLLSN+H S K++ + R+
Sbjct: 583 GPGVWGALLGACMVHKDSDLAKLASQKLFELDPENSGYYVLLSNLHTSKKQYSEAAVVRQ 642
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
+ R + K PG + +EI N+ H F GD++HP+S I YLE+LT++M GY P+T A
Sbjct: 643 EAKSRKLVKTPGYTLIEIGNKPHVFMAGDRAHPQSEAIYSYLEKLTAKMIEAGYRPETEA 702
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYI 400
++D++ EEKE+ +K HSEKLAIAF GL+ P K+I
Sbjct: 703 ALYDVEEEEKEHMVKVHSEKLAIAF-----GLLSTEPGTEIRIIKNLRVCLDCHNATKFI 757
Query: 401 SEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
S++ R I+VRDASRFHHFR+G CSCGDYW
Sbjct: 758 SKVTQRLIVVRDASRFHHFRDGVCSCGDYW 787
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 125/259 (48%), Gaps = 2/259 (0%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+ L +Y K G + + +M +++A+ LI+G + NG+ ++ + + +G
Sbjct: 251 TGLISLYSKCGDVESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLW 310
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P+ T V++I S Q +H V+K+G + + V +++ +++ R ++ + K
Sbjct: 311 PNSSTLVALIPVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKA 370
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F + W++MI+ Y +G E A+ LFEQM + N +T S L AC+ G
Sbjct: 371 FDTMPEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGAL 430
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
G ++ ++ + +P + T ++D+ +CG + EA + M K N + W +++
Sbjct: 431 SLG-KWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNK-NVVSWNAMIA 488
Query: 250 ACKTHKSTDMAGRIAEEIL 268
H A ++ +++L
Sbjct: 489 GYGLHGQGAEALKLYKDML 507
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 132/290 (45%), Gaps = 16/290 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D S+LA +Y + KV +P + + W TL+AG + + E + R
Sbjct: 148 DTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLSGSEAVE------SFAR 201
Query: 65 MV---GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
MV RPD T SV+ + +E+A + G+ +H+ K G + V++ LIS+YS+CG
Sbjct: 202 MVCDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCG 261
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
++ + F E D+V ++++I+ Y +G ++NLF ++ N T V+L+
Sbjct: 262 DVESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIP 321
Query: 182 ACSHCG--LKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
S G L + + F L P T + L R ++ A MP K
Sbjct: 322 VHSPFGHDLLAQCLHGFVLKSGFTANSPV---STAITTLHCRLNDMESARKAFDTMPEKT 378
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAK 289
W ++S + T+MA + E+++ +N + P + S + A A+
Sbjct: 379 ME-SWNAMISGYAQNGLTEMAVALFEQMVKLNVR-PNPITISSTLSACAQ 426
>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
Length = 814
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 174/466 (37%), Positives = 271/466 (58%), Gaps = 36/466 (7%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVL--- 57
G E + ++L MY + G + +++ M R++++W T+I G + D L
Sbjct: 349 GLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLL 408
Query: 58 -------------DQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGAS 104
YN + V F+P+ IT ++V+ C+ L+ L +G++IHA ++ +
Sbjct: 409 HEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRNLLA 468
Query: 105 LDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM 164
V V S+L+ MY++CGCL+ + + F + +V+ W+ +I AYG HGKG+E++ LFE M
Sbjct: 469 SQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITWNVIIMAYGMHGKGKESLELFEDM 528
Query: 165 -----EQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLL 219
+ E + +VTF++L +CSH G+ ++G+ F M ++ +P +HY C+VDL+
Sbjct: 529 VAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHKMKNEHGIEPAPDHYACIVDLV 588
Query: 220 GRCGYLDEAAALIRNMPVKANAI-IWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPY 278
GR G ++EA L+ MP + + W +LL AC+ + + ++ AE +L + P A+ Y
Sbjct: 589 GRAGKVEEAYGLVNTMPSGFDKVGAWSSLLGACRIYHNIEIGEIAAENLLQLQPDVASHY 648
Query: 279 VLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEID 338
VLLSNI++SA W R M+ VKKEPG SW+E ++VH+F GD SHP+S ++
Sbjct: 649 VLLSNIYSSAGLWDKAMNLRRRMKAMGVKKEPGCSWIEYGDEVHKFLAGDLSHPQSEKLH 708
Query: 339 LYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML- 395
+LE L+ +K GYVPDT +HD+D EEKE L HSEKLAIAF G + +
Sbjct: 709 DFLETLSERLKKEGYVPDTACVLHDIDEEEKETILCGHSEKLAIAFGILNTPPGTTIRVA 768
Query: 396 -----------PFKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
K+IS+I++REII+RDA RFHHF++G CSCGDYW
Sbjct: 769 KNLRVCNDCHTASKFISKIEDREIILRDARRFHHFKDGTCSCGDYW 814
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 142/326 (43%), Gaps = 26/326 (7%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV-G 67
GS+L MY G + G V + R + W +IAG AQ+ E L + M G
Sbjct: 255 GSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAG 314
Query: 68 FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV 127
+ T S++ + + + + IH V+K G + + ++LI MYSR G + S
Sbjct: 315 LYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSK 374
Query: 128 KTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE----------------FEA 171
+ F E D+V W+++I +Y G+ +A+ L +M++ E F+
Sbjct: 375 RIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKP 434
Query: 172 NDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAAL 231
N +T +++L C+ KG E ++ ++ + +VD+ +CG L+ A +
Sbjct: 435 NSITLMTVLPGCASLSALAKGKEIHAYAIRNL-LASQVTVGSALVDMYAKCGCLNLARRV 493
Query: 232 IRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILG-------VNPQDAAPYVLLSNI 284
MP++ N I W ++ A H + + E+++ V P + L ++
Sbjct: 494 FDQMPIR-NVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASC 552
Query: 285 HASAKRWQGVSEFREAMRERNVKKEP 310
S +G+S F + E ++ P
Sbjct: 553 SHSGMVDEGLSLFHKMKNEHGIEPAP 578
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 121/247 (48%), Gaps = 11/247 (4%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L +MY K G L + KV + R+ ++W ++I+ + E + + LM M GF
Sbjct: 51 NTLVNMYGKCGGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFE 110
Query: 70 PDKITFVSVISSCSELAT---LGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
P T VS+ +CS L L G+QIH + G ++L++MY++ G LDD+
Sbjct: 111 PSSFTLVSMALACSNLRKRDGLWLGKQIHGCCFRKGHWRTFSN-NALMAMYAKLGRLDDA 169
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHC 186
+ E D+V W+SMI+++ + + EA+ M + + + VTF S+L ACSH
Sbjct: 170 KSLLVLFEDRDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHL 229
Query: 187 GLKEKGMEFFDLMVKKYRRKPRLEHY---TCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
L G E + R +E+ + +VD+ CG + E+ L+ + + +
Sbjct: 230 DLLRTGKE---IHAYALRTDDVIENSFVGSALVDMYCNCGQV-ESGRLVFDSVLDRKIGL 285
Query: 244 WKTLLSA 250
W +++
Sbjct: 286 WNAMIAG 292
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 120/245 (48%), Gaps = 4/245 (1%)
Query: 8 AGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVG 67
+ ++L MY K G L + + ++ L R+++ W ++I+ +QN + L LM + G
Sbjct: 152 SNNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFSQNERFMEALMFLRLMVLEG 211
Query: 68 FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVI-SSLISMYSRCGCLDDS 126
+PD +TF SV+ +CS L L G++IHA ++ ++ + S+L+ MY CG ++
Sbjct: 212 VKPDGVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIENSFVGSALVDMYCNCGQVESG 271
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE-FEANDVTFVSLLYACSH 185
F + LW++MIA Y E+A+ LF +ME +N T S++ A
Sbjct: 272 RLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVR 331
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
C + ++K+ R ++D+ R G + + + +M + + + W
Sbjct: 332 CEGISRKEGIHGYVIKRGLETNRYLQ-NALIDMYSRMGDIKTSKRIFDSMEDR-DIVSWN 389
Query: 246 TLLSA 250
T++++
Sbjct: 390 TIITS 394
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 95/188 (50%), Gaps = 6/188 (3%)
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVK--AGASLDVGVISSLISMYSRCGCLD 124
GF PD F +V+ + + + L G+QIHA V K G+ V + ++L++MY +CG L
Sbjct: 5 GFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLG 64
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D+ K F D V W+S+I+A + E AI F M + FE + T VS+ ACS
Sbjct: 65 DAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACS 124
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYT--CVVDLLGRCGYLDEAAALIRNMPVKANAI 242
+ K G+ + RK ++ ++ + + G LD+A +L+ + + +
Sbjct: 125 NL-RKRDGLWLGKQIHGCCFRKGHWRTFSNNALMAMYAKLGRLDDAKSLLVLFEDR-DLV 182
Query: 243 IWKTLLSA 250
W +++S+
Sbjct: 183 TWNSMISS 190
>gi|357139833|ref|XP_003571481.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Brachypodium distachyon]
Length = 617
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 181/446 (40%), Positives = 261/446 (58%), Gaps = 25/446 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM- 63
+ V +++ YM SG + + + MP+R++++W ++AG +N AED L + M
Sbjct: 177 NAVLWTAMVSGYMDSGHVEKAMQFFEAMPVRSLVSWNAVVAGYVKNSRAEDALWVFKTMV 236
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
R RP++ T SV+ CS L+ LG G+Q+H K S V +SL+SMY +CG L
Sbjct: 237 RDADVRPNESTLSSVLLGCSNLSALGFGRQVHQWCTKLPLSRRVTAGTSLVSMYCKCGDL 296
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
D + K F E DV+ W++MI+ Y HG G EAI LFE+M+ + E N +TFV++L AC
Sbjct: 297 DGACKLFSEMRIRDVIAWNAMISGYAHHGDGREAIELFEKMKSQGVEPNWITFVAVLTAC 356
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
H G+ + GM+ F+ M + Y + R++HY+C+VDLL R G L+ A +LIR+MP + +
Sbjct: 357 IHTGMCDFGMQCFERMQEVYGIEARVDHYSCMVDLLCRAGSLERAVSLIRSMPFQPHPSA 416
Query: 244 WKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
+ TLL+A + +K+ + A A +++ NPQ+A YV L+NI+A A +W VS R M++
Sbjct: 417 YGTLLNASRVYKNMEFAEFAAGKLIEQNPQNAGAYVQLANIYAVANQWADVSRVRRWMKD 476
Query: 304 RNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHD 363
V K PG SW+EI +H F D+ HP+ I L +L MK GYVPD +HD
Sbjct: 477 NAVVKTPGYSWVEINGVIHVFRSNDRLHPQLSLIHERLCQLEERMKAMGYVPDLDFALHD 536
Query: 364 MDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIK 404
+D K L HSEKLAIAF GL+ P K IS+I+
Sbjct: 537 VDESLKVQMLMRHSEKLAIAF-----GLLSTAPGITLRIFKNLRVCGDCHTAAKLISKIE 591
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
+REII+RD +RFHHFR+G CSCGDYW
Sbjct: 592 DREIILRDTTRFHHFRSGHCSCGDYW 617
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 15/202 (7%)
Query: 7 VAGSSLAHMYMKSGSLV---EGEKVIRLMPIRNVIA-WITLIAG---KAQNGLAEDVL-- 57
V SLA ++ G L E E V P R A + L+AG A+ G D L
Sbjct: 9 VGARSLATAAIRRGDLAGAAEPEAVASTTPQRKTTADYNRLLAGYARAARPGGRRDRLLA 68
Query: 58 DQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMY 117
D +L + RPD +++ +++S C A +G + + A A +V ++++S
Sbjct: 69 DARHLFDRIP-RPDAVSYNTLLS-CHFAAGDVRGARDLFAAMPATAR-NVTSWNTMLSGL 125
Query: 118 SRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
SR G + ++ FL + + W++M++ + G A FE KE N V +
Sbjct: 126 SRSGAVGEARAVFLAMPARNSISWNAMVSCFAHAGDMCAAEECFEDAPDKE---NAVLWT 182
Query: 178 SLLYACSHCGLKEKGMEFFDLM 199
+++ G EK M+FF+ M
Sbjct: 183 AMVSGYMDSGHVEKAMQFFEAM 204
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 169/444 (38%), Positives = 262/444 (59%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFELD SL +Y++ G ++ + M +N++ W T+I G +QN D LD +
Sbjct: 532 GFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMF 591
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M PD+I+ + + +CS+++ L G+++H VK+ + V SLI MY++C
Sbjct: 592 HQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKC 651
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
GC++ S F V W+ +I YG HG G +AI LF+ M+ F + VTF++LL
Sbjct: 652 GCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALL 711
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+H GL +G+E+ M + KP+LEHY CVVD+LGR G L+EA L+ +P K +
Sbjct: 712 TACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNEALELVNELPDKPD 771
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+ IW +LLS+C+ ++ D+ ++A ++L + P A YVL+SN +A +W V + R+
Sbjct: 772 SRIWSSLLSSCRNYRDLDIGEKVANKLLELGPDKAENYVLISNFYARLGKWDEVRKMRQR 831
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+E ++K+ G SW+EI +V +F +GD+S +SM+I EL ++ GY PDT
Sbjct: 832 MKEIGLQKDAGCSWIEIGGKVSRFLVGDESLLQSMKIQQTWIELEKKINKIGYKPDTSCV 891
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNR 406
+H+++ +EK L++HSEKLAI+F +G + + K +S+I R
Sbjct: 892 LHELEEDEKIKILRNHSEKLAISFGLLNTAKGTTLRVCKNLRICVDCHNAIKLVSKIDKR 951
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EIIVRD RFHHF+NG CSCGDYW
Sbjct: 952 EIIVRDNKRFHHFKNGFCSCGDYW 975
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 137/285 (48%), Gaps = 15/285 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
+LVA + +A Y K GSL E V M + V +W LI G QNG LD Y LMR
Sbjct: 436 ELVANAFVAG-YAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMR 494
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G PD T S++S+C+ L +L G++IH +++ G LD + SL+S+Y +CG +
Sbjct: 495 GSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKIL 554
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ F E ++V W++MI + + +A+++F QM + ++++ + L ACS
Sbjct: 555 LAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACS 614
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTC-VVDLLGRCGYLDEAAALIRNMPVKANAII 243
G E VK + + TC ++D+ +CG ++++ + + +K +
Sbjct: 615 QVSALRLGKELHCFAVKSHLTEHSF--VTCSLIDMYAKCGCMEQSQNIFDRVHLKGE-VT 671
Query: 244 WKTLLSACKTHKSTDMAGRIAEEIL------GVNPQDAAPYVLLS 282
W L++ H GR A E+ G P LL+
Sbjct: 672 WNVLITGYGIHGH----GRKAIELFKSMQNAGFRPDSVTFIALLT 712
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 94/185 (50%), Gaps = 10/185 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ G++L MY K G + KV MP RN+++W +++ +NG+ E+ Y L +
Sbjct: 230 DVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEE---SYGLFK 286
Query: 65 MV-----GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ G PD T V+VI C+ + G H +K G ++ V SSL+ MYS+
Sbjct: 287 GLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSK 346
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQME-QKEFEANDVTFVS 178
CG L ++ + + +V+ W+SMI Y A L +M+ + + + N+VT ++
Sbjct: 347 CGYLCEA-RVLFDTNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLN 405
Query: 179 LLYAC 183
+L C
Sbjct: 406 VLPVC 410
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 127/270 (47%), Gaps = 10/270 (3%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY- 60
F+ D+V + L MY S + V +N+ W L++G +N L D + +
Sbjct: 125 FQNDVVLITRLVTMYSICDSPYDSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFV 184
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
++ + F PD T VI +C + + G+ +H +K DV V ++LI+MY +
Sbjct: 185 EMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKF 244
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE--FEANDVTFVS 178
G ++ +VK F + ++V W+S++ A +G EE+ LF+ + + + T V+
Sbjct: 245 GFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVT 304
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
++ C+ G GM F L + K L+ + ++D+ +CGYL EA L +
Sbjct: 305 VIPLCARQGEVRLGMVFHGLAL-KLGLCGELKVNSSLLDMYSKCGYLCEARVLFDTN--E 361
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEIL 268
N I W +++ S D R A E+L
Sbjct: 362 KNVISWNSMIGG----YSKDRDFRGAFELL 387
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 338 bits (866), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 164/415 (39%), Positives = 249/415 (60%), Gaps = 24/415 (5%)
Query: 35 RNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQI 94
+++ +W +I+G AQNGL E + + M+ RP+ +T S++S+C++L L G+ +
Sbjct: 372 KSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWV 431
Query: 95 HAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKG 154
H + + ++ V ++LI MY++CG + ++ + F + V W++MI+ YG HG G
Sbjct: 432 HDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYG 491
Query: 155 EEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC 214
EA+NLF +M VTF+S+LYACSH GL +G E F MV + +P EHY C
Sbjct: 492 HEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYAC 551
Query: 215 VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQD 274
+VDLLGR G LD+A IR MPV+ +W LL AC HK ++A ++++ ++PQ+
Sbjct: 552 MVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACMIHKDANLARLASDKLFELDPQN 611
Query: 275 AAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRS 334
YVLLSNI+++ + + + R ++ R + K PG + +E+ N +H FT GD+SHP++
Sbjct: 612 VGYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLIEVANTLHIFTSGDQSHPQA 671
Query: 335 MEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVM 394
I LE+LT +M+ G+ +TG +HD++ EEKE +K HSEKLAIAF GLI
Sbjct: 672 TAIYAMLEKLTGKMREAGFQTETGTALHDVEEEEKELMVKVHSEKLAIAF-----GLITS 726
Query: 395 LP-------------------FKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
P K+IS+I R I+VRDA+RFHHF++G CSCGDYW
Sbjct: 727 EPGTEIRIIKNLRVCLDCHNATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 781
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 141/313 (45%), Gaps = 6/313 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF + LA +Y K G + + + +++++ +I+G N E + +
Sbjct: 237 GFHSHAYVITGLACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLF 296
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ + G + + + V +I L + IH K+G + V ++L ++YSR
Sbjct: 297 KELLVSGEKVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRL 356
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
++ + F E + W++MI+ Y +G E+AI+LF++M++ E N VT S+L
Sbjct: 357 NEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSIL 416
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+ G G DL + + + + T ++D+ +CG + EA L MP K N
Sbjct: 417 SACAQLGALSLGKWVHDL-INRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEK-N 474
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILG--VNPQDAAPY-VLLSNIHASAKRWQGVSEF 297
A+ W ++S H A + E+L V+P VL + HA R +G F
Sbjct: 475 AVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVR-EGDEIF 533
Query: 298 REAMRERNVKKEP 310
R + + + P
Sbjct: 534 RSMVHDHGFEPLP 546
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 86/180 (47%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF DL GS++ Y K + KV M R+ + W T+++G +N ++ + +
Sbjct: 136 GFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIF 195
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G D T +V+ +EL L G I +K G VI+ L +YS+C
Sbjct: 196 GDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKC 255
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ + F + D+V +++MI+ Y + + E ++ LF+++ + N + V L+
Sbjct: 256 GEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLI 315
Score = 38.5 bits (88), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 110/269 (40%), Gaps = 6/269 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G DLV + L H ++ + + +P ++ + LI + N + Y
Sbjct: 37 GLHNDLVTVTKLTHKLSHLKAIDQASLLFSTIPNPDLFLYNVLIRAFSLNNSPSSAVSLY 96
Query: 61 -NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+L + PD T+ VIS S L +HA + AG D+ V S++++ Y +
Sbjct: 97 THLRKSTPLEPDNFTYAFVISGASSLGLG---LLLHAHSIVAGFGSDLFVGSAIVACYFK 153
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
+ + K F D VLW++M++ + +EAI +F M + + T ++
Sbjct: 154 FSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDMVKGGIGFDSTTVAAV 213
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L + GM + K T + L +CG + E A L+ +
Sbjct: 214 LPGVAELQDLALGMG-IQCLAMKVGFHSHAYVITGLACLYSKCGEI-ETARLLFGQIGQP 271
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEIL 268
+ + + ++S + T+ + R+ +E+L
Sbjct: 272 DLVSYNAMISGYTCNNETESSVRLFKELL 300
>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
Length = 624
Score = 338 bits (866), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 172/444 (38%), Positives = 261/444 (58%), Gaps = 15/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ D+ GS+L MY + G + V + +N ++W LI+G A+ G E L +
Sbjct: 182 GWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGESALMTF 241
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M GF T+ SV SS + L L QG+ +HA V+K+ L V ++L+ MY++
Sbjct: 242 AEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFVGNTLLDMYAKS 301
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + D+ K F + D+V W+SM+ A+ +G G+EA++ FE+M + N +TF+ +L
Sbjct: 302 GSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGVYLNQITFLCIL 361
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL ++G +F++M K+Y +P ++HY VV LLGR G L+ A I MP++
Sbjct: 362 TACSHGGLVKEGKRYFEMM-KEYDLEPEIDHYVTVVALLGRAGLLNYALVFIFKMPMEPT 420
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A +W LL+AC+ HK+ + A+ + ++P D+ P VLL NI+AS +W + R
Sbjct: 421 AAVWGALLAACRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQWDAAARVRMM 480
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+ VKKEP SW+E++N VH F D +HP++ EI E++ +++ GYVPD
Sbjct: 481 MKTTGVKKEPACSWVEMENSVHMFVANDDTHPQAEEIYKMWGEISKKIRKEGYVPDMDYV 540
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNR 406
+ +D +EKE NL++HSEKLA+AFA E G + + FKYIS++ R
Sbjct: 541 LLHVDDQEKEANLQYHSEKLALAFALIEMPAGATIRIMKNIRICGDCHSAFKYISKVFGR 600
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EI+VRD +RFHHF +G CSCGDYW
Sbjct: 601 EIVVRDTNRFHHFSSGSCSCGDYW 624
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 131/249 (52%), Gaps = 2/249 (0%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F D +SL HMY K S+++ V M +++++W +LIAG AQN + + +
Sbjct: 82 FAGDAFLDNSLIHMYCKCRSVLDARNVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLP 141
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M F+P+ TF S++ + A G G+QIHA VK G DV V S+L+ MY+RCG
Sbjct: 142 GMLKGRFKPNGFTFASLLKAAGAYADSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCG 201
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+D + F + + + V W+++I+ + G GE A+ F +M + FEA T+ S+
Sbjct: 202 KMDMATAVFDKLDSKNGVSWNALISGFARKGDGESALMTFAEMLRNGFEATHFTYSSVFS 261
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
+ + G E+G ++ V K R+K ++D+ + G + +A + + K +
Sbjct: 262 SIARLGALEQG-KWVHAHVIKSRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVDNK-DL 319
Query: 242 IIWKTLLSA 250
+ W ++L+A
Sbjct: 320 VTWNSMLTA 328
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 2/195 (1%)
Query: 56 VLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLIS 115
VL +L+ P + S I++C++ L ++IHA + + + D + +SLI
Sbjct: 35 VLRDLDLLDAGELAPTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIH 94
Query: 116 MYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVT 175
MY +C + D+ F + D+V W+S+IA Y + EAI L M + F+ N T
Sbjct: 95 MYCKCRSVLDARNVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFT 154
Query: 176 FVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM 235
F SLL A G + L VK + + + ++D+ RCG +D A A+ +
Sbjct: 155 FASLLKAAGAYADSGTGRQIHALAVKCGWHED-VYVGSALLDMYARCGKMDMATAVFDKL 213
Query: 236 PVKANAIIWKTLLSA 250
K N + W L+S
Sbjct: 214 DSK-NGVSWNALISG 227
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 338 bits (866), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 167/445 (37%), Positives = 261/445 (58%), Gaps = 25/445 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
DL ++L MY K GS+ + V M ++++++W T+I G ++N L + L+ + M+
Sbjct: 386 DLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQ 445
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+P+ IT ++ +C+ LA L +GQ+IH +++ G SLD V ++L+ MY +CG L
Sbjct: 446 -YNSKPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALG 504
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ F D+V W+ MIA YG HG G EAI F +M E ++V+F+S+LYACS
Sbjct: 505 LARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACS 564
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL ++G FF++M +P+ EHY C+VDLL R G L +A I+ MP++ +A IW
Sbjct: 565 HSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIW 624
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
LL C+ + +A ++AE + + P++ YVLL+NI+A A++W+ V + RE + R
Sbjct: 625 GALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRR 684
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
++K PG SW+EIK +VH F GD SHP + +I+L L++ + MK G+ P +
Sbjct: 685 GLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKMRYALIKA 744
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPFKYISEIKN------------------- 405
D EKE L HSEK+A+AF G++ + P K + KN
Sbjct: 745 DDTEKEMALCGHSEKIAMAF-----GILSLPPGKTVRVTKNLRVCGDCHEMAKFMSKMVK 799
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
R+II+RD++RFHHF++G CSC +W
Sbjct: 800 RDIILRDSNRFHHFKDGSCSCRGHW 824
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 119/216 (55%), Gaps = 2/216 (0%)
Query: 35 RNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQI 94
R+VI+W ++I+G NGL+E LD + M ++G D T VSV++ CS L G+ +
Sbjct: 214 RDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRAL 273
Query: 95 HAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKG 154
H +KA ++ + + L+ MYS+ G L+ +++ F VV W+SMIA Y G
Sbjct: 274 HGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLS 333
Query: 155 EEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC 214
+ ++ LF +ME++ + T ++L+AC+ GL E G + + +K+ + + L
Sbjct: 334 DMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNY-IKENKMQSDLFVSNA 392
Query: 215 VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
++D+ +CG + +A ++ M VK + + W T++
Sbjct: 393 LMDMYAKCGSMGDAHSVFSEMQVK-DIVSWNTMIGG 427
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 128/253 (50%), Gaps = 3/253 (1%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F +L + L MY KSG+L +V M R+V++W ++IAG A+ GL++ + ++
Sbjct: 282 FGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFH 341
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M G PD T +++ +C+ L G+ +H + + D+ V ++L+ MY++CG
Sbjct: 342 EMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCG 401
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+ D+ F E + D+V W++MI Y + EA+NLF +M Q + N +T +L
Sbjct: 402 SMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEM-QYNSKPNSITMACILP 460
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
AC+ E+G E +++ R +VD+ +CG L A L +P K +
Sbjct: 461 ACASLAALERGQEIHGHILRNGFSLDR-HVANALVDMYLKCGALGLARLLFDMIPEK-DL 518
Query: 242 IIWKTLLSACKTH 254
+ W +++ H
Sbjct: 519 VSWTVMIAGYGMH 531
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 53/91 (58%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF LD ++L MY+K G+L + ++P +++++W +IAG +G + + +
Sbjct: 482 GFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAF 541
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQG 91
N MR G PD+++F+S++ +CS L +G
Sbjct: 542 NEMRNSGIEPDEVSFISILYACSHSGLLDEG 572
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 110/266 (41%), Gaps = 56/266 (21%)
Query: 74 TFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL---------- 123
T+ SV+ C++L ++ G++IH+ + +D + S L+ MY CG L
Sbjct: 103 TYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKV 162
Query: 124 ---------------------------------------DDSVKTFLECEYSDVVLWSSM 144
+ + K F E DV+ W+SM
Sbjct: 163 ANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSM 222
Query: 145 IAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYR 204
I+ Y +G E+ ++LFEQM + T VS++ CS+ G+ G +K
Sbjct: 223 ISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASF 282
Query: 205 RKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIA 264
K L C++D+ + G L+ A + M ++ + W ++++ +DM+ R+
Sbjct: 283 GK-ELTLNNCLLDMYSKSGNLNSAIQVFETMGERS-VVSWTSMIAGYAREGLSDMSVRLF 340
Query: 265 EEI--LGVNPQDAAPYVLLSNIHASA 288
E+ G++P + + + +HA A
Sbjct: 341 HEMEKEGISPD---IFTITTILHACA 363
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 337 bits (865), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 175/444 (39%), Positives = 263/444 (59%), Gaps = 15/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+E D+ G++L MY K G + +V + +R+ + W +++A +QNG + L
Sbjct: 206 GWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHPDACLSLC 265
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M + G RP + T V+ IS+ ++ A L QG+++H + V ++L+ MY++C
Sbjct: 266 SEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDKVKTALVDMYAKC 325
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + F VV W++MI Y HG EA++LFE+M + + + +TFV +L
Sbjct: 326 GSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEMNRVA-KPDHITFVGVL 384
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL E+G FF+ M++ Y+ P ++HYTC+VDLLG G LDEA LI M V +
Sbjct: 385 SACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPD 444
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+ +W LL++CK H + ++ E ++ + P DA YV+LSNI+A A +W+GV++ R+
Sbjct: 445 SGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKL 504
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M +R +KK SW+E+KN+VH F GD SHP S EI LE + MK GY P TG+
Sbjct: 505 MTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIYSELERVGGLMKEAGYSPSTGSV 564
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA-----EHTRGLIVM---------LPFKYISEIKNR 406
HD++ +EK + HSE+LAIAF TR LI + K+IS+I R
Sbjct: 565 FHDVEDDEKANMVCSHSERLAIAFGLISTPPGTRLLITKNLRICEDCHVAIKFISKITER 624
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EI VRD +R+HHF++G CSCGDYW
Sbjct: 625 EITVRDVNRYHHFKDGVCSCGDYW 648
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 133/280 (47%), Gaps = 4/280 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D V + L ++Y SL + +P N+ W LI G A NG E + Y
Sbjct: 105 GFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLY 164
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G PD TF V+ +C+ L+ + G++IH VV+ G DV V ++LI MY++C
Sbjct: 165 YQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKC 224
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
GC+ + + F + D VLW+SM+AAY +G + ++L +M + T V+ +
Sbjct: 225 GCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAI 284
Query: 181 YACSHCGLKEKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
A + +G E L ++ + +++ T +VD+ +CG + A L + VK
Sbjct: 285 SASADNAALPQGRELHGLSWRQEFESHDKVK--TALVDMYAKCGSVRVARNLFERLGVK- 341
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYV 279
+ W +++ H A + EE+ V D +V
Sbjct: 342 RVVSWNAMITGYAMHGHATEALDLFEEMNRVAKPDHITFV 381
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 106/221 (47%), Gaps = 7/221 (3%)
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P + S++ SC + G+Q+HA+V AG D + + L+++Y C L +
Sbjct: 73 PTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLL 132
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F ++ LW+ +I Y ++G E A+ L+ QM ++ TF +L AC+
Sbjct: 133 FDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAI 192
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
E G E + +V+ K ++D+ +CG + A + + V+ +A++W ++L+
Sbjct: 193 EHGREIHEHVVQTGWEKDVFVG-AALIDMYAKCGCVGSAREVFDKILVR-DAVLWNSMLA 250
Query: 250 ACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASA 288
A + D + E++ G+ P +A L++ I ASA
Sbjct: 251 AYSQNGHPDACLSLCSEMVLTGLRPTEA---TLVTAISASA 288
>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 337 bits (865), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 173/446 (38%), Positives = 257/446 (57%), Gaps = 26/446 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D G++L +Y SGS+ +G K P +V++W +LI G QNG E L ++ +
Sbjct: 284 DEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELL 343
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G +PD+ T ++S+C+ LA + G+QIHA +K G + +S I MY++CG +D
Sbjct: 344 FSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDID 403
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ TF E + D+V WS MI++ HG +EA++LFE M+ N +TF+ +L ACS
Sbjct: 404 SANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACS 463
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL E+G+ +F++M K + P ++H C+VDLLGR G L EA + I + + + ++W
Sbjct: 464 HGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMW 523
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
++LLSAC+ HK+TD R+AE ++ + P+ AA YVLL NI+ A +E R M++R
Sbjct: 524 RSLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDR 583
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
VKKEPG+SW+E+ N VH F GD+SHP S I + LEE+ E+K Y+ +
Sbjct: 584 GVKKEPGLSWIEVGNVVHSFVAGDRSHPNSQVIYVQLEEMLEEIKKLDYIDEKLVSDASE 643
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP--------------------FKYISEIK 404
+ + +HSEKLA+ F I+ LP K S ++
Sbjct: 644 PKHKDNSMVSYHSEKLAVTFG------IISLPRSAPVRVMKNLRSCWHCHETMKLFSRLE 697
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
NREII+RD RFH FR+G CSCGDYW
Sbjct: 698 NREIILRDPIRFHRFRDGSCSCGDYW 723
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 131/263 (49%), Gaps = 15/263 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQ-----NGLAED 55
G +LD+V G++L Y K G L + K+ +LMP NV+ + +IAG Q + A +
Sbjct: 174 GLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANE 233
Query: 56 VLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLIS 115
+ + M+ G +P + TF S++ +CS + G+QIHA++ K D + ++L+
Sbjct: 234 AMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVE 293
Query: 116 MYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVT 175
+YS G ++D +K F DVV W+S+I + +G+ E + LF ++ + ++ T
Sbjct: 294 LYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFT 353
Query: 176 FVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV----VDLLGRCGYLDEAAAL 231
+L AC++ + G + + Y K + ++T + + + +CG +D A
Sbjct: 354 ISIMLSACANLAAVKSGEQ-----IHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMT 408
Query: 232 IRNMPVKANAIIWKTLLSACKTH 254
+ + + W ++S+ H
Sbjct: 409 FKETK-NPDIVSWSVMISSNAQH 430
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 106/231 (45%), Gaps = 24/231 (10%)
Query: 32 MPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQG 91
MP RNV++W +LI+G Q G +V++ + RM R DK TF + +S C L G
Sbjct: 1 MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60
Query: 92 QQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFH 151
+ IHA + +G V + +SLI MY +CG +D + F + D V W+S+IA Y
Sbjct: 61 RLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRI 120
Query: 152 GKGEEAINLFEQMEQKEFEANDVTFVSLLYACS-------HCGLKEKGMEF-----FDLM 199
G +E + L +M + N S L AC CG G D++
Sbjct: 121 GSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVV 180
Query: 200 VKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
V T ++D + G L++A + + MP N +++ +++
Sbjct: 181 VG-----------TALLDTYAKIGDLEDATKIFKLMP-DPNVVMYNAMIAG 219
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 114/246 (46%), Gaps = 9/246 (3%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+SL MY K G + V + ++W +LIAG + G +++L M G
Sbjct: 80 NSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLN 139
Query: 70 PDKITFVSVISSCSE--LATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV 127
+ S + +C +++ G+ +H VK G LDV V ++L+ Y++ G L+D+
Sbjct: 140 LNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDAT 199
Query: 128 KTFLECEYSDVVLWSSMIAAYGFHGK-----GEEAINLFEQMEQKEFEANDVTFVSLLYA 182
K F +VV++++MIA + EA+ LF +M+ + + ++ TF S+L A
Sbjct: 200 KIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKA 259
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
CS E G + + KY + +V+L G +++ + P K + +
Sbjct: 260 CSTIEAFECGKQ-IHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTP-KLDVV 317
Query: 243 IWKTLL 248
W +L+
Sbjct: 318 SWTSLI 323
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 337 bits (865), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 176/449 (39%), Positives = 276/449 (61%), Gaps = 27/449 (6%)
Query: 4 LDLVAG--SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
LD V G ++L Y K G + KV M ++V++W ++IA AQNGL+ D + ++
Sbjct: 223 LDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFH 282
Query: 62 -LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+++ G + +++T +++ +C+ L G +H +V+K G +V + +S+I MY +C
Sbjct: 283 GMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKC 342
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + F + +V W++MIA YG HG EA+++F QM + N +TF+S+L
Sbjct: 343 GQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFISVL 402
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH G E+G +F+ M +Y +P +EHY C+VDLLGR GY+ EA LI++M V+ +
Sbjct: 403 AACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKSMKVRRD 462
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
++W +LL+AC+ HK ++A A E+ ++P + YVLL+NI+A A RW+ V R
Sbjct: 463 FVLWGSLLAACRIHKDVELAEISARELFKLDPSNCGYYVLLANIYADAGRWKDVERMRIL 522
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
+++R + K PG S +E+K +VH F +GDK HP+ +I YLEEL+ +++ GYVP+ +
Sbjct: 523 VKDRGLVKPPGYSLVELKGRVHVFLVGDKEHPQHEKIYKYLEELSVKLQEAGYVPNMASV 582
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
+HD+D EEKE ++ HSEKLA+AF G++ +P K IS
Sbjct: 583 LHDVDEEEKEMIVRVHSEKLAVAF-----GVMNSIPGSTIHVIKNLRVCGDCHTVIKLIS 637
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+I +REIIVRDA RFHHF++G CSCGDYW
Sbjct: 638 KIVSREIIVRDAKRFHHFKDGLCSCGDYW 666
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 147/325 (45%), Gaps = 18/325 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE DL S+L MY K G L + +P RN++ W +LI G QN A + L +
Sbjct: 112 GFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQNDDAHEALMVF 171
Query: 61 NLMRM---------VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVIS 111
VG D + +SV+S+CS ++ + +H +K G +GV +
Sbjct: 172 KEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKVGLDKVMGVEN 231
Query: 112 SLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM-EQKEFE 170
+L+ Y++CG + S K F + DVV W+SMIA Y +G +A +F M + +
Sbjct: 232 TLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGK 291
Query: 171 ANDVTFVSLLYACSHCGLKEKGMEFFDLMVK-KYRRKPRLEHYTCVVDLLGRCGYLDEAA 229
N+VT +LL AC+H G GM D ++K Y + T ++D+ +CG + A
Sbjct: 292 YNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMA--TSIIDMYCKCGQAEMAR 349
Query: 230 ALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHAS 287
M K N W +++ H A + +++ GV P +L+ +
Sbjct: 350 NAFDGMKEK-NVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFISVLAACSHA 408
Query: 288 AKRWQGVSEFREAMRERNVKKEPGV 312
+G F E NV EPGV
Sbjct: 409 GFLEEGWRWFNAMSHEYNV--EPGV 431
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 110/223 (49%), Gaps = 11/223 (4%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
+V +W +LIA A+ G + + L ++ MR + +P++ TF I SCS L L G+Q H
Sbjct: 46 DVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALFDLNSGKQAH 105
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGE 155
+ + G D+ V S+LI MYS+CG L ++ F E ++V W+S+I Y +
Sbjct: 106 QQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQNDDAH 165
Query: 156 EAINLFEQMEQKEFEAN---------DVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRK 206
EA+ +F++ ++ E N V +S+L ACS K + +K K
Sbjct: 166 EALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKVGLDK 225
Query: 207 PRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
T ++D +CG + + + +M K + + W ++++
Sbjct: 226 VMGVENT-LLDAYAKCGEVSLSRKVFDDMAEK-DVVSWNSMIA 266
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 52/123 (42%), Gaps = 18/123 (14%)
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
+DV W+S+IA G E++ F M + + + N TF + +CS
Sbjct: 45 TDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCS---------AL 95
Query: 196 FDLMVKKYRRKPRLEH--------YTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTL 247
FDL K + L + ++D+ +CG L A L +P + N + W +L
Sbjct: 96 FDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIP-RRNIVTWTSL 154
Query: 248 LSA 250
++
Sbjct: 155 ITG 157
>gi|296085848|emb|CBI31172.3| unnamed protein product [Vitis vinifera]
Length = 644
Score = 337 bits (865), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 180/461 (39%), Positives = 263/461 (57%), Gaps = 53/461 (11%)
Query: 20 GSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVI 79
GSL KV +MP R++++W T+I+G AQNG+ ED L M RPD T SV+
Sbjct: 187 GSL---RKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVL 243
Query: 80 SSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVV 139
+E L +G++IH ++ G DV + SSLI MY++C +DDS + F D +
Sbjct: 244 PIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGI 303
Query: 140 LWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL-------------------- 179
W+S+IA +G +E + F+QM + + N V+F S+
Sbjct: 304 SWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYI 363
Query: 180 ----------------LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCG 223
L ACSH GL ++ ++F+ M + YR P LEHY V DLLGR G
Sbjct: 364 IRMEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVG 423
Query: 224 YLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSN 283
L+EA I +M ++ +W TLL+AC+ HK+ ++A ++++++ V+PQ+ YVLLSN
Sbjct: 424 RLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSN 483
Query: 284 IHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEE 343
I+++A RW+ + R AMR++ +KK+P SW+EIKN+VH F GDKSHP I+ L+
Sbjct: 484 IYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKV 543
Query: 344 LTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFA----------EHTRGLIV 393
L +M+ GYV DT +HD++ E+K Y L HSE+LAI F T+ L V
Sbjct: 544 LLEQMEREGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTKNLRV 603
Query: 394 ML----PFKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+ K+IS+I REI+VRD SRFHHF++GKCSCGD+W
Sbjct: 604 CVDCHTATKFISKIVGREIVVRDNSRFHHFKDGKCSCGDFW 644
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 97/189 (51%), Gaps = 9/189 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G++ D+ GSSL MY K + + +V ++P + I+W ++IAG QNG+ ++ L +
Sbjct: 266 GYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFF 325
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSR 119
M + +P+ ++F S++ +C+ L TL G+Q+H +++ G + ++++ S
Sbjct: 326 QQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRMEGVKPNYVAFMAVLTACSH 385
Query: 120 CGCLDDSVKTFLECEYSDVVL-----WSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDV 174
G +D++ K F ++ ++++ G G+ EEA +E + E
Sbjct: 386 AGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEA---YEFISDMHIEPTGS 442
Query: 175 TFVSLLYAC 183
+ +LL AC
Sbjct: 443 VWSTLLAAC 451
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 113/263 (42%), Gaps = 33/263 (12%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
+AW ++I +GL L + M G PD F SV+ SC+ + L G+ +H
Sbjct: 70 TTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVH 129
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDDS---VKTFLECEYSDV-------------- 138
+++ G D+ ++L++MYS+ L++ K F E + SDV
Sbjct: 130 GCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSL 189
Query: 139 ------------VLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHC 186
V W+++I+ +G E+A+ + +M + + T S+L +
Sbjct: 190 RKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEY 249
Query: 187 GLKEKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
KG E ++ Y + + ++D+ +C +D++ + +P + + I W
Sbjct: 250 VNLLKGKEIHGYAIRNGYDADVFIG--SSLIDMYAKCTRVDDSCRVFYMLP-QHDGISWN 306
Query: 246 TLLSACKTHKSTDMAGRIAEEIL 268
++++ C + D + +++L
Sbjct: 307 SIIAGCVQNGMFDEGLKFFQQML 329
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
Query: 77 SVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYS 136
+++ + S + + Q +Q+HA++++ ++S+++S+YS L DS+ F
Sbjct: 10 TLLQNPSSVKSKSQAKQLHAQILRTSLP-SPSLLSTILSIYSNLNLLHDSLLIFNSLPSP 68
Query: 137 DVVL-WSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
L W S+I Y HG +++ F QM + F S+L +C+
Sbjct: 69 PTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCT 117
>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 337 bits (864), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 169/442 (38%), Positives = 265/442 (59%), Gaps = 14/442 (3%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E D S++ +MY K G + V + RNV+ W ++A QNG E+ L+ ++
Sbjct: 266 ECDAYVSSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSK 325
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M + ++ T+ ++++C+ L+ G +H K+G V V ++LI+MY++ G
Sbjct: 326 MEQENVKSNEFTYAVLLNACAGLSARRNGSLLHGHSEKSGFKHHVMVGNALINMYAKSGD 385
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
++ + K F + + D++ W++MI + HG G++A+ +F+ M E N VTF +L A
Sbjct: 386 IEAAKKVFSDMMHRDIITWNAMICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFTGVLSA 445
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
C H GL ++G + ++K++ +P LEHYTC+V LL + G L+EA +R PVK + +
Sbjct: 446 CGHLGLVQEGFYYLHHLMKQFGVQPGLEHYTCIVSLLSKTGQLNEARNFMRTAPVKWDVV 505
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMR 302
W+TLL+AC H++ + +AE +L ++P D Y LLSNI+A KRW GV + R+ MR
Sbjct: 506 AWRTLLNACHVHQNYGLGRWVAEFVLEMDPNDVGTYTLLSNIYAKEKRWDGVVKVRKLMR 565
Query: 303 ERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMH 362
++ +KKEPGVSW+EI N H FT D HP + ++EL + +K GY PD GA +H
Sbjct: 566 DKKIKKEPGVSWIEIGNVTHIFTSEDNKHPDYGQTYQKVKELLAMIKPLGYTPDIGAVLH 625
Query: 363 DMDSEEKEYNLKHHSEKLAIAF------AEHTRGLIVML--------PFKYISEIKNREI 408
D++ E+KEY L +HSEKLAIA+ +E + +I L + IS++ NR I
Sbjct: 626 DVEDEQKEYYLSYHSEKLAIAYGLLKLPSEASILVIKNLRICDDCHSAVRLISKVTNRVI 685
Query: 409 IVRDASRFHHFRNGKCSCGDYW 430
+VRDA+RFHHFR+G+CSC DYW
Sbjct: 686 VVRDANRFHHFRDGRCSCLDYW 707
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 141/288 (48%), Gaps = 12/288 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF ++L MY K + + V +P+ +++A+ ++++ +NG + L+
Sbjct: 163 GFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLVENGYLREGLEVL 222
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M + DK+TFV+ S C+ L L G +H +++ + D V S++I+MY +C
Sbjct: 223 RSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVSSAIINMYGKC 282
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + F + +VVLW++++A+ +G EEA+NLF +MEQ+ ++N+ T+ LL
Sbjct: 283 GKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQENVKSNEFTYAVLL 342
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV----VDLLGRCGYLDEAAALIRNMP 236
AC+ + G ++ + K +H+ V +++ + G ++ A + +M
Sbjct: 343 NACAGLSARRNGS-----LLHGHSEKSGFKHHVMVGNALINMYAKSGDIEAAKKVFSDM- 396
Query: 237 VKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNI 284
+ + I W ++ H A + +++L ++ YV + +
Sbjct: 397 MHRDIITWNAMICGFSHHGLGKKALLVFQDMLAA--EEHPNYVTFTGV 442
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 120/252 (47%), Gaps = 7/252 (2%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E ++ +SL + Y K + + MP RNV++W L+ G NG + V+
Sbjct: 63 ENSIIEVNSLINFYAKVNQVSIAHNLFDRMPERNVVSWSALMTGYLLNGFSLKVIRLLKD 122
Query: 63 MRMVG-FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M G P++ ISSC + + +G+Q H ++K G S V ++L+SMYS+C
Sbjct: 123 MISEGNVSPNEYILAIAISSCCDRGRVEEGRQCHGLLLKTGFSFHNYVRNALVSMYSKCS 182
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+ D++ + E +D+V ++S++++ +G E + + M + + + VTFV+
Sbjct: 183 IVQDAMGVWNEVPVNDIVAYNSILSSLVENGYLREGLEVLRSMVSESVKWDKVTFVNAFS 242
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY--TCVVDLLGRCGYLDEAAALIRNMPVKA 239
C+ G+ M+ + Y + ++++ G+CG A + + +
Sbjct: 243 LCASLKDLRLGLHVHGKMLTS---DVECDAYVSSAIINMYGKCGKSLMARGVFDGLQSR- 298
Query: 240 NAIIWKTLLSAC 251
N ++W ++++C
Sbjct: 299 NVVLWTAVMASC 310
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 94/191 (49%), Gaps = 15/191 (7%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ ++ G++L +MY KSG + +KV M R++I W +I G + +GL + L +
Sbjct: 365 GFKHHVMVGNALINMYAKSGDIEAAKKVFSDMMHRDIITWNAMICGFSHHGLGKKALLVF 424
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQG-QQIHAEVVKAGASLDVGVISSLISMYSR 119
M P+ +TF V+S+C L + +G +H + + G + + ++S+ S+
Sbjct: 425 QDMLAAEEHPNYVTFTGVLSACGHLGLVQEGFYYLHHLMKQFGVQPGLEHYTCIVSLLSK 484
Query: 120 CGCLDDSVKTFLECEYS--DVVLWSSMIAAYGFH---GKGEEAINLFEQMEQKEFEANDV 174
G L+++ + F+ DVV W +++ A H G G +M + NDV
Sbjct: 485 TGQLNEA-RNFMRTAPVKWDVVAWRTLLNACHVHQNYGLGRWVAEFVLEM-----DPNDV 538
Query: 175 ---TFVSLLYA 182
T +S +YA
Sbjct: 539 GTYTLLSNIYA 549
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 36/195 (18%), Positives = 86/195 (44%), Gaps = 17/195 (8%)
Query: 68 FRPDKIT------FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVI--SSLISMYSR 119
RP+ ++ + ++ ++ L G+ IH+ ++ + + +I +SLI+ Y++
Sbjct: 19 LRPNAVSPSSPLDLIKLLKLSADTKNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAK 78
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM-EQKEFEANDVTFVS 178
+ + F +VV WS+++ Y +G + I L + M + N+
Sbjct: 79 VNQVSIAHNLFDRMPERNVVSWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAI 138
Query: 179 LLYACSHCGLKEKGMEFFDLMVK---KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM 235
+ +C G E+G + L++K + R +V + +C + +A + +
Sbjct: 139 AISSCCDRGRVEEGRQCHGLLLKTGFSFHNYVR----NALVSMYSKCSIVQDAMGVWNEV 194
Query: 236 PVKANAIIWKTLLSA 250
PV + + + ++LS+
Sbjct: 195 PVN-DIVAYNSILSS 208
>gi|449500413|ref|XP_004161091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 337 bits (864), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 166/444 (37%), Positives = 262/444 (59%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G L++ +SL +MY KSG L ++ +P N ++W ++IA + NG A + +D +
Sbjct: 167 GGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYF 226
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
N MR +G D+ T ++++ +C L + IH + G + + ++L+ Y++
Sbjct: 227 NKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKL 286
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L S F E ++D V W++M+A Y HG G EAI LFE M K E + VTF LL
Sbjct: 287 GRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLL 346
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL +G +F++M + Y +PR++HY+C+VDLLGRCG L++A +I+NMP++ N
Sbjct: 347 SACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPN 406
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A +W LL AC+ H + ++ +AE ++ + P D Y++LSN++++++ W+ ++ R
Sbjct: 407 AGVWGALLGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLSNMYSASRSWKDAAKVRAL 466
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
++ER +K+ PG S +E N+ H F +GD+SHP + +I LEEL +++ GY T
Sbjct: 467 LKERGLKRTPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELLGKIRKAGYSSKTEYV 526
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAF----AEHTRGLIVMLPF----------KYISEIKNR 406
+ D++ E KE + HSEKLAIAF ++ LI+ K IS I+ R
Sbjct: 527 LQDVEEEVKEDMINKHSEKLAIAFGLLVSKEGEALIITKNLRICGDCHSTAKLISLIEKR 586
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
II+RD RFHHF +G CSC DYW
Sbjct: 587 TIIIRDPKRFHHFSDGFCSCADYW 610
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 139/295 (47%), Gaps = 7/295 (2%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D G L Y K G + K+ MP +++++W +LI+G ++ L + Y +
Sbjct: 73 DGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFSR-CLHMSLTAFYTMKF 131
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+ +P+++T +S+IS+C+ L G+ IH +K G +L+V V +SLI+MY + G L
Sbjct: 132 EMSVKPNEVTILSMISACN--GALDAGKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLT 189
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ + F + V W+S+IAA +G E I+ F +M + E ++ T ++LL AC
Sbjct: 190 SACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACL 249
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H G+ + LM ++ T ++D + G L + + + A+ + W
Sbjct: 250 HLGVGKLAESIHGLMFCT-GFGAKITIATALLDTYAKLGRLSASYGVFTEVGF-ADRVAW 307
Query: 245 KTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEF 297
+L+ H A ++ E + G+ P LLS S +G S F
Sbjct: 308 TAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYF 362
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 110/228 (48%), Gaps = 17/228 (7%)
Query: 32 MPIR--NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKIT--FVSVISSCSELAT 87
MP+R + I + I + Q L + ++L+R P+ I + ++SC ++
Sbjct: 1 MPLRWNSSILYNFFIQSRTQYPLL--LHRSFHLVRQCA-TPEAIVSALLIAVNSCPSISN 57
Query: 88 LGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAA 147
++IHA V K+ D + L++ Y++ G +D++K F + + D+V W+S+I+
Sbjct: 58 C---REIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLIS- 113
Query: 148 YGFHGKGEEAINLFEQME-QKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRK 206
GF ++ F M+ + + N+VT +S++ AC+ K + F + V
Sbjct: 114 -GFSRCLHMSLTAFYTMKFEMSVKPNEVTILSMISACNGALDAGKYIHGFGIKVGG---T 169
Query: 207 PRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
++ ++++ G+ G L A L +P N + W ++++A T+
Sbjct: 170 LEVKVANSLINMYGKSGDLTSACRLFEAIP-DPNTVSWNSIIAAQVTN 216
>gi|115465559|ref|NP_001056379.1| Os05g0572900 [Oryza sativa Japonica Group]
gi|52353535|gb|AAU44101.1| unknown protein [Oryza sativa Japonica Group]
gi|113579930|dbj|BAF18293.1| Os05g0572900 [Oryza sativa Japonica Group]
gi|215737011|dbj|BAG95940.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 687
Score = 337 bits (864), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 171/443 (38%), Positives = 261/443 (58%), Gaps = 14/443 (3%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
EL++ GS+L MY K E +V ++P +N+++W ++ QN L ED L +
Sbjct: 245 LELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKNIVSWTAIMTAYTQNELFEDALQLFL 304
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M M G RP++ T+ ++SC+ LATL G + A +K G + V ++L++MYS+ G
Sbjct: 305 DMEMEGVRPNEFTYAVALNSCAGLATLKNGNALGACTMKTGHWGLLPVCNALMNMYSKSG 364
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
++D+ + FL DVV W+S+I Y HG+ EA+ F M E + VTF+ +L
Sbjct: 365 SVEDARRVFLSMPCRDVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLS 424
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
AC+ GL ++G + ++M+K+ KP EHYTC+V LL R G LDEA I + + +
Sbjct: 425 ACAQLGLVDEGFYYLNIMMKEVGVKPGKEHYTCMVGLLCRVGRLDEAERFIESNCIGTDV 484
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
+ W++LLS+C+ +++ + R+AE+I + P+D YVLLSN++A A RW GV + R M
Sbjct: 485 VAWRSLLSSCQVYRNYGLGHRVAEQIFQLKPKDVGTYVLLSNMYAKANRWDGVVKVRRLM 544
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
RE V+KEPGVSW+++ ++VH FT DK HP +I L+EL ++K+ GYVP+ +
Sbjct: 545 RELGVRKEPGVSWIQVGSEVHVFTSEDKKHPYMEQITKKLQELIDKIKVIGYVPNIAVAL 604
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFA----EHTRGLIVM----------LPFKYISEIKNRE 407
HD++ E+KE +L +HSEKLA+AF + +M + K IS R
Sbjct: 605 HDVEDEQKEEHLMYHSEKLALAFGLIRTPKGEAIRIMKNVRICDDCHVAIKLISLATGRR 664
Query: 408 IIVRDASRFHHFRNGKCSCGDYW 430
I+VRD RFH +G CSC DYW
Sbjct: 665 IVVRDTVRFHCIEDGVCSCDDYW 687
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 127/249 (51%), Gaps = 9/249 (3%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
D+V ++L +Y+K G L +V MP RN ++ L++G A +G D L L+
Sbjct: 48 FDVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMSGYASSGRHRDAL---ALL 104
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
R+ F ++ S +++ + + + G+Q H +KAG + V S+++ MY +C +
Sbjct: 105 RVADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHPYVCSAVLHMYCQCAHM 164
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
D++VK F +V ++SMI + G+ + + ++ M + + + V++V++L
Sbjct: 165 DEAVKVFDNVSSFNVFAFNSMINGFLDRGQMDGSTSIVRSMVRNVGQWDHVSYVAVL--- 221
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHY--TCVVDLLGRCGYLDEAAALIRNMPVKANA 241
HC ++ + + + +R+ L Y + +VD+ G+C + EA + +P K N
Sbjct: 222 GHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEK-NI 280
Query: 242 IIWKTLLSA 250
+ W +++A
Sbjct: 281 VSWTAIMTA 289
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 116/240 (48%), Gaps = 4/240 (1%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY-NLMRMVGF 68
S++ HMY + + E KV + NV A+ ++I G G + +++R VG
Sbjct: 152 SAVLHMYCQCAHMDEAVKVFDNVSSFNVFAFNSMINGFLDRGQMDGSTSIVRSMVRNVG- 210
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
+ D +++V+V+ C+ + G Q+H + +K L+V V S+L+ MY +C ++ +
Sbjct: 211 QWDHVSYVAVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEANR 270
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F ++V W++++ AY + E+A+ LF ME + N+ T+ L +C+
Sbjct: 271 VFEVLPEKNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSCAGLAT 330
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
+ G K L ++++ + G +++A + +MP + + + W +++
Sbjct: 331 LKNG-NALGACTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCR-DVVSWNSII 388
>gi|242081563|ref|XP_002445550.1| hypothetical protein SORBIDRAFT_07g021340 [Sorghum bicolor]
gi|241941900|gb|EES15045.1| hypothetical protein SORBIDRAFT_07g021340 [Sorghum bicolor]
Length = 595
Score = 337 bits (864), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 175/443 (39%), Positives = 258/443 (58%), Gaps = 17/443 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D + +SL Y G K+ MP R+ +AW LI+ A+N +D L + MR
Sbjct: 153 DALLATSLMACYANRGDGDGARKLFGEMPARDAVAWNVLISCCARNRRTKDALKLFEEMR 212
Query: 65 M--VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
G PD +T + ++ +C+ L L G+Q+ A + G + V +SLI+MYSRCGC
Sbjct: 213 GRDSGAEPDDVTCILLLQACTSLGALDFGEQVWAYAEEHGYGAKLKVRNSLIAMYSRCGC 272
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
+D + + F VV WS+MI+ +G G++AI+ FE+M + + ++ TF +L A
Sbjct: 273 VDKAYRVFCGTPQKSVVTWSAMISGLAANGFGDDAISAFEEMIRSDVAPDEQTFTGVLSA 332
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRN-MPVKANA 241
CSH GL ++G FFD+M +Y KP + HY C+VDL+GR G LDEA L+ N M V +A
Sbjct: 333 CSHSGLVDEGFRFFDMMRCEYGLKPNVRHYGCIVDLMGRAGLLDEAYELVTNEMKVAPDA 392
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
IW+TLL AC+ H D+ R+ ++ + Q A YVLL N +A+ W VSE R+ M
Sbjct: 393 TIWRTLLGACRIHGHVDLGERVISNLIELKAQQAGDYVLLLNTYAAVGEWSKVSEVRKLM 452
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
+E+ ++ PG + +E +V++F D +HPR +EI L E+ ++++ GYVP+ +++
Sbjct: 453 QEKGIQTTPGCTTVEHNGEVYEFIADDDAHPRKVEIYEKLNEINKQLRIAGYVPNVSSEL 512
Query: 362 HDMDSEEKEYNLKHHSEKLAIAF-------------AEHTRGLIVMLPF-KYISEIKNRE 407
HD+DSE KE L +HSEKLAIAF A++ R + F K S I NR
Sbjct: 513 HDLDSEGKESALTYHSEKLAIAFALLVTPQNRPIRLAKNLRVCVDCHNFTKVFSGIYNRL 572
Query: 408 IIVRDASRFHHFRNGKCSCGDYW 430
+IVRD +RFHHF+ GKCSC DYW
Sbjct: 573 VIVRDRTRFHHFQGGKCSCNDYW 595
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 107/225 (47%), Gaps = 10/225 (4%)
Query: 55 DVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLI 114
D L MR +G R + T ++ LA +Q+HA VV G D + +SL+
Sbjct: 105 DALRFLRRMRALGRRGNAFTLAILLKPRCALA---HARQLHANVVAEGHLRDALLATSLM 161
Query: 115 SMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE--FEAN 172
+ Y+ G D + K F E D V W+ +I+ + + ++A+ LFE+M ++ E +
Sbjct: 162 ACYANRGDGDGARKLFGEMPARDAVAWNVLISCCARNRRTKDALKLFEEMRGRDSGAEPD 221
Query: 173 DVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALI 232
DVT + LL AC+ G + G + + +++ +L+ ++ + RCG +D+A +
Sbjct: 222 DVTCILLLQACTSLGALDFGEQVW-AYAEEHGYGAKLKVRNSLIAMYSRCGCVDKAYRVF 280
Query: 233 RNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAP 277
P K+ + W ++S + D A EE++ D AP
Sbjct: 281 CGTPQKS-VVTWSAMISGLAANGFGDDAISAFEEMI---RSDVAP 321
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 96/209 (45%), Gaps = 12/209 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ L +SL MY + G + + +V P ++V+ W +I+G A NG +D + +
Sbjct: 252 GYGAKLKVRNSLIAMYSRCGCVDKAYRVFCGTPQKSVVTWSAMISGLAANGFGDDAISAF 311
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEV-VKAGASLDVGVISSLISMYSR 119
M PD+ TF V+S+CS + +G + + + G +V ++ + R
Sbjct: 312 EEMIRSDVAPDEQTFTGVLSACSHSGLVDEGFRFFDMMRCEYGLKPNVRHYGCIVDLMGR 371
Query: 120 CGCLDDSVKTFL-ECEYS-DVVLWSSMIAAYGFHGK---GEEAI-NLFEQMEQKEFEAND 173
G LD++ + E + + D +W +++ A HG GE I NL E Q +A D
Sbjct: 372 AGLLDEAYELVTNEMKVAPDATIWRTLLGACRIHGHVDLGERVISNLIELKAQ---QAGD 428
Query: 174 VTFVSLLYACSHCGLKEKGMEFFDLMVKK 202
+V LL + G K E LM +K
Sbjct: 429 --YVLLLNTYAAVGEWSKVSEVRKLMQEK 455
>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
Length = 818
Score = 337 bits (864), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 169/449 (37%), Positives = 260/449 (57%), Gaps = 24/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E DL G++L Y K + K+ + N ++W T++ G +Q+GL E+ L +
Sbjct: 375 GHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVF 434
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ ++T+ SV+ +C+ A++ QIH + K+ + D + +SLI Y++C
Sbjct: 435 CEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKC 494
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + D++K F D++ W+++I+ Y HG+ +A+ LF++M + E+ND+TFV+LL
Sbjct: 495 GYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALL 554
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
C GL G+ FD M + KP +EHYTC+V LLGR G L++A I ++P +
Sbjct: 555 SVCCSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPS 614
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A++W+ LLS+C HK+ + AE+IL + PQD YVLLSN++A+A V+ R++
Sbjct: 615 AMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKS 674
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
MR V+K PG+SW+EIK ++H F++G HP I+ LE L + GY+PD
Sbjct: 675 MRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVINAMLEWLNLKTSREGYIPDINVV 734
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
+HD+D E+K L HSE+LA+A+ GL++ P F IS
Sbjct: 735 LHDVDKEQKTRMLWVHSERLALAY-----GLVMTPPGHPIRILKNLRSCLDCHTAFTVIS 789
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+I REIIVRD +RFHHF +GKCSCGDYW
Sbjct: 790 KIVKREIIVRDINRFHHFEDGKCSCGDYW 818
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 123/247 (49%), Gaps = 4/247 (1%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G +L MY K G + + ++P +VI +I+ AQ+ E + + +
Sbjct: 282 GGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSV 341
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
P++ + SV+ +C+ + L G+QIH +K G D+ V ++L+ Y++C +D S+K
Sbjct: 342 LPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLK 401
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC-SHCG 187
F ++ V W++++ + G GEEA+++F +M+ + VT+ S+L AC S
Sbjct: 402 IFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTAS 461
Query: 188 LKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTL 247
++ G + + + + ++D +CGY+ +A + +++ ++ + I W +
Sbjct: 462 IRHAGQIHCSIEKSTFNNDTVIGNS--LIDTYAKCGYIRDALKVFQHL-MERDIISWNAI 518
Query: 248 LSACKTH 254
+S H
Sbjct: 519 ISGYALH 525
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 106/248 (42%), Gaps = 21/248 (8%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + + GS L Y + + E V + ++ + W +++ ++N E+
Sbjct: 192 GHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPEN----- 246
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
FR SCS LA Q IH +K + V +L+ MY++C
Sbjct: 247 ------AFR--------CAQSCSLLAISCARQGIHGCAIKTLNDTEPHVGGALLDMYAKC 292
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + D+ F Y DV+L S MI+ Y + E+A LF ++ + N+ + S+L
Sbjct: 293 GDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVL 352
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC++ + G + + + K + L ++D +C +D + + ++ AN
Sbjct: 353 QACTNMVQLDFGKQIHNHAI-KIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLR-DAN 410
Query: 241 AIIWKTLL 248
+ W T++
Sbjct: 411 EVSWNTIV 418
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 70/155 (45%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
LDL + L +MY K G L ++ MP RN+++++TL+ AQ G E +
Sbjct: 93 RLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRR 152
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
+R G ++ +++ + G +H+ K G + V S LI YS C
Sbjct: 153 LRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSL 212
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEA 157
+ D+ F D V+W++M++ Y + E A
Sbjct: 213 VSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENA 247
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 78/184 (42%), Gaps = 16/184 (8%)
Query: 91 GQQIHAEVVKAGA--SLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAY 148
G+ +H VV+ G LD+ + L++MY + G L + + F ++V + +++ A+
Sbjct: 78 GRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAH 137
Query: 149 GFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPR 208
G E A LF ++ + E N ++L M+ L + +
Sbjct: 138 AQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKL-------AIAMDAAGLAGGVHSCAWK 190
Query: 209 LEH------YTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGR 262
L H + ++D C + +A + N V+ +A++W ++S + + A R
Sbjct: 191 LGHDHNAFVGSGLIDAYSLCSLVSDAEHVF-NGIVRKDAVVWTAMVSCYSENDCPENAFR 249
Query: 263 IAEE 266
A+
Sbjct: 250 CAQS 253
>gi|449450646|ref|XP_004143073.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 337 bits (864), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 166/444 (37%), Positives = 262/444 (59%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G L++ +SL +MY KSG L ++ +P N ++W ++IA + NG A + +D +
Sbjct: 167 GGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYF 226
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
N MR +G D+ T ++++ +C L + IH + G + + ++L+ Y++
Sbjct: 227 NKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKL 286
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L S F E ++D V W++M+A Y HG G EAI LFE M K E + VTF LL
Sbjct: 287 GRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLL 346
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL +G +F++M + Y +PR++HY+C+VDLLGRCG L++A +I+NMP++ N
Sbjct: 347 SACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPN 406
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A +W LL AC+ H + ++ +AE ++ + P D Y++LSN++++++ W+ ++ R
Sbjct: 407 AGVWGALLGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLSNMYSASRSWKDAAKVRAL 466
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
++ER +K+ PG S +E N+ H F +GD+SHP + +I LEEL +++ GY T
Sbjct: 467 LKERGLKRTPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELLGKIRKAGYSSKTEYV 526
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAF----AEHTRGLIVMLPF----------KYISEIKNR 406
+ D++ E KE + HSEKLAIAF ++ LI+ K IS I+ R
Sbjct: 527 LQDVEEEVKEDMINKHSEKLAIAFGLLVSKEGEALIITKNLRICGDCHSTAKLISLIEKR 586
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
II+RD RFHHF +G CSC DYW
Sbjct: 587 TIIIRDPKRFHHFSDGFCSCADYW 610
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 139/295 (47%), Gaps = 7/295 (2%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D G L Y K G + K+ MP +++++W +LI+G ++ L + Y +
Sbjct: 73 DGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFSRC-LHMSLTAFYTMKF 131
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+ +P+++T +S+IS+CS L G+ IH +K G +L+V V +SLI+MY + G L
Sbjct: 132 EMSVKPNEVTILSMISACS--GALDAGKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLT 189
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ + F + V W+S+IAA +G E I+ F +M + E ++ T ++LL AC
Sbjct: 190 SACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACL 249
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H G+ + LM ++ T ++D + G L + + + A+ + W
Sbjct: 250 HLGVGKLAESIHGLMFCT-GFGAKITIATALLDTYAKLGRLSASYGVFTEVGF-ADRVAW 307
Query: 245 KTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEF 297
+L+ H A ++ E + G+ P LLS S +G S F
Sbjct: 308 TAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYF 362
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 110/228 (48%), Gaps = 17/228 (7%)
Query: 32 MPIR--NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKIT--FVSVISSCSELAT 87
MP+R + I + I + Q L + ++L+R P+ I + ++SC ++
Sbjct: 1 MPLRWNSSILYNFFIQSRTQYPLL--LHRSFHLVRQCA-TPEAIVSALLIAVNSCPSISN 57
Query: 88 LGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAA 147
++IHA V K+ D + L++ Y++ G +D++K F + + D+V W+S+I+
Sbjct: 58 C---REIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLIS- 113
Query: 148 YGFHGKGEEAINLFEQME-QKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRK 206
GF ++ F M+ + + N+VT +S++ ACS K + F + V
Sbjct: 114 -GFSRCLHMSLTAFYTMKFEMSVKPNEVTILSMISACSGALDAGKYIHGFGIKVGG---T 169
Query: 207 PRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
++ ++++ G+ G L A L +P N + W ++++A T+
Sbjct: 170 LEVKVANSLINMYGKSGDLTSACRLFEAIP-DPNTVSWNSIIAAQVTN 216
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 337 bits (864), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 184/451 (40%), Positives = 258/451 (57%), Gaps = 29/451 (6%)
Query: 1 GFELDLVAGSSLAHMYMK-SGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQ 59
G+E DLV G+ L +MY K S SL E +V + R+VI W LI Q G A+D LD
Sbjct: 294 GYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDI 353
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ M++ P++IT +V+S+C+ L QG+ +HA + DV + +SL++MY+R
Sbjct: 354 FKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNR 413
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG LDD+V F +V WS++IAAY HG + F ++ Q+ A+DVT VS
Sbjct: 414 CGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVST 473
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L ACSH G+ ++G++ F MV + P H+ C+VDLL R G L+ A LI +MP
Sbjct: 474 LSACSHGGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLP 533
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYV-LLSNIHASAKRWQGVSEFR 298
+A+ W +LLS CK H T A R+A+++ + +D V LLSN++A A RW V R
Sbjct: 534 DAVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDV---R 590
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
+ R +K PG S++EI + VH+F GDKSHP I ++ L+ +MK GYVPD
Sbjct: 591 KTRNRRAARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAGYVPDMR 650
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKY 399
+H++ EEKE L +HSEKLAIA+ GLI P K+
Sbjct: 651 MVLHNVKEEEKEQMLCYHSEKLAIAY-----GLISTPPGTPLHIVKNLRACVDCHAAAKF 705
Query: 400 ISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
IS I R+I+VRD++RFHHF NG CSC DYW
Sbjct: 706 ISRIVGRKIVVRDSTRFHHFENGSCSCKDYW 736
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 143/255 (56%), Gaps = 3/255 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ D + ++L +MY K GSL KV + R+VIAW T+I+G A+ G A L+ +
Sbjct: 193 GYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELF 252
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M +P+ +TF+ ++++C+ L L QG+ IH +V + G D+ + + L++MY++C
Sbjct: 253 QRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKC 312
Query: 121 -GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
L+++ + F DV+ W+ +I AY +G+ ++A+++F+QM+ + N++T ++
Sbjct: 313 SSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNV 372
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L AC+ G K +G L+ R K + ++++ RCG LD+ + + K+
Sbjct: 373 LSACAVLGAKRQGKAVHALIASG-RCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKS 431
Query: 240 NAIIWKTLLSACKTH 254
+ W TL++A H
Sbjct: 432 -LVSWSTLIAAYAQH 445
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 132/253 (52%), Gaps = 6/253 (2%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
E D++ G++L MY + L K M + ++ W LIAG ++NG L Y
Sbjct: 90 LEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQ 149
Query: 62 LM---RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
M G +PD ITF S + +CS + + QG++I A V +G + D V ++LI+MYS
Sbjct: 150 DMVSKSPEGMKPDAITFSSALYACSVVGDISQGREIEARTVASGYASDSIVQNALINMYS 209
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+CG L+ + K F + DV+ W++MI+ Y G +A+ LF++M + + N VTF+
Sbjct: 210 KCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIG 269
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRC-GYLDEAAALIRNMPV 237
LL AC++ E+G VK++ + L ++++ +C L+EA + +
Sbjct: 270 LLTACTNLEDLEQGRAIHR-KVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRT 328
Query: 238 KANAIIWKTLLSA 250
+ + I W L+ A
Sbjct: 329 R-DVITWNILIVA 340
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 132/271 (48%), Gaps = 11/271 (4%)
Query: 15 MYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKIT 74
MY K GS+ + V + N ++W ++A A+NG + L Y M + G RPD
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAG-ASLDVGVISSLISMYSRCGCLDDSVKTFLEC 133
FV I CS L QGQ +HA +++ D+ + ++LI+MY+RC L+ + KTF E
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 134 EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEA---NDVTFVSLLYACSHCGLKE 190
+V W+++IA Y +G A+ +++ M K E + +TF S LYACS G
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDIS 180
Query: 191 KGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
+G E V Y +++ ++++ +CG L+ A + + + + I W T++S
Sbjct: 181 QGREIEARTVASGYASDSIVQN--ALINMYSKCGSLESARKVFDRLKNR-DVIAWNTMIS 237
Query: 250 ACKTHKSTDMAGRIAEEILGVNPQDAAPYVL 280
+ A + + + P D P V+
Sbjct: 238 GYAKQGAATQALELFQRM---GPNDPKPNVV 265
>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Vitis vinifera]
Length = 802
Score = 337 bits (864), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 173/446 (38%), Positives = 257/446 (57%), Gaps = 26/446 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D G++L +Y SGS+ +G K P +V++W +LI G QNG E L ++ +
Sbjct: 363 DEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELL 422
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G +PD+ T ++S+C+ LA + G+QIHA +K G + +S I MY++CG +D
Sbjct: 423 FSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDID 482
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ TF E + D+V WS MI++ HG +EA++LFE M+ N +TF+ +L ACS
Sbjct: 483 SANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACS 542
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL E+G+ +F++M K + P ++H C+VDLLGR G L EA + I + + + ++W
Sbjct: 543 HGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMW 602
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
++LLSAC+ HK+TD R+AE ++ + P+ AA YVLL NI+ A +E R M++R
Sbjct: 603 RSLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDR 662
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
VKKEPG+SW+E+ N VH F GD+SHP S I + LEE+ E+K Y+ +
Sbjct: 663 GVKKEPGLSWIEVGNVVHSFVAGDRSHPNSQVIYVQLEEMLEEIKKLDYIDEKLVSDASE 722
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP--------------------FKYISEIK 404
+ + +HSEKLA+ F I+ LP K S ++
Sbjct: 723 PKHKDNSMVSYHSEKLAVTFG------IISLPRSAPVRVMKNLRSCWHCHETMKLFSRLE 776
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
NREII+RD RFH FR+G CSCGDYW
Sbjct: 777 NREIILRDPIRFHRFRDGSCSCGDYW 802
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 131/263 (49%), Gaps = 15/263 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQ-----NGLAED 55
G +LD+V G++L Y K G L + K+ +LMP NV+ + +IAG Q + A +
Sbjct: 253 GLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANE 312
Query: 56 VLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLIS 115
+ + M+ G +P + TF S++ +CS + G+QIHA++ K D + ++L+
Sbjct: 313 AMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVE 372
Query: 116 MYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVT 175
+YS G ++D +K F DVV W+S+I + +G+ E + LF ++ + ++ T
Sbjct: 373 LYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFT 432
Query: 176 FVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV----VDLLGRCGYLDEAAAL 231
+L AC++ + G + + Y K + ++T + + + +CG +D A
Sbjct: 433 ISIMLSACANLAAVKSGEQ-----IHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMT 487
Query: 232 IRNMPVKANAIIWKTLLSACKTH 254
+ + + W ++S+ H
Sbjct: 488 FKETK-NPDIVSWSVMISSNAQH 509
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 117/253 (46%), Gaps = 24/253 (9%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L +MY K G +K+ MP RNV++W +LI+G Q G +V++ + RM R
Sbjct: 58 NNLLYMYCKCGETDVAKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLR 117
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
DK TF + +S C L G+ IHA + +G V + +SLI MY +CG +D +
Sbjct: 118 LDKFTFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLV 177
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS----- 184
F + D V W+S+IA Y G +E + L +M + N S L AC
Sbjct: 178 FESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSS 237
Query: 185 --HCGLKEKGMEF-----FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
CG G D++V T ++D + G L++A + + MP
Sbjct: 238 SIECGKMLHGCAVKLGLDLDVVVG-----------TALLDTYAKIGDLEDATKIFKLMP- 285
Query: 238 KANAIIWKTLLSA 250
N +++ +++
Sbjct: 286 DPNVVMYNAMIAG 298
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 114/246 (46%), Gaps = 9/246 (3%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+SL MY K G + V + ++W +LIAG + G +++L M G
Sbjct: 159 NSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLN 218
Query: 70 PDKITFVSVISSCSE--LATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV 127
+ S + +C +++ G+ +H VK G LDV V ++L+ Y++ G L+D+
Sbjct: 219 LNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDAT 278
Query: 128 KTFLECEYSDVVLWSSMIAAYGFHGK-----GEEAINLFEQMEQKEFEANDVTFVSLLYA 182
K F +VV++++MIA + EA+ LF +M+ + + ++ TF S+L A
Sbjct: 279 KIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKA 338
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
CS E G + + KY + +V+L G +++ + P K + +
Sbjct: 339 CSTIEAFECGKQ-IHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTP-KLDVV 396
Query: 243 IWKTLL 248
W +L+
Sbjct: 397 SWTSLI 402
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 95/208 (45%), Gaps = 4/208 (1%)
Query: 66 VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD 125
+G D +T+ ++ + +L G+ H ++K + ++++L+ MY +CG D
Sbjct: 13 LGLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDV 72
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
+ K F +VV W+S+I+ Y G E +NLF++ + + TF + L C
Sbjct: 73 AKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGR 132
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
G L+ P L + ++D+ +CG +D A L+ + +++ W
Sbjct: 133 TLDLRLGRLIHALITVSGLGGPVLLTNS-LIDMYCKCGRID-WARLVFESADELDSVSWN 190
Query: 246 TLLSACKTHKSTDMAGRIAEEIL--GVN 271
+L++ S D R+ ++L G+N
Sbjct: 191 SLIAGYVRIGSNDEMLRLLVKMLRHGLN 218
>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 337 bits (864), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 180/450 (40%), Positives = 269/450 (59%), Gaps = 20/450 (4%)
Query: 1 GFELDLVAGSSLAHMYMK-SGSLVEGEKVIRLMPIRNVIAWITLIAG-KAQNGLAEDVLD 58
GF + GS L +Y K +GS+VE KV + +++ W T+I+G L+ED L
Sbjct: 273 GFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAPDLVLWNTMISGFSLYEDLSEDGLW 332
Query: 59 QYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLD-VGVISSLISMY 117
+ M+ GFRPD +FV V S+CS L++ G+Q+HA +K+ + V V ++L++MY
Sbjct: 333 CFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHALAIKSDVPYNRVSVNNALVAMY 392
Query: 118 SRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
S+CG + D+ + F + V +SMIA Y HG E++ LFE M +K+ N +TF+
Sbjct: 393 SKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLRLFELMLEKDIAPNSITFI 452
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
++L AC H G E+G ++F++M +++ +P EHY+C++DLLGR G L EA +I MP
Sbjct: 453 AVLSACVHTGKVEEGQKYFNMMKERFCIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPF 512
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEF 297
+I W TLL AC+ H + ++A + A E L + P +AAPYV+LSN++ASA RW+ +
Sbjct: 513 NPGSIEWATLLGACRKHGNVELAVKAANEFLRLEPYNAAPYVMLSNMYASAARWEEAATV 572
Query: 298 REAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDT 357
+ MRER VKK+PG SW+EI +VH F D SHP EI +Y+ ++ +MK GYVPD
Sbjct: 573 KRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPMIKEIHVYMGKMLKKMKQAGYVPDI 632
Query: 358 GADM---HDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYI 400
+ +++ +E+E L +HSEKLA+AF G+ +++ K I
Sbjct: 633 RWALVKDEEVEPDERERRLLYHSEKLAVAFGLISTEEGVPILVVKNLRICGDCHNAVKLI 692
Query: 401 SEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
S + REI VRD RFH F+ G CSC DYW
Sbjct: 693 SALTGREITVRDTHRFHCFKEGHCSCRDYW 722
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 137/296 (46%), Gaps = 9/296 (3%)
Query: 16 YMKSGSLVEGEKVIRLMPI---RNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDK 72
Y + G L E +V R M R+ ++W +I Q+ + + + M G + D
Sbjct: 184 YSRKGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDM 243
Query: 73 ITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC-GCLDDSVKTFL 131
T SV+++ + + L G+Q H ++K+G + V S LI +YS+C G + + K F
Sbjct: 244 FTMASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFE 303
Query: 132 ECEYSDVVLWSSMIAAYGFHGK-GEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKE 190
E D+VLW++MI+ + + E+ + F +M++ F +D +FV + ACS+
Sbjct: 304 EITAPDLVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPS 363
Query: 191 KGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
G + L +K R+ +V + +CG + +A + MP + N + ++++
Sbjct: 364 LGKQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMP-EHNTVSLNSMIAG 422
Query: 251 CKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
H + R+ E +L + P +LS + K +G F M+ER
Sbjct: 423 YAQHGVEVESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYF-NMMKER 477
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 121/251 (48%), Gaps = 10/251 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
++ + ++L + Y K + +V +P +++++ TLIA A G L + +R
Sbjct: 74 NVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEEVR 133
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+ D T VI++C + +G +Q+H VV G V +++++ YSR G L
Sbjct: 134 ELRLGLDGFTLSGVITACGD--DVGLVRQLHCFVVVCGHDCYASVNNAVLACYSRKGFLS 191
Query: 125 DSVKTFLECEYS---DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
++ + F E D V W++MI A G H +G EA+ LF +M ++ + + T S+L
Sbjct: 192 EARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASVLT 251
Query: 182 ACSHCGLKEKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRC-GYLDEAAALIRNMPVKA 239
A + G +F +M+K + + + ++DL +C G + E + +
Sbjct: 252 AFTCVKDLVGGRQFHGMMIKSGFHGNSHVG--SGLIDLYSKCAGSMVECRKVFEEI-TAP 308
Query: 240 NAIIWKTLLSA 250
+ ++W T++S
Sbjct: 309 DLVLWNTMISG 319
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 43/224 (19%), Positives = 83/224 (37%), Gaps = 54/224 (24%)
Query: 74 TFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLEC 133
TF +++ +C L G+ +HA K+ + + +YS+CG L ++ +F
Sbjct: 11 TFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFHLT 70
Query: 134 EYS-------------------------------DVVLWSSMIAAYGFHGKGEEAINLFE 162
+Y D+V ++++IAAY G+ + LFE
Sbjct: 71 QYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFE 130
Query: 163 QMEQKEFEANDVTFVSLLYACS---------HCGLKEKGMEFFDLMVKKYRRKPRLEHYT 213
++ + + T ++ AC HC + G + + +
Sbjct: 131 EVRELRLGLDGFTLSGVITACGDDVGLVRQLHCFVVVCGHDCYASV------------NN 178
Query: 214 CVVDLLGRCGYLDEAAALIRNMPVKA--NAIIWKTLLSACKTHK 255
V+ R G+L EA + R M + + W ++ AC H+
Sbjct: 179 AVLACYSRKGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHR 222
>gi|296085005|emb|CBI28420.3| unnamed protein product [Vitis vinifera]
Length = 631
Score = 337 bits (864), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 173/446 (38%), Positives = 267/446 (59%), Gaps = 25/446 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
+LV+ +++ + YMKSG ++ MPI +++ W +IAG NG D + + +M
Sbjct: 191 NLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMML 250
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+G RP T VSV+S+ S LA LG+G+ IH+ + K G LD + +SLI MY++CGC++
Sbjct: 251 KLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIE 310
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
++ F + V W+++I G HG A+ LF +M + + N + F+ +L AC+
Sbjct: 311 SALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACN 370
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL + G ++FD+M+ +Y+ +P LEHY C+VD+L R G+L+EA I NMP+ N +IW
Sbjct: 371 HAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIW 430
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
+LL + H D+ A+ ++ V P+ Y+LLSN++A++ W+ VS RE M +R
Sbjct: 431 MSLLGGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKR 490
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
+K+PG S +E K +H+F +GD SHP++ EI + E+ ++K G+VPDT + +
Sbjct: 491 GFRKDPGCSSVEHKGTLHEFIVGDISHPQTKEIYAKMSEMKEKLKCVGHVPDTTQVLLCI 550
Query: 365 DSE-EKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIK 404
+ E EKE L++HSE+LAIAF GLI + P K +S+I
Sbjct: 551 EGEKEKEAELENHSERLAIAF-----GLINVKPGIPIRIMKNLRVCNDCHSVTKLLSKIY 605
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
+REIIVRD RFHHF+NG CSC DYW
Sbjct: 606 SREIIVRDNCRFHHFKNGSCSCMDYW 631
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 122/293 (41%), Gaps = 76/293 (25%)
Query: 35 RNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQI 94
R++I W T+I +N + D + ++ + + + PD T VI C+ L + +G+QI
Sbjct: 79 RSLIHWNTIIKCYVENQFSHDGIVLFHEL-VHEYLPDNFTLPCVIKGCARLGVVQEGKQI 137
Query: 95 HAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTF------------------------ 130
H +K G DV V SL++MYS+CG +D + K F
Sbjct: 138 HGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGNLVSWNA 197
Query: 131 --------------LECEYS----DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEAN 172
LE Y D+V W+ MIA Y +G+ +A+ +F M + +
Sbjct: 198 MINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPS 257
Query: 173 DVTFVSLLYACS-----------HCGLKEKGMEF-------------------FDLMVKK 202
T VS+L A S H +++ G E L V +
Sbjct: 258 HATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFR 317
Query: 203 YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM---PVKANAIIWKTLLSACK 252
+K ++ H+T ++ LG G + A AL M +K NAII+ +L+AC
Sbjct: 318 AIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACN 370
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 102/217 (47%), Gaps = 18/217 (8%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFELD + G+SL MY K G + V R + + V W +I G +G+A L +
Sbjct: 288 GFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALF 347
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVV---KAGASLDVGVISSLISMY 117
M G +P+ I F+ V+++C+ + G+Q ++ K +L+ L+ +
Sbjct: 348 LEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLE--HYGCLVDIL 405
Query: 118 SRCGCLDDSVKTFLECEYS-DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVT- 175
R G L+++ T S + V+W S++ HGK I++ E Q+ E T
Sbjct: 406 CRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGK----IDIGEYAAQRVIEVAPETI 461
Query: 176 ----FVSLLYACSHCGLKEKGMEFFDLMVKK-YRRKP 207
+S +YA S G+ EK ++M K+ +R+ P
Sbjct: 462 GCYILLSNMYAAS--GMWEKVSHVREMMYKRGFRKDP 496
>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
Length = 939
Score = 337 bits (863), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 166/442 (37%), Positives = 268/442 (60%), Gaps = 15/442 (3%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
LDL+ + + +Y + G + + ++ ++++ W +++ A+NGL + + + M
Sbjct: 498 LDLILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKM 557
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
G +PD + V ++ + + L++L +G++IH +++ ++ V+SSL+ MYS CG +
Sbjct: 558 LNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAVVSSLVDMYSGCGSM 617
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
+ ++K F E + DVVLW++MI A G HG G++AI +F++M + + V+F++LLYAC
Sbjct: 618 NYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVSFLALLYAC 677
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
SH L ++G + D+MV KY+ +P EHY CVVDLLGR G +EA I++MP++ +++
Sbjct: 678 SHSKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTEEAYKFIKSMPLEPKSVV 737
Query: 244 WKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
W LL AC+ HK+ ++A +++L + P + YVL+SN+ A +W V E R M E
Sbjct: 738 WCALLGACRIHKNHELAMIATDKLLELEPDNPGNYVLVSNVFAEMGKWNNVKEIRTKMTE 797
Query: 304 RNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRG-YVPDTGADMH 362
+ ++K+P SW+EI N VH FT D SH S I L L E+T +++ G YV DT +H
Sbjct: 798 QGLRKDPACSWIEIGNTVHTFTARDHSHRDSQAIHLKLAEITEKLRREGQYVEDTSFVLH 857
Query: 363 DMDSEEKEYNLKHHSEKLAIAF-------------AEHTRGLIVMLPF-KYISEIKNREI 408
D+ EEK L HSE+LAI+F A++ R F K +S++ REI
Sbjct: 858 DVSEEEKIDLLHRHSERLAISFGLISTASGTPLRIAKNLRVCGDCHEFTKLVSKLFEREI 917
Query: 409 IVRDASRFHHFRNGKCSCGDYW 430
+VRDA+RFHHF G CSCGD+W
Sbjct: 918 VVRDANRFHHFSGGTCSCGDFW 939
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 133/257 (51%), Gaps = 5/257 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLM-PIRNVIAWITLIAGKAQNGLAEDVLDQ 59
G + + ++L MY K G L +V M R+V +W + I+G QNG+ + LD
Sbjct: 193 GLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDL 252
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ M+ GF + T V V+ C+ELA L G+++HA ++K G ++ ++L+ MY+R
Sbjct: 253 FRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEFNIQC-NALLVMYAR 311
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG +D +++ F E D + W+SM++ Y + EAI+ F +M Q F + VSL
Sbjct: 312 CGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSL 371
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L A H G G E VK+ R L+ ++D+ +C ++ +A + M +K
Sbjct: 372 LSAVGHLGRLINGREVHAYAVKQ-RLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIK- 429
Query: 240 NAIIWKTLLSACKTHKS 256
+ + W T++ AC S
Sbjct: 430 DHVSWTTII-ACYAQSS 445
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 139/304 (45%), Gaps = 14/304 (4%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR----M 65
+ L MY K G L + ++ MP R V +W LI +G A + + Y MR +
Sbjct: 97 TKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPV 156
Query: 66 VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD 125
G PD T SV+ +C G ++H VK+G V ++L+ MY++CG LD
Sbjct: 157 AGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDS 216
Query: 126 SVKTF-LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+++ F + DV W+S I+ +G EA++LF +M+ F N T V +L C+
Sbjct: 217 ALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCA 276
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
G E ++ K + ++ +V + RCG++D A + R + K + I W
Sbjct: 277 ELAQLNHGRELHAALL-KCGTEFNIQCNALLV-MYARCGWVDSALRVFREIGDK-DYISW 333
Query: 245 KTLLSACKTHK----STDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
++LS ++ + D G + + G NP A LLS + + G A
Sbjct: 334 NSMLSCYVQNRLYAEAIDFFGEMVQN--GFNPDHACIVSLLSAVGHLGRLINGREVHAYA 391
Query: 301 MRER 304
+++R
Sbjct: 392 VKQR 395
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 137/281 (48%), Gaps = 9/281 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
DL ++L MY+K S+ +V M I++ ++W T+IA AQ+ + + ++ +
Sbjct: 399 DLQIANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQ 458
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G + D + S++ +CS L ++ +Q+H+ ++ G LD+ + + +I +Y CG +
Sbjct: 459 KEGIKVDPMMMGSILEACSGLKSISLLKQVHSYAIRNGL-LDLILKNRIIDIYGECGEVC 517
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
++ F + D+V W+SM+ + +G EA+ LF +M + + V V +L A +
Sbjct: 518 YALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIA 577
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEH--YTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
KG E ++ R K +E + +VD+ CG ++ A + K + +
Sbjct: 578 GLSSLTKGKEIHGFLI---RGKFPVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCK-DVV 633
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLL 281
+W +++A H A I + +L GV+P + LL
Sbjct: 634 LWTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVSFLALL 674
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 133/290 (45%), Gaps = 31/290 (10%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L MY + G + +V R + ++ I+W ++++ QN L + +D + M GF
Sbjct: 303 NALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFN 362
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
PD VS++S+ L L G+++HA VK D+ + ++L+ MY +C ++ S +
Sbjct: 363 PDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARV 422
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F D V W+++IA Y + EAI F +++ + + + S+L ACS GLK
Sbjct: 423 FDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACS--GLK 480
Query: 190 EKGM-----------EFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+ DL++K ++D+ G CG + A + M K
Sbjct: 481 SISLLKQVHSYAIRNGLLDLILKNR-----------IIDIYGECGEVCYALNIF-EMLDK 528
Query: 239 ANAIIWKTLLSACK----THKSTDMAGRIAEEILGVNPQDAAPYVLLSNI 284
+ + W ++++ H++ + G++ G+ P A +L I
Sbjct: 529 KDIVTWTSMVNCFAENGLLHEAVALFGKMLNA--GIQPDSVALVGILGAI 576
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 90/215 (41%), Gaps = 23/215 (10%)
Query: 44 IAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGA 103
+A ++ G A D Y + + V+V + SE G+Q+HA V GA
Sbjct: 42 LAARSARGRAPPPTDHYGWV---------LDLVAVRRAVSE------GRQLHAHAVATGA 86
Query: 104 --SLDVGVISS-LISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINL 160
D G +++ L+ MY +CG L D+ + F V W+++I A G EA+ +
Sbjct: 87 LGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGACLSSGGAGEAVGV 146
Query: 161 FEQMEQKEFEA----NDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVV 216
+ M E A + T S+L AC G G E L VK + L +V
Sbjct: 147 YRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLV-ANALV 205
Query: 217 DLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSAC 251
+ +CG LD A + M + W + +S C
Sbjct: 206 GMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGC 240
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 43/91 (47%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F ++ SSL MY GS+ KV ++V+ W +I +G + + +
Sbjct: 597 FPVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFK 656
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQ 92
M G PD ++F++++ +CS + +G+
Sbjct: 657 RMLETGVSPDHVSFLALLYACSHSKLVDEGK 687
>gi|242079983|ref|XP_002444760.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
gi|241941110|gb|EES14255.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
Length = 650
Score = 337 bits (863), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 180/444 (40%), Positives = 261/444 (58%), Gaps = 16/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + D+ SSL YMK G L G +V M R+++ W ++IAG AQ+G ++ +
Sbjct: 209 GLDSDVFVRSSLIDAYMKLGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELF 268
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ GF ++ T SV+ +C+ + L G+Q+HA V+K D+ + ++L+ MY +C
Sbjct: 269 MRMKDAGFSANQGTLTSVLRACTGMVMLEAGRQVHAHVLKY--ERDLILHNALLDMYCKC 326
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L+D+ F DV+ WS+MI+ +GK EA+ +F+ M+ + N +T V +L
Sbjct: 327 GSLEDAEALFHRMPQRDVISWSTMISGLAQNGKSAEALRVFDLMKSEGVAPNRITMVGVL 386
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
+ACSH GL E G +F M K + +P EH+ C+VDLLGR G LDEA IR+M ++ +
Sbjct: 387 FACSHAGLVEDGWYYFRSMKKLFGIQPEREHHNCMVDLLGRAGKLDEAVEFIRDMNLEPD 446
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A+IW+TLL AC+ HKS ++A A EIL + P D VLLSN +A ++W + +A
Sbjct: 447 AVIWRTLLGACRMHKSGNLAAYAAREILKLEPDDQGARVLLSNTYADLRQWTDAEKSWKA 506
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
MR+R +KKEPG SW+E++ VH F GD SHP S I L L + GYVP T
Sbjct: 507 MRDRGMKKEPGRSWIELEKHVHVFIAGDLSHPCSDTIVQELNRLIGRISALGYVPQTEFV 566
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAE-HTRG---LIVMLPF----------KYISEIKNR 406
+ D+ E+KE LK+HSEK+AIAF H G + +M K +S+ + R
Sbjct: 567 LQDLAIEQKEDLLKYHSEKMAIAFGTMHAVGGKPIRIMKNLRICGDCHAFAKLVSKSEGR 626
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
II+RD RFHHF++G CSCGDYW
Sbjct: 627 MIIIRDPVRFHHFQDGACSCGDYW 650
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 90/255 (35%), Positives = 130/255 (50%), Gaps = 8/255 (3%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQ-NGLAEDVLDQYNLMRMVGF 68
+SL MY K G L + ++ MP RNV+ W T++A A +G E+ L M G
Sbjct: 119 NSLVSMYAKFGLLDDALRLFDRMPERNVVTWTTVVAALANADGRKEEALRFLVAMWRDGV 178
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
P+ TF SV+ +C T G +HA VK G DV V SSLI Y + G LD +
Sbjct: 179 APNAYTFSSVLGAC---GTPGVLAALHASTVKVGLDSDVFVRSSLIDAYMKLGDLDGGRR 235
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F E D+V+W+S+IA + G G AI LF +M+ F AN T S+L AC+ +
Sbjct: 236 VFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACTGMVM 295
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
E G + V KY R L + ++D+ +CG L++A AL MP + + I W T++
Sbjct: 296 LEAGRQVH-AHVLKYERD--LILHNALLDMYCKCGSLEDAEALFHRMPQR-DVISWSTMI 351
Query: 249 SACKTHKSTDMAGRI 263
S + + A R+
Sbjct: 352 SGLAQNGKSAEALRV 366
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 63/129 (48%), Gaps = 9/129 (6%)
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEV--------VKAGASLDVGVISSLISMYSRC 120
R D ++ ++ C T G G+ IH V GA + V +SL+SMY++
Sbjct: 69 RADPVSLTRLVKLCVRHGTAGDGRLIHRHVEAHGQLSHYSGGAGGGIFVSNSLVSMYAKF 128
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYG-FHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G LDD+++ F +VV W++++AA G+ EEA+ M + N TF S+
Sbjct: 129 GLLDDALRLFDRMPERNVVTWTTVVAALANADGRKEEALRFLVAMWRDGVAPNAYTFSSV 188
Query: 180 LYACSHCGL 188
L AC G+
Sbjct: 189 LGACGTPGV 197
>gi|222632633|gb|EEE64765.1| hypothetical protein OsJ_19621 [Oryza sativa Japonica Group]
Length = 656
Score = 337 bits (863), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 171/443 (38%), Positives = 261/443 (58%), Gaps = 14/443 (3%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
EL++ GS+L MY K E +V ++P +N+++W ++ QN L ED L +
Sbjct: 214 LELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKNIVSWTAIMTAYTQNELFEDALQLFL 273
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M M G RP++ T+ ++SC+ LATL G + A +K G + V ++L++MYS+ G
Sbjct: 274 DMEMEGVRPNEFTYAVALNSCAGLATLKNGNALGACTMKTGHWGLLPVCNALMNMYSKSG 333
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
++D+ + FL DVV W+S+I Y HG+ EA+ F M E + VTF+ +L
Sbjct: 334 SVEDARRVFLSMPCRDVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLS 393
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
AC+ GL ++G + ++M+K+ KP EHYTC+V LL R G LDEA I + + +
Sbjct: 394 ACAQLGLVDEGFYYLNIMMKEVGVKPGKEHYTCMVGLLCRVGRLDEAERFIESNCIGTDV 453
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
+ W++LLS+C+ +++ + R+AE+I + P+D YVLLSN++A A RW GV + R M
Sbjct: 454 VAWRSLLSSCQVYRNYGLGHRVAEQIFQLKPKDVGTYVLLSNMYAKANRWDGVVKVRRLM 513
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
RE V+KEPGVSW+++ ++VH FT DK HP +I L+EL ++K+ GYVP+ +
Sbjct: 514 RELGVRKEPGVSWIQVGSEVHVFTSEDKKHPYMEQITKKLQELIDKIKVIGYVPNIAVAL 573
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFA----EHTRGLIVM----------LPFKYISEIKNRE 407
HD++ E+KE +L +HSEKLA+AF + +M + K IS R
Sbjct: 574 HDVEDEQKEEHLMYHSEKLALAFGLIRTPKGEAIRIMKNVRICDDCHVAIKLISLATGRR 633
Query: 408 IIVRDASRFHHFRNGKCSCGDYW 430
I+VRD RFH +G CSC DYW
Sbjct: 634 IVVRDTVRFHCIEDGVCSCDDYW 656
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 110/249 (44%), Gaps = 40/249 (16%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
D+V ++L +Y+K G L +V MP RN ++ L++G A +G D L L+
Sbjct: 48 FDVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMSGYASSGRHRDAL---ALL 104
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
R+ F ++ S +++ + + + G+Q H +KAG + V S+++ MY +C +
Sbjct: 105 RVADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHPYVCSAVLHMYCQCAHM 164
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
D++VK YS HG+ A+ +L
Sbjct: 165 DEAVK------YSKK------------HGEKCRAM-------------GSCVICRVL--- 190
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHY--TCVVDLLGRCGYLDEAAALIRNMPVKANA 241
HC ++ + + + +R+ L Y + +VD+ G+C + EA + +P K N
Sbjct: 191 GHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEK-NI 249
Query: 242 IIWKTLLSA 250
+ W +++A
Sbjct: 250 VSWTAIMTA 258
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 81/171 (47%), Gaps = 2/171 (1%)
Query: 78 VISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSD 137
V+ C+ + G Q+H + +K L+V V S+L+ MY +C ++ + F +
Sbjct: 189 VLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKN 248
Query: 138 VVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFD 197
+V W++++ AY + E+A+ LF ME + N+ T+ L +C+ + G
Sbjct: 249 IVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSCAGLATLKNG-NALG 307
Query: 198 LMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
K L ++++ + G +++A + +MP + + + W +++
Sbjct: 308 ACTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCR-DVVSWNSII 357
>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1067
Score = 337 bits (863), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 176/442 (39%), Positives = 267/442 (60%), Gaps = 16/442 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIR-NVIAWITLIAGKAQNGLAEDVLDQYNLM 63
D ++L Y K G + E + M R + ++W ++I+G N L +D M
Sbjct: 626 DTAIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFM 685
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
G R D TF +V+S+C+ +ATL +G ++H V+A D+ + S+L+ MY++CG +
Sbjct: 686 MQKGQRLDGFTFATVLSACATVATLERGMEVHGCSVRACLESDIVIGSALVDMYAKCGRI 745
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
D + + F ++ W+SMI+ Y HG G ++++LF QM+ + + VTFV +L AC
Sbjct: 746 DYASRFFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSAC 805
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
SH GL +G FD M + Y PR+EH++C+VDLLGR G L++ + MPVK N +I
Sbjct: 806 SHAGLVNEGFSHFDSMSEIYGLAPRMEHFSCMVDLLGRVGELNKMEDFLNQMPVKPNVLI 865
Query: 244 WKTLLSAC--KTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
W+T+L AC ++T + R AE +L + P +A Y+LLSN++AS +W V++ R AM
Sbjct: 866 WRTVLGACCRANGRNTALGRRAAEMLLEMEPTNAVNYILLSNMYASGGKWDDVAKTRVAM 925
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
R+ VKKE G SW+ +K+ VH F GDKSHP I L+EL +M+L GY+P+T +
Sbjct: 926 RKAFVKKEAGCSWVTMKDGVHVFVAGDKSHPEKDLIYEKLKELNGKMRLAGYIPETRFAL 985
Query: 362 HDMDSEEKEYNLKHHSEKLAIAF--AEHTRGLIVML-----------PFKYISEIKNREI 408
+D++ E KE L +HSEK+A+AF ++ I +L FKYIS+I R+I
Sbjct: 986 YDLEGESKEELLSYHSEKIAVAFVLTRPSKMPIRILKNLRVCGDCHSAFKYISQIVERQI 1045
Query: 409 IVRDASRFHHFRNGKCSCGDYW 430
++RD++RFHHF NGKCSCGD+W
Sbjct: 1046 VLRDSNRFHHFENGKCSCGDFW 1067
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 169/390 (43%), Gaps = 58/390 (14%)
Query: 6 LVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRM 65
+ G+ L +MY K G++ + V RLM ++ + W ++I G QN + + + MR
Sbjct: 424 IAIGNGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRR 483
Query: 66 VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD 125
P T +S +SSC+ L + G+Q+H E +K G LDV V ++L+++Y CG + +
Sbjct: 484 TELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKE 543
Query: 126 SVKTF-LECEYSDVVLWSSMIAAYGFHGKGE-EAINLFEQMEQKEFEANDVTFVSLLYAC 183
K F L +Y D V W+S+I A EA+ F M + ++ N VTF+++L A
Sbjct: 544 CQKAFSLMLDY-DHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAV 602
Query: 184 SHCGLKEKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
S L E G + L++K+ +E+ ++ G+CG + + M + + +
Sbjct: 603 SSLSLHELGKQIHALVLKRNVAADTAIEN--ALLACYGKCGDMGYCENIFSRMSDRQDEV 660
Query: 243 IWK-----------------------------------TLLSACKTHKSTDMAGRI-AEE 266
W T+LSAC T + + +
Sbjct: 661 SWNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFATVLSACATVATLERGMEVHGCS 720
Query: 267 ILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTM 326
+ D L +++A R S F E M RN+ SW + + +
Sbjct: 721 VRACLESDIVIGSALVDMYAKCGRIDYASRFFEMMPARNL-----YSWNSMISGYARHGH 775
Query: 327 GDKSHPRSMEIDLYLEELTSEMKLRGYVPD 356
G KS +DL+ ++MKL+G +PD
Sbjct: 776 GTKS------LDLF-----AQMKLQGPLPD 794
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 155/309 (50%), Gaps = 11/309 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAE-DVLDQ 59
G +LD+ ++L +Y + G + E +K LM + ++W +LI A + + + ++
Sbjct: 520 GLDLDVSVSNALLALYGECGYVKECQKAFSLMLDYDHVSWNSLIGALADSEPSMLEAVES 579
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ +M G+ P+++TF++++++ S L+ G+QIHA V+K + D + ++L++ Y +
Sbjct: 580 FLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQIHALVLKRNVAADTAIENALLACYGK 639
Query: 120 CGCLDDSVKTFLE-CEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
CG + F + D V W+SMI+ Y + +A+++ M QK + TF +
Sbjct: 640 CGDMGYCENIFSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFAT 699
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+L AC+ E+GME V+ + + + +VD+ +CG +D A+ MP +
Sbjct: 700 VLSACATVATLERGMEVHGCSVRAC-LESDIVIGSALVDMYAKCGRIDYASRFFEMMPAR 758
Query: 239 ANAIIWKTLLSACKTH----KSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGV 294
N W +++S H KS D+ ++ ++ G P +LS + +G
Sbjct: 759 -NLYSWNSMISGYARHGHGTKSLDLFAQM--KLQGPLPDHVTFVGVLSACSHAGLVNEGF 815
Query: 295 SEFREAMRE 303
S F ++M E
Sbjct: 816 SHF-DSMSE 823
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 104/213 (48%), Gaps = 11/213 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF DL ++L ++Y + G L G KV MP+RN+++W LI+G +N + + + +
Sbjct: 103 GFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTRNRMPNEACELF 162
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQ--GQQIHAEVVKAGASLDVGVISSLISMYS 118
M GF P+ F SVI +C E G G QIH + K DV + LISMY
Sbjct: 163 RKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDVTASNVLISMYG 222
Query: 119 RC-GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE-----FEAN 172
G +D + + F ++V +SMI+ Y G A ++F M QKE + N
Sbjct: 223 NALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTM-QKEVMGDGLKPN 281
Query: 173 DVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRR 205
+ TF SL+ A C L G+ + ++ + +
Sbjct: 282 EYTFGSLISAT--CSLANSGLVLLEQLLTRVEK 312
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 126/256 (49%), Gaps = 10/256 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF DL GS+L + K+GS+ + + + M RNV++ LI G + E+ ++ +
Sbjct: 314 GFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELF 373
Query: 61 NLMR-MVGFRPDKITFVSVISSCSELATLGQGQ----QIHAEVVKAG-ASLDVGVISSLI 114
M+ V P+ +++ ++++ E L G+ ++HA ++++G + + + + LI
Sbjct: 374 MEMKDSVELNPN--SYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLI 431
Query: 115 SMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDV 174
+MY++CG ++D+ F + D V W+SMI + + EA+ F++M + E ++
Sbjct: 432 NMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNF 491
Query: 175 TFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRN 234
T +S L +C+ G G E K + ++ L G CGY+ E
Sbjct: 492 TMISALSSCASLGWISVG-EQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSL 550
Query: 235 MPVKANAIIWKTLLSA 250
M + + + W +L+ A
Sbjct: 551 M-LDYDHVSWNSLIGA 565
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 134/274 (48%), Gaps = 13/274 (4%)
Query: 5 DLVAGSSLAHMYMKSGSLVE-GEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
D+ A + L MY + +V+ + + RN+++ ++I+ Q G A D ++ M
Sbjct: 210 DVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTM 269
Query: 64 RMV----GFRPDKITFVSVISSCSELATLGQG--QQIHAEVVKAGASLDVGVISSLISMY 117
+ G +P++ TF S+IS+ LA G +Q+ V K+G D+ V S+L+S +
Sbjct: 270 QKEVMGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSGFLHDLYVGSALVSGF 329
Query: 118 SRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
++ G + + F + Y +VV + +I +GEEA+ LF +M + E N +++
Sbjct: 330 AKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEM-KDSVELNPNSYM 388
Query: 178 SLLYACSHCGL----KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIR 233
+L A + K KG E +++ ++ ++++ +CG +++A + R
Sbjct: 389 IILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFR 448
Query: 234 NMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEI 267
M K +++ W ++++ +K A + +E+
Sbjct: 449 LMDNK-DSVTWNSMITGLDQNKQFLEAVKTFQEM 481
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Query: 91 GQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGF 150
+++H ++ K G D+ + ++LI++Y+R G L K F E ++V WS +I+ Y
Sbjct: 92 AEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTR 151
Query: 151 HGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
+ EA LF +M F N F S++ AC CG E G++F
Sbjct: 152 NRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECG--EYGLKF 194
>gi|302791503|ref|XP_002977518.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
gi|300154888|gb|EFJ21522.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
Length = 652
Score = 337 bits (863), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 170/452 (37%), Positives = 272/452 (60%), Gaps = 29/452 (6%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E DL+A +++ Y +G L ++ + MP R++I+W T++A +N L E+ + ++
Sbjct: 206 ERDLIAWTAMLSAYAFNGHLRYTREIFQRMPERDLISWATMVAALVENDLLEESKELFDR 265
Query: 63 MRM-----VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMY 117
M G P+++TF++++ +CS L L +G++IHA V + G D+ V ++L++ Y
Sbjct: 266 MPRHCALSKGMTPNRVTFITLLDACSFLGALAEGRKIHAAVAERGFDTDLVVSNALVNFY 325
Query: 118 SRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
RCG L D+ F DV+ WSSMI+A+ G+ +EA+ L+ +M + +D+ F+
Sbjct: 326 GRCGALGDAKIVFDGMRRRDVISWSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFI 385
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
S+L+ACS+ G+ E +FF +V + +P LEHY C+VD+LGR G L +A L+R MP
Sbjct: 386 SVLFACSNSGVVEASGDFFRSIVGDTQVEPTLEHYACMVDVLGRAGKLRDAEDLLRLMPF 445
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEF 297
+++ T+LSACK + + AE + ++P++++PY+ L+NI+++AKR + +
Sbjct: 446 HPGPLLYMTMLSACKLYTDVERGEAAAEVVFELDPENSSPYITLANIYSAAKRPKDAARI 505
Query: 298 REAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDT 357
R+ M ER +KK+PG SW+E+ ++VH+F GDK HP+ EI ++ L +MK GY DT
Sbjct: 506 RKLMEERGIKKKPGCSWIEVLDRVHEFIAGDKMHPQRDEIYAEIQRLGRQMKEAGYFQDT 565
Query: 358 GADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FK 398
+ D++ +EKE L +HSEKLAIAF GLI P K
Sbjct: 566 KVVLQDVEEDEKENLLWYHSEKLAIAF-----GLISTPPGAPLRIVKNLRVCSDCHAATK 620
Query: 399 YISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
IS++ REI+VRD +RFHHF+NG CSC DYW
Sbjct: 621 VISKVTGREILVRDTNRFHHFQNGMCSCNDYW 652
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 132/313 (42%), Gaps = 54/313 (17%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN- 61
E DL+A + + + ++ + + MP R+++AW ++A A+ G E+ + ++
Sbjct: 82 ERDLIAWTIMLTVLATFSNIEDAKYHFDQMPERDLVAWTAMLAANAERGQMENARETFDQ 141
Query: 62 -----------LMRMVGFRPDKITFVSVISSCSELATLG-----QGQQIHAEVVKAGASL 105
L+ G D V S E + G + +VV+A +
Sbjct: 142 MPERNLFSWTSLLSAYGRSGDVKAAGRVFDSMPEWNLVAWTAMLTGYSLSGDVVRAKRAF 201
Query: 106 ------DVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAIN 159
D+ ++++S Y+ G L + + F D++ W++M+AA + EE+
Sbjct: 202 DSMPERDLIAWTAMLSAYAFNGHLRYTREIFQRMPERDLISWATMVAALVENDLLEESKE 261
Query: 160 LFEQMEQ-----KEFEANDVTFVSLLYACS-----------HCGLKEKGMEFFDLMVKKY 203
LF++M + K N VTF++LL ACS H + E+G + DL+V
Sbjct: 262 LFDRMPRHCALSKGMTPNRVTFITLLDACSFLGALAEGRKIHAAVAERGFD-TDLVVS-- 318
Query: 204 RRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRI 263
+V+ GRCG L +A + M + + I W +++SA D A +
Sbjct: 319 ---------NALVNFYGRCGALGDAKIVFDGMR-RRDVISWSSMISAFAQRGRVDEAMEL 368
Query: 264 AEEIL--GVNPQD 274
+L G P D
Sbjct: 369 YHRMLSEGTLPDD 381
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 33/192 (17%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ DLV ++L + Y + G+L + + V M R+VI+W ++I+ AQ G ++ ++ Y
Sbjct: 310 GFDTDLVVSNALVNFYGRCGALGDAKIVFDGMRRRDVISWSSMISAFAQRGRVDEAMELY 369
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M G PD I F+SV+ +CS ++ VV+A ++
Sbjct: 370 HRMLSEGTLPDDIIFISVLFACS-----------NSGVVEASGDFFRSIVG--------- 409
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
D V+ LE ++ M+ G GK +A +L M F + ++++L
Sbjct: 410 ---DTQVEPTLEH-------YACMVDVLGRAGKLRDAEDLLRLM---PFHPGPLLYMTML 456
Query: 181 YACSHCGLKEKG 192
AC E+G
Sbjct: 457 SACKLYTDVERG 468
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 111/236 (47%), Gaps = 18/236 (7%)
Query: 15 MYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKIT 74
+Y +SG L + V MP ++ +W L++ A +G E+ ++ M+ D I
Sbjct: 32 IYARSGDLSNAKGVFDRMPRWSLGSWTALLSAFALSGHHEEAKTLFDTMQ----ERDLIA 87
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
+ +++ + + + + + H + + D+ +++++ + G ++++ +TF +
Sbjct: 88 WTIMLTVLATFSNI-EDAKYHFDQMP---ERDLVAWTAMLAANAERGQMENARETFDQMP 143
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGME 194
++ W+S+++AYG G + A +F+ M E N V + ++L S G +
Sbjct: 144 ERNLFSWTSLLSAYGRSGDVKAAGRVFDSMP----EWNLVAWTAMLTGYSLSGDVVRAKR 199
Query: 195 FFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
FD M ++ L +T ++ G+L + + MP + + I W T+++A
Sbjct: 200 AFDSMPER-----DLIAWTAMLSAYAFNGHLRYTREIFQRMPER-DLISWATMVAA 249
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 105/251 (41%), Gaps = 27/251 (10%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L + SG E + + M R++IAW ++ A ED ++ M
Sbjct: 58 TALLSAFALSGHHEEAKTLFDTMQERDLIAWTIMLTVLATFSNIEDAKYHFDQMP----E 113
Query: 70 PDKITFVSVISSCSELATLGQGQQIHA-EVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
D + + +++++ +E +GQ +A E ++ +SL+S Y R G + + +
Sbjct: 114 RDLVAWTAMLAANAE-----RGQMENARETFDQMPERNLFSWTSLLSAYGRSGDVKAAGR 168
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F ++V W++M+ Y G A F+ M +++ + + ++L A + G
Sbjct: 169 VFDSMPEWNLVAWTAMLTGYSLSGDVVRAKRAFDSMPERDL----IAWTAMLSAYAFNGH 224
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP--------VKAN 240
E F M ++ L + +V L L+E+ L MP + N
Sbjct: 225 LRYTREIFQRMPER-----DLISWATMVAALVENDLLEESKELFDRMPRHCALSKGMTPN 279
Query: 241 AIIWKTLLSAC 251
+ + TLL AC
Sbjct: 280 RVTFITLLDAC 290
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 76/181 (41%), Gaps = 33/181 (18%)
Query: 97 EVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEE 156
++ A A D ++S+Y+R G L ++ F + W+++++A+ G EE
Sbjct: 13 QIFDAIADRDSFSWGIMLSIYARSGDLSNAKGVFDRMPRWSLGSWTALLSAFALSGHHEE 72
Query: 157 AINLFEQMEQKEF---------------------------EANDVTFVSLLYACSHCGLK 189
A LF+ M++++ E + V + ++L A + G
Sbjct: 73 AKTLFDTMQERDLIAWTIMLTVLATFSNIEDAKYHFDQMPERDLVAWTAMLAANAERGQM 132
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
E E FD M ++ L +T ++ GR G + A + +MP + N + W +L+
Sbjct: 133 ENARETFDQMPER-----NLFSWTSLLSAYGRSGDVKAAGRVFDSMP-EWNLVAWTAMLT 186
Query: 250 A 250
Sbjct: 187 G 187
>gi|359489486|ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Vitis vinifera]
Length = 786
Score = 337 bits (863), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 171/449 (38%), Positives = 255/449 (56%), Gaps = 52/449 (11%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE + ++L MY K G V M ++VI+W +L+ G NG E+ L +
Sbjct: 371 GFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLF 430
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
MR++G PD+I +V+S+C+EL L G+Q+HA +K+G + V +SL+SMY++C
Sbjct: 431 CEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKC 490
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
GC++D+ K F E DV+ W+++I Y +G+G +
Sbjct: 491 GCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRD------------------------ 526
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
H GL E G +F M + Y KP EHY C++DLLGR G L EA L+ M V+ +
Sbjct: 527 ----HAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPD 582
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A +WK LL+AC+ H + ++ R A + + P++A PYVLLSN++++A +W+ ++ R
Sbjct: 583 ATVWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRL 642
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+ R V KEPG SW+E+ ++VH+F D+SHPR+ EI ++E+ +K GYVPD
Sbjct: 643 MKLRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFA 702
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
+HDMD E KE L +HSEKLA+AF GL+ M P KY+S
Sbjct: 703 LHDMDEEGKELGLAYHSEKLAVAF-----GLLTMPPGAPIRIFKNLRICGDCHTAMKYVS 757
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+ +R +I+RD++ FHHFR G CSC DYW
Sbjct: 758 GVFHRHVILRDSNCFHHFREGACSCSDYW 786
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 143/284 (50%), Gaps = 5/284 (1%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMP-IRNVIAWITLIAGKAQNGLAEDVLDQY 60
F+ + + L MY K ++E E + L P RN + W ++ G +QNG ++ +
Sbjct: 169 FDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECF 228
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
MR G ++ TF S++++C ++ G G Q+H +V++G +V V S+L+ MYS+C
Sbjct: 229 RDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKC 288
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L ++ + E D V W+SMI G GEEA++LF M + + ++ T+ S+L
Sbjct: 289 GDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVL 348
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
S M L+VK +L + +VD+ + GY D A + M K +
Sbjct: 349 NCFSFVMDMRNAMSVHSLIVKTGFEAYKLVN-NALVDMYAKRGYFDYAFDVFEKMTDK-D 406
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEE--ILGVNPQDAAPYVLLS 282
I W +L++ C + S + A R+ E I+G++P +LS
Sbjct: 407 VISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLS 450
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 128/251 (50%), Gaps = 9/251 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D + +++ Y SG L E K+ PIR+ I W +LI+G + G + L+ + M+
Sbjct: 71 DECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQ 130
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G RP++ T+ SV+ CS L +G+QIHA +K + V++ L+ MY++C C+
Sbjct: 131 YEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCIL 190
Query: 125 DSVKTF-LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
++ F L + + VLW++M+ Y +G G +AI F M + E N TF S+L AC
Sbjct: 191 EAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTAC 250
Query: 184 ---SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
S CG G + +V+ + + +VD+ +CG L A ++ M V +
Sbjct: 251 GSISACGF---GAQVHGCIVRS-GFGANVFVGSALVDMYSKCGDLSNARRMLETMEVD-D 305
Query: 241 AIIWKTLLSAC 251
+ W +++ C
Sbjct: 306 PVSWNSMIVGC 316
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 72/169 (42%), Gaps = 32/169 (18%)
Query: 113 LISMYSRCGCLDDSVKTF------LECEYSDV-------------------------VLW 141
++S S+CG +DD+ K F EC ++ + + W
Sbjct: 47 VLSNLSKCGRVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITW 106
Query: 142 SSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVK 201
SS+I+ Y +G EA+ LF +M+ + N T+ S+L CS L EKG + +K
Sbjct: 107 SSLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIK 166
Query: 202 KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
T +VD+ +C + EA L P K N ++W +++
Sbjct: 167 TQFDSNAFV-VTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTG 214
>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Brachypodium distachyon]
Length = 874
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 175/442 (39%), Positives = 262/442 (59%), Gaps = 25/442 (5%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G++L Y K G+ E + +++ ++V+AW +++ +Q G + + + M M G
Sbjct: 438 GTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGM 497
Query: 69 RPDKITFVSVISSC-SELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV 127
+P++ T S I +C S A + QG+Q HA +K + V S+L++MY+R G +D +
Sbjct: 498 KPNEFTISSAIDACASPTAGIDQGRQFHAISIKYRYQDAICVGSALVTMYARKGSIDSAR 557
Query: 128 KTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCG 187
F D+V W+SMI+ Y HG +EA++ F QME E + TF++++ C+H G
Sbjct: 558 IVFERQTDRDLVSWNSMISGYAQHGYSKEALDTFRQMETVGIEMDGATFLAVIVGCTHAG 617
Query: 188 LKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTL 247
L ++G ++FD MV + P +EHY+C+VDL R G LDE LI MP A A++W+TL
Sbjct: 618 LVKEGQQYFDSMVMDHNISPTMEHYSCMVDLYSRAGKLDETMNLIEGMPFPAGAMVWRTL 677
Query: 248 LSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVK 307
L AC+ HK+ ++ A+++L + P D+A YVLLSNI+A+A RW+ E R+ M + VK
Sbjct: 678 LGACRVHKNVELGKLAAQKLLLLEPDDSATYVLLSNIYAAAGRWKERDEVRKLMDSKKVK 737
Query: 308 KEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSE 367
KE G SW++IKN+VH F DKSHP S +I L+ +T+ +K GY P+T +HD+ E
Sbjct: 738 KEAGCSWIQIKNKVHSFIACDKSHPLSEQIYAKLKAMTTRLKQEGYCPNTSVVLHDIAEE 797
Query: 368 EKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREI 408
+KE L HSE+LA+AF GLI P K +S I++REI
Sbjct: 798 QKETMLVMHSERLALAF-----GLIATPPRTPLQIVKNLRVCGDCHMVMKMVSLIEDREI 852
Query: 409 IVRDASRFHHFRNGKCSCGDYW 430
I+RD SRFHHF G CSCGD+W
Sbjct: 853 IMRDCSRFHHFNAGACSCGDFW 874
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 143/291 (49%), Gaps = 17/291 (5%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G++L MYMK G + +G V MP RNV+ W +L+ G Q DV+ + MR G
Sbjct: 138 GTALVDMYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGV 197
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
P+ TF SV+S+ + + G+++HA+ VK G V V +SLI+MYS+CG ++++
Sbjct: 198 WPNPFTFTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKA 257
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F + E D+V W++++A + EA+ LF + + T+ +++ C++ L
Sbjct: 258 VFRQMETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCAN--L 315
Query: 189 KEKGM-EFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTL 247
K+ + V K+ T ++D +CG LD+A + MP N + W +
Sbjct: 316 KQLALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAM 375
Query: 248 LSACKTHKSTDMAG----RIAEEILGVNPQD--------AAPYVLLSNIHA 286
+ C + +A R+ E+ V P + A+ +LL IHA
Sbjct: 376 IGGCIQNADIPLAAALFSRMRED--NVKPNEFTYSTVLTASIPILLPQIHA 424
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 127/256 (49%), Gaps = 8/256 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMP-IRNVIAWITLIAGKAQNGLAEDVLDQ 59
GF D +++ Y K G L + + LMP +NV++W +I G QN
Sbjct: 332 GFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAAL 391
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
++ MR +P++ T+ +V+++ + QIHA+++K V ++L++ YS+
Sbjct: 392 FSRMREDNVKPNEFTYSTVLTASIPILL----PQIHAQIIKTNYQHAPSVGTALLASYSK 447
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G ++++ F ++ DVV WS+M++ Y G + A N+F +M + + N+ T S
Sbjct: 448 LGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSA 507
Query: 180 LYAC-SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+ AC S ++G +F + + KYR + + + +V + R G +D +A ++
Sbjct: 508 IDACASPTAGIDQGRQFHAISI-KYRYQDAICVGSALVTMYARKGSID-SARIVFERQTD 565
Query: 239 ANAIIWKTLLSACKTH 254
+ + W +++S H
Sbjct: 566 RDLVSWNSMISGYAQH 581
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 78/148 (52%), Gaps = 2/148 (1%)
Query: 6 LVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRM 65
+ GS+L MY + GS+ V R++++W ++I+G AQ+G +++ LD + M
Sbjct: 537 ICVGSALVTMYARKGSIDSARIVFERQTDRDLVSWNSMISGYAQHGYSKEALDTFRQMET 596
Query: 66 VGFRPDKITFVSVISSCSELATLGQGQQ-IHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
VG D TF++VI C+ + +GQQ + V+ S + S ++ +YSR G LD
Sbjct: 597 VGIEMDGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTMEHYSCMVDLYSRAGKLD 656
Query: 125 DSVKTFLECEY-SDVVLWSSMIAAYGFH 151
+++ + + ++W +++ A H
Sbjct: 657 ETMNLIEGMPFPAGAMVWRTLLGACRVH 684
>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 701
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 173/445 (38%), Positives = 262/445 (58%), Gaps = 15/445 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ D+ GSSL MY K L + ++P ++ I+W ++IAG QNG + L +
Sbjct: 257 GFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFF 316
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M +P ++F SVI +C+ L L G+Q+H +V+ G + + SSL+ MY++C
Sbjct: 317 RRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKC 376
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + F + D+V W+++I HG +A++LFE M + V F+++L
Sbjct: 377 GNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVL 436
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM-PVKA 239
ACSH GL ++G +F+ M + + P LEHY V DLLGR G L+EA I NM V+
Sbjct: 437 TACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEEAYDFISNMRGVQP 496
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
+W LL+AC+ HKS ++A ++ +++L V+ ++ YVL+SNI+++A+RW+ + R
Sbjct: 497 TGSVWSILLAACRAHKSVELAEKVLDKLLSVDSENMGAYVLMSNIYSAAQRWKDAARLRI 556
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
MR++ +KK P SW+E+ NQVH F GDKSHP +I+ L+ L +M+ GYV DT
Sbjct: 557 HMRKKGLKKTPACSWIEVGNQVHTFMAGDKSHPYYDKINKALDVLLEQMEKEGYVIDTNQ 616
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKN 405
+HD+D E K L +HSE+LAIA+ T G + + K+I++I
Sbjct: 617 VLHDVDEELKRELLHNHSERLAIAYGIISTTAGTTIRVIKNIRVCADCHTAIKFITKIVG 676
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
REI VRD SRFHHF+NG CSCGDYW
Sbjct: 677 REITVRDNSRFHHFKNGSCSCGDYW 701
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 141/290 (48%), Gaps = 7/290 (2%)
Query: 26 EKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVG-FRPDKITFVSVISSCSE 84
+KV +MP+R+V++W T+IAG AQNG+ + LD M G +PD T S++ +E
Sbjct: 180 KKVFDMMPVRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAE 239
Query: 85 LATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSM 144
+ +G++IH V+ G DV + SSLI MY++C L+ S++ F D + W+S+
Sbjct: 240 HVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSI 299
Query: 145 IAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYR 204
IA +G+ + + F +M ++ + V+F S++ AC+H G + +V+
Sbjct: 300 IAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGF 359
Query: 205 RKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIA 264
+ +VD+ +CG + A + + K + + W ++ C H A +
Sbjct: 360 DDNEFI-ASSLVDMYAKCGNIKMARYVFDRID-KRDMVAWTAIIMGCAMHGHALDAVSLF 417
Query: 265 EEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGV 312
E +L GV P A +L+ + +G F ER+ PG+
Sbjct: 418 ENMLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSM--ERDFGIAPGL 465
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 164/440 (37%), Positives = 264/440 (60%), Gaps = 24/440 (5%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+SL MY K G + ++ M R+V+AW +I+G +Q + LD ++ M+
Sbjct: 264 TSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANID 323
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P++IT VS++SSC+ L L G+ +H + K L V + ++L+ Y++CG ++ S++
Sbjct: 324 PNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEV 383
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F + +V+ W+ +I +G+G++A+ F M +K E NDVTF+ +L ACSH GL
Sbjct: 384 FGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLV 443
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
++G + F M + + +PR+EHY C+VD+LGR G ++EA I+NMP++ NA+IW+TLL+
Sbjct: 444 DEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLA 503
Query: 250 ACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKE 309
+CK HK+ ++ ++++ + P + Y+LLSNI+AS RW+ + R M+E+ +KK
Sbjct: 504 SCKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKVRGEMKEKGIKKT 563
Query: 310 PGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEK 369
PG S +E+ +H+F D H +S EI +E++ ++K GYVP+T D + ++K
Sbjct: 564 PGCSLIELDGVIHEFFAEDNVHSQSEEIYNAIEDMMKQIKSAGYVPNTAEARLDAEEDDK 623
Query: 370 EYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREIIV 410
E ++ HHSEKLAIAF GLI P K +S++ NREI+V
Sbjct: 624 ESSVSHHSEKLAIAF-----GLIKSPPGTTIRITKNLRVCTDCHNATKLVSKVFNREIVV 678
Query: 411 RDASRFHHFRNGKCSCGDYW 430
RD +RFHHF+ G CSC DYW
Sbjct: 679 RDRTRFHHFKEGSCSCNDYW 698
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 138/250 (55%), Gaps = 2/250 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF ++L HMY G + +V M RNV W ++ AG ++G E+V+ +
Sbjct: 154 GFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLF 213
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M + R D++T VSV+++C LA L G+ I+ V + G + +I+SL+ MY++C
Sbjct: 214 HEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKC 273
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +D + + F + + DVV WS+MI+ Y + EA++LF +M++ + N++T VS+L
Sbjct: 274 GQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSIL 333
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
+C+ G E G ++ +KK R K + T ++D +CG ++ + + MPVK N
Sbjct: 334 SSCAVLGALETG-KWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVK-N 391
Query: 241 AIIWKTLLSA 250
+ W L+
Sbjct: 392 VLSWTVLIQG 401
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 96/182 (52%), Gaps = 2/182 (1%)
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
+PD+ TF ++ CS L L +G+QIHA ++K G V ++LI MY+ CG ++ + +
Sbjct: 121 QPDEFTFPCILKVCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARR 180
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F E +V W+SM A Y G EE + LF +M + + ++VT VS+L AC
Sbjct: 181 VFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLAD 240
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
E G E+ + V++ K T +VD+ +CG +D A L M + + + W ++
Sbjct: 241 LELG-EWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMD-RRDVVAWSAMI 298
Query: 249 SA 250
S
Sbjct: 299 SG 300
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 90/185 (48%), Gaps = 7/185 (3%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
+L + G++L Y K GS+ +V MP++NV++W LI G A NG + L+ + L
Sbjct: 358 KLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYL 417
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSRCG 121
M P+ +TF+ V+S+CS + +G+ + + + G + ++ + R G
Sbjct: 418 MLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAG 477
Query: 122 CLDDSVKTFLECEYS-DVVLWSSMIAAYGFHGK---GEEAINLFEQMEQKEFEANDVTFV 177
++++ + + V+W +++A+ H GEE++ +E + D +
Sbjct: 478 LIEEAFQFIKNMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQLIILEPT--HSGDYILL 535
Query: 178 SLLYA 182
S +YA
Sbjct: 536 SNIYA 540
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 53/117 (45%), Gaps = 2/117 (1%)
Query: 87 TLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC--GCLDDSVKTFLECEYSDVVLWSSM 144
T+ +IHA ++K L V +L+ + +D +V F + + D ++ M
Sbjct: 36 TIRDLNEIHAHLIKTRLLLKPKVAENLLESAAILLPTSMDYAVSIFRQIDEPDSPAYNIM 95
Query: 145 IAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVK 201
I + EAI LF++M + + ++ TF +L CS +G + L++K
Sbjct: 96 IRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQIHALIMK 152
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 173/451 (38%), Positives = 259/451 (57%), Gaps = 28/451 (6%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + LV G L MY+K G L E + + +NV++W +I G ++ L +
Sbjct: 293 GSNIRLVNG--LIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLF 350
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASL--DVGVISSLISMYS 118
M P+ +TF+S++ +C+ L L G+ +HA V K S+ V + +SLI MY+
Sbjct: 351 RRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYA 410
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+CG L + + F + W++MI+ + HG + A+ LF +M + F +D+TFV
Sbjct: 411 KCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVG 470
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+L AC H GL G +F M++ Y+ P+L HY C++DL GR G DEA L++NM +K
Sbjct: 471 VLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMK 530
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
+ IW +LL AC+ H+ ++A +A+ + + P++ + YVLLSNI+A A RW+ V++ R
Sbjct: 531 PDGAIWCSLLGACRIHRRIELAESVAKHLFELEPENPSAYVLLSNIYAGAGRWEDVAKIR 590
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
+ + +KK PG S +E+ + VH+F +GDK HP+S EI L+E+ ++ G+VPDT
Sbjct: 591 TRLNDNRMKKVPGCSSIEVDSVVHEFLVGDKVHPQSNEIYKMLDEIDMRLEKAGFVPDTS 650
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKY 399
++DMD E KE L HHSEKLAIAF GLI P K
Sbjct: 651 EVLYDMDEEWKEGVLSHHSEKLAIAF-----GLISTKPGTTIRIMKNLRVCGNCHSATKL 705
Query: 400 ISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
IS+I NREII RD +RFHHF++G CSC DYW
Sbjct: 706 ISKIFNREIIARDRNRFHHFKDGSCSCKDYW 736
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 144/278 (51%), Gaps = 13/278 (4%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D V+ ++L Y G L E ++ +P+R+V++W +I+G AQ+G E+ + + MR
Sbjct: 193 DAVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMR 252
Query: 65 MVGFRPDKITFVSVISSCSEL-ATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
P+ T +SV+S+C++ ++L G + + + G ++ +++ LI MY +CG L
Sbjct: 253 RAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDL 312
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
+++ F + + +VV W+ MI Y +EA+ LF +M Q + NDVTF+S+L AC
Sbjct: 313 EEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPAC 372
Query: 184 SHCGLKEKGM---EFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
++ G + G + D +K + L +T ++D+ +CG L A + M K+
Sbjct: 373 ANLGALDLGKWVHAYVDKNMKSMKNTVAL--WTSLIDMYAKCGDLAVAKRIFDCMNTKSL 430
Query: 241 AIIWKTLLSACKTHKSTDMA----GRIAEEILGVNPQD 274
A W ++S H TD A R+ E G P D
Sbjct: 431 A-TWNAMISGFAMHGHTDTALGLFSRMTSE--GFVPDD 465
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 115/252 (45%), Gaps = 33/252 (13%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
N + W +I G + + L+ Y M G P++ TF S+ SC+++ +G+Q+H
Sbjct: 92 NHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVH 151
Query: 96 AEVVKAGASLDVGVISSLISMYSRC-------------------------------GCLD 124
A V+K G + V +SLI+MY++ G LD
Sbjct: 152 AHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLD 211
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
++ + F E DVV W++MI+ Y G+ EEA+ FE+M + + N T +S+L AC+
Sbjct: 212 EARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACA 271
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
G + + ++ + ++D+ +CG L+EA+ L + K N + W
Sbjct: 272 QSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDK-NVVSW 330
Query: 245 KTLLSACKTHKS 256
++ TH S
Sbjct: 331 NVMIGG-YTHMS 341
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 105/244 (43%), Gaps = 20/244 (8%)
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISM--YSRCGCLDDSVKTFLEC 133
++++S+C L TL +QIH++++K G +S LI S G L ++ F
Sbjct: 32 LTLLSNCKTLQTL---KQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTI 88
Query: 134 EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGM 193
+ V+W+ MI A+ + M E N+ TF S+ +C+ +G
Sbjct: 89 RNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGK 148
Query: 194 EFFDLMVKKYRRKPRLEH----YTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
+ V + K LEH +T ++++ + G L A L+ + +A+ + L++
Sbjct: 149 Q-----VHAHVLKLGLEHNAFVHTSLINMYAQNGELVN-ARLVFDKSSMRDAVSFTALIT 202
Query: 250 ACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKE 309
+ D A + +EI +D + + + +A + R + F E MR V
Sbjct: 203 GYASKGFLDEARELFDEI---PVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVT-- 257
Query: 310 PGVS 313
P VS
Sbjct: 258 PNVS 261
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 170/444 (38%), Positives = 260/444 (58%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G LD++ G++L MY K G + + + M ++ +++ +++G QNG A L +
Sbjct: 342 GXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIF 401
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+M++ G PD T + V+ +CS LA L G H ++ G + D + ++LI MYS+C
Sbjct: 402 RMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKC 461
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + + F + D+V W++MI YG HG G EA+ LF + + +D+TF+ LL
Sbjct: 462 GKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLL 521
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
+CSH GL +G +FD M + + PR+EH C+VD+LGR G +DEA IRNMP + +
Sbjct: 522 SSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPD 581
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
IW LLSAC+ HK+ ++ ++++I + P+ +VLLSNI+++A RW + R
Sbjct: 582 VRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRIT 641
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
++ +KK PG SW+EI VH F GD+SH + +I+ LEEL EMK GY +
Sbjct: 642 QKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECSFV 701
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA----EHTRGLIVM----------LPFKYISEIKNR 406
D++ EEKE L +HSEKLAIAF + R ++V K+++ I R
Sbjct: 702 FQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCGDCHAAIKFMTVITKR 761
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EI VRDA+RFHHF+NG C+CGD+W
Sbjct: 762 EITVRDANRFHHFKNGTCNCGDFW 785
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 152/309 (49%), Gaps = 7/309 (2%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F+ +V G+ L MY K L+ K+ +M +RN ++W +I G + ++ L+ ++
Sbjct: 241 FDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFD 300
Query: 62 LMRMV-GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M + P +T SV+ +C++L L +G+++H ++K G LD+ + ++L+SMY++C
Sbjct: 301 QMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKC 360
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +DD+++ F D V +S++++ +G A+++F M+ + + T + +L
Sbjct: 361 GVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVL 420
Query: 181 YACSHCGLKEKGM-EFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
ACSH + G L+V+ + + ++D+ +CG + A + M +
Sbjct: 421 PACSHLAALQHGFCSHGYLIVRGFATDTLI--CNALIDMYSKCGKISFAREVFNRMD-RH 477
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLSNIHASAKRWQGVSEF 297
+ + W ++ H A + ++ LG+ P D LLS+ S +G F
Sbjct: 478 DIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWF 537
Query: 298 REAMRERNV 306
R+ ++
Sbjct: 538 DAMSRDFSI 546
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 137/277 (49%), Gaps = 9/277 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E D+ ++L Y K G LVE +++ M R+V+AW +IAG + GL +D +
Sbjct: 139 GLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLI 198
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVI--SSLISMYS 118
M+ G P+ T V V+ + E LG G+ +H V+ S D GV+ + L+ MY+
Sbjct: 199 MQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRR--SFDNGVVVGTGLLDMYA 256
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE-FEANDVTFV 177
+C CL + K F + V WS+MI Y +EA+ LF+QM K+ + VT
Sbjct: 257 KCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLG 316
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
S+L AC+ +G + ++K L T ++ + +CG +D+A M
Sbjct: 317 SVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNT-LLSMYAKCGVIDDAIRFFDXMNP 375
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRIAE--EILGVNP 272
K +++ + ++S C + + +A I ++ G++P
Sbjct: 376 K-DSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDP 411
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 128/278 (46%), Gaps = 2/278 (0%)
Query: 12 LAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPD 71
L +Y+ +V ++ +P +VI W +I A NG + +D Y+ M +G RP+
Sbjct: 49 LTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPN 108
Query: 72 KITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFL 131
K T+ V+ +CS L + G +IH+ G DV V ++L+ Y++CG L ++ + F
Sbjct: 109 KYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFS 168
Query: 132 ECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEK 191
+ DVV W++MIA +G ++A+ L QM+++ N T V +L
Sbjct: 169 SMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGH 228
Query: 192 GMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSAC 251
G V++ + T ++D+ +C L A + M V+ N + W ++
Sbjct: 229 GKALHGYCVRRSFDNGVVVG-TGLLDMYAKCQCLLYARKIFDVMGVR-NEVSWSAMIGGY 286
Query: 252 KTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAK 289
A + ++++ + D P L S + A AK
Sbjct: 287 VXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAK 324
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 101/215 (46%), Gaps = 4/215 (1%)
Query: 72 KITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFL 131
K ++ ++ +C + +L + ++IH +K ++ D V+ L +Y C + + + F
Sbjct: 8 KNNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFD 67
Query: 132 ECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEK 191
E V+LW+ +I AY ++G + AI+L+ M N T+ +L ACS E
Sbjct: 68 EIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIED 127
Query: 192 GMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSAC 251
G+E K + + + T +VD +CG L EA L +M + + + W +++ C
Sbjct: 128 GVEIHS-HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHR-DVVAWNAMIAGC 185
Query: 252 KTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNI 284
+ D A ++ ++ G+ P + +L +
Sbjct: 186 SLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTV 220
>gi|297798134|ref|XP_002866951.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312787|gb|EFH43210.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 630
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 168/449 (37%), Positives = 272/449 (60%), Gaps = 26/449 (5%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E LV+ +++ Y K G++ + M R++++W +I G +Q+G D L +
Sbjct: 187 ERSLVSSTAMITCYAKQGNVEAARALFDRMCERDIVSWNVMIDGYSQHGFPSDALMLFQK 246
Query: 63 MRMVG-FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
+ G +PD+IT V+ +S+CS++ L G+ IH V + L+V V ++LI MYS+CG
Sbjct: 247 LLADGKPKPDEITVVAALSACSQIGALETGRWIHVFVNSSRIRLNVKVCTALIDMYSKCG 306
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQ-KEFEANDVTFVSLL 180
L+++V F + D+V W++MI Y HG ++A+ LF++M+ + D+TF+ L
Sbjct: 307 SLEEAVLVFNDTPRKDIVAWNAMITGYAMHGYSQDALRLFDEMQGITGLQPTDITFIGTL 366
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+H GL +G++ F+ M ++Y KP++EHY C+V LLGR G L A +I+NM ++A+
Sbjct: 367 QACAHAGLVNEGIQIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYEIIKNMNMEAD 426
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+++W ++L +CK H + IAE ++G N ++ YVLLSNI+A ++GV++ R
Sbjct: 427 SVLWSSVLGSCKLHGEFMLGKEIAEYLIGQNISNSGIYVLLSNIYALVGDYEGVAKVRNL 486
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+E+ + KEPG+S +EI N+VH+F GD+ H +S EI L +++ +K GYVP+T
Sbjct: 487 MKEKGIVKEPGISTIEIDNKVHEFRAGDREHLKSKEIYTMLRKMSERIKSHGYVPNTNTV 546
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
+HD++ EKE +L+ HSE+LAIA+ GLI P K IS
Sbjct: 547 LHDLEETEKERSLQVHSERLAIAY-----GLISTKPGSPLKIFKNLRVCSDCHTVTKLIS 601
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+I R+I++RD +RFHHF +G CSC D+W
Sbjct: 602 KITGRKIVMRDRNRFHHFSDGSCSCDDFW 630
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 128/296 (43%), Gaps = 43/296 (14%)
Query: 50 NGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV 109
NGL + Y + P++ TF S++ SCS + G+ IH V+K G LD V
Sbjct: 106 NGLKDQAFLLYVQLLSSQINPNEFTFSSILKSCSTKS----GKLIHTHVLKFGLGLDPYV 161
Query: 110 ISSLISMYSRCGCLDDSVKTFLE--------------------------------CEYSD 137
+ L+ +Y++ G + + K F CE D
Sbjct: 162 ATGLVDIYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDRMCE-RD 220
Query: 138 VVLWSSMIAAYGFHGKGEEAINLFEQ-MEQKEFEANDVTFVSLLYACSHCGLKEKGMEFF 196
+V W+ MI Y HG +A+ LF++ + + + +++T V+ L ACS G E G +
Sbjct: 221 IVSWNVMIDGYSQHGFPSDALMLFQKLLADGKPKPDEITVVAALSACSQIGALETG-RWI 279
Query: 197 DLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKS 256
+ V R + ++ T ++D+ +CG L+EA + + P K + + W +++ H
Sbjct: 280 HVFVNSSRIRLNVKVCTALIDMYSKCGSLEEAVLVFNDTPRK-DIVAWNAMITGYAMHGY 338
Query: 257 TDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRW---QGVSEFREAMRERNVKKE 309
+ A R+ +E+ G+ + + A A +G+ F +E +K +
Sbjct: 339 SQDALRLFDEMQGITGLQPTDITFIGTLQACAHAGLVNEGIQIFESMGQEYGIKPK 394
>gi|297805648|ref|XP_002870708.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
gi|297316544|gb|EFH46967.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
Length = 1111
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 165/441 (37%), Positives = 266/441 (60%), Gaps = 25/441 (5%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L ++Y K+G L+ K+ + ++N+++W T+I QNGLAE+ L +N+ R VG +
Sbjct: 676 NALMNLYGKTGDLISSCKLFEDLSVKNLVSWNTMIVIHLQNGLAEEGLAYFNMSRWVGLK 735
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
PD+ TF++V+ C ++ + Q IH ++ G + + + ++L+ +Y++ G L+DS
Sbjct: 736 PDQATFLAVLRVCEDIGVVRLSQGIHGLIMFCGFNANTCITTALLDLYAKLGRLEDSSTV 795
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
FLE D + W++M+AAY HG G +AI FE M + VTF LL ACSH GL
Sbjct: 796 FLEITSPDSMAWTAMLAAYATHGYGRDAIKHFELMVHYGLSPDHVTFTHLLNACSHSGLV 855
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
E+G +F+ M K+YR +PRL+HY+C+VDL+GR G L +A LI+ MP++ ++ +W LL
Sbjct: 856 EEGRYYFETMSKRYRIEPRLDHYSCMVDLMGRSGLLQDAYGLIKEMPMEPSSGVWGALLG 915
Query: 250 ACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKE 309
AC+ +K T + + A+ + + P+D Y++LSNI++++ W+ S R M+++ + +
Sbjct: 916 ACRVYKDTQLGTKAAKRLFELEPRDGRNYIMLSNIYSASGLWKDASRIRNLMKQKGLVRA 975
Query: 310 PGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLR-GYVPDTGADMHDMDSEE 368
G S++E N++H+F +GD SHP S +I L+E+ +MK G+ T +HD+D +
Sbjct: 976 SGYSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSELGFKSRTEFVLHDVDEDV 1035
Query: 369 KEYNLKHHSEKLAIAFAEHTRGLIVMLPF-------------------KYISEIKNREII 409
KE + HSEK+A+AF GL+V+ P K IS I+ R II
Sbjct: 1036 KEEMINQHSEKIAMAF-----GLLVISPMEPIIIRKNLRICGDCHETAKAISLIEKRRII 1090
Query: 410 VRDASRFHHFRNGKCSCGDYW 430
+RD+ RFHHF G CSC DYW
Sbjct: 1091 IRDSKRFHHFLEGSCSCRDYW 1111
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 156/439 (35%), Positives = 262/439 (59%), Gaps = 18/439 (4%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D V +++ + G + K+ MP ++ IAW +I+G AQ G + + L+ ++LM+
Sbjct: 181 DFVCRTAMVTACARCGDVAFARKLFEGMPEKDPIAWNAMISGYAQVGESREALNLFHLMQ 240
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+ G + + ++ +SV+S+C++L L QG+ H+ + + + V + ++L+ +Y++CG +D
Sbjct: 241 LEGVKVNGVSMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLGTTLVDLYAKCGDMD 300
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+++ F E +V WSS + +G GE+ + LF M+Q N VTFVS+L CS
Sbjct: 301 KAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLKLFSLMKQDGVTPNAVTFVSVLRGCS 360
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
G ++G + FD M ++ +P+L+HY C+VDL R G L++A ++I+ MP+KA+A +W
Sbjct: 361 VVGFVDEGQKHFDSMRNEFGIEPQLDHYGCLVDLYARAGRLEDAVSIIQQMPMKAHAAVW 420
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
+LL A + +K+ ++ ++++L + + YVLLSNI+A + W VS R++M+ +
Sbjct: 421 SSLLHASRMYKNLELGVLASKKMLELETSNHGAYVLLSNIYADSDDWDNVSHVRQSMKSK 480
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
V+K+PG S +E+ +VH+F +GDKSHP+ EID ++++ ++L GY DT M D+
Sbjct: 481 GVRKQPGCSVMEVNGEVHEFFVGDKSHPKYNEIDAVWKDISRRLRLAGYKADTTPVMFDI 540
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPFK----------------YISEIKNREI 408
D EEKE L HSEK AIAF L +P + IS+I NREI
Sbjct: 541 DEEEKEDALCLHSEKAAIAFG--IMSLKADVPIRIVKNLRVCGDCHQVSMMISKIFNREI 598
Query: 409 IVRDASRFHHFRNGKCSCG 427
IVRD +RFHHF++G+ G
Sbjct: 599 IVRDRNRFHHFKDGRGYLG 617
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 109/248 (43%), Gaps = 35/248 (14%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYN--LMRMVGFRPDKITFVSVISSCSELATLGQGQQ 93
+ A ++I ++ + E D Y+ L G +PD T ++ +C+ L G Q
Sbjct: 78 TLFALNSMIRAHCKSPVPEKSFDFYSRILSSGNGLKPDNYTVNFLVQACTGLGMRETGLQ 137
Query: 94 IHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVL------------- 140
+H ++ G D V + LIS+Y+ GCLD K F Y D V
Sbjct: 138 VHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSVSYPDFVCRTAMVTACARCGD 197
Query: 141 ------------------WSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
W++MI+ Y G+ EA+NLF M+ + + N V+ +S+L A
Sbjct: 198 VAFARKLFEGMPEKDPIAWNAMISGYAQVGESREALNLFHLMQLEGVKVNGVSMISVLSA 257
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
C+ G ++G + +++ + K + T +VDL +CG +D+A + M K N
Sbjct: 258 CTQLGALDQG-RWAHSYIERNKIKITVRLGTTLVDLYAKCGDMDKAMEVFWGMEEK-NVY 315
Query: 243 IWKTLLSA 250
W + L+
Sbjct: 316 TWSSALNG 323
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 98/190 (51%), Gaps = 4/190 (2%)
Query: 66 VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD 125
VGFRP+++TF+S+IS+C +G IH V+K+G +V V+++L+++Y + G L
Sbjct: 631 VGFRPNEVTFLSMISACVHGGNKEEGVCIHGLVMKSGVLEEVKVVNALMNLYGKTGDLIS 690
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
S K F + ++V W++MI + +G EE + F + + TF+++L C
Sbjct: 691 SCKLFEDLSVKNLVSWNTMIVIHLQNGLAEEGLAYFNMSRWVGLKPDQATFLAVLRVCED 750
Query: 186 CGLKEKGMEFFDL-MVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
G+ L M + + T ++DL + G L++++ + + +++ W
Sbjct: 751 IGVVRLSQGIHGLIMFCGFNANTCIT--TALLDLYAKLGRLEDSSTVFLEI-TSPDSMAW 807
Query: 245 KTLLSACKTH 254
+L+A TH
Sbjct: 808 TAMLAAYATH 817
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 93/210 (44%), Gaps = 15/210 (7%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF + ++L +Y K G L + V + + +AW ++A A +G D + +
Sbjct: 768 GFNANTCITTALLDLYAKLGRLEDSSTVFLEITSPDSMAWTAMLAAYATHGYGRDAIKHF 827
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQ---QIHAEVVKAGASLDVGVISSLISMY 117
LM G PD +TF ++++CS + +G+ + ++ + LD S ++ +
Sbjct: 828 ELMVHYGLSPDHVTFTHLLNACSHSGLVEEGRYYFETMSKRYRIEPRLD--HYSCMVDLM 885
Query: 118 SRCGCLDDSVKTFLE--CEYSDVVLWSSMIAA---YGFHGKGEEAINLFEQMEQKEFEAN 172
R G L D+ E E S V W +++ A Y G +A ++E + +
Sbjct: 886 GRSGLLQDAYGLIKEMPMEPSSGV-WGALLGACRVYKDTQLGTKAAKRLFELEPR--DGR 942
Query: 173 DVTFVSLLYACSHCGLKEKGMEFFDLMVKK 202
+ +S +Y+ S GL + +LM +K
Sbjct: 943 NYIMLSNIYSAS--GLWKDASRIRNLMKQK 970
>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 679
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 173/446 (38%), Positives = 267/446 (59%), Gaps = 25/446 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
+LV+ +++ + YMKSG ++ MPI +++ W +IAG NG D + + +M
Sbjct: 239 NLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMML 298
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+G RP T VSV+S+ S LA LG+G+ IH+ + K G LD + +SLI MY++CGC++
Sbjct: 299 KLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIE 358
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
++ F + V W+++I G HG A+ LF +M + + N + F+ +L AC+
Sbjct: 359 SALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACN 418
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL + G ++FD+M+ +Y+ +P LEHY C+VD+L R G+L+EA I NMP+ N +IW
Sbjct: 419 HAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIW 478
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
+LL + H D+ A+ ++ V P+ Y+LLSN++A++ W+ VS RE M +R
Sbjct: 479 MSLLGGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKR 538
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
+K+PG S +E K +H+F +GD SHP++ EI + E+ ++K G+VPDT + +
Sbjct: 539 GFRKDPGCSSVEHKGTLHEFIVGDISHPQTKEIYAKMSEMKEKLKCVGHVPDTTQVLLCI 598
Query: 365 DSE-EKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIK 404
+ E EKE L++HSE+LAIAF GLI + P K +S+I
Sbjct: 599 EGEKEKEAELENHSERLAIAF-----GLINVKPGIPIRIMKNLRVCNDCHSVTKLLSKIY 653
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
+REIIVRD RFHHF+NG CSC DYW
Sbjct: 654 SREIIVRDNCRFHHFKNGSCSCMDYW 679
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 109/216 (50%), Gaps = 11/216 (5%)
Query: 35 RNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQI 94
R++I W T+I +N + D + ++ + + + PD T VI C+ L + +G+QI
Sbjct: 76 RSLIHWNTIIKCYVENQFSHDGIVLFHEL-VHEYLPDNFTLPCVIKGCARLGVVQEGKQI 134
Query: 95 HAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKG 154
H +K G DV V SL++MYS+CG +D + K F DVVLW+S+I Y G+
Sbjct: 135 HGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEI 194
Query: 155 EEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC 214
+ A+ LFE+M +++ ++ L+ S CG E + FD M + L +
Sbjct: 195 DIALQLFEEMPERD----AFSWTVLVDGLSKCGKVESARKLFDQMPCR-----NLVSWNA 245
Query: 215 VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+++ + G D A L MP+ + + W +++
Sbjct: 246 MINGYMKSGDFDSALELFYQMPI-WDLVTWNLMIAG 280
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 123/290 (42%), Gaps = 51/290 (17%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D+ SL +MY K G + KV M ++V+ W +LI G A+ G + L +
Sbjct: 142 GFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLF 201
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M D ++ ++ S+ + +++ ++ ++ +++I+ Y +
Sbjct: 202 EEMP----ERDAFSWTVLVDGLSKCGKVESARKLFDQM----PCRNLVSWNAMINGYMKS 253
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLF------------------- 161
G D +++ F + D+V W+ MIA Y +G+ +A+ +F
Sbjct: 254 GDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVL 313
Query: 162 ----------------EQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRR 205
ME+ FE + + SL+ + CG E + F + KK
Sbjct: 314 SAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKK--- 370
Query: 206 KPRLEHYTCVVDLLGRCGYLDEAAALIRNM---PVKANAIIWKTLLSACK 252
++ H+T ++ LG G + A AL M +K NAII+ +L+AC
Sbjct: 371 --KVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACN 418
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 102/217 (47%), Gaps = 18/217 (8%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFELD + G+SL MY K G + V R + + V W +I G +G+A L +
Sbjct: 336 GFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALF 395
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVV---KAGASLDVGVISSLISMY 117
M G +P+ I F+ V+++C+ + G+Q ++ K +L+ L+ +
Sbjct: 396 LEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLE--HYGCLVDIL 453
Query: 118 SRCGCLDDSVKTFLECEYS-DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVT- 175
R G L+++ T S + V+W S++ HGK I++ E Q+ E T
Sbjct: 454 CRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGK----IDIGEYAAQRVIEVAPETI 509
Query: 176 ----FVSLLYACSHCGLKEKGMEFFDLMVKK-YRRKP 207
+S +YA S G+ EK ++M K+ +R+ P
Sbjct: 510 GCYILLSNMYAAS--GMWEKVSHVREMMYKRGFRKDP 544
>gi|296089078|emb|CBI38781.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 169/454 (37%), Positives = 265/454 (58%), Gaps = 29/454 (6%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF DL ++L Y GS V +R+V+ W +I GL+E D
Sbjct: 141 GFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLL 200
Query: 61 NLM-RMVGFRPDKITFVSVISSCSELATLGQGQQIHA---EVVKAGASLDVGVISSLISM 116
+ M ++ RPD++T VS++ +C++L L +G+ +H+ E+ K + D+ + ++L+ M
Sbjct: 201 DEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELDKFEINCDLVLETALVDM 260
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
Y++CG +D +++ F +V W+++I HG GE+AI+LF+QME + +DVTF
Sbjct: 261 YAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTF 320
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
++LL ACSH GL ++G+ F M K++ +PR+EHY CVVDLL R +D+A A I NMP
Sbjct: 321 IALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMP 380
Query: 237 VKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSE 296
+KAN+++W TLL AC++ D+A +I ++ + P YV+LSN++A +W +
Sbjct: 381 IKANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALK 440
Query: 297 FREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLR-GYVP 355
R+ M+ + ++K PG SW+E+ +HQF GD+SH ++ +I +EE+T + L G+VP
Sbjct: 441 LRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLDGGHVP 500
Query: 356 DTGADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP------------------- 396
T + D++ EEKE++L HSEKLAIA GLI
Sbjct: 501 GTANVLFDIEEEEKEHSLFLHSEKLAIAL-----GLISTPSGSPIRIVKNLRVCNDCHSF 555
Query: 397 FKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
K S++ NREI+ RD SRFHHF+ G CSC D+W
Sbjct: 556 LKVTSKVYNREIVARDRSRFHHFKEGSCSCMDFW 589
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 144/308 (46%), Gaps = 11/308 (3%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F L++ +L+H SG L K+ M + T+I G A++ + + Y
Sbjct: 45 FSSKLISFLALSH----SGDLNYARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYY 100
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M G D T+ V+++C+ L + G++ H EV+K G D+ VI++LI Y CG
Sbjct: 101 FMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCG 160
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQ-KEFEANDVTFVSLL 180
+ F E DVV W+ MI A+ G E+A +L ++M + ++VT VSL+
Sbjct: 161 SFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLV 220
Query: 181 YACSHCGLKEKG--MEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
AC+ G E+G + + + K+ L T +VD+ +CG +D A + R M V+
Sbjct: 221 PACAQLGNLERGKFLHSYSKELDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVR 280
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSE 296
N W L+ H + A + +++ + P D LL + +G++
Sbjct: 281 -NVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAM 339
Query: 297 FREAMRER 304
F +AM+ +
Sbjct: 340 F-QAMKNK 346
>gi|359473281|ref|XP_003631282.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Vitis vinifera]
Length = 615
Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 176/447 (39%), Positives = 266/447 (59%), Gaps = 24/447 (5%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E DLV +++ K G + K+ M ++ IAW +I+G Q G + + L +NL
Sbjct: 174 EPDLVCQTAMVSACAKMGDVGFARKLFDKMSHKDPIAWNAMISGYVQCGQSREALSLFNL 233
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M+ G + ++++ VSV+S+CS L L QG+ HA + + + + + ++LI MY++CG
Sbjct: 234 MQREGVKVNEVSMVSVLSACSHLGALDQGRWAHAYIERNKLRMTLTLGTALIDMYAKCGN 293
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
++ +++ F + +V WSS I +G GE+ + LF M+Q + N++TFVS+L
Sbjct: 294 MNKAMEVFWGMKEKNVYTWSSAIGGLAMNGAGEKCLELFSLMKQDSVQPNEITFVSVLRG 353
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
CS GL E+G + F+ M K Y +PRLEHY C+VDL GR G+LDEA I +MPV+ +
Sbjct: 354 CSVVGLVEEGRKHFESMSKVYGIEPRLEHYGCMVDLYGRAGHLDEALNFINSMPVRPHVG 413
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMR 302
W LL+ACK +++ +M + +I+ + ++ YVLLSNI+A +K W VS R+ M
Sbjct: 414 AWGALLNACKIYRNMEMGELASRKIVELEAKNHGAYVLLSNIYADSKDWDRVSNVRQTMN 473
Query: 303 ERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMH 362
+ V+K+PG S +E+ +VH+F +GDKSHPR EI + L E++ +KL GYV +T
Sbjct: 474 VKGVRKQPGCSVIEVGGEVHEFFVGDKSHPRYAEIQVMLGEISRRLKLSGYVANTNPVFF 533
Query: 363 DMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEI 403
D++ EEKE L HSEK+AIAF GLI + P K IS+
Sbjct: 534 DIEEEEKEDALCMHSEKIAIAF-----GLISLSPDVPIRIVKNLRVCWDCHDATKMISKA 588
Query: 404 KNREIIVRDASRFHHFRNGKCSCGDYW 430
NREI+VRD +RFHHFR+G+CSC YW
Sbjct: 589 FNREIVVRDRNRFHHFRDGECSCKGYW 615
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 108/237 (45%), Gaps = 37/237 (15%)
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
PD TF ++ + ++L G G +H VK G D V S LI MY+ G LD +
Sbjct: 109 PDNYTFTFLVRTSAQLLAHGTGSSVHGAAVKYGFEYDPHVQSGLIYMYAELGGLDACHRV 168
Query: 130 F-------LECE------------------------YSDVVLWSSMIAAYGFHGKGEEAI 158
F L C+ + D + W++MI+ Y G+ EA+
Sbjct: 169 FSSICEPDLVCQTAMVSACAKMGDVGFARKLFDKMSHKDPIAWNAMISGYVQCGQSREAL 228
Query: 159 NLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDL 218
+LF M+++ + N+V+ VS+L ACSH G ++G + +++ + + L T ++D+
Sbjct: 229 SLFNLMQREGVKVNEVSMVSVLSACSHLGALDQG-RWAHAYIERNKLRMTLTLGTALIDM 287
Query: 219 LGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDA 275
+CG +++A + M K N W + + + + AG E+ + QD+
Sbjct: 288 YAKCGNMNKAMEVFWGMKEK-NVYTWSSAIGGL----AMNGAGEKCLELFSLMKQDS 339
>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 168/446 (37%), Positives = 263/446 (58%), Gaps = 24/446 (5%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
++L + L MY KSG+L +V M R+V++W ++IAG A+ GL++ + ++ M
Sbjct: 257 VELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEM 316
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
P+ IT ++ +C+ LA L +GQ+IH +++ G SLD V ++L+ MY +CG L
Sbjct: 317 EKEDLFPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGAL 376
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
+ F D+V W+ MIA YG HG G EAI F +M E ++V+F+S+LYAC
Sbjct: 377 GLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYAC 436
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
SH GL ++G FF++M +P+ EHY C+VDLL R G L +A I+ MP++ +A I
Sbjct: 437 SHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATI 496
Query: 244 WKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
W LL C+ + +A ++AE + + P++ YVLL+NI+A A++W+ V + RE +
Sbjct: 497 WGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGR 556
Query: 304 RNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHD 363
R ++K PG SW+EIK +VH F GD SHP + +I+L L++ + MK G+ P +
Sbjct: 557 RGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKMRYALIK 616
Query: 364 MDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIK 404
D EKE L HSEK+A+AF G++ + P K++S++
Sbjct: 617 ADDTEKEMALCGHSEKIAMAF-----GILSLPPGKTVRVTKNLRVCGDCHEMAKFMSKMV 671
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
R+II+RD++RFHHF++G CSC +W
Sbjct: 672 KRDIILRDSNRFHHFKDGSCSCRGHW 697
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 123/274 (44%), Gaps = 24/274 (8%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E+D V GS L MY+ G L EG ++ + V W L+ G A+ G + L +
Sbjct: 133 EVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKR 192
Query: 63 MRMVGFRP--------------DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVG 108
MR +G R D I++ S+IS +G + +++ G + D+
Sbjct: 193 MRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLA 252
Query: 109 VISS--------LISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINL 160
+ S L+ MYS+ G L+ +++ F VV W+SMIA Y G + ++ L
Sbjct: 253 TMVSVELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRL 312
Query: 161 FEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLG 220
F +ME+++ N +T +L AC+ E+G E +++ R +VD+
Sbjct: 313 FHEMEKEDLFPNSITMACILPACASLAALERGQEIHGHILRNGFSLDR-HVANALVDMYL 371
Query: 221 RCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
+CG L A L +P K + + W +++ H
Sbjct: 372 KCGALGLARLLFDMIPEK-DLVSWTVMIAGYGMH 404
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 53/91 (58%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF LD ++L MY+K G+L + ++P +++++W +IAG +G + + +
Sbjct: 355 GFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAF 414
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQG 91
N MR G PD+++F+S++ +CS L +G
Sbjct: 415 NEMRNSGIEPDEVSFISILYACSHSGLLDEG 445
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 99/215 (46%), Gaps = 22/215 (10%)
Query: 74 TFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLEC 133
T+ SV+ C++L ++ G++IH+ + +D + S L+ MY CG L + + F +
Sbjct: 103 TYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKV 162
Query: 134 EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQ-------------KEFEANDV-TFVSL 179
V LW+ ++ Y G E+++LF++M + E DV ++ S+
Sbjct: 163 ANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSM 222
Query: 180 LYACSHCGLKEKGMEFFDLMV-------KKYRRKPRLEHYTCVVDLLGRCGYLDEAAALI 232
+ GL EKG++ F+ M+ L C++D+ + G L+ A +
Sbjct: 223 ISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVELTLNNCLLDMYSKSGNLNSAIQVF 282
Query: 233 RNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEI 267
M ++ + W ++++ +DM+ R+ E+
Sbjct: 283 ETMGERS-VVSWTSMIAGYAREGLSDMSVRLFHEM 316
>gi|297805646|ref|XP_002870707.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297316543|gb|EFH46966.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 517
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 165/441 (37%), Positives = 266/441 (60%), Gaps = 25/441 (5%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L ++Y K+G L+ K+ + ++N+++W T+I QNGLAE+ L +N+ R VG +
Sbjct: 82 NALMNLYGKTGDLISSCKLFEDLSVKNLVSWNTMIVIHLQNGLAEEGLAYFNMSRWVGLK 141
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
PD+ TF++V+ C ++ + Q IH ++ G + + + ++L+ +Y++ G L+DS
Sbjct: 142 PDQATFLAVLRVCEDIGVVRLSQGIHGLIMFCGFNANTCITTALLDLYAKLGRLEDSSTV 201
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
FLE D + W++M+AAY HG G +AI FE M + VTF LL ACSH GL
Sbjct: 202 FLEITSPDSMAWTAMLAAYATHGYGRDAIKHFELMVHYGLSPDHVTFTHLLNACSHSGLV 261
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
E+G +F+ M K+YR +PRL+HY+C+VDL+GR G L +A LI+ MP++ ++ +W LL
Sbjct: 262 EEGRYYFETMSKRYRIEPRLDHYSCMVDLMGRSGLLQDAYGLIKEMPMEPSSGVWGALLG 321
Query: 250 ACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKE 309
AC+ +K T + + A+ + + P+D Y++LSNI++++ W+ S R M+++ + +
Sbjct: 322 ACRVYKDTQLGTKAAKRLFELEPRDGRNYIMLSNIYSASGLWKDASRIRNLMKQKGLVRA 381
Query: 310 PGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLR-GYVPDTGADMHDMDSEE 368
G S++E N++H+F +GD SHP S +I L+E+ +MK G+ T +HD+D +
Sbjct: 382 SGYSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSELGFKSRTEFVLHDVDEDV 441
Query: 369 KEYNLKHHSEKLAIAFAEHTRGLIVMLPF-------------------KYISEIKNREII 409
KE + HSEK+A+AF GL+V+ P K IS I+ R II
Sbjct: 442 KEEMINQHSEKIAMAF-----GLLVISPMEPIIIRKNLRICGDCHETAKAISLIEKRRII 496
Query: 410 VRDASRFHHFRNGKCSCGDYW 430
+RD+ RFHHF G CSC DYW
Sbjct: 497 IRDSKRFHHFLEGSCSCRDYW 517
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 118/226 (52%), Gaps = 6/226 (2%)
Query: 32 MPIRNVIAWITLIAGKAQNGLAEDVLDQYN-LMRM-VGFRPDKITFVSVISSCSELATLG 89
MP R+++AW +LI+G A G + + +MR VGFRP+++TF+S+IS+C
Sbjct: 1 MPERDLVAWNSLISGYAGRGYLGKCFEVLSRMMRSEVGFRPNEVTFLSMISACVHGGNKE 60
Query: 90 QGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYG 149
+G IH V+K+G +V V+++L+++Y + G L S K F + ++V W++MI +
Sbjct: 61 EGVCIHGLVMKSGVLEEVKVVNALMNLYGKTGDLISSCKLFEDLSVKNLVSWNTMIVIHL 120
Query: 150 FHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDL-MVKKYRRKPR 208
+G EE + F + + TF+++L C G+ L M +
Sbjct: 121 QNGLAEEGLAYFNMSRWVGLKPDQATFLAVLRVCEDIGVVRLSQGIHGLIMFCGFNANTC 180
Query: 209 LEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
+ T ++DL + G L++++ + + +++ W +L+A TH
Sbjct: 181 IT--TALLDLYAKLGRLEDSSTVFLEI-TSPDSMAWTAMLAAYATH 223
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 93/210 (44%), Gaps = 15/210 (7%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF + ++L +Y K G L + V + + +AW ++A A +G D + +
Sbjct: 174 GFNANTCITTALLDLYAKLGRLEDSSTVFLEITSPDSMAWTAMLAAYATHGYGRDAIKHF 233
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQ---QIHAEVVKAGASLDVGVISSLISMY 117
LM G PD +TF ++++CS + +G+ + ++ + LD S ++ +
Sbjct: 234 ELMVHYGLSPDHVTFTHLLNACSHSGLVEEGRYYFETMSKRYRIEPRLD--HYSCMVDLM 291
Query: 118 SRCGCLDDSVKTFLE--CEYSDVVLWSSMIAA---YGFHGKGEEAINLFEQMEQKEFEAN 172
R G L D+ E E S V W +++ A Y G +A ++E + +
Sbjct: 292 GRSGLLQDAYGLIKEMPMEPSSGV-WGALLGACRVYKDTQLGTKAAKRLFELEPR--DGR 348
Query: 173 DVTFVSLLYACSHCGLKEKGMEFFDLMVKK 202
+ +S +Y+ S GL + +LM +K
Sbjct: 349 NYIMLSNIYSAS--GLWKDASRIRNLMKQK 376
>gi|356568485|ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1011
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 179/460 (38%), Positives = 257/460 (55%), Gaps = 30/460 (6%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPI----------------RNVIAWITLI 44
GF+ D SSL MY K G + + ++R +P+ +++W +++
Sbjct: 552 GFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPLDVLRKGNARVSYKEPKAGIVSWGSMV 611
Query: 45 AGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGAS 104
+G NG ED L + LM D T ++IS+C+ L G+ +HA V K G
Sbjct: 612 SGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYVQKIGHR 671
Query: 105 LDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM 164
+D V SSLI MYS+ G LDD+ F + ++V+W+SMI+ Y HG+G AI LFE+M
Sbjct: 672 IDAYVGSSLIDMYSKSGSLDDAWMVFRQSNEPNIVMWTSMISGYALHGQGMHAIGLFEEM 731
Query: 165 EQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGY 224
+ N+VTF+ +L ACSH GL E+G +F +M Y P +EH T +VDL GR G+
Sbjct: 732 LNQGIIPNEVTFLGVLNACSHAGLIEEGCRYFRMMKDAYCINPGVEHCTSMVDLYGRAGH 791
Query: 225 LDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNI 284
L + I + +WK+ LS+C+ HK+ +M ++E +L V P D YVLLSN+
Sbjct: 792 LTKTKNFIFKNGISHLTSVWKSFLSSCRLHKNVEMGKWVSEMLLQVAPSDPGAYVLLSNM 851
Query: 285 HASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEEL 344
AS RW + R M +R VKK+PG SW+++K+Q+H F MGD+SHP+ EI YL+ L
Sbjct: 852 CASNHRWDEAARVRSLMHQRGVKKQPGQSWIQLKDQIHTFVMGDRSHPQDDEIYSYLDIL 911
Query: 345 TSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFA---EHTRGLIVMLP----- 396
+K GY D M D++ E+ E + HHSEKLA+ F R I ++
Sbjct: 912 IGRLKEIGYSFDVKLVMQDVEEEQGEVLISHHSEKLAVVFGIINTANRTPIRIIKNLRIC 971
Query: 397 ------FKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
KY S++ +REIIVRD RFHHF++G CSCGDYW
Sbjct: 972 TDCHNFIKYASQLLDREIIVRDIHRFHHFKHGSCSCGDYW 1011
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 155/334 (46%), Gaps = 34/334 (10%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E D+V+ + + Y+++G + + + R +P ++V++W T++ G Q G L+Q
Sbjct: 453 EGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCGYERHALEQLYC 512
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M G +TF + S L+ + G+Q+H V+K G D + SSL+ MY +CG
Sbjct: 513 MVECGTEFSAVTFSIALILASSLSHVELGRQLHGMVLKFGFDSDGFIRSSLVEMYCKCGR 572
Query: 123 LDDSVKTFLECEY----------------SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQ 166
+D + + + +V W SM++ Y ++GK E+ + F M +
Sbjct: 573 MDKASIILRDVPLDVLRKGNARVSYKEPKAGIVSWGSMVSGYVWNGKYEDGLKTFRLMVR 632
Query: 167 KEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRK--PRLEHY--TCVVDLLGRC 222
+ + T +++ AC++ G+ E G V Y +K R++ Y + ++D+ +
Sbjct: 633 ELVVVDIRTVTTIISACANAGILEFGRH-----VHAYVQKIGHRIDAYVGSSLIDMYSKS 687
Query: 223 GYLDEAAALIR--NMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPY 278
G LD+A + R N P N ++W +++S H A + EE+L G+ P +
Sbjct: 688 GSLDDAWMVFRQSNEP---NIVMWTSMISGYALHGQGMHAIGLFEEMLNQGIIPNEVTFL 744
Query: 279 VLLSNIHASAKRWQGVSEFREAMRERNVKKEPGV 312
+L+ + +G FR M + PGV
Sbjct: 745 GVLNACSHAGLIEEGCRYFR--MMKDAYCINPGV 776
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 123/264 (46%), Gaps = 34/264 (12%)
Query: 12 LAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPD 71
L +Y KS ++ +K+ +P RN W LI+G A+ G +E V + + M+ G P+
Sbjct: 330 LLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGSSEMVFNLFREMQAKGACPN 389
Query: 72 KITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFL 131
+ T SV+ CS L G+ +HA +++ G +DV + +S++ +Y +C + + + F
Sbjct: 390 QYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERLFE 449
Query: 132 ECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL------------ 179
DVV W+ MI AY G E+++++F ++ K+ + + L
Sbjct: 450 LMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCGYERHALEQ 509
Query: 180 LYACSHCGLKEKGMEF------------------FDLMVKKYRRKPRLEHYTCVVDLLGR 221
LY CG + + F MV K+ + +V++ +
Sbjct: 510 LYCMVECGTEFSAVTFSIALILASSLSHVELGRQLHGMVLKFGFDSDGFIRSSLVEMYCK 569
Query: 222 CGYLDEAAALIRNMPV----KANA 241
CG +D+A+ ++R++P+ K NA
Sbjct: 570 CGRMDKASIILRDVPLDVLRKGNA 593
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 44/91 (48%)
Query: 94 IHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGK 153
+HA VK G+ + + L+++Y++ + + K F E + W+ +I+ + G
Sbjct: 311 LHALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGS 370
Query: 154 GEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
E NLF +M+ K N T S+L CS
Sbjct: 371 SEMVFNLFREMQAKGACPNQYTLSSVLKCCS 401
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 164/436 (37%), Positives = 256/436 (58%), Gaps = 14/436 (3%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
++L MY K G L + ++ M R+V+AW +I+G Q+ + L +N M+
Sbjct: 310 ATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEV 369
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
P+ +T VSV+S+C+ L L G+ +H+ + + L V + ++L+ Y++CGC+ D+VK
Sbjct: 370 NPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVK 429
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F + W+++I +G+ EA+ LF M + E DVTF+ +L ACSH L
Sbjct: 430 AFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCL 489
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
E+G F M + Y PR+EHY C+VDLLGR G +DEA IRNMP++ NA++W+ LL
Sbjct: 490 VEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALL 549
Query: 249 SACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKK 308
SAC HK+ ++ ++I+ ++P + Y+LLSN +AS +W+ + R+ M+E+ V+K
Sbjct: 550 SACTVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQWKNAAMVRKEMKEKGVEK 609
Query: 309 EPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEE 368
PG S +E++ + +F D HP+ EI + E+ +K+ GY+P+T D+D E
Sbjct: 610 IPGCSLIELEGTIFEFFAEDSEHPQLTEIYEKVHEMIENIKMVGYIPNTADARLDVDEYE 669
Query: 369 KEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNREIIVRDAS 414
K+ ++ HHSEKLAIAF + G + L K IS++ NREIIVRD +
Sbjct: 670 KQVSVSHHSEKLAIAFGLMKSRPGATIRLSKNLRVCIDCHSATKLISKVYNREIIVRDRN 729
Query: 415 RFHHFRNGKCSCGDYW 430
RFHHF++G CSC DYW
Sbjct: 730 RFHHFKDGLCSCNDYW 745
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 136/280 (48%), Gaps = 12/280 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF +D +SL HMY G +V + + ++ VIAW +IAG +NG ++V++ +
Sbjct: 201 GFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGDWKEVVEMF 260
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M V D++T +SV ++C L GQ I + G + ++L+ MY++C
Sbjct: 261 KGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLATALVDMYAKC 320
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G LD + + F DVV WS+MI+ Y + EA+ +F +M+ E NDVT VS+L
Sbjct: 321 GELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPNDVTMVSVL 380
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY----TCVVDLLGRCGYLDEAAALIRNMP 236
AC+ G E G V Y R+ L T +VD +CG + +A +MP
Sbjct: 381 SACAVLGALETGK-----WVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMP 435
Query: 237 VKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVN--PQD 274
V+ N W L+ ++ + A + +L N P D
Sbjct: 436 VR-NTWTWTALIKGMASNGRSREALELFSSMLEANIEPTD 474
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 117/253 (46%), Gaps = 5/253 (1%)
Query: 33 PIRNVIAWITLIAGKAQNGLAEDVLDQY-NLMRMVGFRPDKITFVSVISSCSELATLGQG 91
P R+ ++ LI + G ED L + ++ PD+ T + + SCS + L G
Sbjct: 131 PPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVG 190
Query: 92 QQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFH 151
+ + A K G +D V++SLI MY+ CG + + F + V+ W++MIA Y +
Sbjct: 191 RGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKN 250
Query: 152 GKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEH 211
G +E + +F+ M + ++VT +S+ AC G G + +K + R
Sbjct: 251 GDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSR-NL 309
Query: 212 YTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILG-- 269
T +VD+ +CG LD+A L M + + + W ++S A I E+ G
Sbjct: 310 ATALVDMYAKCGELDKARRLFDRMHSR-DVVAWSAMISGYTQSDRCREALAIFNEMQGTE 368
Query: 270 VNPQDAAPYVLLS 282
VNP D +LS
Sbjct: 369 VNPNDVTMVSVLS 381
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 76/162 (46%), Gaps = 5/162 (3%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
L ++ G++L Y K G + + K MP+RN W LI G A NG + + L+ ++
Sbjct: 404 LPLTVILGTALVDFYAKCGCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSREALELFS 463
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSRC 120
M P +TF+ V+ +CS + +G++ + + G + ++ + R
Sbjct: 464 SMLEANIEPTDVTFIGVLLACSHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRA 523
Query: 121 GCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGK---GEEAI 158
G +D++ + + V+W ++++A H GEEA+
Sbjct: 524 GLIDEAYQFIRNMPIEPNAVVWRALLSACTVHKNVEIGEEAL 565
>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 818
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 170/438 (38%), Positives = 261/438 (59%), Gaps = 20/438 (4%)
Query: 7 VAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV 66
V G++L MY +SG + E K + N+++ + + N ++ +
Sbjct: 387 VVGNALVSMYAESGCMEEARKAFDQLYETNILSMSPDVETERNNASCSSKIEGMD----- 441
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
TF S++S+ + + L +GQ++HA +KAG D G+ +SL+SMY+RCG L+D+
Sbjct: 442 -DGVSTFTFASLLSAAASVGLLTKGQKLHALSMKAGFRSDQGISNSLVSMYARCGYLEDA 500
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHC 186
+ F E + +V+ W+S+I+ HG ++A+++F M + NDVT++++L ACSH
Sbjct: 501 CRAFDEMKDHNVISWTSIISGLAKHGYAKQALSMFHDMILAGVKPNDVTYIAVLSACSHV 560
Query: 187 GLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKT 246
GL ++G E F M K + PR+EHY C+VDLL R G ++EA I MP KA+A++WKT
Sbjct: 561 GLVKEGKEHFRSMQKDHGLLPRMEHYACIVDLLARSGLVEEARQFINEMPCKADALVWKT 620
Query: 247 LLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNV 306
LLSAC+T+ +T++ A ++ + P+D APYVLLSN++A A W V+ R MR++N+
Sbjct: 621 LLSACRTYGNTEIGEIAANHVINLEPRDPAPYVLLSNLYADAGLWDEVARIRSLMRDKNL 680
Query: 307 KKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDS 366
KE G+SW+++ N +H+F GD SHP +++I L L E+K GYVPDT +HDM
Sbjct: 681 SKETGLSWMDVGNTIHEFRAGDTSHPLAIDIYAKLVTLIREIKDIGYVPDTSIVLHDMSE 740
Query: 367 EEKEYNLKHHSEKLAIAFAEHTRGLIVML--------------PFKYISEIKNREIIVRD 412
E KE L HSEK+A+AF T + KYIS+ REII+RD
Sbjct: 741 ELKEQYLLQHSEKIAVAFGLITTSATKPMRIFKNLRVCADCHSAIKYISKSTGREIILRD 800
Query: 413 ASRFHHFRNGKCSCGDYW 430
++RFH ++G CSCG+YW
Sbjct: 801 SNRFHRMKDGICSCGEYW 818
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 143/313 (45%), Gaps = 16/313 (5%)
Query: 1 GFELDLVAGSSLAHMYMK---SGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAED-V 56
G D L MY K S+ KV + MP NV++W LI+G Q+G+ E+ V
Sbjct: 276 GLVSDSCVSCGLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNV 335
Query: 57 LDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISM 116
+ + M RP+ IT+ +++ +C+ L+ G+QIHA V+K + V ++L+SM
Sbjct: 336 MALFREMLNESIRPNHITYSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSM 395
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
Y+ GC++++ K F + ++++ S + + I E + + TF
Sbjct: 396 YAESGCMEEARKAFDQLYETNILSMSPDVETERNNASCSSKI------EGMDDGVSTFTF 449
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM 235
SLL A + GL KG + L +K +R + + +V + RCGYL++A M
Sbjct: 450 ASLLSAAASVGLLTKGQKLHALSMKAGFRSDQGISN--SLVSMYARCGYLEDACRAFDEM 507
Query: 236 PVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQG 293
N I W +++S H A + +++ GV P D +LS +G
Sbjct: 508 K-DHNVISWTSIISGLAKHGYAKQALSMFHDMILAGVKPNDVTYIAVLSACSHVGLVKEG 566
Query: 294 VSEFREAMRERNV 306
FR ++ +
Sbjct: 567 KEHFRSMQKDHGL 579
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 100/195 (51%), Gaps = 4/195 (2%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ G +L M+ ++G LV ++V + R + W LI Q G A V++ + M
Sbjct: 179 DVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQAGCASKVVELFLHML 238
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG--- 121
GF PD + S+IS+C+EL ++ GQQ+H+ ++ G D V L+ MY++
Sbjct: 239 DDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKMER 298
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAI-NLFEQMEQKEFEANDVTFVSLL 180
++ + K F +V+ W+++I+ Y G E + LF +M + N +T+ +LL
Sbjct: 299 SMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREMLNESIRPNHITYSNLL 358
Query: 181 YACSHCGLKEKGMEF 195
AC++ ++ G +
Sbjct: 359 KACANLSDQDSGRQI 373
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 97/179 (54%), Gaps = 17/179 (9%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D +SL MY + G L + + M NVI+W ++I+G A++G A+ L +
Sbjct: 476 GFRSDQGISNSLVSMYARCGYLEDACRAFDEMKDHNVISWTSIISGLAKHGYAKQALSMF 535
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVI------SSLI 114
+ M + G +P+ +T+++V+S+CS + + +G++ + K D G++ + ++
Sbjct: 536 HDMILAGVKPNDVTYIAVLSACSHVGLVKEGKEHFRSMQK-----DHGLLPRMEHYACIV 590
Query: 115 SMYSRCGCLDDSVKTFLE--CEYSDVVLWSSMIAA---YGFHGKGEEAINLFEQMEQKE 168
+ +R G ++++ + E C+ +D ++W ++++A YG GE A N +E ++
Sbjct: 591 DLLARSGLVEEARQFINEMPCK-ADALVWKTLLSACRTYGNTEIGEIAANHVINLEPRD 648
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 124/308 (40%), Gaps = 42/308 (13%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVI-RLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
+ D V +SL MY K G++ +V ++ +R++++W + + A+NG + L
Sbjct: 72 LDTDAVVANSLLTMYSKCGAVEAARRVFDQMCGVRDLVSWTAMASCLARNGAERESLRLL 131
Query: 61 NLMRMVGFRPDKITFVSVISSC--SELATLGQGQQIHAEVVKAGA-SLDVGVISSLISMY 117
M +G RP+ T + +C EL L G + V+K G DV V +LI M+
Sbjct: 132 GEMLELGLRPNAFTLCAAARACFPQELFRLA-GGVVLGFVLKTGFWGTDVSVGCALIDMF 190
Query: 118 SRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
+R G L + + F V+W+ +I Y G + + LF M FE + +
Sbjct: 191 ARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQAGCASKVVELFLHMLDDGFEPDGYSMS 250
Query: 178 SLLYACSHCGLKEKGMEFFDL------------------MVKKYRRKPRLEHYTCVVDLL 219
S++ AC+ G G + + M K + + +EH V +
Sbjct: 251 SMISACTELGSVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKMERSMEHARKVFKTM 310
Query: 220 GR----------CGYL------DEAAALIRNM---PVKANAIIWKTLLSACKTHKSTDMA 260
R GY+ + AL R M ++ N I + LL AC D
Sbjct: 311 PRHNVMSWTALISGYVQSGVQENNVMALFREMLNESIRPNHITYSNLLKACANLSDQDSG 370
Query: 261 GRIAEEIL 268
+I +L
Sbjct: 371 RQIHAHVL 378
>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Glycine max]
Length = 673
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 167/409 (40%), Positives = 252/409 (61%), Gaps = 13/409 (3%)
Query: 35 RNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQI 94
+++++W +I+ +N + +D Y M PD IT SV+ +C +L+ L G++I
Sbjct: 265 KSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVLRACGDLSALLLGRRI 324
Query: 95 HAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKG 154
H V + ++ + +SLI MY+RCGCL+D+ + F ++ DV W+S+I+AYG G+G
Sbjct: 325 HEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFRDVASWTSLISAYGMTGQG 384
Query: 155 EEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC 214
A+ LF +M+ + + FV++L ACSH GL +G +F M Y+ P +EH+ C
Sbjct: 385 YNAVALFTEMQNSGQSPDSIAFVAILSACSHSGLLNEGKFYFKQMTDDYKITPIIEHFAC 444
Query: 215 VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQD 274
+VDLLGR G +DEA +I+ MP+K N +W LLS+C+ + + D+ A+++L + P++
Sbjct: 445 LVDLLGRSGRVDEAYNIIKQMPMKPNERVWGALLSSCRVYSNMDIGILAADKLLQLAPEE 504
Query: 275 AAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRS 334
+ YVLLSNI+A A RW V+ R M+ R ++K PG+S +E+ NQVH F GD HP+S
Sbjct: 505 SGYYVLLSNIYAKAGRWTEVTAIRSLMKRRRIRKMPGISNVELNNQVHTFLAGDTYHPQS 564
Query: 335 MEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFA--------- 385
EI L L +MK GYVP T + +HD++ E+KE +L HSEKLAI FA
Sbjct: 565 KEIYEELSVLVGKMKELGYVPKTDSALHDVEEEDKECHLAVHSEKLAIVFAILNTQESPI 624
Query: 386 EHTRGLIVM----LPFKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
T+ L V + K IS+I REI++RD +RFHHF++G CSCGDYW
Sbjct: 625 RITKNLRVCGDCHIAAKLISKIVQREIVIRDTNRFHHFKDGICSCGDYW 673
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 129/288 (44%), Gaps = 29/288 (10%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G L Y G V ++P RNVI + +I N L +D L + M GF
Sbjct: 70 GIKLMRAYAARGEPGLARNVFDVIPERNVIFYNVMIRSYMNNHLYDDALLVFRDMVSGGF 129
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
PD T+ V+ +CS L G Q+H V K G L++ V + LI++Y +CGCL ++
Sbjct: 130 SPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARC 189
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHC-- 186
E + DVV W+SM+A Y + + ++A+++ +M+ + + T SLL A ++
Sbjct: 190 VLDEMQSKDVVSWNSMVAGYAQNMQFDDALDICREMDGVRQKPDACTMASLLPAVTNTSS 249
Query: 187 -----------GLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM 235
L++K + +++M+ Y + + +G+C
Sbjct: 250 ENVLYVEEMFMNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKC------------- 296
Query: 236 PVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSN 283
V+ +AI ++L AC + + RI E V + P +LL N
Sbjct: 297 EVEPDAITCASVLRACGDLSALLLGRRIHEY---VERKKLCPNMLLEN 341
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 112/250 (44%), Gaps = 35/250 (14%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +L+L G+ L +Y K G L E V+ M ++V++W +++AG AQN +D LD
Sbjct: 163 GLDLNLFVGNGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQNMQFDDALDIC 222
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M V +PD T S++ + V +S +V + +
Sbjct: 223 REMDGVRQKPDACTMASLLPA-----------------VTNTSSENVLYVEEM------- 258
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
F+ E +V W+ MI+ Y + ++++L+ QM + E E + +T S+L
Sbjct: 259 ---------FMNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVL 309
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC G + V++ + P + ++D+ RCG L++A + M + +
Sbjct: 310 RACGDLSALLLGRRIHEY-VERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFR-D 367
Query: 241 AIIWKTLLSA 250
W +L+SA
Sbjct: 368 VASWTSLISA 377
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 81/179 (45%), Gaps = 33/179 (18%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
+++ +SL MY + G L + ++V M R+V +W +LI+ G + + + M+
Sbjct: 336 NMLLENSLIDMYARCGCLEDAKRVFDRMKFRDVASWTSLISAYGMTGQGYNAVALFTEMQ 395
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G PD I FV+++S+CS L +G+ ++ D I+ +I ++ CL
Sbjct: 396 NSGQSPDSIAFVAILSACSHSGLLNEGKFYFKQMT------DDYKITPIIEHFA---CLV 446
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
D + G G+ +EA N+ +QM K N+ + +LL +C
Sbjct: 447 DLL---------------------GRSGRVDEAYNIIKQMPMK---PNERVWGALLSSC 481
>gi|449477579|ref|XP_004155062.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Cucumis sativus]
Length = 602
Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 169/446 (37%), Positives = 269/446 (60%), Gaps = 16/446 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + D + +S+ +Y G E K+ +P ++V+AW LI+ +N D L +
Sbjct: 157 GHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLF 216
Query: 61 NLMRMVGF--RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
+M+ + +PDK+T + ++ +C++L L G++IH + + G + + + +SLISMYS
Sbjct: 217 EIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESNLCNSLISMYS 276
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
RCG +D + + F + +VV WS+MI+ +G G EAI F +M++ E D TF +
Sbjct: 277 RCGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTA 336
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+L ACSHCGL ++GM FFD M +++ P + HY C+VDLLGR G LD+A LI +M V+
Sbjct: 337 VLSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVR 396
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
+A +W+TLL AC+ H ++ RI E ++ + Q+A YVLL NI++SA W V+E R
Sbjct: 397 PDATMWRTLLGACRIHGHGNLGERIVEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELR 456
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
+ M+E+ + P + +E+ VHQF + D SHP +I L+E+ ++K+ GY +
Sbjct: 457 KLMKEKGIYTTPCCTTIELNGVVHQFAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMS 516
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAF-------------AEHTRGLIVMLPF-KYISEIK 404
+++H ++ ++K Y L +HSEKLAIAF A + R + F KYIS +
Sbjct: 517 SELHRLEPKDKGYALSNHSEKLAIAFGVLATPPGRTIRIANNIRTCMDCHNFAKYISSVY 576
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
NR+++VRD SRFHHF+ G+CSC D+W
Sbjct: 577 NRKVVVRDRSRFHHFQEGRCSCNDFW 602
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 108/234 (46%), Gaps = 14/234 (5%)
Query: 57 LDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISM 116
L Y M G R D ++ + SC +L +L G QIHA + G D +++S++ +
Sbjct: 112 LYMYRDMERQGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIFINGHQADSLLLTSMMDL 171
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEF--EANDV 174
YS CG +++ K F E DVV W+ +I+ + + +A+ LFE M+ + + + V
Sbjct: 172 YSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYLCQPDKV 231
Query: 175 TFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRN 234
T + LL AC+ E G E ++++ ++ + RCG +D+A +
Sbjct: 232 TCLLLLQACADLNALEFG-ERIHGYIQQHGYNTESNLCNSLISMYSRCGRMDKAYEVFDK 290
Query: 235 MPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL------GVNPQDAAPYVLLS 282
M K N + W ++S S + GR A E GV P D +LS
Sbjct: 291 MTEK-NVVSWSAMISGL----SMNGHGREAIEAFWEMQKNGVEPGDHTFTAVLS 339
>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
Length = 2355
Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 172/438 (39%), Positives = 259/438 (59%), Gaps = 15/438 (3%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E +LV+ S++ Y + G+L E ++ MP+RNV++W +IAG AQN D ++ +
Sbjct: 221 EKNLVSWSTMISGYARVGNLEEARQLFENMPMRNVVSWNAMIAGYAQNEKYADAIELFRQ 280
Query: 63 MRMVG-FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M+ G P+ +T VSV+S+C+ L L G+ IH + + + + + ++L MY++CG
Sbjct: 281 MQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCG 340
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
C+ ++ F E DV+ WS +I +G EA N F +M + E ND++F+ LL
Sbjct: 341 CVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLT 400
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
AC+H GL +KG+E+FD+M + Y P++EHY CVVDLL R G LD+A +LI +MP++ N
Sbjct: 401 ACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNV 460
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
I+W LL C+ +K + R+ IL ++ + V L+N++AS R + R M
Sbjct: 461 IVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANVYASMGRLDDAASCRLRM 520
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
R+ K PG SW+EI N V++F MGD SHP+S+ I + EL +MK+ GY P T +
Sbjct: 521 RDNKSMKTPGCSWIEINNSVYEFFMGDSSHPQSLRIYSMIRELKWKMKVAGYKPKTDLVI 580
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNRE 407
H++D EEKE L HSEKLA+AF + G + + K IS+I RE
Sbjct: 581 HNIDEEEKEDALSTHSEKLALAFGLINTSEGTTIRIVKNLRVCNDCHDAIKIISKIVERE 640
Query: 408 IIVRDASRFHHFRNGKCS 425
I+VRD SRFHHF++GKCS
Sbjct: 641 IVVRDRSRFHHFKDGKCS 658
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 130/285 (45%), Gaps = 44/285 (15%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E +L +SL +Y K G +K+ M +R+V++W TLI+G +G+ +
Sbjct: 157 GCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGMVDKA---- 212
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
RMV D + +++S S++IS Y+R
Sbjct: 213 ---RMVF---DGMMEKNLVS-----------------------------WSTMISGYARV 237
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQK-EFEANDVTFVSL 179
G L+++ + F +VV W++MIA Y + K +AI LF QM+ + NDVT VS+
Sbjct: 238 GNLEEARQLFENMPMRNVVSWNAMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVSV 297
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L AC+H G + G ++ +++ + + L + D+ +CG + EA + M +
Sbjct: 298 LSACAHLGALDLG-KWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHER- 355
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLS 282
+ I W ++ + + A E++ G+ P D + LL+
Sbjct: 356 DVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLT 400
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 99/222 (44%), Gaps = 43/222 (19%)
Query: 31 LMPIRNVIAWITLIAGKAQNGLAEDVLDQYN--LMRMVGFRPDKITFVSVISSCSELATL 88
+ N+ A+ L+ +Q+ + +N L+ PD+ TF SV+ +C+ LA +
Sbjct: 84 FLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQV 143
Query: 89 GQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAY 148
+GQ++H V K G ++ V +SL+ +Y + GC + K F E DVV W+++I+ Y
Sbjct: 144 LEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGY 203
Query: 149 GFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPR 208
F G ++A +F+ G+ EK + + M+ Y
Sbjct: 204 CFSGMVDKARMVFD------------------------GMMEKNLVSWSTMISGY----- 234
Query: 209 LEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
R G L+EA L NMP++ N + W +++
Sbjct: 235 -----------ARVGNLEEARQLFENMPMR-NVVSWNAMIAG 264
>gi|224121210|ref|XP_002318526.1| predicted protein [Populus trichocarpa]
gi|222859199|gb|EEE96746.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 169/419 (40%), Positives = 252/419 (60%), Gaps = 26/419 (6%)
Query: 32 MPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQG 91
MP R+ I+W +IAG +QNG +E+ L + M+ R ++ +F +S+CS +A L G
Sbjct: 140 MPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTCALSTCSNIAALELG 199
Query: 92 QQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFH 151
+Q+H +VKAG V ++L++MY +CG +D++ F E DVV W++MI Y H
Sbjct: 200 RQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKDVVSWNTMIHGYARH 259
Query: 152 GKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEH 211
G GEEA+ +FE M+ +D T VS+L ACSH GL ++G E+F M + Y +L H
Sbjct: 260 GFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQGSEYFYSMNRDYGITAKLVH 319
Query: 212 YTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVN 271
YTC+VDLLGR G L+EA L++NMP + +A W LL A + H +T++ + A+ I +
Sbjct: 320 YTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAQIIFEME 379
Query: 272 PQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSH 331
P ++ Y+LLS ++A++ RW + R MR + VKK PG SWLE++N++H F +GD SH
Sbjct: 380 PHNSGMYILLSKLYAASGRWSDAGKMRLEMRNKGVKKVPGYSWLEVQNKIHTFKVGDTSH 439
Query: 332 PRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGL 391
P + +I +LEE+ ++K GY+ T HD++ EEK + LK+HSEKLA+A+
Sbjct: 440 PHTDKIYTFLEEMDLKLKQEGYISSTNLVFHDVEEEEKVHMLKYHSEKLAVAYG------ 493
Query: 392 IVMLP--------------------FKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
I+ +P KYIS+I R II+RD RFH+F G CSC D+W
Sbjct: 494 ILYIPAGRPIRVIKNLRVCEDCHNAIKYISKIVGRLIILRDNHRFHYFEGGSCSCRDFW 552
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 93/189 (49%), Gaps = 7/189 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G++ G++L MY K GS+ E + + ++V++W T+I G A++G E+ L +
Sbjct: 210 GYQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKDVVSWNTMIHGYARHGFGEEALTVF 269
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVK-AGASLDVGVISSLISMYSR 119
LM+ G RPD T VSV+++CS + QG + + + G + + + ++ + R
Sbjct: 270 ELMKTTGIRPDDATMVSVLAACSHAGLVDQGSEYFYSMNRDYGITAKLVHYTCMVDLLGR 329
Query: 120 CGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGK---GEEAINLFEQMEQKEFEANDVT 175
G L+++ + D W +++ A HG GE+A + +ME +
Sbjct: 330 AGQLEEAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAQIIFEMEPH--NSGMYI 387
Query: 176 FVSLLYACS 184
+S LYA S
Sbjct: 388 LLSKLYAAS 396
>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 170/441 (38%), Positives = 263/441 (59%), Gaps = 15/441 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D V S++ Y + G + E +V ++++ W ++ G A+NG ED L +N M
Sbjct: 255 DQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEML 314
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+ PD T SV+SSC++LA+L GQ +H + + AG + ++ V S+LI MYS+CG +D
Sbjct: 315 LEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFID 374
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D+ F +VV W++MI +G ++A+ LFE M Q++F+ ++VTF+ +L AC
Sbjct: 375 DARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACL 434
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
HC E+G E+FD + ++ P L+HY C+V+LLGR G +++A ALI+NM + +IW
Sbjct: 435 HCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIW 494
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
TLLS C T A A + ++P A PY++LSN++AS RW+ V+ R M+ +
Sbjct: 495 STLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSK 554
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
NVKK G SW+EI N+VH+FT D++HP S +I L L +++ G+ P+T +HD+
Sbjct: 555 NVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQEEGFTPNTNLVLHDV 614
Query: 365 DSEEKEYNLKHHSEKLAIAFA--EHTRGL--IVMLP-----------FKYISEIKNREII 409
+EK ++ HSEKLA+AF + G+ I ++ K+ S I R+II
Sbjct: 615 GEDEKFKSICFHSEKLALAFGLIKKPNGISPIRIIKNIRICNDCHEFMKFASRIIGRQII 674
Query: 410 VRDASRFHHFRNGKCSCGDYW 430
+RD++RFHHF GKCSC D W
Sbjct: 675 LRDSNRFHHFSTGKCSCNDNW 695
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 143/329 (43%), Gaps = 66/329 (20%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ + ++L Y KSGS+ + MP R+ +++ T IAG + N ++ L+ + M+
Sbjct: 88 DIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQ 147
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
GF P + T VS++++ ++L+ L G+QIH ++ +V + ++L MY++CG ++
Sbjct: 148 REGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIE 207
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ F ++V W+ MI+ Y +G+ E+ I L QM + VT +++ A
Sbjct: 208 QARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYC 267
Query: 185 HCG-----------LKEKGMEFFDLMVKKYRRKPR------------LEH-----YT--- 213
CG KEK + + M+ Y + R LEH YT
Sbjct: 268 QCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSS 327
Query: 214 ----------------------------------CVVDLLGRCGYLDEAAALIRNMPVKA 239
++D+ +CG++D+A ++ MP +
Sbjct: 328 VVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTR- 386
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEIL 268
N + W ++ C + A + E +L
Sbjct: 387 NVVSWNAMIVGCAQNGHDKDALELFENML 415
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 80/148 (54%), Gaps = 2/148 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +L+ S+L MY K G + + V LMP RNV++W +I G AQNG +D L+ +
Sbjct: 352 GLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELF 411
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVV-KAGASLDVGVISSLISMYSR 119
M F+PD +TF+ ++S+C + QGQ+ + + G + + + ++++ R
Sbjct: 412 ENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGR 471
Query: 120 CGCLDDSVKTFLECEYS-DVVLWSSMIA 146
G ++ +V + D ++WS++++
Sbjct: 472 TGRIEQAVALIKNMAHDPDFLIWSTLLS 499
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 170/444 (38%), Positives = 260/444 (58%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G LD++ G++L MY K G + + + M ++ +++ +++G QNG A L +
Sbjct: 342 GSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIF 401
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+M++ G PD T + V+ +CS LA L G H ++ G + D + ++LI MYS+C
Sbjct: 402 RMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKC 461
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + + F + D+V W++MI YG HG G EA+ LF + + +D+TF+ LL
Sbjct: 462 GKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLL 521
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
+CSH GL +G +FD M + + PR+EH C+VD+LGR G +DEA IRNMP + +
Sbjct: 522 SSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPD 581
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
IW LLSAC+ HK+ ++ ++++I + P+ +VLLSNI+++A RW + R
Sbjct: 582 VRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRIT 641
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
++ +KK PG SW+EI VH F GD+SH + +I+ LEEL EMK GY +
Sbjct: 642 QKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECSFV 701
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA----EHTRGLIVM----------LPFKYISEIKNR 406
D++ EEKE L +HSEKLAIAF + R ++V K+++ I R
Sbjct: 702 FQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCGDCHTAIKFMTLITKR 761
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EI VRDA+RFHHF+NG C+CGD+W
Sbjct: 762 EITVRDANRFHHFKNGTCNCGDFW 785
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 154/309 (49%), Gaps = 7/309 (2%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F+ +V G+ L MY K L+ K+ +M +RN ++W +I G + ++ L+ ++
Sbjct: 241 FDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFD 300
Query: 62 LMRMV-GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M + P +T SV+ +C++L L +G+++H ++K G+ LD+ + ++L+SMY++C
Sbjct: 301 QMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKC 360
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +DD+++ F E D V +S++++ +G A+++F M+ + + T + +L
Sbjct: 361 GVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVL 420
Query: 181 YACSHCGLKEKGM-EFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
ACSH + G L+V+ + + ++D+ +CG + A + M +
Sbjct: 421 PACSHLAALQHGFCSHGYLIVRGFATDTLI--CNALIDMYSKCGKISFAREVFNRMD-RH 477
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLSNIHASAKRWQGVSEF 297
+ + W ++ H A + ++ LG+ P D LLS+ S +G F
Sbjct: 478 DIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWF 537
Query: 298 REAMRERNV 306
R+ ++
Sbjct: 538 DAMSRDFSI 546
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 137/277 (49%), Gaps = 9/277 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E D+ ++L Y K G LVE +++ M R+V+AW +IAG + GL +D +
Sbjct: 139 GLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLI 198
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVI--SSLISMYS 118
M+ G P+ T V V+ + E LG G+ +H V+ S D GV+ + L+ MY+
Sbjct: 199 MQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRR--SFDNGVVVGTGLLDMYA 256
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE-FEANDVTFV 177
+C CL + K F + V WS+MI Y +EA+ LF+QM K+ + VT
Sbjct: 257 KCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLG 316
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
S+L AC+ +G + ++K L T ++ + +CG +D+A M
Sbjct: 317 SVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNT-LLSMYAKCGVIDDAIRFFDEMNP 375
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRIAE--EILGVNP 272
K +++ + ++S C + + +A I ++ G++P
Sbjct: 376 K-DSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDP 411
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 128/278 (46%), Gaps = 2/278 (0%)
Query: 12 LAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPD 71
L +Y+ +V ++ +P +VI W +I A NG + +D Y+ M +G RP+
Sbjct: 49 LTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPN 108
Query: 72 KITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFL 131
K T+ V+ +CS L + G +IH+ G DV V ++L+ Y++CG L ++ + F
Sbjct: 109 KYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFS 168
Query: 132 ECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEK 191
+ DVV W++MIA +G ++A+ L QM+++ N T V +L
Sbjct: 169 SMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGH 228
Query: 192 GMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSAC 251
G V++ + T ++D+ +C L A + M V+ N + W ++
Sbjct: 229 GKALHGYCVRRSFDNGVVVG-TGLLDMYAKCQCLLYARKIFDVMGVR-NEVSWSAMIGGY 286
Query: 252 KTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAK 289
A + ++++ + D P L S + A AK
Sbjct: 287 VASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAK 324
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 101/215 (46%), Gaps = 4/215 (1%)
Query: 72 KITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFL 131
K ++ ++ +C + +L + ++IH +K ++ D V+ L +Y C + + + F
Sbjct: 8 KNNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFD 67
Query: 132 ECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEK 191
E V+LW+ +I AY ++G + AI+L+ M N T+ +L ACS E
Sbjct: 68 EIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIED 127
Query: 192 GMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSAC 251
G+E K + + + T +VD +CG L EA L +M + + + W +++ C
Sbjct: 128 GVEIHS-HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHR-DVVAWNAMIAGC 185
Query: 252 KTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNI 284
+ D A ++ ++ G+ P + +L +
Sbjct: 186 SLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTV 220
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 171/441 (38%), Positives = 268/441 (60%), Gaps = 15/441 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
DLV + + +Y + G++ ++ L+ ++V++W ++I+ NGLA + L+ ++LM+
Sbjct: 553 DLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMK 612
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G PD I+ VS++S+ + L+ L +G++IH +++ G L+ + S+L+ MY+RCG L+
Sbjct: 613 ETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLE 672
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
S F D+VLW+SMI AYG HG G AI+LF +ME + + + FV++LYACS
Sbjct: 673 KSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACS 732
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL +G F + M +Y+ +P EHY C+VDLLGR +L+EA ++ M V+ A +W
Sbjct: 733 HSGLMNEGRRFLESMKYEYQLEPWPEHYVCLVDLLGRANHLEEAYQFVKGMEVEPTAEVW 792
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
LL AC+ H + ++ A+++L ++P++ YVL+SN++A+ +RW+ V E R M+
Sbjct: 793 CALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYAAERRWKDVEEVRMRMKAS 852
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEM-KLRGYVPDTGADMHD 363
+KK PG SW+E+ N+VH F DKSHP+S EI L ++T ++ K GYV T +H+
Sbjct: 853 GLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLAKEGGYVAQTKFVLHN 912
Query: 364 MDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPF--------------KYISEIKNREII 409
EEK L HSE+LAIA+ T L K IS+ RE++
Sbjct: 913 AKEEEKVQMLYGHSERLAIAYGMLTTPEGASLRITKNLRVCGDCHNFCKLISKFFERELV 972
Query: 410 VRDASRFHHFRNGKCSCGDYW 430
+RDA+RFHHF+ G CSCGD W
Sbjct: 973 MRDANRFHHFKGGVCSCGDVW 993
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 148/271 (54%), Gaps = 9/271 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + DL G+SL MY K S+ + + MP ++V++W T+IAG AQNG L+ +
Sbjct: 449 GLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELF 508
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+++ G D + S++ +CS L + ++IH+ +++ G S D+ + + ++ +Y C
Sbjct: 509 REVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLS-DLVLQNGIVDVYGEC 567
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +D + + F E+ DVV W+SMI+ Y +G EA+ LF M++ E + ++ VS+L
Sbjct: 568 GNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSIL 627
Query: 181 YACSHCGLKEKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
A + +KG E +++K + + L + +VD+ RCG L+++ + N
Sbjct: 628 SAAASLSALKKGKEIHGFLIRKGFVLEGSLA--STLVDMYARCGTLEKSRNVF-NFIRNK 684
Query: 240 NAIIWKTLLSACKTH----KSTDMAGRIAEE 266
+ ++W ++++A H + D+ R+ +E
Sbjct: 685 DLVLWTSMINAYGMHGCGRAAIDLFRRMEDE 715
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 118/242 (48%), Gaps = 3/242 (1%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+ L MY K G LV+ EK+ MP + + W +I NG L+ Y MR+ G
Sbjct: 154 TRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIP 213
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
D TF ++ +C L G ++H +K G V V +S++ MY++C L+ + +
Sbjct: 214 LDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQL 273
Query: 130 FLEC-EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F E DVV W+SMI+AY +G+ EA+ LF +M++ N TFV+ L AC
Sbjct: 274 FDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSF 333
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
++GM F V K + ++ + R G + EAA + NM + I W ++L
Sbjct: 334 IKQGM-FIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMD-DWDTISWNSML 391
Query: 249 SA 250
S
Sbjct: 392 SG 393
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 130/268 (48%), Gaps = 3/268 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIR-NVIAWITLIAGKAQNGLAEDVLDQ 59
G+ + +S+ MY K L ++ MP + +V++W ++I+ + NG + + L
Sbjct: 246 GYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRL 305
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ M+ P+ TFV+ + +C + + + QG IHA V+K+ ++V V ++LI+MY+R
Sbjct: 306 FGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYAR 365
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G + ++ F + D + W+SM++ + +G EA+ + +M + + V +S+
Sbjct: 366 FGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISI 425
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
+ A + G GM+ +K L+ +VD+ + + + MP K
Sbjct: 426 IAASARSGNTLNGMQIHAYAMKN-GLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDK- 483
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEI 267
+ + W T+++ + S A + E+
Sbjct: 484 DVVSWTTIIAGHAQNGSHSRALELFREV 511
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 95/195 (48%), Gaps = 2/195 (1%)
Query: 74 TFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISS-LISMYSRCGCLDDSVKTFLE 132
+ SV+ C L +GQQ+HA ++ + A + +S+ L+ MY +CGCL D+ K F
Sbjct: 116 AYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDG 175
Query: 133 CEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKG 192
+ + W++MI AY +G+ ++ L+ +M + TF +L AC + G
Sbjct: 176 MPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCG 235
Query: 193 MEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACK 252
E L +K+ + +V + +C L+ A L MP K + + W +++SA
Sbjct: 236 AEVHGLAIKEGYVSIVFVANS-IVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYS 294
Query: 253 THKSTDMAGRIAEEI 267
++ + A R+ E+
Sbjct: 295 SNGQSIEALRLFGEM 309
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF L+ S+L MY + G+L + V + ++++ W ++I +G +D +
Sbjct: 650 GFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLF 709
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQI 94
M PD I FV+V+ +CS + +G++
Sbjct: 710 RRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRF 743
>gi|414590987|tpg|DAA41558.1| TPA: hypothetical protein ZEAMMB73_311644 [Zea mays]
Length = 575
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 165/442 (37%), Positives = 261/442 (59%), Gaps = 14/442 (3%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E D+V+ +++ H Y +G + +V M R+ +W ++++ + ++D L+ +
Sbjct: 134 ERDMVSWNTMIHGYAVNGEVDLAREVFNGMDDRDAFSWSSMMSAYTKGRRSKDALELWRE 193
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
MR PD T VSV+S+CS++ L G ++H V G LDV + ++LI MY++CG
Sbjct: 194 MRAACVNPDCTTMVSVLSACSDMGALAVGAEVHQFVESNGVELDVKLGTALIDMYAKCGD 253
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
+++SV+ F DV+ WSSMI HG G +A++LF +M + + N+VTF+ +L +
Sbjct: 254 IENSVRVFHSMPVKDVLTWSSMIIGLANHGFGHDALSLFSRMLSEGLQPNEVTFIGVLIS 313
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
C+H GL G ++F M + P+++HY C+VDLLGR G+++EA LIR+MP + +A+
Sbjct: 314 CTHLGLVSDGKKYFSSMSVVHGVTPKVQHYGCMVDLLGRSGHIEEAKQLIRDMPFEPDAV 373
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMR 302
IW+ LL AC+ +K+ ++A ++ ++P YVLLSNI+A A W+GV+E R +R
Sbjct: 374 IWRALLGACRIYKNVEVAEEAMAKLRVLDPHADGHYVLLSNIYAQANSWEGVAEMRRTLR 433
Query: 303 ERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMH 362
+++ PG S +E +N +H+F GD+SHPRS EI L E+ ++ GY P TG +
Sbjct: 434 RERIQRIPGRSSIEWQNTIHEFISGDRSHPRSKEIYKMLGEMMDRLRQAGYKPMTGLVLQ 493
Query: 363 DMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVML--------------PFKYISEIKNREI 408
D+D + KE L HSEKLA+AF T L K I+ + R++
Sbjct: 494 DIDEQSKERALAEHSEKLAVAFGLLTTPAGSTLRITKNLRACEDCHSAIKLIALLYERKL 553
Query: 409 IVRDASRFHHFRNGKCSCGDYW 430
I+RD +RFHHF G+CSC DYW
Sbjct: 554 IIRDRNRFHHFSEGRCSCKDYW 575
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 81/149 (54%), Gaps = 2/149 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G ELD+ G++L MY K G + +V MP+++V+ W ++I G A +G D L +
Sbjct: 233 GVELDVKLGTALIDMYAKCGDIENSVRVFHSMPVKDVLTWSSMIIGLANHGFGHDALSLF 292
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEV-VKAGASLDVGVISSLISMYSR 119
+ M G +P+++TF+ V+ SC+ L + G++ + + V G + V ++ + R
Sbjct: 293 SRMLSEGLQPNEVTFIGVLISCTHLGLVSDGKKYFSSMSVVHGVTPKVQHYGCMVDLLGR 352
Query: 120 CGCLDDSVKTFLECEY-SDVVLWSSMIAA 147
G ++++ + + + D V+W +++ A
Sbjct: 353 SGHIEEAKQLIRDMPFEPDAVIWRALLGA 381
>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Brachypodium distachyon]
Length = 940
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 167/447 (37%), Positives = 263/447 (58%), Gaps = 25/447 (5%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
LDLV + + +Y + G + K+ + ++++ W ++I A +GL + L + M
Sbjct: 499 LDLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSGLLNEALVLFAEM 558
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
+ +PD + VS++ + L++L +G+++H +++ ++ ++SSL+ MYS CG L
Sbjct: 559 QSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIVSSLVDMYSGCGSL 618
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
++K F + D+VLW++MI A G HG G++AI+LF++M Q + V+F++LLYAC
Sbjct: 619 SGALKVFNAVKCKDMVLWTAMINATGMHGHGKQAIDLFKRMLQTGVTPDHVSFLALLYAC 678
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
SH L +G + D+M+ YR +P EHY CVVDLLGR G +EA I++MP+K +++
Sbjct: 679 SHSKLVNEGKCYLDMMMSTYRLEPWQEHYACVVDLLGRSGQTEEAYEFIKSMPLKPKSVV 738
Query: 244 WKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
W +LL AC+ HK+ ++A A +L + P + YVL+SN+ A +W E R + E
Sbjct: 739 WCSLLGACRVHKNHELAVVAANRLLELEPDNPGNYVLVSNVFAEMGKWNNAKEVRARISE 798
Query: 304 RNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEM-KLRGYVPDTGADMH 362
R ++K+P SW+EI N VH FT D SH + I+L L E+T + K GY DT + +H
Sbjct: 799 RGLRKDPACSWIEIGNNVHTFTTRDNSHRDAERINLKLAEITERLRKEGGYTEDTRSVLH 858
Query: 363 DMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEI 403
D+ EEK L HSE+LAI+F GLI P K +S++
Sbjct: 859 DVSEEEKVDVLHRHSERLAISF-----GLINTRPGMPLRIAKNLRVCGDCHEFTKLVSKL 913
Query: 404 KNREIIVRDASRFHHFRNGKCSCGDYW 430
+R+I+VRDA+RFHHF G CSCGD+W
Sbjct: 914 FDRDIVVRDANRFHHFSGGSCSCGDFW 940
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 134/254 (52%), Gaps = 12/254 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLM-PIRNVIAWITLIAGKAQNGLAEDVLDQ 59
G + ++L MY K G L +V LM R+V +W ++I+G QNG+ LD
Sbjct: 194 GLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDL 253
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ M+ + T V V+ C+ELA L G+++HA ++K+G+ +++ ++L+ MY++
Sbjct: 254 FRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVNIQC-NALLVMYTK 312
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG +D +++ F E + D + W+SM++ Y +G EAI +M + F+ + VSL
Sbjct: 313 CGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSL 372
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV----VDLLGRCGYLDEAAALIRNM 235
A H G G E V Y K RL+ T V +D+ +C Y++ +A + M
Sbjct: 373 SSAVGHLGWLLNGKE-----VHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRM 427
Query: 236 PVKANAIIWKTLLS 249
+K + I W T+++
Sbjct: 428 RIK-DHISWTTIIT 440
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 134/281 (47%), Gaps = 9/281 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D G++L MYMK + V M I++ I+W T+I AQ+ + L+ + +
Sbjct: 400 DTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQ 459
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G + D + S++ +CS L T+ +Q+H ++ G LD+ V + +I +Y CG +
Sbjct: 460 KEGIKVDPMMIGSILEACSGLETILLAKQLHCYAIRNGL-LDLVVKNRIIDIYGECGEVY 518
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
S+K F E D+V W+SMI Y G EA+ LF +M+ + + + V VS+L A
Sbjct: 519 HSLKMFETVEQKDIVTWTSMINCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIG 578
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEH--YTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
KG E ++ RR +E + +VD+ CG L A + + K + +
Sbjct: 579 GLSSLAKGKEVHGFLI---RRNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCK-DMV 634
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLL 281
+W +++A H A + + +L GV P + LL
Sbjct: 635 LWTAMINATGMHGHGKQAIDLFKRMLQTGVTPDHVSFLALL 675
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 113/254 (44%), Gaps = 17/254 (6%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D + L MY K G + + + M R V +W LI +G A + L Y MR
Sbjct: 94 DGFLATKLLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMR 153
Query: 65 MV---GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
+ G PD T SV+ + G ++H VK G V ++LI+MY++CG
Sbjct: 154 LSAASGVAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCG 213
Query: 122 CLDDSVKTF-LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
LD +++ F L + DV W+SMI+ +G +A++LF M++ N T V +L
Sbjct: 214 ILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVL 273
Query: 181 YACSHCGLKEKGMEFFDLMVK-----KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM 235
C+ G E ++K + L YT +CG +D A + R +
Sbjct: 274 QVCTELAQLNLGRELHAALLKSGSEVNIQCNALLVMYT-------KCGRVDSALRVFREI 326
Query: 236 PVKANAIIWKTLLS 249
K + I W ++LS
Sbjct: 327 DEK-DYISWNSMLS 339
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 119/251 (47%), Gaps = 25/251 (9%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L MY K G + +V R + ++ I+W ++++ QNGL + ++ + M GF+
Sbjct: 304 NALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQ 363
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
PD VS+ S+ L L G+++HA +K D V ++L+ MY +C ++ S
Sbjct: 364 PDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHV 423
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS----- 184
F D + W+++I Y + EA+ +F + +++ + + + S+L ACS
Sbjct: 424 FDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLETI 483
Query: 185 ------HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
HC G+ DL+VK ++D+ G CG + + + + K
Sbjct: 484 LLAKQLHCYAIRNGL--LDLVVKNR-----------IIDIYGECGEVYHSLKMFETVEQK 530
Query: 239 ANAIIWKTLLS 249
+ + W ++++
Sbjct: 531 -DIVTWTSMIN 540
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 81/194 (41%), Gaps = 14/194 (7%)
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGA-SLDVGVISS-LISMYSRCGCLD 124
G P + + V+ + + QG Q+HA V G+ D G +++ L+ MY +CG +
Sbjct: 53 GRSPPQEHYGWVLDLVAAKKAVAQGVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVA 112
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQME---QKEFEANDVTFVSLLY 181
D+ F V W+++I AY G EA+ ++ M + T S+L
Sbjct: 113 DARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLK 172
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLL----GRCGYLDEAAALIRNMPV 237
A G G E L VK L+ T V + L +CG LD A + M
Sbjct: 173 ASGVEGDGRCGCEVHGLAVKH-----GLDRSTFVANALIAMYAKCGILDSAMRVFELMHD 227
Query: 238 KANAIIWKTLLSAC 251
+ W +++S C
Sbjct: 228 GRDVASWNSMISGC 241
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 45/91 (49%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F ++ SSL MY GSL KV + ++++ W +I +G + +D +
Sbjct: 598 FHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCKDMVLWTAMINATGMHGHGKQAIDLFK 657
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQ 92
M G PD ++F++++ +CS + +G+
Sbjct: 658 RMLQTGVTPDHVSFLALLYACSHSKLVNEGK 688
>gi|356568841|ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 170/446 (38%), Positives = 268/446 (60%), Gaps = 16/446 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+E ++ ++L +Y K GS+ V MP +N ++W +IA A+N + L+ +
Sbjct: 213 GYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELF 272
Query: 61 NLMRMVGFR--PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
LM + P+ +T V+V+ +C+ LA L QG+ IH +++ G + V+++LI+MY
Sbjct: 273 QLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVLNALITMYG 332
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
RCG + + F + DVV W+S+I+ YG HG G++AI +FE M + + ++F++
Sbjct: 333 RCGEILMGQRVFDNMKNRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPSYISFIT 392
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+L ACSH GL E+G F+ M+ KYR P +EHY C+VDLLGR LDEA LI +M +
Sbjct: 393 VLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMHFE 452
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
+W +LL +C+ H + ++A R + + + P++A YVLL++I+A AK W
Sbjct: 453 PGPTVWGSLLGSCRIHCNVELAERASTLLFELEPRNAGNYVLLADIYAEAKMWSEAKSVM 512
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
+ + R ++K PG SW+E+K +V+ F D+ +P+ EI L +L++EMK +GYVP T
Sbjct: 513 KLLEARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQIEEIHALLVKLSNEMKAQGYVPQTN 572
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIK 404
++D+D EEKE + HSEKLA+AF +G + + K+IS+
Sbjct: 573 VVLYDLDEEEKERIVLGHSEKLAVAFGLINTVKGETIRIRKNLRLCEDCHAVTKFISKFA 632
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
NREI+VRD +RFHHF++G CSCGDYW
Sbjct: 633 NREILVRDVNRFHHFKDGVCSCGDYW 658
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 136/280 (48%), Gaps = 10/280 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ D + L +MY + GS+ KV R + W L A G +++LD Y
Sbjct: 108 GFDQDPFLATKLINMYYELGSIDRARKVFDETRERTIYVWNALFRALAMVGCGKELLDLY 167
Query: 61 NLMRMVGFRPDKITFVSVISSC--SELAT--LGQGQQIHAEVVKAGASLDVGVISSLISM 116
M +G D+ T+ V+ +C SEL+ L +G++IHA +++ G ++ V+++L+ +
Sbjct: 168 VQMNWIGIPSDRFTYTFVLKACVVSELSVSPLQKGKEIHAHILRHGYEANIHVMTTLLDV 227
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM--EQKEFEANDV 174
Y++ G + + F + V WS+MIA + + +A+ LF+ M E + N V
Sbjct: 228 YAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMLEAHDSVPNSV 287
Query: 175 TFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRN 234
T V++L AC+ E+G ++++ L ++ + GRCG + + N
Sbjct: 288 TMVNVLQACAGLAALEQGKLIHGYILRR-GLDSILPVLNALITMYGRCGEILMGQRVFDN 346
Query: 235 MPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNP 272
M + + + W +L+S H A +I E ++ G +P
Sbjct: 347 MKNR-DVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSP 385
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 99/212 (46%), Gaps = 7/212 (3%)
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P + TF +I SC++ +L G +H +V +G D + + LI+MY G +D + K
Sbjct: 76 PTQRTFEHLICSCAQQNSLSDGLDVHRRLVSSGFDQDPFLATKLINMYYELGSIDRARKV 135
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F E + +W+++ A G G+E ++L+ QM ++ T+ +L AC L
Sbjct: 136 FDETRERTIYVWNALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVSELS 195
Query: 190 ----EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
+KG E ++ ++ + + T ++D+ + G + A ++ MP K N + W
Sbjct: 196 VSPLQKGKEIHAHIL-RHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTK-NFVSWS 253
Query: 246 TLLSACKTHKSTDMAGRIAEEILGVNPQDAAP 277
++ AC M +++ + D+ P
Sbjct: 254 AMI-ACFAKNEMPMKALELFQLMMLEAHDSVP 284
>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 821
Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 175/444 (39%), Positives = 265/444 (59%), Gaps = 15/444 (3%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
E LV +++ MY K G++ + V M +NVI W ++ G +QNG AED L +
Sbjct: 378 LESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFC 437
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M+ + +T VS++ C+ L +L +G+ +HA ++ G + D + S+LI MY++CG
Sbjct: 438 QMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCG 497
Query: 122 CLDDSVKTFL-ECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
+ + K F E DV+L +SMI YG HG G A+ ++ +M ++ + N TFVSLL
Sbjct: 498 KIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLL 557
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL E+G F M + + +P+ +HY C+VDL R G L+EA L++ MP + +
Sbjct: 558 TACSHSGLVEEGKALFHSMERDHDVRPQHKHYACLVDLHSRAGRLEEADELVKQMPFQPS 617
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+ + LLS C+THK+T+M +IA+ ++ ++ ++ YV+LSNI+A A++W+ V+ R
Sbjct: 618 TDVLEALLSGCRTHKNTNMGIQIADRLISLDYLNSGIYVMLSNIYAEARKWESVNYIRGL 677
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
MR + +KK PG S +E+ N+V+ F D SHP +I LE L E++ GY+PDT
Sbjct: 678 MRMQGMKKIPGYSLIEVGNKVYTFFASDDSHPSWADIYQLLENLRLEVEAEGYIPDTSCV 737
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA----------EHTRGLIVMLP----FKYISEIKNR 406
+ D++ K L HSE+LAIAF + T+ L V + KYIS+I R
Sbjct: 738 LRDVNEPMKVKLLWGHSERLAIAFGLLSTPCGSLIKITKNLRVCVDCHNVTKYISKIVQR 797
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EIIVRDA+RFHHF NGKCSC D+W
Sbjct: 798 EIIVRDANRFHHFVNGKCSCNDFW 821
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 119/248 (47%), Gaps = 2/248 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF L L GSS+ + +K G L + +KV MP ++V+ W ++I G Q GL + + +
Sbjct: 175 GFHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMF 234
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G RP +T +++ +C + G H+ V+ G DV V++SL+ MYS
Sbjct: 235 LEMIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNL 294
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + F ++ W++MI+ Y +G E+ LF ++ Q + T VSL+
Sbjct: 295 GDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLI 354
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
CS E G +++K + L T +VD+ +CG + +A + M K N
Sbjct: 355 RGCSQTSDLENGRILHSCIIRK-ELESHLVLSTAIVDMYSKCGAIKQATIVFGRMG-KKN 412
Query: 241 AIIWKTLL 248
I W +L
Sbjct: 413 VITWTAML 420
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 144/314 (45%), Gaps = 9/314 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D+ +SL MY G V M R++I+W +I+G QNG+ + +
Sbjct: 276 GMGNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALF 335
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ G D T VS+I CS+ + L G+ +H+ +++ + + ++++ MYS+C
Sbjct: 336 RRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKC 395
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + F +V+ W++M+ +G E+A+ LF QM++++ AN VT VSL+
Sbjct: 396 GAIKQATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLV 455
Query: 181 YACSHCGLKEKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
+ C+H G KG ++ Y + + ++D+ +CG + A L N
Sbjct: 456 HCCAHLGSLTKGRTVHAHFIRHGYAFDAVIT--SALIDMYAKCGKIHSAEKLFNNEFHLK 513
Query: 240 NAIIWKTLLSACKTHKSTDMA----GRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVS 295
+ I+ +++ H A R+ EE L P LL+ S +G +
Sbjct: 514 DVILCNSMIMGYGMHGHGRYALGVYSRMIEERL--KPNQTTFVSLLTACSHSGLVEEGKA 571
Query: 296 EFREAMRERNVKKE 309
F R+ +V+ +
Sbjct: 572 LFHSMERDHDVRPQ 585
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 80/185 (43%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
+ L +Y G L V + +IAG +N +V + +M
Sbjct: 82 AAKLIRVYSDLGFLGHARNVFDQCSLPETAVCNAMIAGFLRNQQHMEVPRLFRMMGSCDI 141
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
+ T + + +C++L G +I V+ G L + V SS+++ + G L D+ K
Sbjct: 142 EINSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVGSSMVNFLVKRGYLADAQK 201
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F DVV W+S+I Y G E+I +F +M + VT +LL AC GL
Sbjct: 202 VFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSGL 261
Query: 189 KEKGM 193
K+ GM
Sbjct: 262 KKVGM 266
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 6/164 (3%)
Query: 87 TLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIA 146
TL + IHA+++K S + + + LI +YS G L + F +C + + ++MIA
Sbjct: 59 TLIHVKSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCSLPETAVCNAMIA 118
Query: 147 AYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRK 206
+ + + E LF M + E N T + L AC+ E GME V RR
Sbjct: 119 GFLRNQQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAV---RRG 175
Query: 207 PRLEHY--TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
L Y + +V+ L + GYL +A + MP K + + W +++
Sbjct: 176 FHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEK-DVVCWNSII 218
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 168/447 (37%), Positives = 259/447 (57%), Gaps = 24/447 (5%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E LV+ +++ Y K G L + M R+ + W +I G QNG+ + L +
Sbjct: 134 EKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRR 193
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M +P+++T +SV+S+C +L L G+ +H+ + G +V V ++L+ MYS+CG
Sbjct: 194 MLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGS 253
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
L+D+ F + + DVV W+SMI Y G +EA+ LF+ M + ++TF+ +L A
Sbjct: 254 LEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSA 313
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
C H G +G + F+ M +Y +P++EHY C+V+LLGR G++++A L++NM ++ + +
Sbjct: 314 CGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPV 373
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMR 302
+W TLL AC+ H + +I E ++ N ++ Y+LLSNI+A+ W GV+ R M+
Sbjct: 374 LWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMK 433
Query: 303 ERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMH 362
+ VKKEPG S +E+ N+VH+F G +HP+ EI + LEE+ +K GY P T +H
Sbjct: 434 DSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVLH 493
Query: 363 DMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEI 403
D+ EKE +L+ HSEKLAIAF GLI P K IS+I
Sbjct: 494 DIGETEKERSLEVHSEKLAIAF-----GLINTQPGTTIKIVKNLRVCADCHEVTKLISKI 548
Query: 404 KNREIIVRDASRFHHFRNGKCSCGDYW 430
R+I+VRD +RFHHF NG CSCGDYW
Sbjct: 549 TGRKIVVRDRNRFHHFVNGSCSCGDYW 575
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 109/244 (44%), Gaps = 37/244 (15%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
+V W +I G A GL E L+ Y M G P+ TF S++ C + G+ +H
Sbjct: 39 SVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLCP----IEPGKALH 94
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTF--------------LEC-------- 133
++ VK G D+ V + L+ +Y+R G + + + F L C
Sbjct: 95 SQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELD 154
Query: 134 ---------EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
E D V W+ MI Y +G EA+ LF +M + + + N+VT +S+L AC
Sbjct: 155 AARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACG 214
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
G E G + ++ + + T +VD+ +CG L++A + + K + + W
Sbjct: 215 QLGALESG-RWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDK-DVVAW 272
Query: 245 KTLL 248
+++
Sbjct: 273 NSMI 276
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 91/187 (48%), Gaps = 7/187 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + ++ G++L MY K GSL + V + ++V+AW ++I G A G +++ L +
Sbjct: 233 GIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLF 292
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVV-KAGASLDVGVISSLISMYSR 119
M +G P ITF+ ++S+C + +G I ++ + G + ++++ R
Sbjct: 293 KSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGR 352
Query: 120 CGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGK---GEEAINLFEQMEQKEFEANDVT 175
G ++ + + D VLW +++ A HGK GE+ + L ++Q +
Sbjct: 353 AGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELL--VDQNLANSGTYI 410
Query: 176 FVSLLYA 182
+S +YA
Sbjct: 411 LLSNIYA 417
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 60/144 (41%), Gaps = 6/144 (4%)
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
Y+ G LD SV F + V W+++I + G E+A+N + QM + E N TF
Sbjct: 19 YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTF 78
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
S+L C E G V K L T ++D+ R G + A L MP
Sbjct: 79 SSILKLCP----IEPGKALHSQAV-KLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMP 133
Query: 237 VKANAIIWKTLLSACKTHKSTDMA 260
K+ + +L+ H D A
Sbjct: 134 EKS-LVSLTAMLTCYAKHGELDAA 156
>gi|357128440|ref|XP_003565881.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Brachypodium distachyon]
Length = 682
Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 169/443 (38%), Positives = 264/443 (59%), Gaps = 14/443 (3%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
E ++ GS+L MY K + ++P +NV++W ++ QN ED L +
Sbjct: 240 LEQNVYVGSALVDMYGKCDCARDAHSAFEVLPEKNVVSWTAVMTAYTQNERFEDALQLFL 299
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
+ + G RP++ T+ ++SC+ LA L G + A +K G + V ++L++MYS+ G
Sbjct: 300 DLEIEGVRPNEFTYAVALNSCAGLAALKNGNALSASAMKTGHWGALSVCNALMNMYSKSG 359
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+ D+ + FL + DVV W+S+I Y HG EA+ +F M E + VTFV +L
Sbjct: 360 SIHDAWRVFLSMPWRDVVSWNSVIIGYAHHGLAREAMCVFHDMLLAEIVPSYVTFVGVLL 419
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
AC+ GL ++G+ + ++M+K+ KP EHYTC+V LL R G LDEA I + + +
Sbjct: 420 ACAQLGLVDEGLYYLNIMMKEMGIKPGREHYTCMVGLLCRAGRLDEAEQFILSNCIGTDV 479
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
+ WK+LLS+C+ +K+ + R+AE+IL + P D YVLLSN++A A RW GV + R+ M
Sbjct: 480 VAWKSLLSSCQVYKNYGLGHRVAEQILQLKPNDVGTYVLLSNMYAKANRWDGVVKVRKLM 539
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
RER V+KEPGVSW+++ ++VH FT DK+H +I + L+EL ++K+ GYVP+ +
Sbjct: 540 RERGVRKEPGVSWIQVGSEVHVFTSEDKNHKWINQITIKLKELIGQIKVIGYVPNCAVVL 599
Query: 362 HDMDSEEKEYNLKHHSEKLAIAF-------AEHTRGLIVM-------LPFKYISEIKNRE 407
HD+++E+KE +L +HSEK+A+AF E R + + + K IS + R+
Sbjct: 600 HDVEAEQKEEHLMYHSEKMALAFGLIHSPEGETIRIMKNLRICDDCHVAIKLISVVTRRK 659
Query: 408 IIVRDASRFHHFRNGKCSCGDYW 430
I+VRD RFH +G CSC DYW
Sbjct: 660 IVVRDTVRFHCIDDGVCSCDDYW 682
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 142/303 (46%), Gaps = 11/303 (3%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
D++ + L Y K G L ++ MP RN ++ L++G A G D L L+
Sbjct: 43 FDVIQHNHLIAFYGKCGRLGLARQMFDAMPSRNAVSGNLLMSGYASAGRHSDAL---ALL 99
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
+ F ++ + +S+ + + + G G+Q H VK+G V ++++ MY +C +
Sbjct: 100 KAADFSLNEYVLSTALSAAAHVRSYGMGRQCHGYAVKSGLQEHPYVCNAVLHMYCQCAHV 159
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
+D+VK F D+ ++SMI + G+ + +I + M + + + V++V++L
Sbjct: 160 EDAVKVFENVSGFDIFAFNSMINGFLDLGEFDGSIRIVRSMVGEVEQWDHVSYVAVL--- 216
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHY--TCVVDLLGRCGYLDEAAALIRNMPVKANA 241
HC ++ + + + +R+ Y + +VD+ G+C +A + +P K N
Sbjct: 217 GHCASTKELLLGCQVHAQALKRRLEQNVYVGSALVDMYGKCDCARDAHSAFEVLPEK-NV 275
Query: 242 IIWKTLLSACKTHKSTDMAGR--IAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
+ W +++A ++ + A + + EI GV P + V L++ A G +
Sbjct: 276 VSWTAVMTAYTQNERFEDALQLFLDLEIEGVRPNEFTYAVALNSCAGLAALKNGNALSAS 335
Query: 300 AMR 302
AM+
Sbjct: 336 AMK 338
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 112/239 (46%), Gaps = 2/239 (0%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+++ HMY + + + KV + ++ A+ ++I G G + + M +
Sbjct: 147 NAVLHMYCQCAHVEDAVKVFENVSGFDIFAFNSMINGFLDLGEFDGSIRIVRSMVGEVEQ 206
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
D +++V+V+ C+ L G Q+HA+ +K +V V S+L+ MY +C C D+
Sbjct: 207 WDHVSYVAVLGHCASTKELLLGCQVHAQALKRRLEQNVYVGSALVDMYGKCDCARDAHSA 266
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F +VV W++++ AY + + E+A+ LF +E + N+ T+ L +C+
Sbjct: 267 FEVLPEKNVVSWTAVMTAYTQNERFEDALQLFLDLEIEGVRPNEFTYAVALNSCAGLAAL 326
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
+ G K L ++++ + G + +A + +MP + + + W +++
Sbjct: 327 KNG-NALSASAMKTGHWGALSVCNALMNMYSKSGSIHDAWRVFLSMPWR-DVVSWNSVI 383
>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 177/445 (39%), Positives = 258/445 (57%), Gaps = 15/445 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRL-MPIRNVIAWITLIAGKAQNGLAEDVLDQ 59
GFE D+ G++L MY K+G + V + RNV+++ LI G + E L
Sbjct: 237 GFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSV 296
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ +R G P++ TF S+I +C+ A L QG Q+HA+V+K D V S L+ MY +
Sbjct: 297 FVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGK 356
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG L+ +++ F E + W+S+++ +G HG G++AI FE+M + + N +TF+SL
Sbjct: 357 CGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISL 416
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L CSH GL E+G+++F M K Y P EHY+CV+DLLGR G L EA I MP +
Sbjct: 417 LTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEP 476
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
NA W + L AC+ H +M AE+++ + P+++ VLLSNI+A+ ++W+ V R
Sbjct: 477 NAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRM 536
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
MR+ NVKK PG SW+++ + H F D SH R I L+ L ++K GYVP T +
Sbjct: 537 RMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHXRKSAIYEKLDXLLDQIKAAGYVPXTDS 596
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFAEHT----------RGLIVML----PFKYISEIKN 405
DMD KE L HSE++A+AFA + + L V + K+IS++
Sbjct: 597 VPLDMDDXMKEKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTG 656
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
R+IIVRD SRFHHF +G CSCGDYW
Sbjct: 657 RKIIVRDNSRFHHFTDGSCSCGDYW 681
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 139/302 (46%), Gaps = 35/302 (11%)
Query: 12 LAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPD 71
L +MY K G L K+ MP RN+++W +I+G +QN + + + MR+ G P
Sbjct: 46 LVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPT 105
Query: 72 KITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFL 131
+ F S I +C+ L ++ G+Q+H +K G ++ V S+L MYS+CG + D+ K F
Sbjct: 106 QFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFE 165
Query: 132 ECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS------- 184
E D V W++MI Y G+ EEA+ F++M +E + S L AC
Sbjct: 166 EMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKF 225
Query: 185 ----HCGLKEKGME----FFDLMVKKYRRKPRLE----------------HYTCVVDLLG 220
H + + G E + + Y + +E YTC++D
Sbjct: 226 GRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYV 285
Query: 221 RCGYLDEAAAL---IRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAP 277
+++ ++ +R ++ N + +L+ AC + + ++ +++ +N D P
Sbjct: 286 ETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKIN-FDEDP 344
Query: 278 YV 279
+V
Sbjct: 345 FV 346
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 145/301 (48%), Gaps = 7/301 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +L GS+L MY K G++ + KV MP ++ ++W +I G ++ G E+ L +
Sbjct: 136 GIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAF 195
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M D+ S + +C L G+ +H+ VVK G D+ V ++L MYS+
Sbjct: 196 KKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKA 255
Query: 121 GCLDDSVKTF-LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G ++ + F ++ E +VV ++ +I Y + E+ +++F ++ ++ E N+ TF SL
Sbjct: 256 GDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSL 315
Query: 180 LYACSHCGLKEKGMEFFDLMVK-KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+ AC++ E+G + ++K + P + + +VD+ G+CG L+ A +
Sbjct: 316 IKACANQAALEQGTQLHAQVMKINFDEDPFVS--SILVDMYGKCGLLEHAIQAFDEIG-D 372
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSE 296
I W +L+S H A + E ++ GV P LL+ + +G+
Sbjct: 373 PTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDY 432
Query: 297 F 297
F
Sbjct: 433 F 433
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 86/178 (48%), Gaps = 2/178 (1%)
Query: 71 DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTF 130
D VI + ++ L +G+Q+HA ++ AG + + + L++MYS+CG LD ++K F
Sbjct: 4 DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63
Query: 131 LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKE 190
++V W++MI+ + K EAI F M F S + AC+ G E
Sbjct: 64 DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIE 123
Query: 191 KGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
G + L + K+ L + + D+ +CG + +A + MP K + + W ++
Sbjct: 124 MGKQMHCLAL-KFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCK-DEVSWTAMI 179
>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 830
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 170/449 (37%), Positives = 264/449 (58%), Gaps = 25/449 (5%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
+E G++L Y K S E + +++ ++V++W ++ AQ G + +
Sbjct: 387 YECTPTVGTALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFI 446
Query: 62 LMRMVGFRPDKITFVSVISSC-SELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M M G +P++ T S I +C S A + G+Q HA +K + V S+L+SMY+R
Sbjct: 447 KMTMHGLKPNEFTISSAIDACASPAAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARK 506
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++++ F D++ W+SM++ Y HG ++A+++F QME + + + +TF+S++
Sbjct: 507 GSIENAQCVFERQTDRDLLSWNSMLSGYAQHGYSQKALDVFRQMEVEGIDMDGLTFLSVI 566
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
C+H GL E+G ++FDLMV+ Y P ++HY C+VDL R G LDE +LI MP A
Sbjct: 567 MGCAHAGLVEEGQQYFDLMVRDYGITPTMDHYACMVDLYSRAGKLDETMSLIEGMPFPAG 626
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
IW+ LL AC+ HK+ ++ AE++L + P D+A YVLLSNI+++A +W+ E R+
Sbjct: 627 PTIWRALLGACRVHKNVELGKLAAEKLLSLEPLDSATYVLLSNIYSAAGKWKEKDEVRKL 686
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M + V+KE G SW++IKN+VH F DKSHP S +I L +T+++K GY PDT
Sbjct: 687 MDTKKVRKEAGCSWIQIKNKVHFFIASDKSHPLSEQIYAKLRAMTAKLKQEGYCPDTSFV 746
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
HD+ ++KE L HSE+LA+AF GLI P K +S
Sbjct: 747 PHDVAEDQKEAMLAMHSERLALAF-----GLIATPPAAPLHIFKNLRVSGDGHTVMKMVS 801
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
EI++REI++RD RFHHF++G CSCGD+W
Sbjct: 802 EIEDREIVMRDCCRFHHFKSGVCSCGDFW 830
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 140/290 (48%), Gaps = 13/290 (4%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ G+SL MYM S+++G KV M RNV+ W +L+ G Q G+ DV+ + MR
Sbjct: 90 DIRVGTSLVDMYMNWHSVLDGRKVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMR 149
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G P+ TF SV+S + + GQ +HA+ +K G V V +SL++MY++CG ++
Sbjct: 150 AEGVWPNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVE 209
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
++ F E D+V W++++A +G+ EA+ LF + T+ +++ C+
Sbjct: 210 EARVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCA 269
Query: 185 ---HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
H GL + V K+ T ++D + G LD+A + M N
Sbjct: 270 NLKHLGLARQ----LHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNV 325
Query: 242 IIWKTLLSACKTHKSTDMAG----RIAEEILGVNPQDAAPYVLLSNIHAS 287
+ W ++ C + +A R+ E+ GV P D +L+ AS
Sbjct: 326 VSWTAMIDGCIQNGDIPLAAALFSRMRED--GVAPNDLTYSTILTVSEAS 373
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 115/247 (46%), Gaps = 8/247 (3%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMP-IRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
++L Y K+G L + V LM +NV++W +I G QNG ++ MR G
Sbjct: 297 TALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGV 356
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
P+ +T+ ++++ ++ QIHA+V+K V ++L+ YS+ ++++
Sbjct: 357 APNDLTYSTILT----VSEASFPPQIHAQVIKTNYECTPTVGTALMVSYSKLCSTEEALS 412
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC-SHCG 187
F + DVV WS+M+ Y G A N F +M + N+ T S + AC S
Sbjct: 413 IFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAIDACASPAA 472
Query: 188 LKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTL 247
+ G +F + + K+R L + +V + R G ++ A + + + + W ++
Sbjct: 473 GVDLGRQFHAISI-KHRCHDALCVSSALVSMYARKGSIENAQCVFERQTDR-DLLSWNSM 530
Query: 248 LSACKTH 254
LS H
Sbjct: 531 LSGYAQH 537
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 99/236 (41%), Gaps = 7/236 (2%)
Query: 17 MKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY-NLMRMVGFRPDKITF 75
+ S +L+ K P R W T+ G LD + + R G
Sbjct: 2 LTSMTLLAPAKRSTKFPTRT--PW-TMPFSTTWQGFVHQALDHFLDAHRRQGRCVGGGAL 58
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASL-DVGVISSLISMYSRCGCLDDSVKTFLECE 134
+ +I C + G+Q+HA V+ G D+ V +SL+ MY + D K F
Sbjct: 59 LGIIKICGSVPDRVLGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGML 118
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGME 194
+VV W+S++ Y G + ++LF +M + N TF S+L + G+ + G
Sbjct: 119 KRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQH 178
Query: 195 FFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+ K+ + ++++ +CG ++EA + M + + + W TL++
Sbjct: 179 VHAQSI-KFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETR-DMVSWNTLMAG 232
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 169/445 (37%), Positives = 261/445 (58%), Gaps = 25/445 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ +SL MY K + + + R ++W +I G AQNG + L+ ++ M+
Sbjct: 383 DISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMK 442
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+G +PD T VSVI + +EL+ + IH ++++ ++ V ++L+ MYS+CG +
Sbjct: 443 SLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIH 502
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ K F V+ W++MI YG HG G A++LF++M++ E ND+T++S++ ACS
Sbjct: 503 MARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACS 562
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL ++G+ F M + Y +P ++HY +VDLLGR G + EA I NMP+ ++
Sbjct: 563 HSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVY 622
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
+L ACK HK+ ++ + A+++ +NP + +VLL+NI+AS +W V+E R+ M ++
Sbjct: 623 GAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKK 682
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
+KK PG S +E++N+VH F G +HP+S I +LEEL E+K GYVPDT + D+
Sbjct: 683 GLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIKAAGYVPDTNLIL-DV 741
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKN 405
+ + +E L HSEKLAIAF GL+ P KYIS +
Sbjct: 742 EDDVQEQLLNSHSEKLAIAF-----GLLNTSPGTTIHVRKNLRVCGDCHNATKYISLVTG 796
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
REIIVRD RFHHF+NG CSCGDYW
Sbjct: 797 REIIVRDMQRFHHFKNGICSCGDYW 821
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 135/247 (54%), Gaps = 2/247 (0%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F ++ A + + +MY K + + K+ MP R++++W T+IAG +QNG A+ L+
Sbjct: 178 FAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVL 237
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M+ G RPD IT V+V+ + +++ L G+ IH ++AG + V + ++L MYS+CG
Sbjct: 238 RMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCG 297
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
++ + F + VV W+SM+ Y +G+ E+AI +FE+M ++ + VT + L+
Sbjct: 298 SVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALH 357
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
AC+ G E+G +F V + + ++ + +C +D A+ + N+ + +
Sbjct: 358 ACADLGDLERG-KFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTH- 415
Query: 242 IIWKTLL 248
+ W ++
Sbjct: 416 VSWNAMI 422
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 139/304 (45%), Gaps = 12/304 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF + ++LA MY K GS+ + M + V++W +++ G QNG E + +
Sbjct: 278 GFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVF 337
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G P +T + + +C++L L +G+ +H V + D+ V++SLISMYS+C
Sbjct: 338 EKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKC 397
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
+D + F V W++MI Y +G+ EA+N F +M+ + + T VS++
Sbjct: 398 KRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVI 457
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
A + + L+++ K + T +VD+ +CG + A L +M +
Sbjct: 458 PALAELSVTRHAKWIHGLIIRSCLDK-NIFVTTALVDMYSKCGAIHMARKLF-DMISDRH 515
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEIL------GVNPQDAAPYVLLSNIHASAKRWQGV 294
I W ++ TH GR A ++ V P D ++S S +G+
Sbjct: 516 VITWNAMIDGYGTHG----LGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGL 571
Query: 295 SEFR 298
F+
Sbjct: 572 RHFK 575
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 135/281 (48%), Gaps = 7/281 (2%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+ L ++ K GS+ E +V + + + T++ G A+N E L MR +
Sbjct: 85 TKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVK 144
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P F ++ C + A L +G++IH +++ + +V ++ +++MY++C +DD+ K
Sbjct: 145 PVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKM 204
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F D+V W+++IA + +G ++A+ L +M+ + + +T V++L A + GL
Sbjct: 205 FDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLL 264
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
G ++ K + T + D+ +CG ++ A + M K + W +++
Sbjct: 265 MVGKSIHGYAIRAGFAK-LVNISTALADMYSKCGSVETARLIFDGMDQK-TVVSWNSMMD 322
Query: 250 ACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASA 288
+ + A + E++L G++P ++ +HA A
Sbjct: 323 GYVQNGEPEKAIAVFEKMLEEGIDPTGV---TIMEALHACA 360
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/169 (20%), Positives = 74/169 (43%), Gaps = 5/169 (2%)
Query: 82 CSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLW 141
C+ + L QI V+K G + + L+S++S+ G ++++ + F + L+
Sbjct: 59 CTSMKEL---HQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALY 115
Query: 142 SSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVK 201
+M+ Y + E A+ +M + + F LL C ++G E ++
Sbjct: 116 HTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLIT 175
Query: 202 KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+ T VV++ +C +D+A + MP + + + W T+++
Sbjct: 176 N-SFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPER-DLVSWNTIIAG 222
>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
Length = 935
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 173/449 (38%), Positives = 266/449 (59%), Gaps = 20/449 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVI-RLMPIR-NVIAWITLIAGKAQNGLAEDVLD 58
G E D ++ +MY K GSL + V R+ P R + I W +++A +GL ++ +
Sbjct: 488 GLEGDTAVANATLNMYAKCGSLADARAVFERISPARRDCITWNSMLAAYGHHGLGKEAFE 547
Query: 59 QYNLMRMVGF-RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMY 117
+ M +P+K+TFV+V+ + + ++ QG++IHA VV G D + ++L++MY
Sbjct: 548 LFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMY 607
Query: 118 SRCGCLDDSVKTFLECEYS--DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVT 175
++CG LDD+ F + + DV+ W+S+IA Y +G+ E A+ LF M+Q+ N VT
Sbjct: 608 AKCGSLDDAQAIFDKSSSNQEDVIAWTSLIAGYAQYGQAERALKLFWTMQQQGVRPNHVT 667
Query: 176 FVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM 235
F+S L AC+H G E+G E M + P +H++C+VDLLGRCG LDEA L+
Sbjct: 668 FISALTACNHGGKLEQGCELLSGMTPDHGILPASKHFSCIVDLLGRCGRLDEAEKLLERT 727
Query: 236 PVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVS 295
+A+ I W LL ACK K + R AE I+ ++P+ A+ Y++L++++A+A RW +
Sbjct: 728 S-QADVITWMALLDACKNSKELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAA 786
Query: 296 EFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVP 355
R+ M ++ ++ +PG S +E+ ++H F+ GDKSHP+S EI L LE L +K GYV
Sbjct: 787 TIRKTMLDKGIRADPGCSAVEVNQELHSFSAGDKSHPKSEEIYLELERLHWSIKAAGYVA 846
Query: 356 DTGADMHDMDSEEKEYNLKHHSEKLAIAFAEHT----------RGLIVM----LPFKYIS 401
DTG +HD+ E KE L HSEKLAIAF + + L V K IS
Sbjct: 847 DTGLVLHDVSQEHKERLLMRHSEKLAIAFGLMSTPSGSPLRVIKNLRVCSDCHTATKLIS 906
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
++ R+I++RD+SR+HHF +G CSCGDYW
Sbjct: 907 KVTGRDILMRDSSRYHHFTSGTCSCGDYW 935
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 106/193 (54%), Gaps = 10/193 (5%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMP---IRNVIAWITLIAGKAQNGLAEDVLD 58
FE + V G++L MY K GSL++ ++ +P R+V+ W +I+ +NG A + L
Sbjct: 172 FEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQ 231
Query: 59 QYNLMRMVGFRP-DKITFVSVISSCSE--LATLGQGQQIHAEVVKAGASLDVGVISSLIS 115
+ M G P + +TFVSV+ SC E L +L + IH +V AG + V ++L+
Sbjct: 232 LFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVD 291
Query: 116 MYSRCGCLDDSVKTFL----ECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEA 171
Y + G LDD+ + FL E + +V S+MI+A +G +E++ LF M + +
Sbjct: 292 SYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNGWPQESLRLFFAMNLEGTKP 351
Query: 172 NDVTFVSLLYACS 184
+ VT VS+L ACS
Sbjct: 352 SGVTLVSVLNACS 364
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 126/264 (47%), Gaps = 12/264 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLM----PIRNVIAWITLIAGKAQNGLAEDV 56
G E + ++L Y K GSL + +V P +++ +I+ QNG ++
Sbjct: 278 GIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNGWPQES 337
Query: 57 LDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLIS 115
L + M + G +P +T VSV+++CS L + + ++ A+ D + ++L++
Sbjct: 338 LRLFFAMNLEGTKPSGVTLVSVLNACSMLQVGSATAFVLEQAMEVVSATRDNVLGTTLLT 397
Query: 116 MYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVT 175
Y+R L + TF + DVV W++M AAY H + EA+ LFE+M + + T
Sbjct: 398 TYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERMLLEGVRPSVAT 457
Query: 176 FVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV----VDLLGRCGYLDEAAAL 231
F++ L AC+ + ++ + LE T V +++ +CG L +A A+
Sbjct: 458 FITALTACA--AYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAV 515
Query: 232 I-RNMPVKANAIIWKTLLSACKTH 254
R P + + I W ++L+A H
Sbjct: 516 FERISPARRDCITWNSMLAAYGHH 539
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 116/231 (50%), Gaps = 22/231 (9%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
S L M+ K G+L E E + +V + +I ++G + ++ ++ M +
Sbjct: 83 ASDLIVMHAKCGNLAEAEALADRFA--SVYSCTAMIRAWMEHGRPDKAMELFDRMEV--- 137
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
RP+ ++++++CS L L G++IH+++ + + ++LISMYS+CG L D+ +
Sbjct: 138 RPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQ 197
Query: 129 TF---LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQK-EFEANDVTFVSLLYACS 184
F DVV W++MI+A+ +G EA+ LF M++ N VTFVS+L +C
Sbjct: 198 AFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCV 257
Query: 185 HCGLKEKGMEFFDLMVKKYR-------RKPRLEHYTCVVDLLGRCGYLDEA 228
GL + D+ R R+ + T +VD G+ G LD+A
Sbjct: 258 EAGL----LSLEDVRAIHGRIVGAGIEREAFVR--TALVDSYGKLGSLDDA 302
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 89/182 (48%), Gaps = 12/182 (6%)
Query: 74 TFVSVISSCSELATLGQGQQIHAEVVKAGASL--DVGVISSLISMYSRCGCLDDSVKTFL 131
T+ ++ +C L L QGQ++HA ++ L + S LI M+++CG L ++ L
Sbjct: 45 TYGCLLQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHAKCGNLAEA--EAL 102
Query: 132 ECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEK 191
++ V ++MI A+ HG+ ++A+ LF++ME + N ++L+ ACS G
Sbjct: 103 ADRFASVYSCTAMIRAWMEHGRPDKAMELFDRMEVRP---NCHALIALVNACSCLGNLAA 159
Query: 192 GMEFFDLMV-KKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP--VKANAIIWKTLL 248
G + + + L + ++ + +CG L +A +P K + + W ++
Sbjct: 160 GRRIHSQISDRDFEENSVLGN--ALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMI 217
Query: 249 SA 250
SA
Sbjct: 218 SA 219
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 169/445 (37%), Positives = 265/445 (59%), Gaps = 27/445 (6%)
Query: 8 AGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVG 67
A SS+ Y + G + K+ M R+VI+W +I+G +Q G + L+ + M +G
Sbjct: 283 AWSSMVCGYARCGEINVARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALG 342
Query: 68 FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGA-SLDVGVISSLISMYSRCGCLDDS 126
+PD++T V+V+S+C+ L G++++ + ++ G + + + ++++ MY++CG +D +
Sbjct: 343 IKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSA 402
Query: 127 VKTFLEC--EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
++ F +++SMIA HG GE AI +F ++ + ++VTFV +L AC
Sbjct: 403 LEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACG 462
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL E+G + F+ M Y KP++EHY C+VDLLGR G L+EA L++ MP +AN++IW
Sbjct: 463 HSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIW 522
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
+ LLSAC+TH + + +++L + Q A YVLLSNI A A +W+ + R+ M +
Sbjct: 523 RALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLSNILADANQWEEARQVRKVMEDH 582
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
++K PG S++E+ +H+F DKSHP+ EI+L L+++ +K GYVP+T M D+
Sbjct: 583 GIRKPPGWSYIELGGAIHRFVASDKSHPQGKEIELMLKDMAMRLKSAGYVPNTAQVMFDI 642
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKN 405
D EEKE + +HSEKLA+AF GL+ P FK +SEI
Sbjct: 643 DEEEKESVVSYHSEKLALAF-----GLMYCSPTDTIRIVKNLRICADCHKAFKLVSEIYG 697
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
REI VRD RFHHFRNG CSC D+W
Sbjct: 698 REITVRDTMRFHHFRNGSCSCMDFW 722
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 148/311 (47%), Gaps = 37/311 (11%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE DL ++L H+Y G+L + +R+++++ T+I G A+ E L +
Sbjct: 141 GFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLF 200
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVI--SSLISMYS 118
M+ G PD+ TFV++ S CS L G+QIHA+V K S+D ++ S+++ MY+
Sbjct: 201 GEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYA 260
Query: 119 RCGCLDDSVKTF--------------LECEYS------------------DVVLWSSMIA 146
+CG ++ + + F + C Y+ DV+ W++MI+
Sbjct: 261 KCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVISWTAMIS 320
Query: 147 AYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRK 206
Y G+ EA+ LF++ME + ++VT V++L AC+ G + G + ++
Sbjct: 321 GYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFN 380
Query: 207 PRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK-ANAIIWKTLLSACKTHKSTDMAGRIAE 265
V+D+ +CG +D A + R + ++ ++++ H + A +
Sbjct: 381 QNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFR 440
Query: 266 EIL--GVNPQD 274
E++ G+ P +
Sbjct: 441 ELISTGLKPDE 451
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 106/215 (49%), Gaps = 2/215 (0%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRP-DKITFVSVISSCSELATLGQGQQI 94
N+ W T+I G +++ + + Y M G P + TF +++SC+ L++L G ++
Sbjct: 74 NLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEV 133
Query: 95 HAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKG 154
H+ ++K G D+ V ++LI +YS G L+ + F E D+V +++MI Y +
Sbjct: 134 HSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQP 193
Query: 155 EEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRR-KPRLEHYT 213
E A+ LF +M+ ++ TFV+L CS G + + K R + +
Sbjct: 194 ESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKS 253
Query: 214 CVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
+VD+ +CG ++ A + M +A W +++
Sbjct: 254 AIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMV 288
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 7/130 (5%)
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC---LDDSVKTFLE 132
+ ++ SC + QG QIHA+ + G + IS LIS +S G LD S F +
Sbjct: 13 LCLLESCK---SFKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQ 69
Query: 133 CEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEF-EANDVTFVSLLYACSHCGLKEK 191
+ ++ +W++MI Y EAI L+ M K N+ TF LL +C+ E
Sbjct: 70 IDCPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEP 129
Query: 192 GMEFFDLMVK 201
G E ++K
Sbjct: 130 GHEVHSHIIK 139
>gi|225463123|ref|XP_002265412.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Vitis vinifera]
Length = 573
Score = 334 bits (857), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 173/446 (38%), Positives = 273/446 (61%), Gaps = 18/446 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D++ G++L Y K G L ++V +P+R+V AW LIAG AQ + + L +
Sbjct: 130 GCHADILLGTTLIDAYAKCGDLDSAQRVFDEIPLRDVAAWNALIAGLAQGSKSSEALALF 189
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
N MR G + ++I+ + +++CS+L L G+ +HA V K ++V V +++I MY++C
Sbjct: 190 NRMRAEGEKINEISVLGALAACSQLGALRAGEGVHACVRKMDLDINVQVCNAVIDMYAKC 249
Query: 121 GCLDDSVKTF--LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
G D + F + C S VV W++MI A+ HG G A+ LFE+M + + E + VT+++
Sbjct: 250 GFADKGFRVFSTMTCGKS-VVTWNTMIMAFAMHGDGCRALELFEEMGKTQVEMDSVTYLA 308
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+L AC+H GL E+G+ FD MV + + ++HY VVDLLGR G L EA +I +MP+
Sbjct: 309 VLCACNHAGLVEEGVRLFDEMVGRGVNR-NVKHYGSVVDLLGRAGRLGEAYRIINSMPIV 367
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
+ ++W++LL ACKT+ + +MA + +++ + +VLLSN++A+ +RW+ V R
Sbjct: 368 PDVVLWQSLLGACKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARERWEDVGRVR 427
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
EAM+ R+V+K PG S++E++ +H+F GD+SHP EI L+E+ +K GYV +T
Sbjct: 428 EAMKSRDVRKVPGFSYIEVEGVIHKFVNGDQSHPDWREIYAKLDEIRFRIKAFGYVAETS 487
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVMLP------------FKYISEIK 404
+HD+ E+KE L HHSEKLA+AF + G + + K IS+I
Sbjct: 488 LVLHDIGEEDKENALCHHSEKLAVAFGLISTSEGTPIRVNKNLRICGDCHVVIKLISKIY 547
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
++EIIVRD +RFH F++G CSC DYW
Sbjct: 548 DQEIIVRDRARFHRFKDGSCSCRDYW 573
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 119/247 (48%), Gaps = 10/247 (4%)
Query: 68 FRPDKITF-VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
PD +TF S+I+S LA L + QIH+ +++ G D+ + ++LI Y++CG LD +
Sbjct: 96 LHPDALTFSFSLIASARALA-LSETSQIHSHLLRRGCHADILLGTTLIDAYAKCGDLDSA 154
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHC 186
+ F E DV W+++IA K EA+ LF +M + + N+++ + L ACS
Sbjct: 155 QRVFDEIPLRDVAAWNALIAGLAQGSKSSEALALFNRMRAEGEKINEISVLGALAACSQL 214
Query: 187 GLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKT 246
G G E V+K ++ V+D+ +CG+ D+ + M + + W T
Sbjct: 215 GALRAG-EGVHACVRKMDLDINVQVCNAVIDMYAKCGFADKGFRVFSTMTCGKSVVTWNT 273
Query: 247 LLSACKTHKSTDMAGRIAEEILGVNPQ-DAAPY--VLLSNIHASAKRWQGVSEFREAMR- 302
++ A H A + EE+ + D+ Y VL + HA +GV F E +
Sbjct: 274 MIMAFAMHGDGCRALELFEEMGKTQVEMDSVTYLAVLCACNHAGLVE-EGVRLFDEMVGR 332
Query: 303 --ERNVK 307
RNVK
Sbjct: 333 GVNRNVK 339
>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 334 bits (857), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 170/441 (38%), Positives = 263/441 (59%), Gaps = 15/441 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D V S++ Y + G + E +V ++++ W ++ G A+NG ED L +N M
Sbjct: 255 DQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEML 314
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+ PD T SV+SSC++LA+L GQ +H + + AG + ++ V S+LI MYS+CG +D
Sbjct: 315 LEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFID 374
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D+ F +VV W++MI +G ++A+ LFE M Q++F+ ++VTF+ +L AC
Sbjct: 375 DARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACL 434
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
HC E+G E+FD + ++ P L+HY C+V+LLGR G +++A ALI+NM + +IW
Sbjct: 435 HCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIW 494
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
TLLS C T A A + ++P A PY++LSN++AS RW+ V+ R M+ +
Sbjct: 495 STLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSK 554
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
NVKK G SW+EI N+VH+FT D++HP S +I L L +++ G+ P+T +HD+
Sbjct: 555 NVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQEEGFTPNTNLVLHDV 614
Query: 365 DSEEKEYNLKHHSEKLAIAFA--EHTRGL--IVMLP-----------FKYISEIKNREII 409
+EK ++ HSEKLA+AF + G+ I ++ K+ S I R+II
Sbjct: 615 GEDEKFKSICFHSEKLALAFGLIKKPNGISPIRIIKNIRICNDCHEFMKFASRIIGRQII 674
Query: 410 VRDASRFHHFRNGKCSCGDYW 430
+RD++RFHHF GKCSC D W
Sbjct: 675 LRDSNRFHHFSTGKCSCNDNW 695
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 141/329 (42%), Gaps = 66/329 (20%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D + ++L Y KSGS+ + MP R+ +++ T IAG + N ++ L+ + M+
Sbjct: 88 DXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQ 147
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
GF P + T VS++++ ++L L G+QIH ++ +V + ++L MY++CG ++
Sbjct: 148 REGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIE 207
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ F ++V W+ MI+ Y +G+ E+ I L QM + VT +++ A
Sbjct: 208 QARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYC 267
Query: 185 HCG-----------LKEKGMEFFDLMVKKYRRKPR------------LEH-----YT--- 213
CG KEK + + M+ Y + R LEH YT
Sbjct: 268 QCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSS 327
Query: 214 ----------------------------------CVVDLLGRCGYLDEAAALIRNMPVKA 239
++D+ +CG++D+A ++ MP +
Sbjct: 328 VVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTR- 386
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEIL 268
N + W ++ C + A + E +L
Sbjct: 387 NVVSWNAMIVGCAQNGHDKDALELFENML 415
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 80/148 (54%), Gaps = 2/148 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +L+ S+L MY K G + + V LMP RNV++W +I G AQNG +D L+ +
Sbjct: 352 GLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELF 411
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVV-KAGASLDVGVISSLISMYSR 119
M F+PD +TF+ ++S+C + QGQ+ + + G + + + ++++ R
Sbjct: 412 ENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGR 471
Query: 120 CGCLDDSVKTFLECEYS-DVVLWSSMIA 146
G ++ +V + D ++WS++++
Sbjct: 472 TGRIEQAVALIKNMAHDPDFLIWSTLLS 499
>gi|224079221|ref|XP_002305798.1| predicted protein [Populus trichocarpa]
gi|222848762|gb|EEE86309.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 334 bits (857), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 177/444 (39%), Positives = 266/444 (59%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D+ ++L Y K G L KV M R+V+ W ++I+G QNG A++ + +
Sbjct: 141 GFGSDVYVQTALMSFYGKCGVLCNARKVFDKMRDRSVVTWNSMISGYEQNGFAKEAIRLF 200
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M+ +G P+ TFVSV+S+C+ L G +H V G L+V + +SLI+MY+RC
Sbjct: 201 DRMKEIGVEPNSATFVSVLSACAHLGAFILGCWVHEYAVGNGLDLNVVLGTSLINMYTRC 260
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + + F + +VV W++MI+ YG +G G +A+ LF +M + N +TFV++L
Sbjct: 261 GNVSKAREVFDSMKERNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLLPNSITFVAVL 320
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+H GL +G F+ M ++YR P +EH+ C+VD+LGR G LDEA I+ + +
Sbjct: 321 SACAHAGLVNEGRRVFESMREEYRLVPEVEHHVCLVDMLGRAGLLDEAYNFIKEIHEEPA 380
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
IW +L ACK HK+ + ++AE L P + A YV+LSNI+A A R V R+
Sbjct: 381 PAIWTAMLGACKMHKNFGLGAQVAEHRLASEPGNPAHYVILSNIYALAGRMDQVEMVRDN 440
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M + +KK+ G S +++ + + F+MGDKSH + EI YL++L + + GYV + +
Sbjct: 441 MIRKCLKKQVGYSTIDLDRKTYLFSMGDKSHTETNEIYHYLDQLMRKCREAGYVTVSDSV 500
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNR 406
MH+++ EE+EY L +HSEKLAIAF + +RG ++ + KYIS I NR
Sbjct: 501 MHELEEEEREYALGYHSEKLAIAFGLLKTSRGTVIRIVKNLRMCEDCHSAIKYISVISNR 560
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EIIVRD RFHHF+NG CSC DYW
Sbjct: 561 EIIVRDKLRFHHFKNGSCSCLDYW 584
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 146/301 (48%), Gaps = 14/301 (4%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQ-NGLAEDVLDQYNLMRMVGF 68
+ L ++ +GS+ ++ ++P + + +LI ++ + + L Y M +
Sbjct: 48 TKLLNLACAAGSISYTRQIFLIVPNPDSFLFTSLIRSTSKFHNFSVYSLYFYTRMVLSNV 107
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
P TF SVI SC++L L G+ IH V+ G DV V ++L+S Y +CG L ++ K
Sbjct: 108 APSNYTFTSVIKSCADLVALRHGRIIHGHVLVNGFGSDVYVQTALMSFYGKCGVLCNARK 167
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F + VV W+SMI+ Y +G +EAI LF++M++ E N TFVS+L AC+H G
Sbjct: 168 VFDKMRDRSVVTWNSMISGYEQNGFAKEAIRLFDRMKEIGVEPNSATFVSVLSACAHLGA 227
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHY----TCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
G V +Y L+ T ++++ RCG + +A + +M + N + W
Sbjct: 228 FILG-----CWVHEYAVGNGLDLNVVLGTSLINMYTRCGNVSKAREVFDSMKER-NVVAW 281
Query: 245 KTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMR 302
++S T+ A + E+ G+ P +LS + +G F E+MR
Sbjct: 282 TAMISGYGTNGYGSQAVELFHEMRRNGLLPNSITFVAVLSACAHAGLVNEGRRVF-ESMR 340
Query: 303 E 303
E
Sbjct: 341 E 341
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 334 bits (857), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 177/439 (40%), Positives = 256/439 (58%), Gaps = 25/439 (5%)
Query: 11 SLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRP 70
SL Y K G + + M NVI W +I+G A+NG AE+ ++ ++ M +P
Sbjct: 295 SLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKP 354
Query: 71 DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTF 130
D +T S + + +++ +L Q + V K+ D+ V +SLI MY++CG ++ + + F
Sbjct: 355 DSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVF 414
Query: 131 LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKE 190
DVV+WS+MI YG HG+G EAINL+ M+Q NDVTF+ LL AC+H GL +
Sbjct: 415 DRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVK 474
Query: 191 KGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+G E F M K + PR EHY+CVVDLLGR GYL EA A I +P++ +W LLSA
Sbjct: 475 EGWELFHCM-KDFEIVPRNEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALLSA 533
Query: 251 CKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEP 310
CK ++ + A ++ ++P + YV LSN++AS+ W V+ R MRE+ + K+
Sbjct: 534 CKIYRCVTLGEYAANKLFSLDPYNTGHYVQLSNLYASSCLWDCVAHVRVLMREKGLNKDL 593
Query: 311 GVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKE 370
G S +EI ++ F +GDKSHP + EI L+ L +K G+VP T + +HD++ EEKE
Sbjct: 594 GYSVIEINGKLQAFHVGDKSHPMAKEIFDELQRLERRLKEVGFVPYTESVLHDLNYEEKE 653
Query: 371 YNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREIIVR 411
NL HSE++A+A+ GLI P K IS++ REIIVR
Sbjct: 654 ENLSFHSERIAVAY-----GLISTAPGTTLRITKNLRACVNCHSAIKLISKLVEREIIVR 708
Query: 412 DASRFHHFRNGKCSCGDYW 430
DA+RFHHF++G CSCGDYW
Sbjct: 709 DANRFHHFKDGLCSCGDYW 727
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 133/254 (52%), Gaps = 2/254 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D+ + L +Y K G + + V + R +++W ++I+G AQNG A + L +
Sbjct: 184 GFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMF 243
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ MR G +PD I VS++ + +++ L QG+ IH V+K G + ++ SL + Y++C
Sbjct: 244 SQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKC 303
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + F + + ++V++W++MI+ Y +G EEA+NLF M + + + VT S +
Sbjct: 304 GLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAV 363
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
A + G E ++ D V K + T ++D+ +CG + E A + + +
Sbjct: 364 LASAQVGSLELA-QWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSV-EFARRVFDRNSDKD 421
Query: 241 AIIWKTLLSACKTH 254
++W ++ H
Sbjct: 422 VVMWSAMIMGYGLH 435
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 113/246 (45%), Gaps = 10/246 (4%)
Query: 6 LVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRM 65
LV GSS G + K+ +V W +I ++N + D ++ Y MR
Sbjct: 94 LVNGSS------NLGQICYARKLFDEFCYPDVFMWNAIIRSYSRNNMYRDTVEMYRWMRW 147
Query: 66 VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD 125
G PD TF V+ +C+EL G IH +++K G DV V + L+++Y++CG +
Sbjct: 148 TGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAKCGHIGV 207
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
+ F + +V W+S+I+ Y +GK EA+ +F QM + + + VS+L A +
Sbjct: 208 AKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTD 267
Query: 186 CGLKEKGMEFFDLMVK-KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
E+G ++K +P L + +CG + A + M N I+W
Sbjct: 268 VDDLEQGRSIHGFVIKMGLEDEPAL--LISLTAFYAKCGLVTVAKSFFDQMKT-TNVIMW 324
Query: 245 KTLLSA 250
++S
Sbjct: 325 NAMISG 330
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 49/90 (54%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ +SL MY K GS+ +V ++V+ W +I G +G + ++ Y++M+
Sbjct: 390 DIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMK 449
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQI 94
G P+ +TF+ ++++C+ + +G ++
Sbjct: 450 QAGVFPNDVTFIGLLTACNHSGLVKEGWEL 479
Score = 41.6 bits (96), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 80/183 (43%), Gaps = 6/183 (3%)
Query: 93 QIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHG 152
QIH +V +G + +++ L++ S G + + K F E Y DV +W+++I +Y +
Sbjct: 74 QIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRNN 133
Query: 153 KGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGME-FFDLMVKKYRRKPRLEH 211
+ + ++ M + TF +L AC+ L + G+ + KY +
Sbjct: 134 MYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTE--LLDFGLSCIIHGQIIKYGFGSDVFV 191
Query: 212 YTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--G 269
+V L +CG++ A + + + W +++S + A R+ ++ G
Sbjct: 192 QNGLVALYAKCGHIGVAKVVFDGL-YHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNG 250
Query: 270 VNP 272
V P
Sbjct: 251 VKP 253
>gi|115476560|ref|NP_001061876.1| Os08g0434000 [Oryza sativa Japonica Group]
gi|42407498|dbj|BAD10615.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|42409483|dbj|BAD09839.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113623845|dbj|BAF23790.1| Os08g0434000 [Oryza sativa Japonica Group]
Length = 601
Score = 334 bits (856), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 170/447 (38%), Positives = 263/447 (58%), Gaps = 17/447 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D + +SL Y G KV MP+R+ IAW LI +N +D L +
Sbjct: 155 GHSPDALLATSLVSSYAACGDGDSARKVFDEMPVRDTIAWNVLITCYTRNRRTKDALKLF 214
Query: 61 NLMR--MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
+ MR G PD +T + ++ +C+ L L G+++ V G ++ V +SLI+MY+
Sbjct: 215 DAMRGGENGAEPDDVTCILLLQACTSLGALDFGEKVWEYAVDHGYGGELKVRNSLITMYT 274
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+CGC+D + + F E VV WS+MI+ +G G++AI+ FE+M + ++ TF
Sbjct: 275 KCGCVDKAYQVFCETPKKSVVTWSAMISGLASNGFGKDAISAFEEMGRSGVAPDEQTFTG 334
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALI-RNMPV 237
+L ACSH GL ++G +FFD+M +Y+ KP + HY C+VDL+GR G LD+A L+ ++M V
Sbjct: 335 VLSACSHSGLVDEGFKFFDIMCYEYQLKPNVHHYGCMVDLMGRAGLLDQAYELVVKDMRV 394
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEF 297
+A IW+TLL AC+ H D+ R+ ++ + Q A YVLL N +A+ + W V+E
Sbjct: 395 APDATIWRTLLGACRIHGHIDLGERVINHLIELKAQQAGDYVLLLNTYAAVEDWGKVAEV 454
Query: 298 REAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDT 357
R+ M+E+ ++ PG + +E+ ++H+F D SHPR EI L+E+ +++ GYVP+
Sbjct: 455 RKLMKEKGIQTTPGCTTVELNGEIHEFIAADASHPRKAEIYEKLDEINKHLRIAGYVPNV 514
Query: 358 GADMHDMDSEEKEYNLKHHSEKLAIAFA-----EH-----TRGLIVMLP----FKYISEI 403
+++HD+DSE KE L +HSEKLAIAFA +H + L V + K S +
Sbjct: 515 SSELHDLDSEGKECALAYHSEKLAIAFALLVTPQHRPIRLAKNLRVCVDCHNFTKVFSGV 574
Query: 404 KNREIIVRDASRFHHFRNGKCSCGDYW 430
+R +IVRD +RFHHF+ +CSC DYW
Sbjct: 575 YHRLVIVRDRTRFHHFKEFQCSCNDYW 601
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 88/175 (50%), Gaps = 7/175 (4%)
Query: 78 VISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSD 137
V+ C LA +Q+HA VV G S D + +SL+S Y+ CG D + K F E D
Sbjct: 134 VLGHCRALA---HARQLHANVVAEGHSPDALLATSLVSSYAACGDGDSARKVFDEMPVRD 190
Query: 138 VVLWSSMIAAYGFHGKGEEAINLFEQMEQKE--FEANDVTFVSLLYACSHCGLKEKGMEF 195
+ W+ +I Y + + ++A+ LF+ M E E +DVT + LL AC+ G + G +
Sbjct: 191 TIAWNVLITCYTRNRRTKDALKLFDAMRGGENGAEPDDVTCILLLQACTSLGALDFGEKV 250
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
++ V + L+ ++ + +CG +D+A + P K + + W ++S
Sbjct: 251 WEYAV-DHGYGGELKVRNSLITMYTKCGCVDKAYQVFCETP-KKSVVTWSAMISG 303
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 334 bits (856), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 170/445 (38%), Positives = 263/445 (59%), Gaps = 15/445 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF LDL+ G++L MY K G + + M +R+ +++ +I+G QNG +E+ L +
Sbjct: 355 GFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMF 414
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M++ G P+K T SV+ +C+ LA L G H + G + D + ++LI MY++C
Sbjct: 415 LEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKC 474
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +D + K F +V W++MI AYG HG G EA+ LF+ M+ + + +DVTF+ L+
Sbjct: 475 GKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLI 534
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL +G +F+ M + + PR+EHY C+VDLL R G E + I MP++ +
Sbjct: 535 SACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLEPD 594
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+W LLSAC+ +K+ ++ ++++I + P+ +VLLSN++++ RW ++ R
Sbjct: 595 VRVWGALLSACRVYKNVELGEGVSKKIQKLGPESTGNFVLLSNMYSAVGRWDDAAQVRFT 654
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGD-KSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
+E+ +K PG SW+EI VH F G +SHP+ +I L+EL EMK GY ++
Sbjct: 655 QKEQGFEKSPGCSWIEISGVVHTFLGGGYRSHPQLTQISNKLDELLVEMKRLGYQAESSY 714
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFA-------EH---TRGLIVM----LPFKYISEIKN 405
D++ EEKE L +HSEKLAIAF +H T+ L V K+IS +
Sbjct: 715 VFQDVEEEEKERVLLYHSEKLAIAFGILSLSPDKHIIVTKNLRVCGDCHTAIKFISLVTK 774
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
R+I VRDASRFHHF++G C+CGD+W
Sbjct: 775 RDITVRDASRFHHFKDGICNCGDFW 799
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 117/242 (48%), Gaps = 5/242 (2%)
Query: 12 LAHMYMKSGSLVEGEKVIRLMPIR--NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
L +Y+ L V MP R NV+ W LI A NG E+ +D Y M G
Sbjct: 57 LVDLYIACSELKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGIT 116
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P++ TF V+ +CS L +G++IH ++ + +V V ++L+ Y++CGCLDD+ +
Sbjct: 117 PNRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEV 176
Query: 130 FLECEYSDVVLWSSMIAAYGFH-GKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F + DVV W+SMI+ + H G +E L QM Q + N T V +L A +
Sbjct: 177 FDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQM-QNDVSPNSSTIVGVLPAVAQVNS 235
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
G E V++ + T ++D+ G+C +D A + M + N + W ++
Sbjct: 236 LRHGKEIHGFCVRRGFVGDVVVG-TGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMV 294
Query: 249 SA 250
A
Sbjct: 295 GA 296
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 137/303 (45%), Gaps = 15/303 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPI-RNVIAWITLIAGKAQNGLAEDVLDQ 59
GF D+V G+ + +Y K + ++ +M I +N + W ++ + L+
Sbjct: 250 GFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALEL 309
Query: 60 YNLMRMVG---FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISM 116
+ + M+ +T +VI C+ L L G +H +K+G LD+ V ++L+SM
Sbjct: 310 FCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSM 369
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
Y++CG ++ +++ F E + D V ++++I+ Y +G EE + +F +M+ T
Sbjct: 370 YAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATL 429
Query: 177 VSLLYACSH-CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM 235
S+L AC+H GL ++ + + ++D+ +CG +D A + M
Sbjct: 430 ASVLPACAHLAGLHYGSCSHCYAIICGFTADTMI--CNALIDMYAKCGKIDTARKVFDRM 487
Query: 236 PVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLL-----SNIHASA 288
K + W T++ A H A + + + G+ P D L+ S + A
Sbjct: 488 H-KRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEG 546
Query: 289 KRW 291
K W
Sbjct: 547 KYW 549
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 136/292 (46%), Gaps = 30/292 (10%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
E ++ ++L Y K G L + ++V M R+V+AW ++I+G + + + D + +
Sbjct: 150 LESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLL 209
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
+ P+ T V V+ + +++ +L G++IH V+ G DV V + ++ +Y +C
Sbjct: 210 VQMQNDVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQ 269
Query: 122 CLDDSVKTF-LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQ---MEQKEFEANDVTFV 177
C+D + + F + + V WS+M+ AY EA+ LF Q ++ + VT
Sbjct: 270 CIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLA 329
Query: 178 SLLYACS-----------HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLD 226
+++ C+ HC + G DLMV ++ + +CG ++
Sbjct: 330 TVIRVCANLTDLSTGTCLHCYAIKSGF-VLDLMVGNT-----------LLSMYAKCGIIN 377
Query: 227 EAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEE--ILGVNPQDAA 276
A M ++ +A+ + ++S + +++ R+ E + G+NP+ A
Sbjct: 378 GAMRFFNEMDLR-DAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKAT 428
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 334 bits (856), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 169/444 (38%), Positives = 257/444 (57%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +LD G+SL MY K G + + M ++ +++ +I+G QNG AE L +
Sbjct: 342 GMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIF 401
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G P T ++++ +CS LA L G H V G + D + +++I MYS+C
Sbjct: 402 RQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKC 461
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + S + F + D++ W++MI YG HG EA++LF++++ + +DVT +++L
Sbjct: 462 GKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVL 521
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL +G +F M + + KPR+ HY C+VDLL R G LDEA I+ MP N
Sbjct: 522 SACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPN 581
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
IW LL+AC+THK+ +M +++++I + P+ +VL+SNI++S RW + R
Sbjct: 582 VRIWGALLAACRTHKNIEMGEQVSKKIQLLGPEGTGNFVLMSNIYSSVGRWDDAAYIRSI 641
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
R KK PG SW+EI +H F G +SHP+S I+ L+EL +MK GY D+
Sbjct: 642 QRHHGYKKSPGCSWVEISGVIHVFIGGHQSHPQSASINKKLQELLVQMKKLGYRADSSFV 701
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAF-----AEHTRGLIVM---------LPFKYISEIKNR 406
+HD++ EEKE L +HSEK+AIAF + +R L+ K+I+ + R
Sbjct: 702 LHDVEEEEKEQILLYHSEKVAIAFGILNTSPSSRILVTKNLRICVDCHSAIKFITLLTER 761
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EI VRDASRFHHF++G C+C D+W
Sbjct: 762 EITVRDASRFHHFKDGICNCQDFW 785
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 146/307 (47%), Gaps = 7/307 (2%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN-LM 63
++V ++L MY K L K+ + +N + W +I G + D L Y+ ++
Sbjct: 244 NVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDML 303
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
+ G P T +++ +C++L L +G+++H ++K+G LD V +SLISMY++CG +
Sbjct: 304 CIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIM 363
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
D++V E D V +S++I+ +G E+A+ +F QM+ T ++LL AC
Sbjct: 364 DNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPAC 423
Query: 184 SHCGLKEKGMEFFDL-MVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
SH + G +V+ + + ++D+ +CG + + + M + + I
Sbjct: 424 SHLAALQHGTCCHGYTVVRGFTNDTSI--CNAIIDMYSKCGKITISREIFDRMQNR-DII 480
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
W T++ H A + +E+ LG+ P D +LS S +G F
Sbjct: 481 SWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSM 540
Query: 301 MRERNVK 307
+ N+K
Sbjct: 541 SQNFNIK 547
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 125/284 (44%), Gaps = 4/284 (1%)
Query: 8 AGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVG 67
A + LA ++ + V +P +V+ W +I A +G + + Y M +G
Sbjct: 43 AATQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLG 102
Query: 68 FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV 127
P TF ++ +CS L L G+ IH G S+D+ V ++L+ MY++CG L +
Sbjct: 103 VTPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQ 162
Query: 128 KTFLECEYS--DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
F + D+V W++MIAA+ FH + I+ QM+Q N T VS+L
Sbjct: 163 TLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQ 222
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
+G ++ + + T ++D+ +C L A I N K N + W
Sbjct: 223 ANALHQGKAIHAYYIRNFFFDNVVLQ-TALLDMYAKCHLLFYARK-IFNTVNKKNDVCWS 280
Query: 246 TLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAK 289
++ H S A + +++L + + P L + + A A+
Sbjct: 281 AMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQ 324
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 128/293 (43%), Gaps = 30/293 (10%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPI--RNVIAWITLIAGKAQNGLAEDVLD 58
G +DL ++L HMY K G L + + + + R+++AW +IA + + L +
Sbjct: 137 GLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIH 196
Query: 59 QYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
M+ G P+ T VS++ + + L QG+ IHA ++ +V + ++L+ MY+
Sbjct: 197 SVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYA 256
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQME-QKEFEANDVTFV 177
+C L + K F + V WS+MI Y H +A+ L++ M T
Sbjct: 257 KCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLA 316
Query: 178 SLLYACS-----------HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLD 226
++L AC+ HC + + GM+ D V ++ + +CG +D
Sbjct: 317 TMLRACAQLTDLKRGKKLHCHMIKSGMD-LDTTVGN-----------SLISMYAKCGIMD 364
Query: 227 EAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYV 279
A + M K + + + ++S C + + A I ++ APY+
Sbjct: 365 NAVGFLDEMIAK-DTVSYSAIISGCVQNGYAEKALLIFRQM---QSSGIAPYL 413
>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
Length = 724
Score = 334 bits (856), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 168/450 (37%), Positives = 259/450 (57%), Gaps = 26/450 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + D V SL MY K GS+ E + M R+V++W T+I +NG E+ +
Sbjct: 281 GLDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALF 340
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ P+ TF V+++C++LA G+QIHA +V+ G S+L+ MYS+C
Sbjct: 341 RHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKC 400
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++++ F D+ W+S++ Y HG+ ++A++ FE + + + + + F+ +L
Sbjct: 401 GDIENAKSVFEILPQPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVL 460
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+H GL +KG+E+F + +K+ ++HY C++DLL R G EA ++I MP+K +
Sbjct: 461 SACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPD 520
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
IW LL C+ H + ++A R A+ + + P++ A YV L+NI+ASA + RE
Sbjct: 521 KYIWAALLGGCRIHGNLELAKRAAKSLFEIEPENPATYVTLANIYASAGMRAEEANIRET 580
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M R + K+PG+SW+EI+ +VH F++GD SHP+S EI YL EL+ MK GYVPDT
Sbjct: 581 MDSRGIVKKPGMSWIEIRREVHVFSVGDNSHPKSKEILEYLSELSKRMKEVGYVPDTNFV 640
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP--------------------FKYI 400
+HD++ E+KE NL +HSEKLA+AF I+ P K+I
Sbjct: 641 LHDVELEQKEENLSYHSEKLAVAFG------IISTPSGTPIKVFKNLRTCVDCHNAIKFI 694
Query: 401 SEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
S I R+IIVRD++RFH F G CSC DYW
Sbjct: 695 SNITGRKIIVRDSNRFHCFEGGSCSCKDYW 724
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 136/281 (48%), Gaps = 5/281 (1%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
DL + + + Y+K G+ + + MP R+ +W +I+G Q+ E+ L+ Y LM+
Sbjct: 183 DLCSWNIMISGYVKGGNFEKARNLFDKMPNRDNFSWTAIISGCVQHNRPEEALELYRLMQ 242
Query: 65 MVGF-RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
+ + +K T S +++ + + +L G++IH +++ G D V SL+ MY +CG +
Sbjct: 243 KHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSI 302
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
+++ F + E DVV W++MI Y +G+ EE LF + ND TF +L AC
Sbjct: 303 EEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNAC 362
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
+ ++ G + MV + + +V + +CG ++ A ++ +P + +
Sbjct: 363 ADLAAEDLGKQIHAYMV-RVGFDSFSSAASALVHMYSKCGDIENAKSVFEILP-QPDLFS 420
Query: 244 WKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLS 282
W +LL H D A E +L G P A +LS
Sbjct: 421 WTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLS 461
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 99/215 (46%), Gaps = 41/215 (19%)
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
+P +++++ C + L +G+Q+HA + K S+ + + + L+ MY++CG L D+ K
Sbjct: 116 KPYASIYLTLLKFCLKQRALKEGKQVHAHI-KTSGSIGLYISNRLLDMYAKCGSLVDAEK 174
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F E + D+ W+ MI+ Y G E+A NLF++M ++ + ++ +++ C
Sbjct: 175 VFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPNRD----NFSWTAIISGCVQHNR 230
Query: 189 KEKGMEFFDLMVKKYRRK----------------PRLEH-------------------YT 213
E+ +E + LM K K P L +
Sbjct: 231 PEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWC 290
Query: 214 CVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
++D+ G+CG ++EA + M + + + W T++
Sbjct: 291 SLLDMYGKCGSIEEARYIFDKMEER-DVVSWTTMI 324
>gi|356562016|ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 705
Score = 334 bits (856), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 168/449 (37%), Positives = 268/449 (59%), Gaps = 19/449 (4%)
Query: 1 GFELDLVAGSSLAHMYM-----KSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAED 55
GFE D ++L HMY S V +KV P+++ + W +I G A+ G +
Sbjct: 257 GFEEDPHVRNTLVHMYCCCCQDGSSGPVSAKKVFDESPVKDSVTWSAMIGGYARAGNSAR 316
Query: 56 VLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLIS 115
+ + M++ G PD+IT VSV+S+C++L L G+ + + + + V + ++LI
Sbjct: 317 AVTLFREMQVTGVCPDEITMVSVLSACADLGALELGKWLESYIERKNIMRSVELCNALID 376
Query: 116 MYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVT 175
M+++CG +D +VK F E + +V W+SMI HG+G EA+ +F++M ++ + +DV
Sbjct: 377 MFAKCGDVDRAVKVFREMKVRTIVSWTSMIVGLAMHGRGLEAVLVFDEMMEQGVDPDDVA 436
Query: 176 FVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM 235
F+ +L ACSH GL +KG +F+ M + P++EHY C+VD+L R G ++EA +R M
Sbjct: 437 FIGVLSACSHSGLVDKGHYYFNTMENMFSIVPKIEHYGCMVDMLSRAGRVNEALEFVRAM 496
Query: 236 PVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVS 295
PV+ N +IW+++++AC + +A+E++ P + YVLLSNI+A RW+ +
Sbjct: 497 PVEPNQVIWRSIVTACHARGELKLGESVAKELIRREPSHESNYVLLSNIYAKLLRWEKKT 556
Query: 296 EFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVP 355
+ RE M + ++K PG + +E+ N++++F GDKSH + EI +EE+ E+K GYVP
Sbjct: 557 KVREMMDVKGMRKIPGSTMIEMNNEIYEFVAGDKSHDQYKEIYEMVEEMGREIKRAGYVP 616
Query: 356 DTGADMHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYIS 401
T + D+D E+KE L HSEKLAIAFA G + + K+IS
Sbjct: 617 TTSQVLLDIDEEDKEDALYRHSEKLAIAFALLSTPPGTPIRIVKNLRVCEDCHSATKFIS 676
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
++ NREI+VRD +RFHHF+NG CSCGD+W
Sbjct: 677 KVYNREIVVRDRNRFHHFKNGLCSCGDFW 705
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 124/259 (47%), Gaps = 12/259 (4%)
Query: 33 PIRNVIAWITLIAGKAQNGLAED-VLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQG 91
P + + TLI AQ ++ L YN MR P+K TF V+ +C+ + L G
Sbjct: 187 PSHDAFLFNTLIRAFAQTTHSKPHALRFYNTMRRHAVSPNKFTFPFVLKACAGMMRLELG 246
Query: 92 QQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV------KTFLECEYSDVVLWSSMI 145
+HA +VK G D V ++L+ MY C C D S K F E D V WS+MI
Sbjct: 247 GAVHASMVKFGFEEDPHVRNTLVHMYC-CCCQDGSSGPVSAKKVFDESPVKDSVTWSAMI 305
Query: 146 AAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRR 205
Y G A+ LF +M+ +++T VS+L AC+ G E G ++ + +++
Sbjct: 306 GGYARAGNSARAVTLFREMQVTGVCPDEITMVSVLSACADLGALELG-KWLESYIERKNI 364
Query: 206 KPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAE 265
+E ++D+ +CG +D A + R M V+ + W +++ H A + +
Sbjct: 365 MRSVELCNALIDMFAKCGDVDRAVKVFREMKVR-TIVSWTSMIVGLAMHGRGLEAVLVFD 423
Query: 266 EIL--GVNPQDAAPYVLLS 282
E++ GV+P D A +LS
Sbjct: 424 EMMEQGVDPDDVAFIGVLS 442
>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
Length = 801
Score = 333 bits (855), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 171/449 (38%), Positives = 266/449 (59%), Gaps = 20/449 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVI-RLMPIR-NVIAWITLIAGKAQNGLAEDVLD 58
G E D ++ +MY K GSL + V R+ P R + I W +++A +GL ++ +
Sbjct: 354 GLEGDTAVANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFE 413
Query: 59 QYNLMRMVGF-RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMY 117
+ M +P+K+TFV+V+ + + ++ QG++IHA VV G D + ++L++MY
Sbjct: 414 LFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMY 473
Query: 118 SRCGCLDDSVKTFLECEYS--DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVT 175
++CG LDD+ F + + DV+ W+S++A Y +G+ E A+ LF M+Q+ N +T
Sbjct: 474 AKCGSLDDAQAIFDKSSSNQEDVIAWTSLVAGYAQYGQAERALKLFWTMQQQGVRPNHIT 533
Query: 176 FVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM 235
F+S L AC+H G E+G E M + P +H++C+VDLLGRCG LDEA L+
Sbjct: 534 FISALTACNHGGKLEQGCELLSGMTPDHGIVPASKHFSCIVDLLGRCGRLDEAEKLLERT 593
Query: 236 PVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVS 295
+A+ I W LL ACK K + R AE I+ ++P+ A+ Y++L++++A+A RW +
Sbjct: 594 S-QADVITWMALLDACKNSKELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAA 652
Query: 296 EFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVP 355
R+ M ++ ++ +PG S +E+ ++H F+ GDKSHP+S EI L LE L +K GYV
Sbjct: 653 TIRKTMLDKGIRADPGCSAVEVNQELHSFSAGDKSHPKSEEIYLELERLHWSIKAAGYVA 712
Query: 356 DTGADMHDMDSEEKEYNLKHHSEKLAIAFAEHT----------RGLIVM----LPFKYIS 401
DTG +HD+ E KE L HSEKLAIAF + + L V K IS
Sbjct: 713 DTGLVLHDVSQEHKERLLMRHSEKLAIAFGLMSTPSGSPLRVIKNLRVCSDCHTATKLIS 772
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
++ R+I++RD+SR+HHF +G CSCGDYW
Sbjct: 773 KVTGRDILMRDSSRYHHFTSGTCSCGDYW 801
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 106/193 (54%), Gaps = 10/193 (5%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMP---IRNVIAWITLIAGKAQNGLAEDVLD 58
FE + V G++L MY K GSL++ ++ +P R+V+ W +I+ +NG A + L
Sbjct: 38 FEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQ 97
Query: 59 QYNLMRMVGFRP-DKITFVSVISSCSE--LATLGQGQQIHAEVVKAGASLDVGVISSLIS 115
+ M G P + +TFVSV+ SC E L +L + IH +V AG + V ++L+
Sbjct: 98 LFRDMDHDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVD 157
Query: 116 MYSRCGCLDDSVKTFL----ECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEA 171
Y + G LDD+ + FL E + +V S+MI+A +G +E++ LF M + +
Sbjct: 158 SYGKLGSLDDAWEVFLRKSDEEPSTSLVTCSAMISACWQNGWPQESLRLFYAMNLEGTKP 217
Query: 172 NDVTFVSLLYACS 184
+ VT VS+L ACS
Sbjct: 218 SGVTLVSVLNACS 230
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 126/264 (47%), Gaps = 12/264 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLM----PIRNVIAWITLIAGKAQNGLAEDV 56
G E + ++L Y K GSL + +V P +++ +I+ QNG ++
Sbjct: 144 GIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSLVTCSAMISACWQNGWPQES 203
Query: 57 LDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLIS 115
L + M + G +P +T VSV+++CS L + + ++ A+ D + ++L++
Sbjct: 204 LRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATAFVLEQAMEVVSATRDNVLGTTLLT 263
Query: 116 MYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVT 175
Y+R L + TF + DVV W++M AAY H + EA+ LFE+M + + T
Sbjct: 264 TYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHRPREALVLFERMLLEGVRPSVAT 323
Query: 176 FVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV----VDLLGRCGYLDEAAAL 231
F++ L AC+ + ++ + LE T V +++ +CG L +A A+
Sbjct: 324 FITALTACA--AYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAV 381
Query: 232 I-RNMPVKANAIIWKTLLSACKTH 254
R P + + I W ++L+A H
Sbjct: 382 FERISPTRRDCITWNSMLAAYGHH 405
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 89/171 (52%), Gaps = 17/171 (9%)
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
RP+ ++++++CS L L G++IH+++ + + ++LISMYS+CG L D+ +
Sbjct: 4 RPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQ 63
Query: 129 TF---LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQK-EFEANDVTFVSLLYACS 184
F DVV W++MI+A+ +G EA+ LF M+ N VTFVS+L +C
Sbjct: 64 AFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCV 123
Query: 185 HCGLKEKGMEFFDLMVKKYR-------RKPRLEHYTCVVDLLGRCGYLDEA 228
GL + D+ R R+ + T +VD G+ G LD+A
Sbjct: 124 EAGL----LSLEDVRAIHGRIVGAGIEREAFVR--TALVDSYGKLGSLDDA 168
>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g09950
gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 995
Score = 333 bits (855), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 175/440 (39%), Positives = 267/440 (60%), Gaps = 19/440 (4%)
Query: 10 SSLAHMYMKSGSLVEGEKVI-RLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
++L Y K G + EK+ R+ R+ + W ++I+G N L LD M G
Sbjct: 556 NALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQ 615
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
R D + +V+S+ + +ATL +G ++HA V+A DV V S+L+ MYS+CG LD +++
Sbjct: 616 RLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALR 675
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQME-QKEFEANDVTFVSLLYACSHCG 187
F + W+SMI+ Y HG+GEEA+ LFE M+ + + VTFV +L ACSH G
Sbjct: 676 FFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAG 735
Query: 188 LKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTL 247
L E+G + F+ M Y PR+EH++C+ D+LGR G LD+ I MP+K N +IW+T+
Sbjct: 736 LLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTV 795
Query: 248 LSAC--KTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERN 305
L AC + ++ + AE + + P++A YVLL N++A+ RW+ + + R+ M++ +
Sbjct: 796 LGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDAD 855
Query: 306 VKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMD 365
VKKE G SW+ +K+ VH F GDKSHP + I L+EL +M+ GYVP TG ++D++
Sbjct: 856 VKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLE 915
Query: 366 SEEKEYNLKHHSEKLAIAF---AEHTRGLIVML------------PFKYISEIKNREIIV 410
E KE L +HSEKLA+AF A+ + L + + FKYIS+I+ R+II+
Sbjct: 916 QENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIIL 975
Query: 411 RDASRFHHFRNGKCSCGDYW 430
RD++RFHHF++G CSC D+W
Sbjct: 976 RDSNRFHHFQDGACSCSDFW 995
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 119/243 (48%), Gaps = 2/243 (0%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G+ L +MY K GS+ + +V M ++ ++W ++I G QNG + +++Y MR
Sbjct: 352 GNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDI 411
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
P T +S +SSC+ L GQQIH E +K G L+V V ++L+++Y+ G L++ K
Sbjct: 412 LPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRK 471
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKG-EEAINLFEQMEQKEFEANDVTFVSLLYACSHCG 187
F D V W+S+I A + EA+ F ++ + N +TF S+L A S
Sbjct: 472 IFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLS 531
Query: 188 LKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTL 247
E G + L +K ++ G+CG +D + M + + + W ++
Sbjct: 532 FGELGKQIHGLALKN-NIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSM 590
Query: 248 LSA 250
+S
Sbjct: 591 ISG 593
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 137/286 (47%), Gaps = 15/286 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ ++L + Y+++G V KV MP+RN ++W +++G ++NG ++ L M
Sbjct: 35 DVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMV 94
Query: 65 MVGFRPDKITFVSVISSCSELATLGQ--GQQIHAEVVKAGASLDVGVISSLISMYSRC-G 121
G ++ FVSV+ +C E+ ++G G+QIH + K ++D V + LISMY +C G
Sbjct: 95 KEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIG 154
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+ ++ F + E + V W+S+I+ Y G A +F M+ + TF SL+
Sbjct: 155 SVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLV- 213
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY---TCVVDLLGRCGYLDEAAALIRNMPVK 238
+ C L E + + ++ ++ L + +V + G L A + M +
Sbjct: 214 -TTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETR 272
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRI---AEEILGVNPQDAAPYVLL 281
NA+ L+ K + A ++ ++ V+P+ YV+L
Sbjct: 273 -NAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE---SYVIL 314
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 118/257 (45%), Gaps = 11/257 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G DL GS L + KSGSL KV M RN + L+ G + E+ +
Sbjct: 238 GLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLF 297
Query: 61 -NLMRMVGFRPDKITFVSVISSCSELAT-----LGQGQQIHAEVVKAG-ASLDVGVISSL 113
++ M+ P+ ++V ++SS E + L +G+++H V+ G VG+ + L
Sbjct: 298 MDMNSMIDVSPE--SYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGL 355
Query: 114 ISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEAND 173
++MY++CG + D+ + F D V W+SMI +G EA+ ++ M + +
Sbjct: 356 VNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGS 415
Query: 174 VTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIR 233
T +S L +C+ + G + + K + ++ L GYL+E +
Sbjct: 416 FTLISSLSSCASLKWAKLGQQIHGESL-KLGIDLNVSVSNALMTLYAETGYLNECRKIFS 474
Query: 234 NMPVKANAIIWKTLLSA 250
+MP + + + W +++ A
Sbjct: 475 SMP-EHDQVSWNSIIGA 490
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 79/150 (52%), Gaps = 5/150 (3%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
E D+V GS+L MY K G L + MP+RN +W ++I+G A++G E+ L +
Sbjct: 650 LESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFE 709
Query: 62 LMRMVG-FRPDKITFVSVISSCSELATLGQG-QQIHAEVVKAGASLDVGVISSLISMYSR 119
M++ G PD +TFV V+S+CS L +G + + G + + S + + R
Sbjct: 710 TMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGR 769
Query: 120 CGCLDDSVKTFLE--CEYSDVVLWSSMIAA 147
G L D ++ F+E +V++W +++ A
Sbjct: 770 AGEL-DKLEDFIEKMPMKPNVLIWRTVLGA 798
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 2/112 (1%)
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
+S + SC + G + H+ + K DV + ++LI+ Y G + K F E
Sbjct: 7 LSFVQSC--VGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPL 64
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCG 187
+ V W+ +++ Y +G+ +EA+ M ++ +N FVS+L AC G
Sbjct: 65 RNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIG 116
>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Glycine max]
Length = 693
Score = 333 bits (855), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 170/448 (37%), Positives = 263/448 (58%), Gaps = 24/448 (5%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
LD V S+L +Y K GSL E + M R+V++W T+I ++G E+ +
Sbjct: 251 LNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFR 310
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
+ G RP++ TF V+++C++ A G+++H ++ AG IS+L+ MYS+CG
Sbjct: 311 DLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCG 370
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+ + F E D+V W+S+I Y +G+ +EA++ FE + Q + + VT+V +L
Sbjct: 371 NTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLS 430
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
AC+H GL +KG+E+F + +K+ +HY CV+DLL R G EA +I NMPVK +
Sbjct: 431 ACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDK 490
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
+W +LL C+ H + ++A R A+ + + P++ A Y+ L+NI+A+A W V+ R+ M
Sbjct: 491 FLWASLLGGCRIHGNLELAKRAAKALYEIEPENPATYITLANIYANAGLWSEVANVRKDM 550
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
+ K+PG SW+EIK QVH F +GD SHP++ +I +L EL+ ++K GYVPDT +
Sbjct: 551 DNMGIVKKPGKSWIEIKRQVHVFLVGDTSHPKTSDIHEFLGELSKKIKEEGYVPDTNFVL 610
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISE 402
HD++ E+KE NL +HSEKLA+ F G+I P KYIS+
Sbjct: 611 HDVEEEQKEQNLVYHSEKLAVVF-----GIISTPPGTPIKVFKNLRTCVDCHTAIKYISK 665
Query: 403 IKNREIIVRDASRFHHFRNGKCSCGDYW 430
I R+I VRD++RFH F +G CSC DYW
Sbjct: 666 IVQRKITVRDSNRFHCFEDGSCSCKDYW 693
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 127/278 (45%), Gaps = 6/278 (2%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM- 63
DL + +++ Y K G L + K+ MP R+ +W I+G + + L+ + +M
Sbjct: 152 DLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQPREALELFRVMQ 211
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
R +K T S +++ + + L G++IH +++ +LD V S+L+ +Y +CG L
Sbjct: 212 RHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGKCGSL 271
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
D++ F + + DVV W++MI G+ EE LF + Q N+ TF +L AC
Sbjct: 272 DEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNAC 331
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
+ + G E M+ P + +V + +CG A + M + + +
Sbjct: 332 ADHAAEHLGKEVHGYMMHA-GYDPGSFAISALVHMYSKCGNTRVARRVFNEMH-QPDLVS 389
Query: 244 WKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYV 279
W +L+ + D A E +L G P D YV
Sbjct: 390 WTSLIVGYAQNGQPDEALHFFELLLQSGTKP-DQVTYV 426
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 93/190 (48%), Gaps = 3/190 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G++ A S+L HMY K G+ +V M ++++W +LI G AQNG ++ L +
Sbjct: 351 GYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQPDEALHFF 410
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQG-QQIHAEVVKAGASLDVGVISSLISMYSR 119
L+ G +PD++T+V V+S+C+ + +G + H+ K G + +I + +R
Sbjct: 411 ELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLAR 470
Query: 120 CGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
G ++ D LW+S++ HG E A + + + E E N T+++
Sbjct: 471 SGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGNLELAKRAAKALYEIEPE-NPATYIT 529
Query: 179 LLYACSHCGL 188
L ++ GL
Sbjct: 530 LANIYANAGL 539
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 98/226 (43%), Gaps = 42/226 (18%)
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
L+ RP + ++I++C L G+++HA + V + + L+ MY++CG
Sbjct: 77 LLHRTDHRPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISNRLLDMYAKCG 136
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE-FEANDVTFVSLL 180
L D+ F E + D+ W++MI Y G+ E+A LF++M Q++ F N ++
Sbjct: 137 SLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSWN----AAIS 192
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKP------------------RLEH----------- 211
+H +E +E F +M + R RL
Sbjct: 193 GYVTHNQPRE-ALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTEL 251
Query: 212 ------YTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSAC 251
++ ++DL G+CG LDEA + M + + + W T++ C
Sbjct: 252 NLDEVVWSALLDLYGKCGSLDEARGIFDQMKDR-DVVSWTTMIHRC 296
>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 839
Score = 333 bits (855), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 170/438 (38%), Positives = 267/438 (60%), Gaps = 18/438 (4%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQ--NGLAEDVLDQYNLMRMV 66
G+ L +Y KSG + K ++ +N+++ + + N +E LD+ + V
Sbjct: 404 GNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNVKDFNLNSEQDLDRE--VEYV 461
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
G T+ S++S + + T+G+G+QIHA VVK G D+ V ++LISMYS+CG + +
Sbjct: 462 GSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAA 521
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHC 186
++ F + E +V+ W+S+I + HG +A+ LF M + + NDVT++++L ACSH
Sbjct: 522 LQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLETGVKPNDVTYIAVLSACSHV 581
Query: 187 GLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKT 246
GL ++ + F M + PR+EHY C+VDLLGR G L EA I +MP A+A++W+T
Sbjct: 582 GLIDEAWKHFTSMRDNHGIVPRMEHYACMVDLLGRSGLLSEAIEFINSMPFDADALVWRT 641
Query: 247 LLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNV 306
L +C+ H++T + A+ IL P D A Y+LLSN++A+ RW+ V+ R+ M+++ +
Sbjct: 642 FLGSCRVHRNTKLGEHAAKMILEREPHDPATYILLSNLYATEGRWEDVAAIRKNMKQKQI 701
Query: 307 KKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDS 366
KE G SW+E++NQVH+F +GD HP++ +I L+EL ++K GYVP+T +HD++
Sbjct: 702 TKEAGSSWIEVENQVHKFHVGDTLHPKAQQIYEKLDELALKIKNVGYVPNTDFVLHDVED 761
Query: 367 EEKEYNLKHHSEKLAIAFA----EHTRGLIVM----------LPFKYISEIKNREIIVRD 412
E+KE L HSEKLA+AFA + + + V KYIS + REI+VRD
Sbjct: 762 EQKEQYLFQHSEKLAVAFALISTPNPKPIRVFKNLRVCGDCHTAIKYISMVSGREIVVRD 821
Query: 413 ASRFHHFRNGKCSCGDYW 430
A+RFHH ++G CSC DYW
Sbjct: 822 ANRFHHMKDGTCSCNDYW 839
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 102/190 (53%), Gaps = 7/190 (3%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGE---KVIRLMPIRNVIAWITLIAGKAQNGLAEDVLD 58
F+ + G L M++K SL + E KV M +NV+ W +I AQ G ++ +D
Sbjct: 188 FDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAID 247
Query: 59 QY-NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMY 117
+ ++ G+ PD+ T +IS C+E+ L G+++H+ V+++G LD+ V SL+ MY
Sbjct: 248 LFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMY 307
Query: 118 SRCGCLDDSVKTFLECEYSDVVLWSSMIAAY--GFHGKGEEAINLFEQM-EQKEFEANDV 174
++CG + ++ K F +V+ W++++ Y G G EA+ +F M Q N
Sbjct: 308 AKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCF 367
Query: 175 TFVSLLYACS 184
TF +L AC+
Sbjct: 368 TFSGVLKACA 377
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 129/293 (44%), Gaps = 19/293 (6%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAG--KAQNGLAEDVLD 58
G LDL G SL MY K G + E KV M NV++W L+ G + G + +
Sbjct: 292 GLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMR 351
Query: 59 QY-NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMY 117
+ N++ G P+ TF V+ +C+ L G+Q+H + +K G S V + L+S+Y
Sbjct: 352 MFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVY 411
Query: 118 SRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINL-FEQMEQKEFE-----A 171
++ G ++ + K F DV+ ++++ + NL EQ +E E
Sbjct: 412 AKSGRMESARKCF------DVLFEKNLVSETVVDDTNVKDFNLNSEQDLDREVEYVGSGV 465
Query: 172 NDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAAL 231
+ T+ SLL + G KG E MV K + L ++ + +CG EAA
Sbjct: 466 SSFTYASLLSGAACIGTIGKG-EQIHAMVVKIGFRTDLSVNNALISMYSKCGN-KEAALQ 523
Query: 232 IRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLS 282
+ N N I W ++++ H A + +L GV P D +LS
Sbjct: 524 VFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLETGVKPNDVTYIAVLS 576
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 89/187 (47%), Gaps = 7/187 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF DL ++L MY K G+ +V M NVI W ++I G A++G A L+ +
Sbjct: 497 GFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELF 556
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQG-QQIHAEVVKAGASLDVGVISSLISMYSR 119
M G +P+ +T+++V+S+CS + + + + + G + + ++ + R
Sbjct: 557 YNMLETGVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYACMVDLLGR 616
Query: 120 CGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGK---GEEAINLFEQMEQKEFEANDVT 175
G L ++++ + +D ++W + + + H GE A + +E++ +
Sbjct: 617 SGLLSEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKMI--LEREPHDPATYI 674
Query: 176 FVSLLYA 182
+S LYA
Sbjct: 675 LLSNLYA 681
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 73 ITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTF-- 130
IT ++ C G+ +H ++ + LD +++SLI++YS+ +D + F
Sbjct: 53 ITSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKS---NDPITAFSI 109
Query: 131 ---LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQ-MEQKEFEANDVTFVSLLYACSHC 186
+E DVV +SS+I+ + + +A+ +F+Q + Q N+ F +++ AC
Sbjct: 110 FQSMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKG 169
Query: 187 GLKEKGMEFFDLMVKKYRRKPRLEHYTCV----VDLLGR-CGYLD-EAAALIRNMPVKAN 240
G + G+ F ++K + + CV +D+ + C D E+A + + + N
Sbjct: 170 GFFKTGLCLFGFVLK----TGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKN 225
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEIL 268
+ W +++ + D A + E+L
Sbjct: 226 VVTWTLMITRLAQYGYNDEAIDLFLEML 253
>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
Length = 687
Score = 333 bits (855), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 172/451 (38%), Positives = 263/451 (58%), Gaps = 26/451 (5%)
Query: 1 GFELDLVAGSSLAHMYMK--SGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLD 58
G + ++L ++Y + +G L E +++ M + + AW LI G +G + + L+
Sbjct: 242 GLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREALE 301
Query: 59 QYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
Y +++ DK+TF+SV+++C+ +L +G+ IH+ V+ G DV V ++L +MYS
Sbjct: 302 TYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYS 361
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+CG ++++ + F V W+ M+ AY HG+ EE + L +MEQ+ + N +TFVS
Sbjct: 362 KCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVS 421
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+L +CSH GL +G ++F + + + EHY C+VDLLGR G L EA I MP +
Sbjct: 422 VLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPSE 481
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
+ W +LL AC+ HK D A ++L ++P +++ V+LSNI++ W+ ++ R
Sbjct: 482 PEIVTWASLLGACRVHKDLDRGKLAARKLLELDPGNSSASVVLSNIYSERGDWKNAAKLR 541
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
AM R VKK PG+S +++KN+VH+F + D SHPR+ EI +EEL M+ GYVPDT
Sbjct: 542 RAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELCFAMREAGYVPDTK 601
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVM-------------------LPFKY 399
+HD+D E+KE L +HSEKLAIAF GLI K+
Sbjct: 602 MVLHDVDEEQKESLLAYHSEKLAIAF-----GLISTPEKSSLHIFKNLRVCEDCHTATKF 656
Query: 400 ISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
IS+I REI+VRD RFHHFR+G CSC DYW
Sbjct: 657 ISKITGREIVVRDNHRFHHFRDGSCSCKDYW 687
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 144/289 (49%), Gaps = 7/289 (2%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
LD+ ++L + Y K GSL + KV MP R+V W ++I+ + + + + + M
Sbjct: 43 LDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRM 102
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
+ G R D++TF+S++ +C L G+ + + + LD+ V ++LI+MY+RC
Sbjct: 103 QHEGERCDRVTFLSILDACVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSP 162
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA- 182
+++ + F + +++ WS++I A+ HG EA+ F M+Q+ N VTF+SLL
Sbjct: 163 ENAAQVFGRMKQKNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGF 222
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRC--GYLDEAAALIRNMPVKAN 240
+ GL+E + L++ ++ +V++ GRC G LD A +++ M +
Sbjct: 223 TTPSGLEE--LSRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMD-EQQ 279
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEI-LGVNPQDAAPYVLLSNIHASA 288
W L++ H + A + + L P D ++ + N S+
Sbjct: 280 ITAWNVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFISVLNACTSS 328
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 134/270 (49%), Gaps = 26/270 (9%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
FELDL G++L MY + S +V M +N+I W +I A +G + L +
Sbjct: 142 FELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITWSAIITAFADHGHCGEALRYFR 201
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC- 120
+M+ G P+++TF+S+++ + + L + +IH + + G + ++L+++Y RC
Sbjct: 202 MMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMSNALVNVYGRCE 261
Query: 121 -GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G LD + E + + W+ +I Y HG+ EA+ +++++ + + VTF+S+
Sbjct: 262 TGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFISV 321
Query: 180 LYACS-----------HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEA 228
L AC+ H E G++ D++VK + ++ +CG ++ A
Sbjct: 322 LNACTSSTSLAEGKMIHSNAVECGLD-SDVIVK-----------NALTNMYSKCGSMENA 369
Query: 229 AALIRNMPVKANAIIWKTLLSACKTHKSTD 258
+ +MP+++ A+ W +L A H ++
Sbjct: 370 RRIFDSMPIRS-AVSWNGMLQAYAQHGESE 398
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 102/192 (53%), Gaps = 2/192 (1%)
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M + G + + ITF++V++S + L +G+ IH+ V ++ SLDV V ++L++ Y++CG
Sbjct: 1 MLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGS 60
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
L D+ K F V W+SMI+AY + EA +F++M+ + + VTF+S+L A
Sbjct: 61 LTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDA 120
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
C + + G + + + + L T ++ + RC + AA + M K N I
Sbjct: 121 CVNPENLQHGKHVRE-SISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQK-NLI 178
Query: 243 IWKTLLSACKTH 254
W +++A H
Sbjct: 179 TWSAIITAFADH 190
>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
Length = 1539
Score = 333 bits (855), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 180/443 (40%), Positives = 266/443 (60%), Gaps = 17/443 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVI-RLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
D G++L Y K G + E EK+ R+ R+ ++W ++I+G N L +D M
Sbjct: 1097 DTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFM 1156
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
G R D TF +V+S+C+ +ATL +G ++HA ++A DV V S+L+ MYS+CG +
Sbjct: 1157 MQKGQRLDSFTFATVLSACASVATLERGMEVHACGIRACMESDVVVGSALVDMYSKCGRI 1216
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVT-FVSLLYA 182
D + + F +V W+SMI+ Y HG GE+A+ LF +M + V + +L A
Sbjct: 1217 DYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVAPLLGVLSA 1276
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
CSH G E+G E F M + YR PR+EH++C+VDLLGR G LDE I +MP+K N +
Sbjct: 1277 CSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVL 1336
Query: 243 IWKTLLSAC--KTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
IW+T+L AC ++T++ R AE +L + PQ+A YVLL+N++AS ++W+ V++ R A
Sbjct: 1337 IWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARXA 1396
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+E VKKE G SW+ +K+ VH F GDK HP I L EL +M+ GY+P T
Sbjct: 1397 MKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDXIYDKLRELNRKMRDAGYIPQTKYA 1456
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVML-------------PFKYISEIKNRE 407
+ D++ E KE L +HSEK+A+AF + + + F YIS+I R+
Sbjct: 1457 LFDLELENKEELLSYHSEKIAVAFVLTRQSALPIRIMKNLRVCGDCHSAFGYISKIVGRQ 1516
Query: 408 IIVRDASRFHHFRNGKCSCGDYW 430
I++RD++RFHHF +GKCSCGDYW
Sbjct: 1517 IVLRDSNRFHHFEDGKCSCGDYW 1539
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 123/243 (50%), Gaps = 2/243 (0%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G+ L +MY KSG++ + V LM ++ ++W +LI+G QN +ED + + MR G
Sbjct: 898 GNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGS 957
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
P T +S +SSC+ L + G+QIH + +K G DV V ++L+++Y+ GC + +K
Sbjct: 958 MPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLK 1017
Query: 129 TFLECEYSDVVLWSSMIAAYG-FHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCG 187
F D V W+S+I A +A+ F +M + + + VTF+++L A S
Sbjct: 1018 VFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLS 1077
Query: 188 LKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTL 247
L E + L V KY ++ G+CG ++E + M + + W ++
Sbjct: 1078 LHEVSHQIHAL-VLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSM 1136
Query: 248 LSA 250
+S
Sbjct: 1137 ISG 1139
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 140/281 (49%), Gaps = 6/281 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + D+ ++L +Y ++G E KV LMP + ++W ++I + + + +Y
Sbjct: 991 GLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKY 1050
Query: 61 NL-MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
L M G+ ++TF++++S+ S L+ QIHA V+K S D + ++L+S Y +
Sbjct: 1051 FLEMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGK 1110
Query: 120 CGCLDDSVKTFLE-CEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
CG +++ K F E D V W+SMI+ Y + +A++L M QK + TF +
Sbjct: 1111 CGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFAT 1170
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+L AC+ E+GME ++ + + +VD+ +CG +D A+ MP++
Sbjct: 1171 VLSACASVATLERGMEVHACGIRACMESDVVVG-SALVDMYSKCGRIDYASRFFELMPLR 1229
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAP 277
N W +++S H + A ++ ++ G P AP
Sbjct: 1230 -NVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVAP 1269
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 135/291 (46%), Gaps = 13/291 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF +L ++L ++Y++ G L +K+ M RN++ W LI+G QNG ++ ++
Sbjct: 574 GFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARF 633
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLG--QGQQIHAEVVKAGASLDVGVISSLISMYS 118
M GF P+ F S + +C E G G QIH + K DV V + LISMY
Sbjct: 634 RDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYG 693
Query: 119 RC-GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQK----EFEAND 173
C +D+ F + + W+S+I+ Y G A +LF M+++ F+ N+
Sbjct: 694 SCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQKEGLGFSFKPNE 753
Query: 174 VTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY---TCVVDLLGRCGYLDEAAA 230
TF SL+ A C + G+ + M+ + + L+ + +V R G D+A
Sbjct: 754 YTFGSLITAA--CSSVDFGLCVLEQMLARVEKSGFLQDLYVGSALVSGFARFGLTDDAKN 811
Query: 231 LIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLL 281
+ M V+ N + L+ K + A ++ E+ + ++ YV+L
Sbjct: 812 IFEQMGVR-NVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVVL 861
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 99/193 (51%), Gaps = 8/193 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF DL GS+L + + G + + + M +RNV++ L+ G + E +
Sbjct: 785 GFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVF 844
Query: 61 NLMR-MVGFRPDKITFVSVISSCSELATLGQGQ----QIHAEVVKAGASLD-VGVISSLI 114
+ M+ +VG D ++V ++S+ SE + L +G+ ++HA V++ G + + V + + L+
Sbjct: 845 HEMKDLVGINSD--SYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLV 902
Query: 115 SMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDV 174
+MY++ G + D+ F D V W+S+I+ + E+A F +M + ++
Sbjct: 903 NMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNF 962
Query: 175 TFVSLLYACSHCG 187
T +S L +C+ G
Sbjct: 963 TLISTLSSCASLG 975
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E D+V GS+L MY K G + + LMP+RNV +W ++I+G A++G E L +
Sbjct: 1197 ESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTR 1256
Query: 63 MRMVGFRPDKIT-FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV--ISSLISMYSR 119
M + G PD + + V+S+CS + + +G + H + + L V S ++ + R
Sbjct: 1257 MMLDGQPPDHVAPLLGVLSACSHVGFVEEGFE-HFKSMSEVYRLSPRVEHFSCMVDLLGR 1315
Query: 120 CGCLDDSVKTFLEC--EYSDVVLWSSMIAA 147
G LD+ V F+ +V++W +++ A
Sbjct: 1316 AGKLDE-VGDFINSMPMKPNVLIWRTVLGA 1344
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 91/184 (49%), Gaps = 15/184 (8%)
Query: 74 TFVSVI-----SSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
TF S+I S CSE + +++H + +K G ++ + ++LI++Y R G L + K
Sbjct: 546 TFESLINRYQGSCCSE-----EARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQK 600
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F E ++V W+ +I+ Y +GK +EA F M + F N F S L AC G
Sbjct: 601 LFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGP 660
Query: 189 K--EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRC-GYLDEAAALIRNMPVKANAIIWK 245
+ G++ L + K R + ++ + G C ++A ++ + ++ N+I W
Sbjct: 661 SGCKLGVQIHGL-ISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIGIR-NSISWN 718
Query: 246 TLLS 249
+++S
Sbjct: 719 SIIS 722
>gi|449437256|ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 632
Score = 333 bits (855), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 171/441 (38%), Positives = 259/441 (58%), Gaps = 15/441 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+V+ ++L Y SG + + V M +N+++W T+I+G A+N D ++ + M+
Sbjct: 192 DVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARNEKYADAIELFRQMQ 251
Query: 65 MVG-FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
G P+ +T VSV+S+C+ L L G+ IH + + + + + ++L MY++CGC+
Sbjct: 252 HEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCV 311
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
++ F E DV+ WS +I +G EA N F +M + E ND++F+ LL AC
Sbjct: 312 LEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTAC 371
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
+H GL +KG+E+FD+M + Y P++EHY CVVDLL R G LD+A +LI +MP++ N I+
Sbjct: 372 THAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIV 431
Query: 244 WKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
W LL C+ +K + R+ IL ++ + V L+N++AS R + R MR+
Sbjct: 432 WGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANVYASMGRLDDAASCRLRMRD 491
Query: 304 RNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHD 363
K PG SW+EI N V++F MGD SHP+S+ I + EL +MK+ GY P T +H+
Sbjct: 492 NKSMKTPGCSWIEINNSVYEFFMGDSSHPQSLRIYSMIRELKWKMKVAGYKPKTDLVIHN 551
Query: 364 MDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNREII 409
+D EEKE L HSEKLA+AF + G + + K IS+I REI+
Sbjct: 552 IDEEEKEDALSTHSEKLALAFGLINTSEGTTIRIVKNLRVCNDCHDAIKIISKIVEREIV 611
Query: 410 VRDASRFHHFRNGKCSCGDYW 430
VRD SRFHHF++GKCSC DYW
Sbjct: 612 VRDRSRFHHFKDGKCSCNDYW 632
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 130/288 (45%), Gaps = 38/288 (13%)
Query: 31 LMPIRNVIAWITLIAGKAQNGLAEDVLDQYN--LMRMVGFRPDKITFVSVISSCSELATL 88
+ N+ A+ L+ +Q+ + +N L+ PD+ TF SV+ +C+ LA +
Sbjct: 84 FLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQV 143
Query: 89 GQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAY 148
+GQ++H V K G ++ V +SL+ +Y + GC + K F E DVV W+++I+ Y
Sbjct: 144 LEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGY 203
Query: 149 GFHG-------------------------------KGEEAINLFEQMEQK-EFEANDVTF 176
F G K +AI LF QM+ + NDVT
Sbjct: 204 CFSGMVDKARMVFDGMMEKNLVSWSTMISGYARNEKYADAIELFRQMQHEGGLAPNDVTL 263
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
VS+L AC+H G + G ++ +++ + + L + D+ +CG + EA + M
Sbjct: 264 VSVLSACAHLGALDLG-KWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMH 322
Query: 237 VKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLS 282
+ + I W ++ + + A E++ G+ P D + LL+
Sbjct: 323 ER-DVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLT 369
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 93/186 (50%), Gaps = 9/186 (4%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E+ L G++LA MY K G ++E + V M R+VI+W +I G A G A + + +
Sbjct: 292 EVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAE 351
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSRCG 121
M G P+ I+F+ ++++C+ + +G + + + G + + ++ + SR G
Sbjct: 352 MIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAG 411
Query: 122 CLD--DSVKTFLECEYSDVVLWSSMIAA---YGFHGKGEEAINLFEQMEQKEFEANDVTF 176
LD +S+ + + +V++W +++ Y +GE + + +E + + +
Sbjct: 412 RLDQAESLINSMPMQ-PNVIVWGALLGGCRIYKDAERGERVV--WRILELDSNHSGSLVY 468
Query: 177 VSLLYA 182
++ +YA
Sbjct: 469 LANVYA 474
>gi|224133790|ref|XP_002327681.1| predicted protein [Populus trichocarpa]
gi|222836766|gb|EEE75159.1| predicted protein [Populus trichocarpa]
Length = 654
Score = 333 bits (855), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 174/448 (38%), Positives = 260/448 (58%), Gaps = 27/448 (6%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+++ + L Y+KSG++ ++ +P+++++AW +++G AQN + + + M+
Sbjct: 212 DVISWTELISAYVKSGNMESAGELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQ 271
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIH--AEVVKAGASLDVGVISSLISMYSRCGC 122
G D+IT + VIS+C++L I AE + G V V S+LI MYS+CG
Sbjct: 272 EFGVETDEITLIGVISACAQLGAAKYADWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGS 331
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
+ D+ + F + +V +SSMI + HG+ +A+ LF++M + E + N VTF+ +L A
Sbjct: 332 VGDAYRVFQGMKERNVYSYSSMILGFAMHGRVHDAMKLFDEMVKTEIKPNRVTFIGVLTA 391
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
CSH G+ E+G + F+LM K Y KP +HYTC+VDLLGR G L EA L++ MP++ +
Sbjct: 392 CSHAGMVEQGWQIFELMEKCYGIKPSADHYTCMVDLLGRAGRLQEAHELVKTMPIEPHGG 451
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMR 302
+W LL AC+ HKS D+A A + + P Y+LL+NI+AS RW VS R+ MR
Sbjct: 452 VWGALLGACRIHKSPDIAAIAANHLFELEPYCIGNYILLANIYASCGRWNDVSTVRKLMR 511
Query: 303 ERNVKKEPGVSWLEI-KNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
R ++K P SW+E K VH+F GD +HPRS EI LE+L ++ +GY P +
Sbjct: 512 TRGLRKNPAFSWIESEKGMVHEFFSGDMTHPRSGEIKQALEDLLDRLEAKGYQPHLSSVS 571
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPFKYI-------------------SE 402
+D++ E+K L HSEKLA+AF GLI +P I S+
Sbjct: 572 YDVNDEDKRRILMTHSEKLALAF-----GLISTIPGSKIRIVKNLRICEDCHSVICGASQ 626
Query: 403 IKNREIIVRDASRFHHFRNGKCSCGDYW 430
I REIIVRD RFHHF +G CSCG++W
Sbjct: 627 ITGREIIVRDIMRFHHFHDGICSCGNFW 654
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 111/242 (45%), Gaps = 34/242 (14%)
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGA-SLDVGVISSLISMYS 118
Y+LMR G P TF ++ +C +G G+QIH + + G D+ V +S+I MY
Sbjct: 134 YSLMRKEGVVPVSFTFTALFKACGAKMDVGLGRQIHGQTILVGGFGEDLHVGNSMIDMYI 193
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAY-----------------------------G 149
+CG L+ K F E DV+ W+ +I+AY G
Sbjct: 194 KCGFLECGRKVFDEMPNRDVISWTELISAYVKSGNMESAGELFDGLPVKDMVAWTVMVSG 253
Query: 150 F--HGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVK-KYRRK 206
F + K EAI FE+M++ E +++T + ++ AC+ G + D+ K ++ K
Sbjct: 254 FAQNAKPREAIMFFEKMQEFGVETDEITLIGVISACAQLGAAKYADWIRDVAEKSEFGGK 313
Query: 207 PRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEE 266
+ + ++D+ +CG + +A + + M + N + +++ H A ++ +E
Sbjct: 314 HSVVVGSALIDMYSKCGSVGDAYRVFQGMKER-NVYSYSSMILGFAMHGRVHDAMKLFDE 372
Query: 267 IL 268
++
Sbjct: 373 MV 374
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 78/155 (50%), Gaps = 6/155 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + +V GS+L MY K GS+ + +V + M RNV ++ ++I G A +G D + +
Sbjct: 311 GGKHSVVVGSALIDMYSKCGSVGDAYRVFQGMKERNVYSYSSMILGFAMHGRVHDAMKLF 370
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSR 119
+ M +P+++TF+ V+++CS + QG QI + K G + ++ + R
Sbjct: 371 DEMVKTEIKPNRVTFIGVLTACSHAGMVEQGWQIFELMEKCYGIKPSADHYTCMVDLLGR 430
Query: 120 CGCLDDS---VKTFLECEYSDVVLWSSMIAAYGFH 151
G L ++ VKT + V W +++ A H
Sbjct: 431 AGRLQEAHELVKTMPIEPHGGV--WGALLGACRIH 463
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 106/240 (44%), Gaps = 17/240 (7%)
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS--VKTFLEC 133
V+ + C L Q +Q+HA ++ G V++ LI ++ D + F +
Sbjct: 50 VTTLDGCKNLT---QIKQVHARILLNGLDQSCYVLAKLIRTLTKLNIPVDPYPLSIFNQV 106
Query: 134 EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS---HCGLKE 190
Y + L++++I Y + +E+ + M ++ TF +L AC GL
Sbjct: 107 NYPNPFLYNALIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKMDVGLGR 166
Query: 191 KGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+ + ++V + L ++D+ +CG+L+ + MP + + I W L+SA
Sbjct: 167 Q-IHGQTILVGGFGED--LHVGNSMIDMYIKCGFLECGRKVFDEMPNR-DVISWTELISA 222
Query: 251 CKTHKSTDMAGRIAEEILGVNPQDAAPY-VLLSNIHASAKRWQGVSEFREAMRERNVKKE 309
+ + AG + + G+ +D + V++S +AK + + F E M+E V+ +
Sbjct: 223 YVKSGNMESAGELFD---GLPVKDMVAWTVMVSGFAQNAKPREAIM-FFEKMQEFGVETD 278
>gi|79527297|ref|NP_198857.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171829|sp|Q9FND6.1|PP411_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g40410, mitochondrial; Flags: Precursor
gi|10178153|dbj|BAB11598.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|17065126|gb|AAL32717.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|30725418|gb|AAP37731.1| At5g40410 [Arabidopsis thaliana]
gi|332007162|gb|AED94545.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 608
Score = 333 bits (855), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 170/435 (39%), Positives = 257/435 (59%), Gaps = 25/435 (5%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y K+G L K+ + I+N+++W T+I QNGLAE L +N+ R VG PD+ TF
Sbjct: 179 YGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATF 238
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
++V+ SC ++ + Q IH ++ G S + + ++L+ +YS+ G L+DS F E
Sbjct: 239 LAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITS 298
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
D + W++M+AAY HG G +AI FE M + VTF LL ACSH GL E+G +
Sbjct: 299 PDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHY 358
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK 255
F+ M K+YR PRL+HY+C+VDLLGR G L +A LI+ MP++ ++ +W LL AC+ +K
Sbjct: 359 FETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYK 418
Query: 256 STDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWL 315
T + + AE + + P+D YV+LSNI++++ W+ S R M+++ + + G S++
Sbjct: 419 DTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYI 478
Query: 316 EIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLR-GYVPDTGADMHDMDSEEKEYNLK 374
E N++H+F +GD SHP S +I L+E+ +MK GY T +HD+ + KE +
Sbjct: 479 EHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSEMGYKSKTEFVLHDVGEDVKEEMIN 538
Query: 375 HHSEKLAIAFAEHTRGLIVMLPF-------------------KYISEIKNREIIVRDASR 415
HSEK+A+AF GL+V+ P K IS I+ R II+RD+ R
Sbjct: 539 QHSEKIAMAF-----GLLVVSPMEPIIIRKNLRICGDCHETAKAISLIEKRRIIIRDSKR 593
Query: 416 FHHFRNGKCSCGDYW 430
FHHF +G CSC DYW
Sbjct: 594 FHHFLDGSCSCSDYW 608
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 128/249 (51%), Gaps = 6/249 (2%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRM--V 66
G L Y++ G V EK+ MP R++++W +LI+G + G + + M + V
Sbjct: 69 GDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEV 128
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
GFRP+++TF+S+IS+C + +G+ IH V+K G +V V+++ I+ Y + G L S
Sbjct: 129 GFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSS 188
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHC 186
K F + ++V W++MI + +G E+ + F + E + TF+++L +C
Sbjct: 189 CKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDM 248
Query: 187 GLKEKGMEFFDL-MVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
G+ L M + + T ++DL + G L++++ + + +++ W
Sbjct: 249 GVVRLAQGIHGLIMFGGFSGNKCIT--TALLDLYSKLGRLEDSSTVFHEI-TSPDSMAWT 305
Query: 246 TLLSACKTH 254
+L+A TH
Sbjct: 306 AMLAAYATH 314
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 84/174 (48%), Gaps = 4/174 (2%)
Query: 77 SVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYS 136
S+I++ ++ + +H +VVK+ + + L+ Y R G + K F E
Sbjct: 36 SLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPER 95
Query: 137 DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE--FEANDVTFVSLLYACSHCGLKEKGME 194
D+V W+S+I+ Y G + + +M E F N+VTF+S++ AC + G KE+G
Sbjct: 96 DLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRC 155
Query: 195 FFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
L V K+ ++ ++ G+ G L + L ++ +K N + W T++
Sbjct: 156 IHGL-VMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIK-NLVSWNTMI 207
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 92/207 (44%), Gaps = 9/207 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF + ++L +Y K G L + V + + +AW ++A A +G D + +
Sbjct: 265 GFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHF 324
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV--ISSLISMYS 118
LM G PD +TF ++++CS + +G+ + E + +D + S ++ +
Sbjct: 325 ELMVHYGISPDHVTFTHLLNACSHSGLVEEGKH-YFETMSKRYRIDPRLDHYSCMVDLLG 383
Query: 119 RCGCLDDSVKTFLE--CEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM-EQKEFEANDVT 175
R G L D+ E E S V W +++ A + + E++ E + + +
Sbjct: 384 RSGLLQDAYGLIKEMPMEPSSGV-WGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYV 442
Query: 176 FVSLLYACSHCGLKEKGMEFFDLMVKK 202
+S +Y+ S GL + +LM +K
Sbjct: 443 MLSNIYSAS--GLWKDASRIRNLMKQK 467
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 333 bits (855), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 182/481 (37%), Positives = 275/481 (57%), Gaps = 56/481 (11%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQN---------- 50
GFE DL S+L MY K G L + + + RN+++W ++I G QN
Sbjct: 106 GFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALRVF 165
Query: 51 -GLAE-DVLDQYNLM-----------------RMVG---FRPDKITFVSVISSCSELATL 88
G+AE DV+ +++ RMV + +T +V+ +C+ +
Sbjct: 166 DGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQ 225
Query: 89 GQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAY 148
G+ IH +V+K G +V V +S+I MY +CG ++ + K F +V WS+M+A Y
Sbjct: 226 RLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGY 285
Query: 149 GFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPR 208
G HG +EA+ +F +M + N +TFVS+L ACSH GL E+G +F M ++ +P
Sbjct: 286 GMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPG 345
Query: 209 LEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL 268
+EHY C+VDLLGR GYL EA LI+ M ++ + ++W LL AC+ HK+ D+ A ++
Sbjct: 346 VEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLF 405
Query: 269 GVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGD 328
++P++ YVLLSNI+A A RW+ V R M+ + K PG S ++IK +VH F +GD
Sbjct: 406 ELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGRVHVFLVGD 465
Query: 329 KSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFAEHT 388
+ HP+ +I YLE+L+ +++ GYVPD + +HD+ EEKE L+ HSEKLA+AF
Sbjct: 466 REHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEKEMVLRVHSEKLAVAF---- 521
Query: 389 RGLIVMLP-------------------FKYISEIKNREIIVRDASRFHHFRNGKCSCGDY 429
G++ +P K+IS+I +REI+VRD+ RFHHFR+G CSCGDY
Sbjct: 522 -GIMNTVPGTTIHIIKNLRVCGDCHTAIKFISKIVDREIVVRDSKRFHHFRDGLCSCGDY 580
Query: 430 W 430
W
Sbjct: 581 W 581
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 139/311 (44%), Gaps = 38/311 (12%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
NV +W ++IA A++G + + L ++ MR + +P++ TF I SCS L L G+Q H
Sbjct: 40 NVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAH 99
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSM----------- 144
+ + G D+ V S+L+ MYS+CG L D+ F E + ++V W+SM
Sbjct: 100 QQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAH 159
Query: 145 --------------------IAAYGFHGKGEEAINLFEQM-EQKEFEANDVTFVSLLYAC 183
IA Y +G E++ +F +M + E N VT ++L AC
Sbjct: 160 RALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLAC 219
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
+H G + G D ++ K + + T ++D+ +CG ++ A M K N
Sbjct: 220 AHSGSQRLGKCIHDQVI-KMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREK-NVKS 277
Query: 244 WKTLLSACKTHKSTDMAGRIAEE--ILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
W +++ H A + E + GV P +L+ + +G F+
Sbjct: 278 WSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMS 337
Query: 302 RERNVKKEPGV 312
E +V EPGV
Sbjct: 338 HEFDV--EPGV 346
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 12/133 (9%)
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS-----HCGLKE 190
++V W+S+IA G EA+ F M + + N TF + +CS H G +
Sbjct: 39 TNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQA 98
Query: 191 KGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+ +P L + +VD+ +CG L +A L + + N + W ++++
Sbjct: 99 HQQALI------FGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHR-NIVSWTSMITG 151
Query: 251 CKTHKSTDMAGRI 263
+ A R+
Sbjct: 152 YVQNDDAHRALRV 164
>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g68930
gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 333 bits (854), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 169/449 (37%), Positives = 254/449 (56%), Gaps = 26/449 (5%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F+ + GS+L MY K L + V M +NV++W ++ G Q G AE+ + +
Sbjct: 301 FQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFL 360
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M+ G PD T IS+C+ +++L +G Q H + + +G V V +SL+++Y +CG
Sbjct: 361 DMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCG 420
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+DDS + F E D V W++M++AY G+ E I LF++M Q + + VT ++
Sbjct: 421 DIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVIS 480
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
ACS GL EKG +F LM +Y P + HY+C++DL R G L+EA I MP +A
Sbjct: 481 ACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDA 540
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
I W TLLSAC+ + ++ AE ++ ++P A Y LLS+I+AS +W V++ R M
Sbjct: 541 IGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGM 600
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
RE+NVKKEPG SW++ K ++H F+ D+S P +I LEEL +++ GY PDT
Sbjct: 601 REKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVH 660
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP--------------------FKYIS 401
HD++ K L +HSE+LAIAF ++ +P K+IS
Sbjct: 661 HDVEEAVKVKMLNYHSERLAIAFG------LIFVPSGQPIRVGKNLRVCVDCHNATKHIS 714
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+ REI+VRDA RFH F++G CSCGD+W
Sbjct: 715 SVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 138/284 (48%), Gaps = 40/284 (14%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVI---------------------- 38
GFE L+ GS L +MY G + + +KV + RN +
Sbjct: 169 GFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLF 228
Query: 39 --------AWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQ 90
+W +I G AQNGLA++ ++ + M++ G + D+ F SV+ +C L + +
Sbjct: 229 RGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINE 288
Query: 91 GQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGF 150
G+QIHA +++ + V S+LI MY +C CL + F + +VV W++M+ YG
Sbjct: 289 GKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQ 348
Query: 151 HGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLE 210
G+ EEA+ +F M++ + + T + AC++ E+G +F + L
Sbjct: 349 TGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITS-----GLI 403
Query: 211 HYTCV----VDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
HY V V L G+CG +D++ L M V+ +A+ W ++SA
Sbjct: 404 HYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR-DAVSWTAMVSA 446
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 120/275 (43%), Gaps = 33/275 (12%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN-LM 63
+L + ++L Y K+G + E E +P R+ + W LI G + +GL + YN +M
Sbjct: 71 NLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 130
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
R ++T ++++ S + G+QIH +V+K G + V S L+ MY+ GC+
Sbjct: 131 RDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCI 190
Query: 124 DDSVKTF------------------LECEY------------SDVVLWSSMIAAYGFHGK 153
D+ K F L C D V W++MI +G
Sbjct: 191 SDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGL 250
Query: 154 GEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYT 213
+EAI F +M+ + + + F S+L AC G +G + +++ + + +
Sbjct: 251 AKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRT-NFQDHIYVGS 309
Query: 214 CVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
++D+ +C L A + M K N + W ++
Sbjct: 310 ALIDMYCKCKCLHYAKTVFDRMKQK-NVVSWTAMV 343
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 333 bits (854), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 178/450 (39%), Positives = 267/450 (59%), Gaps = 26/450 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + ++ ++L +Y K G + K+ +N +AW T+I G Q G E L+ +
Sbjct: 337 GLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLF 396
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M + +P ++T+ SV+ + + L L G+QIH+ +K + D V +SLI MY++C
Sbjct: 397 SNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKC 456
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +DD+ TF + + D V W+++I Y HG G EA+NLF+ M+Q + N +TFV +L
Sbjct: 457 GRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVL 516
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACS+ GL +KG F M++ Y +P +EHYTC+V LLGR G DEA LI +P + +
Sbjct: 517 SACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPS 576
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
++W+ LL AC HK+ D+ A+ +L + PQD A +VLLSN++A+AKRW V+ R+
Sbjct: 577 VMVWRALLGACVIHKNLDLGKVCAQRVLEMEPQDDATHVLLSNMYATAKRWDNVAYVRKN 636
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+++ VKKEPG+SW+E + VH FT+GD SHP I LE L + + GYVPD
Sbjct: 637 MKKKKVKKEPGLSWVENQGVVHYFTVGDTSHPNIKLIFAMLEWLYKKTRDAGYVPDCSVV 696
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP--------------------FKYI 400
+ D++ +EKE L HSE+LA+AF ++ +P K +
Sbjct: 697 LLDVEDDEKERLLWMHSERLALAFG------LIQIPSGCSIRIIKNLRICVDCHAVIKLV 750
Query: 401 SEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
S+I REI++RD +RFHHFR G CSCGDYW
Sbjct: 751 SKIVQREIVIRDINRFHHFRQGVCSCGDYW 780
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 134/254 (52%), Gaps = 3/254 (1%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
++ DL G +L +Y KSG + E ++ MP ++I W +I+ AQ+ +++ L+ +
Sbjct: 236 YDRDLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFC 295
Query: 62 LMRMVGFR-PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
MR P+ TF SV+ +C+ L L G QIH+ V+K G +V V ++L+ +Y++C
Sbjct: 296 RMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKC 355
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +++SVK F + V W+++I Y G GE+A+NLF M + + +VT+ S+L
Sbjct: 356 GEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVL 415
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
A + E G + L +K K + + ++D+ +CG +D+A M K +
Sbjct: 416 RASASLVALEPGRQIHSLTIKTMYNKDSVVANS-LIDMYAKCGRIDDARLTFDKMD-KQD 473
Query: 241 AIIWKTLLSACKTH 254
+ W L+ H
Sbjct: 474 EVSWNALICGYSIH 487
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 131/274 (47%), Gaps = 3/274 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + D G++L Y G++ +V + +++++W ++A A+N ED L +
Sbjct: 134 GHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLF 193
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
MR++G+RP+ T + + SC+ L G+ +H +K D+ V +L+ +Y++
Sbjct: 194 CQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKS 253
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEA-NDVTFVSL 179
G + ++ + F E D++ WS MI+ Y K +EA+ LF +M Q N+ TF S+
Sbjct: 254 GEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASV 313
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L AC+ L G + V K + ++D+ +CG ++ + L K
Sbjct: 314 LQACASLVLLNLGNQIHSC-VLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEK- 371
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQ 273
N + W T++ + A + +LG++ Q
Sbjct: 372 NEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQ 405
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 114/250 (45%), Gaps = 4/250 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G LDL A + L + Y+ G L + K+ MP+ N ++++TL G +++ +
Sbjct: 33 GASLDLFAQNILLNTYVHFGFLEDASKLFDEMPLTNTVSFVTLAQGFSRSHQFQRARRLL 92
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ G+ ++ F +++ + +HA V K G D V ++LI YS C
Sbjct: 93 LRLFREGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQADAFVGTALIDAYSVC 152
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +D + + F + D+V W+ M+A Y + E+++ LF QM + N+ T + L
Sbjct: 153 GNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMGYRPNNFTISAAL 212
Query: 181 YACSHCGLKEKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
+C+ + G +K Y R L +++L + G + EA MP K
Sbjct: 213 KSCNGLEAFKVGKSVHGCALKVCYDRD--LYVGIALLELYTKSGEIAEAQQFFEEMP-KD 269
Query: 240 NAIIWKTLLS 249
+ I W ++S
Sbjct: 270 DLIPWSLMIS 279
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 75/167 (44%), Gaps = 15/167 (8%)
Query: 91 GQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGF 150
G+ +H ++K GASLD+ + L++ Y G L+D+ K F E ++ V + ++ +
Sbjct: 22 GKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEMPLTNTVSFVTLAQGFSR 81
Query: 151 HGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLE 210
+ + A L ++ ++ +E N F +LL M+ D + + +L
Sbjct: 82 SHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLV-------SMDLADTCLSVHAYVYKLG 134
Query: 211 HY------TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSAC 251
H T ++D CG +D A + + K + + W T + AC
Sbjct: 135 HQADAFVGTALIDAYSVCGNVDAARQVFDGIYFK-DMVSW-TGMVAC 179
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 165/440 (37%), Positives = 256/440 (58%), Gaps = 14/440 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+++ +S+ + G + K +P R+ ++W +I G + + L + M+
Sbjct: 273 DVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQ 332
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
M +PD+ T VS++++C+ L L G+ + + K D V ++LI MY +CG +
Sbjct: 333 MSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVG 392
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ K F E + D W++MI +G GEEA+ +F M + +++T++ +L AC+
Sbjct: 393 KAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDEITYIGVLCACT 452
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H G+ EKG FF M ++ KP + HY C+VDLLGR G L+EA +I NMPVK N+I+W
Sbjct: 453 HAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNSIVW 512
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
+LL AC+ HK+ +A A++IL + P++ A YVLL NI+A+ KRW+ + + R+ M ER
Sbjct: 513 GSLLGACRVHKNVQLAEMAAKQILELEPENGAVYVLLCNIYAACKRWENLRQVRKLMMER 572
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
+KK PG S +E+ V++F GD+SHP+S EI LE + ++ GY PDT D+
Sbjct: 573 GIKKTPGCSLMELNGNVYEFVAGDQSHPQSKEIYAKLENMMQDLIKAGYSPDTSEVFLDL 632
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPF--------------KYISEIKNREIIV 410
E+KE L HSEKLAIA+A + G + + K +SE NRE+IV
Sbjct: 633 GEEDKETALYRHSEKLAIAYALISSGPGITIRIVKNLRMCVDCHHMAKLVSEAYNRELIV 692
Query: 411 RDASRFHHFRNGKCSCGDYW 430
RD +RFHHFR+G CSC ++W
Sbjct: 693 RDKTRFHHFRHGSCSCNNFW 712
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 140/294 (47%), Gaps = 9/294 (3%)
Query: 18 KSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVS 77
+SG ++ +V +P + W T+I G ++ ++ + Y LM +PD+ TF
Sbjct: 53 ESGKMIYARQVFDAIPQPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPF 112
Query: 78 VISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSD 137
++ + L G+ + VK G ++ V + I M+S C +D + K F + +
Sbjct: 113 LLKGFTRNMALQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWE 172
Query: 138 VVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFD 197
VV W+ M++ Y + +++ LF +ME++ N VT V +L ACS E G +
Sbjct: 173 VVTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYK 232
Query: 198 LMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKS 256
+ R LE+ ++D+ CG +DEA ++ NM + + I W ++++
Sbjct: 233 YINGGIVERNLILEN--VLIDMFAACGEMDEAQSVFDNMKNR-DVISWTSIVTGFANIGQ 289
Query: 257 TDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRW-QGVSEFREAMRERNVKKE 309
D+A + ++I +D + + + + R+ + ++ FRE M+ NVK +
Sbjct: 290 IDLARKYFDQI---PERDYVSWTAMIDGYLRMNRFIEALALFRE-MQMSNVKPD 339
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 122/283 (43%), Gaps = 41/283 (14%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ +L + HM+ + KV + V+ W +++G + + +
Sbjct: 137 GFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLF 196
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G P+ +T V ++S+CS+L L G+ I+ + ++ + + LI M++ C
Sbjct: 197 IEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLIDMFAAC 256
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGE------------------------- 155
G +D++ F + DV+ W+S++ + G+ +
Sbjct: 257 GEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYL 316
Query: 156 ------EAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRL 209
EA+ LF +M+ + ++ T VS+L AC+H G E G VK Y K +
Sbjct: 317 RMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGE-----WVKTYIDKNSI 371
Query: 210 EHYTCV----VDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
++ T V +D+ +CG + +A + + M K + W ++
Sbjct: 372 KNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHK-DKFTWTAMI 413
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 162/440 (36%), Positives = 257/440 (58%), Gaps = 24/440 (5%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L +Y K + K+ P +++ +W +I+G QNGL ED + + M+ F
Sbjct: 358 TALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFS 417
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P+ +T ++S+C++L L G+ +H V + V ++LI MY++CG + ++ +
Sbjct: 418 PNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRL 477
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F + V W++MI+ YG HG G+EA+ +F +M VTF+ +LYACSH GL
Sbjct: 478 FDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLV 537
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
++G E F+ M+ +Y +P ++HY CVVD+LGR G+L A I MP++ +W+TLL
Sbjct: 538 KEGDEIFNSMIHRYGFEPSVKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLG 597
Query: 250 ACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKE 309
AC+ HK T++A ++E++ ++P + +VLLSNIH++ + + + R+ ++R + K
Sbjct: 598 ACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKA 657
Query: 310 PGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEK 369
PG + +EI H FT GD+SHP+ I LE+L +M+ GY P+T +HD++ EE+
Sbjct: 658 PGYTLIEIGETPHVFTSGDQSHPQVKAIHEKLEKLEGKMREAGYQPETELALHDVEEEER 717
Query: 370 EYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREIIV 410
E +K HSE+LAIAF GLI P K IS+I R I+V
Sbjct: 718 ELMVKVHSERLAIAF-----GLIATEPGTEIRIIKNLRVCLDCHTATKLISKITERVIVV 772
Query: 411 RDASRFHHFRNGKCSCGDYW 430
RDA+RFHHF++G CSCGDYW
Sbjct: 773 RDANRFHHFKDGVCSCGDYW 792
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 124/274 (45%), Gaps = 10/274 (3%)
Query: 15 MYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKIT 74
+Y K G + + R +++A+ +I G NG E L + + + G + T
Sbjct: 265 LYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSST 324
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
VS++ L + IH +K+ V ++L ++YS+ ++ + K F E
Sbjct: 325 LVSLVPVSGHLMLI---YAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESP 381
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGME 194
+ W++MI+ Y +G E+AI+LF +M+ EF N VT +L AC+ G G
Sbjct: 382 EKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKW 441
Query: 195 FFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
DL V+ + + T ++ + +CG + EA L MP K N + W T++S H
Sbjct: 442 VHDL-VRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMP-KKNEVTWNTMISGYGLH 499
Query: 255 KSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHA 286
A I E+L G+ P P L ++A
Sbjct: 500 GHGQEALTIFSEMLNSGIAP---TPVTFLCVLYA 530
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 98/189 (51%), Gaps = 1/189 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + +L+ GS++ MY K + + KV MP ++ I W T+I+G +N + + + +
Sbjct: 149 GCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVF 208
Query: 61 -NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+L+ R D T + ++ + +EL L G QIH+ K G V++ IS+YS+
Sbjct: 209 RDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSK 268
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG + + F E D+V +++MI Y +G+ E +++LF+++ + T VSL
Sbjct: 269 CGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSL 328
Query: 180 LYACSHCGL 188
+ H L
Sbjct: 329 VPVSGHLML 337
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 83/172 (48%), Gaps = 8/172 (4%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
FE + ++L MY K GS+ E ++ MP +N + W T+I+G +G ++ L ++
Sbjct: 451 FESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFS 510
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVV-KAGASLDVGVISSLISMYSRC 120
M G P +TF+ V+ +CS + +G +I ++ + G V + ++ + R
Sbjct: 511 EMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILGRA 570
Query: 121 GCLDDSVKTFLECE--YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFE 170
G L +++ F+E +W +++ A H + NL + +K FE
Sbjct: 571 GHLQRALQ-FIEAMPIQPGPSVWETLLGACRIH----KDTNLARTVSEKLFE 617
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/272 (19%), Positives = 115/272 (42%), Gaps = 8/272 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D+ + L G++ + + +V + L+ G + N L +
Sbjct: 47 GFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLAVF 106
Query: 61 -NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+L + +P+ T+ IS+ S G IH + + G ++ + S+++ MY +
Sbjct: 107 AHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHGQAIVDGCDSELLLGSNIVKMYFK 166
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEAND-VTFVS 178
++D+ K F D +LW++MI+ Y + E+I +F + + D T +
Sbjct: 167 FWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLD 226
Query: 179 LLYACSHCGLKEKGMEFFDLMVKK--YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
+L A + GM+ L K Y L T + L +CG + A+ L R
Sbjct: 227 ILPAVAELQELRLGMQIHSLATKTGCYSHDYVL---TGFISLYSKCGKIKMASTLFREFR 283
Query: 237 VKANAIIWKTLLSACKTHKSTDMAGRIAEEIL 268
+ + + + ++ ++ T+++ + +E++
Sbjct: 284 -RPDIVAYNAMIHGYTSNGETELSLSLFKELM 314
>gi|413947864|gb|AFW80513.1| hypothetical protein ZEAMMB73_142876 [Zea mays]
Length = 582
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 167/441 (37%), Positives = 256/441 (58%), Gaps = 25/441 (5%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L Y ++G L + + MP RN ++W ++ G Q G + L + M+ R
Sbjct: 147 NTLITAYARAGRLADARALFDEMPARNAVSWSAMVNGYVQAGDGREALRIFARMQAEDVR 206
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
PD V V+++C++ L QG+ +H + G +++ ++L+ MYS+CG + ++
Sbjct: 207 PDDTVLVGVLAACAQHGALEQGKWVHGYLKAHGIKINLFFGTALVDMYSKCGEVQLAMDV 266
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F +Y +V+ W++MI HG+G EA+ LF QME +D+ F+ +L AC+H GL
Sbjct: 267 FERMQYKNVLAWTTMIKGLAMHGRGSEAVMLFAQMESSGIRPDDIAFIGVLCACTHAGLV 326
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
+KG E FD MV+KY KP++EHY C+VDLL R G+L EA +I+ MP++ +A+IW L++
Sbjct: 327 DKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGFLYEAKEMIQKMPMEPDALIWGALMA 386
Query: 250 ACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKE 309
C+ HK+ + A +A+ + + P + YVLLSNI+A++ R E R MRE+ V K
Sbjct: 387 GCRFHKNVEFAEYVAKHWILLEPDKSGAYVLLSNIYAASGRHASAREIRHLMREKGVDKT 446
Query: 310 PGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKL-RGYVPDTGADMHDMDSEE 368
PG S +E+ +HQF +GD SHPR +I E+ + ++L GY+PD + D++ EE
Sbjct: 447 PGCSTVEVNGVIHQFIVGDLSHPRIKDILSKWYEIDTRIRLEEGYIPDMKEVLLDIEEEE 506
Query: 369 KEYNLKHHSEKLAIAFAEHTRGLIVM---LPF----------------KYISEIKNREII 409
KE L HSEKLAIAFA LI + +P K IS++ REI+
Sbjct: 507 KEGALSRHSEKLAIAFA-----LISISDNMPIRIFKNLRVCHDCHHVTKLISKVYGREIV 561
Query: 410 VRDASRFHHFRNGKCSCGDYW 430
VRD +RFH F+ G CSC DYW
Sbjct: 562 VRDRTRFHLFKEGTCSCKDYW 582
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 92/187 (49%), Gaps = 16/187 (8%)
Query: 98 VVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEA 157
+++ A++D ++LI+ Y+R G L D+ F E + V WS+M+ Y G G EA
Sbjct: 134 LLRTAAAVDASTFNTLITAYARAGRLADARALFDEMPARNAVSWSAMVNGYVQAGDGREA 193
Query: 158 INLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVD 217
+ +F +M+ ++ +D V +L AC+ G E+G ++ +K + K L T +VD
Sbjct: 194 LRIFARMQAEDVRPDDTVLVGVLAACAQHGALEQG-KWVHGYLKAHGIKINLFFGTALVD 252
Query: 218 LLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--------G 269
+ +CG + A + M K N + W T++ K M GR +E ++ G
Sbjct: 253 MYSKCGEVQLAMDVFERMQYK-NVLAWTTMI------KGLAMHGRGSEAVMLFAQMESSG 305
Query: 270 VNPQDAA 276
+ P D A
Sbjct: 306 IRPDDIA 312
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 79/159 (49%), Gaps = 2/159 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +++L G++L MY K G + V M +NV+AW T+I G A +G + + +
Sbjct: 239 GIKINLFFGTALVDMYSKCGEVQLAMDVFERMQYKNVLAWTTMIKGLAMHGRGSEAVMLF 298
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVV-KAGASLDVGVISSLISMYSR 119
M G RPD I F+ V+ +C+ + +G+++ +V K G + ++ + +R
Sbjct: 299 AQMESSGIRPDDIAFIGVLCACTHAGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLAR 358
Query: 120 CGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEA 157
G L ++ + + D ++W +++A FH E A
Sbjct: 359 NGFLYEAKEMIQKMPMEPDALIWGALMAGCRFHKNVEFA 397
>gi|356524120|ref|XP_003530680.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Glycine max]
Length = 616
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 174/447 (38%), Positives = 270/447 (60%), Gaps = 24/447 (5%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E DLV +++ + K G + K+ MP R+ + W +IAG AQ G + + LD ++L
Sbjct: 175 EPDLVTQTAMLNACAKCGDIDFARKMFDEMPERDHVTWNAMIAGYAQCGRSREALDVFHL 234
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M+M G + ++++ V V+S+C+ L L G+ +HA V + + V + ++L+ MY++CG
Sbjct: 235 MQMEGVKLNEVSMVLVLSACTHLQVLDHGRWVHAYVERYKVRMTVTLGTALVDMYAKCGN 294
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
+D +++ F + +V WSS I +G GEE+++LF M+++ + N +TF+S+L
Sbjct: 295 VDRAMQVFWGMKERNVYTWSSAIGGLAMNGFGEESLDLFNDMKREGVQPNGITFISVLKG 354
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
CS GL E+G + FD M Y P+LEHY +VD+ GR G L EA I +MP++ +
Sbjct: 355 CSVVGLVEEGRKHFDSMRNVYGIGPQLEHYGLMVDMYGRAGRLKEALNFINSMPMRPHVG 414
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMR 302
W LL AC+ +K+ ++ +I+ + ++ YVLLSNI+A K W+ VS R+ M+
Sbjct: 415 AWSALLHACRMYKNKELGEIAQRKIVELEDKNDGAYVLLSNIYADYKNWESVSSLRQTMK 474
Query: 303 ERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMH 362
+ VKK PG S +E+ +VH+F +GDKSHPR EI++ LEE++ ++L GYV +T +
Sbjct: 475 AKGVKKLPGCSVIEVDGEVHEFIVGDKSHPRYDEIEMKLEEISKCLRLSGYVANTNPVLF 534
Query: 363 DMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVM---LPF----------------KYISEI 403
D++ EEKE L HSEK+AIAF GLI + +P K IS+I
Sbjct: 535 DIEEEEKEDALSKHSEKVAIAF-----GLISLKGVVPIRVVMNLRICWDCHNVAKMISKI 589
Query: 404 KNREIIVRDASRFHHFRNGKCSCGDYW 430
NREIIVRD +RFHHF++G+CSC DYW
Sbjct: 590 FNREIIVRDRNRFHHFKDGECSCKDYW 616
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 106/239 (44%), Gaps = 39/239 (16%)
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL------ 123
PD TF ++ +C++L G +H V+K G LD V + L+ MY+ GCL
Sbjct: 110 PDNYTFTFLVRTCAQLQAHVTGLCVHGAVIKHGFELDPHVQTGLVFMYAELGCLSSCHNV 169
Query: 124 -------------------------DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAI 158
D + K F E D V W++MIA Y G+ EA+
Sbjct: 170 FDGAVEPDLVTQTAMLNACAKCGDIDFARKMFDEMPERDHVTWNAMIAGYAQCGRSREAL 229
Query: 159 NLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDL 218
++F M+ + + N+V+ V +L AC+H + + G + V++Y+ + + T +VD+
Sbjct: 230 DVFHLMQMEGVKLNEVSMVLVLSACTHLQVLDHG-RWVHAYVERYKVRMTVTLGTALVDM 288
Query: 219 LGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH----KSTDMAGRIAEEILGVNPQ 273
+CG +D A + M + N W + + + +S D+ + E GV P
Sbjct: 289 YAKCGNVDRAMQVFWGMKER-NVYTWSSAIGGLAMNGFGEESLDLFNDMKRE--GVQPN 344
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 162/440 (36%), Positives = 260/440 (59%), Gaps = 24/440 (5%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L +Y K + K+ P +++ +W +I+G QNGL ED + + M+ F
Sbjct: 358 TALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFS 417
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P+ +T ++S+C++L L G+ +H V + V ++LI MY++CG + ++ +
Sbjct: 418 PNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRL 477
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F + V W++MI+ YG HG+G+EA+N+F +M VTF+ +LYACSH GL
Sbjct: 478 FDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLV 537
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
++G E F+ M+ +Y +P ++HY C+VD+LGR G+L A I M ++ + +W+TLL
Sbjct: 538 KEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLG 597
Query: 250 ACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKE 309
AC+ HK T++A ++E++ ++P + +VLLSNIH++ + + + R+ ++R + K
Sbjct: 598 ACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKA 657
Query: 310 PGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEK 369
PG + +EI H FT GD+SHP+ EI LE+L +M+ GY P+T +HD++ EE+
Sbjct: 658 PGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEER 717
Query: 370 EYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREIIV 410
E +K HSE+LAIAF GLI P K IS+I R I+V
Sbjct: 718 ELMVKVHSERLAIAF-----GLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVV 772
Query: 411 RDASRFHHFRNGKCSCGDYW 430
RDA+RFHHF++G CSCGDYW
Sbjct: 773 RDANRFHHFKDGVCSCGDYW 792
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 126/274 (45%), Gaps = 10/274 (3%)
Query: 15 MYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKIT 74
+Y K G + G + R +++A+ +I G NG E L + + + G R T
Sbjct: 265 LYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSST 324
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
VS++ L + IH +K+ V ++L ++YS+ ++ + K F E
Sbjct: 325 LVSLVPVSGHLMLI---YAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESP 381
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGME 194
+ W++MI+ Y +G E+AI+LF +M++ EF N VT +L AC+ G G
Sbjct: 382 EKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKW 441
Query: 195 FFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
DL V+ + + T ++ + +CG + EA L ++ K N + W T++S H
Sbjct: 442 VHDL-VRSTDFESSIYVSTALIGMYAKCGSIAEARRLF-DLMTKKNEVTWNTMISGYGLH 499
Query: 255 KSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHA 286
A I E+L G+ P P L ++A
Sbjct: 500 GQGQEALNIFYEMLNSGITP---TPVTFLCVLYA 530
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 96/189 (50%), Gaps = 1/189 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + +L+ GS++ MY K + + KV MP ++ I W T+I+G +N + + + +
Sbjct: 149 GCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVF 208
Query: 61 -NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+L+ R D T + ++ + +EL L G QIH+ K G V++ IS+YS+
Sbjct: 209 RDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSK 268
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG + F E D+V +++MI Y +G+ E +++LF+++ T VSL
Sbjct: 269 CGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSL 328
Query: 180 LYACSHCGL 188
+ H L
Sbjct: 329 VPVSGHLML 337
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 84/172 (48%), Gaps = 8/172 (4%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
FE + ++L MY K GS+ E ++ LM +N + W T+I+G +G ++ L+ +
Sbjct: 451 FESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFY 510
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVV-KAGASLDVGVISSLISMYSRC 120
M G P +TF+ V+ +CS + +G +I ++ + G V + ++ + R
Sbjct: 511 EMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRA 570
Query: 121 GCLDDSVKTFLECEYSD--VVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFE 170
G L +++ F+E + +W +++ A H + NL + +K FE
Sbjct: 571 GHLQRALQ-FIEAMSIEPGSSVWETLLGACRIH----KDTNLARTVSEKLFE 617
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 116/272 (42%), Gaps = 8/272 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D+ + L G++ + + +V + L+ G + N L +
Sbjct: 47 GFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVF 106
Query: 61 -NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+L + +P+ T+ IS+ S G+ IH + V G ++ + S+++ MY +
Sbjct: 107 AHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFK 166
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEAND-VTFVS 178
++D+ K F D +LW++MI+ Y + E+I +F + + D T +
Sbjct: 167 FWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLD 226
Query: 179 LLYACSHCGLKEKGMEFFDLMVKK--YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
+L A + GM+ L K Y L T + L +CG + +AL R
Sbjct: 227 ILPAVAELQELRLGMQIHSLATKTGCYSHDYVL---TGFISLYSKCGKIKMGSALFREFR 283
Query: 237 VKANAIIWKTLLSACKTHKSTDMAGRIAEEIL 268
K + + + ++ ++ T+++ + +E++
Sbjct: 284 -KPDIVAYNAMIHGYTSNGETELSLSLFKELM 314
>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Glycine max]
Length = 820
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 167/437 (38%), Positives = 274/437 (62%), Gaps = 18/437 (4%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL-MRMVG 67
G+SL +MY +SG++ K ++ +N+I++ T A+ A D + +N + G
Sbjct: 387 GNSLINMYARSGTMECARKAFNILFEKNLISYNTAADANAK---ALDSDESFNHEVEHTG 443
Query: 68 FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV 127
T+ ++S + + T+ +G+QIHA +VK+G ++ + ++LISMYS+CG + ++
Sbjct: 444 VGASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAAL 503
Query: 128 KTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCG 187
+ F + Y +V+ W+S+I+ + HG +A+ LF +M + + N+VT++++L ACSH G
Sbjct: 504 QVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVG 563
Query: 188 LKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTL 247
L ++ + F+ M + PR+EHY C+VDLLGR G L EA I +MP A+A++W+T
Sbjct: 564 LIDEAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLLEAIEFINSMPFDADALVWRTF 623
Query: 248 LSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVK 307
L +C+ H++T + A++IL P D A Y+LLSN++AS RW V+ R++M+++ +
Sbjct: 624 LGSCRVHRNTKLGEHAAKKILEREPHDPATYILLSNLYASEGRWDDVAALRKSMKQKKLI 683
Query: 308 KEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSE 367
KE G SW+E+ NQVH+F +GD SHP++ +I L+EL ++K GY+P+T +HD++ E
Sbjct: 684 KETGYSWIEVDNQVHKFHVGDTSHPQARKIYDELDELALKIKNLGYIPNTDFVLHDVEDE 743
Query: 368 EKEYNLKHHSEKLAIAFAEHT----------RGLIVM----LPFKYISEIKNREIIVRDA 413
+KE L HSEK+A+A+A + + L V KYIS + REI+VRDA
Sbjct: 744 QKEQYLFQHSEKIAVAYALISTPKPKPIRVFKNLRVCGDCHTAIKYISIVTGREIVVRDA 803
Query: 414 SRFHHFRNGKCSCGDYW 430
+RFHH ++GKCSC DYW
Sbjct: 804 NRFHHIKDGKCSCNDYW 820
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 102/184 (55%), Gaps = 1/184 (0%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEK-VIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
F+ + G +L M+ K G ++ + V M +N++ W +I +Q GL +D +D +
Sbjct: 177 FDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLF 236
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ + + PDK T S++S+C EL G+Q+H+ V+++G + DV V +L+ MY++
Sbjct: 237 CRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKS 296
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
+++S K F + +V+ W+++I+ Y + +EAI LF M N TF S+L
Sbjct: 297 AAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVL 356
Query: 181 YACS 184
AC+
Sbjct: 357 KACA 360
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 131/284 (46%), Gaps = 6/284 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D+ G +L MY KS ++ K+ M NV++W LI+G Q+ ++ + +
Sbjct: 278 GLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLF 337
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M P+ TF SV+ +C+ L G G+Q+H + +K G S V +SLI+MY+R
Sbjct: 338 CNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARS 397
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ + K F +++ +++ A +E+ N ++E A+ T+ LL
Sbjct: 398 GTMECARKAFNILFEKNLISYNTAADANAKALDSDESFN--HEVEHTGVGASPFTYACLL 455
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
+ G KG + L+VK L ++ + +CG + A + +M + N
Sbjct: 456 SGAACIGTIVKGEQIHALIVKS-GFGTNLCINNALISMYSKCGNKEAALQVFNDMGYR-N 513
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLS 282
I W +++S H A + E+L GV P + +LS
Sbjct: 514 VITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLS 557
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 112/257 (43%), Gaps = 9/257 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMP--IRNVIAWITLIAGKAQNGLAEDVLD 58
G LD V +SL +Y K G + R M R++++W +I+ A N + L
Sbjct: 69 GLPLDSVLLNSLITLYSKCGDWENALSIFRNMGHHKRDLVSWSAIISCFANNSMESRALL 128
Query: 59 QYNLMRMVG---FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGA-SLDVGVISSLI 114
+ M P++ F +++ SCS G I A ++K G V V +LI
Sbjct: 129 TFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTGLAIFAFLLKTGYFDSHVCVGCALI 188
Query: 115 SMYSRCGCLDDSVK-TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEAND 173
M+++ G S + F + ++ ++V W+ MI Y G ++A++LF ++ E+ +
Sbjct: 189 DMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDK 248
Query: 174 VTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIR 233
T SLL AC G + +++ T +VD+ + ++ + +
Sbjct: 249 FTLTSLLSACVELEFFSLGKQLHSWVIRSGLASDVFVGCT-LVDMYAKSAAVENSRKIFN 307
Query: 234 NMPVKANAIIWKTLLSA 250
M + N + W L+S
Sbjct: 308 TM-LHHNVMSWTALISG 323
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 95/188 (50%), Gaps = 9/188 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF +L ++L MY K G+ +V M RNVI W ++I+G A++G A L+ +
Sbjct: 478 GFGTNLCINNALISMYSKCGNKEAALQVFNDMGYRNVITWTSIISGFAKHGFATKALELF 537
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV--ISSLISMYS 118
M +G +P+++T+++V+S+CS + + + + H + S+ + + ++ +
Sbjct: 538 YEMLEIGVKPNEVTYIAVLSACSHVGLIDEAWK-HFNSMHYNHSISPRMEHYACMVDLLG 596
Query: 119 RCGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGK---GEEAINLFEQMEQKEFEANDV 174
R G L ++++ + +D ++W + + + H GE A + +E++ +
Sbjct: 597 RSGLLLEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAK--KILEREPHDPATY 654
Query: 175 TFVSLLYA 182
+S LYA
Sbjct: 655 ILLSNLYA 662
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 78 VISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY-- 135
++ +C L G+ +H +++ +G LD +++SLI++YS+CG ++++ F +
Sbjct: 45 LLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGHHK 104
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE---FEANDVTFVSLLYACSHCGLKEKG 192
D+V WS++I+ + + A+ F M Q N+ F +LL +CS+ G
Sbjct: 105 RDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTG 164
Query: 193 MEFFDLMVKKYRRKPRLEHYTCV----VDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
+ F ++K + + CV +D+ + G ++A ++ + N + W ++
Sbjct: 165 LAIFAFLLK----TGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMI 220
Query: 249 S 249
+
Sbjct: 221 T 221
>gi|297740786|emb|CBI30968.3| unnamed protein product [Vitis vinifera]
Length = 1434
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 168/429 (39%), Positives = 260/429 (60%), Gaps = 14/429 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE + ++L HMY G K+ LM RN++ W ++I G A NG + L +
Sbjct: 25 GFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLF 84
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M + G PD T VS++S+C+EL L G++ H +VK G ++ ++L+ +Y++C
Sbjct: 85 REMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKC 144
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + K F E E VV W+S+I +G G+EA+ LF+++E+K +++TFV +L
Sbjct: 145 GSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVL 204
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
YACSHCG+ ++G ++F M ++Y P++EHY C+VDLLGR G + +A I+NMP++ N
Sbjct: 205 YACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPN 264
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A++W+TLL AC H + ++L + P+ + YVLLSN++AS +RW V + R
Sbjct: 265 AVVWRTLLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDVHKVRRT 324
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M VKK PG S +E++N++H+F MGD+SHP++ EI + L E+T +KL GYVP
Sbjct: 325 MLREGVKKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEITKLLKLEGYVPHISNV 384
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVM------------LPFKYISEIKNR 406
+ D++ EEKE L +HSEK+AIAF G+ + L K IS++ +R
Sbjct: 385 LADIEEEEKETALSYHSEKIAIAFMLINTAAGIPIRVVKNLRVCADCHLAIKLISKVFDR 444
Query: 407 EIIVRDASR 415
EI+VRD SR
Sbjct: 445 EIVVRDRSR 453
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 2/166 (1%)
Query: 83 SELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWS 142
++L + +G+++H+ ++ G V V ++L+ MY+ CG + + K F ++V W+
Sbjct: 6 AKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWN 65
Query: 143 SMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKK 202
S+I Y +G+ EA+ LF +M + E + T VSLL AC+ G G MV K
Sbjct: 66 SVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMV-K 124
Query: 203 YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
L ++DL +CG + +A + M K+ + W +L+
Sbjct: 125 VGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKS-VVSWTSLI 169
>gi|357486999|ref|XP_003613787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515122|gb|AES96745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 173/450 (38%), Positives = 258/450 (57%), Gaps = 25/450 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G ++ +L +MY G + +V + V+A+ +I A+N A + L +
Sbjct: 142 GVSDNMYVVPTLINMYTACGDIDASRRVFDKIDEPCVVAYNAIIMSLARNNRANEALALF 201
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
++ +G +P +T + V+SSC+ L +L G+ +H V K G V V ++LI MY++C
Sbjct: 202 RELQEIGLKPTDVTMLVVLSSCALLGSLDLGRWMHEYVKKYGFDRYVKVNTTLIDMYAKC 261
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G LDD+V F + D WS++I AY HG G +AI++ +M++++ + +++TF+ +L
Sbjct: 262 GSLDDAVNVFRDMPKRDTQAWSAIIVAYATHGDGFQAISMLNEMKKEKVQPDEITFLGIL 321
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
YACSH GL E+G E+F M +Y P ++HY C+VDLLGR G LDEA I +P+K
Sbjct: 322 YACSHNGLVEEGFEYFHGMTNEYGIVPSIKHYGCMVDLLGRAGRLDEAYKFIDELPIKPT 381
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
I+W+TLLSAC TH + +M R+ E I ++ YV+ SN+ A +W V+ R+
Sbjct: 382 PILWRTLLSACSTHGNVEMGKRVIERIFELDDSHGGDYVIFSNLCARYGKWDDVNHLRKT 441
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M ++ K PG S +E+ N VH+F G+ H S + L+EL E+K GYVPDT
Sbjct: 442 MIDKGAVKIPGCSSIEVNNVVHEFFAGEGVHSTSTTLHRALDELVKELKSAGYVPDTSLV 501
Query: 361 MH-DMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYI 400
+ DM+ EEKE L++HSEKLAI F GL+ P K+I
Sbjct: 502 FYADMEDEEKEIILRYHSEKLAITF-----GLLNTPPGTTIRVVKNLRVCGDCHNAAKFI 556
Query: 401 SEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
S I R+II+RD RFHHF++GKCSCGDYW
Sbjct: 557 SLIFGRQIILRDVQRFHHFKDGKCSCGDYW 586
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 116/234 (49%), Gaps = 15/234 (6%)
Query: 34 IRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRP---------DKITFVSVISSC-- 82
I I + T KA A + DQ +V F D + ++ C
Sbjct: 61 ITKFINFCTSNPTKASMEHAHQLFDQITQPNIVLFNTMARGYARLNDPLRMITHFRRCLR 120
Query: 83 --SELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVL 140
S++ L +G+Q+H VK G S ++ V+ +LI+MY+ CG +D S + F + + VV
Sbjct: 121 LVSKVKALAEGKQLHCFAVKLGVSDNMYVVPTLINMYTACGDIDASRRVFDKIDEPCVVA 180
Query: 141 WSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMV 200
++++I + + + EA+ LF ++++ + DVT + +L +C+ G + G + V
Sbjct: 181 YNAIIMSLARNNRANEALALFRELQEIGLKPTDVTMLVVLSSCALLGSLDLG-RWMHEYV 239
Query: 201 KKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
KKY ++ T ++D+ +CG LD+A + R+MP K + W ++ A TH
Sbjct: 240 KKYGFDRYVKVNTTLIDMYAKCGSLDDAVNVFRDMP-KRDTQAWSAIIVAYATH 292
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 168/444 (37%), Positives = 262/444 (59%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E+D G SL +Y+ G + M ++ ++W +I+G +QNGL ED L +
Sbjct: 367 GLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILF 426
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ GF+P I VSV+ +CS+ + L G++ H +KA DV V S I MY++
Sbjct: 427 RKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKS 486
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
GC+ +S F + D+ W+++IAAYG HG GEE+I LFE+M + + TF+ +L
Sbjct: 487 GCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGIL 546
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
CSH GL E+G+++F+ M + +P+LEHY CV+D+LGR G LD+A L+ MP + +
Sbjct: 547 TVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQPD 606
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+ +W +LLS C+ ++ +AE++L + P++ YV LSN++A + RW V R+
Sbjct: 607 SRVWSSLLSFCRNFGELEIGQIVAEKLLELEPKNVENYVSLSNLYAGSGRWDDVRRVRQM 666
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
+++ ++K+ G SW+E+ +VH F GD P+S E+ + +L +M GY P+T A
Sbjct: 667 IKDIGLQKDAGCSWIELGGKVHSFVAGDNLLPQSKEMSMTWRKLEKKMCKIGYKPNTSAV 726
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNR 406
+HD+D E+K L+ HSEKLAI F T+G + + K++SE+ R
Sbjct: 727 LHDVDEEKKIEKLRGHSEKLAICFGLLNTTKGTTLRIFKNLRICVDCHNASKFMSEVTGR 786
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EII+RD RFHHF++G CSCGDYW
Sbjct: 787 EIIIRDNKRFHHFKDGLCSCGDYW 810
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 108/188 (57%), Gaps = 7/188 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G LD+ G++L MY K G + KV MP+RN+++W ++I+G ++NG ++D D
Sbjct: 61 GLLLDVFVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDM- 119
Query: 61 NLMRMV----GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISM 116
L+ M+ G PD T V+V+ C+ + G +IH VK G S DV V +SL+ M
Sbjct: 120 -LVEMMAGEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDM 178
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQME-QKEFEANDVT 175
YS+CG L ++ F + + V W++MI G EA NLF +M+ Q++ E N+VT
Sbjct: 179 YSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVT 238
Query: 176 FVSLLYAC 183
+++L AC
Sbjct: 239 VLNILPAC 246
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 120/254 (47%), Gaps = 2/254 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ D + + Y K G L+ E+V M + V +W LI G AQNG L+ Y
Sbjct: 266 GFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLY 325
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G PD T S++ + + L +L G+++H V++ G +D + SL+S+Y C
Sbjct: 326 IQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHC 385
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + F E V W++MI+ Y +G E+A+ LF ++ F+ +D+ VS+L
Sbjct: 386 GESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVL 445
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACS G E +K + + +D+ + G + E+ ++ + K
Sbjct: 446 GACSQQSALRLGKETHCYALKALLMEDVFVACS-TIDMYAKSGCIKESRSVFDGLKNKDL 504
Query: 241 AIIWKTLLSACKTH 254
A W +++A H
Sbjct: 505 A-SWNAIIAAYGVH 517
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 106/209 (50%), Gaps = 7/209 (3%)
Query: 49 QNGLAEDVLDQY-NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDV 107
+N L D +D + L+ F D TF VI +C+ G G+ IH V+K G LDV
Sbjct: 7 RNELYSDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDV 66
Query: 108 GVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAIN-LFEQMEQ 166
V ++LI+MY + G +D +VK F ++V W+S+I+ + +G ++ + L E M
Sbjct: 67 FVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAG 126
Query: 167 KEFEANDV-TFVSLLYACSHCGLKEKGMEFFDLMVK-KYRRKPRLEHYTCVVDLLGRCGY 224
+E D+ T V++L C+ + G+ L VK R+ + +VD+ +CGY
Sbjct: 127 EEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNN--SLVDMYSKCGY 184
Query: 225 LDEAAALIRNMPVKANAIIWKTLLSACKT 253
L EA L + + NA+ W T++ T
Sbjct: 185 LTEAQMLF-DKNNRKNAVSWNTMIGGLCT 212
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 129/289 (44%), Gaps = 15/289 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D+ +SL MY K G L E + + +N ++W T+I G G + + +
Sbjct: 164 GLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGY---IFEAF 220
Query: 61 NLMRMVGFRPD----KITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISM 116
NL R + + D ++T ++++ +C E++ L +++H ++ G D V + ++
Sbjct: 221 NLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAA 280
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
Y++CG L + + F E V W+++I +G +A+NL+ QM + T
Sbjct: 281 YAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTI 340
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV--VDLLGRCGYLDEAAALIRN 234
SLL A +H G E ++ R ++ + + + L CG A L
Sbjct: 341 GSLLLASAHLKSLRYGKEVHGFVL---RHGLEIDSFIGISLLSLYIHCGESSSARLLFDG 397
Query: 235 MPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLL 281
M K+ ++ W ++S + + A + +++ G P D A +L
Sbjct: 398 MEEKS-SVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVL 445
>gi|359476124|ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
gi|296082021|emb|CBI21026.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 168/445 (37%), Positives = 263/445 (59%), Gaps = 15/445 (3%)
Query: 1 GFELDLVAGSSLAHMYMK-SGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQ 59
GF+ D+ +++ HMY SG + K+ MP + + W +I G A+ G + +
Sbjct: 139 GFDDDIFVQNTMVHMYCCCSGGMEFARKLFDEMPKLDPVTWTAMIGGYARLGQSAGAVGL 198
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ M++ G PD +T VSV+S+C++L L G+ I + + K V + ++L+ M+++
Sbjct: 199 FRKMQIAGVCPDDVTMVSVLSACTDLGALELGKWIESYIEKERVLKTVELSNALVDMFAK 258
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG +D ++ F +V W+S+I HG+G EA++LFE+M+ D+ F+ L
Sbjct: 259 CGDVDKALGLFRNMSKRTIVSWTSVIVGLAMHGRGLEAVSLFEEMKASGMVPEDIAFIGL 318
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L ACSH GL E+G ++F M +++ P++EHY C+VDLL R G + EA + MP++
Sbjct: 319 LSACSHSGLVERGRQYFSEMTRQFGIVPKIEHYGCMVDLLSRAGLVTEALEFVERMPIEP 378
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
N IIW+TL+SAC+ H + I+++++ P + YVLLSNI+ W+ S+ R
Sbjct: 379 NPIIWRTLISACRVHGELKLGESISKQLIRNEPMHESNYVLLSNIYGKMLDWEKKSKIRV 438
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
AM ++ ++K PG + +E+ N++H+F +GD+SH + EI + E+ EMK GY P T
Sbjct: 439 AMGKKGIQKVPGSTMIELDNEIHEFIVGDRSHNQYNEIIKMVNEMGREMKRAGYAPTTTE 498
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFA----------EHTRGLIVM----LPFKYISEIKN 405
D+D E+KE L HSEKLAIAFA T+ L V K+IS+I N
Sbjct: 499 VFLDIDEEDKEDALSRHSEKLAIAFALLNTPPGSPIRITKNLRVCGDCHSASKFISKIYN 558
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
REI++RD SRFHHFR+G+CSCGD+W
Sbjct: 559 REIVMRDRSRFHHFRDGQCSCGDFW 583
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 124/247 (50%), Gaps = 5/247 (2%)
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
YNLM G P+K F V+ +C+ L L G+ +H +VK G D+ V ++++ MY
Sbjct: 97 YNLMLGYGISPNKYAFPFVLKACAGLRDLNLGKAVHGSLVKFGFDDDIFVQNTMVHMYCC 156
Query: 120 C-GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
C G ++ + K F E D V W++MI Y G+ A+ LF +M+ +DVT VS
Sbjct: 157 CSGGMEFARKLFDEMPKLDPVTWTAMIGGYARLGQSAGAVGLFRKMQIAGVCPDDVTMVS 216
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+L AC+ G E G ++ + ++K R +E +VD+ +CG +D+A L RNM K
Sbjct: 217 VLSACTDLGALELG-KWIESYIEKERVLKTVELSNALVDMFAKCGDVDKALGLFRNMS-K 274
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLSNIHASAKRWQGVSE 296
+ W +++ H A + EE+ G+ P+D A LLS S +G
Sbjct: 275 RTIVSWTSVIVGLAMHGRGLEAVSLFEEMKASGMVPEDIAFIGLLSACSHSGLVERGRQY 334
Query: 297 FREAMRE 303
F E R+
Sbjct: 335 FSEMTRQ 341
>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 167/413 (40%), Positives = 250/413 (60%), Gaps = 14/413 (3%)
Query: 32 MPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQG 91
MP +NV +W ++I+G Q G + +D + + RP+++T VSV+++C++L L G
Sbjct: 102 MPNKNVRSWTSMISGFVQCGKPNEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLG 161
Query: 92 QQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFH 151
+ +H K+G +V V ++LI MY +CGCL+++ + F E E VV WS+MIA H
Sbjct: 162 RIVHEYSTKSGFKRNVHVCNTLIDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMH 221
Query: 152 GKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEH 211
G+ EEA+ LF +M + + N VTF+ LL+ACSH GL ++G FF M Y P++EH
Sbjct: 222 GQAEEALCLFSEMIKLGVKPNGVTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEH 281
Query: 212 YTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVN 271
Y CVVDL R G L+EA I +MP+K N ++W LL CK HK+ D+A + + ++
Sbjct: 282 YGCVVDLFSRAGLLEEAHEFILSMPIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELD 341
Query: 272 PQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSH 331
P + YV++SNI+A A+RW+ + R+ M++R VKK G S + + VH+F GD++H
Sbjct: 342 PLNDGYYVVISNIYAEAERWEDAARVRKLMKDRGVKKTSGWSSITVNGVVHEFVAGDQTH 401
Query: 332 PRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFAEHT--R 389
P++ +I ++L +MK RGY P T + DM+ +EKE L HSEKLA+ F T
Sbjct: 402 PQAEDICKIWDKLLVKMKRRGYAPKTSVVLLDMEEKEKEKFLYRHSEKLAVVFGLMTTPE 461
Query: 390 GLIVML------------PFKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
G + + K IS I +REIIVRD +RFH FR+G+CSC D+W
Sbjct: 462 GTPIRIMKNLRVCEDCHAALKIISGIVSREIIVRDRNRFHCFRDGQCSCRDFW 514
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 110/248 (44%), Gaps = 43/248 (17%)
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
MR+ PD T V+ +C +L+ + G+ IH K G ++ + + ++++Y CG
Sbjct: 1 MRLFDVLPDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGE 60
Query: 123 LDDSVKTFLECEYSDVVLWSSMIA----------AYGFH--------------------- 151
+ D++ F + D V W+ +IA AYGF
Sbjct: 61 MGDAMLLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQC 120
Query: 152 GKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEH 211
GK EAI+LF ++E + N+VT VS+L AC+ G + G +V +Y K +
Sbjct: 121 GKPNEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGR-----IVHEYSTKSGFKR 175
Query: 212 --YTC--VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEI 267
+ C ++D+ +CG L+ A + M + + W +++ H + A + E+
Sbjct: 176 NVHVCNTLIDMYVKCGCLENARRVFYEMEER-TVVSWSAMIAGLAMHGQAEEALCLFSEM 234
Query: 268 --LGVNPQ 273
LGV P
Sbjct: 235 IKLGVKPN 242
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 91/175 (52%), Gaps = 15/175 (8%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ ++ ++L MY+K G L +V M R V++W +IAG A +G AE+ L +
Sbjct: 172 GFKRNVHVCNTLIDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLF 231
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSL------I 114
+ M +G +P+ +TF+ ++ +CS + + +G++ A + + D GVI + +
Sbjct: 232 SEMIKLGVKPNGVTFIGLLHACSHMGLIDEGRRFFASM-----TADYGVIPQIEHYGCVV 286
Query: 115 SMYSRCGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGK---GEEAINLFEQME 165
++SR G L+++ + L + V+W +++ H EEAI +++
Sbjct: 287 DLFSRAGLLEEAHEFILSMPIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELD 341
>gi|357116278|ref|XP_003559909.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 585
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 169/440 (38%), Positives = 262/440 (59%), Gaps = 14/440 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
DLV+ +++ H Y G + ++ R+ +W ++I+ A+ +++ L+ + MR
Sbjct: 146 DLVSWNTMIHGYAVRGDVGMAREIFDGTRDRDAFSWSSMISAYAKGRCSKEALELWREMR 205
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+ G PD I+ VSV+S+CS + L G ++H V +D+ + ++L+ MY++CG ++
Sbjct: 206 VAGVAPDCISMVSVLSACSAMGALAIGAEVHRFVESNRVEVDMKLGTALVDMYAKCGDIE 265
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+S+K F DV+ WSSMI HG G +A++LF +M + + N++TF+ +L AC+
Sbjct: 266 NSLKVFHAMPVKDVLTWSSMIIGLANHGLGHDALSLFSEMISQGLQPNEITFIGVLIACT 325
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL G ++F M + PR+EHY C+VDLLGR G+++EA LIR+M K + IIW
Sbjct: 326 HVGLVNDGKKYFSSMSDVHGVVPRMEHYGCMVDLLGRAGHVEEAMELIRSMTFKPDPIIW 385
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
+TLL AC+ HK+ ++A ++ ++P YVLLSNI+A A W+GV+E R+ +R
Sbjct: 386 RTLLGACRIHKNVEIAEEAMAKLKVLDPLADGHYVLLSNIYAQANSWEGVAEMRKTIRRE 445
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
N+++ PG S +E +N VH+F GD+SHPR EI LEE+ ++ GY P T + D+
Sbjct: 446 NIQRVPGRSSIEWENTVHEFVSGDRSHPRIEEIYKMLEEMMDRLRQAGYRPMTSLVLQDI 505
Query: 365 DSEEKEYNLKHHSEKLAIAF------AEHTRGLIVML--------PFKYISEIKNREIIV 410
D + K+ L HSEKLAIAF A T + L K IS +R++IV
Sbjct: 506 DEQSKKRALAEHSEKLAIAFGLLVTPARSTLRITKNLRACEDCHSAIKLISLAYDRKLIV 565
Query: 411 RDASRFHHFRNGKCSCGDYW 430
RD +RFHHF G+CSC DYW
Sbjct: 566 RDRNRFHHFSEGQCSCKDYW 585
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 82/157 (52%), Gaps = 2/157 (1%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E+D+ G++L MY K G + KV MP+++V+ W ++I G A +GL D L ++
Sbjct: 245 EVDMKLGTALVDMYAKCGDIENSLKVFHAMPVKDVLTWSSMIIGLANHGLGHDALSLFSE 304
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSRCG 121
M G +P++ITF+ V+ +C+ + + G++ + + G + ++ + R G
Sbjct: 305 MISQGLQPNEITFIGVLIACTHVGLVNDGKKYFSSMSDVHGVVPRMEHYGCMVDLLGRAG 364
Query: 122 CLDDSVKTFLECEYS-DVVLWSSMIAAYGFHGKGEEA 157
++++++ + D ++W +++ A H E A
Sbjct: 365 HVEEAMELIRSMTFKPDPIIWRTLLGACRIHKNVEIA 401
>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
Length = 815
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 167/441 (37%), Positives = 264/441 (59%), Gaps = 16/441 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D +SL MY K G E +++ + R+ + W +I+ Q GL E+ L + MR
Sbjct: 376 DFRVSNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMR 435
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
D+ TF V+ + + LA++ G+Q+H+ V+++G ++V +L+ MY+ C +
Sbjct: 436 RANVSADQATFACVLKASANLASILLGKQLHSCVIRSGF-MNVYSGCALLDMYANCASIK 494
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D++KTF E +VV W+++++AY +G G+ + FE+M ++ + V+F+ +L ACS
Sbjct: 495 DAIKTFEEMSERNVVTWNALLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCILTACS 554
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
HC L E+G+++F+ M Y P+ EHYT +VD L R G DEA L+ MP + + I+W
Sbjct: 555 HCRLVEEGLKYFNDMSGVYNLAPKREHYTAMVDALCRSGRFDEAEKLMGQMPFEPDEIVW 614
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNP-QDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
++L++C+ HK+ +A + A ++ + +DAAPYV +SNI A A +W V + ++AMR+
Sbjct: 615 TSVLNSCRIHKNYALARKAAGQLFNMKVLRDAAPYVTMSNIFAEAGQWDSVVKVKKAMRD 674
Query: 304 RNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHD 363
R V+K P SW+EIK++VH F+ D HP+ +EI +E L +M+ GY PD +
Sbjct: 675 RGVRKLPAYSWVEIKHKVHVFSANDDKHPQQLEILRKIEMLAEQMEKEGYDPDISCAHQN 734
Query: 364 MDSEEKEYNLKHHSEKLAIAFA----EHTRGLIVM----------LPFKYISEIKNREII 409
+D E K +LK+HSE+LAIAFA ++VM K IS+I REI
Sbjct: 735 VDKESKIDSLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKVISKIVGREIT 794
Query: 410 VRDASRFHHFRNGKCSCGDYW 430
VRD++RFHHFR+G CSCGDYW
Sbjct: 795 VRDSNRFHHFRDGSCSCGDYW 815
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 125/250 (50%), Gaps = 2/250 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G L+ ++L Y K+G L ++ M + +++ +I G A NGL E+ ++ +
Sbjct: 170 GHHLNHRVCNTLLDSYFKTGGLDSARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIELF 229
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ +GF+P TF +VIS+ L GQQIH VVK +V V ++ + YS+
Sbjct: 230 VEMQNLGFKPSDFTFAAVISASVGLDDTAFGQQIHGFVVKTSFIRNVFVGNAFLDFYSKH 289
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
C+++ K F E D V ++ +I AY + GK +E+I+LF++++ F+ + F ++L
Sbjct: 290 DCVNEVRKLFNEMPELDGVSYNVIITAYAWVGKVKESIDLFQELQFTTFDRKNFPFPTML 349
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
+ + G + +V P +VD+ +CG +EA + + ++
Sbjct: 350 SIAASSLDLQMGRQLHAQVVVSM-ADPDFRVSNSLVDMYAKCGKFEEADRIFLRLSSRS- 407
Query: 241 AIIWKTLLSA 250
+ W ++SA
Sbjct: 408 TVPWTAMISA 417
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 98/181 (54%), Gaps = 5/181 (2%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F +D++ Y+KSG+L ++ R V+AW T+I +++ D +
Sbjct: 75 FSIDIIISG-----YVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFA 129
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M G +PD +T++++++ C++L + Q HA++VK G L+ V ++L+ Y + G
Sbjct: 130 EMHRSGSQPDYVTYITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTG 189
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
LD + + FLE D V ++ MI Y +G EEAI LF +M+ F+ +D TF +++
Sbjct: 190 GLDSARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVIS 249
Query: 182 A 182
A
Sbjct: 250 A 250
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 116/251 (46%), Gaps = 7/251 (2%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F ++ G++ Y K + E K+ MP + +++ +I A G ++ +D +
Sbjct: 272 FIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAWVGKVKESIDLFQ 331
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
++ F F +++S + L G+Q+HA+VV + A D V +SL+ MY++CG
Sbjct: 332 ELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFRVSNSLVDMYAKCG 391
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+++ + FL V W++MI+A G E + LF +M + A+ TF +L
Sbjct: 392 KFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRANVSADQATFACVLK 451
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYT--CVVDLLGRCGYLDEAAALIRNMPVKA 239
A ++ G + ++ R + Y+ ++D+ C + +A M +
Sbjct: 452 ASANLASILLGKQLHSCVI----RSGFMNVYSGCALLDMYANCASIKDAIKTFEEMSER- 506
Query: 240 NAIIWKTLLSA 250
N + W LLSA
Sbjct: 507 NVVTWNALLSA 517
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 77/153 (50%), Gaps = 3/153 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF +++ +G +L MY S+ + K M RNV+ W L++ AQNG + L +
Sbjct: 473 GF-MNVYSGCALLDMYANCASIKDAIKTFEEMSERNVVTWNALLSAYAQNGDGKGTLKSF 531
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSR 119
M M G++PD ++F+ ++++CS + +G + ++ + ++++ R
Sbjct: 532 EEMIMSGYQPDSVSFLCILTACSHCRLVEEGLKYFNDMSGVYNLAPKREHYTAMVDALCR 591
Query: 120 CGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFH 151
G D++ K + + D ++W+S++ + H
Sbjct: 592 SGRFDEAEKLMGQMPFEPDEIVWTSVLNSCRIH 624
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 78/173 (45%), Gaps = 11/173 (6%)
Query: 66 VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGA-SLDVGVISSLISMYSRCGCLD 124
GF P F +I SE L Q +Q+ ++ + S+D+ +IS Y + G L
Sbjct: 37 TGFDPITSRFNFMIKDLSERGQLCQARQLLDQMPNRNSFSIDI-----IISGYVKSGNLT 91
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ + F + + VV W++MI AY + +A LF +M + + + VT+++LL C+
Sbjct: 92 VARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPDYVTYITLLTGCN 151
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTC--VVDLLGRCGYLDEAAALIRNM 235
E E + + + L H C ++D + G LD A L M
Sbjct: 152 DL---EVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLEM 201
>gi|225468727|ref|XP_002271484.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 558
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 166/445 (37%), Positives = 260/445 (58%), Gaps = 15/445 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ D+ + L H Y G L KV MP R++++W ++IA A+NG + L +
Sbjct: 114 GFDSDVYVQNGLIHFYGCCGFLDFALKVFEEMPERDLVSWSSMIACFAKNGFGYEALALF 173
Query: 61 NLMRMVG-FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
M++VG +PD++ +SV+S+ S L L G+ I + + G V + ++L+ M+SR
Sbjct: 174 QRMQLVGTVKPDEVIVLSVVSAISILGDLELGKWIRGFISRNGLEFTVSLGTALVDMFSR 233
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CGC+++S++ F E +V+ W+++I HG+ EA+ +F +M F+ + VTF +
Sbjct: 234 CGCIEESMRVFDEMGERNVLTWTALINGLAVHGRSAEALRMFYEMRNHGFQPDHVTFTGV 293
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L ACSH GL +G F+ + +Y +P EHY C+VDLLGR G L+EA + MP++
Sbjct: 294 LVACSHGGLVSEGWHVFESIRNEYGMEPLPEHYGCMVDLLGRAGLLNEACKFVDGMPIRP 353
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
N+IIW+TLL AC H ++A ++ E+I ++ YVLLSN++ RW + R
Sbjct: 354 NSIIWRTLLGACVNHNYIELAEKVKEKINELDSYHDGDYVLLSNVYGGVGRWAEKAGVRN 413
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
+MRE+ + K+PG S + + + +H+F GD +HP+ I +L + +K+ GY PD
Sbjct: 414 SMREKRISKKPGCSLINVNHLIHEFVAGDNNHPQFESIREFLVSMIDSLKVVGYTPDISN 473
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFA----EHTRGLIVMLPF----------KYISEIKN 405
+ D++ EEKE L +HSEKLA+AFA + +R + VM KY S++
Sbjct: 474 VLFDIEEEEKESTLGYHSEKLAVAFALLCFKDSRTIRVMKNLRICHDCHCFMKYASDVFE 533
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
REII+RD +RFHHF G CSC DYW
Sbjct: 534 REIIIRDRNRFHHFSKGSCSCRDYW 558
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 121/253 (47%), Gaps = 15/253 (5%)
Query: 20 GSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVI 79
SL + L+ + A+ T+I A + + + M M G PD TF V+
Sbjct: 36 ASLSYARSIFDLIAFPDTFAFNTIIRAHADSSPSFSLSLFSK-MAMAGVSPDHFTFPFVL 94
Query: 80 SSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVV 139
+C+ L T G +H+ + K G DV V + LI Y CG LD ++K F E D+V
Sbjct: 95 KACARLQT---GLDLHSLLFKLGFDSDVYVQNGLIHFYGCCGFLDFALKVFEEMPERDLV 151
Query: 140 LWSSMIAAYGFHGKGEEAINLFEQMEQ-KEFEANDVTFVSLLYACSHCGLKEKGMEFFDL 198
WSSMIA + +G G EA+ LF++M+ + ++V +S++ A S G E G
Sbjct: 152 SWSSMIACFAKNGFGYEALALFQRMQLVGTVKPDEVIVLSVVSAISILGDLELGK----- 206
Query: 199 MVKKYRRKPRLEHY----TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
++ + + LE T +VD+ RCG ++E+ + M + N + W L++ H
Sbjct: 207 WIRGFISRNGLEFTVSLGTALVDMFSRCGCIEESMRVFDEMGER-NVLTWTALINGLAVH 265
Query: 255 KSTDMAGRIAEEI 267
+ A R+ E+
Sbjct: 266 GRSAEALRMFYEM 278
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 171/449 (38%), Positives = 264/449 (58%), Gaps = 24/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G ++ G+SL MY K G++ + V MP +++++W +I G A NGL ++ +D +
Sbjct: 243 GMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLF 302
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ +PD T V V+S+C+ L L G+ + V + + + ++LI +Y++C
Sbjct: 303 LQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKC 362
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + + F + D V+W+++I+ +G + + LF Q+E+ + + TF+ LL
Sbjct: 363 GSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLL 422
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
C+H GL ++G +F+ M + + P +EHY C+VDLLGR G LDEA LIRNMP++AN
Sbjct: 423 CGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEAN 482
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
AI+W LL AC+ H+ T +A ++++ + P ++ YVLLSNI+++ +W ++ R +
Sbjct: 483 AIVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAKVRLS 542
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M E+ ++K PG SW+E+ VH+F +GDK HP S +I L+ELT +MK+ GYVP T
Sbjct: 543 MNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIYAKLDELTKKMKVAGYVPTTDFV 602
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
+ D++ EEKE+ L HSEKLAIAF GLI P K IS
Sbjct: 603 LFDIEEEEKEHFLGCHSEKLAIAF-----GLISATPTAVIRVVKNLRVCGDCHMAIKLIS 657
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
I REI VRD +RFH FR G CSC DYW
Sbjct: 658 SITGREITVRDNNRFHCFREGSCSCNDYW 686
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 147/278 (52%), Gaps = 12/278 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ D+ +SL +Y K G L + KV +P +NV++W +I+G G + +D +
Sbjct: 142 GFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMF 201
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ + PD T V V+S+C++L L G+ IH +++ G +V V +SL+ MY++C
Sbjct: 202 RRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKC 261
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ + F D+V W +MI Y +G +EAI+LF QM+++ + + T V +L
Sbjct: 262 GNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVL 321
Query: 181 YACSHCGLKEKGMEFFDLMVKK--YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
AC+ G E G E+ +V + + P L T ++DL +CG + A + + M K
Sbjct: 322 SACARLGALELG-EWVSGLVDRNEFLYNPVLG--TALIDLYAKCGSMSRAWEVFKGMKEK 378
Query: 239 ANAIIWKTLLSACKTHK----STDMAGRIAEEILGVNP 272
+ ++W ++S + S + G++ E LG+ P
Sbjct: 379 -DRVVWNAIISGLAMNGYVKISFGLFGQV--EKLGIKP 413
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 115/215 (53%), Gaps = 2/215 (0%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
N+ W T+I G N +D ++ Y LMR GF P+ TF V+ +C+ L L G +IH
Sbjct: 76 NIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIH 135
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGE 155
VVK G DV V +SL+ +Y++CG L+D+ K F + +VV W+++I+ Y GK
Sbjct: 136 TLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFR 195
Query: 156 EAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV 215
EAI++F ++ + + T V +L AC+ G G E+ + + + T +
Sbjct: 196 EAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSG-EWIHKCIMEMGMVRNVFVGTSL 254
Query: 216 VDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
VD+ +CG +++A ++ MP K + + W ++
Sbjct: 255 VDMYAKCGNMEKARSVFDGMPEK-DIVSWGAMIQG 288
>gi|449442178|ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
gi|449529652|ref|XP_004171812.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 606
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 171/450 (38%), Positives = 265/450 (58%), Gaps = 25/450 (5%)
Query: 1 GFELDLVAGSSLAHMY-MKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQ 59
GF+ D+ +++ HMY +G + KV MP + + W +I G A+ G + + +
Sbjct: 162 GFDCDIHVQNTMVHMYSCCAGGINSARKVFDEMPKSDSVTWSAMIGGYARVGRSTEAVAL 221
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ M+M PD+IT VS++S+C++L L G+ I A + + V V ++LI M+++
Sbjct: 222 FREMQMAEVCPDEITMVSMLSACTDLGALELGKWIEAYIERHEIHKPVEVSNALIDMFAK 281
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG + ++K F +V W+S+I HG+G+EA LFE+M +DV F+ L
Sbjct: 282 CGDISKALKLFRAMNEKTIVSWTSVIVGMAMHGRGQEATCLFEEMTSSGVAPDDVAFIGL 341
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L ACSH GL E+G E+F M+KKY+ P++EHY C+VD+ R G + EA +RNMP++
Sbjct: 342 LSACSHSGLVERGREYFGSMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVRNMPIEP 401
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
N +I +TL+SAC+ H + +I + ++ P + YVLLSNI+A W+ ++ RE
Sbjct: 402 NPVILRTLVSACRGHGEFKLGEKITKLLMKHEPLHESNYVLLSNIYAKTLSWEKKTKIRE 461
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M + +KK PG + +EI N++++F GDKSH + EI ++E+ EMK GY P T
Sbjct: 462 VMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQHKEIYEMVDEMGREMKKSGYRPSTSE 521
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYI 400
+ D++ E+KE +L HSEKLAIAF GL+ P K+I
Sbjct: 522 VLLDINEEDKEDSLNRHSEKLAIAF-----GLLRTPPGTPIRIVKNLRVCSDCHSASKFI 576
Query: 401 SEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
S+I +REII+RD +RFHHF++G+CSCGD+W
Sbjct: 577 SKIYDREIIMRDRNRFHHFKSGQCSCGDFW 606
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 134/266 (50%), Gaps = 6/266 (2%)
Query: 42 TLIAGKAQNGLAED-VLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVK 100
TLI AQ G ++D L Y +M P+K T+ V+ +C+ L L GQ +H VVK
Sbjct: 101 TLIRAYAQTGHSKDKALALYGIMLHDAILPNKFTYPFVLKACAGLEVLNLGQTVHGSVVK 160
Query: 101 AGASLDVGVISSLISMYSRC-GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAIN 159
G D+ V ++++ MYS C G ++ + K F E SD V WS+MI Y G+ EA+
Sbjct: 161 FGFDCDIHVQNTMVHMYSCCAGGINSARKVFDEMPKSDSVTWSAMIGGYARVGRSTEAVA 220
Query: 160 LFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLL 219
LF +M+ E +++T VS+L AC+ G E G ++ + ++++ +E ++D+
Sbjct: 221 LFREMQMAEVCPDEITMVSMLSACTDLGALELG-KWIEAYIERHEIHKPVEVSNALIDMF 279
Query: 220 GRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAP 277
+CG + +A L R M K + W +++ H A + EE+ GV P D A
Sbjct: 280 AKCGDISKALKLFRAMNEK-TIVSWTSVIVGMAMHGRGQEATCLFEEMTSSGVAPDDVAF 338
Query: 278 YVLLSNIHASAKRWQGVSEFREAMRE 303
LLS S +G F M++
Sbjct: 339 IGLLSACSHSGLVERGREYFGSMMKK 364
>gi|356519586|ref|XP_003528453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Glycine max]
Length = 582
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 177/445 (39%), Positives = 266/445 (59%), Gaps = 15/445 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ + ++L Y KS + KV MP R++IAW ++I+G QNGLA + ++ +
Sbjct: 138 GYASNSFVQAALVTFYAKSCTPRVARKVFDEMPQRSIIAWNSMISGYEQNGLASEAVEVF 197
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
N MR G PD TFVSV+S+CS+L +L G +H +V G ++V + +SL++M+SRC
Sbjct: 198 NKMRESGGEPDSATFVSVLSACSQLGSLDLGCWLHECIVGTGIRMNVVLATSLVNMFSRC 257
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + F +VV W++MI+ YG HG G EA+ +F +M+ N VT+V++L
Sbjct: 258 GDVGRARAVFDSMNEGNVVSWTAMISGYGMHGYGVEAMEVFHRMKACGVVPNRVTYVAVL 317
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA- 239
AC+H GL +G F M ++Y P +EH+ C+VD+ GR G L+EA +R + +
Sbjct: 318 SACAHAGLINEGRLVFASMKQEYGVVPGVEHHVCMVDMFGRGGLLNEAYQFVRGLSSEEL 377
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
+W +L ACK HK+ D+ +AE ++ P++ YVLLSN++A A R V R
Sbjct: 378 VPAVWTAMLGACKMHKNFDLGVEVAENLISAEPENPGHYVLLSNMYALAGRMDRVESVRN 437
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M +R +KK+ G S ++++N+ + F+MGDKSHP + EI YL+EL K GY P +
Sbjct: 438 VMIQRGLKKQVGYSTIDVENRSYLFSMGDKSHPETNEIYCYLDELMWRCKDAGYAPAPES 497
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKN 405
MH+++ EE+EY L++HSEKLA+AF + G+ + + K+IS + N
Sbjct: 498 AMHELEEEEREYALRYHSEKLAVAFGLMKTCHGVTLRIVKNLRICEDCHSAIKFISVVMN 557
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
REIIVRD RFHHFR G CSC DYW
Sbjct: 558 REIIVRDKLRFHHFREGSCSCSDYW 582
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 115/236 (48%), Gaps = 2/236 (0%)
Query: 19 SGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSV 78
+GS+ ++ R + + + +LI + G + D + Y M P TF SV
Sbjct: 55 AGSIAYTRRLFRSVSDPDSFLFNSLIKASSNFGFSLDAVFFYRRMLHSRIVPSTYTFTSV 114
Query: 79 ISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDV 138
I +C++L+ L G +H+ V +G + + V ++L++ Y++ + K F E +
Sbjct: 115 IKACADLSLLRLGTIVHSHVFVSGYASNSFVQAALVTFYAKSCTPRVARKVFDEMPQRSI 174
Query: 139 VLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDL 198
+ W+SMI+ Y +G EA+ +F +M + E + TFVS+L ACS G + G +
Sbjct: 175 IAWNSMISGYEQNGLASEAVEVFNKMRESGGEPDSATFVSVLSACSQLGSLDLGCWLHEC 234
Query: 199 MVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
+V R + T +V++ RCG + A A+ +M + N + W ++S H
Sbjct: 235 IVGTGIRM-NVVLATSLVNMFSRCGDVGRARAVFDSMN-EGNVVSWTAMISGYGMH 288
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 54/124 (43%), Gaps = 3/124 (2%)
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
R + +V+S+ L L QQ HA +V G +++ L+++ G + + +
Sbjct: 7 RRKSAEYEAVVSAGPHLRRL---QQAHAHLVVTGCHRSRALLTKLLTLSCAAGSIAYTRR 63
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F D L++S+I A G +A+ + +M + TF S++ AC+ L
Sbjct: 64 LFRSVSDPDSFLFNSLIKASSNFGFSLDAVFFYRRMLHSRIVPSTYTFTSVIKACADLSL 123
Query: 189 KEKG 192
G
Sbjct: 124 LRLG 127
>gi|297735590|emb|CBI18084.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 175/426 (41%), Positives = 249/426 (58%), Gaps = 36/426 (8%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
N+ W T+I G N +D ++ Y LMR GF P+ TF V+ +C+ L L G +IH
Sbjct: 76 NIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIH 135
Query: 96 AEVVK---------AGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIA 146
VVK G +V V +SL+ MY++CG ++ + F D+V W +MI
Sbjct: 136 TLVVKEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQ 195
Query: 147 AYGFHGKGEEAINLFEQMEQKE---FEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKY 203
Y +G +EAI+LF QM+++ + + TF+ LL C+H GL ++G +F+ M + +
Sbjct: 196 GYALNGLPKEAIDLFLQMQRENKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFF 255
Query: 204 RRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRI 263
P +EHY C+VDLLGR G LDEA LIRNMP++ANAI+W LL AC+ H+ T +A
Sbjct: 256 SLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELA 315
Query: 264 AEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQ 323
++++ + P ++ YVLLSNI+++ +W ++ R +M E+ ++K PG SW+E+ VH+
Sbjct: 316 LKQLIELEPWNSGNYVLLSNIYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHE 375
Query: 324 FTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIA 383
F +GDK HP S +I L+ELT +MK+ GYVP T + D++ EEKE+ L HSEKLAIA
Sbjct: 376 FLVGDKYHPLSEKIYAKLDELTKKMKVAGYVPTTDFVLFDIEEEEKEHFLGCHSEKLAIA 435
Query: 384 FAEHTRGLIVMLP-------------------FKYISEIKNREIIVRDASRFHHFRNGKC 424
F GLI P K IS I REI VRD +RFH FR G C
Sbjct: 436 F-----GLISATPTAVIRVVKNLRVCGDCHMAIKLISSITGREITVRDNNRFHCFREGSC 490
Query: 425 SCGDYW 430
SC DYW
Sbjct: 491 SCNDYW 496
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 94/188 (50%), Gaps = 6/188 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G ++ G+SL MY K G++ + V MP +++++W +I G A NGL ++ +D +
Sbjct: 151 GMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLF 210
Query: 61 NLMRM---VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVK-AGASLDVGVISSLISM 116
M+ +G +PD TF+ ++ C+ + +G++ + + + + ++ +
Sbjct: 211 LQMQRENKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDL 270
Query: 117 YSRCGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEA-INLFEQMEQKEFEANDV 174
R G LD++ + ++ ++W +++ A H + A + L + +E + + + +
Sbjct: 271 LGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNY 330
Query: 175 TFVSLLYA 182
+S +Y+
Sbjct: 331 VLLSNIYS 338
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 171/449 (38%), Positives = 263/449 (58%), Gaps = 26/449 (5%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E D+ + + + Y K G V MP++ + AW LI+ QNG ++ L +N
Sbjct: 290 ERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNE 349
Query: 63 MRMVGF-RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
+++ +PD++T VS +S+C++L + G IH + + G L+ +ISSL+ MY++CG
Sbjct: 350 LQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCG 409
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
L+ +++ F E DV +WS+MIA G HG+G+ AI+LF +M++ + + N VTF ++L
Sbjct: 410 SLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLC 469
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
ACSH GL ++G FF M Y P ++HY C+VD+LGR G+L+EA LI M +A
Sbjct: 470 ACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACMVDILGRAGFLEEAMELINEMSTTPSA 529
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
+W LL AC H + ++ ++++L + P++ VLLSNI+A RW+ VSE R+ M
Sbjct: 530 SVWGALLGACSLHMNVELGELASDQLLKLEPRNHGAIVLLSNIYAKTGRWEKVSELRKLM 589
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
R+ +KKEPG S +E VH+F +GD +HP S I LEE+ +++K GY P+ +
Sbjct: 590 RDTELKKEPGCSSIEANGNVHEFLVGDNTHPLSSNIYSKLEEIATKLKSVGYEPNKSHLL 649
Query: 362 HDMDSEE-KEYNLKHHSEKLAIAFAEHTRGLIVMLPFKYISEIKN--------------- 405
++ ++ KE L HSEKLAIAF GL+ + P + I +KN
Sbjct: 650 QLIEEDDLKEQALSLHSEKLAIAF-----GLVTLAPSQPIRVVKNLRICGDCHAFAKLVS 704
Query: 406 ----REIIVRDASRFHHFRNGKCSCGDYW 430
R+I++RD RFHHFR+G CSC DYW
Sbjct: 705 RVYDRDILLRDRYRFHHFRDGHCSCMDYW 733
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 138/285 (48%), Gaps = 34/285 (11%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F +DL +SL Y G L E++ + + ++V++W ++I+ AQ ED L+ +
Sbjct: 157 FGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFL 216
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M P+ +T V V+S+C++ L G+ + + + + G +D+ + ++++ MY++CG
Sbjct: 217 KMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCG 276
Query: 122 CLDDSVKTFLECEYSDVVLWSSM-------------------------------IAAYGF 150
+DD+ K F E DV W+ M I+AY
Sbjct: 277 SVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQ 336
Query: 151 HGKGEEAINLFEQME-QKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRL 209
+GK +EA+ +F +++ K + ++VT VS L AC+ G + G + + +K+
Sbjct: 337 NGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLG-GWIHVYIKREGIVLNC 395
Query: 210 EHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
+ +VD+ +CG L++A + ++ + + +W +++ H
Sbjct: 396 HLISSLVDMYAKCGSLEKALEVFYSVEER-DVYVWSAMIAGLGMH 439
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 134/288 (46%), Gaps = 23/288 (7%)
Query: 32 MPIRNVIAWITLIAGKAQNG-------LAEDVLDQYNLMRMVGFRPDKITFVSVISSCSE 84
+P N+ W TLI A + + D+LD+ + P+K TF VI + SE
Sbjct: 85 IPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDL------PNKFTFPFVIKAASE 138
Query: 85 LATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSM 144
L G +H +K +D+ +++SL+ Y CG L + + F DVV W+SM
Sbjct: 139 LKASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSM 198
Query: 145 IAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYR 204
I+A+ E+A+ LF +ME++ N VT V +L AC+ K+ +EF +
Sbjct: 199 ISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACA----KKLDLEFGRWVCSYIE 254
Query: 205 RKP-RLEHYTC--VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAG 261
RK +++ C ++D+ +CG +D+A L MP + + W +L D A
Sbjct: 255 RKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPER-DVFSWTIMLDGYAKMGDYD-AA 312
Query: 262 RIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKE 309
R+ + V + AA VL+S + K + ++ F E + K +
Sbjct: 313 RLVFNAMPVK-EIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPD 359
>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
Length = 1038
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 168/444 (37%), Positives = 260/444 (58%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE D +SL MY K G L + + + R++I W ++A A +G E+VL
Sbjct: 595 GFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRSIITWNAILAANAHHGHGEEVLKLV 654
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ MR G D+ +F +S+ ++LA L +GQQ+H VK G LD + ++ MYS+C
Sbjct: 655 SKMRSFGLSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFELDCFIFNAAADMYSKC 714
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + VK + W+ +I+A G HG EE F +M + + VTFVSLL
Sbjct: 715 GEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCETFHEMLEMGIKPGHVTFVSLL 774
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL ++G+ ++D++ K + +P +EH CV+DLLGR G L EA I MP+K N
Sbjct: 775 TACSHGGLVDQGLAYYDMIAKDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPN 834
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
++W++LL++CK H+ D + AE + + P+D + +VL SN+ A+ RW+ V R+
Sbjct: 835 DLVWRSLLASCKIHRDLDRGRKAAENLSKLEPEDDSVFVLSSNMFATTGRWEDVENVRKQ 894
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M +N+KK+ SW+++K++V F +GD++HP++MEI LE++ +K GYV DT
Sbjct: 895 MGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQA 954
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNR 406
+ D D E+KE+NL +HSE+LA+A+A G V + +K++S + R
Sbjct: 955 LQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGR 1014
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
I++RD RFHHF +G CSC DYW
Sbjct: 1015 RIVLRDQYRFHHFESGLCSCKDYW 1038
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 147/311 (47%), Gaps = 11/311 (3%)
Query: 7 VAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV 66
+ G++L MY K G + +V+ MP R+V+AW LI G A+N + L + +R+
Sbjct: 499 IIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVE 558
Query: 67 GFRPDKITFVSVISSCSELATL-GQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD 125
G + IT VSV+S+C L +G+ +HA +V AG D V +SLI+MY++CG L
Sbjct: 559 GVSANYITVVSVLSACLVPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSS 618
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
S F + ++ W++++AA HG GEE + L +M + +F L A +
Sbjct: 619 SQDLFNGLDNRSIITWNAILAANAHHGHGEEVLKLVSKMRSFGLSLDQFSFSEGLSAAAK 678
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII-- 243
+ E+G + L V K + + D+ +CG + E +++ +P N +
Sbjct: 679 LAVLEEGQQLHGLAV-KLGFELDCFIFNAAADMYSKCGEIGE---VVKMLPPSVNRSLPS 734
Query: 244 WKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
W L+SA H + E+L G+ P LL+ QG++ + M
Sbjct: 735 WNILISALGRHGYFEEVCETFHEMLEMGIKPGHVTFVSLLTACSHGGLVDQGLAYYD--M 792
Query: 302 RERNVKKEPGV 312
++ EP +
Sbjct: 793 IAKDFGLEPAI 803
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 125/254 (49%), Gaps = 10/254 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D+ +++ H+Y G + KV MP RNV++W +L+ G + G E+V+D Y
Sbjct: 190 GLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIY 249
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
MR G ++ + VISSC L G+QI +V+K+G + V +SLISM+
Sbjct: 250 KSMRGEGVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNM 309
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +D + F + D + W+S++AAY +G EE+ +F M + E N T +LL
Sbjct: 310 GNVDYANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLL 369
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGR----CGYLDEAAALIRNMP 236
++ G L+VK + CV + L R G +EA + + MP
Sbjct: 370 SVLGDVDHQKWGRGIHGLVVKM-----GFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMP 424
Query: 237 VKANAIIWKTLLSA 250
K + I W +L+++
Sbjct: 425 TK-DLISWNSLMAS 437
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 131/261 (50%), Gaps = 3/261 (1%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
L ++ ++L +MY K G + + MP+RN ++W T+++G + GL + ++ + M
Sbjct: 91 LSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVRVGLYLEGMEFFQKM 150
Query: 64 RMVGFRPDKITFVSVISSCSELATL-GQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
+G +P S++++C ++ +G Q+H V K+G DV V ++++ +Y G
Sbjct: 151 CDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGL 210
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
+ S K F E +VV W+S++ Y G+ EE I++++ M + E N+ + ++ +
Sbjct: 211 VSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEGVECNENSMSLVISS 270
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
C + G + ++K + +L ++ + G G +D A I N + + I
Sbjct: 271 CGLLKDESLGRQIIGQVIKS-GLESKLAVENSLISMFGNMGNVD-YANYIFNQISERDTI 328
Query: 243 IWKTLLSACKTHKSTDMAGRI 263
W ++++A + + + RI
Sbjct: 329 SWNSIVAAYAQNGHIEESSRI 349
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 124/256 (48%), Gaps = 5/256 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ + ++L MY +G E + V + MP +++I+W +L+A +G + D L
Sbjct: 392 GFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGIL 451
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G + +TF S +++C +G+ +H VV +G + + ++L+SMY +
Sbjct: 452 CSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKI 511
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + S + L+ DVV W+++I Y + ++A+ F+ + + AN +T VS+L
Sbjct: 512 GGMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSANYITVVSVL 571
Query: 181 YACSHCG-LKEKGMEFFDLMVKKYRRKPRLEHY-TCVVDLLGRCGYLDEAAALIRNMPVK 238
AC G L E+G +V EH ++ + +CG L + L + +
Sbjct: 572 SACLVPGDLLERGKPLHAYIVSAGFESD--EHVKNSLITMYAKCGDLSSSQDLFNGLDNR 629
Query: 239 ANAIIWKTLLSACKTH 254
+ I W +L+A H
Sbjct: 630 S-IITWNAILAANAHH 644
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 121/260 (46%), Gaps = 2/260 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E L +SL M+ G++ + + R+ I+W +++A AQNG E+ +
Sbjct: 291 GLESKLAVENSLISMFGNMGNVDYANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIF 350
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
NLMR + T +++S ++ G+ IH VVK G V V ++L+ MY+
Sbjct: 351 NLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGA 410
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +++ F + D++ W+S++A++ G+ +A+ + M + N VTF S L
Sbjct: 411 GRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSAL 470
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC +KG L+V ++ +V + G+ G + + ++ MP + +
Sbjct: 471 AACFSPEFFDKGRILHGLVVVSGLFDNQIIG-NALVSMYGKIGGMSTSRRVLLQMP-RRD 528
Query: 241 AIIWKTLLSACKTHKSTDMA 260
+ W L+ ++ D A
Sbjct: 529 VVAWNALIGGYAENEDPDKA 548
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 75/167 (44%), Gaps = 3/167 (1%)
Query: 83 SELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWS 142
S++ G+ +HA VK L V ++LI+MY++ G + + F + + V W+
Sbjct: 69 SQITRETTGRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWN 128
Query: 143 SMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCG-LKEKGMEFFDLMVK 201
+M++ G E + F++M + + SL+ AC G + +G++ V
Sbjct: 129 TMMSGIVRVGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGF-VA 187
Query: 202 KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
K + T ++ L G G + + + MP + N + W +L+
Sbjct: 188 KSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDR-NVVSWTSLM 233
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 181/448 (40%), Positives = 259/448 (57%), Gaps = 27/448 (6%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
FE DL+ SL MY K G ++ M I NV+ W +I+G A+NG + + +
Sbjct: 303 FEPDLLI--SLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQ 360
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M R D IT S I +C+++ +L + + + K DV V ++LI M+++CG
Sbjct: 361 EMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCG 420
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+D + + F DVV+WS+MI YG HG+G++AI+LF M+Q NDVTFV LL
Sbjct: 421 SVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLT 480
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
AC+H GL E+G E F M K Y + R +HY CVVDLLGR G+L+EA I MP++
Sbjct: 481 ACNHSGLVEEGWELFHSM-KYYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGV 539
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
+W LL ACK ++ + AE++ ++P + YV LSN++AS++ W V++ R M
Sbjct: 540 SVWGALLGACKIYRHVTLGEYAAEQLFSLDPFNTGHYVQLSNLYASSRLWDSVAKVRILM 599
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
RE+ + K+ G S +EI ++ F +GDKSHPR EI LE L +K G++P + +
Sbjct: 600 REKGLSKDLGYSLIEINGKLQAFRVGDKSHPRFKEIFEELESLERRLKEAGFIPHIESVL 659
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISE 402
HD++ EEKE L +HSE+LAIA+ GLI P K IS+
Sbjct: 660 HDLNQEEKEETLCNHSERLAIAY-----GLISTAPGTTLRITKNLRACINCHSATKLISK 714
Query: 403 IKNREIIVRDASRFHHFRNGKCSCGDYW 430
+ NREI+VRDA+RFHHF+NG CSC DYW
Sbjct: 715 LVNREIVVRDANRFHHFKNGVCSCRDYW 742
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 143/284 (50%), Gaps = 4/284 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE D+ + L +Y K G + + V + RN+++W ++I+G QNGL + L +
Sbjct: 199 GFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIF 258
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
MR +PD I VSV+ + +++ L QG+ IH VVK G + ++ SL +MY++C
Sbjct: 259 GQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKC 318
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + F + E +V++W++MI+ Y +G EA+ LF++M K + +T S +
Sbjct: 319 GQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAI 378
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+ G + D + K R + T ++D+ +CG +D A + + + +
Sbjct: 379 LACAQVGSLDLAKWMGDYINKTEYRNDVFVN-TALIDMFAKCGSVDLAREVF-DRTLDKD 436
Query: 241 AIIWKTLLSACKTHKSTDMAGRI--AEEILGVNPQDAAPYVLLS 282
++W ++ H A + A + GV P D LL+
Sbjct: 437 VVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLT 480
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 125/253 (49%), Gaps = 4/253 (1%)
Query: 20 GSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVI 79
G + KV P +V W +I G + + D ++ Y+ M+ G PD T V+
Sbjct: 117 GEIGYARKVFDEFPEPSVFLWNAIIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVL 176
Query: 80 SSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVV 139
+CS + L G+++H ++ + G DV V + L+++Y++CG ++ + F + ++V
Sbjct: 177 KACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIV 236
Query: 140 LWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLM 199
W+SMI+ YG +G EA+ +F QM Q+ + + + VS+L A + E+G +
Sbjct: 237 SWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCV 296
Query: 200 VK-KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTD 258
VK +P L + + +CG + A + M + N ++W ++S + T+
Sbjct: 297 VKMGLEFEPDL--LISLTAMYAKCGQVMVARSFFDQMEI-PNVMMWNAMISGYAKNGYTN 353
Query: 259 MAGRIAEEILGVN 271
A + +E++ N
Sbjct: 354 EAVGLFQEMISKN 366
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 71/159 (44%), Gaps = 2/159 (1%)
Query: 92 QQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFH 151
QIHA++V +G +++ ++ G + + K F E V LW+++I Y H
Sbjct: 88 NQIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSH 147
Query: 152 GKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEH 211
+AI ++ +M+ + T +L ACS + E G + + + +
Sbjct: 148 NFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHG-QIFRLGFESDVFV 206
Query: 212 YTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+V L +CG +++A + + + N + W +++S
Sbjct: 207 QNGLVALYAKCGRVEQARIVFEGLDDR-NIVSWTSMISG 244
>gi|302781198|ref|XP_002972373.1| hypothetical protein SELMODRAFT_97177 [Selaginella moellendorffii]
gi|300159840|gb|EFJ26459.1| hypothetical protein SELMODRAFT_97177 [Selaginella moellendorffii]
Length = 485
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 175/446 (39%), Positives = 263/446 (58%), Gaps = 16/446 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMP-IRNVIAWITLIAGKAQNGLAEDVLDQ 59
GF+ D ++L Y K SL + +KV R M V++W LI G Q G +
Sbjct: 40 GFQADDHVKNTLMDFYTKCDSLDDVKKVFRSMGGDAKVVSWTCLIVGCVQLGSYREAFHF 99
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGA-SLDVGVISSLISMYS 118
+ LM + G D +T+ S++ +CS LA+L QG+++HA + + G DV + +S+++MYS
Sbjct: 100 FKLMELQGIHADTVTYASLLDACSNLASLSQGRKLHARIAELGLLEADVVLQTSILTMYS 159
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+CG L ++ F ++V WS++I AY +G A+ LF +MEQ +A++ TFVS
Sbjct: 160 KCGRLGEARGIFDRIGEKNIVAWSAIIIAYAQNGDCSTALKLFWKMEQAGQKASETTFVS 219
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+LYACSH GL + +F M + + +P HY C+VDLLGR G L +A LI+ M
Sbjct: 220 VLYACSHAGLVDDAYYYFTTMKSERKLEPLPGHYGCIVDLLGRAGRLADAEELIQRMKAP 279
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
+ ++W TLL ACKTH +A R AE I ++P A PYVLLSN+++ A RW + R
Sbjct: 280 QSGVLWTTLLGACKTHGDMKLAERAAERIRELDPGSATPYVLLSNVYSEAGRWDLAASVR 339
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
+ M + VKK G SW+E++ ++H+F GD+SHP+ EI L L+ L + +K GY D
Sbjct: 340 KRMDDMKVKKPAGKSWVEVRGKLHEFVAGDQSHPKIGEIVLELKRLLALIKEAGYAADKS 399
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIK 404
A +H+ + EEKE L +HSEKLA+ RG V + K+IS+++
Sbjct: 400 ATLHNAEEEEKEGLLYYHSEKLAMVMGLLHSPRGEPVQVVKNLRVCSDCHTAAKFISKVE 459
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
+R+I++RD +FHHF +G+CSCGDYW
Sbjct: 460 DRQIVLRDTKQFHHFEHGRCSCGDYW 485
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 90/189 (47%), Gaps = 2/189 (1%)
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M G P+ T I++CS L L +G++IHA + G D V ++L+ Y++C
Sbjct: 1 MNQEGTAPNNHTLSIAIAACSALVDLSRGRKIHASLEGCGFQADDHVKNTLMDFYTKCDS 60
Query: 123 LDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
LDD K F + VV W+ +I G EA + F+ ME + A+ VT+ SLL
Sbjct: 61 LDDVKKVFRSMGGDAKVVSWTCLIVGCVQLGSYREAFHFFKLMELQGIHADTVTYASLLD 120
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
ACS+ +G + + + + + T ++ + +CG L EA + + K N
Sbjct: 121 ACSNLASLSQGRKLHARIAELGLLEADVVLQTSILTMYSKCGRLGEARGIFDRIGEK-NI 179
Query: 242 IIWKTLLSA 250
+ W ++ A
Sbjct: 180 VAWSAIIIA 188
>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 674
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 173/446 (38%), Positives = 264/446 (59%), Gaps = 16/446 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ D+ GSSL MY K + L+ R+ I+W ++IAG QNG + L +
Sbjct: 229 GFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRFDQGLGFF 288
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M +P +++F SVI +C+ L L G+Q+HA +++ G + + SSL+ MY++C
Sbjct: 289 RRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDMYAKC 348
Query: 121 GCLDDSVKTFLECEYSD--VVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
G + + F + E D +V W+++I HG +A++LFE+M + V F++
Sbjct: 349 GNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKPCYVAFMA 408
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+L ACSH GL ++G ++F+ M + + P LEHY V DLLGR G L+EA I NM +
Sbjct: 409 VLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEAYDFISNMGEE 468
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
+W TLL+AC+ HK+ ++A ++ +IL V+P + +V++SNI+++A+RW+ ++ R
Sbjct: 469 PTGSVWSTLLAACRAHKNIELAEKVVNKILLVDPGNMGAHVIMSNIYSAAQRWRDAAKLR 528
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
MR+ +KK P SW+E+ N+VH F GDKSHP +I+ L L +M+ GYV DT
Sbjct: 529 VRMRKTGLKKTPACSWIEVGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTN 588
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIK 404
+HD+D E K L+ HSE+LAIAF T G + + K++++I
Sbjct: 589 EVLHDVDEEHKRDLLRTHSERLAIAFGIISTTSGTTIRVIKNIRVCVDCHTAIKFMAKIV 648
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
REIIVRD SRFHHF+NG CSCGDYW
Sbjct: 649 GREIIVRDNSRFHHFKNGSCSCGDYW 674
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 156/337 (46%), Gaps = 28/337 (8%)
Query: 1 GFELDLVAGSSLAHMYMK----------------------SGSLVEGEKVIRLMPIRNVI 38
GF DL ++L +MY K S + K+ MP+R+V+
Sbjct: 106 GFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMPVRDVV 165
Query: 39 AWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEV 98
+W T+IAG AQNG+ E+ L+ M RPD T S++ +E A + +G++IH
Sbjct: 166 SWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEIHGYA 225
Query: 99 VKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAI 158
++ G DV + SSLI MY++C ++ SV F D + W+S+IA +G+ ++ +
Sbjct: 226 IRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRFDQGL 285
Query: 159 NLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDL 218
F +M +++ + V+F S++ AC+H G + +++ + + ++D+
Sbjct: 286 GFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFI-ASSLLDM 344
Query: 219 LGRCGYLDEAAALIRNMPV-KANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDA 275
+CG + A + + + + + W ++ C H A + EE+L GV P
Sbjct: 345 YAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKPCYV 404
Query: 276 APYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGV 312
A +L+ + +G F R+ V PG+
Sbjct: 405 AFMAVLTACSHAGLVDEGWKYFNSMQRDFGV--APGL 439
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 104/236 (44%), Gaps = 24/236 (10%)
Query: 38 IAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAE 97
+AWI +I A +GL L +NL+R G PD+ F S++ + + Q +HA
Sbjct: 42 LAWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLHAA 101
Query: 98 VVKAGASLDVGVISSLISMYSRCGC----------------------LDDSVKTFLECEY 135
V++ G D+ ++L++MYS+ +D K F
Sbjct: 102 VIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMPV 161
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
DVV W+++IA +G EEA+N+ ++M ++ + T S+L + KG E
Sbjct: 162 RDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEI 221
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSAC 251
++ K + ++D+ +C + E + ++ +AI W ++++ C
Sbjct: 222 HGYAIRHGFDKDVFIG-SSLIDMYAKCTQV-ELSVCAFHLLSNRDAISWNSIIAGC 275
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 166/432 (38%), Positives = 255/432 (59%), Gaps = 24/432 (5%)
Query: 18 KSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVS 77
K G+L + K+ M R+ I+W +++ G G ++ L+ + M+ RP + S
Sbjct: 240 KGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSS 299
Query: 78 VISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSD 137
V+++CS + + QG+ +HA + + LD + ++L+ MY++CG LD + F E + +
Sbjct: 300 VLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKERE 359
Query: 138 VVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFD 197
+ W++MI HG+ E+A+ LF ++++ + N +T V +L AC+H G +KG+ F
Sbjct: 360 IFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQ 419
Query: 198 LMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKST 257
M + Y P LEHY C+VDLLGR G EA LI +MP+K NA +W LL AC+ H +
Sbjct: 420 TMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNF 479
Query: 258 DMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEI 317
D+A R+ + +L + PQ++ YVLLSNI+A R+ VS+ R+ M++R +K PGVS +++
Sbjct: 480 DLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKDRGIKTVPGVSIVDL 539
Query: 318 KNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHS 377
VH+F MGD SHP+ EI L+ + +++ G+ PDT + D+D EEKE + +HS
Sbjct: 540 NGTVHEFKMGDGSHPQMKEIYRKLKIIKERLQMAGHSPDTSQVLFDIDEEEKETAVNYHS 599
Query: 378 EKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREIIVRDASRFHH 418
EKLAIAF GLI LP K IS+I +REIIVRD R+HH
Sbjct: 600 EKLAIAF-----GLINTLPGKRIHIVKNLRVCDDCHSATKLISQIFDREIIVRDRVRYHH 654
Query: 419 FRNGKCSCGDYW 430
F+NG CSC D+W
Sbjct: 655 FKNGTCSCKDFW 666
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 127/285 (44%), Gaps = 17/285 (5%)
Query: 27 KVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELA 86
KV +P NV W +I G +N + Y M ++ RP+K T+ ++ +CS
Sbjct: 88 KVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRM-VIDARPNKFTYPTLFKACSVAQ 146
Query: 87 TLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIA 146
+ +G+QIH VVK G DV + S+ I MY+ G L+D+ K F E SDVV W++MI
Sbjct: 147 AVQEGRQIHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKMFYSGE-SDVVCWNTMID 205
Query: 147 AYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRK 206
Y G E A LF QM K + +V ++ + G + FD M ++
Sbjct: 206 GYLKCGVLEAAKGLFAQMPVKNIGSWNV----MINGLAKGGNLGDARKLFDEMSERDEIS 261
Query: 207 PRLEHYTCVVDLLGRCGYLDEAAALIRNMP---VKANAIIWKTLLSACKTHKSTDMAGRI 263
++ +VD G EA + + M + I ++L+AC + D GR
Sbjct: 262 -----WSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQ-GRW 315
Query: 264 AEEILGVNP--QDAAPYVLLSNIHASAKRWQGVSEFREAMRERNV 306
L N DA L +++A R E E M+ER +
Sbjct: 316 VHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREI 360
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 73/152 (48%), Gaps = 2/152 (1%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
+LD V G++L MY K G L G +V M R + W +I G A +G AED L+ ++
Sbjct: 326 KLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSK 385
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVK-AGASLDVGVISSLISMYSRCG 121
++ +P+ IT V V+++C+ + +G +I + + G ++ ++ + R G
Sbjct: 386 LQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSG 445
Query: 122 CLDDSVKTFLECEY-SDVVLWSSMIAAYGFHG 152
++ + +W +++ A HG
Sbjct: 446 LFSEAEDLINSMPMKPNAAVWGALLGACRIHG 477
>gi|296087599|emb|CBI34855.3| unnamed protein product [Vitis vinifera]
Length = 956
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 182/456 (39%), Positives = 259/456 (56%), Gaps = 31/456 (6%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + D + A MY+ + V +P W +I G A +G L+ Y
Sbjct: 506 GLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELY 565
Query: 61 NLMRMVGFRPD-------KITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSL 113
+ M G +PD +++ +SV+ +C L L +G+ H+ V++ G D+ V +++
Sbjct: 566 SKMMEKGLKPDNSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAI 625
Query: 114 ISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEAND 173
+ MYS+CG LD + F E D+V WS+MIA+YG HG G +AI+LF+QM + +
Sbjct: 626 MDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSH 685
Query: 174 VTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIR 233
VTF +L ACSH GL E+G +F LM +++ +L +Y C+VDLLGR G L EA LI
Sbjct: 686 VTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIE 745
Query: 234 NMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQG 293
NMPV+ +A IW +LL AC+ H + D+A +IA+ + ++P A +VLLSNI+A+ RW
Sbjct: 746 NMPVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNE 805
Query: 294 VSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGY 353
V + R+ M R K G S +E NQVH+F +GD+SHP+ ++ LEEL + MK GY
Sbjct: 806 VEKVRKMMARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMKHLGY 865
Query: 354 VPDTGADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP----------------- 396
VP T +HD++ E KE L +HSE+LAIAF GLI P
Sbjct: 866 VPLTDFVLHDIEEEAKEAALSYHSERLAIAF-----GLINTSPGTTLRITKNLRICGDCH 920
Query: 397 --FKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
K IS+I NR I+VRD RFH F +G CSCGDYW
Sbjct: 921 NAIKLISKIVNRVILVRDMHRFHRFEDGVCSCGDYW 956
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 102/165 (61%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
FE + V S S +L EG+K+ ++ ++V++W+ L++G AQNG+A + +
Sbjct: 268 FEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKDVVSWVALLSGYAQNGMAYKSMGVFR 327
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M G +PD + V ++++ SEL Q +H VV++G + +V V +SLI +YS+CG
Sbjct: 328 NMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCG 387
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQ 166
L D+VK F DVV+WSSMIAAYG HG+G EA+ +F+QM Q
Sbjct: 388 SLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMIQ 432
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 130/303 (42%), Gaps = 49/303 (16%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F+ DL +SL ++Y K+G + MP ++VI+W T+IA A N A + L+ ++
Sbjct: 202 FDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFH 261
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M F P+ +T VS + +C+ L +G++IH V
Sbjct: 262 EMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAV---------------------- 299
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+ DVV W ++++ Y +G +++ +F M + + V V +L
Sbjct: 300 -------------WKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILA 346
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
A S G+ ++ + +V+ + +++L +CG L +A L + M V+ +
Sbjct: 347 ASSELGIFQQALCLHGYVVRSGFNSNVFVGAS-LIELYSKCGSLGDAVKLFKGMIVR-DV 404
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGV------------NPQDAAPYVLLSNIHASAK 289
+IW ++++A H A I ++++ V PQ P + S A+
Sbjct: 405 VIWSSMIAAYGIHGRGGEALEIFDQMIQVMQGITSCYQISMQPQVQPPLAITSCTLATHI 464
Query: 290 RWQ 292
W+
Sbjct: 465 PWK 467
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 95/203 (46%), Gaps = 7/203 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D + L +Y K SL KV P NV W + + + E+ L ++LM
Sbjct: 35 DTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMI 94
Query: 65 -MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVK---AGASLDVGVISSLISMYSRC 120
G PD T + +C+ L L G+ IH K G+ + VG S+L+ +YS+C
Sbjct: 95 CTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVG--SALVELYSKC 152
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV-SL 179
G + +++K F E + D VLW+SM+ Y + EEA+ LF QM + D+ V SL
Sbjct: 153 GQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCFDGDLPLVNSL 212
Query: 180 LYACSHCGLKEKGMEFFDLMVKK 202
L + G ++ F M +K
Sbjct: 213 LNLYAKTGCEKIAANLFSKMPEK 235
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 90/198 (45%), Gaps = 34/198 (17%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ GS+L +Y K G + E KV + + W +++ G QN E+ L ++ M
Sbjct: 138 DMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMV 197
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
M+ C + D+ +++SL+++Y++ GC
Sbjct: 198 MM--------------DCFDG--------------------DLPLVNSLLNLYAKTGCEK 223
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ F + DV+ WS+MIA Y + EA+NLF +M +K FE N VT VS L AC+
Sbjct: 224 IAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACA 283
Query: 185 HCGLKEKGMEFFDLMVKK 202
E+G + + V K
Sbjct: 284 VSRNLEEGKKIHKIAVWK 301
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 139/332 (41%), Gaps = 56/332 (16%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF ++ G+SL +Y K GSL + K+ + M +R+V+ W ++IA +G + L+ +
Sbjct: 368 GFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIF 427
Query: 61 NLM----------RMVGFRPDKITFVSVISSCSELAT-----------------LGQGQQ 93
+ M + +P ++ I+SC+ LAT LG +
Sbjct: 428 DQMIQVMQGITSCYQISMQP-QVQPPLAITSCT-LATHIPWKVKAFYMRAHFRWLGHFWE 485
Query: 94 IH------------AEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLW 141
I + + G D +++ MY +D + F + LW
Sbjct: 486 IFPTYPFQAADMSKSNIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLW 545
Query: 142 SSMIAAYGFHGKGEEAINLFEQMEQKEFE-------ANDVTFVSLLYACSHCGLKEKGME 194
+ MI + G+ ++ L+ +M +K + N V+ +S+L AC + G KG E
Sbjct: 546 NVMIRGFATDGRFLSSLELYSKMMEKGLKPDNSGVIPNRVSILSVLLACGNLGALRKG-E 604
Query: 195 FFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
+F V + + + T ++D+ +CG LD A L K + + W ++++ H
Sbjct: 605 WFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGK-DLVCWSAMIASYGIH 663
Query: 255 ----KSTDMAGRIAEEILGVNPQDAAPYVLLS 282
K+ D+ ++ + GV P +LS
Sbjct: 664 GHGRKAIDLFDQMVKA--GVRPSHVTFTCVLS 693
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 101/225 (44%), Gaps = 9/225 (4%)
Query: 93 QIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHG 152
Q+H++V K G D + L S+Y++C L + K F E + +V LW+S + +Y
Sbjct: 22 QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREK 81
Query: 153 KGEEAINLFEQMEQKEFEAND-VTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEH 211
+ EE + LF M EA D T L AC+ + E G K +
Sbjct: 82 QWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFV 141
Query: 212 YTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVN 271
+ +V+L +CG + EA + + + ++W ++++ + + + A + +++ ++
Sbjct: 142 GSALVELYSKCGQMGEALKVFEEFQ-RPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMD 200
Query: 272 PQDA-APYV-LLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSW 314
D P V L N++A + + M E++V +SW
Sbjct: 201 CFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDV-----ISW 240
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 173/444 (38%), Positives = 260/444 (58%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G ++ +++ +Y K G + K+ +P RN + W T+I G Q G E ++ +
Sbjct: 368 GLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLF 427
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M +P ++T+ SV+ + + LA L G QIH+ +K + D V +SLI MY++C
Sbjct: 428 THMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKC 487
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++D+ TF + D V W++MI Y HG EA+NLF+ M+ + + N +TFV +L
Sbjct: 488 GRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVL 547
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACS+ GL KG F+ M K Y KP +EHYTC+V LLGR G DEA LI + + +
Sbjct: 548 SACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQPS 607
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
++W+ LL AC HK D+ A+ +L + P D A +VLLSN++A+A RW V+ R+
Sbjct: 608 VMVWRALLGACVIHKKVDLGRVCAQHVLEMEPHDDATHVLLSNMYATAGRWDNVAFVRKY 667
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+++ V+KEPG+SW+E + VH F++GD SHP I LE L + + GYVPD A
Sbjct: 668 MQKKKVRKEPGLSWVENQGVVHYFSVGDTSHPDIKLICAMLEWLNKKTRDAGYVPDCNAV 727
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA----------EHTRGLIVMLP----FKYISEIKNR 406
+ D+ +EKE +L HSE+LA+A+ + L + + K IS++ R
Sbjct: 728 LLDVQDDEKERHLWVHSERLALAYGLIRTPLSCSIRIIKNLRICIDCHTVMKLISKVVQR 787
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EI++RD +RFHHFR+G CSCGDYW
Sbjct: 788 EIVIRDINRFHHFRHGVCSCGDYW 811
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 140/253 (55%), Gaps = 2/253 (0%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
++ DL G +L +Y KSG +++ +++ MP ++I W +IA AQ+ +++ LD +
Sbjct: 268 YDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFL 327
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
MR P+ TF SV+ +C+ +L G+QIH+ V+K G + +V V ++++ +Y++CG
Sbjct: 328 RMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCG 387
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+++S+K F E + V W+++I Y G GE A+NLF M + + + +VT+ S+L
Sbjct: 388 EIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLR 447
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
A + E G++ L +K K + + ++D+ +CG +++A M K +
Sbjct: 448 ASASLAALEPGLQIHSLTIKTMYNKDTVVANS-LIDMYAKCGRINDARLTFDKMN-KRDE 505
Query: 242 IIWKTLLSACKTH 254
+ W ++ H
Sbjct: 506 VSWNAMICGYSMH 518
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 124/248 (50%), Gaps = 2/248 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D G++L Y G++ V + +++++W ++A A+N E+ L +
Sbjct: 166 GHHADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLF 225
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
N MR++G++P+ T + SC L G+ +H +K D+ V +L+ +Y++
Sbjct: 226 NQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKS 285
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + D+ + F E +D++ WS MIA Y + +EA++LF +M Q N+ TF S+L
Sbjct: 286 GEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVL 345
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+ + G + V K+ + ++D+ +CG ++ + L +P + N
Sbjct: 346 QACASSVSLDLGKQIHSC-VLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDR-N 403
Query: 241 AIIWKTLL 248
+ W T++
Sbjct: 404 DVTWNTII 411
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 118/257 (45%), Gaps = 18/257 (7%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G LDL A + L + Y++S SL + K+ MP N I+++TL G +++ L +
Sbjct: 65 GTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSRDHQFHQAL--H 122
Query: 61 NLMRMV--GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
++R+ G + F +++ + +HA V K G D V ++LI YS
Sbjct: 123 FILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALIDAYS 182
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
G +D + F + D+V W+ M+A Y + EE++ LF QM ++ N+ T
Sbjct: 183 VRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISG 242
Query: 179 LLYACSHCGLKEKGMEFFDL--MVKKYRRKPRLEHYTCV----VDLLGRCGYLDEAAALI 232
L +C G+E F++ V K +H V ++L + G + +A L
Sbjct: 243 ALKSC-------LGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLF 295
Query: 233 RNMPVKANAIIWKTLLS 249
MP K + I W +++
Sbjct: 296 EEMP-KTDLIPWSLMIA 311
>gi|302763761|ref|XP_002965302.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
gi|300167535|gb|EFJ34140.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
Length = 600
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 166/448 (37%), Positives = 259/448 (57%), Gaps = 24/448 (5%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
E D + G+SL +M+ K ++ V +P +N++ W ++A +QN + + +
Sbjct: 158 LESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYSQNWQCKKAIQVFR 217
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M + G +PD +TF+++I +C+ LA +G+ +H ++ +G +DV + ++++ Y +CG
Sbjct: 218 FMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMDVALGTAVMHFYGKCG 277
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
LD++ F + V WS+++AAY +G EAI L+ +M Q E N +TF+ LL+
Sbjct: 278 RLDNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHEMVQGGLEVNGITFLGLLF 337
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
ACSH G G+++F M++ + P EHY ++DLLGR G L + LI +MP + ++
Sbjct: 338 ACSHAGRSMDGVDYFVSMIRDFGVVPVFEHYLNLIDLLGRSGQLQLSEDLINSMPYEPDS 397
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
W LL AC+ H D RIAE I ++P+D+ PY+LLSN+++S R R+AM
Sbjct: 398 SAWLALLGACRMHGDVDRGARIAELIYELDPEDSGPYILLSNLYSSTGRMDEARRTRKAM 457
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
R R + K+PG+S +E+K++VH+F K HP+ I +E L + +K GYV D A +
Sbjct: 458 RLRGITKQPGLSSIEVKDRVHEFMAAQKLHPQLGRIHAEIERLKARVKEAGYVADVRAVL 517
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISE 402
D++ EEKE L +HSE+LAIAF GLI P K IS+
Sbjct: 518 RDVEEEEKEQLLWYHSERLAIAF-----GLISTPPGTALHIVKNLRVCFDCHAAVKAISK 572
Query: 403 IKNREIIVRDASRFHHFRNGKCSCGDYW 430
+ R+I+VRDA RFHHF NG CSCGDYW
Sbjct: 573 VVGRKIVVRDAIRFHHFENGACSCGDYW 600
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 128/253 (50%), Gaps = 6/253 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRN--VIAWITLIAGKAQNGLAEDVLD 58
G+ D + + L MY K G + E V + +N VI+W +I QNGL ++ L
Sbjct: 54 GYASDRLIANLLIEMYGKCGGIAEARSVFDQIQEKNADVISWNGIIGAYTQNGLGKEALH 113
Query: 59 QYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
+ M + G +++T ++ I +C+ L + +G+ +HA V D V +SL++M+
Sbjct: 114 LFKTMDLEGVIANQVTLINAIDACASLPSEEEGRIVHAIAVDKRLESDTMVGTSLVNMFG 173
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+C +D + F ++V W++M+A Y + + ++AI +F M+ + + + VTF++
Sbjct: 174 KCKNVDAARAVFDSLPRKNLVTWNNMVAVYSQNWQCKKAIQVFRFMDLEGVQPDAVTFLT 233
Query: 179 LLYACSHCGLKEKG-MEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
++ AC+ +G M D+ L T V+ G+CG LD A A+ ++
Sbjct: 234 IIDACAALAAHTEGRMVHDDITASGIPMDVALG--TAVMHFYGKCGRLDNARAIFDSLG- 290
Query: 238 KANAIIWKTLLSA 250
K N + W +L+A
Sbjct: 291 KKNTVTWSAILAA 303
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 115/206 (55%), Gaps = 13/206 (6%)
Query: 51 GLAEDVLDQYNLMRMVGFRPDKI-TFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV 109
G+A N R V R ++I T+V ++ C++ L +G+++H+ +VK G + D +
Sbjct: 2 GVATAGWSAANGNRTVDERREEISTYVLLLKKCADSKALLEGKRVHSCLVKDGYASDRLI 61
Query: 110 ISSLISMYSRCGCLDDSVKTF--LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQK 167
+ LI MY +CG + ++ F ++ + +DV+ W+ +I AY +G G+EA++LF+ M+ +
Sbjct: 62 ANLLIEMYGKCGGIAEARSVFDQIQEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLE 121
Query: 168 EFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV----VDLLGRCG 223
AN VT ++ + AC+ +E+G + V K RLE T V V++ G+C
Sbjct: 122 GVIANQVTLINAIDACASLPSEEEGRIVHAIAVDK-----RLESDTMVGTSLVNMFGKCK 176
Query: 224 YLDEAAALIRNMPVKANAIIWKTLLS 249
+D A A+ ++P K N + W +++
Sbjct: 177 NVDAARAVFDSLPRK-NLVTWNNMVA 201
>gi|225457315|ref|XP_002281558.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|297733922|emb|CBI15169.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 166/444 (37%), Positives = 266/444 (59%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE ++ ++L +MY S+ + +V +P RN+++W LI G N + V+D +
Sbjct: 172 GFESNVYVSTALVNMYGTCSSVSDARQVFDEIPDRNIVSWNALITGYNHNRMFRKVIDVF 231
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M++ G +P ++T V V+ +C+ L L QG+ I + L+V V ++LI MY++C
Sbjct: 232 REMQIAGAKPVEVTMVGVLLACAHLGALNQGRWIDDYIDHNRLRLNVFVGTALIDMYAKC 291
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +D++ K F +V W+ +I+ Y +G+GE A+ F +M ++F+ ++VTF+ +L
Sbjct: 292 GVVDEAEKIFKAMRVKNVYTWNVLISGYAMNGRGESALQAFSRMIMEKFKPDEVTFLGVL 351
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC H GL +G +F M +++ +PR+EHY C+VDLLGR G+LDEA LI+ M ++ +
Sbjct: 352 CACCHQGLVNEGRTYFTSMKEEFGLRPRIEHYGCMVDLLGRAGFLDEAQQLIQAMSMQPD 411
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
IIW+ LL AC+ H + + +++L + P + YVLL+N++A +RW V E RE
Sbjct: 412 PIIWRELLGACRIHGNIQLGEFAIKKLLELEPNNGENYVLLANLYARDQRWDKVGEVREM 471
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M R V+K PG S +EI N V++F + + P E+ L ++ ++KL GYV DTG
Sbjct: 472 MDCRRVRKVPGCSSIEIDNVVYEFVVSNYIKPGFEEVYKLLADMNKKLKLAGYVADTGMA 531
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVMLP------------FKYISEIKNR 406
+D++ EEKE++L +HSEKLA+AF + GL + + FK +S++ R
Sbjct: 532 SYDIEEEEKEHSLMYHSEKLALAFGLLKSPSGLTLRIVKNLRICQDCHGFFKIVSKVYRR 591
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
+I VRD +RFHHF G CSC DYW
Sbjct: 592 DISVRDRNRFHHFVGGACSCKDYW 615
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 99/191 (51%), Gaps = 2/191 (1%)
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
Y M G PD TF +V+ S ++L G+ IH +++ G +V V ++L++MY
Sbjct: 130 YTQMWKNGIFPDSSTFPTVLKSVAQLCRQELGKAIHCCIIQMGFESNVYVSTALVNMYGT 189
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
C + D+ + F E ++V W+++I Y + + I++F +M+ + +VT V +
Sbjct: 190 CSSVSDARQVFDEIPDRNIVSWNALITGYNHNRMFRKVIDVFREMQIAGAKPVEVTMVGV 249
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L AC+H G +G + D + R + + T ++D+ +CG +DEA + + M VK
Sbjct: 250 LLACAHLGALNQG-RWIDDYIDHNRLRLNVFVGTALIDMYAKCGVVDEAEKIFKAMRVK- 307
Query: 240 NAIIWKTLLSA 250
N W L+S
Sbjct: 308 NVYTWNVLISG 318
>gi|296089956|emb|CBI39775.3| unnamed protein product [Vitis vinifera]
Length = 599
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 169/406 (41%), Positives = 244/406 (60%), Gaps = 14/406 (3%)
Query: 39 AWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEV 98
+W ++IAG Q G A++ + + M G + +++T V+V+++C++L L G +IH
Sbjct: 194 SWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYS 253
Query: 99 VKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAI 158
+ G +V + ++LI MY +CGCL+++ K F E E VV WS+MI HG+ EEA+
Sbjct: 254 NRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEAL 313
Query: 159 NLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDL 218
LF M Q E N VTF+ LL+ACSH GL +G FF M + Y P++EHY C+VDL
Sbjct: 314 RLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDL 373
Query: 219 LGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPY 278
L R G L EA I NMP+K N ++W LL AC+ HK+ +MA + +L ++P + Y
Sbjct: 374 LSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYY 433
Query: 279 VLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEID 338
V+LSNI+A A RW+ + R+ M++R VKK PG S + + VH+F G++SHP + +I
Sbjct: 434 VVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIF 493
Query: 339 LYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAF------AEHTRGLI 392
EEL EM+L+GYVP+T + D++ EK + HSEKLA+ F AE ++
Sbjct: 494 QRWEELLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALVFGLMNTPAETPIRIM 553
Query: 393 VML--------PFKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
L FK IS I NREI+VRD +RFH F + CSC DYW
Sbjct: 554 KNLRICEDCHSAFKLISAIVNREIVVRDRNRFHCFNDNSCSCRDYW 599
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 86/168 (51%), Gaps = 15/168 (8%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ ++ ++L MY+K G L E KV M R V++W +I G A +G AE+ L +
Sbjct: 257 GFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLF 316
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISS------LI 114
+ M VG P+ +TF+ ++ +CS + + +G++ A + + D G+I ++
Sbjct: 317 SDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTR-----DYGIIPQIEHYGCMV 371
Query: 115 SMYSRCGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGK---GEEAI 158
+ SR G L ++ + L + V+W +++ A H EEAI
Sbjct: 372 DLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAI 419
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 77/183 (42%), Gaps = 18/183 (9%)
Query: 92 QQIHAEVVKAGASLDVGVIS--SLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYG 149
+Q+HA+++K A L + ++ L+ ++ + +E + + +W+S + A
Sbjct: 78 RQVHAQIIKTNAPLSILPLTRVGLVCAFTPSFHYAQQIFKCVEKQKPETFVWNSCLKALA 137
Query: 150 FHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDL----MVKKYRR 205
+AI LF ++ Q + + T S+L AC + DL ++
Sbjct: 138 EGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRAC---------LNLLDLSNGRILHGVVE 188
Query: 206 KPRLEHYTCVVDLLGRCGYLDEAAALIRNMP---VKANAIIWKTLLSACKTHKSTDMAGR 262
K +T ++ +CG EA L M VK N + +L+AC + D+ R
Sbjct: 189 KVGFRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMR 248
Query: 263 IAE 265
I E
Sbjct: 249 IHE 251
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 162/440 (36%), Positives = 260/440 (59%), Gaps = 14/440 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+++ +++ ++ +G + K MP R+ ++W +I G + ++ L + M+
Sbjct: 196 DVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFREMQ 255
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+PD+ T VSV+++C++L L G+ I + K D V ++LI MY +CG ++
Sbjct: 256 TSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGNVE 315
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
++ F D W++M+ +G GEEA+N+F QM + ++VT+V +L AC+
Sbjct: 316 MALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVGVLSACT 375
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H G+ ++G +FF M ++ +P + HY C+VDLLG+ G+L EA +I+NMP+K N+I+W
Sbjct: 376 HTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNSIVW 435
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
LL AC+ HK +MA R E+IL + P + A YVL NI+A+ +W + E R+ M +R
Sbjct: 436 GALLGACRIHKDAEMAERAIEQILELEPNNGAVYVLQCNIYAACNKWDKLRELRQVMMDR 495
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
+KK PG S +E+ VH+F GD+SHP++ EI L ++TS++K+ GY P+T D+
Sbjct: 496 GIKKTPGCSLIEMNGIVHEFVAGDQSHPQTKEIYGKLNKMTSDLKIAGYSPNTSEVFLDI 555
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPF--------------KYISEIKNREIIV 410
E+KE + HSEKLAIAF G V + K +S++ +RE+IV
Sbjct: 556 AEEDKENAVYRHSEKLAIAFGLINSGPGVTIRIVKNLRMCIDCHHVAKLVSKVYDREVIV 615
Query: 411 RDASRFHHFRNGKCSCGDYW 430
RD +RFHHFR+G CSC DYW
Sbjct: 616 RDRTRFHHFRHGSCSCKDYW 635
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 117/278 (42%), Gaps = 52/278 (18%)
Query: 20 GSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVI 79
G + ++ +P +V +W + G ++ + + Y M +PD T+ +
Sbjct: 62 GDMCYARQLFDTIPEPSVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLF 121
Query: 80 SSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTF-LECEYSDV 138
+ L G+++H VVK G +V ++LI+MYS CG +D + F + C+ SDV
Sbjct: 122 KGFTRSVALQLGRELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCK-SDV 180
Query: 139 VLWSSMIAAY---------------GFHGKGE---------------------------- 155
V W++MI+ Y GF G+
Sbjct: 181 VTWNAMISGYNRIKKDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLR 240
Query: 156 -----EAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLE 210
EA+ LF +M+ + + ++ T VS+L AC+ G E G E+ + K + K
Sbjct: 241 LNCYKEALMLFREMQTSKIKPDEFTMVSVLTACAQLGALELG-EWIRTYIDKNKVKNDTF 299
Query: 211 HYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
++D+ +CG ++ A ++ +P + + W ++
Sbjct: 300 VGNALIDMYFKCGNVEMALSIFNTLP-QRDKFTWTAMV 336
>gi|224069701|ref|XP_002303023.1| predicted protein [Populus trichocarpa]
gi|222844749|gb|EEE82296.1| predicted protein [Populus trichocarpa]
Length = 621
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 174/451 (38%), Positives = 262/451 (58%), Gaps = 32/451 (7%)
Query: 12 LAHMYMKSGSLVEGEKVIRLMPIRNVIA------------------WITLIAGKAQNGLA 53
L +Y K G+ + +V MP R+V+A W +I G +NG +
Sbjct: 171 LIELYGKCGAFEDARRVFDEMPERDVVASTVMINYYFDHGIKDTVCWTAMIDGLVRNGES 230
Query: 54 EDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSL 113
L+ + M+ P+++T V V+S+CSEL L G+ + + + K L+ V +L
Sbjct: 231 NRALEVFRNMQREDVMPNEVTIVCVLSACSELGALQLGRWVRSYMDKHRIELNHFVGGAL 290
Query: 114 ISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEAND 173
I+MYSRCG +D++ + F + + +V+ ++SMI + HGK EA+ LF + ++ F +
Sbjct: 291 INMYSRCGDIDEAQRVFEQMKEKNVITYNSMIMGFALHGKSVEAVELFRGLIKQGFTPSS 350
Query: 174 VTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIR 233
VTFV +L ACSH GL E G E F M K Y +P++EHY C+VDLLGR G L+EA + IR
Sbjct: 351 VTFVGVLNACSHGGLAELGFEIFHSMAKDYGIEPQIEHYGCMVDLLGRLGRLEEAYSFIR 410
Query: 234 NMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQG 293
M V + ++ LLSACK H + ++A R+A+ ++ D+ Y+LLSN ++S+ +W+
Sbjct: 411 MMKVAPDHVMLGALLSACKIHGNLELAERVAKSLVACKNADSGTYILLSNAYSSSGKWKE 470
Query: 294 VSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGY 353
+E R MRE ++KEPG S +E+ N++H+F +GD HP+ +I LEEL ++L GY
Sbjct: 471 AAEVRTNMREEGIEKEPGCSSIEVNNEIHEFLLGDLRHPQKEKIYKKLEELNQILRLEGY 530
Query: 354 VPDTGADMHDMDSEEKEYNLKHHSEKLAIAFAE-HTRGLIVM-------------LPFKY 399
P T +HD++ EKE+ L HSE+LAI + T+ L + L K
Sbjct: 531 TPATEVVLHDIEKSEKEWALAIHSERLAICYGLISTKPLTTLRVVKNLRVCNDCHLTIKL 590
Query: 400 ISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
IS I R+I+VRD +RFHHF NG CSCGDYW
Sbjct: 591 ISNITRRKIVVRDRNRFHHFENGVCSCGDYW 621
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 110/241 (45%), Gaps = 28/241 (11%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
NV + LI G + D + Y M PD SV+ +C L +G+++H
Sbjct: 94 NVYLYTALIDGLVLSCYYTDGIHLYYQMINSSLVPDSYAVTSVLKACGCHLALKEGREVH 153
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDV----------------- 138
++V+K G S + + LI +Y +CG +D+ + F E DV
Sbjct: 154 SQVLKLGLSSNRSIRIKLIELYGKCGAFEDARRVFDEMPERDVVASTVMINYYFDHGIKD 213
Query: 139 -VLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFD 197
V W++MI +G+ A+ +F M++++ N+VT V +L ACS G + G
Sbjct: 214 TVCWTAMIDGLVRNGESNRALEVFRNMQREDVMPNEVTIVCVLSACSELGALQLGR---- 269
Query: 198 LMVKKYRRKPRLE--HYT--CVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKT 253
V+ Y K R+E H+ ++++ RCG +DEA + M K N I + +++
Sbjct: 270 -WVRSYMDKHRIELNHFVGGALINMYSRCGDIDEAQRVFEQMKEK-NVITYNSMIMGFAL 327
Query: 254 H 254
H
Sbjct: 328 H 328
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 80/159 (50%), Gaps = 4/159 (2%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
EL+ G +L +MY + G + E ++V M +NVI + ++I G A +G + + ++ +
Sbjct: 280 IELNHFVGGALINMYSRCGDIDEAQRVFEQMKEKNVITYNSMIMGFALHGKSVEAVELFR 339
Query: 62 LMRMVGFRPDKITFVSVISSCSE--LATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ GF P +TFV V+++CS LA LG + H+ G + ++ + R
Sbjct: 340 GLIKQGFTPSSVTFVGVLNACSHGGLAELG-FEIFHSMAKDYGIEPQIEHYGCMVDLLGR 398
Query: 120 CGCLDDSVKTFLECEYS-DVVLWSSMIAAYGFHGKGEEA 157
G L+++ + + D V+ ++++A HG E A
Sbjct: 399 LGRLEEAYSFIRMMKVAPDHVMLGALLSACKIHGNLELA 437
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 169/441 (38%), Positives = 267/441 (60%), Gaps = 15/441 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
DLV + + +Y + G++ ++ L+ ++V++W ++I+ NGLA + L+ ++LM+
Sbjct: 517 DLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMK 576
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G PD I+ VS++S+ + L+ L +G++IH +++ G L+ + S+L+ MY+RCG L+
Sbjct: 577 ETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLE 636
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
S F D+VLW+SMI AYG HG G AI+LF +ME + + + FV++LYACS
Sbjct: 637 KSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACS 696
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL +G F + M +Y+ +P EHY C+VDLLGR +L+EA ++ M V+ A +W
Sbjct: 697 HSGLMNEGRRFLESMKYEYQLEPWPEHYACLVDLLGRANHLEEAYQFVKGMEVEPTAEVW 756
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
LL AC+ H + ++ A+++L ++P++ YVL+SN++++ +RW+ V R M+
Sbjct: 757 CALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYSAERRWKDVEXVRMRMKAS 816
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEM-KLRGYVPDTGADMHD 363
+KK PG SW+E+ N+VH F DKSHP+S EI L ++T ++ K GYV T +H+
Sbjct: 817 GLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLAKEGGYVAQTKFVLHN 876
Query: 364 MDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPF--------------KYISEIKNREII 409
EEK L HSE+LAIA+ T L K IS+ RE++
Sbjct: 877 AKEEEKVQMLYGHSERLAIAYGMLTTPEGASLRITKNLRVCGDCHNFCKLISKFFERELV 936
Query: 410 VRDASRFHHFRNGKCSCGDYW 430
+RDA+RFHHF+ G CSCGD W
Sbjct: 937 MRDANRFHHFKGGVCSCGDVW 957
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 148/271 (54%), Gaps = 9/271 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + DL G+SL MY K S+ + + MP ++V++W T+IAG AQNG L+ +
Sbjct: 413 GLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELF 472
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+++ G D + S++ +CS L + ++IH+ +++ G S D+ + + ++ +Y C
Sbjct: 473 REVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLS-DLVLQNGIVDVYGEC 531
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +D + + F E+ DVV W+SMI+ Y +G EA+ LF M++ E + ++ VS+L
Sbjct: 532 GNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSIL 591
Query: 181 YACSHCGLKEKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
A + +KG E +++K + + L + +VD+ RCG L+++ + N
Sbjct: 592 SAAASLSALKKGKEIHGFLIRKGFVLEGSLA--STLVDMYARCGTLEKSRNVF-NFIRNK 648
Query: 240 NAIIWKTLLSACKTH----KSTDMAGRIAEE 266
+ ++W ++++A H + D+ R+ +E
Sbjct: 649 DLVLWTSMINAYGMHGCGRAAIDLFRRMEDE 679
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 118/242 (48%), Gaps = 3/242 (1%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+ L MY K G LV+ EK+ MP + + W +I NG L+ Y MR+ G
Sbjct: 118 TRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIP 177
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
D TF ++ +C L G ++H +K G V V +S++ MY++C L+ + +
Sbjct: 178 LDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQL 237
Query: 130 FLEC-EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F E DVV W+SMI+AY +G+ EA+ LF +M++ N TFV+ L AC
Sbjct: 238 FDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSF 297
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
++GM F V K + ++ + R G + EAA + NM + I W ++L
Sbjct: 298 IKQGM-FIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMD-DWDTISWNSML 355
Query: 249 SA 250
S
Sbjct: 356 SG 357
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 130/268 (48%), Gaps = 3/268 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIR-NVIAWITLIAGKAQNGLAEDVLDQ 59
G+ + +S+ MY K L ++ MP + +V++W ++I+ + NG + + L
Sbjct: 210 GYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRL 269
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ M+ P+ TFV+ + +C + + + QG IHA V+K+ ++V V ++LI+MY+R
Sbjct: 270 FGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYAR 329
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G + ++ F + D + W+SM++ + +G EA+ + +M + + V +S+
Sbjct: 330 FGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISI 389
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
+ A + G GM+ +K L+ +VD+ + + + MP K
Sbjct: 390 IAASARSGNTLHGMQIHAYAMKN-GLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDK- 447
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEI 267
+ + W T+++ + S A + E+
Sbjct: 448 DVVSWTTIIAGHAQNGSHSRALELFREV 475
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 95/195 (48%), Gaps = 2/195 (1%)
Query: 74 TFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISS-LISMYSRCGCLDDSVKTFLE 132
+ SV+ C L +GQQ+HA ++ + A + +S+ L+ MY +CGCL D+ K F
Sbjct: 80 AYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDG 139
Query: 133 CEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKG 192
+ + W++MI AY +G+ ++ L+ +M + TF +L AC + G
Sbjct: 140 MPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYG 199
Query: 193 MEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACK 252
E L +K+ + +V + +C L+ A L MP K + + W +++SA
Sbjct: 200 AEVHGLAIKEGYVSIVFVANS-IVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYS 258
Query: 253 THKSTDMAGRIAEEI 267
++ + A R+ E+
Sbjct: 259 SNGQSIEALRLFGEM 273
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF L+ S+L MY + G+L + V + ++++ W ++I +G +D +
Sbjct: 614 GFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLF 673
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQI 94
M PD I FV+V+ +CS + +G++
Sbjct: 674 RRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRF 707
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 166/432 (38%), Positives = 254/432 (58%), Gaps = 24/432 (5%)
Query: 18 KSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVS 77
K G+L + K+ M R+ I+W +++ G G ++ L+ + M+ RP + S
Sbjct: 240 KGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSS 299
Query: 78 VISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSD 137
V+++CS + + QG+ +HA + + LD + ++L+ MY++CG LD + F E + +
Sbjct: 300 VLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKERE 359
Query: 138 VVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFD 197
+ W++MI HG+ E+A+ LF ++++ + N +T V +L AC+H G +KG+ F
Sbjct: 360 IFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQ 419
Query: 198 LMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKST 257
M + Y P LEHY C+VDLLGR G EA LI +MP+K NA +W LL AC+ H +
Sbjct: 420 TMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNF 479
Query: 258 DMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEI 317
D+A R+ + +L + PQ++ YVLLSNI+A R+ VS+ R+ M+ R +K PGVS +++
Sbjct: 480 DLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKNRGIKTVPGVSIVDL 539
Query: 318 KNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHS 377
VH+F MGD SHP+ EI L+ + +++ G+ PDT + D+D EEKE + +HS
Sbjct: 540 NGTVHEFKMGDGSHPQMKEIYRKLKIIKERLQMAGHSPDTSQVLFDIDEEEKETAVNYHS 599
Query: 378 EKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREIIVRDASRFHH 418
EKLAIAF GLI LP K IS+I +REIIVRD R+HH
Sbjct: 600 EKLAIAF-----GLINTLPGKRIHIVKNLRVCDDCHSATKLISQIFDREIIVRDRVRYHH 654
Query: 419 FRNGKCSCGDYW 430
F+NG CSC D+W
Sbjct: 655 FKNGTCSCKDFW 666
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 127/285 (44%), Gaps = 17/285 (5%)
Query: 27 KVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELA 86
KV +P NV W +I G +N + Y M ++ RP+K T+ ++ +CS
Sbjct: 88 KVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRM-VIDARPNKFTYPTLFKACSVAQ 146
Query: 87 TLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIA 146
+ +G+QIH VVK G DV + S+ I MY+ G L+D+ K F E SDVV W++MI
Sbjct: 147 AVQEGRQIHGHVVKHGIGSDVHIKSAGIQMYASFGRLEDARKMFYSGE-SDVVCWNTMID 205
Query: 147 AYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRK 206
Y G E A LF QM K + +V ++ + G + FD M ++
Sbjct: 206 GYLKCGVLEAAKGLFAQMPVKNIGSWNV----MINGLAKGGNLGDARKLFDEMSERDEIS 261
Query: 207 PRLEHYTCVVDLLGRCGYLDEAAALIRNMP---VKANAIIWKTLLSACKTHKSTDMAGRI 263
++ +VD G EA + + M + I ++L+AC + D GR
Sbjct: 262 -----WSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQ-GRW 315
Query: 264 AEEILGVNP--QDAAPYVLLSNIHASAKRWQGVSEFREAMRERNV 306
L N DA L +++A R E E M+ER +
Sbjct: 316 VHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREI 360
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 73/152 (48%), Gaps = 2/152 (1%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
+LD V G++L MY K G L G +V M R + W +I G A +G AED L+ ++
Sbjct: 326 KLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSK 385
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVK-AGASLDVGVISSLISMYSRCG 121
++ +P+ IT V V+++C+ + +G +I + + G ++ ++ + R G
Sbjct: 386 LQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSG 445
Query: 122 CLDDSVKTFLECEY-SDVVLWSSMIAAYGFHG 152
++ + +W +++ A HG
Sbjct: 446 LFSEAEDLINSMPMKPNAAVWGALLGACRIHG 477
>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Brachypodium distachyon]
Length = 796
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 172/445 (38%), Positives = 257/445 (57%), Gaps = 15/445 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + + ++L +Y + + + MP + + +W +I+G AQNGL E + +
Sbjct: 352 GLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALF 411
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ + RP+ +T S +S+C++L L G+ +H + L+V V+++LI MY +C
Sbjct: 412 QQMQALNVRPNPLTISSALSACAQLGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKC 471
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + ++ F + +VV W+ MI+ YG HG+G EA+ L++ M TF+S+L
Sbjct: 472 GSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVL 531
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA- 239
YACSH GL ++G F M Y P +EH TC+VDLLGR G L EA LI P A
Sbjct: 532 YACSHGGLVKEGTTVFRSMTSDYGITPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAV 591
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
IW LL AC HK D+A ++++ + P++ YVLLSN++ S K++ + R+
Sbjct: 592 GPGIWGALLGACMVHKDGDLAKLASQKLFELEPENTGYYVLLSNLYTSKKQYSEAAVVRQ 651
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
+ R + K PG + +EI ++ H F GD++HP+S I LYLE+LT++M GY PDT A
Sbjct: 652 EAKSRKLVKTPGCTLIEIGDRPHVFMAGDRAHPQSDAIYLYLEKLTAKMIEAGYRPDTEA 711
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFA----------EHTRGLIVML----PFKYISEIKN 405
++D++ EEKE+ +K HSEKLAIAF + L V L K IS++
Sbjct: 712 ALYDVEEEEKEHMVKVHSEKLAIAFGLLNTEPGTEIRIIKNLRVCLDCHNATKIISKVTQ 771
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
R I+VRDASRFHHFR+G CSCGDYW
Sbjct: 772 RLIVVRDASRFHHFRDGVCSCGDYW 796
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 114/247 (46%), Gaps = 6/247 (2%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+ L +Y K G + + M +++ + LI+G + NG+ ++ + + +G R
Sbjct: 260 TGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLR 319
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P T V++I S +HA VVKAG + V ++L ++Y R +D + +
Sbjct: 320 PSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRA 379
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F + W++MI+ Y +G E A+ LF+QM+ N +T S L AC+ G
Sbjct: 380 FDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGAL 439
Query: 190 EKGMEFFDLMVKKYRRKPRLEHY--TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTL 247
G ++ + K L Y T ++D+ +CG + EA + +M K N + W +
Sbjct: 440 SLGKWVHKIIANE---KLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNK-NVVSWNVM 495
Query: 248 LSACKTH 254
+S H
Sbjct: 496 ISGYGLH 502
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 154/358 (43%), Gaps = 62/358 (17%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D S+LA +Y + KV +P + + W TL+AG + + L+ +
Sbjct: 153 GFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGLS----GSEALEAF 208
Query: 61 NLMRMVG---FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMY 117
+RM G RPD T SV+ + +E+A G+ +HA K G + V++ LIS+Y
Sbjct: 209 --VRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVTGLISLY 266
Query: 118 SRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
++CG ++ + F E D+V ++++I+ Y +G ++ LF+++ + T V
Sbjct: 267 AKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRPSSSTLV 326
Query: 178 SL-----------LYACSHCGLKEKGME------------------------FFDLMVKK 202
+L L C H + + G++ FD M +K
Sbjct: 327 ALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEK 386
Query: 203 YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP---VKANAIIWKTLLSACKTHKSTDM 259
+E + ++ + G + A AL + M V+ N + + LSAC + +
Sbjct: 387 -----TMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSL 441
Query: 260 AGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR---EAMRERNVKKEPGVSW 314
G+ +I+ + YV+ + I K ++E R ++M +NV VSW
Sbjct: 442 -GKWVHKIIANEKLELNVYVMTALIDMYVK-CGSIAEARCIFDSMDNKNV-----VSW 492
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 77/193 (39%), Gaps = 28/193 (14%)
Query: 70 PDKITF----VSVISSCSE------LATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
PD +F S+ SSCS A + +HA V +G + D V S+L +Y
Sbjct: 111 PDSFSFAFAATSLASSCSRGGISPPSAASAALRPLHALAVASGFAADNFVASALAKLYFT 170
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQME-QKEFEANDVTFVS 178
+D+ K F D VLW++++A G EA+ F +M + T S
Sbjct: 171 LSRGNDARKVFDAVPSPDTVLWNTLLAGL----SGSEALEAFVRMAGAGSVRPDSTTLAS 226
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY----TCVVDLLGRCGYLDEAAALIRN 234
+L A + G V + K L + T ++ L +CG ++ A L
Sbjct: 227 VLPAAAEVANTTMGR-----CVHAFGEKCGLAQHEHVVTGLISLYAKCGDMECARHLFDR 281
Query: 235 MP----VKANAII 243
M V NA+I
Sbjct: 282 MEGPDLVTYNALI 294
>gi|297829702|ref|XP_002882733.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328573|gb|EFH58992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 620
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 177/441 (40%), Positives = 257/441 (58%), Gaps = 32/441 (7%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+S MYMK GS+ G ++ MP++ +I W +I+G +QNGLA DVL+ + M+ G
Sbjct: 192 NSFITMYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVC 251
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
PD T VSV+SSC+ L GQ++ V G + +V + ++LISMY+RCG L +
Sbjct: 252 PDPFTLVSVLSSCAHLGAKKIGQEVGELVEANGFAPNVFLSNALISMYARCGNLAKARAV 311
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F +V W++MI YG HG GE + LF+ M ++ + FV +L ACSH GL
Sbjct: 312 FDIMPVKSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGLT 371
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
+KG+E F M ++Y+ +P EHY+C+VDLLGR G LDEA I +MPV+ + +W LL
Sbjct: 372 DKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGALLG 431
Query: 250 ACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKE 309
ACK HK+ DMA +++ P + YVL+SNI++ +K +G+ R MRER +K+
Sbjct: 432 ACKIHKNVDMAELAFAKVIEFEPMNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKK 491
Query: 310 PGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEEL-TSEMKLRGYVPDTGADMHDMDSEE 368
PG S++E K +VH F GD+SH ++ E+ L+EL TS M+L G +M EE
Sbjct: 492 PGYSYVEHKGKVHLFLAGDRSHEQTEEVHRMLDELETSVMELAG-------NMDCDRGEE 544
Query: 369 KEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREII 409
+ HSE+LAIAF G++ +P K +S+I +R +
Sbjct: 545 VSSTTREHSERLAIAF-----GILNSIPGTEILVIKNLRVCEDCHVFIKLVSKIVDRRFV 599
Query: 410 VRDASRFHHFRNGKCSCGDYW 430
VRDASRFH+F++G CSC DYW
Sbjct: 600 VRDASRFHYFKDGVCSCKDYW 620
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 150/315 (47%), Gaps = 8/315 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNV--IAWITLIAGKAQNGLAEDVLD 58
G E + ++L MY K G + + KV P + + + LI+G N D
Sbjct: 80 GCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVSDAAF 139
Query: 59 QYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
+ M+ G D +T + ++ C+ L G+ +H E VK G +V V++S I+MY
Sbjct: 140 MFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFITMYM 199
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+CG ++ + F E ++ W+++I+ Y +G + + LFEQM+ + T VS
Sbjct: 200 KCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPFTLVS 259
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+L +C+H G K+ G E +L V+ P + ++ + RCG L +A A+ MPVK
Sbjct: 260 VLSSCAHLGAKKIGQEVGEL-VEANGFAPNVFLSNALISMYARCGNLAKARAVFDIMPVK 318
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSE 296
+ + W ++ H + + ++++ G+ P A ++LS S +G+
Sbjct: 319 S-LVSWTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLEL 377
Query: 297 FREAMRERNVKKEPG 311
FR RE K EPG
Sbjct: 378 FRAMKRE--YKLEPG 390
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 124/273 (45%), Gaps = 18/273 (6%)
Query: 39 AWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEV 98
+W + A L + + Y M G PD +F ++ SC+ L+ GQQ+H V
Sbjct: 17 SWNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHV 76
Query: 99 VKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDV--VLWSSMIAAYGFHGKGEE 156
++ G + V+++LISMY +CG ++D+ K F E +S V ++++I+ Y + K +
Sbjct: 77 IRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVSD 136
Query: 157 AINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVK--KYRRKPRLEHYTC 214
A +F +M++ + VT + L+ C+ G VK Y L +
Sbjct: 137 AAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSF-- 194
Query: 215 VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNP 272
+ + +CG ++ L MPVK I W ++S + + E++ GV P
Sbjct: 195 -ITMYMKCGSVESGRRLFDEMPVKG-LITWNAVISGYSQNGLAYDVLELFEQMKSSGVCP 252
Query: 273 QDAAPYVLLSNI----HASAKR-WQGVSEFREA 300
P+ L+S + H AK+ Q V E EA
Sbjct: 253 D---PFTLVSVLSSCAHLGAKKIGQEVGELVEA 282
>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 165/433 (38%), Positives = 254/433 (58%), Gaps = 24/433 (5%)
Query: 17 MKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFV 76
++ G + + + MP R+V++W +I+G AQNG + ++ + M+ P+ +T V
Sbjct: 215 VRLGDIKSAKNLFDEMPQRSVVSWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLV 274
Query: 77 SVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYS 136
SV+ + + + L G+ IH K +D + S+L+ MYS+CG +D++++ F
Sbjct: 275 SVLPAIARIGALELGKWIHLYAGKNKIEIDDVLGSALVDMYSKCGSIDEALQVFETLPKR 334
Query: 137 DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFF 196
+ + WS++I A+ HG+ E+AI F M + NDV ++ +L ACSH GL E+G FF
Sbjct: 335 NAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFF 394
Query: 197 DLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKS 256
MVK +PR+EHY C+VDLLGR G+L+EA LIRNMP++ + +IWK LL ACK HK+
Sbjct: 395 SHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIWKALLGACKMHKN 454
Query: 257 TDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLE 316
M R+AE ++ + P D+ YV LSN++AS W+ V+ R M+ +++K+PG SW+E
Sbjct: 455 LKMGERVAETLMELAPHDSGSYVALSNLYASLGNWEAVARVRLKMKGMDIRKDPGCSWIE 514
Query: 317 IKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHH 376
I +H+F + D SH ++ EI L E++ +++ GY P+T + D +E+ L++H
Sbjct: 515 IHGIIHEFLVEDDSHSKAKEIQAMLGEMSMKLRSNGYRPNTLEVFLNTDEQERARALQYH 574
Query: 377 SEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREIIVRDASRFH 417
SEK+A+AF GLI P K IS I R+IIVRD RFH
Sbjct: 575 SEKIAVAF-----GLISTAPQHPLKIVKNLRICEDCHASLKLISLIYKRQIIVRDRKRFH 629
Query: 418 HFRNGKCSCGDYW 430
F +G CSC DYW
Sbjct: 630 QFEHGSCSCMDYW 642
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 134/314 (42%), Gaps = 67/314 (21%)
Query: 28 VIRLMPIRNVIAWITLIAGKAQNG---LAEDVLDQYNLMRMVG-FRPDKITFVSVISSCS 83
V R MP N W T++ A+ L + L ++ M G +P++ TF SV+ +C+
Sbjct: 74 VFRQMPEPNCFCWNTILRVLAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACA 133
Query: 84 ELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFL------------ 131
+ L +G+QIH +VK G D VIS+L+ MY C ++D+ F
Sbjct: 134 RASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQM 193
Query: 132 -----------------------------------ECEYSDVVLWSSMIAAYGFHGKGEE 156
E VV W+ MI+ Y +G E
Sbjct: 194 ELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMISGYAQNGHFIE 253
Query: 157 AINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVV 216
AINLF++M+ + N VT VS+L A + G E G ++ L K + + + +V
Sbjct: 254 AINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELG-KWIHLYAGKNKIEIDDVLGSALV 312
Query: 217 DLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL-------- 268
D+ +CG +DEA + +P K NAI W ++ A H GR + I+
Sbjct: 313 DMYSKCGSIDEALQVFETLP-KRNAITWSAIIGAFAMH------GRAEDAIIHFHLMGKA 365
Query: 269 GVNPQDAAPYVLLS 282
GV P D A +LS
Sbjct: 366 GVTPNDVAYIGILS 379
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 10/204 (4%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
E+D V GS+L MY K GS+ E +V +P RN I W +I A +G AED + ++
Sbjct: 301 IEIDDVLGSALVDMYSKCGSIDEALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFH 360
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVK-AGASLDVGVISSLISMYSRC 120
LM G P+ + ++ ++S+CS + +G+ + +VK G + ++ + R
Sbjct: 361 LMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRA 420
Query: 121 GCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQ-MEQKEFEANDVTFVS 178
G L+++ + D V+W +++ A H + + E ME ++ +S
Sbjct: 421 GHLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVALS 480
Query: 179 LLY-------ACSHCGLKEKGMEF 195
LY A + LK KGM+
Sbjct: 481 NLYASLGNWEAVARVRLKMKGMDI 504
>gi|449475532|ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 331 bits (849), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 165/433 (38%), Positives = 253/433 (58%), Gaps = 24/433 (5%)
Query: 17 MKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFV 76
++ G + + + MP R+V++W +I+G AQNG + ++ + M+ P+ +T V
Sbjct: 215 VRLGDIKSAKNLFDEMPPRSVVSWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLV 274
Query: 77 SVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYS 136
SV+ + + + L G+ IH K +D + S+L+ MYS+CG +D +++ F
Sbjct: 275 SVLPAIARIGALELGKWIHLYAGKNKVEIDDVLGSALVDMYSKCGSIDKALQVFETLPKR 334
Query: 137 DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFF 196
+ + WS++I A+ HG+ E+AI F M + NDV ++ +L ACSH GL E+G FF
Sbjct: 335 NAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFF 394
Query: 197 DLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKS 256
MVK +PR+EHY C+VDLLGR G+L+EA LIRNMP++ + +IWK LL ACK HK+
Sbjct: 395 SHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIWKALLGACKMHKN 454
Query: 257 TDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLE 316
M R+AE ++ + P D+ YV LSN++AS W+ V+ R M+ +++K+PG SW+E
Sbjct: 455 LKMGERVAETLMELAPHDSGSYVALSNLYASLGNWEAVARVRLKMKGMDIRKDPGCSWIE 514
Query: 317 IKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHH 376
I +H+F + D SH ++ EI L E++ +++ GY P+T + D +E+ L++H
Sbjct: 515 IHGIIHEFLVEDDSHSKAKEIQAMLGEMSMKLRSNGYRPNTLEVFLNTDEQERARALQYH 574
Query: 377 SEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREIIVRDASRFH 417
SEK+A+AF GLI P K IS I R+IIVRD RFH
Sbjct: 575 SEKIAVAF-----GLISTAPQHPLKIVKNLRICEDCHASLKLISLIYKRQIIVRDRKRFH 629
Query: 418 HFRNGKCSCGDYW 430
F +G CSC DYW
Sbjct: 630 QFEHGSCSCMDYW 642
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 134/314 (42%), Gaps = 67/314 (21%)
Query: 28 VIRLMPIRNVIAWITLIAGKAQNG---LAEDVLDQYNLMRMVG-FRPDKITFVSVISSCS 83
V R MP N W T++ A+ L + L ++ M G +P++ TF SV+ +C+
Sbjct: 74 VFRQMPEPNCFCWNTILRILAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACA 133
Query: 84 ELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFL------------ 131
+ L +G+QIH +VK G D VIS+L+ MY C ++D+ F
Sbjct: 134 RASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQM 193
Query: 132 -----------------------------------ECEYSDVVLWSSMIAAYGFHGKGEE 156
E VV W+ MI+ Y +G E
Sbjct: 194 ELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVSWNVMISGYAQNGHFIE 253
Query: 157 AINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVV 216
AINLF++M+ + N VT VS+L A + G E G ++ L K + + + +V
Sbjct: 254 AINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELG-KWIHLYAGKNKVEIDDVLGSALV 312
Query: 217 DLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL-------- 268
D+ +CG +D+A + +P K NAI W ++ A H GR + I+
Sbjct: 313 DMYSKCGSIDKALQVFETLP-KRNAITWSAIIGAFAMH------GRAEDAIIHFHLMGKA 365
Query: 269 GVNPQDAAPYVLLS 282
GV P D A +LS
Sbjct: 366 GVTPNDVAYIGILS 379
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 96/203 (47%), Gaps = 10/203 (4%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E+D V GS+L MY K GS+ + +V +P RN I W +I A +G AED + ++L
Sbjct: 302 EIDDVLGSALVDMYSKCGSIDKALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHL 361
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVK-AGASLDVGVISSLISMYSRCG 121
M G P+ + ++ ++S+CS + +G+ + +VK G + ++ + R G
Sbjct: 362 MGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAG 421
Query: 122 CLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQ-MEQKEFEANDVTFVSL 179
L+++ + D V+W +++ A H + + E ME ++ +S
Sbjct: 422 HLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVALSN 481
Query: 180 LY-------ACSHCGLKEKGMEF 195
LY A + LK KGM+
Sbjct: 482 LYASLGNWEAVARVRLKMKGMDI 504
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 331 bits (849), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 168/445 (37%), Positives = 259/445 (58%), Gaps = 25/445 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ +SL MY K + + + R ++W +I G AQNG + L+ ++ M+
Sbjct: 383 DISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMK 442
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+G +PD T VSVI + +EL+ + IH ++++ ++ V ++L+ MYS+CG +
Sbjct: 443 SLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIH 502
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ K F V+ W++MI YG HG G A++LF++M++ E ND+T++S++ ACS
Sbjct: 503 MARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACS 562
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL ++G+ F M + Y +P ++HY +VDLLGR G + EA I NMP+ ++
Sbjct: 563 HSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVY 622
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
ACK HK+ ++ + A+++ +NP + +VLL+NI+AS +W V+E R+ M ++
Sbjct: 623 GAXXGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKK 682
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
+KK PG S +E++N+VH F G +HP+S I +LEEL E+K GYVPDT + D+
Sbjct: 683 GLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIKAAGYVPDTNLIL-DV 741
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKN 405
+ + +E L HSEKLAIAF GL+ P KYIS +
Sbjct: 742 EDDVQEQLLNSHSEKLAIAF-----GLLNTSPGTTIHVRKNLRVCGDCHNATKYISLVTG 796
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
REIIVRD RFHHF+NG CSCGDYW
Sbjct: 797 REIIVRDMQRFHHFKNGICSCGDYW 821
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 135/247 (54%), Gaps = 2/247 (0%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F ++ A + + +MY K + + K+ MP R++++W T+IAG +QNG A+ L+
Sbjct: 178 FAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVL 237
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M+ G RPD IT V+V+ + +++ L G+ IH ++AG + V + ++L MYS+CG
Sbjct: 238 RMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCG 297
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
++ + F + VV W+SM+ Y +G+ E+AI +FE+M ++ + VT + L+
Sbjct: 298 SVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALH 357
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
AC+ G E+G +F V + + ++ + +C +D A+ + N+ + +
Sbjct: 358 ACADLGDLERG-KFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTH- 415
Query: 242 IIWKTLL 248
+ W ++
Sbjct: 416 VSWNAMI 422
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 139/304 (45%), Gaps = 12/304 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF + ++LA MY K GS+ + M + V++W +++ G QNG E + +
Sbjct: 278 GFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVF 337
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G P +T + + +C++L L +G+ +H V + D+ V++SLISMYS+C
Sbjct: 338 EKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKC 397
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
+D + F V W++MI Y +G+ EA+N F +M+ + + T VS++
Sbjct: 398 KRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVI 457
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
A + + L+++ K + T +VD+ +CG + A L +M +
Sbjct: 458 PALAELSVTRHAKWIHGLIIRSCLDK-NIFVTTALVDMYSKCGAIHMARKLF-DMISDRH 515
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEIL------GVNPQDAAPYVLLSNIHASAKRWQGV 294
I W ++ TH GR A ++ V P D ++S S +G+
Sbjct: 516 VITWNAMIDGYGTHG----LGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGL 571
Query: 295 SEFR 298
F+
Sbjct: 572 RHFK 575
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 135/281 (48%), Gaps = 7/281 (2%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+ L ++ K GS+ E +V + + + T++ G A+N E L MR +
Sbjct: 85 TKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVK 144
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P F ++ C + A L +G++IH +++ + +V ++ +++MY++C +DD+ K
Sbjct: 145 PVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKM 204
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F D+V W+++IA + +G ++A+ L +M+ + + +T V++L A + GL
Sbjct: 205 FDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLL 264
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
G ++ K + T + D+ +CG ++ A + M K + W +++
Sbjct: 265 MVGKSIHGYAIRAGFAK-LVNISTALADMYSKCGSVETARLIFDGMDQKT-VVSWNSMMD 322
Query: 250 ACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASA 288
+ + A + E++L G++P ++ +HA A
Sbjct: 323 GYVQNGEPEKAIAVFEKMLEEGIDPTGV---TIMEALHACA 360
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/169 (20%), Positives = 74/169 (43%), Gaps = 5/169 (2%)
Query: 82 CSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLW 141
C+ + L QI V+K G + + L+S++S+ G ++++ + F + L+
Sbjct: 59 CTSMKEL---HQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALY 115
Query: 142 SSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVK 201
+M+ Y + E A+ +M + + F LL C ++G E ++
Sbjct: 116 HTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLIT 175
Query: 202 KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+ T VV++ +C +D+A + MP + + + W T+++
Sbjct: 176 N-SFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPER-DLVSWNTIIAG 222
>gi|302793743|ref|XP_002978636.1| hypothetical protein SELMODRAFT_109283 [Selaginella moellendorffii]
gi|300153445|gb|EFJ20083.1| hypothetical protein SELMODRAFT_109283 [Selaginella moellendorffii]
Length = 438
Score = 331 bits (849), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 171/429 (39%), Positives = 254/429 (59%), Gaps = 14/429 (3%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
+ K G+L ++ + W +IA Q+G + + ++ + P+ +T
Sbjct: 10 FAKVGNLHLAARIFARTDRSYIFPWNAMIAAYVQHGDSRQAIRLFDELLARRIEPNSVTL 69
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
+ V+ +C+ LA L G+++HA G +V V ++++ MYS+CGCLD++V+ F E
Sbjct: 70 MEVLDACASLAALRDGKRVHAIARDHGVDSEVAVATAIVDMYSKCGCLDEAVEAFARIER 129
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
D V W++M+AA+ HG + A+ F++M+++ + N VTFV LL ACSH GL E+G ++
Sbjct: 130 HDTVSWTAMLAAFAQHGHIDRALATFQRMQEQGHKPNYVTFVHLLSACSHKGLVEEGRKY 189
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK 255
FDLM +Y P +HY C+VDLLGR GYLDEA + MP +A + K+LLSAC+++K
Sbjct: 190 FDLMTARYGIAPDAQHYACMVDLLGRAGYLDEAEDFLNRMPGAPHAAVLKSLLSACRSYK 249
Query: 256 STDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWL 315
D RIA+ +L ++ PYV+L++I+ +A +W+ + R M ER V+K+PG S +
Sbjct: 250 DVDRGERIAKRMLESFWDESMPYVVLASIYRAAGKWEEAARIRSLMVERGVRKDPGRSAI 309
Query: 316 EIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKH 375
E++ +V +F GD SH + I L+EL+S MK GYVPDT +HD+ EEKE L
Sbjct: 310 EVEGRVFEFVAGDMSHVQMNPIRAKLQELSSAMKEAGYVPDTSLVLHDVAEEEKEQVLLW 369
Query: 376 HSEKLAIAF------AEHTRGLIVMLPF--------KYISEIKNREIIVRDASRFHHFRN 421
HSEKLA+AF A +I L K IS I+ R I+ RD SRFHHF N
Sbjct: 370 HSEKLAVAFGLLNTPAGSPIRVIKNLRVCKDCHDAAKLISAIEQRRIVFRDLSRFHHFEN 429
Query: 422 GKCSCGDYW 430
G CSCGDYW
Sbjct: 430 GVCSCGDYW 438
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 2/151 (1%)
Query: 110 ISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEF 169
+ +++S +++ G L + + F + S + W++MIAAY HG +AI LF+++ +
Sbjct: 3 LVTVLSAFAKVGNLHLAARIFARTDRSYIFPWNAMIAAYVQHGDSRQAIRLFDELLARRI 62
Query: 170 EANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAA 229
E N VT + +L AC+ G + + + + T +VD+ +CG LDEA
Sbjct: 63 EPNSVTLMEVLDACASLAALRDGKRVHAI-ARDHGVDSEVAVATAIVDMYSKCGCLDEAV 121
Query: 230 ALIRNMPVKANAIIWKTLLSACKTHKSTDMA 260
+ + + + W +L+A H D A
Sbjct: 122 EAFARIE-RHDTVSWTAMLAAFAQHGHIDRA 151
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 64/127 (50%), Gaps = 1/127 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + ++ +++ MY K G L E + + + ++W ++A AQ+G + L +
Sbjct: 96 GVDSEVAVATAIVDMYSKCGCLDEAVEAFARIERHDTVSWTAMLAAFAQHGHIDRALATF 155
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQ-IHAEVVKAGASLDVGVISSLISMYSR 119
M+ G +P+ +TFV ++S+CS + +G++ + G + D + ++ + R
Sbjct: 156 QRMQEQGHKPNYVTFVHLLSACSHKGLVEEGRKYFDLMTARYGIAPDAQHYACMVDLLGR 215
Query: 120 CGCLDDS 126
G LD++
Sbjct: 216 AGYLDEA 222
>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Brachypodium distachyon]
Length = 1206
Score = 331 bits (849), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 168/449 (37%), Positives = 262/449 (58%), Gaps = 24/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E +L G++L +Y K + ++ + N ++W T+I G +++G E L +
Sbjct: 763 GHESELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVF 822
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
MR ++T+ SV+ +C+ A++ Q+H + K+ + D V +SLI Y++C
Sbjct: 823 REMRAASVPSTQVTYSSVLRACASTASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYAKC 882
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
GC+ D+ + F + D+V W+++I+ Y HG+ A LF+ M + +AND+TFV+LL
Sbjct: 883 GCIRDAREIFETLKECDLVSWNAIISGYAVHGQAAMAQELFDMMSKNSIKANDITFVALL 942
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
C GL +G+ FD M + +P +EHYTC+V LLGR G L++A I ++P +
Sbjct: 943 SVCGSTGLVSQGLSLFDSMRLDHGIEPSMEHYTCIVRLLGRAGRLNDALNFIGDIPSAPS 1002
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A++W+ LLS+C HK+ ++ AE++L + PQD YVLLSN++++A V+ FR++
Sbjct: 1003 AMVWRALLSSCIVHKNVELGRFSAEKVLEIEPQDETTYVLLSNMYSAAGSLDQVAFFRKS 1062
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
MR V+KEPG+SW+EIK +VH F++G + HP I+ LE L + GYVPDT
Sbjct: 1063 MRNIGVRKEPGLSWVEIKGEVHAFSVGSEDHPCMRVINAMLEWLNLKAIREGYVPDTDEV 1122
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
+HD++ E+K L HSE+LA+A+ GL++ P FK IS
Sbjct: 1123 LHDLEEEQKVRMLWVHSERLALAY-----GLVMTPPGHPIRIMKNLRSCLDCHAIFKVIS 1177
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+I +EIIVRD +RFHHF G CSCGDYW
Sbjct: 1178 KIVKQEIIVRDINRFHHFEEGTCSCGDYW 1206
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 138/305 (45%), Gaps = 27/305 (8%)
Query: 11 SLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRP 70
+L MY K G++ + ++ +VI W +I+ AQ E + + M P
Sbjct: 672 ALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSP 731
Query: 71 DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTF 130
++ + SV+ +C+ + L G+QIH +K G ++ V ++LI +Y++C ++ S++ F
Sbjct: 732 NEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDMESSLEIF 791
Query: 131 LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS------ 184
+ V W+++I Y G GE A+++F +M + VT+ S+L AC+
Sbjct: 792 SSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRACASTASIN 851
Query: 185 -----HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
HC L EK D +V ++D +CG + +A + + +
Sbjct: 852 HVGQVHC-LIEKSTFNSDTIVSN-----------SLIDSYAKCGCIRDAREIFETLK-EC 898
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEF 297
+ + W ++S H MA + + + + D LLS ++ QG+S F
Sbjct: 899 DLVSWNAIISGYAVHGQAAMAQELFDMMSKNSIKANDITFVALLSVCGSTGLVSQGLSLF 958
Query: 298 REAMR 302
++MR
Sbjct: 959 -DSMR 962
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 122/248 (49%), Gaps = 2/248 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + + GS+L Y G + + +V + ++ +AW +++ ++N E+ L +
Sbjct: 561 GHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYSENDCPENTLQIF 620
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ MR+ + + SV+ + L+++ G+ IHA VK + V +L+ MY++C
Sbjct: 621 SKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTERHVYGALLDMYAKC 680
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++D+ F DV+LWS MI+ Y + E+A LF +M + N+ + S+L
Sbjct: 681 GNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVL 740
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC++ L + G + + + K + L ++DL +C ++ + + ++ N
Sbjct: 741 QACANMPLLDLGKQIHNHAI-KIGHESELFVGNALIDLYAKCSDMESSLEIFSSL-RDVN 798
Query: 241 AIIWKTLL 248
+ W T++
Sbjct: 799 EVSWNTII 806
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 109/246 (44%), Gaps = 2/246 (0%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
LDL + L +MY K G +V +P RN+++++TL+ G A G E+ + +
Sbjct: 463 LDLFCANVLLNMYTKVGPFGSAHRVFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRL 522
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
R G ++ +V+ + TLG +HA K G + V S+LI YS CG +
Sbjct: 523 RWEGHEVNQFVLTTVLKLVVAMDTLGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVV 582
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
D+ + F D V W++M++ Y + E + +F +M + N S+L A
Sbjct: 583 SDARRVFDGIVGKDAVAWTAMVSCYSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAA 642
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
G VK R Y ++D+ +CG +++ A L M + I+
Sbjct: 643 VCLSSVVLGKGIHACSVKTLYDTER-HVYGALLDMYAKCGNIED-ARLAFEMVTNDDVIL 700
Query: 244 WKTLLS 249
W ++S
Sbjct: 701 WSLMIS 706
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 37/187 (19%), Positives = 80/187 (42%), Gaps = 16/187 (8%)
Query: 71 DKITFVSVISSCSELATLGQGQQIHAEVVKAG--ASLDVGVISSLISMYSRCGCLDDSVK 128
D + ++ C G+ +H VV++G A LD+ + L++MY++ G + +
Sbjct: 427 DSYAYARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHR 486
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F ++V + +++ + G+ EEA LF+++ + E N ++L
Sbjct: 487 VFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLV----- 541
Query: 189 KEKGMEFFDLMVKKYRRKPRLEH------YTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
M+ L + +L H + ++D CG + +A + + V +A+
Sbjct: 542 --VAMDTLGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGI-VGKDAV 598
Query: 243 IWKTLLS 249
W ++S
Sbjct: 599 AWTAMVS 605
>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Cucumis sativus]
Length = 1037
Score = 331 bits (848), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 181/444 (40%), Positives = 266/444 (59%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF DL ++L +Y + G + E + +N I+W +L++G AQ+G E+ L +
Sbjct: 594 GFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVF 653
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M + T+ S IS+ + LA + QGQQIH+ V+K G + V +SLIS+Y++
Sbjct: 654 VRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKS 713
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + D+ + F + +V+ W++MI Y HG G EA+ LFE+M+ N VTFV +L
Sbjct: 714 GSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVL 773
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL ++G+++F+ M K + P+ EHY CVVDLLGR G LD A I+ MP+ A+
Sbjct: 774 SACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPAD 833
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A+IW+TLLSAC HK+ ++ R A +L + P+D+A YVL+SNI+A +++W R+
Sbjct: 834 AMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKL 893
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M++R VKKEPG SW+E+KN VH F GDK HP + +I Y+ L GYV D+ +
Sbjct: 894 MKDRGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLNRRTSEIGYVQDSFSL 953
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP--------------FKYISEIKNR 406
+++ + +K+ HSEKLAIAF + G + + KY+S+I NR
Sbjct: 954 LNESEQGQKDPITHVHSEKLAIAFGLLSLGNNIPIRVMKNLRVCNDCHNWIKYVSKISNR 1013
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
IIVRDA RFHHF G CSC D+W
Sbjct: 1014 SIIVRDAHRFHHFDGGVCSCKDFW 1037
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 141/269 (52%), Gaps = 6/269 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF + + L +Y +S L+ E++ M R+ +++ +LI+G Q G ++ L+ +
Sbjct: 291 GFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELF 350
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ +PD IT S++S+C+ + L +G Q+H+ +KAG S D+ + SL+ +YS+C
Sbjct: 351 TKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKC 410
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
++ + K FL E ++VLW+ M+ AYG ++ +F QM+ + N T+ S+L
Sbjct: 411 ADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSIL 470
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC--VVDLLGRCGYLDEAAALIRNMPVK 238
C+ G G + ++K +L Y C ++D+ + G L A ++R +P +
Sbjct: 471 RTCTSLGALYLGEQIHTHVIKT---GFQLNVYVCSVLIDMYAKYGQLALALRILRRLP-E 526
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEI 267
+ + W +++ H A ++ EE+
Sbjct: 527 DDVVSWTAMIAGYVQHDMFSEALQLFEEM 555
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 144/284 (50%), Gaps = 4/284 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+L++ S L MY K G L +++R +P +V++W +IAG Q+ + + L +
Sbjct: 493 GFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLF 552
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G + D I F S IS+C+ + L QGQQIHA+ AG D+ + ++LIS+Y+RC
Sbjct: 553 EEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARC 612
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + ++ F + + + W+S+++ G EEA+ +F +M + E E N T+ S +
Sbjct: 613 GRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAI 672
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
A + ++G + +++K R E ++ L + G + +A +M + N
Sbjct: 673 SAAASLANIKQGQQIHSMVLKTGYDSER-EVSNSLISLYAKSGSISDAWREFNDMSER-N 730
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEE--ILGVNPQDAAPYVLLS 282
I W +++ H A R+ EE + G+ P +LS
Sbjct: 731 VISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLS 774
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 119/252 (47%), Gaps = 6/252 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D++ SL +Y K + K N++ W ++ Q D + +
Sbjct: 392 GMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIF 451
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+M G P++ T+ S++ +C+ L L G+QIH V+K G L+V V S LI MY++
Sbjct: 452 RQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKY 511
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L +++ DVV W++MIA Y H EA+ LFE+ME + + +++ F S +
Sbjct: 512 GQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAI 571
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRR--KPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
AC+ +G + + + Y L ++ L RCG + EA + K
Sbjct: 572 SACAGIRALRQGQQ---IHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDK 628
Query: 239 ANAIIWKTLLSA 250
N I W +L+S
Sbjct: 629 -NNISWNSLVSG 639
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 123/250 (49%), Gaps = 2/250 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ + + L +Y K+G + +KV + +++++ W+ +I+G +QNGL E+ + +
Sbjct: 190 GFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLF 249
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M P SV+S+ +++ G+Q+H V+K G + V + L+++YSR
Sbjct: 250 CDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRS 309
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
L + + F D V ++S+I+ G + A+ LF +M++ + + +T SLL
Sbjct: 310 RKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLL 369
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+ G KGM+ +K + + ++DL +C ++ A + N
Sbjct: 370 SACASVGALHKGMQLHSHAIKAGMSADIILEGS-LLDLYSKCADVETAHKFFLTTETE-N 427
Query: 241 AIIWKTLLSA 250
++W +L A
Sbjct: 428 IVLWNVMLVA 437
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 111/288 (38%), Gaps = 36/288 (12%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ + + SL Y + G KV R+V +W +I V +
Sbjct: 88 GFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLF 147
Query: 61 NLMRMVGFRPDKITFVSVISSC--SELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
M G P+ TF V+ +C ++A +Q+H+ G V + LI +YS
Sbjct: 148 RRMLAEGITPNGYTFAGVLKACVGGDIA-FNYVKQVHSRTFYYGFDSSPLVANLLIDLYS 206
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+ G ++ + K F D+V W +MI+ +G EEAI LF M E S
Sbjct: 207 KNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSS 266
Query: 179 LLYACSHCGLKEKGMEFFDLMVK---------------KYRRKPRL-------------- 209
+L A + L E G + L++K Y R +L
Sbjct: 267 VLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRD 326
Query: 210 -EHYTCVVDLLGRCGYLDEAAALIRNMP---VKANAIIWKTLLSACKT 253
Y ++ L + G+ D A L M +K + I +LLSAC +
Sbjct: 327 GVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACAS 374
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 92/234 (39%), Gaps = 12/234 (5%)
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
N M G R + ++ ++ C +L + ++H + K+G + +I SL+ Y R
Sbjct: 47 NFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRH 106
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +VK F E V W+ MI + + LF +M + N TF +L
Sbjct: 107 GDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVL 166
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC + ++ Y ++DL + GY+ E+A + N +
Sbjct: 167 KACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYI-ESAKKVFNCICMKD 225
Query: 241 AIIWKTLLSACKTHKSTDMAGRI-----AEEILGVNPQDAAPYVLLSNIHASAK 289
+ W ++S + + A + A EI PYVL S + AS K
Sbjct: 226 IVTWVAMISGLSQNGLEEEAILLFCDMHASEIF------PTPYVLSSVLSASTK 273
>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Vitis vinifera]
Length = 611
Score = 331 bits (848), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 170/450 (37%), Positives = 260/450 (57%), Gaps = 26/450 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D+ ++L +Y K G + ++ P RN + W T+I G Q G E L +
Sbjct: 168 GLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLF 227
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M + ++T+ S + +C+ LA L G QIH+ VK D+ V ++LI MY++C
Sbjct: 228 LNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKC 287
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + D+ F D V W++MI+ Y HG G EA+ +F++M++ E + + +TFV +L
Sbjct: 288 GSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVL 347
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC++ GL ++G +F M++ + +P +EHYTC+V LLGR G+LD+A LI +P + +
Sbjct: 348 SACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPS 407
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
++W+ LL AC H ++ A+ +L + PQD A +VLLSN++A+AKRW V+ R+
Sbjct: 408 VMVWRALLGACVIHNDIELGRISAQRVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKN 467
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+ + VKKEPG+SW+E + VH FT+GD SHP I+ LE L + K GY+P+
Sbjct: 468 MKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNVV 527
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP--------------------FKYI 400
+ D++ EEKE L HSE+LA++F I+ P K I
Sbjct: 528 LLDVEDEEKERLLWVHSERLALSFG------IIRTPSGSPIRIMKNLRICVDCHAAIKCI 581
Query: 401 SEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
S++ REI+VRD +RFHHF+ G CSCGDYW
Sbjct: 582 SKVVQREIVVRDINRFHHFQEGLCSCGDYW 611
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 164/312 (52%), Gaps = 9/312 (2%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY-NL 62
LDL A + L +MY+KS L + K+ MP RN I+++TLI G A++ + ++ + L
Sbjct: 71 LDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRL 130
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
R V P++ TF SV+ +C+ + L G QIH V+K G DV V ++L+ +Y++CG
Sbjct: 131 HREV--LPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGR 188
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
+++S++ F E + + V W+++I + G GE+A+ LF M + +A +VT+ S L A
Sbjct: 189 MENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRA 248
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
C+ E G++ L VK K + ++D+ +CG + + A L+ ++ K + +
Sbjct: 249 CASLAALEPGLQIHSLTVKTTFDKD-IVVTNALIDMYAKCGSIKD-ARLVFDLMNKQDEV 306
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
W ++S H A RI +++ V P +LS + QG + F
Sbjct: 307 SWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSM 366
Query: 301 MRERNVKKEPGV 312
+++ + EP +
Sbjct: 367 IQDHGI--EPCI 376
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 85/185 (45%), Gaps = 25/185 (13%)
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
+ + + C + +G+ +H E++K G LD+ + L++MY + L D+ K F E
Sbjct: 41 YANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMP 100
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS---------- 184
+ + + ++I Y + EAI LF ++ +E N TF S+L AC+
Sbjct: 101 ERNTISFVTLIQGYAESVRFLEAIELFVRL-HREVLPNQFTFASVLQACATMEGLNLGNQ 159
Query: 185 -HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
HC + + G+ D+ V ++D+ +CG ++ + L P + N +
Sbjct: 160 IHCHVIKIGLH-SDVFVS-----------NALMDVYAKCGRMENSMELFAESPHR-NDVT 206
Query: 244 WKTLL 248
W T++
Sbjct: 207 WNTVI 211
>gi|15239745|ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g48910
gi|10177180|dbj|BAB10314.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|15810559|gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|332008359|gb|AED95742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 646
Score = 331 bits (848), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 166/434 (38%), Positives = 256/434 (58%), Gaps = 24/434 (5%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
YM+ G + M R+V++W T+I+G + NG +D ++ + M+ RP+ +T
Sbjct: 218 YMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTL 277
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
VSV+ + S L +L G+ +H +G +D + S+LI MYS+CG ++ ++ F
Sbjct: 278 VSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPR 337
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
+V+ WS+MI + HG+ +AI+ F +M Q +DV +++LL ACSH GL E+G +
Sbjct: 338 ENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRY 397
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK 255
F MV +PR+EHY C+VDLLGR G LDEA I NMP+K + +IWK LL AC+
Sbjct: 398 FSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQG 457
Query: 256 STDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWL 315
+ +M R+A ++ + P D+ YV LSN++AS W VSE R M+E++++K+PG S +
Sbjct: 458 NVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLI 517
Query: 316 EIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKH 375
+I +H+F + D SHP++ EI+ L E++ +++L GY P T + +++ E+KE L +
Sbjct: 518 DIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENVLHY 577
Query: 376 HSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREIIVRDASRF 416
HSEK+A AF GLI P K IS++ R+I VRD RF
Sbjct: 578 HSEKIATAF-----GLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRF 632
Query: 417 HHFRNGKCSCGDYW 430
HHF++G CSC DYW
Sbjct: 633 HHFQDGSCSCMDYW 646
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 137/308 (44%), Gaps = 56/308 (18%)
Query: 27 KVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQ---YNLMRMVGFRPDKITFVSVISSCS 83
K+ MP RN +W T+I G +++ + ++ Y +M P++ TF SV+ +C+
Sbjct: 80 KIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACA 139
Query: 84 ELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFL------------ 131
+ + +G+QIH +K G D V+S+L+ MY CG + D+ F
Sbjct: 140 KTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMT 199
Query: 132 -----------------------ECEYS----------DVVLWSSMIAAYGFHGKGEEAI 158
+C+ + VV W++MI+ Y +G ++A+
Sbjct: 200 DRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAV 259
Query: 159 NLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDL 218
+F +M++ + N VT VS+L A S G E G E+ L + + + ++D+
Sbjct: 260 EVFREMKKGDIRPNYVTLVSVLPAISRLGSLELG-EWLHLYAEDSGIRIDDVLGSALIDM 318
Query: 219 LGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH----KSTDMAGRIAEEILGVNPQD 274
+CG +++A + +P + N I W +++ H + D ++ + GV P D
Sbjct: 319 YSKCGIIEKAIHVFERLP-RENVITWSAMINGFAIHGQAGDAIDCFCKMRQA--GVRPSD 375
Query: 275 AAPYVLLS 282
A LL+
Sbjct: 376 VAYINLLT 383
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 83/169 (49%), Gaps = 5/169 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +D V GS+L MY K G + + V +P NVI W +I G A +G A D +D +
Sbjct: 304 GIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCF 363
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSR 119
MR G RP + +++++++CS + +G++ +++V G + ++ + R
Sbjct: 364 CKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGR 423
Query: 120 CGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGK---GEEAINLFEQM 164
G LD++ + L D V+W +++ A G G+ N+ M
Sbjct: 424 SGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDM 472
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 331 bits (848), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 177/447 (39%), Positives = 257/447 (57%), Gaps = 27/447 (6%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E DL+ SL +Y K G ++ + ++I W +I+G +NG AE+ ++ + L
Sbjct: 308 EFDLLI--SLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRL 365
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M+ RPD IT S I++C+++ +L + + + + DV V +SLI Y++CG
Sbjct: 366 MKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGS 425
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
+D + F DVV+WS+M+ YG HG+G E+I LF M Q NDVTFV LL A
Sbjct: 426 VDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTA 485
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
C + GL E+G + F M + Y +PR +HY CVVDLLGR G+LD A + NMP++
Sbjct: 486 CKNSGLVEEGWDLFHRM-RDYGIEPRHQHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVS 544
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMR 302
+W LLSACK H+ + AE + ++P + YV LSN++AS+ W V++ R MR
Sbjct: 545 VWGALLSACKIHRHVTLGEYAAERLFSLDPYNTGHYVQLSNLYASSCLWDCVAKVRVLMR 604
Query: 303 ERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMH 362
E+ + K G S +EI ++ F GDK+HPRS EI +E+L +K G+VP T + +H
Sbjct: 605 EKGLTKHLGYSVIEINGKLQAFQAGDKTHPRSKEIFEEVEDLERRLKEAGFVPHTESVLH 664
Query: 363 DMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEI 403
D++ EE E L +HSE+LAIA+ GLI P K IS++
Sbjct: 665 DLNYEETEETLCNHSERLAIAY-----GLISTPPGTTLRITKNLRACDNCHAAIKLISKL 719
Query: 404 KNREIIVRDASRFHHFRNGKCSCGDYW 430
+REI+VRDA RFHHF++G CSCGDYW
Sbjct: 720 VSREIVVRDACRFHHFKDGACSCGDYW 746
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 151/318 (47%), Gaps = 19/318 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE D+ + L +Y K G +V V + R +++W ++I+G AQNG + L +
Sbjct: 203 GFESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIF 262
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ MR RPD I VSV+ + +++ L G+ IH V+K G + ++ SL S+Y++C
Sbjct: 263 SEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKC 322
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + F + E ++ W++MI+ Y +G EEAI LF M+ K + +T S +
Sbjct: 323 GHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSI 382
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+ G E + D + + + T ++D +CG +D A + +P K +
Sbjct: 383 AACAQIGSLELA-RWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDK-D 440
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEIL--------GVNPQDAAPYVLLSNIHASAKRWQ 292
++W ++ H G+ E I+ GV+P D LL+ S +
Sbjct: 441 VVVWSAMMVGYGLH------GQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEE 494
Query: 293 GVSEFREAMRERNVKKEP 310
G F R R+ EP
Sbjct: 495 GWDLFH---RMRDYGIEP 509
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 107/231 (46%), Gaps = 2/231 (0%)
Query: 20 GSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVI 79
G + K+ P +V W ++ +++G ++ Y M++ PD +F V+
Sbjct: 121 GEVSCARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVACVSPDGFSFPCVL 180
Query: 80 SSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVV 139
+CS L L G+++H ++ + G DV V + L+++Y++CG + + F +V
Sbjct: 181 KACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRTIV 240
Query: 140 LWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLM 199
W+S+I+ Y +G+ EA+ +F +M + + + VS+L A + E G +
Sbjct: 241 SWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCV 300
Query: 200 VKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+ K + + + L +CG++ A L N + I W ++S
Sbjct: 301 I-KMGLECEFDLLISLTSLYAKCGHV-MVARLFFNQVENPSLIFWNAMISG 349
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 68/151 (45%), Gaps = 1/151 (0%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F D++ +SL Y K GS+ V +P ++V+ W ++ G +G + + ++
Sbjct: 406 FRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFH 465
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
MR G P+ +TFV ++++C + +G + + G + ++ + R G
Sbjct: 466 AMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRMRDYGIEPRHQHYACVVDLLGRAG 525
Query: 122 CLDDSVKTFLECEY-SDVVLWSSMIAAYGFH 151
LD + + V +W ++++A H
Sbjct: 526 HLDRAYNFVMNMPIEPGVSVWGALLSACKIH 556
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 89/204 (43%), Gaps = 6/204 (2%)
Query: 68 FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV 127
F+PDK + S+I L QI+A+++ G +I+ L++ S G + +
Sbjct: 72 FKPDKF-YASLIDDSIHKTHL---NQIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCAR 127
Query: 128 KTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCG 187
K F + DV LW++++ Y HG AI ++ +M+ + +F +L ACS
Sbjct: 128 KLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVACVSPDGFSFPCVLKACSALP 187
Query: 188 LKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTL 247
E G + ++ + + +V L +CG + A A+ + V + W ++
Sbjct: 188 ALEMGRRVHG-QIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRL-VDRTIVSWTSI 245
Query: 248 LSACKTHKSTDMAGRIAEEILGVN 271
+S + A RI E+ N
Sbjct: 246 ISGYAQNGQPIEALRIFSEMRKTN 269
>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Glycine max]
Length = 711
Score = 331 bits (848), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 169/427 (39%), Positives = 257/427 (60%), Gaps = 15/427 (3%)
Query: 19 SGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSV 78
+G + + +V + M R+ W +I + G + L + M+ G + + +SV
Sbjct: 285 NGEVDKARRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRRMQREGLALNFPSLISV 344
Query: 79 ISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDV 138
+S C LA+L G+Q+HA++V++ D+ V S LI+MY +CG L + + F DV
Sbjct: 345 LSVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLKDV 404
Query: 139 VLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDL 198
V+W+SMI Y HG GEEA+N+F M +DVTF+ +L ACS+ G ++G+E F+
Sbjct: 405 VMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFET 464
Query: 199 MVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTD 258
M KY+ +P +EHY C+VDLLGR ++EA L+ MP++ +AI+W LL AC+TH D
Sbjct: 465 MKCKYQVEPGIEHYACLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGALLGACRTHMKLD 524
Query: 259 MAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIK 318
+A E++ + P++A PYVLLSN++A RW+ V RE ++ R+V K PG SW+E++
Sbjct: 525 LAEVAVEKLAQLEPKNAGPYVLLSNMYAYKGRWRDVEVLREKIKARSVTKLPGCSWIEVE 584
Query: 319 NQVHQFTMGD-KSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHS 377
+VH FT GD K HP I LE+L ++ GY PD +HD+D EEK ++L +HS
Sbjct: 585 KKVHMFTGGDSKGHPEQPIIMKMLEKLGGLLREAGYCPDGSFVLHDVDEEEKTHSLGYHS 644
Query: 378 EKLAIAFA--EHTRGLIVML------------PFKYISEIKNREIIVRDASRFHHFRNGK 423
EKLA+A+ + G+ + + K I+++ REII+RDA+RFHHF++G
Sbjct: 645 EKLAVAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIILRDANRFHHFKDGH 704
Query: 424 CSCGDYW 430
CSC DYW
Sbjct: 705 CSCKDYW 711
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 100/187 (53%), Gaps = 9/187 (4%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F+ DL S L MY+K G+LV ++V P+++V+ W ++I G +Q+GL E+ L+ ++
Sbjct: 369 FDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLKDVVMWNSMITGYSQHGLGEEALNVFH 428
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV--ISSLISMYSR 119
M G PD +TF+ V+S+CS + +G ++ E +K ++ G+ + L+ + R
Sbjct: 429 DMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELF-ETMKCKYQVEPGIEHYACLVDLLGR 487
Query: 120 CGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGK---GEEAINLFEQMEQKEFEANDVT 175
+++++K + D ++W +++ A H K E A+ Q+E K A
Sbjct: 488 ADQVNEAMKLVEKMPMEPDAIVWGALLGACRTHMKLDLAEVAVEKLAQLEPK--NAGPYV 545
Query: 176 FVSLLYA 182
+S +YA
Sbjct: 546 LLSNMYA 552
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 132/295 (44%), Gaps = 45/295 (15%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
+ V+ + L ++K+G L E +V MP RNV++W +++ G +NG D R
Sbjct: 85 NTVSWNGLISGHIKNGMLSEARRVFDTMPDRNVVSWTSMVRGYVRNG------DVAEAER 138
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIH--AEVVKAGASLDVGVISSLISMYSRCGC 122
+ P K +V+S L L Q ++ ++ DV ++++I Y G
Sbjct: 139 LFWHMPHK----NVVSWTVMLGGLLQEGRVDDARKLFDMMPEKDVVAVTNMIGGYCEEGR 194
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
LD++ F E +VV W++M++ Y +GK + A LFE M ++ N+V++ ++L
Sbjct: 195 LDEARALFDEMPKRNVVTWTAMVSGYARNGKVDVARKLFEVMPER----NEVSWTAMLLG 250
Query: 183 CSHCGLKEKGMEFFDLM--------------------VKKYRR-----KPRLE-HYTCVV 216
+H G + FD M V K RR K R ++ ++
Sbjct: 251 YTHSGRMREASSLFDAMPVKPVVVCNEMIMGFGLNGEVDKARRVFKGMKERDNGTWSAMI 310
Query: 217 DLLGRCGYLDEAAALIRNMPVKANAIIWKTL---LSACKTHKSTDMAGRIAEEIL 268
+ R GY EA L R M + A+ + +L LS C + S D ++ +++
Sbjct: 311 KVYERKGYELEALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQLV 365
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 141/312 (45%), Gaps = 14/312 (4%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E D+VA +++ Y + G L E + MP RNV+ W +++G A+NG + + +
Sbjct: 176 EKDVVAVTNMIGGYCEEGRLDEARALFDEMPKRNVVTWTAMVSGYARNGKVDVARKLFEV 235
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M +++++ +++ + + + + A V V + +I + G
Sbjct: 236 MP----ERNEVSWTAMLLGYTHSGRMREASSL----FDAMPVKPVVVCNEMIMGFGLNGE 287
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
+D + + F + D WS+MI Y G EA+ LF +M+++ N + +S+L
Sbjct: 288 VDKARRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRRMQREGLALNFPSLISVLSV 347
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
C + G + +V+ + L + ++ + +CG L A + P+K + +
Sbjct: 348 CVSLASLDHGKQVHAQLVRSEFDQD-LYVASVLITMYVKCGNLVRAKQVFNRFPLK-DVV 405
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+W ++++ H + A + ++ GV P D +LS S K +G+ F E
Sbjct: 406 MWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELF-ET 464
Query: 301 MRERNVKKEPGV 312
M+ + + EPG+
Sbjct: 465 MKCK-YQVEPGI 475
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 71/155 (45%), Gaps = 12/155 (7%)
Query: 111 SSLISMYSRCGCLDDSVKTFLECE--YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE 168
S I+ Y+R G LD + K F E + V W++M+AAY + EA+ LFE+M Q+
Sbjct: 26 SYAIACYARNGQLDHARKVFDETPLPHRTVSSWNAMVAAYFEARQPREALLLFEKMPQR- 84
Query: 169 FEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEA 228
N V++ L+ G+ + FD M + + +T +V R G + EA
Sbjct: 85 ---NTVSWNGLISGHIKNGMLSEARRVFDTMPDR-----NVVSWTSMVRGYVRNGDVAEA 136
Query: 229 AALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRI 263
L +MP K N + W +L D A ++
Sbjct: 137 ERLFWHMPHK-NVVSWTVMLGGLLQEGRVDDARKL 170
>gi|326519098|dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 331 bits (848), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 166/440 (37%), Positives = 257/440 (58%), Gaps = 15/440 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ GS+L MY + G + V + +N ++W LI+G A+ G E L + M
Sbjct: 186 DVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMTFAEML 245
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
GF T+ SV SS + L L QG+ +HA ++K+ + ++L+ MY++ G +
Sbjct: 246 RNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFAGNTLLDMYAKSGSMI 305
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D+ K F + D+V W++M+ A+ +G G+EA++ FE+M + N VTF+ +L ACS
Sbjct: 306 DARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQVTFLCILTACS 365
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL ++G +F++M K+Y +P ++H+ VV LLGR G L+ A I MP++ A +W
Sbjct: 366 HGGLVKEGKRYFEMM-KEYDLEPEIDHFVTVVALLGRAGLLNFALVFIFKMPIEPTAAVW 424
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
LL+AC+ HK+ + A+ + ++P D+ P VLL NI+AS +W + R M+
Sbjct: 425 GALLAACRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQWDAAARVRRIMKTT 484
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
VKKEP SW+E++N VH F D +HPR+ EI +++ +++ GYVPD + +
Sbjct: 485 GVKKEPACSWVEMENSVHMFVANDDTHPRAEEIYKMWGQISKKIRKEGYVPDMDYVLLRV 544
Query: 365 DSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNREIIV 410
D +E+E NL++HSEKLA+AFA E G + + FKYIS++ REI+V
Sbjct: 545 DDQEREANLQYHSEKLALAFALIEMPAGATIRIMKNIRICGDCHSAFKYISKVFGREIVV 604
Query: 411 RDASRFHHFRNGKCSCGDYW 430
RD +RFHHF NG CSC DYW
Sbjct: 605 RDTNRFHHFSNGSCSCADYW 624
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 132/249 (53%), Gaps = 2/249 (0%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F D +SL H+Y K GS++E KV M +++++W +LIAG AQN + E+ +
Sbjct: 82 FAGDAFLDNSLIHLYCKCGSVLEARKVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLP 141
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M F+P+ TF S++ + A G G+QIHA VK DV V S+L+ MY+RCG
Sbjct: 142 GMLKGRFKPNGFTFASLLKAAGAHADSGIGRQIHALAVKCDWHEDVYVGSALLDMYARCG 201
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+D + F + + + V W+++I+ + G GE A+ F +M + FEA T+ S+
Sbjct: 202 MMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMTFAEMLRNGFEATHFTYSSVFS 261
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
+ + G E+G M+K R+K ++D+ + G + +A + + K +
Sbjct: 262 SIARLGALEQGKWVHAHMIKS-RQKMTAFAGNTLLDMYAKSGSMIDARKVFDRVDDK-DL 319
Query: 242 IIWKTLLSA 250
+ W T+L+A
Sbjct: 320 VTWNTMLTA 328
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 4/198 (2%)
Query: 53 AEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISS 112
A VL +L+ P + + I++C++ L +++HA + + + D + +S
Sbjct: 32 ASAVLRDLDLLDAGELAPTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNS 91
Query: 113 LISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEAN 172
LI +Y +CG + ++ K F E D+V W+S+IA Y + EEAI L M + F+ N
Sbjct: 92 LIHLYCKCGSVLEARKVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPN 151
Query: 173 DVTFVSLLYACSHCGLKEKGMEFFDLMVK-KYRRKPRLEHYTCVVDLLGRCGYLDEAAAL 231
TF SLL A G + L VK + + + ++D+ RCG +D A A+
Sbjct: 152 GFTFASLLKAAGAHADSGIGRQIHALAVKCDWHEDVYVG--SALLDMYARCGMMDMATAV 209
Query: 232 IRNMPVKANAIIWKTLLS 249
+ K N + W L+S
Sbjct: 210 FDKLDSK-NGVSWNALIS 226
>gi|147806246|emb|CAN72195.1| hypothetical protein VITISV_014979 [Vitis vinifera]
Length = 558
Score = 331 bits (848), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 165/445 (37%), Positives = 259/445 (58%), Gaps = 15/445 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ D+ + L H Y G L K MP R++++W ++IA A+NG + L +
Sbjct: 114 GFDSDVYVQNGLIHFYGCCGFLDFALKAFEEMPERDLVSWSSMIACFAKNGFGYEALALF 173
Query: 61 NLMRMVG-FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
M++VG +PD++ +SV+S+ S L L G+ I + + G V + ++L+ M+SR
Sbjct: 174 QRMQLVGTVKPDEVIVLSVVSAISILGDLELGKWIRGFISRNGLEFTVSLGTALVDMFSR 233
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CGC+++S++ F E +V+ W+++I HG+ EA+ +F +M F+ + VTF +
Sbjct: 234 CGCIEESMRVFDEMGERNVLTWTALINGLAVHGRSAEALRMFYEMRNHGFQPDHVTFTGV 293
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L ACSH GL +G F+ + +Y +P EHY C+VDLLGR G L+EA + MP++
Sbjct: 294 LVACSHGGLVSEGWHVFESIRNEYGMEPLPEHYGCMVDLLGRAGLLNEACKFVDGMPIRP 353
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
N+IIW+TLL AC H ++A ++ E+I ++ YVLLSN++ RW + R
Sbjct: 354 NSIIWRTLLGACVNHNYIELAEKVKEKINELDSYHDGDYVLLSNVYGGVGRWAEKAGVRN 413
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
+MRE+ + K+PG S + + + +H+F GD +HP+ I +L + +K+ GY PD
Sbjct: 414 SMREKRISKKPGCSLINVNHLIHEFVAGDNNHPQFESIREFLVSMIDSLKVVGYTPDISN 473
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFA----EHTRGLIVMLPF----------KYISEIKN 405
+ D++ EEKE L +HSEKLA+AFA + +R + VM KY S++
Sbjct: 474 VLFDIEEEEKESTLGYHSEKLAVAFALLCFKDSRTIRVMKNLRICHDCHCFMKYASDVFE 533
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
REII+RD +RFHHF G CSC DYW
Sbjct: 534 REIIIRDRNRFHHFSKGSCSCRDYW 558
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 121/253 (47%), Gaps = 15/253 (5%)
Query: 20 GSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVI 79
SL + L+ + A+ T+I A + + + M M G PD TF V+
Sbjct: 36 ASLSYARSIFDLIAFPDTFAFNTIIRAHADSSPSFSLSLFSK-MTMAGVSPDHFTFPFVL 94
Query: 80 SSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVV 139
+C+ L T G +H+ + K G DV V + LI Y CG LD ++K F E D+V
Sbjct: 95 KACARLQT---GLDLHSLLFKLGFDSDVYVQNGLIHFYGCCGFLDFALKAFEEMPERDLV 151
Query: 140 LWSSMIAAYGFHGKGEEAINLFEQMEQ-KEFEANDVTFVSLLYACSHCGLKEKGMEFFDL 198
WSSMIA + +G G EA+ LF++M+ + ++V +S++ A S G E G
Sbjct: 152 SWSSMIACFAKNGFGYEALALFQRMQLVGTVKPDEVIVLSVVSAISILGDLELGK----- 206
Query: 199 MVKKYRRKPRLEHY----TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
++ + + LE T +VD+ RCG ++E+ + M + N + W L++ H
Sbjct: 207 WIRGFISRNGLEFTVSLGTALVDMFSRCGCIEESMRVFDEMGER-NVLTWTALINGLAVH 265
Query: 255 KSTDMAGRIAEEI 267
+ A R+ E+
Sbjct: 266 GRSAEALRMFYEM 278
>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 937
Score = 331 bits (848), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 169/444 (38%), Positives = 258/444 (58%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE D +SL MY K G L + + + RN+I W ++A A +G E+VL
Sbjct: 494 GFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLV 553
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ MR G D+ +F +S+ ++LA L +GQQ+H VK G D + ++ MYS+C
Sbjct: 554 SKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKC 613
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + VK + W+ +I+A G HG EE F +M + + VTFVSLL
Sbjct: 614 GEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLL 673
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL +KG+ ++D++ + + +P +EH CV+DLLGR G L EA I MP+K N
Sbjct: 674 TACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPN 733
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
++W++LL++CK H + D + AE + + P+D + YVL SN+ A+ RW+ V R+
Sbjct: 734 DLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQ 793
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M +N+KK+ SW+++K++V F +GD++HP++MEI LE++ +K GYV DT
Sbjct: 794 MGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQA 853
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNR 406
+ D D E+KE+NL +HSE+LA+A+A G V + +K++S + R
Sbjct: 854 LQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGR 913
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
I++RD RFHHF G CSC DYW
Sbjct: 914 RIVLRDQYRFHHFERGLCSCKDYW 937
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 152/321 (47%), Gaps = 19/321 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + + G++L MY K G + E +V+ MP R+V+AW LI G A++ + L +
Sbjct: 392 GLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAF 451
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATL-GQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
MR+ G + IT VSV+S+C L +G+ +HA +V AG D V +SLI+MY++
Sbjct: 452 QTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAK 511
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG L S F + +++ W++M+AA HG GEE + L +M + +F
Sbjct: 512 CGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEG 571
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEH----YTCVVDLLGRCGYLDEAAALIRNM 235
L A + + E+G + L V K EH + D+ +CG + E +++ +
Sbjct: 572 LSAAAKLAVLEEGQQLHGLAV-----KLGFEHDSFIFNAAADMYSKCGEIGE---VVKML 623
Query: 236 PVKANAII--WKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRW 291
P N + W L+SA H + E+L G+ P LL+
Sbjct: 624 PPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVD 683
Query: 292 QGVSEFREAMRERNVKKEPGV 312
+G++ + M R+ EP +
Sbjct: 684 KGLAYYD--MIARDFGLEPAI 702
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 129/272 (47%), Gaps = 11/272 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D+ +++ H+Y G + KV MP RNV++W +L+ G + G E+V+D Y
Sbjct: 89 GLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIY 148
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
MR G ++ + VISSC L G+QI +VVK+G + V +SLISM
Sbjct: 149 KGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSM 208
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +D + F + D + W+S+ AAY +G EE+ +F M + E N T +LL
Sbjct: 209 GNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLL 268
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGR----CGYLDEAAALIRNMP 236
H ++ G L+VK + CV + L R G EA + + MP
Sbjct: 269 SVLGHVDHQKWGRGIHGLVVKM-----GFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP 323
Query: 237 VKANAIIWKTLLSA-CKTHKSTDMAGRIAEEI 267
K + I W +L+++ +S D G + I
Sbjct: 324 TK-DLISWNSLMASFVNDGRSLDALGLLCSMI 354
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 124/256 (48%), Gaps = 5/256 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ + ++L MY +G VE V + MP +++I+W +L+A +G + D L
Sbjct: 291 GFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLL 350
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G + +TF S +++C +G+ +H VV +G + + ++L+SMY +
Sbjct: 351 CSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKI 410
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + +S + L+ DVV W+++I Y ++A+ F+ M + +N +T VS+L
Sbjct: 411 GEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVL 470
Query: 181 YACSHCG-LKEKGMEFFDLMVKKYRRKPRLEHY-TCVVDLLGRCGYLDEAAALIRNMPVK 238
AC G L E+G +V EH ++ + +CG L + L + +
Sbjct: 471 SACLLPGDLLERGKPLHAYIVSAGFESD--EHVKNSLITMYAKCGDLSSSQDLFNGLDNR 528
Query: 239 ANAIIWKTLLSACKTH 254
N I W +L+A H
Sbjct: 529 -NIITWNAMLAANAHH 543
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 124/250 (49%), Gaps = 3/250 (1%)
Query: 15 MYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKIT 74
MY K G + + +MP+RN ++W T+++G + GL + ++ + M +G +P
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 75 FVSVISSCSELATL-GQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLEC 133
S++++C ++ +G Q+H V K+G DV V ++++ +Y G + S K F E
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 134 EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGM 193
+VV W+S++ Y G+ EE I++++ M + N+ + ++ +C + G
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180
Query: 194 EFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKT 253
+ +VK + +L ++ +LG G +D A + M + + I W ++ +A
Sbjct: 181 QIIGQVVKS-GLESKLAVENSLISMLGSMGNVDYANYIFDQMSER-DTISWNSIAAAYAQ 238
Query: 254 HKSTDMAGRI 263
+ + + RI
Sbjct: 239 NGHIEESFRI 248
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 116/260 (44%), Gaps = 2/260 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E L +SL M G++ + M R+ I+W ++ A AQNG E+ +
Sbjct: 190 GLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIF 249
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+LMR + T +++S + G+ IH VVK G V V ++L+ MY+
Sbjct: 250 SLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGA 309
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ F + D++ W+S++A++ G+ +A+ L M N VTF S L
Sbjct: 310 GRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSAL 369
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC EKG L+V ++ +V + G+ G + E+ ++ MP + +
Sbjct: 370 AACFTPDFFEKGRILHGLVVVSGLFYNQIIG-NALVSMYGKIGEMSESRRVLLQMP-RRD 427
Query: 241 AIIWKTLLSACKTHKSTDMA 260
+ W L+ + D A
Sbjct: 428 VVAWNALIGGYAEDEDPDKA 447
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 331 bits (848), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 171/440 (38%), Positives = 259/440 (58%), Gaps = 15/440 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ +SL MY K + + + + + +++W +I G AQNG + L+ + M+
Sbjct: 266 DVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQ 325
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+PD T VSVI + +EL+ Q + IH V++ +V V+++L+ MY++CG +
Sbjct: 326 SRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIH 385
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ K F V+ W++MI YG HG G+ ++ LF++M++ + ND+TF+ L ACS
Sbjct: 386 TARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACS 445
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL E+G+ FF+ M K Y +P ++HY +VDLLGR G L++A I+ MP+K ++
Sbjct: 446 HSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGITVY 505
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
+L ACK HK+ D+ + A EI +NP D +VLL+NI+A+A W V++ R M +
Sbjct: 506 GAMLGACKIHKNVDLGEKAAFEIFKLNPDDGGYHVLLANIYATASMWGKVAKVRTIMEKS 565
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
++K PG S +EI N+VH F G SHP+S +I YLE L E++ GYVPDT + +HD+
Sbjct: 566 GLQKTPGCSLVEIGNEVHSFYSGTTSHPQSKKIYSYLETLVDEIRAAGYVPDTNS-IHDV 624
Query: 365 DSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNREIIV 410
+ + K L HSEKLAIAF + G + + KYIS + REIIV
Sbjct: 625 EDDVKVQLLNTHSEKLAIAFGLLNTSTGTPIHIRKNLRVCGDCHNATKYISLVTGREIIV 684
Query: 411 RDASRFHHFRNGKCSCGDYW 430
RD RFH F++G CSCGDYW
Sbjct: 685 RDMHRFHLFKDGVCSCGDYW 704
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 132/255 (51%), Gaps = 5/255 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF +L A + + +MY K + + + MP R+++ W T+I+G AQNG A+ L
Sbjct: 60 GFSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLV 119
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G RPD IT VS++ + ++ L G +H V++AG V V ++L+ MYS+C
Sbjct: 120 LRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKC 179
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + F ++ VV W+SMI Y G E A+ +F++M + + +VT + L
Sbjct: 180 GSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGAL 239
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA- 239
+AC+ G E+G +F +V + + + ++ + +C +D AA + +N+ K
Sbjct: 240 HACADLGDLERG-KFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTL 298
Query: 240 ---NAIIWKTLLSAC 251
NA+I + C
Sbjct: 299 VSWNAMILGYAQNGC 313
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 148/305 (48%), Gaps = 5/305 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE + ++L MY K GS+ + M R V++W ++I G Q+G AE + +
Sbjct: 161 GFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIF 220
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G +P +T + + +C++L L +G+ +H V + DV V++SLISMYS+C
Sbjct: 221 QKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKC 280
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
+D + F +V W++MI Y +G EA+N F +M+ + + + T VS++
Sbjct: 281 KRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVI 340
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
A + + + L+++++ K + T +VD+ +CG + A L M + +
Sbjct: 341 PALAELSIPRQAKWIHGLVIRRFLDK-NVFVMTALVDMYAKCGAIHTARKLFDMMNAR-H 398
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
I W ++ TH + + +E+ + P D LS S +G+ F
Sbjct: 399 VITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLC-FF 457
Query: 299 EAMRE 303
E+M++
Sbjct: 458 ESMKK 462
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 120/252 (47%), Gaps = 15/252 (5%)
Query: 43 LIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAG 102
++ G A++ + L ++ M+ RP F ++ C + + L +G++IH V+ +G
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60
Query: 103 ASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFE 162
S ++ ++ +++MY++C ++D+ F D+V W++MI+ Y +G + A+ L
Sbjct: 61 FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120
Query: 163 QMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY----TCVVDL 218
+M ++ + +T VS+L A + L GM V Y + E T +VD+
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIGMA-----VHGYVLRAGFESLVNVSTALVDM 175
Query: 219 LGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAA 276
+CG + A + M + + W +++ + A I +++L GV P +
Sbjct: 176 YSKCGSVSIARVIFDGMDHRT-VVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVT 234
Query: 277 PYVLLSNIHASA 288
++ +HA A
Sbjct: 235 ---VMGALHACA 243
>gi|326520445|dbj|BAK07481.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 596
Score = 331 bits (848), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 172/443 (38%), Positives = 257/443 (58%), Gaps = 27/443 (6%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPI--RNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVG 67
+SL H Y G +V +P+ RN+++W +++ G A NG +VL +
Sbjct: 159 NSLVHHYGACGLFESAHRVFDEIPVLERNLVSWNSVMNGFAANGRPNEVLTIFRETLEAD 218
Query: 68 FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV 127
PD T VSV+++C+E+ L G+++H K G + V ++LI +Y++CG ++D+
Sbjct: 219 LMPDGFTIVSVLTACAEIGALTLGRRVHVFASKVGLVGNSHVGNALIDLYAKCGGVEDAW 278
Query: 128 KTFLECEYS-DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHC 186
K F E + VV W+S+I +G G++A+ LF ME++ D+T V +LYACSHC
Sbjct: 279 KVFEEMGVARTVVSWTSLIVGLAGNGFGKDALELFGLMERERLIPTDITMVGVLYACSHC 338
Query: 187 GLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKT 246
GL + G +F+ M KY P +EH C+VDLLGR G ++EA I MPV+ NA++W+T
Sbjct: 339 GLVDDGFRYFNEMQDKYGIAPGIEHLGCMVDLLGRAGRVEEAHNYITTMPVEPNAVVWRT 398
Query: 247 LLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNV 306
LL AC HK ++ ++ ++P + YVLLSN++A+ RW R+ M V
Sbjct: 399 LLGACAMHKKLELGEAAWARLVELDPGHSGDYVLLSNLYAAVGRWADAHVLRKTMATHGV 458
Query: 307 KKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDS 366
+K PG S +E++N V++F MGD+SHP S +I L E+ ++ +GYVP T + D++
Sbjct: 459 RKNPGHSLVELRNSVYEFVMGDRSHPESDQIYQTLAEIAERLRCQGYVPRTSNVLADIEE 518
Query: 367 EEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNRE 407
EEKE L +HSE+LAIAFA L+ LP K IS++ +RE
Sbjct: 519 EEKETALNYHSERLAIAFA-----LLKSLPGSPIRIVKNLRMCGDCHLVIKLISKVYDRE 573
Query: 408 IIVRDASRFHHFRNGKCSCGDYW 430
IIVRD SRFHHF+ G+CSC DYW
Sbjct: 574 IIVRDRSRFHHFKGGECSCKDYW 596
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 85/181 (46%), Gaps = 3/181 (1%)
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
PD T+ ++ +C+ L L +G+ +HAE K G V V +SL+ Y CG + + +
Sbjct: 118 PDTHTYPPLLQACTRLLALREGESLHAEAAKNGLVALVFVKNSLVHHYGACGLFESAHRV 177
Query: 130 FLECEY--SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCG 187
F E ++V W+S++ + +G+ E + +F + + + + T VS+L AC+ G
Sbjct: 178 FDEIPVLERNLVSWNSVMNGFAANGRPNEVLTIFRETLEADLMPDGFTIVSVLTACAEIG 237
Query: 188 LKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTL 247
G + K ++DL +CG +++A + M V + W +L
Sbjct: 238 ALTLGRR-VHVFASKVGLVGNSHVGNALIDLYAKCGGVEDAWKVFEEMGVARTVVSWTSL 296
Query: 248 L 248
+
Sbjct: 297 I 297
>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
Length = 1027
Score = 330 bits (847), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 169/444 (38%), Positives = 258/444 (58%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE D +SL MY K G L + + + RN+I W ++A A +G E+VL
Sbjct: 584 GFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLV 643
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ MR G D+ +F +S+ ++LA L +GQQ+H VK G D + ++ MYS+C
Sbjct: 644 SKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKC 703
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + VK + W+ +I+A G HG EE F +M + + VTFVSLL
Sbjct: 704 GEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLL 763
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL +KG+ ++D++ + + +P +EH CV+DLLGR G L EA I MP+K N
Sbjct: 764 TACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPN 823
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
++W++LL++CK H + D + AE + + P+D + YVL SN+ A+ RW+ V R+
Sbjct: 824 DLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQ 883
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M +N+KK+ SW+++K++V F +GD++HP++MEI LE++ +K GYV DT
Sbjct: 884 MGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQA 943
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNR 406
+ D D E+KE+NL +HSE+LA+A+A G V + +K++S + R
Sbjct: 944 LQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGR 1003
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
I++RD RFHHF G CSC DYW
Sbjct: 1004 RIVLRDQYRFHHFERGLCSCKDYW 1027
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 152/321 (47%), Gaps = 19/321 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + + G++L MY K G + E +V+ MP R+V+AW LI G A++ + L +
Sbjct: 482 GLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAF 541
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATL-GQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
MR+ G + IT VSV+S+C L +G+ +HA +V AG D V +SLI+MY++
Sbjct: 542 QTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAK 601
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG L S F + +++ W++M+AA HG GEE + L +M + +F
Sbjct: 602 CGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEG 661
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEH----YTCVVDLLGRCGYLDEAAALIRNM 235
L A + + E+G + L VK EH + D+ +CG + E +++ +
Sbjct: 662 LSAAAKLAVLEEGQQLHGLAVKL-----GFEHDSFIFNAAADMYSKCGEIGE---VVKML 713
Query: 236 PVKANAII--WKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRW 291
P N + W L+SA H + E+L G+ P LL+
Sbjct: 714 PPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVD 773
Query: 292 QGVSEFREAMRERNVKKEPGV 312
+G++ + M R+ EP +
Sbjct: 774 KGLAYYD--MIARDFGLEPAI 792
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 124/256 (48%), Gaps = 5/256 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ + ++L MY +G VE V + MP +++I+W +L+A +G + D L
Sbjct: 381 GFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLL 440
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G + +TF S +++C +G+ +H VV +G + + ++L+SMY +
Sbjct: 441 CSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKI 500
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + +S + L+ DVV W+++I Y ++A+ F+ M + +N +T VS+L
Sbjct: 501 GEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVL 560
Query: 181 YACSHCG-LKEKGMEFFDLMVKKYRRKPRLEHY-TCVVDLLGRCGYLDEAAALIRNMPVK 238
AC G L E+G +V EH ++ + +CG L + L + +
Sbjct: 561 SACLLPGDLLERGKPLHAYIVSAGFESD--EHVKNSLITMYAKCGDLSSSQDLFNGLDNR 618
Query: 239 ANAIIWKTLLSACKTH 254
N I W +L+A H
Sbjct: 619 -NIITWNAMLAANAHH 633
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 118/272 (43%), Gaps = 36/272 (13%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D+ +++ H+Y G + KV MP RNV++W +L+ G + G E+V+D Y
Sbjct: 204 GLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIY 263
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ G+QI +VVK+G + V +SLISM
Sbjct: 264 KDESL-------------------------GRQIIGQVVKSGLESKLAVENSLISMLGSM 298
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +D + F + D + W+S+ AAY +G EE+ +F M + E N T +LL
Sbjct: 299 GNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLL 358
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGR----CGYLDEAAALIRNMP 236
H ++ G L+VK + CV + L R G EA + + MP
Sbjct: 359 SVLGHVDHQKWGRGIHGLVVKM-----GFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP 413
Query: 237 VKANAIIWKTLLSA-CKTHKSTDMAGRIAEEI 267
K + I W +L+++ +S D G + I
Sbjct: 414 TK-DLISWNSLMASFVNDGRSLDALGLLCSMI 444
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 89/160 (55%), Gaps = 1/160 (0%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
L ++ ++L +MY K G + + +MP+RN ++W T+++G + GL + ++ + M
Sbjct: 105 LSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKM 164
Query: 64 RMVGFRPDKITFVSVISSCSELATL-GQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
+G +P S++++C ++ +G Q+H V K+G DV V ++++ +Y G
Sbjct: 165 CDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGL 224
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFE 162
+ S K F E +VV W+S++ Y G+ EE I++++
Sbjct: 225 VSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYK 264
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 116/260 (44%), Gaps = 2/260 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E L +SL M G++ + M R+ I+W ++ A AQNG E+ +
Sbjct: 280 GLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIF 339
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+LMR + T +++S + G+ IH VVK G V V ++L+ MY+
Sbjct: 340 SLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGA 399
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ F + D++ W+S++A++ G+ +A+ L M N VTF S L
Sbjct: 400 GRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSAL 459
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC EKG L+V ++ +V + G+ G + E+ ++ MP + +
Sbjct: 460 AACFTPDFFEKGRILHGLVVVSGLFYNQIIG-NALVSMYGKIGEMSESRRVLLQMP-RRD 517
Query: 241 AIIWKTLLSACKTHKSTDMA 260
+ W L+ + D A
Sbjct: 518 VVAWNALIGGYAEDEDPDKA 537
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 73/167 (43%), Gaps = 3/167 (1%)
Query: 83 SELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWS 142
S++ G+ +HA VK L V ++LI+MY++ G + + F + V W+
Sbjct: 83 SQITIETTGRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWN 142
Query: 143 SMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCG-LKEKGMEFFDLMVK 201
+M++ G E + F +M + + SL+ AC G + +G++ V
Sbjct: 143 TMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGF-VA 201
Query: 202 KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
K + T ++ L G G + + + MP + N + W +L+
Sbjct: 202 KSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDR-NVVSWTSLM 247
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 330 bits (847), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 169/444 (38%), Positives = 258/444 (58%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D + L Y K L KV N+IA+ ++I +Q ED + +
Sbjct: 436 GFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLF 495
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G PD S++++C+ L+ QG+Q+HA ++K DV ++L+ Y++C
Sbjct: 496 MEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKC 555
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++D+ F VV WS+MI HG G+ A+++F +M + N +T S+L
Sbjct: 556 GSIEDADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVL 615
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+H GL ++ +F M + + EHY+C++DLLGR G LD+A L+ +MP +AN
Sbjct: 616 CACNHAGLVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEAN 675
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A +W LL+A + H+ ++ AE++ + P+ + +VLL+N +ASA W V++ R+
Sbjct: 676 AAVWGALLAASRVHRDPELGKLAAEKLFVLEPEKSGTHVLLANTYASAGMWDEVAKVRKL 735
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M++ VKKEP +SW+E+K++VH F +GDKSHPR+ +I LEEL M GYVP+ D
Sbjct: 736 MKDSKVKKEPAMSWVELKDRVHTFIVGDKSHPRARDIYAKLEELGDLMSKAGYVPNLEVD 795
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA----------EHTRGLIVM----LPFKYISEIKNR 406
+HD+D EKE L HHSE+LA+AFA + L + + FK+IS+I +R
Sbjct: 796 LHDVDKSEKELLLSHHSERLAVAFALISTPAGAPIRVKKNLRICRDCHVAFKFISKIVSR 855
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EII+RD +RFHHF +G CSCGDYW
Sbjct: 856 EIIIRDINRFHHFSDGACSCGDYW 879
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 127/269 (47%), Gaps = 10/269 (3%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G +L MY K G L + KV +P ++++ W LI+G + G + L + MR G
Sbjct: 343 GVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGS 402
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
++ T +V+ S + L + Q+HA K G D V++ LI Y +C CL + K
Sbjct: 403 DINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANK 462
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F E +++ ++SMI A GE+AI LF +M +K E + SLL AC+
Sbjct: 463 VFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSA 522
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHY--TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKT 246
E+G + ++K RK + + +V +CG +++A +P K + W
Sbjct: 523 YEQGKQVHAHLIK---RKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLPDKG-VVSWSA 578
Query: 247 LLSACKTH----KSTDMAGRIAEEILGVN 271
++ H ++ D+ R+ +E + N
Sbjct: 579 MIGGLAQHGHGKRALDVFRRMVDERIAPN 607
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 121/256 (47%), Gaps = 9/256 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVI-RLMPIRNVIAWITLIAGKAQNGLAEDVLDQ 59
G D+ ++L MY G + E +V RN ++W +++ +N D ++
Sbjct: 130 GLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVEL 189
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ M G RP++ F V+++C+ L G+++HA VV+ G DV ++L+ MYS+
Sbjct: 190 FGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSK 249
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G + + F + +DVV W++ I+ HG + A+ L QM+ N T S+
Sbjct: 250 LGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSI 309
Query: 180 L--YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV--VDLLGRCGYLDEAAALIRNM 235
L A + G G + M+K + Y V VD+ + G LD+A + +
Sbjct: 310 LKACAGAGAGAFALGRQIHGFMIKACADS---DDYIGVALVDMYAKYGLLDDARKVFEWI 366
Query: 236 PVKANAIIWKTLLSAC 251
P K + ++W L+S C
Sbjct: 367 PRK-DLLLWNALISGC 381
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 105/218 (48%), Gaps = 6/218 (2%)
Query: 38 IAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAE 97
++W +L+ + N L + L + MR G R ++ + ++ C+ A G G Q+HA
Sbjct: 69 VSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFA-LPIVLKCAPDA--GLGVQVHAV 125
Query: 98 VVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYS-DVVLWSSMIAAYGFHGKGEE 156
V G S D+ V ++L++MY G +D++ + F E + V W+ M++A+ + + +
Sbjct: 126 AVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSD 185
Query: 157 AINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVV 216
A+ LF +M N+ F ++ AC+ E G + ++V+ K +V
Sbjct: 186 AVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFT-ANALV 244
Query: 217 DLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
D+ + G + AA + +P K + + W +S C H
Sbjct: 245 DMYSKLGDIHMAALVFGKVP-KTDVVSWNAFISGCVLH 281
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 93/182 (51%), Gaps = 2/182 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G++ D+ ++L MY K G + V +P +V++W I+G +G + L+
Sbjct: 232 GYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELL 291
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQG--QQIHAEVVKAGASLDVGVISSLISMYS 118
M+ G P+ T S++ +C+ +QIH ++KA A D + +L+ MY+
Sbjct: 292 LQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYA 351
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+ G LDD+ K F D++LW+++I+ G E+++LF +M ++ + N T +
Sbjct: 352 KYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAA 411
Query: 179 LL 180
+L
Sbjct: 412 VL 413
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 88/207 (42%), Gaps = 10/207 (4%)
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P+ I+ +++ + +L G IHA ++K+G L + L+S YS+C + +
Sbjct: 4 PESIS--PLLTRYAATQSLFLGAHIHAHLLKSG--LLHAFRNHLLSFYSKCRLPGSARRV 59
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F E V WSS++ AY + EA+ F M + N+ +L GL
Sbjct: 60 FDETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKCAPDAGL- 118
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
G++ + V + +V + G G++DEA + NA+ W ++S
Sbjct: 119 --GVQVHAVAVST-GLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMS 175
Query: 250 A-CKTHKSTDMAGRIAEEIL-GVNPQD 274
A K + +D E + GV P +
Sbjct: 176 AFVKNDRCSDAVELFGEMVWSGVRPNE 202
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 330 bits (847), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 169/440 (38%), Positives = 253/440 (57%), Gaps = 15/440 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+V+ +S +++ L E M R+ ++W T+I+ A + + + + M
Sbjct: 484 DIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMF 543
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
P+ ++ C L GQQIH +K G ++ V ++LISMY +CGC D
Sbjct: 544 CEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGCAD 603
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
S + F E D+ W+++I Y HG G EAI +++ ME N+VTFV LL ACS
Sbjct: 604 -SRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACS 662
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL ++G +FF M + Y P EHY C+VDLLGR G + A I +MP++ + +IW
Sbjct: 663 HAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIW 722
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
LL ACK HK+ ++ R AE++ + P +A YV+LSNI++S W V+E R+ M+++
Sbjct: 723 SALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQ 782
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
V KEPG SW +IK+++H F GDK H + EI LEEL + +K GYVPDT +HD+
Sbjct: 783 GVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLEELYTLLKATGYVPDTEFVLHDI 842
Query: 365 DSEEKEYNLKHHSEKLAIAFA--EHTRGLIVMLP------------FKYISEIKNREIIV 410
D E+KE +L +HSEKLA+A+ +G+ + + K++S + R+I +
Sbjct: 843 DEEQKESSLLYHSEKLAVAYCLLATPKGMPIQILKNLRICGDCHTFIKFVSHVTKRQIDI 902
Query: 411 RDASRFHHFRNGKCSCGDYW 430
RD +RFHHFRNG CSC D+W
Sbjct: 903 RDGNRFHHFRNGSCSCEDFW 922
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 113/220 (51%), Gaps = 8/220 (3%)
Query: 6 LVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRM 65
+V+ ++L YM++G + E +++ MP RN I+W +IAG AQNG +E+ L +
Sbjct: 353 VVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHR 412
Query: 66 VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD 125
G P + S+ +CS + L G Q+H+ VK G + ++LI+MY +C ++
Sbjct: 413 SGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEY 472
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
+ + F D+V W+S +AA + +EA N F+ M ++ DV++ +++ A +H
Sbjct: 473 ARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRD----DVSWTTIISAYAH 528
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYL 225
+ M F M ++ L + + LLG CG L
Sbjct: 529 AEQSNEAMGAFKTMFCEH----ELPNSPILTILLGVCGSL 564
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 120/264 (45%), Gaps = 11/264 (4%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ + +S+ Y S +V+ + MP RN+++W +I+G + D + M
Sbjct: 157 DVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMH 216
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR-CGCL 123
G PD+ F S +S+ L L + + +K G DV + ++++++YSR L
Sbjct: 217 REGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVL 276
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
D ++K F + WS+MIAA G+ + AI ++E+ K +L+
Sbjct: 277 DTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACR----TALITGL 332
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
+ CG + F+ + +P + + ++ + G ++EA L MP + N I
Sbjct: 333 AQCGRIDDARILFEQI-----PEPIVVSWNALITGYMQNGMVNEAKELFDKMPFR-NTIS 386
Query: 244 WKTLLSACKTHKSTDMAGRIAEEI 267
W +++ + ++ A + +E+
Sbjct: 387 WAGMIAGYAQNGRSEEALGLLQEL 410
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 145/316 (45%), Gaps = 23/316 (7%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGE-KVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQ 59
GFE D+V G+++ ++Y + S+++ K M RN W T+IA + G + +
Sbjct: 254 GFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAV 313
Query: 60 Y--NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMY 117
Y + ++ + R IT ++ + L +QI +V + ++LI+ Y
Sbjct: 314 YERDPVKSIACRTALITGLAQCGRIDDARIL--FEQIPEPIVVS--------WNALITGY 363
Query: 118 SRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
+ G ++++ + F + + + + W+ MIA Y +G+ EEA+ L +++ + + +
Sbjct: 364 MQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLT 423
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC--VVDLLGRCGYLDEAAALIRNM 235
S+ +ACS+ E G + L VK + + C ++ + G+C ++ A + M
Sbjct: 424 SIFFACSNIVALETGTQVHSLAVKV---GCQFNSFACNALITMYGKCRNMEYARQVFSRM 480
Query: 236 PVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRW-QGV 294
K + + W + L+A + D A + +L +D + + + +A A++ + +
Sbjct: 481 VTK-DIVSWNSFLAALVQNDLLDEARNTFDNML---SRDDVSWTTIISAYAHAEQSNEAM 536
Query: 295 SEFREAMRERNVKKEP 310
F+ E + P
Sbjct: 537 GAFKTMFCEHELPNSP 552
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 98/226 (43%), Gaps = 17/226 (7%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
EL++ S+ + G + E +V MP R++IAW ++I+ NG+ + D Y+
Sbjct: 31 ELEVSGCSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDA 90
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
+ R I ++S L + + +++ +++ + +++IS Y + G
Sbjct: 91 ISGGNMRTGAI----LLSGYGRLGRVLEARRVFDGMLER----NTVAWNAMISCYVQNGD 142
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
+ + + F DV W+SM+ Y + +A NLFE+M ++ VS
Sbjct: 143 ITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPER-------NLVSWTVM 195
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRK--PRLEHYTCVVDLLGRCGYLD 226
S G E + +D+ K +R P ++ + + G LD
Sbjct: 196 ISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLD 241
>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 579
Score = 330 bits (847), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 166/446 (37%), Positives = 265/446 (59%), Gaps = 26/446 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E D+ S+L ++ K G + V M + I W ++I G AQN ++ L+ +
Sbjct: 141 GLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELF 200
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ GF ++ T SV+ +C+ LA L G Q H +VK L + ++L+ MY +C
Sbjct: 201 KRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILN--NALVDMYCKC 258
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L+D+ + F + + DV+ WS+MI+ +G +EA+ LFE M+ + N +T V +L
Sbjct: 259 GSLEDARRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFELMKSSGTKPNYITIVGVL 318
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
+ACSH GL E G +F M K Y P EHY C++DLLG+ G LD+A L+ M + +
Sbjct: 319 FACSHAGLLEDGWYYFRSMKKLYGINPGREHYGCMIDLLGKAGKLDDAVKLLNEMECEPD 378
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A+ W+TLL AC+ ++ +A A++++ ++P+DA Y +LSNI+A++++W V E R+
Sbjct: 379 AVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTVLSNIYANSQKWDSVEEIRKR 438
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
MR+ +KKEPG SW+E+ Q+H F +GD+SHP+ +E++ L +L + GYVP+T
Sbjct: 439 MRDIGIKKEPGCSWIEVNKQIHAFIIGDESHPQIVEVNKKLNQLIHRLIGIGYVPETNFV 498
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPFKYI-------------------S 401
+ D++ E+ E +L+HHSEKLA+AF GL+ + K I S
Sbjct: 499 LQDLEGEQMEDSLRHHSEKLALAF-----GLMTLPSEKVIRIRKNLRICGDCHVFCKLAS 553
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCG 427
+++NR I++RD R+HHF++GKCSCG
Sbjct: 554 KLENRNIVIRDPIRYHHFQDGKCSCG 579
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 139/254 (54%), Gaps = 7/254 (2%)
Query: 12 LAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPD 71
L +MY+K L + ++ MP RNVI+W T+I+ ++ + + L+ LM G RP+
Sbjct: 54 LINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPN 113
Query: 72 KITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFL 131
T+ SV+ +C+ ++ + + +H ++K G DV V S+LI ++++ G +D++ F
Sbjct: 114 VYTYSSVLRACNGMSDV---RMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFD 170
Query: 132 ECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEK 191
E D ++W+S+I + + + + A+ LF++M++ F A T S+L AC+ L E
Sbjct: 171 EMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLEL 230
Query: 192 GMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSAC 251
GM+ + + KY + L + +VD+ +CG L++A + M + + I W T++S
Sbjct: 231 GMQAH-VHIVKYDQDLILNN--ALVDMYCKCGSLEDARRVFNQMKER-DVITWSTMISGL 286
Query: 252 KTHKSTDMAGRIAE 265
+ + A ++ E
Sbjct: 287 AQNGYSQEALKLFE 300
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 97/202 (48%), Gaps = 21/202 (10%)
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
G D T+ +I C + +G I + G + +++ LI+MY + L+D+
Sbjct: 8 GLWADSATYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFNLLNDA 67
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS-- 184
+ F + +V+ W++MI+AY ++A+ L M + N T+ S+L AC+
Sbjct: 68 HQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRACNGM 127
Query: 185 ------HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
HCG+ ++G+E D+ V+ + ++D+ + G ++A ++ M V
Sbjct: 128 SDVRMLHCGIIKEGLE-SDVYVR-----------SALIDVFAKLGEPEDALSVFDEM-VT 174
Query: 239 ANAIIWKTLLSACKTHKSTDMA 260
+AI+W +++ + +D+A
Sbjct: 175 GDAIVWNSIIGGFAQNSRSDVA 196
>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g49142
gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
Length = 686
Score = 330 bits (847), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 163/418 (38%), Positives = 252/418 (60%), Gaps = 19/418 (4%)
Query: 32 MPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQG 91
M +++++W +I +N + + ++ Y+ M GF PD ++ SV+ +C + + L G
Sbjct: 269 MGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLG 328
Query: 92 QQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFH 151
++IH + + ++ + ++LI MY++CGCL+ + F + DVV W++MI+AYGF
Sbjct: 329 KKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFS 388
Query: 152 GKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEH 211
G+G +A+ LF +++ + + FV+ L ACSH GL E+G F LM Y+ PRLEH
Sbjct: 389 GRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEH 448
Query: 212 YTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVN 271
C+VDLLGR G + EA I++M ++ N +W LL AC+ H TD+ A+++ +
Sbjct: 449 LACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLA 508
Query: 272 PQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSH 331
P+ + YVLLSNI+A A RW+ V+ R M+ + +KK PG S +E+ +H F +GD+SH
Sbjct: 509 PEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSH 568
Query: 332 PRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFA------ 385
P+S EI L+ L +MK GYVPD+ + +HD++ E+KE +L HSEKLAI FA
Sbjct: 569 PQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKE 628
Query: 386 --EHTRGLIVM-----------LPFKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
E + I + + K IS+I +REII+RD +RFH FR G CSCGDYW
Sbjct: 629 EEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 134/313 (42%), Gaps = 18/313 (5%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G L Y + KV +P RNVI +I NG + + + M
Sbjct: 77 GVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNV 136
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
RPD TF V+ +CS T+ G++IH K G S + V + L+SMY +CG L ++
Sbjct: 137 RPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARL 196
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
E DVV W+S++ Y + + ++A+ + +ME + + T SLL A S+
Sbjct: 197 VLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT-T 255
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV---KANAIIWK 245
E M D+ K ++ L + ++ + + EA L M + +A+
Sbjct: 256 TENVMYVKDMFFKMGKKS--LVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSIT 313
Query: 246 TLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSN----IHASAKRWQGVSEFREAM 301
++L AC + + +I I + P +LL N ++A + + E M
Sbjct: 314 SVLPACGDTSALSLGKKIHGYI---ERKKLIPNLLLENALIDMYAKCGCLEKARDVFENM 370
Query: 302 RERNVKKEPGVSW 314
+ R+V VSW
Sbjct: 371 KSRDV-----VSW 378
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 47/89 (52%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
+L+ ++L MY K G L + V M R+V++W +I+ +G D + ++ ++
Sbjct: 343 NLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQ 402
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQ 93
G PD I FV+ +++CS L +G+
Sbjct: 403 DSGLVPDSIAFVTTLAACSHAGLLEEGRS 431
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 89/206 (43%), Gaps = 13/206 (6%)
Query: 70 PDKITFV--SVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV 127
P + F+ V+ + ++ TL + +H+ ++ + + L+ Y+ + +
Sbjct: 38 PQETVFLLGQVLDTYPDIRTL---RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASAR 94
Query: 128 KTFLECEYSDVVLWSSMIAAY---GFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
K F E +V++ + MI +Y GF+G+G + +F M + TF +L ACS
Sbjct: 95 KVFDEIPERNVIIINVMIRSYVNNGFYGEG---VKVFGTMCGCNVRPDHYTFPCVLKACS 151
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
G G + K L +V + G+CG+L EA ++ M + + + W
Sbjct: 152 CSGTIVIGRKIHG-SATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMS-RRDVVSW 209
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGV 270
+L+ ++ D A + E+ V
Sbjct: 210 NSLVVGYAQNQRFDDALEVCREMESV 235
>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 330 bits (847), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 176/450 (39%), Positives = 257/450 (57%), Gaps = 25/450 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G ++ +L +MY + +V + V+ + +I G A+ + L +
Sbjct: 151 GLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAMITGYARGSRPNEALSLF 210
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
++ +P +T +SV+SSC+ L L G+ +H V K G + V V ++LI MY++C
Sbjct: 211 RELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNGFNRFVKVDTALIDMYAKC 270
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G LDD+V F D WS+MI AY HG G +A++LF++M + E +++TF+ LL
Sbjct: 271 GSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAGTEPDEITFLGLL 330
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
YACSH GL E+G E+F M KY P ++HY C+VDLLGR G L+EA I +P++
Sbjct: 331 YACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLGRAGRLEEAYEFIVGLPIRPT 390
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
I+W+TLLSAC +H + ++ R+ E+I ++ Y++LSN+ A A RW+ V+ R+
Sbjct: 391 PILWRTLLSACGSHGNVELGKRVIEQIFELDDSHGGDYIILSNLCARAGRWEDVNYVRKL 450
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M ER V K PG S +E+ N VH+F GD H S ++ L+EL E+KL GYVP+T
Sbjct: 451 MNERGVVKIPGCSSVEVNNVVHEFFSGDGVHSVSTKLHQALDELVKELKLVGYVPNTSLV 510
Query: 361 MH-DMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPFKYISEIKN-------------- 405
H DM+ EEKE L++HSEKLAI F GL+ P I +KN
Sbjct: 511 FHADMEDEEKEVTLRYHSEKLAITF-----GLLNTPPGTTIRVVKNLRVCGDCHSAAKLI 565
Query: 406 -----REIIVRDASRFHHFRNGKCSCGDYW 430
R+II+RD RFHHF++GKCSC DYW
Sbjct: 566 SLIFDRQIILRDVQRFHHFKDGKCSCEDYW 595
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 115/223 (51%), Gaps = 2/223 (0%)
Query: 32 MPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQG 91
+P +++ + T+ G A+ + + G PD TF S++ +C+ L +G
Sbjct: 81 IPQPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCKALEEG 140
Query: 92 QQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFH 151
+Q+H +K G S +V V +LI+MY+ C +D + + F + VV +++MI Y
Sbjct: 141 RQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAMITGYARG 200
Query: 152 GKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEH 211
+ EA++LF +++ + + DVT +S+L +C+ G + G ++ VKK ++
Sbjct: 201 SRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLG-KWMHEYVKKNGFNRFVKV 259
Query: 212 YTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
T ++D+ +CG LD+A + NM V+ + W ++ A H
Sbjct: 260 DTALIDMYAKCGSLDDAVCVFENMAVR-DTQAWSAMIMAYAIH 301
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 330 bits (847), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 169/440 (38%), Positives = 253/440 (57%), Gaps = 15/440 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+V+ +S +++ L E M R+ ++W T+I+ A + + + + M
Sbjct: 484 DIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMF 543
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
P+ ++ C L GQQIH +K G ++ V ++LISMY +CGC D
Sbjct: 544 CEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGCAD 603
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
S + F E D+ W+++I Y HG G EAI +++ ME N+VTFV LL ACS
Sbjct: 604 -SRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACS 662
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL ++G +FF M + Y P EHY C+VDLLGR G + A I +MP++ + +IW
Sbjct: 663 HAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIW 722
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
LL ACK HK+ ++ R AE++ + P +A YV+LSNI++S W V+E R+ M+++
Sbjct: 723 SALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQ 782
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
V KEPG SW +IK+++H F GDK H + EI LEEL + +K GYVPDT +HD+
Sbjct: 783 GVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLEELYTLLKATGYVPDTEFVLHDI 842
Query: 365 DSEEKEYNLKHHSEKLAIAFA--EHTRGLIVMLP------------FKYISEIKNREIIV 410
D E+KE +L +HSEKLA+A+ +G+ + + K++S + R+I +
Sbjct: 843 DEEQKESSLLYHSEKLAVAYCLLATPKGMPIQILKNLRICGDCHTFIKFVSHVTKRQIDI 902
Query: 411 RDASRFHHFRNGKCSCGDYW 430
RD +RFHHFRNG CSC D+W
Sbjct: 903 RDGNRFHHFRNGSCSCEDFW 922
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 113/220 (51%), Gaps = 8/220 (3%)
Query: 6 LVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRM 65
+V+ ++L YM++G + E +++ MP RN I+W +IAG AQNG +E+ L +
Sbjct: 353 VVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHR 412
Query: 66 VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD 125
G P + S+ +CS + L G Q+H+ VK G + ++LI+MY +C ++
Sbjct: 413 SGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEY 472
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
+ + F D+V W+S +AA + +EA N F+ M ++ DV++ +++ A +H
Sbjct: 473 ARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRD----DVSWTTIISAYAH 528
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYL 225
+ M F M ++ L + + LLG CG L
Sbjct: 529 AEQSNEAMGAFKTMFCEH----ELPNSPILTILLGVCGSL 564
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 120/264 (45%), Gaps = 11/264 (4%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ + +S+ Y S +V+ + MP RN+++W +I+G + D + M
Sbjct: 157 DVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMH 216
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR-CGCL 123
G PD+ F S +S+ L L + + +K G DV + ++++++YSR L
Sbjct: 217 REGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVL 276
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
D ++K F + WS+MIAA G+ + AI ++E+ K +L+
Sbjct: 277 DTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACR----TALITGL 332
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
+ CG + F+ + +P + + ++ + G ++EA L MP + N I
Sbjct: 333 AQCGRIDDARILFEQI-----PEPIVVSWNALITGYMQNGMVNEAKELFDKMPFR-NTIS 386
Query: 244 WKTLLSACKTHKSTDMAGRIAEEI 267
W +++ + ++ A + +E+
Sbjct: 387 WAGMIAGYAQNGRSEEALGLLQEL 410
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 145/316 (45%), Gaps = 23/316 (7%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGE-KVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQ 59
GFE D+V G+++ ++Y + S+++ K M RN W T+IA + G + +
Sbjct: 254 GFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAV 313
Query: 60 Y--NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMY 117
Y + ++ + R IT ++ + L +QI +V + ++LI+ Y
Sbjct: 314 YERDPVKSIACRTALITGLAQCGRIDDARIL--FEQIPEPIVVS--------WNALITGY 363
Query: 118 SRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
+ G ++++ + F + + + + W+ MIA Y +G+ EEA+ L +++ + + +
Sbjct: 364 MQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLT 423
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC--VVDLLGRCGYLDEAAALIRNM 235
S+ +ACS+ E G + L VK + + C ++ + G+C ++ A + M
Sbjct: 424 SIFFACSNIVALETGTQVHSLAVKV---GCQFNSFACNALITMYGKCRNMEYARQVFSRM 480
Query: 236 PVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRW-QGV 294
K + + W + L+A + D A + +L +D + + + +A A++ + +
Sbjct: 481 VTK-DIVSWNSFLAALVQNDLLDEARNTFDNML---SRDDVSWTTIISAYAHAEQSNEAM 536
Query: 295 SEFREAMRERNVKKEP 310
F+ E + P
Sbjct: 537 GAFKTMFCEHELPNSP 552
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 98/226 (43%), Gaps = 17/226 (7%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
EL++ S+ + G + E +V MP R++IAW ++I+ NG+ + D Y+
Sbjct: 31 ELEVSGCSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDA 90
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
+ R I ++S L + + +++ +++ + +++IS Y + G
Sbjct: 91 ISGGNMRTGAI----LLSGYGRLGRVLEARRVFDGMLER----NTVAWNAMISCYVQNGD 142
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
+ + + F DV W+SM+ Y + +A NLFE+M ++ VS
Sbjct: 143 ITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPER-------NLVSWTVM 195
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRK--PRLEHYTCVVDLLGRCGYLD 226
S G E + +D+ K +R P ++ + + G LD
Sbjct: 196 ISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLD 241
>gi|357436955|ref|XP_003588753.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477801|gb|AES59004.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 600
Score = 330 bits (847), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 169/446 (37%), Positives = 267/446 (59%), Gaps = 16/446 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSG--SLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLD 58
GFE D+ ++L HMY G EKV P + + W +IAG + G + +D
Sbjct: 155 GFEEDVHVLNTLIHMYCCLGEDGFEFAEKVFDDSPKMDTVTWSAMIAGFVRLGCSSRAVD 214
Query: 59 QYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
+ M+++G PD+IT VSV+S+C++L L G+ + + V K V + ++LI M++
Sbjct: 215 LFREMQVMGVCPDEITMVSVLSACADLGALELGKWVESYVEKKNIPKSVELCNALIDMFA 274
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+CG +D ++K F + + +V W+S+IA HG+G +A++LF++M + +DV F+
Sbjct: 275 KCGNVDKAIKLFRQMDSRTIVSWTSVIAGLAMHGRGLDAVSLFDEMVENGITPDDVAFIG 334
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+L ACSH GL +KG +F M + + P++EHY C+VDLL R G++ EA ++ MP +
Sbjct: 335 VLSACSHSGLVDKGRYYFGSMERNFSIVPKVEHYGCMVDLLCRGGFVKEAFEFVQKMPFE 394
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
N IIW+T+++AC + I++E++ P + YVLLSNI+A ++W+ ++ R
Sbjct: 395 PNQIIWRTIITACHATGELKLGESISKELIKSEPMHESNYVLLSNIYAKLRQWEKKTKVR 454
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
E M R +KK PG + +E+ N++++F GDKSH + EI ++E+ E+K GYVP T
Sbjct: 455 EMMDMRGMKKVPGSTMIEVNNEMYEFVAGDKSHDQYKEIYEMVDEMGREIKKAGYVPTTS 514
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIK 404
+ D+D E+KE L HSEKLAIAFA G + + K+IS++
Sbjct: 515 QVLLDIDEEDKEDALYRHSEKLAIAFALLNTPPGTSIRIVKNLRVCEDCHSATKFISKVY 574
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
NREI+VRD +RFHHF+NG CSC D+W
Sbjct: 575 NREIVVRDRNRFHHFKNGLCSCRDFW 600
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 124/257 (48%), Gaps = 8/257 (3%)
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
Y M G P+K TF V+ C+ + +L G+ +H VVK G DV V+++LI MY
Sbjct: 113 YRTMLRYGVTPNKFTFPFVLKGCAGIGSLRLGKCVHGCVVKFGFEEDVHVLNTLIHMYCC 172
Query: 120 CG--CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
G + + K F + D V WS+MIA + G A++LF +M+ +++T V
Sbjct: 173 LGEDGFEFAEKVFDDSPKMDTVTWSAMIAGFVRLGCSSRAVDLFREMQVMGVCPDEITMV 232
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
S+L AC+ G E G ++ + V+K +E ++D+ +CG +D+A L R M
Sbjct: 233 SVLSACADLGALELG-KWVESYVEKKNIPKSVELCNALIDMFAKCGNVDKAIKLFRQMDS 291
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVS 295
+ + W ++++ H A + +E++ G+ P D A +LS S +G
Sbjct: 292 RT-IVSWTSVIAGLAMHGRGLDAVSLFDEMVENGITPDDVAFIGVLSACSHSGLVDKGRY 350
Query: 296 EFREAMRERNVKKEPGV 312
F ERN P V
Sbjct: 351 YF--GSMERNFSIVPKV 365
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 330 bits (847), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 174/450 (38%), Positives = 262/450 (58%), Gaps = 27/450 (6%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G L LV ++L MY K G L + + + +++I+W +I G + ++ L +
Sbjct: 296 GSNLRLV--NALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALF 353
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASL-DVGVISSLISMYSR 119
M+ P+ +TFVS++ +C+ L L G+ IHA + K L + + +SLI MY++
Sbjct: 354 RKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAK 413
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG ++ + + F + + W++MI+ HG A+ LF QM + FE +D+TFV +
Sbjct: 414 CGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGV 473
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L ACSH GL E G + F MV+ Y P+L+HY C++DLLGR G DEA AL++NM +K
Sbjct: 474 LSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKP 533
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
+ IW +LL AC+ H + ++ A+ + + P++ YVLLSNI+A+A RW V+ R
Sbjct: 534 DGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRT 593
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
+ ++ +KK PG S +E+ + VH+F +GDK H +S +I L+E+ ++ G+VPDT
Sbjct: 594 KLNDKGMKKVPGCSSIEVDSVVHEFLVGDKVHEQSQDIYKMLDEIDQLLEKAGHVPDTSE 653
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYI 400
++DMD E KE +L HHSEKLAIAF GLI P K I
Sbjct: 654 VLYDMDEEWKEGSLSHHSEKLAIAF-----GLISTKPETTIRIVKNLRVCGNCHSAIKLI 708
Query: 401 SEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
S+I NREII RD +RFHHF++G CSC DYW
Sbjct: 709 SKIFNREIIARDRNRFHHFKDGSCSCMDYW 738
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 141/272 (51%), Gaps = 3/272 (1%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D V+ ++L Y G L + ++ +P+R+ ++W +IAG AQ+G E+ L + M+
Sbjct: 197 DAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMK 256
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
P++ T V+V+S+C++ +L G + + + G ++ ++++LI MYS+CG LD
Sbjct: 257 RANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLD 316
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ F D++ W+ MI Y +EA+ LF +M+Q E NDVTFVS+L AC+
Sbjct: 317 KARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACA 376
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
+ G + G + KK+ +T ++D+ +CG ++ A + M K+ W
Sbjct: 377 YLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLG-SW 435
Query: 245 KTLLSACKTHKSTDMAGRIAEEIL--GVNPQD 274
++S H +MA + ++ G P D
Sbjct: 436 NAMISGLAMHGHANMALELFRQMRDEGFEPDD 467
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 113/244 (46%), Gaps = 33/244 (13%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
N W T+I G + + +D Y M + G P+ TF ++ SC+++ +G+QIH
Sbjct: 96 NQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIH 155
Query: 96 AEVVKAGASLDVGVISSLISMYSRC-------------------------------GCLD 124
V+K G D V +SLI+MY++ GCLD
Sbjct: 156 GHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLD 215
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D+ + F E D V W++MIA Y G+ EEA+ F++M++ N+ T V++L AC+
Sbjct: 216 DARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACA 275
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
G E G + ++ + L ++D+ +CG LD+A L + + + I W
Sbjct: 276 QSGSLELG-NWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGI-CEKDIISW 333
Query: 245 KTLL 248
++
Sbjct: 334 NVMI 337
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 103/233 (44%), Gaps = 10/233 (4%)
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISM--YSRCGCLDDSVKTFLEC 133
++++S+C L +QIH++++K G +S LI S G L ++ F
Sbjct: 36 LTLLSTCKSFQNL---KQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESI 92
Query: 134 EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGM 193
E + +W++MI AI+ + +M E N TF LL +C+ G ++G
Sbjct: 93 EQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGK 152
Query: 194 EFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKT 253
+ ++K H T ++++ + G L A + ++ +A+ + L++
Sbjct: 153 QIHGHVLKLGLESDPFVH-TSLINMYAQNGELGYAELVFSKSSLR-DAVSFTALITGYTL 210
Query: 254 HKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNV 306
D A R+ EEI +DA + + +A + R++ F + M+ NV
Sbjct: 211 RGCLDDARRLFEEI---PVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANV 260
>gi|413938666|gb|AFW73217.1| hypothetical protein ZEAMMB73_724608 [Zea mays]
Length = 610
Score = 330 bits (847), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 173/446 (38%), Positives = 263/446 (58%), Gaps = 25/446 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D + +++ YM +G++ + + MP+RN+++W ++AG +N A+D L + M
Sbjct: 170 DAILWTAMVSGYMDTGNVQKAMEFFGAMPVRNLVSWNAVVAGYVKNSRADDALRVFKTMV 229
Query: 65 MVGF-RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
+P+ T SV+ CS L+ LG G+Q+H +K S +V V +SL+SMY +CG L
Sbjct: 230 EDSIVQPNASTLSSVLLGCSNLSALGFGRQVHQWCMKLPLSRNVTVGTSLLSMYCKCGDL 289
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
+D+ K F E D+V W++MI+ Y HG G +AI LFE+M+ + + +T +++L AC
Sbjct: 290 NDACKVFDEMSTKDIVAWNAMISGYAQHGGGMQAIKLFEKMKDEGVVPDWITLLAVLTAC 349
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
H GL + G++ F+ M + Y+ +P+++HY+C+VDLL R G L+ A +I +MP + +
Sbjct: 350 IHTGLCDFGIQCFETMQEAYKIEPQIDHYSCMVDLLCRAGLLERAVNMIHSMPFEPHPSA 409
Query: 244 WKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
+ TLL+AC+ +K+ + A A +++ +PQ+A YV L+NI+A A +W VS R M++
Sbjct: 410 YGTLLTACRVYKNLEFAEFAARKLIEQDPQNAGAYVQLANIYAVANKWADVSRVRRWMKD 469
Query: 304 RNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHD 363
V K PG SW+EIK H+F D+ HP+ I L+ L MK GYVPD +HD
Sbjct: 470 NAVVKTPGYSWMEIKGVRHEFRSNDRLHPQLGLIHDKLDRLQMLMKAMGYVPDLDFALHD 529
Query: 364 MDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIK 404
++ K L HSEKLAIAF GLI P K IS+I+
Sbjct: 530 VEDSLKSQMLMRHSEKLAIAF-----GLISTSPGMTLRIFKNLRICGDCHNAAKLISKIE 584
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
+REII+RD +RFHHFR G CSCGDYW
Sbjct: 585 DREIILRDTTRFHHFRGGHCSCGDYW 610
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/267 (19%), Positives = 126/267 (47%), Gaps = 16/267 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D V+ ++L + G + +V MP+++V +W T+++G ++NG +E+ + +M
Sbjct: 76 DTVSYNTLLSCHFACGDIDGARRVFSTMPVKDVTSWNTMVSGLSKNGASEEAAAMFRIMP 135
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+ + +++ +++++ + +G + + A D + ++++S Y G +
Sbjct: 136 V----RNAVSWNAMVAALACSGDMGAAEDLFRN---APEKTDAILWTAMVSGYMDTGNVQ 188
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM-EQKEFEANDVTFVSLLYAC 183
+++ F ++V W++++A Y + + ++A+ +F+ M E + N T S+L C
Sbjct: 189 KAMEFFGAMPVRNLVSWNAVVAGYVKNSRADDALRVFKTMVEDSIVQPNASTLSSVLLGC 248
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLG---RCGYLDEAAALIRNMPVKAN 240
S+ G + +K P + T LL +CG L++A + M K +
Sbjct: 249 SNLSALGFGRQVHQWCMK----LPLSRNVTVGTSLLSMYCKCGDLNDACKVFDEMSTK-D 303
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEI 267
+ W ++S H A ++ E++
Sbjct: 304 IVAWNAMISGYAQHGGGMQAIKLFEKM 330
>gi|297736155|emb|CBI24193.3| unnamed protein product [Vitis vinifera]
Length = 1083
Score = 330 bits (847), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 168/451 (37%), Positives = 266/451 (58%), Gaps = 30/451 (6%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIR---LMPIRNVIAWITLIAGKAQNGLAEDVLDQ 59
E DL++ +S+ Y++ G ++G K++ M + + W LI G A+N + +
Sbjct: 640 ERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKPDRVTWNALIGGHAENEEPNEAVKA 699
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
Y L+R G + IT VS +++ + LA L +GQQ+H V+K G D+ V ++ + MY +
Sbjct: 700 YKLIREKGIPANYITMVS-LAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGK 758
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG + D +K + + W+ +I+A+ HG ++A F +M + + + VTFVSL
Sbjct: 759 CGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSL 818
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L AC+H GL ++G+ ++D M +++ P +EH C++DLLGR G L A I+ MPV
Sbjct: 819 LSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPP 878
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
N + W++LL+AC+ H + ++A + AE +L ++P D + YVL SN+ A++ +W+ V R+
Sbjct: 879 NDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRK 938
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M N+KK+P SW+++K++VH F MG+K HP++ I L EL K GYVPDT
Sbjct: 939 EMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKEAGYVPDTSF 998
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP--------------------FKY 399
+HDMD E+KEYNL +HSE+LA+AF ++ P +K+
Sbjct: 999 ALHDMDEEQKEYNLWNHSERLALAFG------LINTPESSTLRIFKNLRVCGDCHSVYKF 1052
Query: 400 ISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+S I R+I++RD RFHHF GKCSCGDYW
Sbjct: 1053 VSGIVGRKIVLRDPYRFHHFSGGKCSCGDYW 1083
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 144/316 (45%), Gaps = 24/316 (7%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ G++L H Y G + +K+ MP NV++W +L+ G + +G +VL+ Y MR
Sbjct: 409 DVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMR 468
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G ++ TF +V SSC L G Q+ +++ G V V +SLISM+S ++
Sbjct: 469 QEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVE 528
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
++ F D++ W++MI+AY HG E++ F M E N T SLL CS
Sbjct: 529 EACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCS 588
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLL-------GRCGYLDEAAALIRNMPV 237
+ G L+VK L+ C+ + L GR E A L+
Sbjct: 589 SVDNLKWGRGIHGLVVKL-----GLDSNVCICNTLLTLYSEAGR----SEDAELVFQAMT 639
Query: 238 KANAIIWKTLLSACKTHKSTDMAG-RIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSE 296
+ + I W +++ AC + G +I E+L + D + L HA + E
Sbjct: 640 ERDLISWNSMM-ACYVQDGKCLDGLKILAELLQMGKPDRVTWNALIGGHAENE------E 692
Query: 297 FREAMRERNVKKEPGV 312
EA++ + +E G+
Sbjct: 693 PNEAVKAYKLIREKGI 708
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 125/257 (48%), Gaps = 9/257 (3%)
Query: 3 ELDLVAGSSLAHMYMKSG--SLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
E ++++ +SL Y K G + V M RN +W T+++G + GL E+ + +
Sbjct: 303 EKNVISWTSLISGYAKHGYGHMAHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLF 362
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLG-QGQQIHAEVVKAGASLDVGVISSLISMYSR 119
M +G P+ S+I++CS + +G Q+H VVK G DV V ++L+ Y
Sbjct: 363 CQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGS 422
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G + ++ K F E +VV W+S++ Y G E +N++++M Q+ N TF ++
Sbjct: 423 IGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATV 482
Query: 180 LYACSHCGLKEKGMEFFDLM--VKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
S CGL E + + ++ + +Y + + ++ + ++EA + +M
Sbjct: 483 ---TSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMN- 538
Query: 238 KANAIIWKTLLSACKTH 254
+ + I W ++SA H
Sbjct: 539 ECDIISWNAMISAYAHH 555
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 156/348 (44%), Gaps = 41/348 (11%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE + +SL M+ S+ E V M ++I+W +I+ A +GL + L +
Sbjct: 506 GFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCF 565
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ MR + + T S++S CS + L G+ IH VVK G +V + ++L+++YS
Sbjct: 566 HWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEA 625
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAY-------------------------------G 149
G +D+ F D++ W+SM+A Y G
Sbjct: 626 GRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKPDRVTWNALIG 685
Query: 150 FHGKGE---EAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRK 206
H + E EA+ ++ + +K AN +T VSL A ++ + E+G + L++ K +
Sbjct: 686 GHAENEEPNEAVKAYKLIREKGIPANYITMVSLA-ATANLAVLEEGQQLHGLVI-KLGFE 743
Query: 207 PRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEE 266
L +D+ G+CG + + ++ P+ + + W L+SA H A E
Sbjct: 744 SDLHVTNAAMDMYGKCGEMHDVLKMLPQ-PINRSRLSWNILISAFARHGCFQKARETFHE 802
Query: 267 ILGVNPQ-DAAPYV-LLSNIHASAKRWQGVSEFREAMRERNVKKEPGV 312
+L + P+ D +V LLS + +G++ + RE V PG+
Sbjct: 803 MLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVF--PGI 848
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 121/322 (37%), Gaps = 83/322 (25%)
Query: 8 AGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVG 67
A +L + K G + + + M R+V++W +I G A G A+D + M G
Sbjct: 129 ANHALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGG 188
Query: 68 FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAG-ASLDV--GVI-------------- 110
PD T SV+ + +E L QIH + + G S D+ G++
Sbjct: 189 LVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAK 248
Query: 111 ------------------------------SSLISMYSRCGCLDDSVKTFLECEYSDVVL 140
++LI MY++ G ++D+ + F E E +V+
Sbjct: 249 DLRKGMLKKDLFSSTALITGYAHEGIYTMGNALIDMYAKSGEIEDAKRAFDEMEEKNVIS 308
Query: 141 WSSMIAAYGFHGKG---------------------------------EEAINLFEQMEQK 167
W+S+I+ Y HG G EEA+ LF QM
Sbjct: 309 WTSLISGYAKHGYGHMAHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGL 368
Query: 168 EFEANDVTFVSLLYACSHCG-LKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLD 226
E N SL+ ACS G + ++G + +VK + T +V G G +
Sbjct: 369 GVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKT-GILGDVYVGTALVHFYGSIGLVY 427
Query: 227 EAAALIRNMPVKANAIIWKTLL 248
A L MP N + W +L+
Sbjct: 428 NAQKLFEEMP-DHNVVSWTSLM 448
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 76/187 (40%), Gaps = 39/187 (20%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF DL + L Y+K G ++ V MP R+V++W +++G +QNG E +
Sbjct: 60 GFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLF 119
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ MR G + + HA L+ +S+C
Sbjct: 120 SDMRHCGVKAN-----------------------HA----------------LVDFHSKC 140
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++D+ F DVV W++MI Y G +++ +F M + + T S+L
Sbjct: 141 GKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVL 200
Query: 181 YACSHCG 187
A + G
Sbjct: 201 RASAEGG 207
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 91/192 (47%), Gaps = 9/192 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPI---RNVIAWITLIAGKAQNGLAEDVL 57
GFE DL ++ MY K G E V++++P R+ ++W LI+ A++G +
Sbjct: 741 GFESDLHVTNAAMDMYGKCG---EMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKAR 797
Query: 58 DQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISM 116
+ ++ M +G +PD +TFVS++S+C+ + +G + + + G + +I +
Sbjct: 798 ETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDL 857
Query: 117 YSRCGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVT 175
R G L + E + + W S++AA HG E A E + + + ++D
Sbjct: 858 LGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELD-PSDDSA 916
Query: 176 FVSLLYACSHCG 187
+V C+ G
Sbjct: 917 YVLYSNVCATSG 928
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 112/264 (42%), Gaps = 15/264 (5%)
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
R D ++ ++ C + QG IH ++ G D+ + + LI Y + G + +
Sbjct: 27 RLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARN 86
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F VV W++M++ Y +G+ E+A LF M +AN +L+ S CG
Sbjct: 87 VFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANH----ALVDFHSKCGK 142
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
E F M+++ + + ++ G+ D++ + R+M TL
Sbjct: 143 MEDASYLFGTMMER-----DVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLG 197
Query: 249 SACKTHKSTDMAGR-IAEEILGVNPQ-DAAPYVLLSNIHASAKRWQGVSEFREAMRERNV 306
S + S + G IA +I G+ Q Y +++ + +A G + +R+ +
Sbjct: 198 SVLRA--SAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGML 255
Query: 307 KKEPGVSWLEIKNQVHQ--FTMGD 328
KK+ S I H+ +TMG+
Sbjct: 256 KKDLFSSTALITGYAHEGIYTMGN 279
>gi|224089225|ref|XP_002308660.1| predicted protein [Populus trichocarpa]
gi|222854636|gb|EEE92183.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 330 bits (846), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 167/448 (37%), Positives = 262/448 (58%), Gaps = 18/448 (4%)
Query: 1 GFELDLVAGSSLAHMYM----KSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDV 56
GF ++ ++L HMY G + KV M + ++W +I G + G + D
Sbjct: 40 GFGDEVNVQNTLVHMYCCCRGGEGGIEFARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDA 99
Query: 57 LDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISM 116
++ + M++ G PD+IT VSV+S+C+ L L G+ + + V K +V + ++LI M
Sbjct: 100 INLFREMQIKGVCPDEITMVSVLSACTGLGALELGKWVESYVEKERVQKNVELSNALIDM 159
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
+++CG +D + F ++V W+S+I HG+G EA+ +FE+M + +DV F
Sbjct: 160 FAKCGDVDKATNLFRSMRERNIVSWTSVIGGLAMHGRGVEAVAVFEEMVRSGVTPDDVVF 219
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
+ LL ACSH GL +KG +FD M K + P++EHY C+VD+L R G + EA ++ MP
Sbjct: 220 IGLLSACSHSGLVDKGKRYFDSMRKDFSIVPKIEHYGCMVDMLCRAGLVKEALKFVQEMP 279
Query: 237 VKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSE 296
+ N ++W+TL++AC+ H + +I +++ P + YVLLSNI+A W+ +
Sbjct: 280 IDPNPVVWRTLINACRAHGELKLGEKITRQLIRNEPMHESNYVLLSNIYAKMSDWEKKTR 339
Query: 297 FREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPD 356
REAM + +KK PG + +E+ N++++F GDKSH +S EI ++E+ EMK GY+P
Sbjct: 340 IREAMDMKGMKKIPGSTMIELDNEIYEFVAGDKSHAQSKEIYEMVDEMGKEMKRAGYMPT 399
Query: 357 TGADMHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISE 402
T + D+D E+KE L HSEKLAIAFA G ++ + K+IS+
Sbjct: 400 TTEVLLDIDDEDKEDTLNRHSEKLAIAFALLNTPPGTLIRIVKNLRVCDDCHSASKFISK 459
Query: 403 IKNREIIVRDASRFHHFRNGKCSCGDYW 430
I NREI+VRD +RFHHF+NG CSC D+W
Sbjct: 460 IYNREIVVRDRNRFHHFKNGLCSCRDFW 487
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 127/240 (52%), Gaps = 9/240 (3%)
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC----GCLDD 125
P+K T+ V+ +C+ + L G+ +H V+K G +V V ++L+ MY C G ++
Sbjct: 8 PNKFTYPFVLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCRGGEGGIEF 67
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
+ K F E SD V WS+MI Y G+ +AINLF +M+ K +++T VS+L AC+
Sbjct: 68 ARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSVLSACTG 127
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
G E G ++ + V+K R + +E ++D+ +CG +D+A L R+M + N + W
Sbjct: 128 LGALELG-KWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRER-NIVSWT 185
Query: 246 TLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
+++ H A + EE++ GV P D LLS S +G F ++MR+
Sbjct: 186 SVIGGLAMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLLSACSHSGLVDKGKRYF-DSMRK 244
>gi|115469684|ref|NP_001058441.1| Os06g0694300 [Oryza sativa Japonica Group]
gi|53791823|dbj|BAD53889.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|53792844|dbj|BAD53877.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113596481|dbj|BAF20355.1| Os06g0694300 [Oryza sativa Japonica Group]
gi|125598347|gb|EAZ38127.1| hypothetical protein OsJ_22476 [Oryza sativa Japonica Group]
Length = 648
Score = 330 bits (846), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 172/444 (38%), Positives = 265/444 (59%), Gaps = 16/444 (3%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E D+++ +S+ Y +SG + E+V P+++++AW ++ G AQN + L+ ++
Sbjct: 205 EKDVISWTSIVVAYTRSGDMRSAEEVFGRCPVKDMVAWTAMVTGYAQNAMPVKALEVFDR 264
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M +G D+++ IS+C++L L + + + G +V V S L+ MY++CG
Sbjct: 265 MAELGMVIDEVSLTGAISACAQLGALRRAAWVQEIAERTGFGNNVVVGSGLVDMYAKCGL 324
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM-EQKEFEANDVTFVSLLY 181
+D++ K F + +V +SSMIA HG+ EAI LF++M + E N VTF+ +L
Sbjct: 325 IDEASKVFYGMQEKNVYTYSSMIAGLASHGRASEAIALFKEMVNRANVEPNHVTFIGVLT 384
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
ACSH G+ +G +F M KY P +HY C+VDLLGR G +DEA L+R+M V +
Sbjct: 385 ACSHAGMVGEGRYYFAQMKDKYGIMPSADHYACMVDLLGRAGLVDEALDLVRSMSVTPHG 444
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
+W LL AC+ H +++A +AE + + P+ YVLLSNI ASA +W+ VS+ R M
Sbjct: 445 GVWGALLGACRIHGKSEIAKVVAEHLFKLEPESIGNYVLLSNILASAGKWEEVSKVRILM 504
Query: 302 RERNVKKEPGVSWLEIKNQ-VHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
R++ +KK+P VS E ++ VHQF GD +HPR+ EI L EL +++KL GYVP +
Sbjct: 505 RKQRLKKDPAVSLFEGRDGLVHQFFAGDNAHPRTHEIKKALLELVAKLKLEGYVPILSSI 564
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRG------LI--------VMLPFKYISEIKNR 406
++D++ EEKE L HSEKLA++F T G +I L + +S +++
Sbjct: 565 VYDVNDEEKERLLMGHSEKLALSFGLLTLGSGCTIRIIKNLRICDDCHLFMQLVSRVESV 624
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EIIVRD RFHHF+NG+CSCG +W
Sbjct: 625 EIIVRDNMRFHHFKNGECSCGGFW 648
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 88/176 (50%), Gaps = 7/176 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF ++V GS L MY K G + E KV M +NV + ++IAG A +G A + + +
Sbjct: 304 GFGNNVVVGSGLVDMYAKCGLIDEASKVFYGMQEKNVYTYSSMIAGLASHGRASEAIALF 363
Query: 61 N-LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVV-KAGASLDVGVISSLISMYS 118
++ P+ +TF+ V+++CS +G+G+ A++ K G + ++ +
Sbjct: 364 KEMVNRANVEPNHVTFIGVLTACSHAGMVGEGRYYFAQMKDKYGIMPSADHYACMVDLLG 423
Query: 119 RCGCLD---DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEA 171
R G +D D V++ + V W +++ A HGK E A + E + + E E+
Sbjct: 424 RAGLVDEALDLVRSMSVTPHGGV--WGALLGACRIHGKSEIAKVVAEHLFKLEPES 477
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 77/193 (39%), Gaps = 45/193 (23%)
Query: 109 VISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE 168
V +SLI Y CG + + K F E DV+ W+S++ AY G A +F + K+
Sbjct: 179 VENSLIGAYVACGDVGAARKVFDEMVEKDVISWTSIVVAYTRSGDMRSAEEVFGRCPVKD 238
Query: 169 FEANDVTFVSLLYACSHCGLKEKGMEFFDLMVK---------------------KYRRKP 207
V + +++ + + K +E FD M + RR
Sbjct: 239 M----VAWTAMVTGYAQNAMPVKALEVFDRMAELGMVIDEVSLTGAISACAQLGALRRAA 294
Query: 208 RLEHY-------------TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
++ + +VD+ +CG +DEA+ + M K N + ++++ +H
Sbjct: 295 WVQEIAERTGFGNNVVVGSGLVDMYAKCGLIDEASKVFYGMQEK-NVYTYSSMIAGLASH 353
Query: 255 KSTDMAGRIAEEI 267
GR +E I
Sbjct: 354 ------GRASEAI 360
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 330 bits (846), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 159/445 (35%), Positives = 261/445 (58%), Gaps = 24/445 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+++ +++ + G + MP ++ ++W +I G ++ ++ L+ + M+
Sbjct: 305 DIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQ 364
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+PD+ T VSV+++C+ L L G+ I + + D+ V ++LI MY +CG +D
Sbjct: 365 ATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVD 424
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ F E D W++MI +G GE+A+++F M + +++T++ +L AC+
Sbjct: 425 KAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACT 484
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL +KG ++F M ++ +P + HY C+VDLL R G L EA +I NMP+KAN+I+W
Sbjct: 485 HTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVW 544
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
LL+ C+ ++ +DMA + ++IL + P + A YVLL NI+A+ KRW + E R+ M ++
Sbjct: 545 GALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDK 604
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
+KK PG S +E+ +VH+F GD+SHP++ ID L+++T ++KL GY PD D+
Sbjct: 605 GIKKXPGCSLIEMNGRVHEFVAGDRSHPQTKNIDAKLDKMTQDLKLAGYSPDISEVFLDI 664
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKN 405
E+KE ++ HSEKLAIAF GLI P K +S++ N
Sbjct: 665 AEEDKENSVFRHSEKLAIAF-----GLINSPPGVTIRITKNLRMCMDCHNMAKLVSKVYN 719
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
RE+IVRD +RFHHF++G CSC DYW
Sbjct: 720 REVIVRDRTRFHHFKHGLCSCKDYW 744
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 134/290 (46%), Gaps = 5/290 (1%)
Query: 20 GSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVI 79
G ++ +P N+ W T+I G ++ + + Y M G +PD+ TF +
Sbjct: 87 GDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLF 146
Query: 80 SSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVV 139
+ L G+Q+H V+K G +V V ++L+ MY CG LD + F C +DV+
Sbjct: 147 KGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVI 206
Query: 140 LWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLM 199
W+ +I+AY GK EE+ LF ME K+ VT V +L ACS G +
Sbjct: 207 TWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSY- 265
Query: 200 VKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDM 259
VK + + L ++D+ CG +D A + R+M + + I W T++S D+
Sbjct: 266 VKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNR-DIISWTTIVSGFTNLGEIDV 324
Query: 260 AGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKE 309
A +++ +D + + + + + R++ E M+ NVK +
Sbjct: 325 ARNYFDKM---PEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPD 371
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 128/281 (45%), Gaps = 37/281 (13%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + ++ ++L MY+ G L V + P +VI W +I+ + G E+ +
Sbjct: 169 GLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLF 228
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+M P +T V V+S+CS+L L G+++H+ V ++ + +++I MY+ C
Sbjct: 229 LVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADC 288
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGE------------------------- 155
G +D ++ F D++ W+++++ GF GE
Sbjct: 289 GEMDSALGIFRSMNNRDIISWTTIVS--GFTNLGEIDVARNYFDKMPEKDYVSWTAMIDG 346
Query: 156 --------EAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKP 207
EA+ LF M+ + ++ T VS+L AC+H G E G E+ + + + K
Sbjct: 347 YIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELG-EWIRTYIDRNKIKN 405
Query: 208 RLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
L ++D+ +CG +D+A ++ R M + + W ++
Sbjct: 406 DLFVRNALIDMYFKCGDVDKAESIFREMS-QRDKFTWTAMI 445
>gi|414867547|tpg|DAA46104.1| TPA: hypothetical protein ZEAMMB73_772392 [Zea mays]
Length = 677
Score = 330 bits (846), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 176/445 (39%), Positives = 267/445 (60%), Gaps = 22/445 (4%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
+D+V +SL MY K+G L +V R+MP RN + W LI+G AQNG A + LD +
Sbjct: 239 MRMDVVTTTSLVSMYAKNGHLDVACQVFRMMPYRNDVTWSALISGFAQNGRAVEALDLFR 298
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVI--SSLISMYSR 119
++ G +P VS + +C+ + L G+ IH +++ L+ I ++++ MYS+
Sbjct: 299 ELQADGLQPCSWALVSALLACASVGFLKLGKSIHGFILR---RLEWQCILGTAVLDMYSK 355
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG L+ + K F + D+VLW+++IA G HG G +A+ LF+++ + + + TF SL
Sbjct: 356 CGSLESARKLFNKLSSRDLVLWNAIIACCGTHGCGHDALALFQELNETGIKPDHATFASL 415
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L A SH GL E+G +FD M+K++ +P +HY C+VDLL R G ++EA ++ +M +
Sbjct: 416 LSALSHSGLVEEGKFWFDRMIKEFGIEPAEKHYVCIVDLLARSGLVEEANDMLASMQTEP 475
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
IW LLS C +K ++ IA++IL + P+D L+SN++A+AK+W V E R+
Sbjct: 476 TIAIWVILLSGCLNNKKLELGETIAKKILELRPEDIGVLALVSNLYAAAKKWDKVREIRK 535
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M++ KK PG S +E+K H F M D+SHP+ EI + +L SEM+ GYVP T
Sbjct: 536 LMKDSGSKKVPGYSLIEVKGTRHAFVMEDQSHPQHREILKMVAKLNSEMRKLGYVPRTEF 595
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAF-----AEHTRGLIVML---------PFKYISEIKN 405
HD+D ++ L +HSE+LAIAF + TR +I+ KYIS+I +
Sbjct: 596 VYHDLDEDQL---LSYHSERLAIAFGLLNTSPGTRLVIIKNLRVCGDCHDAIKYISKIVD 652
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
REI+VRDA RFHHF++G CSCGDYW
Sbjct: 653 REIVVRDAKRFHHFKDGACSCGDYW 677
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 154/313 (49%), Gaps = 7/313 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ D+ S+L H+Y + G++ E +V MP ++ +AW T++AG G + L Y
Sbjct: 137 GYGHDVFVCSALLHLYSRCGAMEEAIRVFDGMPRKDRVAWSTMVAGFVTAGRPVEALAMY 196
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ MR G D++ V VI +C G +H +++ +DV +SL+SMY++
Sbjct: 197 SRMREHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHCMRMDVVTTTSLVSMYAKN 256
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G LD + + F Y + V WS++I+ + +G+ EA++LF +++ + VS L
Sbjct: 257 GHLDVACQVFRMMPYRNDVTWSALISGFAQNGRAVEALDLFRELQADGLQPCSWALVSAL 316
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+ G + G ++++ + L T V+D+ +CG L+ A L + + +
Sbjct: 317 LACASVGFLKLGKSIHGFILRRLEWQCILG--TAVLDMYSKCGSLESARKLFNKLSSR-D 373
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
++W +++ C TH A + +E+ G+ P A LLS + S +G F
Sbjct: 374 LVLWNAIIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFD 433
Query: 299 EAMRERNVKKEPG 311
++E + EP
Sbjct: 434 RMIKEFGI--EPA 444
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 101/210 (48%), Gaps = 3/210 (1%)
Query: 40 WITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVV 99
W L++ ++ G L + + RP+ TF +++C+ L L + +
Sbjct: 76 WNGLLSAHSRAGAPGAALRVFRALPSSA-RPNSTTFTLTLTACARLGDLDAAESVRVRAF 134
Query: 100 KAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAIN 159
AG DV V S+L+ +YSRCG ++++++ F D V WS+M+A + G+ EA+
Sbjct: 135 AAGYGHDVFVCSALLHLYSRCGAMEEAIRVFDGMPRKDRVAWSTMVAGFVTAGRPVEALA 194
Query: 160 LFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLL 219
++ +M + ++V V ++ AC G G +++ R + T +V +
Sbjct: 195 MYSRMREHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHCMRMDVVT-TTSLVSMY 253
Query: 220 GRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
+ G+LD A + R MP + N + W L+S
Sbjct: 254 AKNGHLDVACQVFRMMPYR-NDVTWSALIS 282
Score = 38.1 bits (87), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 22/210 (10%)
Query: 63 MRMVGFRPDKITFVSVISSC-SELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M F D+ V+SS + LATL ++HA +V + + ++SSL + Y+R G
Sbjct: 1 MHFPAFLADQRRLRRVLSSSRTTLATL---TRLHALLVVSSSQ---HILSSLAAAYARAG 54
Query: 122 CLDDSVKTF--LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
LD + T S + W+ +++A+ G A+ +F + N TF
Sbjct: 55 ALDAAESTLAASPSSPSSIAAWNGLLSAHSRAGAPGAALRVFRALPSSA-RPNSTTFTLT 113
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC--VVDLLGRCGYLDEAAALIRNMPV 237
L AC+ G + + V+ + + + C ++ L RCG ++EA + MP
Sbjct: 114 LTACARLGDLDAAES---VRVRAFAAGYGHDVFVCSALLHLYSRCGAMEEAIRVFDGMPR 170
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRIAEEI 267
K + + W T+++ T AGR E +
Sbjct: 171 K-DRVAWSTMVAGFVT------AGRPVEAL 193
>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 643
Score = 330 bits (846), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 171/449 (38%), Positives = 258/449 (57%), Gaps = 24/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ D+ GSSL MY + KV + + W +++AG AQNG E+ L +
Sbjct: 200 GFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVEEALGIF 259
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G RP +TF S+I + L+ L G+Q+HA +++A + ++ + SSLI MY +C
Sbjct: 260 RRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLIDMYCKC 319
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +D + + F + D+V W++MI Y HG EA LFE+ME + N +TF+++L
Sbjct: 320 GNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNHITFLAVL 379
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL + G ++F+ M +Y P LEH + D LGR G LDEA I M +K
Sbjct: 380 TACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFISEMKIKPT 439
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+ +W TLL AC+ HK+T +A +A++I + P+ +V+LSN+++++ RW ++ R++
Sbjct: 440 SSVWSTLLRACRVHKNTVLAEEVAKKIFELEPKSMGSHVILSNMYSASGRWNEAAQLRKS 499
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
MR + +KKEP SW+E+KN++H F DKSHP I L + +M +GYVP+
Sbjct: 500 MRIKGMKKEPACSWIEVKNKLHVFIAHDKSHPWYDRIIDALNVYSEQMIRQGYVPNMEDV 559
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
+ D++ E+K L HSEKLAI F G+I P K+IS
Sbjct: 560 LQDIEEEQKREVLCGHSEKLAIVF-----GIISTPPGTTIRVMKNLRVCVDCHIATKFIS 614
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+I REI+VRD +RFH F++G CSCGD+W
Sbjct: 615 KIVAREIVVRDVNRFHRFKDGNCSCGDFW 643
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 123/259 (47%), Gaps = 4/259 (1%)
Query: 17 MKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFV 76
++S + KV M R+ ++W TLI G A++ ++ L M GF PD T
Sbjct: 115 LESAAYESMRKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLS 174
Query: 77 SVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYS 136
+V+ +E A + +G +H +K G DV V SSLI MY+ C +D S+K F
Sbjct: 175 TVLPIFAECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDC 234
Query: 137 DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFF 196
D VLW+SM+A Y +G EEA+ +F +M Q VTF SL+ A + L G +
Sbjct: 235 DAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLH 294
Query: 197 DLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKS 256
+++ R + + ++D+ +CG +D A + + + + W ++ H
Sbjct: 295 AYLIRA-RFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQ-SPDIVSWTAMIMGYALHGP 352
Query: 257 TDMAGRIAE--EILGVNPQ 273
T A + E E+ V P
Sbjct: 353 TTEAFVLFERMELGNVKPN 371
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 44/225 (19%), Positives = 95/225 (42%), Gaps = 32/225 (14%)
Query: 74 TFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC------------- 120
+ + + SC+ L +HA +++G+ D ++L+++ +
Sbjct: 51 SLPAALKSCAGLGLCTLAASLHALAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPS 110
Query: 121 --GCLDDSV-----KTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEAND 173
G L+ + K F E D V W+++I H + +EA+++ +M + F +
Sbjct: 111 GEGGLESAAYESMRKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDT 170
Query: 174 VTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV----VDLLGRCGYLDEAA 229
T ++L + C ++GM +V Y K ++ V +D+ C +D +
Sbjct: 171 FTLSTVLPIFAECADIKRGM-----VVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSM 225
Query: 230 ALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNP 272
+ + +A++W ++L+ + S + A I +L GV P
Sbjct: 226 KVFDSFS-DCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRP 269
>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 330 bits (846), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 170/410 (41%), Positives = 253/410 (61%), Gaps = 15/410 (3%)
Query: 35 RNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQI 94
+++I+W +IA N + + +D Y M++ G PD ++ SV+ +C +L+ G++I
Sbjct: 269 KSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRI 328
Query: 95 HAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKG 154
H V + ++ + ++LI MY++CGCL ++ F + + DVV W+SMI+AYG G+G
Sbjct: 329 HEYVERKKLRPNLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQG 388
Query: 155 EEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC 214
++A+ LF++M F + + FVS+L ACSH GL ++G F+LM + Y P +EHY C
Sbjct: 389 KDAVALFKKMRDSGFTPDWIAFVSVLAACSHAGLVDEGRYCFNLMAE-YGITPGIEHYNC 447
Query: 215 VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQD 274
+VDLLGR G +DEA L R MP++ N +W +LLSAC+ + S ++A A+ + + P+
Sbjct: 448 MVDLLGRAGKIDEAYHLTRQMPMEPNERVWGSLLSACRVYSSMNIALLAADHLFQLAPEQ 507
Query: 275 AAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRS 334
+ YVLLSNI+A A RWQ V R M + +KK PG S +EI + V+ F GD+SH +S
Sbjct: 508 SGYYVLLSNIYAKAGRWQDVETVRSIMNSKGIKKIPGNSNVEINDHVYTFLAGDQSHTQS 567
Query: 335 MEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFA--------- 385
EI L L MK GY+P+T + +HD++ E+KE +L HSEKLAI FA
Sbjct: 568 KEIYKALGVLVGRMKELGYMPETDSALHDVEEEDKECHLAVHSEKLAIVFAILNTKPGST 627
Query: 386 -EHTRGLIVM----LPFKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
T+ + V + K IS+I REII+RD RFHHFR+G CSCGDYW
Sbjct: 628 IRITKNIRVCGDCHVATKLISKIAEREIIIRDTHRFHHFRDGVCSCGDYW 677
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 128/278 (46%), Gaps = 9/278 (3%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G L Y G + + +NV+ + +I NGL +D L + M GF
Sbjct: 74 GIKLMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMANQGF 133
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
PD T+ V+ +CS L G QIH VVK G +++ + + L+SMY +C LD + +
Sbjct: 134 YPDNYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARR 193
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
E D+V W+SM+A Y +G+ +A+ L +ME + + + T SLL A ++
Sbjct: 194 VLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPAVTNTSC 253
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP---VKANAIIWK 245
+ + D+ VK ++ L + ++ + +EA L M V+ +A+
Sbjct: 254 -DNVLYVKDMFVK--LKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSIS 310
Query: 246 TLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSN 283
++L AC + + RI E V + P +LL N
Sbjct: 311 SVLPACGDLSAAVLGRRIHEY---VERKKLRPNLLLEN 345
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 77/145 (53%), Gaps = 3/145 (2%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
+L+ ++L MY K G L E V M R+V++W ++I+ +G +D + + MR
Sbjct: 340 NLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVALFKKMR 399
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
GF PD I FVSV+++CS + +G+ + + G + + + ++ + R G +D
Sbjct: 400 DSGFTPDWIAFVSVLAACSHAGLVDEGRYCFNLMAEYGITPGIEHYNCMVDLLGRAGKID 459
Query: 125 DS--VKTFLECEYSDVVLWSSMIAA 147
++ + + E ++ V W S+++A
Sbjct: 460 EAYHLTRQMPMEPNERV-WGSLLSA 483
>gi|224055823|ref|XP_002298671.1| predicted protein [Populus trichocarpa]
gi|222845929|gb|EEE83476.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 330 bits (846), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 171/444 (38%), Positives = 263/444 (59%), Gaps = 25/444 (5%)
Query: 7 VAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV 66
V+ +++ Y +SG E ++ P+RN+ +W LI+G Q+G D + MR
Sbjct: 171 VSWTAMLSGYARSGLKDEAMELFLRTPVRNLYSWTALISGLVQSGYCIDGCYMFIEMRRE 230
Query: 67 GFR-PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD 125
G D + SV+ +C+ LA LG G+QIH V+ +G + + ++L+ MY++C +
Sbjct: 231 GVDIVDPLVLSSVVGACANLAVLGLGKQIHGLVIGSGYESCLFISNALVDMYAKCSDILA 290
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
+ F + DVV W+S+I HG+ +EA++L++QM E + N+VTFV L+YACSH
Sbjct: 291 ARNVFNRMLHRDVVSWTSIIVGAAQHGRAKEALDLYDQMVLAEIKPNEVTFVGLIYACSH 350
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
GL KG + F M++ YR P L+ +TC +DLL R G+L+EA LI+ MP K + W
Sbjct: 351 AGLVSKGRKLFKAMIEDYRISPSLQLFTCFLDLLSRSGHLNEAEDLIKTMPHKPDEPTWA 410
Query: 246 TLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERN 305
LLSACK H +T+M RIA+ +L +N + + YVLLSN++A A +W+ +S R+ M +
Sbjct: 411 ALLSACKHHGNTEMGVRIADRLLSLNMHEPSTYVLLSNVYAGAGKWEQMSRVRKLMTDME 470
Query: 306 VKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMD 365
VK++PG S +++ + F G+ HP EI L+EL +EM+ RGY+PDT +HDM+
Sbjct: 471 VKRKPGYSSIDLGKESQVFHAGETCHPMKDEIFGLLKELDAEMRKRGYIPDTSYVLHDME 530
Query: 366 SEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNR 406
+EKE L HSE+ A+A+ GL+ +P K S I ++
Sbjct: 531 EQEKERELFWHSERWAVAY-----GLLKAVPGTVIRIVKNLRICGDCHTFLKLTSSIVHK 585
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EIIVRDA+R+HHF++G+CSC D+W
Sbjct: 586 EIIVRDATRYHHFKDGRCSCNDFW 609
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 97/187 (51%), Gaps = 7/187 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+E L ++L MY K ++ V M R+V++W ++I G AQ+G A++ LD Y
Sbjct: 267 GYESCLFISNALVDMYAKCSDILAARNVFNRMLHRDVVSWTSIIVGAAQHGRAKEALDLY 326
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVK-AGASLDVGVISSLISMYSR 119
+ M + +P+++TFV +I +CS + +G+++ +++ S + + + + + SR
Sbjct: 327 DQMVLAEIKPNEVTFVGLIYACSHAGLVSKGRKLFKAMIEDYRISPSLQLFTCFLDLLSR 386
Query: 120 CGCLD---DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEF-EANDVT 175
G L+ D +KT D W+++++A HG E + + +++ E +
Sbjct: 387 SGHLNEAEDLIKTMP--HKPDEPTWAALLSACKHHGNTEMGVRIADRLLSLNMHEPSTYV 444
Query: 176 FVSLLYA 182
+S +YA
Sbjct: 445 LLSNVYA 451
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 74/153 (48%), Gaps = 1/153 (0%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVG-F 68
++L Y K L + + MP R+ ++W +++ Q L L ++ M
Sbjct: 41 NTLLDAYGKCNLLQDAHYLFDEMPQRDHVSWASILTAYNQAKLPNKTLSIFHYMFTTDRL 100
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
+PD + +++ +C+ L +L G+Q+HA V + D V SSL+ MY++CG +
Sbjct: 101 QPDHFVYATLLKACASLCSLRLGKQVHARFVLSPFVDDDVVKSSLVDMYAKCGLPSIARS 160
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLF 161
F V W++M++ Y G +EA+ LF
Sbjct: 161 VFDSILVKTSVSWTAMLSGYARSGLKDEAMELF 193
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 85/179 (47%), Gaps = 5/179 (2%)
Query: 74 TFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLEC 133
+++ + C++ ++IHA++VK+G + + ++L+ Y +C L D+ F E
Sbjct: 4 SYLHRLKLCTKHQAPLNAKKIHAQIVKSGLNQCQPLPNTLLDAYGKCNLLQDAHYLFDEM 63
Query: 134 EYSDVVLWSSMIAAYGFHGKGEEAINLFEQM-EQKEFEANDVTFVSLLYAC-SHCGLKEK 191
D V W+S++ AY + +++F M + + + +LL AC S C L+
Sbjct: 64 PQRDHVSWASILTAYNQAKLPNKTLSIFHYMFTTDRLQPDHFVYATLLKACASLCSLRLG 123
Query: 192 GMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
++ + ++ + +VD+ +CG A ++ ++ VK ++ W +LS
Sbjct: 124 KQVHARFVLSPFVDDDVVK--SSLVDMYAKCGLPSIARSVFDSILVK-TSVSWTAMLSG 179
>gi|147770672|emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]
Length = 704
Score = 330 bits (846), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 172/440 (39%), Positives = 264/440 (60%), Gaps = 15/440 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ +L MY K GS+ + + V MP + + W ++IAG A +G +E+ L Y MR
Sbjct: 266 DVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMR 325
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G + D TF +I C+ LA+L +Q HA +V+ G LD+ ++L+ +YS+ G ++
Sbjct: 326 DSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIE 385
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D+ F + +V+ W+++IA YG HG+G EA+ +FE+M + N VTF+++L ACS
Sbjct: 386 DAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACS 445
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
+ GL ++G E F+ M + ++ KPR HY C+++LLGR G LDEA ALI++ P K +W
Sbjct: 446 YSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIKDAPFKPTVNMW 505
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
LL+AC+ HK+ ++ AE++ G+ P+ + YV+L NI+ + R + + + ++ R
Sbjct: 506 AALLTACRVHKNFELGKFAAEKLYGMGPEKLSNYVVLLNIYNXSGRLEEAAAVIQTLKRR 565
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
++ P SW+EIK Q + F GDK H +S EI L+EL E+ GYVP + D+
Sbjct: 566 GLRMLPACSWIEIKKQPYGFISGDKCHAQSKEIYQKLDELMLEISKHGYVPQXKFLLPDV 625
Query: 365 DSEEKEYNLKHHSEKLAIAF-----AEHTRGLIVM---------LPFKYISEIKNREIIV 410
D E++E L +HSEKLAIAF ++ T IV K I+ + REI+V
Sbjct: 626 D-EQEERVLLYHSEKLAIAFGLINTSDWTPLQIVQSHRICGDCHSAIKLIALVTRREIVV 684
Query: 411 RDASRFHHFRNGKCSCGDYW 430
RDASRFHHF++G CSCGDYW
Sbjct: 685 RDASRFHHFKDGSCSCGDYW 704
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 139/306 (45%), Gaps = 26/306 (8%)
Query: 15 MYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKIT 74
M++K G +++ ++ MP +N+++W T+I G G + + +M
Sbjct: 175 MHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQXFSDAGSRM 234
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
FV++I + + L + G+Q+H+ +K G DV V +LI MYS+CG ++D+ F +
Sbjct: 235 FVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMP 294
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC----------- 183
V W+S+IA Y HG EEA++++ +M + ++ TF ++ C
Sbjct: 295 EKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQ 354
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
+H GL G D++ T +VDL + G +++A + MP K N I
Sbjct: 355 AHAGLVRHGFG-LDIVAN-----------TALVDLYSKWGRIEDAKHVFDMMPHK-NVIS 401
Query: 244 WKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
W L++ H A + E +L G+ P +LS S +G F
Sbjct: 402 WNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMS 461
Query: 302 RERNVK 307
R+ +K
Sbjct: 462 RDHKIK 467
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 100/208 (48%), Gaps = 5/208 (2%)
Query: 55 DVLDQYNLMRMVG-FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSL 113
+ L+ + ++ + G + D T+ +++S+C L ++ +++ ++ +G D + + +
Sbjct: 113 EALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRV 172
Query: 114 ISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEAND 173
+ M+ +CG + D+ + F E +++ W+++I G EA LF M Q +A
Sbjct: 173 LLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQXFSDAGS 232
Query: 174 VTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC-VVDLLGRCGYLDEAAALI 232
FV+++ A + GL G + +K C ++D+ +CG +++A +
Sbjct: 233 RMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVF--VACALIDMYSKCGSIEDAQCVF 290
Query: 233 RNMPVKANAIIWKTLLSACKTHKSTDMA 260
MP K + W ++++ H ++ A
Sbjct: 291 DQMPEK-TTVGWNSIIAGYALHGYSEEA 317
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 330 bits (846), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 164/423 (38%), Positives = 249/423 (58%), Gaps = 14/423 (3%)
Query: 22 LVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISS 81
L+ K+ +M +RN ++W +I G + ++ LD + +M++ G PD T + V+ +
Sbjct: 223 LLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGIDPDLTTMLGVLPA 282
Query: 82 CSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLW 141
CS LA L G H ++ G + D + ++LI MYS+CG + + + F + D+V W
Sbjct: 283 CSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSW 342
Query: 142 SSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVK 201
++MI YG HG G EA+ LF + + +D+TF+ LL +CSH GL +G +FD M +
Sbjct: 343 NAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSR 402
Query: 202 KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAG 261
+ PR+EH C+VD+LGR G +DEA IRNMP + + IW LLSAC+ HK+ ++
Sbjct: 403 DFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGE 462
Query: 262 RIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQV 321
++++I + P+ +VLLSNI+++A RW + R ++ +KK PG SW+EI V
Sbjct: 463 EVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIV 522
Query: 322 HQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLA 381
H F GD+SH + +I+ LEEL EMK GY + D++ EEKE L +HSEKLA
Sbjct: 523 HAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLA 582
Query: 382 IAFA----EHTRGLIVM----------LPFKYISEIKNREIIVRDASRFHHFRNGKCSCG 427
IAF + R ++V K+++ I REI VRDA+RFHHF+NG C+CG
Sbjct: 583 IAFGILNLKAGRPILVTKNLRVCGDCHTAIKFMTLITKREITVRDANRFHHFKNGTCNCG 642
Query: 428 DYW 430
D+W
Sbjct: 643 DFW 645
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 99/188 (52%), Gaps = 3/188 (1%)
Query: 12 LAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPD 71
L +Y+ +V ++ +P +VI W +I A NG + +D Y+ M +G RP+
Sbjct: 49 LTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPN 108
Query: 72 KITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFL 131
K T+ V+ +CS L + G +IH+ G DV V ++L+ Y++CG L ++ + F
Sbjct: 109 KYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFS 168
Query: 132 ECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEK 191
+ DVV W++MIA +G ++A+ L QM+++ N T V +L C C L +
Sbjct: 169 SMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTC-QCLLYAR 227
Query: 192 GMEFFDLM 199
+ FD+M
Sbjct: 228 --KIFDVM 233
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 98/207 (47%), Gaps = 4/207 (1%)
Query: 72 KITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFL 131
K ++ ++ +C + +L + ++IH +K ++ D V+ L +Y C + + + F
Sbjct: 8 KNNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFD 67
Query: 132 ECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEK 191
E V+LW+ +I AY ++G + AI+L+ M N T+ +L ACS E
Sbjct: 68 EIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIED 127
Query: 192 GMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSAC 251
G+E K + + + T +VD +CG L EA L +M + + + W +++ C
Sbjct: 128 GVEIHS-HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHR-DVVAWNAMIAGC 185
Query: 252 KTHKSTDMAGRIAEEIL--GVNPQDAA 276
+ D A ++ ++ G+ P +
Sbjct: 186 SLYGLCDDAVQLIMQMQEEGICPNSST 212
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 84/174 (48%), Gaps = 16/174 (9%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D + ++L MY K G + +V M ++++W +I G +GL + L +
Sbjct: 303 GFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLF 362
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVIS------SLI 114
+ + +G +PD ITF+ ++SSCS + +G+ + S D ++ ++
Sbjct: 363 HDLLALGLKPDDITFICLLSSCSHSGLVMEGR-----LWFDAMSRDFSIVPRMEHCICMV 417
Query: 115 SMYSRCGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQK 167
+ R G +D++ + DV +WS++++A H + I L E++ +K
Sbjct: 418 DILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIH----KNIELGEEVSKK 467
>gi|108862088|gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 330 bits (846), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 173/450 (38%), Positives = 255/450 (56%), Gaps = 26/450 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + ++ +Y+K G + + +V M ++ +AW ++ G A NG + LD +
Sbjct: 249 GIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLF 308
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVI-SSLISMYSR 119
M+ G RPD +S+C+ L L G+Q +V LD V+ ++LI MY++
Sbjct: 309 LAMQAEGVRPDCYAVAGALSACTRLGALDLGRQA-IRMVDWDEFLDNPVLGTALIDMYAK 367
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG ++ F + D+++W++MI G G + A L QME+ + ND TF+ L
Sbjct: 368 CGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGL 427
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L +C+H GL + G +F M K Y PR+EHY C+VDLL R G L EA LI +MP+ A
Sbjct: 428 LCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPA 487
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
NA+I LL CK H++ ++A + +++ + P ++ YV+LSNI+++ RW+ ++ R
Sbjct: 488 NAVILGALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLSNIYSNRGRWEDAAKLRL 547
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M+E+ V+K P SW+E + +VH+F +GDKSHP S +I L+EL EMK GY P T
Sbjct: 548 DMKEKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEV 607
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYI 400
M D++ EEKE+ L HHSEKLAIAF L+V P K I
Sbjct: 608 VMFDVEDEEKEHTLVHHSEKLAIAF-----NLLVTGPGETIRVTKNLRVCSDCHTAIKLI 662
Query: 401 SEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
S I +REIIVRD +RFH FR+G CSC DYW
Sbjct: 663 SRITHREIIVRDNNRFHCFRDGSCSCNDYW 692
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 115/243 (47%), Gaps = 10/243 (4%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV--- 66
+SL +Y + G L ++V MP + ++W LI G D+ + ++ R
Sbjct: 157 TSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITAYMDAG---DLREAVHVARNAFAN 213
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
G RPD T V V+++C+ +A L G+ + + G + V V ++ + +Y +CG + +
Sbjct: 214 GMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKA 273
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHC 186
+ F + D V W +M+ Y +G EA++LF M+ + + L AC+
Sbjct: 274 REVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRL 333
Query: 187 GLKEKGMEFFDLM-VKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
G + G + ++ ++ P L T ++D+ +CG EA + + M K + I+W
Sbjct: 334 GALDLGRQAIRMVDWDEFLDNPVLG--TALIDMYAKCGSTAEAWVVFQQM-RKKDIIVWN 390
Query: 246 TLL 248
++
Sbjct: 391 AMI 393
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 93/206 (45%), Gaps = 5/206 (2%)
Query: 70 PDKITFVSVISSCSELA-TLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
P +TF + S S L L G+Q+HA +K + + V++SL+++Y+RCG L + +
Sbjct: 115 PSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQR 174
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F E + V W+++I AY G EA+++ + T V +L AC+
Sbjct: 175 VFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVAD 234
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
G + ++ + T VDL +CG + +A + M K +A+ W ++
Sbjct: 235 LATGETVWRAAEQEGIAQSVFV-ATAAVDLYVKCGEMAKAREVFDKMRDK-DAVAWGAMV 292
Query: 249 S--ACKTHKSTDMAGRIAEEILGVNP 272
A H + +A + GV P
Sbjct: 293 GGYASNGHPREALDLFLAMQAEGVRP 318
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 330 bits (846), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 159/445 (35%), Positives = 261/445 (58%), Gaps = 24/445 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+++ +++ + G + MP ++ ++W +I G ++ ++ L+ + M+
Sbjct: 284 DIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQ 343
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+PD+ T VSV+++C+ L L G+ I + + D+ V ++LI MY +CG +D
Sbjct: 344 ATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVD 403
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ F E D W++MI +G GE+A+++F M + +++T++ +L AC+
Sbjct: 404 KAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACT 463
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL +KG ++F M ++ +P + HY C+VDLL R G L EA +I NMP+KAN+I+W
Sbjct: 464 HTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVW 523
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
LL+ C+ ++ +DMA + ++IL + P + A YVLL NI+A+ KRW + E R+ M ++
Sbjct: 524 GALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDK 583
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
+KK PG S +E+ +VH+F GD+SHP++ ID L+++T ++KL GY PD D+
Sbjct: 584 GIKKTPGCSLIEMNGRVHEFVAGDRSHPQTKNIDAKLDKMTQDLKLAGYSPDISEVFLDI 643
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKN 405
E+KE ++ HSEKLAIAF GLI P K +S++ N
Sbjct: 644 AEEDKENSVFRHSEKLAIAF-----GLINSPPGVTIRITKNLRMCMDCHNMAKLVSKVYN 698
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
RE+IVRD +RFHHF++G CSC DYW
Sbjct: 699 REVIVRDRTRFHHFKHGLCSCKDYW 723
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 134/290 (46%), Gaps = 5/290 (1%)
Query: 20 GSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVI 79
G ++ +P N+ W T+I G ++ + + Y M G +PD+ TF +
Sbjct: 66 GDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLF 125
Query: 80 SSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVV 139
+ L G+Q+H V+K G +V V ++L+ MY CG LD + F C +DV+
Sbjct: 126 KGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVI 185
Query: 140 LWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLM 199
W+ +I+AY GK EE+ LF ME K+ VT V +L ACS G +
Sbjct: 186 TWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSY- 244
Query: 200 VKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDM 259
VK + + L ++D+ CG +D A + R+M + + I W T++S D+
Sbjct: 245 VKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNR-DIISWTTIVSGFTNLGEIDV 303
Query: 260 AGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKE 309
A +++ +D + + + + + R++ E M+ NVK +
Sbjct: 304 ARNYFDKM---PEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPD 350
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 128/281 (45%), Gaps = 37/281 (13%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + ++ ++L MY+ G L V + P +VI W +I+ + G E+ +
Sbjct: 148 GLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLF 207
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+M P +T V V+S+CS+L L G+++H+ V ++ + +++I MY+ C
Sbjct: 208 LVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADC 267
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGE------------------------- 155
G +D ++ F D++ W+++++ GF GE
Sbjct: 268 GEMDSALGIFRSMNNRDIISWTTIVS--GFTNLGEIDVARNYFDKMPEKDYVSWTAMIDG 325
Query: 156 --------EAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKP 207
EA+ LF M+ + ++ T VS+L AC+H G E G E+ + + + K
Sbjct: 326 YIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELG-EWIRTYIDRNKIKN 384
Query: 208 RLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
L ++D+ +CG +D+A ++ R M + + W ++
Sbjct: 385 DLFVRNALIDMYFKCGDVDKAESIFREMS-QRDKFTWTAMI 424
>gi|356534396|ref|XP_003535741.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g04780-like [Glycine max]
Length = 632
Score = 330 bits (846), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 165/448 (36%), Positives = 272/448 (60%), Gaps = 34/448 (7%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L H+Y K S+ + ++ MP +N + W +++AG QNG ++ L ++ +++GF
Sbjct: 190 TALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHDEALLLFHNAQLMGFD 249
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
D S +S+C+ LATL +G+Q+HA K+G ++ V SSLI MY++CGC+ ++
Sbjct: 250 QDPFNISSAVSACAGLATLVEGKQVHAMSHKSGFGSNIYVASSLIDMYAKCGCIREAYLV 309
Query: 130 FLE-CEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F E +VLW++MI+ + H +EA+ LFE+M+Q+ F +DVT+VS+L ACSH GL
Sbjct: 310 FEGFVEVRSIVLWNAMISGFARHALAQEAMILFEKMQQRGFFPDDVTYVSVLNACSHMGL 369
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKT-- 246
E+G ++FDLMV+++ P + HY+C++D+LGR G + +A LI M A + +W +
Sbjct: 370 HEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVQKAYDLIGRMSFNATSSMWGSVR 429
Query: 247 -----LLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
+ ++C+ + + + A A+ + + P +A ++LL+NI+A+ K+ V+ R+ +
Sbjct: 430 GLSXLIKASCRIYGNIEFAEIAAKHLFEMEPNNAGNHILLANIYAANKKSDEVARARKLL 489
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
RE +V+KE G SW+EIKN++H FT+G+++HP+ + L+ L E+K Y DT D+
Sbjct: 490 RETDVRKERGTSWIEIKNKIHSFTVGERNHPQIDDNYAKLDNLVVELKKLNYKVDTNNDL 549
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP--------------------FKYIS 401
HD++ K L HHSEKLAI F +V LP K +S
Sbjct: 550 HDVEESRKHMLLGHHSEKLAITFG------LVCLPTEIPIRIIKNLRICGDCHTFMKLVS 603
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDY 429
+ +REIIVRD +RFHHF++G CSCG++
Sbjct: 604 KFASREIIVRDTNRFHHFKDGLCSCGEF 631
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 137/310 (44%), Gaps = 7/310 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E+D++ + L +MY K + K M ++++I T I QN AED
Sbjct: 80 GLEMDILTSTMLINMYSKCSLVHSTRKKXDEMLVKSLILXNTRIGALTQN--AEDRKALK 137
Query: 61 NLMRMVG-FRP-DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
L+RM P ++ T SV+ +C+ + + Q+HA +KA + V ++L+ +Y+
Sbjct: 138 LLIRMQREVTPFNEFTISSVLCNCAFKCAILECMQLHAFSIKAAIDSNCFVXTALLHVYA 197
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+C + D+ + F + V WSSM+A Y +G +EA+ LF + F+ + S
Sbjct: 198 KCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHDEALLLFHNAQLMGFDQDPFNISS 257
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+ AC+ +G + M K + + ++D+ +CG + EA +
Sbjct: 258 AVSACAGLATLVEGKQ-VHAMSHKSGFGSNIYVASSLIDMYAKCGCIREAYLVFEGFVEV 316
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSE 296
+ ++W ++S H A + E++ G P D +L+ +G
Sbjct: 317 RSIVLWNAMISGFARHALAQEAMILFEKMQQRGFFPDDVTYVSVLNACSHMGLHEEGQKY 376
Query: 297 FREAMRERNV 306
F +R+ N+
Sbjct: 377 FDLMVRQHNL 386
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 85/170 (50%), Gaps = 4/170 (2%)
Query: 82 CSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLW 141
C++ + G+ HA++++ G +D+ + LI+MYS+C + + K E ++L
Sbjct: 60 CAKTGSSMGGRACHAQIIRIGLEMDILTSTMLINMYSKCSLVHSTRKKXDEMLVKSLILX 119
Query: 142 SSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS-HCGLKEKGMEFFDLMV 200
++ I A + + +A+ L +M+++ N+ T S+L C+ C + E M+ +
Sbjct: 120 NTRIGALTQNAEDRKALKLLIRMQREVTPFNEFTISSVLCNCAFKCAILE-CMQLHAFSI 178
Query: 201 KKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
K T ++ + +C + +A+ + +MP K NA+ W ++++
Sbjct: 179 KAAIDSNCFV-XTALLHVYAKCSSIKDASQMFESMPEK-NAVTWSSMMAG 226
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 330 bits (846), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 163/443 (36%), Positives = 259/443 (58%), Gaps = 15/443 (3%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
+L++++ ++L Y+K G + ++ +M R+V+AW +I G QNG ++ +D +
Sbjct: 362 DLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRS 421
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M G P+ T +V+S C+ LA L G+QIH +++ V +++I+MY+R G
Sbjct: 422 MITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSSVSNAIITMYARSGS 481
Query: 123 LDDSVKTFLE-CEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+ + F + C + + W+SMI A HG+GEEA+ LFE+M + E + +T+V +L
Sbjct: 482 FPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLS 541
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
ACSH G +G ++D + +++ P + HY C+VDLL R G EA IR MPV+ +A
Sbjct: 542 ACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDA 601
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
I W +LLSAC+ HK+ ++A AE++L ++P ++ Y ++N++++ RW + +A
Sbjct: 602 IAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKAR 661
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
+E+ V+KE G SW I++++H F D HP+ + + E+K G+VPD + +
Sbjct: 662 KEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVL 721
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFA----EHTRGLIVM----------LPFKYISEIKNRE 407
HD+D E KE L HSEKLAIAF L VM K IS++ +RE
Sbjct: 722 HDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCNDCHAAIKAISKVTDRE 781
Query: 408 IIVRDASRFHHFRNGKCSCGDYW 430
IIVRDA+RFHHFR+G CSC DYW
Sbjct: 782 IIVRDATRFHHFRDGLCSCKDYW 804
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 122/263 (46%), Gaps = 13/263 (4%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+SL M+ KSG L + V MP R+ ++W ++ G + G + + M GF
Sbjct: 102 NSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFT 161
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P + T +V+SSC+ G+++H+ VVK G V V +S+++MY +CG + +
Sbjct: 162 PTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETASTV 221
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F V W++M++ G+ + A +LFE M + V++ +++ + GL
Sbjct: 222 FERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSI----VSWNAMIAGYNQNGLD 277
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYL------DEAAALIRNMPVKANAII 243
K ++ F M+ + P + +T + +L C L + A I + N+ +
Sbjct: 278 AKALKLFSRMLHESSMAP--DEFT-ITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQV 334
Query: 244 WKTLLSACKTHKSTDMAGRIAEE 266
L+S S + A RI ++
Sbjct: 335 TNALISTYAKSGSVENARRIMDQ 357
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 90/238 (37%), Gaps = 51/238 (21%)
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAG-------------------------------- 102
+ ++ C A G G+ IHA VKAG
Sbjct: 29 YARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLF 88
Query: 103 -----ASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEA 157
A +V +SL+SM+++ G L D+ F E D V W+ M+ G+ EA
Sbjct: 89 DEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEA 148
Query: 158 INLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC--- 214
I M F T ++L +C+ G + +VK L +C
Sbjct: 149 IKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVK-------LGLGSCVPV 201
Query: 215 ---VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILG 269
V+++ G+CG + A+ + MPV++ + W ++S D+A + E + G
Sbjct: 202 ANSVLNMYGKCGDAETASTVFERMPVRSVS-SWNAMVSLNTHLGRMDLAESLFESMPG 258
>gi|302768267|ref|XP_002967553.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
gi|300164291|gb|EFJ30900.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
Length = 670
Score = 330 bits (846), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 177/430 (41%), Positives = 259/430 (60%), Gaps = 15/430 (3%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR-MVGFRPDKIT 74
Y G E ++ R M + + W +IA AQ+G + LD Y M P + T
Sbjct: 241 YKLDGRDREALELFREMHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGT 300
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
FV+VI C+EL+ L QG+ IHA V ++ V ++L+ MY +CGCLD+++ F +
Sbjct: 301 FVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMK 360
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGME 194
D + W+++I++Y +HG ++A+ L+++M+ + + +VTFV LL ACSH GL G++
Sbjct: 361 LKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGLD 420
Query: 195 FFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
+F M +R KP + H+ C++DLLGR G L EA ++++MP++ANA+ W +LL ACKTH
Sbjct: 421 YFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKTH 480
Query: 255 KSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSW 314
R A++++ P + YVLLSNI+A+A RW+ V + R+ M R VKK PG SW
Sbjct: 481 GDLKRGVRAADQVVDRVPWTSGGYVLLSNIYAAAGRWKDVEKIRKIMAARGVKKSPGKSW 540
Query: 315 LEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLK 374
+EI + VH+F GD SHP+ EI + L ++ EMK GYVPDT + HD++ EEKE L
Sbjct: 541 IEIGDVVHEFVSGDSSHPQGEEIYVELGKMVEEMKGLGYVPDTSSVFHDLEEEEKEDLLV 600
Query: 375 HHSEKLAIAFAEH----------TRGLIVML----PFKYISEIKNREIIVRDASRFHHFR 420
HSEKLAI + + L V L K++S I R+I+VRDA+RFH F
Sbjct: 601 CHSEKLAIVYGNMVVPGKSMLRIVKNLRVCLDCHTATKFMSRITGRKIVVRDAARFHLFE 660
Query: 421 NGKCSCGDYW 430
NG CSC DYW
Sbjct: 661 NGSCSCRDYW 670
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 146/307 (47%), Gaps = 38/307 (12%)
Query: 12 LAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPD 71
L MY K G L ++ MP RNV W +A + NG + L + M G RPD
Sbjct: 103 LIEMYGKCGRLPYARELFESMPSRNVHTWTVAMAAFSHNGCHSEALVFFRRMYQSGERPD 162
Query: 72 KITFVSVISSCSELAT--LGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
++TF ++++ +++ + QG++IH +G +V V +++ISMY +CG LDD+
Sbjct: 163 RVTFSVILAAIAQMGAAAIDQGREIHRYARISGLLPNVVVGTAVISMYGKCGRLDDARAA 222
Query: 130 FLECEY-------------------------------SDVVLWSSMIAAYGFHGKGEEAI 158
F E ++ +D V W++MIAAY HG+G++A+
Sbjct: 223 FEELQWKNSVTWNAMMTNYKLDGRDREALELFREMHDADSVCWNAMIAAYAQHGRGKQAL 282
Query: 159 NLFEQM-EQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVD 217
+L+ M + + TFV+++ C+ ++G V+ L +V
Sbjct: 283 DLYRSMHDTTDLAPKQGTFVTVIDVCAELSALKQG-RAIHARVRATNFDANLLVSNALVH 341
Query: 218 LLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEE--ILGVNPQDA 275
+ G+CG LDEA + +M +K + I W T++S+ H +D A + +E + GV P +
Sbjct: 342 MYGKCGCLDEALDVFHSMKLK-DEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEV 400
Query: 276 APYVLLS 282
LLS
Sbjct: 401 TFVGLLS 407
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 89/195 (45%), Gaps = 21/195 (10%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F+ +L+ ++L HMY K G L E V M +++ I+W T+I+ A +G ++ L Y
Sbjct: 329 FDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDEISWNTIISSYAYHGHSDQALLLYQ 388
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQG----------QQIHAEVVKAGASLDVGVIS 111
M + G +P ++TFV ++S+CS + G +I V G
Sbjct: 389 EMDLQGVKPTEVTFVGLLSACSHGGLVADGLDYFYRMQDDHRIKPSVPHFGC-------- 440
Query: 112 SLISMYSRCGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQ-MEQKEF 169
+I + R G L ++ ++ V W S++ A HG + + +Q +++ +
Sbjct: 441 -IIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKTHGDLKRGVRAADQVVDRVPW 499
Query: 170 EANDVTFVSLLYACS 184
+ +S +YA +
Sbjct: 500 TSGGYVLLSNIYAAA 514
>gi|15229764|ref|NP_187753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169981|sp|Q9CAY1.1|PP223_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g11460
gi|12322902|gb|AAG51440.1|AC008153_13 hypothetical protein; 50785-52656 [Arabidopsis thaliana]
gi|332641528|gb|AEE75049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 623
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 178/450 (39%), Positives = 259/450 (57%), Gaps = 32/450 (7%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + ++ +S MYMK GS+ G ++ MP++ +I W +I+G +QNGLA DVL+ Y
Sbjct: 186 GLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELY 245
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G PD T VSV+SSC+ L G ++ V G +V V ++ ISMY+RC
Sbjct: 246 EQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARC 305
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L + F +V W++MI YG HG GE + LF+ M ++ + FV +L
Sbjct: 306 GNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVL 365
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL +KG+E F M ++Y+ +P EHY+C+VDLLGR G LDEA I +MPV+ +
Sbjct: 366 SACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPD 425
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+W LL ACK HK+ DMA +++ P + YVL+SNI++ +K +G+ R
Sbjct: 426 GAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVM 485
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEEL-TSEMKLRGYVPDTGA 359
MRER +K+PG S++E K +VH F GD+SH ++ E+ L+EL TS M+L G
Sbjct: 486 MRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELAG------- 538
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYI 400
+M EE + HSE+LAIAF G++ +P K +
Sbjct: 539 NMDCDRGEEVSSTTREHSERLAIAF-----GILNSIPGTEILVIKNLRVCEDCHVFLKQV 593
Query: 401 SEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
S+I +R+ +VRDASRFH+F++G CSC DYW
Sbjct: 594 SKIVDRQFVVRDASRFHYFKDGVCSCKDYW 623
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 149/315 (47%), Gaps = 8/315 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRN--VIAWITLIAGKAQNGLAEDVLD 58
G E + ++L MY K G + + KV P + + + LI+G N D
Sbjct: 83 GCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAY 142
Query: 59 QYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
+ M+ G D +T + ++ C+ L G+ +H + VK G +V V++S I+MY
Sbjct: 143 MFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYM 202
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+CG ++ + F E ++ W+++I+ Y +G + + L+EQM+ + T VS
Sbjct: 203 KCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVS 262
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+L +C+H G K+ G E L V+ P + + + RCG L +A A+ MPVK
Sbjct: 263 VLSSCAHLGAKKIGHEVGKL-VESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVK 321
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSE 296
+ + W ++ H ++ + ++++ G+ P A ++LS S +G+
Sbjct: 322 S-LVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLEL 380
Query: 297 FREAMRERNVKKEPG 311
FR RE K EPG
Sbjct: 381 FRAMKRE--YKLEPG 393
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 98/227 (43%), Gaps = 32/227 (14%)
Query: 40 WITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVV 99
W + A L + + Y M G PD +F ++ SC+ L+ GQQ+H V
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 100 KAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSD--VVLWSSMIAAYGFHGKGEEA 157
K G + V+++LISMY +CG + D+ K F E S V ++++I+ Y + K +A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 158 INLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV-- 215
+F +M++ + VT + L+ C+ V +Y R H CV
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCT---------------VPEYLWLGRSLHGQCVKG 185
Query: 216 ------------VDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+ + +CG ++ L MPVK I W ++S
Sbjct: 186 GLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKG-LITWNAVISG 231
>gi|298205169|emb|CBI17228.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 171/449 (38%), Positives = 259/449 (57%), Gaps = 45/449 (10%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E D SL MY+K G L G ++ P RN AE +L +
Sbjct: 168 GLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNK---------------AESIL-LW 211
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
N G RP+ +T VS + +C+++ L G++IH + G L+ G+ ++L+ MY++C
Sbjct: 212 N-----GVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKC 266
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + + F+E + D++ WS MI + HG ++A+ F +M+ ++V F+++L
Sbjct: 267 GNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAIL 326
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH G ++G+ FF+ M Y +P ++HYT +VDLLGR G LDEA + I++MP+ +
Sbjct: 327 TACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPD 386
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+IW L AC+ HK+ +MA AE++L + P+ YV LSN++A+ RW+ V R
Sbjct: 387 FVIWGALFCACRAHKNIEMAELTAEKLLQLEPKHPGSYVFLSNVYAAVGRWEDVERVRTL 446
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+ R V+K+PG S++E++ QVH F GD +H R+ EI L LEE+T+ K GY+P+T
Sbjct: 447 MKNRGVEKDPGWSYIEVEGQVHSFVAGDHAHVRAEEISLKLEEITASAKQEGYMPETAWV 506
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
+H+++ EEKE L HSEKLA+AF GLI P KY S
Sbjct: 507 LHNIEEEEKEDALGSHSEKLALAF-----GLISTAPGSTIRIVKNLRVCGDCHSMMKYAS 561
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
++ REII+RD RFHHF++G CSCGDYW
Sbjct: 562 KLSRREIILRDIKRFHHFKDGTCSCGDYW 590
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 118/281 (41%), Gaps = 34/281 (12%)
Query: 28 VIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELAT 87
+ R N+ + LI G A+N E + + LM + RPD++T V+ S + L
Sbjct: 94 IFRCFDHPNLFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVD 153
Query: 88 LGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSD----VVLWSS 143
+G G+ +H V+K G D V SL+ MY + G L ++ F E + ++LW+
Sbjct: 154 VGLGRCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNG 213
Query: 144 MIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKY 203
+ ND+T VS L AC+ G + G + +
Sbjct: 214 V-------------------------RPNDLTVVSALLACTKIGALQVGERIHNYLSSNG 248
Query: 204 RRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGR- 262
+ R T +VD+ +CG + A+ + K + + W ++ H D A +
Sbjct: 249 FQLNR-GIGTALVDMYAKCGNIKSASRVFVETKGK-DLLTWSVMIWGWAIHGCFDQALQC 306
Query: 263 -IAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMR 302
+ + G+NP + +L+ S QG++ F E+MR
Sbjct: 307 FVKMKSAGINPDEVIFLAILTACSHSGNVDQGLN-FFESMR 346
>gi|302785459|ref|XP_002974501.1| hypothetical protein SELMODRAFT_101455 [Selaginella moellendorffii]
gi|300158099|gb|EFJ24723.1| hypothetical protein SELMODRAFT_101455 [Selaginella moellendorffii]
Length = 635
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 174/449 (38%), Positives = 255/449 (56%), Gaps = 20/449 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D+ + L +MY K SL + V + R+VIAW L+A A NG D L +
Sbjct: 188 GFLADIFVANCLINMYAKCRSLADACSVFESLTSRSVIAWTALVAAYALNGFFRDALKVF 247
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
LM + G P ++TFV+V+ C+++A G G+++H V+ A + +V V ++LI+MY +C
Sbjct: 248 LLMTLDGVEPTEVTFVTVVDVCADIAVFGIGREVHG-VIDARSEANVCVGNALINMYGKC 306
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEA-----NDVT 175
D++ K F + D++ W+SMIA YG +G G +A+ ++++M++ +D+T
Sbjct: 307 ASPDEARKVFDAMQRKDIITWNSMIAVYGQNGYGFQALEIYKRMQESRMTILGITHDDIT 366
Query: 176 FVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM 235
F+ +L+ACSH GL + + + M+ Y KP C++DLLGR G+LDEA I +M
Sbjct: 367 FIGVLFACSHAGLVKDSCKLYSSMIGDYGFKPTSLQCGCLIDLLGRAGWLDEAEEFINSM 426
Query: 236 PVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVS 295
P + IW LL AC TH + A R A+ I+ + P D+ YV LSN++A A+RW ++
Sbjct: 427 PYHPDHTIWTILLGACITHADVERAARAADRIMALRPTDSGSYVALSNLYALAERWDDMA 486
Query: 296 EFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVP 355
R+ M +R V K G S +EI +H+F GD SHPR EI L + ++ RGYVP
Sbjct: 487 RMRKLMDQRGVFKMAGKSSIEIGGVLHEFIAGDTSHPRKREIYEELRRIEGVIRERGYVP 546
Query: 356 DTGADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRG----LIVMLPF----------KYIS 401
D A +H+ E KE HSE+LAIAF + L +M K IS
Sbjct: 547 DIKAVLHNAAREAKEKMCCFHSERLAIAFGMISSPGGTELRIMKNLRVCPDCHSATKIIS 606
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+ R+IIVRDA+RFH FRNG CSC DYW
Sbjct: 607 KFSGRKIIVRDANRFHEFRNGSCSCEDYW 635
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 126/253 (49%), Gaps = 11/253 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ + L MY K GSL + V + P RNV +W ++A A NG D L+
Sbjct: 87 GFKSSRYLCNLLVEMYGKCGSLQAAKSVFHITPRRNVFSWTIMVAAFAHNGHYMDALNLL 146
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+M + G P+ ITF+ ++ + + L+ L +G+ +H + G D+ V + LI+MY++C
Sbjct: 147 EIMDLEGISPNSITFIELLGAVAALSWLDRGRALHRRIACCGFLADIFVANCLINMYAKC 206
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
L D+ F V+ W++++AAY +G +A+ +F M E +VTFV+++
Sbjct: 207 RSLADACSVFESLTSRSVIAWTALVAAYALNGFFRDALKVFLLMTLDGVEPTEVTFVTVV 266
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV----VDLLGRCGYLDEAAALIRNMP 236
C+ + G E ++ R E CV +++ G+C DEA + M
Sbjct: 267 DVCADIAVFGIGREVHGVI------DARSEANVCVGNALINMYGKCASPDEARKVFDAMQ 320
Query: 237 VKANAIIWKTLLS 249
K + I W ++++
Sbjct: 321 RK-DIITWNSMIA 332
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 88/206 (42%), Gaps = 22/206 (10%)
Query: 55 DVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLI 114
D+ D L+ P + C A + +G++IH +V G + + L+
Sbjct: 40 DLRDAVQLLEDRSVSPSAEVLAWYLRRCGSEAAIAEGKRIHYHIVLCGFKSSRYLCNLLV 99
Query: 115 SMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDV 174
MY +CG L + F +V W+ M+AA+ +G +A+NL E M+ + N +
Sbjct: 100 EMYGKCGSLQAAKSVFHITPRRNVFSWTIMVAAFAHNGHYMDALNLLEIMDLEGISPNSI 159
Query: 175 TFVSLLYACSHCGLKEKGMEFF----------DLMVKKYRRKPRLEHYTCVVDLLGRCGY 224
TF+ LL A + ++G D+ V C++++ +C
Sbjct: 160 TFIELLGAVAALSWLDRGRALHRRIACCGFLADIFVA-----------NCLINMYAKCRS 208
Query: 225 LDEAAALIRNMPVKANAIIWKTLLSA 250
L +A ++ ++ + + I W L++A
Sbjct: 209 LADACSVFESLTSR-SVIAWTALVAA 233
>gi|225456313|ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic [Vitis vinifera]
Length = 704
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 172/440 (39%), Positives = 264/440 (60%), Gaps = 15/440 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ +L MY K GS+ + + V MP + + W ++IAG A +G +E+ L Y MR
Sbjct: 266 DVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMR 325
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G + D TF +I C+ LA+L +Q HA +V+ G LD+ ++L+ +YS+ G ++
Sbjct: 326 DSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIE 385
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D+ F + +V+ W+++IA YG HG+G EA+ +FE+M + N VTF+++L ACS
Sbjct: 386 DAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACS 445
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
+ GL ++G E F+ M + ++ KPR HY C+++LLGR G LDEA ALI++ P K +W
Sbjct: 446 YSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIKDAPFKPTVNMW 505
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
LL+AC+ HK+ ++ AE++ G+ P+ + YV+L NI+ + R + + + ++ R
Sbjct: 506 AALLTACRVHKNFELGKFAAEKLYGMGPEKLSNYVVLLNIYNRSGRLEEAAAVIQTLKRR 565
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
++ P SW+EIK Q + F GDK H +S EI L+EL E+ GYVP + D+
Sbjct: 566 GLRMLPACSWIEIKKQPYGFISGDKCHAQSKEIYQKLDELMLEISKHGYVPQDKFLLPDV 625
Query: 365 DSEEKEYNLKHHSEKLAIAF-----AEHTRGLIVM---------LPFKYISEIKNREIIV 410
D E++E L +HSEKLAIAF ++ T IV K I+ + REI+V
Sbjct: 626 D-EQEERVLLYHSEKLAIAFGLINTSDWTPLQIVQSHRICGDCHSAIKLIALVTRREIVV 684
Query: 411 RDASRFHHFRNGKCSCGDYW 430
RDASRFHHF++G CSCGDYW
Sbjct: 685 RDASRFHHFKDGSCSCGDYW 704
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 148/327 (45%), Gaps = 40/327 (12%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + D + + M++K G +++ ++ MP +N+++W T+I G G D + +
Sbjct: 161 GLDPDEYLRNRVLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAG---DYFEAF 217
Query: 61 NLMRMV-------GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSL 113
L M+ G R FV++I + + L + G+Q+H+ +K G DV V +L
Sbjct: 218 RLFLMMWQDFSDAGSR----MFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACAL 273
Query: 114 ISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEAND 173
I MYS+CG ++D+ F + V W+S+IA Y HG EEA++++ +M + ++
Sbjct: 274 IDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDN 333
Query: 174 VTFVSLLYAC-----------SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRC 222
TF ++ C +H GL G D++ T +VDL +
Sbjct: 334 FTFSIIIRICARLASLEHAKQAHAGLVRHGFG-LDIVAN-----------TALVDLYSKW 381
Query: 223 GYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVL 280
G +++A + MP K N I W L++ H A + E +L G+ P +
Sbjct: 382 GRIEDAKHVFDMMPHK-NVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAV 440
Query: 281 LSNIHASAKRWQGVSEFREAMRERNVK 307
LS S +G F R+ +K
Sbjct: 441 LSACSYSGLSDRGWEIFESMSRDHKIK 467
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 100/208 (48%), Gaps = 5/208 (2%)
Query: 55 DVLDQYNLMRMVG-FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSL 113
+ L+ + ++ + G + D T+ +++S+C L ++ +++ ++ +G D + + +
Sbjct: 113 EALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRV 172
Query: 114 ISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEAND 173
+ M+ +CG + D+ + F E +++ W+++I G EA LF M Q +A
Sbjct: 173 LLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAGS 232
Query: 174 VTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC-VVDLLGRCGYLDEAAALI 232
FV+++ A + GL G + +K C ++D+ +CG +++A +
Sbjct: 233 RMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVF--VACALIDMYSKCGSIEDAQCVF 290
Query: 233 RNMPVKANAIIWKTLLSACKTHKSTDMA 260
MP K + W ++++ H ++ A
Sbjct: 291 DQMPEK-TTVGWNSIIAGYALHGYSEEA 317
>gi|225457409|ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530
[Vitis vinifera]
Length = 643
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 166/446 (37%), Positives = 263/446 (58%), Gaps = 16/446 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + D + ++L +Y E KV +P + ++W LI+ N D L +
Sbjct: 198 GHQSDNLLLTTLMDLYSCCDKFEEACKVFDEIPQWDTVSWNVLISCCIHNRRTRDALRMF 257
Query: 61 NLMRMV--GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
++M+ GF PD +T + ++ +C+ L L G+++H + + G + + +SLI+MYS
Sbjct: 258 DIMQSTADGFEPDDVTCLLLLQACANLGALEFGERVHNYIEEHGYDGALNLCNSLITMYS 317
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
RCG L+ + F + +VV WS+MI+ + HG G EAI FEQM+Q +D T
Sbjct: 318 RCGRLEKAYSIFKRMDERNVVSWSAMISGFAMHGYGREAIEAFEQMQQLGVSPDDQTLTG 377
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+L ACSHCGL + G+ FFD M K + +P + HY C+VDLLGR G LD+A LI +M +K
Sbjct: 378 VLSACSHCGLVDDGLMFFDRMSKVFGIEPNIHHYGCMVDLLGRAGLLDQAYQLIMSMVIK 437
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
++ +W+TLL AC+ H+ + R+ ++ + Q+A YVLL NI++S W V++ R
Sbjct: 438 PDSTLWRTLLGACRIHRHATLGERVIGHLIELKAQEAGDYVLLLNIYSSVGNWDKVTDLR 497
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
+ M+E+ ++ PG S +E+K +VH+F + D HPR+ EI L+E+ ++K+ GYV +
Sbjct: 498 KFMKEKGIQTSPGCSTIELKGKVHEFVVDDILHPRTDEIYEMLDEIGKQLKIAGYVAELS 557
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAF-------------AEHTRGLIVMLPF-KYISEIK 404
+++H++ +EEK L +HSEKLAIAF A++ R + F K +S
Sbjct: 558 SELHNLGAEEKGNRLSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGAY 617
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
NRE+++RD +RFHHFR G+CSC YW
Sbjct: 618 NREVVIRDRTRFHHFREGQCSCNGYW 643
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 116/227 (51%), Gaps = 6/227 (2%)
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
Y MR G P+ ++ V+ SC +++L G QIHA +++ G D ++++L+ +YS
Sbjct: 156 YREMRRRGVPPNPLSSSFVMKSCIRISSLMGGLQIHARILRDGHQSDNLLLTTLMDLYSC 215
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE--FEANDVTFV 177
C +++ K F E D V W+ +I+ + + +A+ +F+ M+ FE +DVT +
Sbjct: 216 CDKFEEACKVFDEIPQWDTVSWNVLISCCIHNRRTRDALRMFDIMQSTADGFEPDDVTCL 275
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
LL AC++ G E G + ++++ L ++ + RCG L++A ++ + M
Sbjct: 276 LLLQACANLGALEFGERVHN-YIEEHGYDGALNLCNSLITMYSRCGRLEKAYSIFKRMDE 334
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLS 282
+ N + W ++S H A E++ LGV+P D +LS
Sbjct: 335 R-NVVSWSAMISGFAMHGYGREAIEAFEQMQQLGVSPDDQTLTGVLS 380
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 163/443 (36%), Positives = 259/443 (58%), Gaps = 15/443 (3%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
+L++++ ++L Y+K G + ++ +M R+V+AW +I G QNG ++ +D +
Sbjct: 256 DLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRS 315
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M G P+ T +V+S C+ LA L G+QIH +++ V +++I+MY+R G
Sbjct: 316 MITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGS 375
Query: 123 LDDSVKTFLE-CEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+ + F + C + + W+SMI A HG+GEEA+ LFE+M + E + +T+V +L
Sbjct: 376 FPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLS 435
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
ACSH G +G ++D + +++ P + HY C+VDLL R G EA IR MPV+ +A
Sbjct: 436 ACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDA 495
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
I W +LLSAC+ HK+ ++A AE++L ++P ++ Y ++N++++ RW + +A
Sbjct: 496 IAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKAR 555
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
+E+ V+KE G SW I++++H F D HP+ + + E+K G+VPD + +
Sbjct: 556 KEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVL 615
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFA----EHTRGLIVM----------LPFKYISEIKNRE 407
HD+D E KE L HSEKLAIAF L VM K IS++ +RE
Sbjct: 616 HDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCNDCHAAIKAISKVTDRE 675
Query: 408 IIVRDASRFHHFRNGKCSCGDYW 430
IIVRDA+RFHHFR+G CSC DYW
Sbjct: 676 IIVRDATRFHHFRDGLCSCKDYW 698
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 119/258 (46%), Gaps = 13/258 (5%)
Query: 15 MYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKIT 74
M+ KSG L + V MP R+ ++W ++ G + G + + M GF P + T
Sbjct: 1 MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
+V+SSC+ G+++H+ VVK G V V +S+++MY +CG + + F
Sbjct: 61 LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMP 120
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGME 194
V W++M++ G+ + A +LFE M + V++ +++ + GL K ++
Sbjct: 121 VRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSI----VSWNAMIAGYNQNGLDAKALK 176
Query: 195 FFDLMVKKYRRKPRLEHYTCVVDLLGRCGYL------DEAAALIRNMPVKANAIIWKTLL 248
F M+ + P + +T + +L C L + A I + N+ + L+
Sbjct: 177 LFSRMLHESSMAP--DEFT-ITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALI 233
Query: 249 SACKTHKSTDMAGRIAEE 266
S S + A RI ++
Sbjct: 234 STYAKSGSVENARRIMDQ 251
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 135/338 (39%), Gaps = 69/338 (20%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNV------------------------------- 37
+S+ +MY K G V MP+R+V
Sbjct: 96 ANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSI 155
Query: 38 IAWITLIAGKAQNGLAEDVLDQYN-LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHA 96
++W +IAG QNGL L ++ ++ PD+ T SV+S+C+ L + G+Q+HA
Sbjct: 156 VSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHA 215
Query: 97 EVVKAGASLDVGVISSLISMYSRCGC-------LDDSVKTFLEC---------------- 133
+++ + + V ++LIS Y++ G +D S++T L
Sbjct: 216 YILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDM 275
Query: 134 ----------EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
DVV W++MI Y +G+ +EAI+LF M E N T ++L C
Sbjct: 276 ESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVC 335
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
+ + G + ++ + ++ + R G A + + + I
Sbjct: 336 ASLACLDYGKQIHCRAIRSLLEQSS-SVSNAIITMYARSGSFPWARRMFDQVCWRKETIT 394
Query: 244 WKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYV 279
W +++ A H + A + EE+L GV P D YV
Sbjct: 395 WTSMIVALAQHGQGEEAVGLFEEMLRAGVEP-DRITYV 431
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 167/432 (38%), Positives = 258/432 (59%), Gaps = 24/432 (5%)
Query: 18 KSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVS 77
K G + E ++ M +N I+W +I G + G ++ L+ +N+M+ RP K S
Sbjct: 239 KCGMIEEARELFNEMKEKNEISWSAMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSS 298
Query: 78 VISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSD 137
V+++C+ L L QG+ IHA V S D + ++L+ MY++CG LD + F + E +
Sbjct: 299 VLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKE 358
Query: 138 VVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFD 197
V W++MI G HG+ E+AI LF +M++++F N +T + +L AC+H G+ ++G+ F+
Sbjct: 359 VFTWNAMICGLGMHGRAEDAIELFFKMQKQKFRPNGITLLGVLSACAHSGMVDEGLRIFN 418
Query: 198 LMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKST 257
M + Y +P +EHY CVVDLLGR G L EA ++ +MP++ +A +W LL AC+ H
Sbjct: 419 SMEEVYGIEPGMEHYGCVVDLLGRAGLLGEAEEVMYSMPMEPSAAVWGALLGACRKHGDV 478
Query: 258 DMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEI 317
++ R+ + +L + PQ++ Y LLSNI+A A RW V+ R+ M+ER VK G+S ++
Sbjct: 479 ELGERVGKILLELEPQNSGRYALLSNIYARAGRWDDVANVRKLMKERGVKTSTGISMIDF 538
Query: 318 KNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHS 377
VH+F MGD SHP+ I L L+ + +K+ G+ P+T + D++ EEKE L++HS
Sbjct: 539 DGVVHEFKMGDGSHPQMKNIYLMLKNMIKRLKMEGFSPNTSQVLFDIEEEEKEAELQYHS 598
Query: 378 EKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREIIVRDASRFHH 418
EKLAIAF GLI P FK IS++ +REIIVRD +R+HH
Sbjct: 599 EKLAIAF-----GLINTKPGTTIHVVKNLRMCEDCHSAFKLISQVYDREIIVRDRARYHH 653
Query: 419 FRNGKCSCGDYW 430
F+ G CSC D+W
Sbjct: 654 FKTGTCSCKDFW 665
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 129/285 (45%), Gaps = 15/285 (5%)
Query: 27 KVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELA 86
KV +P NV + +I G QN + Y M + RP+K T+ ++ +C+
Sbjct: 85 KVFEYVPNPNVFVFNIIIKGCLQNNEPCKAICCYYKMMIAHARPNKFTYPTLFKACTAAE 144
Query: 87 TLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIA 146
+G Q+HA V+K G S DV + S+ I MY G ++ + + E SDV+ +++MI
Sbjct: 145 AAEEGVQVHAHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMID 204
Query: 147 AYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRK 206
Y G+ E A LF ME K + +V ++ + CG+ E+ E F+ M +K
Sbjct: 205 GYLKCGEVEAAKELFWSMEDKNVGSWNV----MVSGMAKCGMIEEARELFNEMKEKNEIS 260
Query: 207 PRLEHYTCVVDLLGRCGYLDEAAALIRNMP---VKANAIIWKTLLSACKTHKSTDMAGRI 263
++ ++D + GY EA + M ++ + ++L+AC + D GR
Sbjct: 261 -----WSAMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQ-GRW 314
Query: 264 AEEILGVNPQ--DAAPYVLLSNIHASAKRWQGVSEFREAMRERNV 306
+ N DA L +++A R + E M ++ V
Sbjct: 315 IHAYVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEV 359
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 72/155 (46%), Gaps = 4/155 (2%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
D V G++L MY K G L V M + V W +I G +G AED ++ + M
Sbjct: 326 FDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKM 385
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSRCGC 122
+ FRP+ IT + V+S+C+ + +G +I + + G + ++ + R G
Sbjct: 386 QKQKFRPNGITLLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGL 445
Query: 123 LDDS--VKTFLECEYSDVVLWSSMIAAYGFHGKGE 155
L ++ V + E S V W +++ A HG E
Sbjct: 446 LGEAEEVMYSMPMEPSAAV-WGALLGACRKHGDVE 479
>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 170/443 (38%), Positives = 259/443 (58%), Gaps = 17/443 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+++ +SL Y K G++ ++ +P+++++AW ++ G AQN + L+ + M+
Sbjct: 205 DVISWTSLIVAYAKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQ 264
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIH--AEVVKAGASLDVGVISSLISMYSRCGC 122
G + D++T V VIS+C++L + AE G + +V V S+LI MY++CG
Sbjct: 265 AAGVKTDEVTLVGVISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGS 324
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
++D+ K F E +V +SSMI + HG A+ LF++M + E + N VTF+ +L A
Sbjct: 325 VEDAYKVFERMEERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTA 384
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
CSH G+ E+G + F +M + + P +HY C+VDLLGR G L+EA L++ MP+ +
Sbjct: 385 CSHAGMVEQGQQLFAMMEECHGVAPSEDHYACMVDLLGRAGRLEEALNLVKMMPMNPHGG 444
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMR 302
+W LL AC+ H + DMA A + + P Y+LLSNI+ASA RW VS+ R+ MR
Sbjct: 445 VWGALLGACRIHGNPDMAQIAASHLFELEPNGIGNYILLSNIYASAGRWDDVSKVRKLMR 504
Query: 303 ERNVKKEPGVSWLEIKNQ-VHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
+ +KK PG SW+E K +H+F GD SHP+S EI LE+L +K GY P+ +
Sbjct: 505 AKGLKKNPGCSWVEGKKGIIHEFFAGDMSHPKSREIKQALEDLLDRLKYLGYQPNLSSVA 564
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFAEHTR--GLIVMLPFKY------------ISEIKNRE 407
+D+ EEK+ L HSEKLA+AF T G + + S+I RE
Sbjct: 565 YDISDEEKKRLLMSHSEKLALAFGLLTTNAGCTIRIVKNLRICEDCHSVMCGASQITGRE 624
Query: 408 IIVRDASRFHHFRNGKCSCGDYW 430
I+VRD RFHHFR+G+CSCG++W
Sbjct: 625 IVVRDNMRFHHFRDGRCSCGNFW 647
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 115/266 (43%), Gaps = 34/266 (12%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
N W LI G A G + + YN MR G P TF +++ +CS + G+Q+H
Sbjct: 103 NPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDVNLGRQVH 162
Query: 96 AEVVKAGA-SLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKG 154
+ + G D+ V ++LI MY +CGCL + F E DV+ W+S+I AY G
Sbjct: 163 TQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVGNM 222
Query: 155 E-------------------------------EAINLFEQMEQKEFEANDVTFVSLLYAC 183
E EA+ +FE+M+ + ++VT V ++ AC
Sbjct: 223 EAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGVISAC 282
Query: 184 SHCGLKEKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
+ G + D+ + + + + ++D+ +CG +++A + M + N
Sbjct: 283 AQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEER-NVY 341
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEIL 268
+ +++ H A + +E+L
Sbjct: 342 SYSSMIVGFAMHGLAGAAMELFDEML 367
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 97/237 (40%), Gaps = 9/237 (3%)
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK--TFLE 132
VSV+ C+ + Q +Q+HA + + G V++ L+ ++ D F +
Sbjct: 42 LVSVLHGCTHI---NQVKQVHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMDPYPRLVFQQ 98
Query: 133 CEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKG 192
EY + LW+++I Y G E++ L+ M ++ TF +LL ACS G
Sbjct: 99 VEYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDVNLG 158
Query: 193 MEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACK 252
+ + L ++D+ +CG L + M + + I W +L+ A
Sbjct: 159 RQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEM-LDRDVISWTSLIVAYA 217
Query: 253 THKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKE 309
+ + A + + G+ +D + + +A R + E E M+ VK +
Sbjct: 218 KVGNMEAASELFD---GLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTD 271
>gi|356557795|ref|XP_003547196.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Glycine max]
Length = 661
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 169/444 (38%), Positives = 259/444 (58%), Gaps = 22/444 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE + +SL H+Y G V LM R+++A I++I G A NG + L +
Sbjct: 160 GFESLVFVQNSLLHIYAACGDTESAHNVFELMRDRDLVAXISVINGFALNGRPSEALTLF 219
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G PD T VS++S+ +EL L G+++H ++K G + V +SL+ +Y++C
Sbjct: 220 REMSAEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLRENSHVTNSLLDLYAKC 279
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
+ + + + V W+S+I +G GEEA+ LF +ME + +++TFV +L
Sbjct: 280 DAIWEXER--------NAVSWTSLIVGLAVNGFGEEALELFREMEGQGLVPSEITFVGVL 331
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
YACSHCG+ ++G ++F M +++ PR+EHY C+VDLL R G + +A I+NMPV+ N
Sbjct: 332 YACSHCGMLDEGFDYFRRMKEEFGIMPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPN 391
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A+ W+TLL AC H + +L + P+ + YVLLSN++ S RW V R +
Sbjct: 392 AVTWRTLLGACTIHGHLGLGETARSHLLKLEPKHSGDYVLLSNLYTSECRWADVQLIRRS 451
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M + VKK G S +E+ N+V++FTMG++SHP+S ++ LE++T +KL GYVP T
Sbjct: 452 MLKDGVKKTSGYSLVELGNRVYEFTMGNRSHPQSQDVYALLEKITELLKLEGYVPHTANV 511
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRG----LIVM----------LPFKYISEIKNR 406
+ D++ EEKE L +HSEK AIAF + VM + K ++++ +R
Sbjct: 512 LADIEEEEKEQALSYHSEKXAIAFMRLNTAPGTTIRVMKNLRVCADCHMAIKLMAKVYDR 571
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EI++RD RFHHFR G CSC DYW
Sbjct: 572 EIVIRDRGRFHHFRGGSCSCKDYW 595
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 99/214 (46%), Gaps = 12/214 (5%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
NV W T+ G A++ L Y M + PD T+ ++ + S+ + +G+ IH
Sbjct: 94 NVFTWNTMTRGYAESDNPSPALRFYRQMIVSRIEPDTHTYPFLLKAISKSLNVREGEAIH 153
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGE 155
+ ++ G V V +SL+ +Y+ CG + + F D+V S+I + +G+
Sbjct: 154 SVTIRNGFESLVFVQNSLLHIYAACGDTESAHNVFELMRDRDLVAXISVINGFALNGRPS 213
Query: 156 EAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYT-C 214
EA+ LF +M + E + T VSLL A + G E G ++K R+ H T
Sbjct: 214 EALTLFREMSAEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLREN--SHVTNS 271
Query: 215 VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
++DL +C + E + NA+ W +L+
Sbjct: 272 LLDLYAKCDAIWEX---------ERNAVSWTSLI 296
>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 660
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 166/410 (40%), Positives = 255/410 (62%), Gaps = 15/410 (3%)
Query: 35 RNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQI 94
++VI+W +IA N + ++ + Y+ M G PD ++ VSV+ + +L+ L G+++
Sbjct: 252 KSVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGDLSALSLGRRV 311
Query: 95 HAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKG 154
H + ++ + ++LI MY++CGCL D+ F + ++ DVV W+S+I+AYG G+G
Sbjct: 312 HKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSIISAYGKCGQG 371
Query: 155 EEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC 214
+A+ +F +M + + FVS+L ACSH GL + G +F+LM + P+LEH+ C
Sbjct: 372 RDAVAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLMAE-CGITPKLEHFAC 430
Query: 215 VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQD 274
VVDLLGR G +DEA IR MP++ + +W LLSAC+ + + ++ A+++L +NP+
Sbjct: 431 VVDLLGRAGKIDEAYGFIRQMPLEPDERVWGPLLSACRVYSNMNIGILAADKLLMLNPEH 490
Query: 275 AAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRS 334
+ YVLLSNI+A A RW V+ R M + +KK PG+S +E+ + VH F GD SHP+S
Sbjct: 491 SGYYVLLSNIYAKAGRWADVAAIRSIMERKGIKKLPGISNVELNDGVHTFLAGDHSHPQS 550
Query: 335 MEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFA--------- 385
+I L+ L +MK GY+P+T + +HD++ E+KEY+L HSEKLA+AFA
Sbjct: 551 KKIYEELDVLVGKMKELGYMPETDSALHDVEEEDKEYHLAVHSEKLAVAFAIINTKPGTP 610
Query: 386 -EHTRGLIVM----LPFKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
T+ L V + K IS+I REII+RD RFHHF+ G CSCGDYW
Sbjct: 611 IRVTKNLRVCGDCHVAAKLISKIAEREIIIRDTHRFHHFQEGCCSCGDYW 660
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 88/177 (49%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G L +Y G + + +NV+ + +I N L +D L Y M GF
Sbjct: 57 GIKLMRVYAACGEPGLARHIFDEITDKNVVFFNVMIRSYVNNHLYKDALLVYKTMYTQGF 116
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
PD T+ V+ + S +L G QIH V+K G L++ V + LI+MY +C L ++ +
Sbjct: 117 VPDMYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQ 176
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
E DVV W+SM++ Y +G+ +A+ L +ME + ND T SLL A ++
Sbjct: 177 VLDEIPCRDVVSWNSMVSVYAQNGRFNDALELCREMEALNLKPNDCTMASLLPAVTN 233
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 122/278 (43%), Gaps = 37/278 (13%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +L+L G+ L MY K SL E ++V+ +P R+V++W ++++ AQNG D L+
Sbjct: 150 GLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYAQNGRFNDALELC 209
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M + +P+ T S++ + + +S +Y +
Sbjct: 210 REMEALNLKPNDCTMASLLPAVTN-------------------------TTSDNVLYVK- 243
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
+ FL+ V+ W+ MIA Y + +EA+ L+ QME E + V+ VS+L
Sbjct: 244 -------EMFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVL 296
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
A G +K + P L ++D+ +CG L +A A+ M + +
Sbjct: 297 PAYGDLSALSLGRRVHKFAERK-KLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFR-D 354
Query: 241 AIIWKTLLSAC-KTHKSTDMAGRIAE-EILGVNPQDAA 276
+ W +++SA K + D AE G+NP A
Sbjct: 355 VVSWTSIISAYGKCGQGRDAVAVFAEMRNSGLNPDSIA 392
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 62/122 (50%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
+L+ ++L MY K G L + V M R+V++W ++I+ + G D + + MR
Sbjct: 323 NLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSIISAYGKCGQGRDAVAVFAEMR 382
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G PD I FVSV+++CS L G+ + + G + + + ++ + R G +D
Sbjct: 383 NSGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLMAECGITPKLEHFACVVDLLGRAGKID 442
Query: 125 DS 126
++
Sbjct: 443 EA 444
>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 701
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 170/435 (39%), Positives = 265/435 (60%), Gaps = 14/435 (3%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+S+ MY S+ K+ + +++V++W +LI+G + G A L+ + M +VG
Sbjct: 267 NSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAV 326
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
PD++T +SV+++C++++ L G + + VVK G ++V V ++LI MY+ CG L + +
Sbjct: 327 PDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCACRV 386
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F E ++ + M+ +G HG+G EAI++F +M K ++ F ++L ACSH GL
Sbjct: 387 FDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACSHSGLV 446
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
++G E F M + Y +PR HY+C+VDLLGR GYLDEA A+I NM +K N +W LLS
Sbjct: 447 DEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNEDVWTALLS 506
Query: 250 ACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKE 309
AC+ H++ +A A+++ +NP + YV LSNI+A+ +RW+ V R + +R ++K
Sbjct: 507 ACRLHRNVKLAVISAQKLFELNPDGVSGYVCLSNIYAAERRWEDVENVRALVAKRRLRKP 566
Query: 310 PGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEK 369
P S++E+ VHQF +GD SH +S +I L++L ++K GY PDT ++D++ E K
Sbjct: 567 PSYSFVELNKMVHQFFVGDTSHEQSDDIYAKLKDLNEQLKKAGYKPDTSLVLYDVEEEIK 626
Query: 370 EYNLKHHSEKLAIAFA----------EHTRGLIVM----LPFKYISEIKNREIIVRDASR 415
E L HSE+LA+AFA T+ L V K IS++ NREII+RD R
Sbjct: 627 EKMLWDHSERLALAFALINTGPGTTIRITKNLRVCGDCHTVIKMISKLTNREIIMRDICR 686
Query: 416 FHHFRNGKCSCGDYW 430
FHHFR+G CSCG YW
Sbjct: 687 FHHFRDGLCSCGGYW 701
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 148/315 (46%), Gaps = 7/315 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E D+ G+S+ MY K G + V M +R++ +W T+++G +NG A + +
Sbjct: 154 GLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVF 213
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVG---VISSLISMY 117
MR GF D+ T ++++S+C ++ L G++IH VV+ G S V +++S+I MY
Sbjct: 214 GDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLMNSIIDMY 273
Query: 118 SRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
C + + K F DVV W+S+I+ Y G +A+ LF +M ++VT +
Sbjct: 274 CNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAVPDEVTVI 333
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
S+L AC+ G +VK+ + T ++ + CG L A + MP
Sbjct: 334 SVLAACNQISALRLGATVQSYVVKR-GYVVNVVVGTALIGMYANCGSLVCACRVFDEMPE 392
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVS 295
K N +++ H A I E+L GV P + +LS S +G
Sbjct: 393 K-NLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACSHSGLVDEGKE 451
Query: 296 EFREAMRERNVKKEP 310
F + R+ +V+ P
Sbjct: 452 IFYKMTRDYSVEPRP 466
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 126/280 (45%), Gaps = 9/280 (3%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
+ LA Y G + + + + ++N W ++I G A N L Y M G
Sbjct: 61 ATKLAACYAVCGHMPYAQHIFDQIVLKNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQ 120
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
+PD T+ V+ +C +L G+++HA VV G DV V +S++SMY + G ++ +
Sbjct: 121 KPDNFTYPFVLKACGDLLLREMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAARV 180
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F D+ W++M++ + +G+ A +F M + F + T ++LL AC
Sbjct: 181 VFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMD 240
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHY--TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKT 246
+ G E +V+ + ++D+ C + A L + VK + + W +
Sbjct: 241 LKVGKEIHGYVVRNGESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVK-DVVSWNS 299
Query: 247 LLSACK----THKSTDMAGRIAEEILGVNPQDAAPYVLLS 282
L+S + ++ ++ GR+ ++G P + +L+
Sbjct: 300 LISGYEKCGDAFQALELFGRMV--VVGAVPDEVTVISVLA 337
>gi|115486938|ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|113648463|dbj|BAF28975.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|125578262|gb|EAZ19408.1| hypothetical protein OsJ_34963 [Oryza sativa Japonica Group]
Length = 645
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 173/450 (38%), Positives = 255/450 (56%), Gaps = 26/450 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + ++ +Y+K G + + +V M ++ +AW ++ G A NG + LD +
Sbjct: 202 GIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLF 261
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVI-SSLISMYSR 119
M+ G RPD +S+C+ L L G+Q +V LD V+ ++LI MY++
Sbjct: 262 LAMQAEGVRPDCYAVAGALSACTRLGALDLGRQA-IRMVDWDEFLDNPVLGTALIDMYAK 320
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG ++ F + D+++W++MI G G + A L QME+ + ND TF+ L
Sbjct: 321 CGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGL 380
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L +C+H GL + G +F M K Y PR+EHY C+VDLL R G L EA LI +MP+ A
Sbjct: 381 LCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPA 440
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
NA+I LL CK H++ ++A + +++ + P ++ YV+LSNI+++ RW+ ++ R
Sbjct: 441 NAVILGALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLSNIYSNRGRWEDAAKLRL 500
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M+E+ V+K P SW+E + +VH+F +GDKSHP S +I L+EL EMK GY P T
Sbjct: 501 DMKEKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEV 560
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYI 400
M D++ EEKE+ L HHSEKLAIAF L+V P K I
Sbjct: 561 VMFDVEDEEKEHTLVHHSEKLAIAF-----NLLVTGPGETIRVTKNLRVCSDCHTAIKLI 615
Query: 401 SEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
S I +REIIVRD +RFH FR+G CSC DYW
Sbjct: 616 SRITHREIIVRDNNRFHCFRDGSCSCNDYW 645
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 115/243 (47%), Gaps = 10/243 (4%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV--- 66
+SL +Y + G L ++V MP + ++W LI G D+ + ++ R
Sbjct: 110 TSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITAYMDAG---DLREAVHVARNAFAN 166
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
G RPD T V V+++C+ +A L G+ + + G + V V ++ + +Y +CG + +
Sbjct: 167 GMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKA 226
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHC 186
+ F + D V W +M+ Y +G EA++LF M+ + + L AC+
Sbjct: 227 REVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRL 286
Query: 187 GLKEKGMEFFDLM-VKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
G + G + ++ ++ P L T ++D+ +CG EA + + M K + I+W
Sbjct: 287 GALDLGRQAIRMVDWDEFLDNPVLG--TALIDMYAKCGSTAEAWVVFQQM-RKKDIIVWN 343
Query: 246 TLL 248
++
Sbjct: 344 AMI 346
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 93/206 (45%), Gaps = 5/206 (2%)
Query: 70 PDKITFVSVISSCSELA-TLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
P +TF + S S L L G+Q+HA +K + + V++SL+++Y+RCG L + +
Sbjct: 68 PSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQR 127
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F E + V W+++I AY G EA+++ + T V +L AC+
Sbjct: 128 VFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVAD 187
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
G + ++ + T VDL +CG + +A + M K +A+ W ++
Sbjct: 188 LATGETVWRAAEQEGIAQSVFV-ATAAVDLYVKCGEMAKAREVFDKMRDK-DAVAWGAMV 245
Query: 249 S--ACKTHKSTDMAGRIAEEILGVNP 272
A H + +A + GV P
Sbjct: 246 GGYASNGHPREALDLFLAMQAEGVRP 271
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 163/443 (36%), Positives = 259/443 (58%), Gaps = 15/443 (3%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
+L++++ ++L Y+K G + ++ +M R+V+AW +I G QNG ++ +D +
Sbjct: 362 DLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRS 421
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M G P+ T +V+S C+ LA L G+QIH +++ V +++I+MY+R G
Sbjct: 422 MITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGS 481
Query: 123 LDDSVKTFLE-CEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+ + F + C + + W+SMI A HG+GEEA+ LFE+M + E + +T+V +L
Sbjct: 482 FPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLS 541
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
ACSH G +G ++D + +++ P + HY C+VDLL R G EA IR MPV+ +A
Sbjct: 542 ACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDA 601
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
I W +LLSAC+ HK+ ++A AE++L ++P ++ Y ++N++++ RW + +A
Sbjct: 602 IAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKAR 661
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
+E+ V+KE G SW I++++H F D HP+ + + E+K G+VPD + +
Sbjct: 662 KEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVL 721
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFA----EHTRGLIVM----------LPFKYISEIKNRE 407
HD+D E KE L HSEKLAIAF L VM K IS++ +RE
Sbjct: 722 HDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCNDCHAAIKAISKVTDRE 781
Query: 408 IIVRDASRFHHFRNGKCSCGDYW 430
IIVRDA+RFHHFR+G CSC DYW
Sbjct: 782 IIVRDATRFHHFRDGLCSCKDYW 804
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 122/263 (46%), Gaps = 13/263 (4%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+SL M+ KSG L + V MP R+ ++W ++ G + G + + M GF
Sbjct: 102 NSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFT 161
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P + T +V+SSC+ G+++H+ VVK G V V +S+++MY +CG + +
Sbjct: 162 PTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTV 221
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F V W++M++ G+ + A +LFE M + V++ +++ + GL
Sbjct: 222 FERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSI----VSWNAMIAGYNQNGLD 277
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYL------DEAAALIRNMPVKANAII 243
K ++ F M+ + P + +T + +L C L + A I + N+ +
Sbjct: 278 AKALKLFSRMLHESSMAP--DEFT-ITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQV 334
Query: 244 WKTLLSACKTHKSTDMAGRIAEE 266
L+S S + A RI ++
Sbjct: 335 TNALISTYAKSGSVENARRIMDQ 357
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 82/218 (37%), Gaps = 51/218 (23%)
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAG-------------------------------- 102
+ ++ C A G G+ IHA VKAG
Sbjct: 29 YARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLF 88
Query: 103 -----ASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEA 157
A +V +SL+SM+++ G L D+ F E D V W+ M+ G+ EA
Sbjct: 89 DEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEA 148
Query: 158 INLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC--- 214
I M F T ++L +C+ G + +VK L +C
Sbjct: 149 IKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVK-------LGLGSCVPV 201
Query: 215 ---VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
V+++ G+CG + A + MPV++ + W ++S
Sbjct: 202 ANSVLNMYGKCGDSETATTVFERMPVRSVS-SWNAMVS 238
>gi|242090555|ref|XP_002441110.1| hypothetical protein SORBIDRAFT_09g020580 [Sorghum bicolor]
gi|241946395|gb|EES19540.1| hypothetical protein SORBIDRAFT_09g020580 [Sorghum bicolor]
Length = 516
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 174/439 (39%), Positives = 252/439 (57%), Gaps = 15/439 (3%)
Query: 7 VAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV 66
V ++L Y +G E + R MP R + AW LI+G + G + + MR
Sbjct: 78 VVWTALVSGYASNGCTGEAIDLFRSMPERGLFAWTALISGFVKAGNNTGAVGLFVEMRRD 137
Query: 67 GFR-PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD 125
G R D +V+ +ELA L G+Q+H + G + V ++L+ MYS+C +
Sbjct: 138 GVRIDDAFVLATVVGGAAELAALVLGRQLHGFAITLGFLSSMIVGNALVDMYSKCSDIHS 197
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
+ + F DVV W++++ HG+ EE + L+++M + N+VTFV L+YACSH
Sbjct: 198 AREVFGGIIVRDVVSWTTILVGEAQHGRVEEVLALYDRMLLAGMKPNEVTFVGLIYACSH 257
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
GL +KG + FD M ++Y KP L+HYTC +DLL R GYL EA LI MP + + W
Sbjct: 258 AGLVQKGRQLFDSMKREYGIKPGLQHYTCYLDLLSRSGYLSEAEELITTMPYEPDEASWG 317
Query: 246 TLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERN 305
LLSACK H T M R+A+ +L + P+D + Y+LLSN++A +W V++ R+ M E
Sbjct: 318 ALLSACKKHNDTQMCLRVADNLLELRPKDPSTYILLSNVYAVNCKWDSVAKVRKIMAEME 377
Query: 306 VKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMD 365
++KEPG SW+E + F G+ EI +LEEL SEM+ RGYVPDT + MHD++
Sbjct: 378 IRKEPGYSWIEAGRESRMFHAGEVPLDIGEEITRFLEELVSEMRKRGYVPDTSSVMHDLE 437
Query: 366 SEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNREIIVR 411
EKE +L HSE+LA+AF + G ++ + K+ISEI R+IIVR
Sbjct: 438 ENEKEQHLFLHSERLAVAFGILKSPPGSVIRVVKNLRVCGDCHTVMKFISEIAQRKIIVR 497
Query: 412 DASRFHHFRNGKCSCGDYW 430
DASRFHHF +G CSC ++W
Sbjct: 498 DASRFHHFEDGNCSCSEFW 516
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 96/185 (51%), Gaps = 3/185 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF ++ G++L MY K + +V + +R+V++W T++ G+AQ+G E+VL Y
Sbjct: 174 GFLSSMIVGNALVDMYSKCSDIHSAREVFGGIIVRDVVSWTTILVGEAQHGRVEEVLALY 233
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSR 119
+ M + G +P+++TFV +I +CS + +G+Q+ + + G + + + + SR
Sbjct: 234 DRMLLAGMKPNEVTFVGLIYACSHAGLVQKGRQLFDSMKREYGIKPGLQHYTCYLDLLSR 293
Query: 120 CGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQ-MEQKEFEANDVTFV 177
G L ++ + Y D W ++++A H + + + + +E + + + +
Sbjct: 294 SGYLSEAEELITTMPYEPDEASWGALLSACKKHNDTQMCLRVADNLLELRPKDPSTYILL 353
Query: 178 SLLYA 182
S +YA
Sbjct: 354 SNVYA 358
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 68 FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV 127
RPD S+ S+ + L +L G+Q+HA V + S D V SSLI MY +CG +D+
Sbjct: 7 LRPDHFVLASLASAAARLRSLRLGRQLHAHFVASPYSADDVVKSSLIDMYCKCGVPEDAR 66
Query: 128 KTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCG 187
K F + V+W+++++ Y +G EAI+LF M ++ A + A ++ G
Sbjct: 67 KVFDSIGVKNGVVWTALVSGYASNGCTGEAIDLFRSMPERGLFAWTALISGFVKAGNNTG 126
Query: 188 LKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTL 247
L V+ R R++ + ++G E AAL+ + AI L
Sbjct: 127 A-------VGLFVEMRRDGVRIDDAFVLATVVGGAA---ELAALVLGRQLHGFAITLGFL 176
Query: 248 LSACKTHKSTDMAGRIAE 265
S + DM + ++
Sbjct: 177 SSMIVGNALVDMYSKCSD 194
>gi|297819260|ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
Length = 657
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 168/446 (37%), Positives = 266/446 (59%), Gaps = 16/446 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ + ++L MY + G + V MP+RNV++W +IA A+NG A + L +
Sbjct: 212 GYNSHVYIMTTLVDMYARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTF 271
Query: 61 NLM--RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
M P+ +T VSV+ +C+ LA L QG+ IH +++ G + VIS+L++MY
Sbjct: 272 REMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVISALVTMYG 331
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
RCG LD + F DVV W+S+I++YG HG G +AI +FE+M VTFVS
Sbjct: 332 RCGKLDVGQRVFDRMHDRDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVS 391
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+L ACSH GL E+G F+ M + + KP++EHY C+VDLLGR LDEAA ++++M +
Sbjct: 392 VLGACSHEGLVEEGKRLFESMWRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDMRTE 451
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
+W +LL +C+ H + ++A R + + + P++A YVLL++I+A A+ W V +
Sbjct: 452 PGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVK 511
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
+ + R ++K PG W+E++ +++ F D+ +P +I +L +L +MK +GY+P T
Sbjct: 512 KLLEHRGLQKLPGRCWMEVRRKMYSFVSMDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTK 571
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAFA----------EHTRGLIVM----LPFKYISEIK 404
++++++EEKE + HSEKLA+AF T+ L + L K+IS+
Sbjct: 572 GVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFM 631
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
+EI+VRD +RFH F+NG CSCGDYW
Sbjct: 632 EKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 148/318 (46%), Gaps = 12/318 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + D + L MY GS+ KV R + W L G E+VL Y
Sbjct: 107 GSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLY 166
Query: 61 NLMRMVGFRPDKITFVSVISSC--SELAT--LGQGQQIHAEVVKAGASLDVGVISSLISM 116
M +G D+ T+ V+ +C SE L +G++IHA + + G + V ++++L+ M
Sbjct: 167 WKMNRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDM 226
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM--EQKEFEANDV 174
Y+R GC+D + F +VV WS+MIA Y +GK EA+ F +M E K+ N V
Sbjct: 227 YARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSV 286
Query: 175 TFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRN 234
T VS+L AC+ E+G ++++ L + +V + GRCG LD +
Sbjct: 287 TMVSVLQACASLAALEQGRLIHGYILRR-GLDSILPVISALVTMYGRCGKLDVGQRVFDR 345
Query: 235 MPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRW--- 291
M + + + W +L+S+ H A +I EE+L N P +S + A +
Sbjct: 346 MHDR-DVVSWNSLISSYGVHGYGRKAIQIFEEMLA-NGASPTPVTFVSVLGACSHEGLVE 403
Query: 292 QGVSEFREAMRERNVKKE 309
+G F R+ +K +
Sbjct: 404 EGKRLFESMWRDHGIKPQ 421
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 101/212 (47%), Gaps = 7/212 (3%)
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P + T+ +I C ++L G ++H ++ G+ D + + LI MYS G +D + K
Sbjct: 75 PSQQTYELLILCCGHRSSLSDGLRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKV 134
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC--SHCG 187
F + + +W+++ A G GEE + L+ +M + E++ T+ +L AC S C
Sbjct: 135 FDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECT 194
Query: 188 LKE--KGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
KG E + ++ + T +VD+ R G +D A+ + MPV+ N + W
Sbjct: 195 ADHLTKGKEIHAHLTRR-GYNSHVYIMTTLVDMYARFGCVDYASYVFNGMPVR-NVVSWS 252
Query: 246 TLLSACKTHKSTDMAGRIAEEILGVNPQDAAP 277
+++ + A R E++ +D++P
Sbjct: 253 AMIACYAKNGKAFEALRTFREMM-TETKDSSP 283
>gi|356526561|ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 168/446 (37%), Positives = 265/446 (59%), Gaps = 16/446 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+E ++ ++L +Y K GS+ V MP +N ++W +IA A+N + L+ +
Sbjct: 213 GYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELF 272
Query: 61 NLMRMVGFR--PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
LM P+ +T V+++ +C+ LA L QG+ IH +++ + V+++LI+MY
Sbjct: 273 QLMMFEACNSVPNSVTMVNMLQACAGLAALEQGKLIHGYILRRQLDSILPVLNALITMYG 332
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
RCG + + F + DVV W+S+I+ YG HG G++AI +FE M + + ++F++
Sbjct: 333 RCGEVLMGQRVFDNMKKRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGVSPSYISFIT 392
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+L ACSH GL E+G F+ M+ KYR P +EHY C+VDLLGR L EA LI +M +
Sbjct: 393 VLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLGEAIKLIEDMHFE 452
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
+W +LL +C+ H + ++A R + + + P++A YVLL++I+A AK W
Sbjct: 453 PGPTVWGSLLGSCRIHCNVELAERASTVLFELEPRNAGNYVLLADIYAEAKLWSEAKSVM 512
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
+ + R ++K PG SW+E+K +V+ F D+ +P+ EI L +L++EMK +GYVP T
Sbjct: 513 KLLEARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQIEEIHALLVKLSNEMKAQGYVPQTN 572
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIK 404
++D+D EEKE + HSEKLA+AF +G + + K+IS+
Sbjct: 573 VVLYDLDEEEKERIVLGHSEKLAVAFGLINTAKGETIRIRKNLRLCEDCHAVTKFISKFA 632
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
NREI+VRD +RFHHFR+G CSCGDYW
Sbjct: 633 NREILVRDVNRFHHFRDGVCSCGDYW 658
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 139/283 (49%), Gaps = 16/283 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ D + L +MY + GS+ KV R + W L A G +++LD Y
Sbjct: 108 GFDQDPFLATKLINMYYELGSIDRALKVFDETRERTIYVWNALFRALAMVGHGKELLDLY 167
Query: 61 NLMRMVGFRPDKITFVSVISSC--SELAT--LGQGQQIHAEVVKAGASLDVGVISSLISM 116
M +G D+ T+ V+ +C SEL+ L +G++IHA +++ G ++ V+++L+ +
Sbjct: 168 IQMNWIGTPSDRFTYTYVLKACVVSELSVCPLRKGKEIHAHILRHGYEANIHVMTTLLDV 227
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEA----- 171
Y++ G + + F + V WS+MIA + + +A+ LF+ M FEA
Sbjct: 228 YAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLM---MFEACNSVP 284
Query: 172 NDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAAL 231
N VT V++L AC+ E+G ++++ + L ++ + GRCG + +
Sbjct: 285 NSVTMVNMLQACAGLAALEQGKLIHGYILRR-QLDSILPVLNALITMYGRCGEVLMGQRV 343
Query: 232 IRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNP 272
NM K + + W +L+S H A +I E ++ GV+P
Sbjct: 344 FDNMK-KRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGVSP 385
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 92/185 (49%), Gaps = 8/185 (4%)
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P + TF +I SC++ +L G +H +V +G D + + LI+MY G +D ++K
Sbjct: 76 PTQQTFEHLIYSCAQKNSLSYGLDVHRCLVDSGFDQDPFLATKLINMYYELGSIDRALKV 135
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC-----S 184
F E + +W+++ A G G+E ++L+ QM ++ T+ +L AC S
Sbjct: 136 FDETRERTIYVWNALFRALAMVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKACVVSELS 195
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
C L+ KG E + ++ + + T ++D+ + G + A ++ MP K N + W
Sbjct: 196 VCPLR-KGKE-IHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTK-NFVSW 252
Query: 245 KTLLS 249
+++
Sbjct: 253 SAMIA 257
>gi|414869441|tpg|DAA47998.1| TPA: hypothetical protein ZEAMMB73_181337 [Zea mays]
Length = 639
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 172/444 (38%), Positives = 260/444 (58%), Gaps = 16/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + D+ SSL Y+K G L G +V M R+++ W ++IAG AQ+G ++ +
Sbjct: 198 GLDSDVFVRSSLIDAYVKLGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELF 257
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ GF ++ T SV+ +C+ + L G+Q+HA V+K D+ + ++L+ MY +C
Sbjct: 258 MRMKDAGFSSNQGTLTSVLRACTGMVMLEAGRQVHAHVLKY--DRDLILHNALLDMYCKC 315
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L+D+ F DV+ WS+M++ +GK EA+ +F+ M+ + N VT V +L
Sbjct: 316 GSLEDADALFHRMPQRDVISWSTMVSGLAQNGKSVEALRVFDLMKSQGVAPNHVTMVGVL 375
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
+ACSH GL E G +F M + + +P EH+ C+VDLLGR G LDEA I M ++ +
Sbjct: 376 FACSHAGLVEDGWHYFRSMKRLFGIQPEREHHNCMVDLLGRAGKLDEAVEFIHGMSLEPD 435
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
++IW+TLL AC+ HK+ +A A EIL + P D VLLSN +A ++W + +A
Sbjct: 436 SVIWRTLLGACRMHKNASLAAYAAREILKLEPDDQGARVLLSNTYADLRQWTDAEKPWKA 495
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
MR+R ++KEPG SW+E++ +VH F GD SHP S I L L +K GYVP T
Sbjct: 496 MRDRGMRKEPGRSWIELEKRVHVFIAGDLSHPCSDTIIQELNRLIGRIKSLGYVPQTEFV 555
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAF----AEHTRGLIVMLPF----------KYISEIKNR 406
+ D+ +E+KE LK+HSEK+AI F A + + +M K +S+ + R
Sbjct: 556 LQDLPTEQKEDLLKYHSEKMAIVFGTMHAVDGKPIRIMKNLRICGDCHAFAKLVSKSEGR 615
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
I++RD RFHHF++G CSCGDYW
Sbjct: 616 VIVIRDPVRFHHFQDGACSCGDYW 639
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/246 (36%), Positives = 131/246 (53%), Gaps = 8/246 (3%)
Query: 6 LVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQ-NGLAEDVLDQYNLMR 64
L +SLA MY K G L + ++ MP+RNV+ W T++A A +G ++ L MR
Sbjct: 104 LFVSNSLASMYAKFGLLDDALRMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAMR 163
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G P+ TF SV+ +C+ T G +HA VKAG DV V SSLI Y + G LD
Sbjct: 164 RDGVAPNAYTFSSVLGACT---TPGMLTAVHASTVKAGLDSDVFVRSSLIDAYVKLGDLD 220
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ F E D+V+W+S+IA + G G AI LF +M+ F +N T S+L AC+
Sbjct: 221 GGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACT 280
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
+ E G + V KY R L + ++D+ +CG L++A AL MP + + I W
Sbjct: 281 GMVMLEAGRQVH-AHVLKYDRD--LILHNALLDMYCKCGSLEDADALFHRMPQR-DVISW 336
Query: 245 KTLLSA 250
T++S
Sbjct: 337 STMVSG 342
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 6/126 (4%)
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVG-----VISSLISMYSRCGCL 123
R D ++ ++ C T G+ IH V G G V +SL SMY++ G L
Sbjct: 61 RADPVSLTRLVKLCVRHGTADHGRLIHRHVEAHGPLPHDGAGGLFVSNSLASMYAKFGLL 120
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYG-FHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
DD+++ F +VV W++++AA G+ +EA+ M + N TF S+L A
Sbjct: 121 DDALRMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAMRRDGVAPNAYTFSSVLGA 180
Query: 183 CSHCGL 188
C+ G+
Sbjct: 181 CTTPGM 186
>gi|226530803|ref|NP_001148047.1| LOC100281656 [Zea mays]
gi|195615502|gb|ACG29581.1| selenium-binding protein-like [Zea mays]
Length = 597
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 173/443 (39%), Positives = 254/443 (57%), Gaps = 17/443 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D + +SL Y G K+ MP+R+ +AW LI A+N +D L + MR
Sbjct: 155 DALLATSLMRCYANRGDGDGARKLFDEMPVRDAVAWNVLITCYARNRRTKDALKLFEEMR 214
Query: 65 MVGFR--PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
PD +T + ++ +CS L L G+Q+ A + G ++ V +SLI+MY RCGC
Sbjct: 215 GKDSESEPDDVTCILLLQACSSLGALDFGEQVWAYAEEHGYGGELKVRNSLITMYLRCGC 274
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
+D + + F VV W++MI+ +G G +AI++FE+M + + ++ TF +L A
Sbjct: 275 VDKAYRVFSGTPQKSVVTWTAMISGLAANGFGNDAISVFEEMIRSDVAPDEQTFTGVLSA 334
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRN-MPVKANA 241
CSH GL ++G FFD+M +Y KP + HY C+VDL+GR G LDEA + N M V +A
Sbjct: 335 CSHSGLVDEGFRFFDMMRCEYGLKPNVRHYGCIVDLMGRAGLLDEAYEFVTNEMKVAPDA 394
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
IW+TLL AC+ H D+ R+ ++ + Q A YVLL N +A+ W VSE R+ M
Sbjct: 395 TIWRTLLGACRIHGHVDLGERVIGNLIELKAQQAGDYVLLLNTYAAVGEWSKVSEIRKLM 454
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
+E ++ PG + +E VH+F D +HPR +EI L E+ ++++ GYVP+ +++
Sbjct: 455 QEEGIQTTPGCTTVEHNGTVHEFIADDDAHPRKVEIYENLSEIYKQLRIAGYVPNVSSEL 514
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFA-----EH-----TRGLIVMLP----FKYISEIKNRE 407
HD+DSE KE L +HSEKLAIAFA +H + L V + K S I R
Sbjct: 515 HDLDSEGKESALTYHSEKLAIAFALLVTPQHRPIRLAKNLRVCVDCHNFTKMFSAIYRRI 574
Query: 408 IIVRDASRFHHFRNGKCSCGDYW 430
+IVRD +RFHHF+ GKCSC DYW
Sbjct: 575 VIVRDRTRFHHFQGGKCSCNDYW 597
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 105/218 (48%), Gaps = 12/218 (5%)
Query: 63 MRMVGFRPDKITFVSVISS-CSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
+R +G R + T ++ CS L +Q+HA VV G D + +SL+ Y+ G
Sbjct: 115 VRALGRRGNAFTLAILLKPRCS----LAHARQLHANVVAEGHLRDALLATSLMRCYANRG 170
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQK--EFEANDVTFVSL 179
D + K F E D V W+ +I Y + + ++A+ LFE+M K E E +DVT + L
Sbjct: 171 DGDGARKLFDEMPVRDAVAWNVLITCYARNRRTKDALKLFEEMRGKDSESEPDDVTCILL 230
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L ACS G + G + + +++ L+ ++ + RCG +D+A + P K+
Sbjct: 231 LQACSSLGALDFGEQVW-AYAEEHGYGGELKVRNSLITMYLRCGCVDKAYRVFSGTPQKS 289
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAP 277
+ W ++S + + A + EE++ D AP
Sbjct: 290 -VVTWTAMISGLAANGFGNDAISVFEEMIR---SDVAP 323
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 12/190 (6%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ +L +SL MY++ G + + +V P ++V+ W +I+G A NG D + +
Sbjct: 254 GYGGELKVRNSLITMYLRCGCVDKAYRVFSGTPQKSVVTWTAMISGLAANGFGNDAISVF 313
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEV-VKAGASLDVGVISSLISMYSR 119
M PD+ TF V+S+CS + +G + + + G +V ++ + R
Sbjct: 314 EEMIRSDVAPDEQTFTGVLSACSHSGLVDEGFRFFDMMRCEYGLKPNVRHYGCIVDLMGR 373
Query: 120 CGCLDDSVKTFLECEY---SDVVLWSSMIAAYGFHGK---GEEAI-NLFEQMEQKEFEAN 172
G LD++ + F+ E D +W +++ A HG GE I NL E Q +A
Sbjct: 374 AGLLDEAYE-FVTNEMKVAPDATIWRTLLGACRIHGHVDLGERVIGNLIELKAQ---QAG 429
Query: 173 DVTFVSLLYA 182
D + YA
Sbjct: 430 DYVLLLNTYA 439
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 164/429 (38%), Positives = 252/429 (58%), Gaps = 14/429 (3%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y K G L KV + ++I+ T++ +Q ED + + M G PD
Sbjct: 454 YWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVL 513
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
S++++C+ L+ QG+Q+HA ++K + DV ++L+ Y++CG ++D+ F
Sbjct: 514 SSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPE 573
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
+V WS+MI HG G+ A++LF +M + N +T S+L AC+H GL + ++
Sbjct: 574 RGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKY 633
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK 255
F+ M + + EHY C++D+LGR G L++A L+ NMP +ANA +W LL A + H+
Sbjct: 634 FESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNMPFQANAAVWGALLGASRVHR 693
Query: 256 STDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWL 315
++ AE++ + P+ + +VLL+N +ASA W +++ R+ M++ NVKKEP +SW+
Sbjct: 694 DPELGRMAAEKLFTLEPEKSGTHVLLANTYASAGMWDEMAKVRKLMKDSNVKKEPAMSWV 753
Query: 316 EIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKH 375
EIK++VH F +GDKSHP + +I L EL M GYVP+ D+HD+D EKE L H
Sbjct: 754 EIKDKVHTFIVGDKSHPMTRDIYGKLAELGDLMNKAGYVPNVEVDLHDVDRSEKELLLSH 813
Query: 376 HSEKLAIAFA--EHTRGLIVM------------LPFKYISEIKNREIIVRDASRFHHFRN 421
HSE+LA+AFA G + + FKYIS+I +REII+RD +RFHHF N
Sbjct: 814 HSERLAVAFALISTPSGAPIRVKKNLRICRDCHVAFKYISKIVSREIIIRDINRFHHFTN 873
Query: 422 GKCSCGDYW 430
G CSCGDYW
Sbjct: 874 GTCSCGDYW 882
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 131/277 (47%), Gaps = 10/277 (3%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
+ D L MY K G L + KV MP R++I W LI+G + +G +VL ++
Sbjct: 338 DFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHR 397
Query: 63 MRMVGFRPD--KITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
MR G D + T SV+ S + + +Q+HA K G D VI+ LI Y +C
Sbjct: 398 MRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKC 457
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G LD ++K F E D++ ++M+ A GE+AI LF QM +K E + SLL
Sbjct: 458 GQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLL 517
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+ E+G + ++K+ + + +V +CG +++A +P +
Sbjct: 518 NACTSLSAYEQGKQVHAHLIKR-QFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERG- 575
Query: 241 AIIWKTLLSACKTH----KSTDMAGRIAEEILGVNPQ 273
+ W ++ H ++ D+ R+ +E GV P
Sbjct: 576 IVSWSAMIGGLAQHGHGKRALDLFHRMLDE--GVAPN 610
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 110/219 (50%), Gaps = 6/219 (2%)
Query: 35 RNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQI 94
RN ++W T+I+ +N + D + + M G RP++ F V+++C+ L G+Q+
Sbjct: 168 RNAVSWNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQV 227
Query: 95 HAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKG 154
H VV+ G DV ++L+ MYS+ G ++ + F + +DVV W++ I+ HG
Sbjct: 228 HGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHD 287
Query: 155 EEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC 214
A+ L QM+ N T S+L AC+ G G + MVK + +
Sbjct: 288 HRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAV---ADFDEFVA 344
Query: 215 V--VDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSAC 251
V VD+ + G+LD+A + MP + + I+W L+S C
Sbjct: 345 VGLVDMYAKHGFLDDARKVFDFMP-RRDLILWNALISGC 382
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 93/182 (51%), Gaps = 2/182 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+E D+ ++L MY K G + V MP +V++W I+G +G L+
Sbjct: 235 GYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELL 294
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G P+ T SV+ +C+ G+QIH +VKA A D V L+ MY++
Sbjct: 295 LQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKH 354
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQK--EFEANDVTFVS 178
G LDD+ K F D++LW+++I+ G+ E ++LF +M ++ + + N T S
Sbjct: 355 GFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLAS 414
Query: 179 LL 180
+L
Sbjct: 415 VL 416
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 102/221 (46%), Gaps = 9/221 (4%)
Query: 38 IAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAE 97
++W +L+ + NG+ D L + MR G ++ V+ ++ G Q+HA
Sbjct: 69 VSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLKCAPDVRF---GAQVHAL 125
Query: 98 VVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLE----CEYSDVVLWSSMIAAYGFHGK 153
V DV V ++L+++Y G +D++ + F E + V W++MI+AY + +
Sbjct: 126 AVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQ 185
Query: 154 GEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYT 213
+AI +F +M N+ F ++ AC+ E G + +V+ K
Sbjct: 186 SGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFT-AN 244
Query: 214 CVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
+VD+ + G ++ AA + MP A+ + W +S C TH
Sbjct: 245 ALVDMYSKLGDIEMAATVFEKMPA-ADVVSWNAFISGCVTH 284
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 79/153 (51%), Gaps = 4/153 (2%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F D+ AG++L + Y K GS+ + + +P R +++W +I G AQ+G + LD ++
Sbjct: 541 FTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFH 600
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV--ISSLISMYSR 119
M G P+ IT SV+S+C+ A L + + E +K +D + +I + R
Sbjct: 601 RMLDEGVAPNHITLTSVLSACNH-AGLVDDAKKYFESMKETFGIDRTEEHYACMIDILGR 659
Query: 120 CGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFH 151
G L+D+++ + ++ +W +++ A H
Sbjct: 660 AGKLEDAMELVNNMPFQANAAVWGALLGASRVH 692
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 84/202 (41%), Gaps = 18/202 (8%)
Query: 74 TFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLEC 133
T S ++ +L G +H+ ++K+G L G + L+++YSRC + F E
Sbjct: 6 TIGSALARFGTSRSLFAGAHLHSHLLKSG--LLAGFSNHLLTLYSRCRLPSAARAVFDEI 63
Query: 134 EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGM 193
V WSS++ AY +G +A+ F M + N+ +L C +
Sbjct: 64 PDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVL----KCAPDVR-- 117
Query: 194 EFFDLMVKKYRRKPRLEHYTCVVDLL----GRCGYLDEAAALIR---NMPVKANAIIWKT 246
F V RL H V + L G G +DEA + + + NA+ W T
Sbjct: 118 --FGAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNT 175
Query: 247 LLSA-CKTHKSTDMAGRIAEEI 267
++SA K +S D G E +
Sbjct: 176 MISAYVKNDQSGDAIGVFREMV 197
>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 170/444 (38%), Positives = 268/444 (60%), Gaps = 15/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+E DL G++L MY K G +++ +V + +R+ + W +++A AQNG ++ +
Sbjct: 178 GWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLC 237
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G RP + T V+VISS +++A L G++IH + G + V ++LI MY++C
Sbjct: 238 REMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKC 297
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + ++ F VV W+++I Y HG A++LF++M +KE + +TFV +L
Sbjct: 298 GSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKM-RKEDRPDHITFVGVL 356
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACS L ++G ++LMV+ Y P ++HYTC++DLLG CG LDEA LIRNM VK +
Sbjct: 357 AACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPD 416
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+ +W LL++CK H + ++A E+++ + P D+ YV+L+N++A + +W+GV + R+
Sbjct: 417 SGVWGALLNSCKIHGNVELAELALEKLIELEPDDSGNYVILANMYAQSGKWEGVEKLRQV 476
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M ++ +KK SW+E+KN+V+ F GD SH S I L+ L M GY PDTG+
Sbjct: 477 MIDKRIKKNIACSWIEVKNKVYAFLAGDVSHSNSDAIYAELKRLEGLMHEAGYAPDTGSV 536
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAF-----AEHTRGLIVM---------LPFKYISEIKNR 406
HD++ +EK + HSE+LAIAF + TR LI + K+IS+I R
Sbjct: 537 FHDVEEDEKTSMVCSHSERLAIAFGLISTSPGTRLLITKNLRICEDCHVAIKFISKIMER 596
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EI VRD +R+H F++G CSCGD+W
Sbjct: 597 EITVRDVNRYHSFKHGMCSCGDHW 620
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 129/247 (52%), Gaps = 4/247 (1%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
+ L H+Y S SL+ + +P +N+ W LI G A NG ++ + Y+ M G
Sbjct: 85 ATKLVHLYAVSNSLLNARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGL 144
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
RPD T V+ +CS L+ +G+G+ IH V+K+G D+ V ++LI MY++CGC+ D+ +
Sbjct: 145 RPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGR 204
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F + D VLW+SM+AAY +G +E+I+L +M + T V+++ + +
Sbjct: 205 VFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVAC 264
Query: 189 KEKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTL 247
G E + ++ +++ T ++D+ +CG + A AL + K + W +
Sbjct: 265 LPYGREIHGFGWRHGFQSNDKVK--TALIDMYAKCGSVKVALALFERLREK-RVVSWNAI 321
Query: 248 LSACKTH 254
++ H
Sbjct: 322 ITGYAMH 328
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 106/221 (47%), Gaps = 7/221 (3%)
Query: 68 FRPDKIT---FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
F P T + S++ SC + L G+Q+HA+ G + + + + L+ +Y+ L
Sbjct: 40 FPPQPTTHYGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLL 99
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
++ F + ++ LW+ +I Y ++G + AI L+ +M ++ T +L ACS
Sbjct: 100 NARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACS 159
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
+G + ++K + L ++D+ +CG + +A + + V+ +A++W
Sbjct: 160 ALSAIGEGRSIHEYVIKSGWERD-LFVGAALIDMYAKCGCVMDAGRVFDKIVVR-DAVLW 217
Query: 245 KTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSN 283
++L+A + D + + E+ GV P +A ++S+
Sbjct: 218 NSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISS 258
>gi|224137994|ref|XP_002322703.1| predicted protein [Populus trichocarpa]
gi|222867333|gb|EEF04464.1| predicted protein [Populus trichocarpa]
Length = 627
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 173/444 (38%), Positives = 258/444 (58%), Gaps = 15/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+++D+ GSSL MY K G + E V MP RNV++W +I G Q G E+ + +
Sbjct: 185 GYDVDVFVGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGEHEEAMRLF 244
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ G + T SVI C L G+QIH K L V SSLIS+YS+C
Sbjct: 245 KEALLEGLDVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVGSSLISLYSKC 304
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ + + F E ++ +W++M+ A H +EA +LF +ME N +TF+ +L
Sbjct: 305 GLIEGAYRVFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKMENAGMRPNFITFLCVL 364
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
YACSH GL E+G ++F LM KKY +P +HY +VDLLGR G L EA ++I+ MP +
Sbjct: 365 YACSHAGLVEEGKKYFALM-KKYEIEPGTQHYASMVDLLGRAGKLQEALSVIKGMPTEPT 423
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+W ++ C+ H +TD+A A+++ + + +V+LSN +A+A R++ ++ R+
Sbjct: 424 ESVWGAFITGCRIHGNTDLAAFAADKVFELGAVSSGLHVMLSNAYAAAGRYEDAAKARKM 483
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
+R+R VKKE G+SW+E N+VH+F GD+ H R EI LE+L EM+ GYV DT
Sbjct: 484 LRDRGVKKETGLSWIEEGNRVHKFAAGDRFHVRMKEIYQKLEDLGEEMERAGYVADTSFV 543
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA----EHTRGLIVML----------PFKYISEIKNR 406
+ ++ SEEK +++HSE+LAIAF R + +M K+IS++ R
Sbjct: 544 LREVGSEEKNQTIRYHSERLAIAFGLISIPLGRPIRIMKNLRVCGDCHNAIKFISKLSGR 603
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
IIVRD +RFH F +GKCSC DYW
Sbjct: 604 VIIVRDNNRFHRFEDGKCSCADYW 627
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 122/253 (48%), Gaps = 10/253 (3%)
Query: 12 LAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVG--FR 69
L + Y K+ + +V ++ W ++I+ AQN E VL RM+G
Sbjct: 95 LINFYSKTQLPLLSSQVFEESERKSSTTWSSVISSFAQN--EEPVLAIQYFCRMIGENLC 152
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
PD F S +C+ L G+ +H V+K G +DV V SSL+ MY++CG + ++
Sbjct: 153 PDDHIFPSATKACAILGRCDVGKSVHCLVIKTGYDVDVFVGSSLVDMYAKCGDIKEARNV 212
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F E + +VV WS MI Y G+ EEA+ LF++ + + ND T S++ C L
Sbjct: 213 FDEMPHRNVVSWSGMIYGYTQLGEHEEAMRLFKEALLEGLDVNDFTLSSVIRVCGSATLL 272
Query: 190 EKGMEFFDLMVKKYRRKPRLEHY--TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTL 247
E G + L ++ L + + ++ L +CG ++ A + +P+K N +W +
Sbjct: 273 ELGKQIHGLC---FKTSYDLSGFVGSSLISLYSKCGLIEGAYRVFDEVPIK-NLGMWNAM 328
Query: 248 LSACKTHKSTDMA 260
L AC H T A
Sbjct: 329 LIACAQHAHTKEA 341
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 2/182 (1%)
Query: 87 TLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIA 146
+L +GQQIHA ++K+G + V LI+ YS+ S + F E E WSS+I+
Sbjct: 69 SLLKGQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQVFEESERKSSTTWSSVIS 128
Query: 147 AYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRK 206
++ + + AI F +M + +D F S AC+ G + G L++K
Sbjct: 129 SFAQNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVGKSVHCLVIKTGYDV 188
Query: 207 PRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEE 266
+ +VD+ +CG + EA + MP + N + W ++ + A R+ +E
Sbjct: 189 DVFVG-SSLVDMYAKCGDIKEARNVFDEMPHR-NVVSWSGMIYGYTQLGEHEEAMRLFKE 246
Query: 267 IL 268
L
Sbjct: 247 AL 248
>gi|414876354|tpg|DAA53485.1| TPA: hypothetical protein ZEAMMB73_494075 [Zea mays]
Length = 830
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 173/447 (38%), Positives = 264/447 (59%), Gaps = 18/447 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ L ++L Y K G + E+V MP RN+++W +I A+N D + +
Sbjct: 385 GYGLHTHVATTLIDCYAKLGIVSYAERVFTSMPDRNLVSWSAMIGCYAKNERPGDAIQIF 444
Query: 61 NLMRM--VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
M P+ IT VSV+ +C+ + LGQG+ +HA +++ G L V V+++L++MY
Sbjct: 445 QEMMASDADLVPNSITIVSVLHACAGVNALGQGKVLHAYILRRGFDLLVSVLNALMAMYM 504
Query: 119 RCGCLDDSVKTF-LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
+CGCL+ F +VV W+S+I+ YG HG G E++ +FE+M ++ N +TFV
Sbjct: 505 KCGCLETGRYIFNWIGRRRNVVSWNSLISGYGMHGFGRESLQVFEEMIEEGISPNIITFV 564
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
S+L ACSH GL E+G + F+ MV+ Y PR EHY C+VDLLGR G LDEA LI++M +
Sbjct: 565 SVLGACSHVGLVEQGKKLFESMVE-YNVTPRAEHYACMVDLLGRAGRLDEAVELIQSMRI 623
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEF 297
+ + +W +LL AC+ H + A + + P++A YVLL++I+A AK V
Sbjct: 624 QPSPQVWGSLLGACRIHGHVEYAEMACSHLFDLEPRNAGNYVLLADIYARAKLQNQVDVL 683
Query: 298 REAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDT 357
+E + E ++K PG SW+E+K +++ F D +P+ E+ + E ++MK GYVPDT
Sbjct: 684 KELLEEHALEKVPGCSWIEVKKKLYSFVSVDNKNPQVEELQALIGEFVTQMKNEGYVPDT 743
Query: 358 GADMHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVMLP------------FKYISEI 403
+ ++D++ EEKE L HSEKLA+AF + G + + K+IS+
Sbjct: 744 RSVLYDIEEEEKERILLGHSEKLAVAFGLIKTGSGEAIRITKNLRLCEDCHSVTKFISKF 803
Query: 404 KNREIIVRDASRFHHFRNGKCSCGDYW 430
+REI+VRD +RFHHFRNG CSC DYW
Sbjct: 804 TDREIVVRDVNRFHHFRNGVCSCRDYW 830
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 125/292 (42%), Gaps = 32/292 (10%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F D + L Y +L +V P++N+ W ++ A E+ L
Sbjct: 280 FRSDPFLSTRLIEAYAALSALPAARQVFDEAPVKNIFVWNAMLKALALADHGEEALTCLA 339
Query: 62 LMRMVGFRPDKITFVSVISSC-----SELATLGQGQQIHAEVVKAGASLDVGVISSLISM 116
M +G D ++ + +C S L + +++HA ++ G L V ++LI
Sbjct: 340 DMGRLGVPVDSYSYAHGLKACIAASASHLPASARVREMHAHAIRRGYGLHTHVATTLIDC 399
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM--EQKEFEANDV 174
Y++ G + + + F ++V WS+MI Y + + +AI +F++M + N +
Sbjct: 400 YAKLGIVSYAERVFTSMPDRNLVSWSAMIGCYAKNERPGDAIQIFQEMMASDADLVPNSI 459
Query: 175 TFVSLLYACS-----------HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCG 223
T VS+L+AC+ H + +G FDL+V ++ + +CG
Sbjct: 460 TIVSVLHACAGVNALGQGKVLHAYILRRG---FDLLVSV---------LNALMAMYMKCG 507
Query: 224 YLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQ 273
L+ + + + N + W +L+S H + ++ EE++ G++P
Sbjct: 508 CLETGRYIFNWIGRRRNVVSWNSLISGYGMHGFGRESLQVFEEMIEEGISPN 559
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 80/192 (41%), Gaps = 14/192 (7%)
Query: 106 DVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQME 165
D + + LI Y+ L + + F E ++ +W++M+ A GEEA+ M
Sbjct: 283 DPFLSTRLIEAYAALSALPAARQVFDEAPVKNIFVWNAMLKALALADHGEEALTCLADMG 342
Query: 166 QKEFEANDVTFVSLLYAC-----SHCGLKEKGMEFFDLMVKKYRRKPRLEHY--TCVVDL 218
+ + ++ L AC SH + E + RR L + T ++D
Sbjct: 343 RLGVPVDSYSYAHGLKACIAASASHLPASARVRE---MHAHAIRRGYGLHTHVATTLIDC 399
Query: 219 LGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAP- 277
+ G + A + +MP + N + W ++ ++ A +I +E++ + D P
Sbjct: 400 YAKLGIVSYAERVFTSMPDR-NLVSWSAMIGCYAKNERPGDAIQIFQEMMASD-ADLVPN 457
Query: 278 -YVLLSNIHASA 288
++S +HA A
Sbjct: 458 SITIVSVLHACA 469
>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 168/445 (37%), Positives = 257/445 (57%), Gaps = 15/445 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D V S++ Y + G + E K R + ++ + W T++ G AQNG ED L +
Sbjct: 251 GLMPDQVTISNILSAYFQCGYIDEACKTFREIKEKDKVCWTTMMVGCAQNGKEEDALLLF 310
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M + RPD T SV+SSC+ LA+L QGQ +H + V G D+ V S+L+ MYS+C
Sbjct: 311 REMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKC 370
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G D+ F +V+ W+SMI Y +GK EA+ L+E+M + + +++TFV +L
Sbjct: 371 GETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNITFVGVL 430
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC H GL E+G +F + K + P +HY+C+++LLGR GY+D+A LI++M + N
Sbjct: 431 SACMHAGLVERGQGYFYSISKIHGMNPTFDHYSCMINLLGRAGYMDKAVDLIKSMTFEPN 490
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+IW TLLS C+ + + A + ++P +A PY++LSNI+A+ RW+ V+ R
Sbjct: 491 CLIWSTLLSVCRINCDVNNGEMAARHLFELDPHNAGPYIMLSNIYAACGRWKDVAAVRSL 550
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+ +KK SW+EI NQVH+F D++H + +I L L +++ G+ PDT
Sbjct: 551 MKNNKIKKFAAYSWIEIDNQVHKFVAEDRTHSETEQIYEELNRLIKKLQESGFTPDTNLV 610
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAF----AEHTRGLIVMLP-----------FKYISEIKN 405
+HD+ EEK ++ +HSEKLA+AF H R I ++ K++S+I
Sbjct: 611 LHDVVEEEKFDSICYHSEKLALAFWLIKKPHGRTPIRIMKNIRVCGDCHVFMKFVSKIIR 670
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
R II+RD +RFHHF G+CSC D W
Sbjct: 671 RPIILRDINRFHHFIEGRCSCKDSW 695
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 134/291 (46%), Gaps = 39/291 (13%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ + +++ Y KSG++ + V M + + +++ T+IAG + NG + L+ + M+
Sbjct: 88 DVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQ 147
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
GF T VSV+ +CS+L + +G+QIH +V V V ++L +MY++CG LD
Sbjct: 148 EEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGALD 207
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ F +VV W+SMI+ Y +G+ E LF +M+ + VT ++L A
Sbjct: 208 QARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNILSA-- 265
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
+F +CGY+DEA R + K + + W
Sbjct: 266 ----------YF------------------------QCGYIDEACKTFREIKEK-DKVCW 290
Query: 245 KTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQG 293
T++ C + + A + E+L V P + ++S+ A QG
Sbjct: 291 TTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQG 341
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 109/239 (45%), Gaps = 37/239 (15%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L +MY K G+L + + M +NV++W ++I+G QNG E + M+ G
Sbjct: 194 NALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLM 253
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
PD++T IS+++S Y +CG +D++ KT
Sbjct: 254 PDQVT-----------------------------------ISNILSAYFQCGYIDEACKT 278
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F E + D V W++M+ +GK E+A+ LF +M + ++ T S++ +C+
Sbjct: 279 FREIKEKDKVCWTTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASL 338
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
+G V + L + +VD+ +CG +A + + M + N I W +++
Sbjct: 339 CQGQAVHGKAV-IFGVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTR-NVISWNSMI 395
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 107/242 (44%), Gaps = 41/242 (16%)
Query: 106 DVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAY----------------- 148
D + + L+ +Y++ G L D+ F + DV W++M++AY
Sbjct: 57 DTFLQNRLLHLYAKSGNLSDARDLFDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMS 116
Query: 149 ------------GFHGKG--EEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGME 194
GF G G +A+ F +M+++ FE+ D T VS+L+ACS ++G +
Sbjct: 117 VHDAVSYNTVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQ 176
Query: 195 FFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
+V + + + ++ +CG LD+A L M V N + W +++S +
Sbjct: 177 IHGRIVATSLGESVFV-WNALTNMYAKCGALDQARWLFDRM-VNKNVVSWNSMISGYLQN 234
Query: 255 KSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGV 312
+ ++ E+ G+ P V +SNI ++ + + E + RE +K++ V
Sbjct: 235 GQPETCTKLFCEMQSSGLMPDQ----VTISNILSAYFQCGYIDEACKTFRE--IKEKDKV 288
Query: 313 SW 314
W
Sbjct: 289 CW 290
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 167/440 (37%), Positives = 262/440 (59%), Gaps = 15/440 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ +SL MY K + ++ + + +++W +I G AQNG + +D + M+
Sbjct: 411 DVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQ 470
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+ +PD T VSVI + +EL+ L Q + IH V++ +V V ++L+ MY++CG +
Sbjct: 471 LQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVH 530
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ K F + V W++MI YG HG G+ A+ LFE+M+++ + N+VTF+ +L ACS
Sbjct: 531 TARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACS 590
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL E+G ++F M K Y +P ++HY +VDLLGR L+EA I+ MP++ ++
Sbjct: 591 HSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQKMPIEPAISVF 650
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
+L AC+ HK+ ++ + A I ++P D +VLL+NI+A+A W V+ R M ++
Sbjct: 651 GAMLGACRIHKNVELGEKAANRIFDLDPDDGGYHVLLANIYATASMWDKVARVRTTMEKK 710
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
++K PG S +E++N+VH F G SHP++ +I +LE L + +K GY+PDT + +HD+
Sbjct: 711 GIQKTPGWSVVELQNEVHTFYSGTTSHPQAKKIYAFLETLGNRIKAAGYMPDTNS-VHDV 769
Query: 365 DSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNREIIV 410
+ KE L HSEKLAIAF+ + G + L KYIS + REIIV
Sbjct: 770 EDVVKEQLLNSHSEKLAIAFSLLNTSPGTTIHLRKNLRVCGDCHNATKYISLVTKREIIV 829
Query: 411 RDASRFHHFRNGKCSCGDYW 430
RD RFHHF++G CSCGDYW
Sbjct: 830 RDMRRFHHFKDGTCSCGDYW 849
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 136/267 (50%), Gaps = 8/267 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF ++ A + + +MY K + E K+ MP R+++ W T+I+G AQNG + L+
Sbjct: 205 GFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELV 264
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G RPD IT VS++ + +++ +L G+ IH ++AG V V ++L+ MYS+C
Sbjct: 265 LRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKC 324
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + F VV W+SMI Y +G A+ +F++M ++ E +VT + L
Sbjct: 325 GSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGAL 384
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
+AC+ G E+G F ++ + + ++ + +C +D AA + N+ K
Sbjct: 385 HACADLGDVEQG-RFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHK-T 442
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEI 267
+ W ++ + GRI E I
Sbjct: 443 LVSWNAMILGYAQN------GRINEAI 463
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 126/254 (49%), Gaps = 2/254 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE + ++L MY K GS+ + M + V++W ++I G QNG ++ +
Sbjct: 306 GFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIF 365
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M +T + + +C++L + QG+ +H + + DV V++SLISMYS+C
Sbjct: 366 QKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKC 425
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
+D + + F ++ +V W++MI Y +G+ EAI+ F +M+ + + + T VS++
Sbjct: 426 KRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVI 485
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
A + + + L+++ K + T +VD+ +CG + A L +M + +
Sbjct: 486 PALAELSVLPQAKWIHGLVIRTCLDK-NVFVATALVDMYAKCGAVHTARKLF-DMMDERH 543
Query: 241 AIIWKTLLSACKTH 254
W ++ TH
Sbjct: 544 VTTWNAMIDGYGTH 557
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 125/245 (51%), Gaps = 14/245 (5%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVI--AWITLIAGKAQNGLAEDVLDQYNLMRMVG 67
+ L ++ K GSL E +V + PI + I + T++ G A+N +D + + MR G
Sbjct: 113 TKLVSLFCKFGSLHEAARVFQ--PIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYDG 170
Query: 68 FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV 127
RP F ++ C + A L +G++IH +++ G + +V ++ +++MY++C ++++
Sbjct: 171 VRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAY 230
Query: 128 KTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCG 187
K F D+V W+++I+ Y +G G+ A+ L +M+++ + +T VS+L A + G
Sbjct: 231 KMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVG 290
Query: 188 LKEKGMEFFDLMVKKYRRKPRLEHY----TCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
G + Y + E + T +VD+ +CG + A + M K +
Sbjct: 291 SLRIGRS-----IHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGK-TVVS 344
Query: 244 WKTLL 248
W +++
Sbjct: 345 WNSMI 349
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 63/141 (44%), Gaps = 4/141 (2%)
Query: 111 SSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFE 170
+ L+S++ + G L ++ + F E L+ +M+ Y + ++A++ F +M
Sbjct: 113 TKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVR 172
Query: 171 ANDVTFVSLLYACSHCGLKEKGMEFF-DLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAA 229
F LL C KG E L+V + + T VV++ +C ++EA
Sbjct: 173 PVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGF--ASNVFAMTGVVNMYAKCRLVEEAY 230
Query: 230 ALIRNMPVKANAIIWKTLLSA 250
+ MP + + + W T++S
Sbjct: 231 KMFDRMPER-DLVCWNTIISG 250
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 175/450 (38%), Positives = 258/450 (57%), Gaps = 26/450 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G ++ ++L Y K G++ V M +N+++W ++I G A NGL ++ LD +
Sbjct: 239 GMVRNVFVATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLF 298
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVI-SSLISMYSR 119
M G +PD V V+ SC+ L L G + ++ LD V+ ++LI MY++
Sbjct: 299 FKMLNEGLKPDCYAMVGVLCSCARLGALELGDWA-SNLINGNEFLDNSVLGTALIDMYAK 357
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG +D + + F D V+W++ I+ G ++A+ LF QME+ + + TFV L
Sbjct: 358 CGRMDRAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGL 417
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L AC+H GL E+G +F+ M + P +EHY C+VDLLGR G LDEA LI++MP++A
Sbjct: 418 LCACTHAGLVEEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEA 477
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
NAI+W LL C+ H+ T + + ++++ + P + YVLLSNI+A++ +W+ ++ R
Sbjct: 478 NAIVWGALLGGCRLHRDTQLVEVVLKKLIALEPWHSGNYVLLSNIYAASHKWEEAAKIRS 537
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M ER VKK PG SW+E+ VHQF +GD SHP S +I L EL ++K GYVP T
Sbjct: 538 IMSERGVKKIPGYSWIEVDGVVHQFLVGDTSHPLSEKIYAKLGELAKDLKAAGYVPTTDH 597
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYI 400
+ D++ EEKE+ + HSEKLA+AF GLI P K+I
Sbjct: 598 VLFDIEEEEKEHFIGCHSEKLAVAF-----GLISTAPNDKILVVKNLRVCGDCHEAIKHI 652
Query: 401 SEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
S I REIIVRD +RFH F +G CSC DYW
Sbjct: 653 SRIAGREIIVRDNNRFHCFTDGLCSCKDYW 682
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 119/259 (45%), Gaps = 20/259 (7%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E D SL ++Y K G + KV +P +N +W I+G G + +D +
Sbjct: 138 GCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMF 197
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ +G RPD + V V+S+C L G+ I + + G +V V ++L+ Y +C
Sbjct: 198 RRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKC 257
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ + F ++V WSSMI Y +G +EA++LF +M + + + V +L
Sbjct: 258 GNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVL 317
Query: 181 YACSHCGLKE---------KGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAAL 231
+C+ G E G EF D V T ++D+ +CG +D A +
Sbjct: 318 CSCARLGALELGDWASNLINGNEFLDNSVLG----------TALIDMYAKCGRMDRAWEV 367
Query: 232 IRNMPVKANAIIWKTLLSA 250
R M K + ++W +S
Sbjct: 368 FRGMR-KKDRVVWNAAISG 385
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 111/215 (51%), Gaps = 2/215 (0%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
N+ + T+I G N ++ ++ Y+ MR G PD TF V+ +C+ + G ++H
Sbjct: 72 NIFLFNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMH 131
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGE 155
+ VVKAG D V SLI++Y++CG +D++ K F + + W++ I+ Y GK
Sbjct: 132 SLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCR 191
Query: 156 EAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV 215
EAI++F ++ + + + V +L AC G G E+ D + + + T +
Sbjct: 192 EAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSG-EWIDEYITENGMVRNVFVATAL 250
Query: 216 VDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
VD G+CG ++ A ++ M ++ N + W +++
Sbjct: 251 VDFYGKCGNMERARSVFDGM-LEKNIVSWSSMIQG 284
>gi|414870414|tpg|DAA48971.1| TPA: selenium-binding protein-like protein [Zea mays]
Length = 611
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 173/443 (39%), Positives = 254/443 (57%), Gaps = 17/443 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D + +SL Y G K+ MP+R+ +AW LI A+N +D L + MR
Sbjct: 169 DALLATSLMRCYANRGDGDGARKLFDEMPVRDAVAWNVLITCYARNRRTKDALKLFEEMR 228
Query: 65 MVGFR--PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
PD +T + ++ +CS L L G+Q+ A + G ++ V +SLI+MY RCGC
Sbjct: 229 GKDSESEPDDVTCILLLQACSSLGALDFGEQVWAYAEEHGYGGELKVRNSLITMYLRCGC 288
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
+D + + F VV W++MI+ +G G +AI++FE+M + + ++ TF +L A
Sbjct: 289 VDKAYRVFSGTPQKSVVTWTAMISGLAANGFGNDAISVFEEMIRSDVAPDEQTFTGVLSA 348
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRN-MPVKANA 241
CSH GL ++G FFD+M +Y KP + HY C+VDL+GR G LDEA + N M V +A
Sbjct: 349 CSHSGLVDEGFRFFDMMRCEYGLKPNVRHYGCIVDLMGRAGLLDEAYEFVTNEMKVAPDA 408
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
IW+TLL AC+ H D+ R+ ++ + Q A YVLL N +A+ W VSE R+ M
Sbjct: 409 TIWRTLLGACRIHGHVDLGERVIGNLIELKAQQAGDYVLLLNTYAAVGEWSKVSEIRKLM 468
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
+E ++ PG + +E VH+F D +HPR +EI L E+ ++++ GYVP+ +++
Sbjct: 469 QEEGIQTTPGCTTVEHNGTVHEFIADDDAHPRKVEIYENLSEIYKQLRIAGYVPNVSSEL 528
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFA-----EH-----TRGLIVMLP----FKYISEIKNRE 407
HD+DSE KE L +HSEKLAIAFA +H + L V + K S I R
Sbjct: 529 HDLDSEGKESALTYHSEKLAIAFALLVTPQHRPIRLAKNLRVCVDCHNFTKMFSAIYRRI 588
Query: 408 IIVRDASRFHHFRNGKCSCGDYW 430
+IVRD +RFHHF+ GKCSC DYW
Sbjct: 589 VIVRDRTRFHHFQGGKCSCNDYW 611
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 105/218 (48%), Gaps = 12/218 (5%)
Query: 63 MRMVGFRPDKITFVSVISS-CSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
+R +G R + T ++ CS L +Q+HA VV G D + +SL+ Y+ G
Sbjct: 129 VRALGRRGNAFTLAILLKPRCS----LAHARQLHANVVAEGHLRDALLATSLMRCYANRG 184
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQK--EFEANDVTFVSL 179
D + K F E D V W+ +I Y + + ++A+ LFE+M K E E +DVT + L
Sbjct: 185 DGDGARKLFDEMPVRDAVAWNVLITCYARNRRTKDALKLFEEMRGKDSESEPDDVTCILL 244
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L ACS G + G + + +++ L+ ++ + RCG +D+A + P K+
Sbjct: 245 LQACSSLGALDFGEQVW-AYAEEHGYGGELKVRNSLITMYLRCGCVDKAYRVFSGTPQKS 303
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAP 277
+ W ++S + + A + EE++ D AP
Sbjct: 304 -VVTWTAMISGLAANGFGNDAISVFEEMIR---SDVAP 337
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 12/190 (6%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ +L +SL MY++ G + + +V P ++V+ W +I+G A NG D + +
Sbjct: 268 GYGGELKVRNSLITMYLRCGCVDKAYRVFSGTPQKSVVTWTAMISGLAANGFGNDAISVF 327
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEV-VKAGASLDVGVISSLISMYSR 119
M PD+ TF V+S+CS + +G + + + G +V ++ + R
Sbjct: 328 EEMIRSDVAPDEQTFTGVLSACSHSGLVDEGFRFFDMMRCEYGLKPNVRHYGCIVDLMGR 387
Query: 120 CGCLDDSVKTFLECEY---SDVVLWSSMIAAYGFHGK---GEEAI-NLFEQMEQKEFEAN 172
G LD++ + F+ E D +W +++ A HG GE I NL E Q +A
Sbjct: 388 AGLLDEAYE-FVTNEMKVAPDATIWRTLLGACRIHGHVDLGERVIGNLIELKAQ---QAG 443
Query: 173 DVTFVSLLYA 182
D + YA
Sbjct: 444 DYVLLLNTYA 453
>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
Length = 787
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 170/449 (37%), Positives = 262/449 (58%), Gaps = 25/449 (5%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
+ D + ++L +Y + + + M + + +W +I+G AQNGL E + +
Sbjct: 344 LDADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQ 403
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
LM+ + +P+ IT S +S+C+ L L G+ +H + K L+V V+++LI MY++CG
Sbjct: 404 LMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCG 463
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+ ++ F + +VV W++MI+ YG HG+G EA+ L++ M TF+S++Y
Sbjct: 464 SIAEARSIFDRMDNKNVVSWNAMISGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIY 523
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA-N 240
ACSH GL ++G + F +M +YR P +EH TC+VDLLGR G L+EA LI P A
Sbjct: 524 ACSHGGLVDEGQKVFRVMTNEYRITPGIEHCTCMVDLLGRAGKLNEALELISEFPQSAIG 583
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+W LL AC HK++D+A ++++ ++ ++A YVLLSN++ S K + + R+
Sbjct: 584 PGVWGALLGACMVHKNSDLAKLASQKLFELDSENAGYYVLLSNLYTSKKHYSEAAVVRQE 643
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
+ R + K PG + +EI ++ H F GD HP+S I YLE LT++M GY P T A
Sbjct: 644 AKTRKLVKTPGCTLIEIGDRPHVFMAGDHLHPQSEAIYSYLERLTAKMIEAGYQPVTEAA 703
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
++D++ EEKE+ +K HSEKLAIAF GL+ P K+IS
Sbjct: 704 LYDVEEEEKEHMVKVHSEKLAIAF-----GLLSTEPGTEIRIIKNLRVCLDCHNATKFIS 758
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
++ R I+VRDASRFHHFR+G CSCGDYW
Sbjct: 759 KVTQRLIVVRDASRFHHFRDGVCSCGDYW 787
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 128/259 (49%), Gaps = 2/259 (0%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+ L +Y K G + + + M +++A+ LI+G + NG+ E ++ + + G+R
Sbjct: 251 TGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASGWR 310
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P+ T V+VI S + +HA VVKA D V ++L ++Y R ++ +
Sbjct: 311 PNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSI 370
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F + W++MI+ Y +G E A+ LF+ M++ + N +T S L AC+H G
Sbjct: 371 FDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGAL 430
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
G ++ ++ K + + + T ++D+ +CG + EA ++ M K N + W ++S
Sbjct: 431 SLG-KWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNK-NVVSWNAMIS 488
Query: 250 ACKTHKSTDMAGRIAEEIL 268
H A ++ +++L
Sbjct: 489 GYGLHGQGAEALKLYKDML 507
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 150/355 (42%), Gaps = 56/355 (15%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ D S+LA +Y K + KV +P + I W TL+AG + E +
Sbjct: 144 GYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLAGLPGSEALEAFVRMV 203
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ R+ RPD T S + + +E + + G+ +H VK G + V++ L+S+YS+C
Sbjct: 204 DAGRV---RPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKC 260
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS-- 178
G +D + F + D+V ++++I+ Y +G E ++ LF+++ + N T V+
Sbjct: 261 GDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVI 320
Query: 179 ---------LLYACSH----------------------CGLK--EKGMEFFDLMVKKYRR 205
LL C H C L E FD M++K
Sbjct: 321 PVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLEK--- 377
Query: 206 KPRLEHYTCVVDLLGRCGYLDEAAALIRNMP---VKANAIIWKTLLSACKTHKSTDMAGR 262
+E + ++ + G + A AL + M V+ N I + LSAC H G+
Sbjct: 378 --TMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSAC-AHLGALSLGK 434
Query: 263 IAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR---EAMRERNVKKEPGVSW 314
I+ + YV+ + I AK ++E R + M +NV VSW
Sbjct: 435 WVHRIISKEKLELNVYVMTALIDMYAK-CGSIAEARSIFDRMDNKNV-----VSW 483
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 67/162 (41%), Gaps = 18/162 (11%)
Query: 91 GQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGF 150
+ +H V AG + D V S+L +Y + DD+ K F D +LW++++A
Sbjct: 133 ARTLHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLAGL-- 190
Query: 151 HGKGEEAINLFEQM-EQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRL 209
G EA+ F +M + + T S L A + G V Y K L
Sbjct: 191 --PGSEALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGR-----CVHGYGVKCGL 243
Query: 210 -EH---YTCVVDLLGRCGYLDEAAALIRNMP----VKANAII 243
EH T ++ L +CG +D A L M V NA+I
Sbjct: 244 AEHEHVVTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALI 285
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 176/445 (39%), Positives = 267/445 (60%), Gaps = 15/445 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE L G++L Y K G + KV M +V +W +LIA AQNGL+ + +
Sbjct: 228 GFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLF 287
Query: 61 NLMRMVG-FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ M G R + +T +V+ +C+ L G+ IH +VVK ++ V +S++ MY +
Sbjct: 288 SDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCK 347
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG ++ + K F + +V W+ M+A YG HG G+EA+ +F +M + + N +TFVS+
Sbjct: 348 CGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSV 407
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L ACSH GL ++G +F+ M ++ +P +EHY+C+VDLLGR GYL EA LI+ M VK
Sbjct: 408 LAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKP 467
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
+ I+W +LL AC+ HK+ ++ A ++ ++P + YVLLSNI+A A RW V R
Sbjct: 468 DFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLSNIYADAGRWDDVERMRI 527
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M+ + K PG S +E K +VH F +GDK HP+ +I YL+EL +++ GY+P+ +
Sbjct: 528 LMKNHGLLKTPGYSIVEHKGRVHVFLVGDKEHPQHEKIYEYLDELNVKLQEVGYMPNVTS 587
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKN 405
++D+D EEK L+ HSEKLA+AF G ++ + K IS+I N
Sbjct: 588 VLYDVDVEEKGMVLRVHSEKLAVAFGIMNSVPGSVIQIIKNLRICGDCHFAIKLISKIVN 647
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
REI++RD+ RFHHF++G CSCGDYW
Sbjct: 648 REIVIRDSKRFHHFKDGLCSCGDYW 672
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 152/326 (46%), Gaps = 18/326 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVL--- 57
G+ D+ S+L MY K G L + K+ +P RNV++W ++I+G QN A + +
Sbjct: 116 GYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERAREAVFLF 175
Query: 58 --------DQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV 109
Y+ + VG D + VIS+C+ + + +H VK G + V
Sbjct: 176 KEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGCLAV 235
Query: 110 ISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQK-E 168
++L+ Y++CG + S K F E +DV W+S+IA Y +G EA +LF M ++ E
Sbjct: 236 GNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGE 295
Query: 169 FEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEA 228
N VT ++L AC+H G + G D +V K + L T +VD+ +CG ++ A
Sbjct: 296 VRYNAVTLSAVLLACAHSGALQIGKCIHDQVV-KMELEDNLVVGTSIVDMYCKCGRVEMA 354
Query: 229 AALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHA 286
+ K N W +++ H A ++ E++ G+ P +L+
Sbjct: 355 RKAFDRLKRK-NVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSH 413
Query: 287 SAKRWQGVSEFREAMRERNVKKEPGV 312
+ +G F + E +V EPG+
Sbjct: 414 AGLLKEGWHWFNKMKCEFDV--EPGI 437
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 76/129 (58%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
+V +W ++IA A++G + L ++ MR + P++ TF I SCS L L G+QIH
Sbjct: 50 SVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQIH 109
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGE 155
+ G D+ V S+LI MYS+CG L+D+ K F E +VV W+SMI+ Y + +
Sbjct: 110 QQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERAR 169
Query: 156 EAINLFEQM 164
EA+ LF++
Sbjct: 170 EAVFLFKEF 178
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 164/449 (36%), Positives = 254/449 (56%), Gaps = 24/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G L+ ++ +Y K + + P + V+AW +I+G QNG E + +
Sbjct: 340 GIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLF 399
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M F P+ +T +++S+C++L +L G+ +H + ++ V ++L+ MY++C
Sbjct: 400 KEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKC 459
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + ++ + F + V W++MI YG HG G EA+ L+ +M + + VTF+S+L
Sbjct: 460 GNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVL 519
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
YACSH GL +G E F MV KYR +P +EHY C+VD+LGR G L++A I+ MPV+
Sbjct: 520 YACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEPG 579
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+W TLL AC HK TD+A +E + ++P YVLLSNI++ + + + R+
Sbjct: 580 PAVWGTLLGACMIHKDTDIARLASERLFELDPGSVGYYVLLSNIYSVERNFPKAASIRQV 639
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
+++R + K PG + +E+ H F GD+SH + +I LE+LT +M+ GY +T
Sbjct: 640 VKKRKLAKSPGCTLIEVNGTPHVFVSGDRSHSHATDIYAKLEKLTGKMREMGYQAETVPA 699
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
+HD++ EEKE + HSEKLAIAF GLI P K+IS
Sbjct: 700 LHDVEEEEKELAVNVHSEKLAIAF-----GLITTEPGNEIRIIKNLRVCLDCHTATKFIS 754
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+I R I+VRDA+RFHHF++G CSCGDYW
Sbjct: 755 KITERVIVVRDANRFHHFKDGICSCGDYW 783
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 127/266 (47%), Gaps = 4/266 (1%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+ L +Y K G + + R + ++IA+ +I+G NG E + + + G R
Sbjct: 248 TGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGER 307
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
T V +I S L IH VK+G L+ V ++ ++Y++ +D +
Sbjct: 308 VSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHL 367
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F E VV W++MI+ Y +G E AI+LF++M + EF N VT ++L AC+ G
Sbjct: 368 FDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSL 427
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
G ++ ++K +P + T +VD+ +CG + EA L +M K N + W T++
Sbjct: 428 SFG-KWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEK-NTVTWNTMIF 485
Query: 250 ACKTHKSTDMAGRIAEEI--LGVNPQ 273
H A ++ E+ LG NP
Sbjct: 486 GYGLHGYGHEALKLYNEMLHLGYNPS 511
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 119/269 (44%), Gaps = 4/269 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ ++ GS+L +Y K +V KV MP R+ + W T+I G +N +D + +
Sbjct: 138 GYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLF 197
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G R D T +V+ + +EL L G I +K G V++ LIS+YS+C
Sbjct: 198 REMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKC 257
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ + F D++ +++MI+ + +G E ++ LF ++ + T V L+
Sbjct: 258 GDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLI 317
Query: 181 YACSHCGLKEKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
S G VK P + T + + +D A L P K
Sbjct: 318 PLHSPFGHLHLACSIHGFCVKSGIILNPTVS--TAFTAIYNKLNEIDLARHLFDESPEKT 375
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEIL 268
+ W ++S + ST+ A + +E++
Sbjct: 376 -VVAWNAMISGYTQNGSTETAISLFKEMM 403
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/280 (20%), Positives = 112/280 (40%), Gaps = 28/280 (10%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ DL + L + + +P ++ + L+ G + N + Y
Sbjct: 39 GYRFDLATLTKLTQKLFDFSATRHARALFFSVPKPDIFLFNVLVRGFSLNDSPSSSISLY 98
Query: 61 -NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+L R PD T+ +++CS L +HA + G +V V S+L+ +Y +
Sbjct: 99 THLRRNTNLSPDNFTYAFAVAACSNDKHL---MLLHAHSIIDGYGSNVFVGSALVDLYCK 155
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
+ + K F D VLW++MI + +++I LF +M + T ++
Sbjct: 156 FSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAV 215
Query: 180 LYACS-----------HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEA 228
L A + C + G F D ++ T ++ L +CG ++ A
Sbjct: 216 LPAAAELQELKVGMGIQCLALKIGFGFCDYVL------------TGLISLYSKCGDVNTA 263
Query: 229 AALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL 268
L R + + + I + ++S + T+ + ++ E+L
Sbjct: 264 RLLFRRIN-RPDLIAYNAMISGFTANGGTECSVKLFRELL 302
>gi|16905194|gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Japonica Group]
gi|31432781|gb|AAP54374.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 698
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 172/445 (38%), Positives = 262/445 (58%), Gaps = 15/445 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIR-NVIAWITLIAGKAQNGLAEDVLDQ 59
GFEL++ ++L MY KS + +V+++ P NV++ ++I G + E+ L
Sbjct: 254 GFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVI 313
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
Y +R G P++ TF S+I C+ A L QG Q+HA+V+K D V S+L+ MY +
Sbjct: 314 YVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGK 373
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG + S++ F E EY + W+++I + HG G EAI F++M N + FVSL
Sbjct: 374 CGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSL 433
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L ACSH GL ++G+++F M + + +P+ EHY+C++D GR G LDEA I MP+K
Sbjct: 434 LTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKP 493
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
NA W +LL AC+ S ++ A+ ++ + P + +V LS I+AS +W+ V R+
Sbjct: 494 NAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRK 553
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
MR+ +KK PG SW++ + H F D SHP+ +I LEELT+ +K GY+PDT
Sbjct: 554 LMRDSRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSF 613
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFA----EHTRGLIVM----------LPFKYISEIKN 405
+++ KE L++HSE++A+AFA T+ +IV FK+I +++
Sbjct: 614 LPCNLEDIAKERILRYHSERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKVER 673
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
R+IIVRD SRFHHF NG+CSCGDYW
Sbjct: 674 RDIIVRDNSRFHHFVNGRCSCGDYW 698
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 141/286 (49%), Gaps = 6/286 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ +L S+LA MY K G L E +V MP ++ +AW +I G A+NG E + +
Sbjct: 152 GFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSF 211
Query: 61 NLMRMVGF-RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
M+ G D+ F SV+S+ L + IH V KAG L+V V ++LI MY++
Sbjct: 212 RDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAK 271
Query: 120 CGCLDDSVKTF-LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
++ + + ++ +VV +SMI Y EEA+ ++ ++ ++ E N+ TF S
Sbjct: 272 SMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSS 331
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
++ C+ L E+G + ++K + T +VD+ G+CG + + L + +
Sbjct: 332 MIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGST-LVDMYGKCGLISLSMQLFNEIEYR 390
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLS 282
+ I W +++ H A + + ++ G+ P A LL+
Sbjct: 391 TD-IAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLT 435
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 89/196 (45%), Gaps = 12/196 (6%)
Query: 12 LAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPD 71
L MY L ++ MP RN ++W TL++G +QN + D L + MR G P
Sbjct: 62 LITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPT 121
Query: 72 KITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFL 131
+ S + + L G Q+H V+ G ++ V S+L MYS+CG L ++ + F
Sbjct: 122 RFALSSAARAAAALGAPLPGAQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFD 181
Query: 132 ECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDV-TFVSLLYACS------ 184
+ D V W++MI Y +G E A+ F M+++ D F S+L A
Sbjct: 182 QMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGW 241
Query: 185 -----HCGLKEKGMEF 195
HC + + G E
Sbjct: 242 LSKSIHCCVTKAGFEL 257
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 70 PDKITFV---SVISSCSELATLGQGQQIHAEVVKAGASLDVGVISS-LISMYSRCGCLDD 125
PD T V S++ SC L +G+ +HA +V +GA+ +++ LI+MYS C L
Sbjct: 15 PDAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLAS 74
Query: 126 SVKTFLECEYSDVVLWSSMIAA 147
+++ F + V W+++++
Sbjct: 75 ALRLFAAMPRRNAVSWTTLVSG 96
>gi|15232648|ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g46790, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis thaliana]
gi|110741961|dbj|BAE98921.1| hypothetical protein [Arabidopsis thaliana]
gi|332644684|gb|AEE78205.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 168/446 (37%), Positives = 269/446 (60%), Gaps = 16/446 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ + ++L MY + G + V MP+RNV++W +IA A+NG A + L +
Sbjct: 212 GYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTF 271
Query: 61 N-LMRMV-GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
+MR P+ +T VSV+ +C+ LA L QG+ IH +++ G + VIS+L++MY
Sbjct: 272 REMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYG 331
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
RCG L+ + F DVV W+S+I++YG HG G++AI +FE+M VTFVS
Sbjct: 332 RCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVS 391
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+L ACSH GL E+G F+ M + + KP++EHY C+VDLLGR LDEAA ++++M +
Sbjct: 392 VLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTE 451
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
+W +LL +C+ H + ++A R + + + P++A YVLL++I+A A+ W V +
Sbjct: 452 PGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVK 511
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
+ + R ++K PG W+E++ +++ F D+ +P +I +L +L +MK +GY+P T
Sbjct: 512 KLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTK 571
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAFA----------EHTRGLIVM----LPFKYISEIK 404
++++++EEKE + HSEKLA+AF T+ L + L K+IS+
Sbjct: 572 GVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFM 631
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
+EI+VRD +RFH F+NG CSCGDYW
Sbjct: 632 EKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 148/318 (46%), Gaps = 12/318 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + D + L MY GS+ KV R + W L G E+VL Y
Sbjct: 107 GSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLY 166
Query: 61 NLMRMVGFRPDKITFVSVISSC--SELAT--LGQGQQIHAEVVKAGASLDVGVISSLISM 116
M +G D+ T+ V+ +C SE L +G++IHA + + G S V ++++L+ M
Sbjct: 167 WKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDM 226
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM--EQKEFEANDV 174
Y+R GC+D + F +VV WS+MIA Y +GK EA+ F +M E K+ N V
Sbjct: 227 YARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSV 286
Query: 175 TFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRN 234
T VS+L AC+ E+G ++++ L + +V + GRCG L+ +
Sbjct: 287 TMVSVLQACASLAALEQGKLIHGYILRR-GLDSILPVISALVTMYGRCGKLEVGQRVFDR 345
Query: 235 MPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRW--- 291
M + + + W +L+S+ H A +I EE+L N P +S + A +
Sbjct: 346 MHDR-DVVSWNSLISSYGVHGYGKKAIQIFEEMLA-NGASPTPVTFVSVLGACSHEGLVE 403
Query: 292 QGVSEFREAMRERNVKKE 309
+G F R+ +K +
Sbjct: 404 EGKRLFETMWRDHGIKPQ 421
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 101/212 (47%), Gaps = 7/212 (3%)
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P + T+ +I C ++L ++H ++ G+ D + + LI MYS G +D + K
Sbjct: 75 PSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKV 134
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC--SHCG 187
F + + +W+++ A G GEE + L+ +M + E++ T+ +L AC S C
Sbjct: 135 FDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECT 194
Query: 188 LKE--KGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
+ KG E + ++ + T +VD+ R G +D A+ + MPV+ N + W
Sbjct: 195 VNHLMKGKEIHAHLTRR-GYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVR-NVVSWS 252
Query: 246 TLLSACKTHKSTDMAGRIAEEILGVNPQDAAP 277
+++ + A R E++ +D++P
Sbjct: 253 AMIACYAKNGKAFEALRTFREMMR-ETKDSSP 283
>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
Length = 787
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 167/441 (37%), Positives = 266/441 (60%), Gaps = 15/441 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
DL+ + + +Y G++ ++ + ++V++W ++I+ NGLA + L + LM+
Sbjct: 347 DLMMQNMIIDVYADCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMK 406
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
PD IT VS++S+ + L+ L +G++IH + + G L+ ++SL+ MY+ CG L+
Sbjct: 407 ETSVEPDSITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLE 466
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
++ K F+ +VLW++MI AYG HG+G+ A+ LF ME ++ + +TF++LLYACS
Sbjct: 467 NAYKVFICTRSKSLVLWTTMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYACS 526
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL +G + M KY+ +P EHY C+VDLLGR +L+EA +++M ++ A +W
Sbjct: 527 HSGLINEGKRLLETMKCKYQLEPWPEHYACLVDLLGRANHLEEAYHFVKSMQIEPTAEVW 586
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
L AC+ H + + A+++L ++P YVL+SN+ A++ RW+ V E R M+
Sbjct: 587 CAFLGACRIHSNKKLGEIAAQKLLDLDPDSPGSYVLISNVFAASGRWKDVEEVRMRMKGG 646
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEM-KLRGYVPDTGADMHD 363
+KK PG SW+E+ N+VH F + DKSHP S +I L ++T ++ K GYVP T +H+
Sbjct: 647 GLKKNPGCSWIEVGNKVHTFLVRDKSHPESYKIYQKLAQITEKLEKEGGYVPQTKLVLHN 706
Query: 364 MDSEEKEYNLKHHSEKLAIAFA----------EHTRGLIVMLP----FKYISEIKNREII 409
+ EEK L HSE+LAIA+ T+ L V + K +S+ RE+I
Sbjct: 707 VGKEEKVQMLYGHSERLAIAYGLMSTSEGTPIRITKNLRVCVDCHTFCKLVSKFFERELI 766
Query: 410 VRDASRFHHFRNGKCSCGDYW 430
VRDASRFHHF +G CSCGD+W
Sbjct: 767 VRDASRFHHFEDGVCSCGDFW 787
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 133/267 (49%), Gaps = 10/267 (3%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
LD+ ++L M+++ G + ++ + ++ I W ++IAG QNGL + L + +
Sbjct: 145 LDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAGFTQNGLYNEALQFFCGL 204
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
+ +PD+++ +S++++ L L G++IHA +K ++ + ++LI MYS+C C+
Sbjct: 205 QDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCV 264
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
+ F + D++ W+++IAAY + EA+ L +++ K + + + S L AC
Sbjct: 265 AYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLAC 324
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
S E +K R L ++D+ CG ++ A + ++ K + +
Sbjct: 325 SGLRCLSHAKEVHGYTLK--RGLSDLMMQNMIIDVYADCGNINYATRMFESIKCK-DVVS 381
Query: 244 WKTLLSACKTHKSTDMAGRIAEEILGV 270
W +++S C H +A E LGV
Sbjct: 382 WTSMIS-CYVHNG------LANEALGV 401
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 125/251 (49%), Gaps = 3/251 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRN-VIAWITLIAGKAQNGLAEDVLDQ 59
G++ + +SL MY K ++ K+ M RN V++W ++I+ + NG + L
Sbjct: 40 GYDSIVFVANSLVSMYAKCNDILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGL 99
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ M+ G + T V+ + +C + + G +IHA ++K+ LDV V ++L++M+ R
Sbjct: 100 FREMQKAGVGANTYTLVAALQACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVR 159
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G + + + F E + D + W+SMIA + +G EA+ F ++ + ++V+ +S+
Sbjct: 160 FGKMSYAARIFDELDEKDNITWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISI 219
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L A G G E +K + L ++D+ +C + A L+ + +
Sbjct: 220 LAASGRLGYLLNGKEIHAYAMKNW-LDSNLRIGNTLIDMYSKCCCV-AYAGLVFDKMINK 277
Query: 240 NAIIWKTLLSA 250
+ I W T+++A
Sbjct: 278 DLISWTTVIAA 288
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 101/191 (52%), Gaps = 7/191 (3%)
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
MR++G D TF V+ +C + + +G +IH ++K G V V +SL+SMY++C
Sbjct: 1 MRVLGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCND 60
Query: 123 LDDSVKTFLEC-EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+ + K F E +DVV W+S+I+AY +G+ EA+ LF +M++ AN T V+ L
Sbjct: 61 ILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQ 120
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY--TCVVDLLGRCGYLDEAAALIRNMPVKA 239
AC K+ GME ++K L+ Y +V + R G + AA + + K
Sbjct: 121 ACEDSSFKKLGMEIHAAILKS---NQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKD 177
Query: 240 NAIIWKTLLSA 250
N I W ++++
Sbjct: 178 N-ITWNSMIAG 187
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 49/94 (52%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF L+ +SL MY GSL KV ++++ W T+I +G + ++ +
Sbjct: 444 GFMLEGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVLWTTMINAYGMHGRGKAAVELF 503
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQI 94
++M PD ITF++++ +CS + +G+++
Sbjct: 504 SIMEDQKLIPDHITFLALLYACSHSGLINEGKRL 537
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 171/440 (38%), Positives = 254/440 (57%), Gaps = 24/440 (5%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L MY K G L ++ M R+VI+W +I G ++ L + M G
Sbjct: 300 NALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVE 359
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P +ITF+S++ SC+ L + G+ IHA + K S+ + +SLI +Y++CG + + +
Sbjct: 360 PTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQV 419
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F + + W++MI HG+ ++A LF +M E N++TFV +L AC H GL
Sbjct: 420 FDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLV 479
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
+ G +FF MV+ Y+ P+ +HY C++DLLGR G +EA +L++NM VK + IW +LL
Sbjct: 480 DLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLG 539
Query: 250 ACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKE 309
AC+ H ++ +AE + + P + YVLLSNI+A A +W V+ R + +R +KK
Sbjct: 540 ACRDHGRVELGELVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDRGMKKV 599
Query: 310 PGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEK 369
PG + +E+ N VH+F +GDK HP+S +I LEE+ ++K+ G+V DT ++DMD E K
Sbjct: 600 PGCTTIEVDNVVHEFLVGDKVHPQSEDIYRMLEEVDEQLKVFGFVADTSEVLYDMDEEWK 659
Query: 370 EYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREIIV 410
E L HHSEKLAIAF GLI P K IS+I NREII
Sbjct: 660 EGALSHHSEKLAIAF-----GLISTKPGTPIRIIKNLRVCRNCHSATKLISKIFNREIIA 714
Query: 411 RDASRFHHFRNGKCSCGDYW 430
RD +RFHHF++G CSC DYW
Sbjct: 715 RDRNRFHHFKDGSCSCNDYW 734
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 140/280 (50%), Gaps = 4/280 (1%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D ++ ++L Y G + ++ MP+++V++W +IAG AQ G +++ L + MR
Sbjct: 194 DAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMR 253
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
P++ T VSV+S+C++ L G + + + G ++ ++++LI MYS+CG L
Sbjct: 254 KANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQ 313
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ + F + DV+ W+ MI Y +EA+ LF +M E ++TF+S+L +C+
Sbjct: 314 TARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCA 373
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H G + G ++ + K T ++DL +CG + A + M +K+ A W
Sbjct: 374 HLGAIDLG-KWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLA-SW 431
Query: 245 KTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLS 282
++ H D A + ++ G+ P + +LS
Sbjct: 432 NAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILS 471
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 122/272 (44%), Gaps = 35/272 (12%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
N+ W ++I G + + L + M G P+ TF ++ SC++LA+ +G+QIH
Sbjct: 93 NLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIH 152
Query: 96 AEVVKAGASLDVGVISSLISMYSRC-------------------------------GCLD 124
A V+K G DV + +SLI+MY++ G +D
Sbjct: 153 AHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMD 212
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ + F E DVV W++MIA Y G+ +EA+ LFE M + N+ T VS+L AC+
Sbjct: 213 RARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACA 272
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
+ G ++ L+ ++D+ +CG L A L +M ++ + I W
Sbjct: 273 QSNALDLGNSMRS-WIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDM-LERDVISW 330
Query: 245 KTLLSACKTHKSTDMAGRIAEEIL--GVNPQD 274
++ S A + E+L GV P +
Sbjct: 331 NVMIGGYTHMCSYKEALALFREMLASGVEPTE 362
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 81/207 (39%), Gaps = 36/207 (17%)
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLI--SMYSRCGCLDDSVKTFLEC 133
+ ++S C + T +QIHA ++K G + +S LI S SR G + ++ F
Sbjct: 33 LKLLSKCQSIRTF---KQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSI 89
Query: 134 EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGM 193
E ++ +W+SMI A+ F +M E N TF LL +C+ +G
Sbjct: 90 EEPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGK 149
Query: 194 E---------------FFDLMVKKYRRKPRLEH---------------YTCVVDLLGRCG 223
+ ++ Y + + + +T ++ G
Sbjct: 150 QIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWG 209
Query: 224 YLDEAAALIRNMPVKANAIIWKTLLSA 250
Y+D A L MPVK + + W +++
Sbjct: 210 YMDRARQLFDEMPVK-DVVSWNAMIAG 235
>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g13650-like [Cucumis sativus]
Length = 1037
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 180/444 (40%), Positives = 265/444 (59%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF DL ++L +Y + G + E + +N I+W +L++G AQ+G E+ L +
Sbjct: 594 GFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVF 653
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M + T+ S IS+ + LA + QGQQIH+ V+K G + V +SLIS+Y++
Sbjct: 654 VRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKS 713
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + D+ + F + +V+ W++MI Y HG G EA+ LFE+M+ N VTFV +L
Sbjct: 714 GSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVL 773
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL ++G+++F+ M K + P+ EHY CVVDLLGR G LD A I+ MP+ A+
Sbjct: 774 SACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPAD 833
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A+IW+TLLSAC HK+ ++ R A +L + P+D+A YVL+SNI+A +++W R+
Sbjct: 834 AMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKL 893
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M++ VKKEPG SW+E+KN VH F GDK HP + +I Y+ L GYV D+ +
Sbjct: 894 MKDXGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLNRRTSEIGYVQDSFSL 953
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP--------------FKYISEIKNR 406
+++ + +K+ HSEKLAIAF + G + + KY+S+I NR
Sbjct: 954 LNESEQGQKDPITHVHSEKLAIAFGLLSLGNNIPIRVMKNLRVCNDCHNWIKYVSKISNR 1013
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
IIVRDA RFHHF G CSC D+W
Sbjct: 1014 SIIVRDAHRFHHFDGGVCSCKDFW 1037
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 141/269 (52%), Gaps = 6/269 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF + + L +Y +S L+ E++ M R+ +++ +LI+G Q G ++ L+ +
Sbjct: 291 GFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELF 350
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ +PD IT S++S+C+ + L +G Q+H+ +KAG S D+ + SL+ +YS+C
Sbjct: 351 TKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKC 410
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
++ + K FL E ++VLW+ M+ AYG ++ +F QM+ + N T+ S+L
Sbjct: 411 ADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSIL 470
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC--VVDLLGRCGYLDEAAALIRNMPVK 238
C+ G G + ++K +L Y C ++D+ + G L A ++R +P +
Sbjct: 471 RTCTSLGALYLGEQIHTHVIKT---GFQLNVYVCSVLIDMYAKYGQLALALRILRRLP-E 526
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEI 267
+ + W +++ H A ++ EE+
Sbjct: 527 DDVVSWTAMIAGYVQHDMFSEALQLFEEM 555
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 144/284 (50%), Gaps = 4/284 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+L++ S L MY K G L +++R +P +V++W +IAG Q+ + + L +
Sbjct: 493 GFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLF 552
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G + D I F S IS+C+ + L QGQQIHA+ AG D+ + ++LIS+Y+RC
Sbjct: 553 EEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARC 612
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + ++ F + + + W+S+++ G EEA+ +F +M + E E N T+ S +
Sbjct: 613 GRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAI 672
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
A + ++G + +++K R E ++ L + G + +A +M + N
Sbjct: 673 SAAASLANIKQGQQIHSMVLKTGYDSER-EVSNSLISLYAKSGSISDAWREFNDMSER-N 730
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEE--ILGVNPQDAAPYVLLS 282
I W +++ H A R+ EE + G+ P +LS
Sbjct: 731 VISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLS 774
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 119/252 (47%), Gaps = 6/252 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D++ SL +Y K + K N++ W ++ Q D + +
Sbjct: 392 GMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIF 451
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+M G P++ T+ S++ +C+ L L G+QIH V+K G L+V V S LI MY++
Sbjct: 452 RQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKY 511
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L +++ DVV W++MIA Y H EA+ LFE+ME + + +++ F S +
Sbjct: 512 GQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAI 571
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRR--KPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
AC+ +G + + + Y L ++ L RCG + EA + K
Sbjct: 572 SACAGIRALRQGQQ---IHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDK 628
Query: 239 ANAIIWKTLLSA 250
N I W +L+S
Sbjct: 629 -NNISWNSLVSG 639
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 123/250 (49%), Gaps = 2/250 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ + + L +Y K+G + +KV + +++++ W+ +I+G +QNGL E+ + +
Sbjct: 190 GFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLF 249
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M P SV+S+ +++ G+Q+H V+K G + V + L+++YSR
Sbjct: 250 CDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRS 309
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
L + + F D V ++S+I+ G + A+ LF +M++ + + +T SLL
Sbjct: 310 RKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLL 369
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+ G KGM+ +K + + ++DL +C ++ A + N
Sbjct: 370 SACASVGALHKGMQLHSHAIKAGMSADIILEGS-LLDLYSKCADVETAHKFFLXTETE-N 427
Query: 241 AIIWKTLLSA 250
++W +L A
Sbjct: 428 IVLWNVMLVA 437
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 111/288 (38%), Gaps = 36/288 (12%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ + + SL Y + G KV R+V +W +I V +
Sbjct: 88 GFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLF 147
Query: 61 NLMRMVGFRPDKITFVSVISSC--SELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
M G P+ TF V+ +C ++A +Q+H+ G V + LI +YS
Sbjct: 148 RRMLAEGITPNGYTFAGVLKACVGGDIA-FNYVKQVHSRTFYYGFDSSPLVANLLIDLYS 206
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+ G ++ + K F D+V W +MI+ +G EEAI LF M E S
Sbjct: 207 KNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSS 266
Query: 179 LLYACSHCGLKEKGMEFFDLMVK---------------KYRRKPRL-------------- 209
+L A + L E G + L++K Y R +L
Sbjct: 267 VLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRD 326
Query: 210 -EHYTCVVDLLGRCGYLDEAAALIRNMP---VKANAIIWKTLLSACKT 253
Y ++ L + G+ D A L M +K + I +LLSAC +
Sbjct: 327 GVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACAS 374
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 92/234 (39%), Gaps = 12/234 (5%)
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
N M G R + ++ ++ C +L + ++H + K+G + +I SL+ Y R
Sbjct: 47 NFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRH 106
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +VK F E V W+ MI + + LF +M + N TF +L
Sbjct: 107 GDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVL 166
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC + ++ Y ++DL + GY+ E+A + N +
Sbjct: 167 KACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYI-ESAKKVFNCICMKD 225
Query: 241 AIIWKTLLSACKTHKSTDMAGRI-----AEEILGVNPQDAAPYVLLSNIHASAK 289
+ W ++S + + A + A EI PYVL S + AS K
Sbjct: 226 IVTWVAMISGLSQNGLEEEAILLFCDMHASEIF------PTPYVLSSVLSASTK 273
>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 740
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 170/444 (38%), Positives = 255/444 (57%), Gaps = 24/444 (5%)
Query: 6 LVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRM 65
+ GS+L MY K L + V M +NV++W ++ G Q G A + + + M+
Sbjct: 302 IYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQR 361
Query: 66 VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD 125
G PD T IS+C+ +++L +G Q H + + AG + V +SL+++Y +CG +DD
Sbjct: 362 SGIDPDHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDD 421
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
S + F E D V W++M++AY G+ EAI LF++M Q + + VT ++ ACS
Sbjct: 422 STRLFNEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSR 481
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
GL EKG +F+LM+ +Y P HY+C++DL R G ++EA I MP + +AI W
Sbjct: 482 AGLVEKGQRYFELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWT 541
Query: 246 TLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERN 305
TLLSAC+ + ++ AE ++ ++P A Y LLS+I+AS +W V++ R M+E+N
Sbjct: 542 TLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDCVAQLRRGMKEKN 601
Query: 306 VKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMD 365
V+KEPG SW++ K ++H F+ D+S P S +I LEEL ++ GY PDT HD++
Sbjct: 602 VRKEPGQSWIKWKGKLHSFSADDESSPYSDQIYAKLEELYQKIIDNGYKPDTSFVHHDVE 661
Query: 366 SEEKEYNLKHHSEKLAIAFAEHTRGLIVM---LPF----------------KYISEIKNR 406
K L HSE+LAIAF GLI + LP K+IS + R
Sbjct: 662 EAVKIKMLNCHSERLAIAF-----GLIFVPSGLPIRVGKNLRVCVDCHNATKHISSVTGR 716
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EI+VRDA RFH F++G CSCGD+W
Sbjct: 717 EILVRDAVRFHRFKDGTCSCGDFW 740
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 134/284 (47%), Gaps = 40/284 (14%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVI---------------------- 38
GFE L+ GS L MY K G + + +KV + RN +
Sbjct: 166 GFESYLLVGSPLLDMYSKVGCISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLF 225
Query: 39 --------AWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQ 90
+W +I G AQNG+ ++ ++ + M++ G + D+ F SV+ +C L +
Sbjct: 226 RGMEKDSVSWSAMIKGLAQNGMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAIND 285
Query: 91 GQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGF 150
G+QIHA +++ + V S+LI MY +C CL + F + +VV W++M+ YG
Sbjct: 286 GRQIHACIIRTNLQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQ 345
Query: 151 HGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLE 210
G+ EA+ +F M++ + + T + AC++ E+G +F + L
Sbjct: 346 TGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACANISSLEEGSQFHGKAI-----TAGLI 400
Query: 211 HYTCV----VDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
HY V V L G+CG +D++ L M V+ + + W ++SA
Sbjct: 401 HYITVSNSLVTLYGKCGDIDDSTRLFNEMNVR-DEVSWTAMVSA 443
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 135/319 (42%), Gaps = 40/319 (12%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
+L + ++L Y KSG L E E+ +P R+ + W LI G + +GL + YN M
Sbjct: 68 NLFSWNNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTM- 126
Query: 65 MVGFRPD--KITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M F + ++T ++++ S + G+QIH +V+K G + V S L+ MYS+ GC
Sbjct: 127 MKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGC 186
Query: 123 LDDSVKTF------------------LECEY------------SDVVLWSSMIAAYGFHG 152
+ D+ K F L C D V WS+MI +G
Sbjct: 187 ISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQNG 246
Query: 153 KGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY 212
+EAI F +M+ + + + F S+L AC G G + +++ + +
Sbjct: 247 MEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRT-NLQDHIYVG 305
Query: 213 TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNP 272
+ ++D+ +C L A + M K N + W ++ + T AG + L +
Sbjct: 306 SALIDMYCKCKCLHYAKTVFDRMKQK-NVVSWTAMVVG---YGQTGRAGEAVKIFLDMQR 361
Query: 273 QDAAP--YVLLSNIHASAK 289
P Y L I A A
Sbjct: 362 SGIDPDHYTLGQAISACAN 380
>gi|125575213|gb|EAZ16497.1| hypothetical protein OsJ_31969 [Oryza sativa Japonica Group]
Length = 617
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 172/445 (38%), Positives = 262/445 (58%), Gaps = 15/445 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIR-NVIAWITLIAGKAQNGLAEDVLDQ 59
GFEL++ ++L MY KS + +V+++ P NV++ ++I G + E+ L
Sbjct: 173 GFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVI 232
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
Y +R G P++ TF S+I C+ A L QG Q+HA+V+K D V S+L+ MY +
Sbjct: 233 YVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGK 292
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG + S++ F E EY + W+++I + HG G EAI F++M N + FVSL
Sbjct: 293 CGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSL 352
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L ACSH GL ++G+++F M + + +P+ EHY+C++D GR G LDEA I MP+K
Sbjct: 353 LTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKP 412
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
NA W +LL AC+ S ++ A+ ++ + P + +V LS I+AS +W+ V R+
Sbjct: 413 NAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRK 472
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
MR+ +KK PG SW++ + H F D SHP+ +I LEELT+ +K GY+PDT
Sbjct: 473 LMRDSRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSF 532
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFA----EHTRGLIVM----------LPFKYISEIKN 405
+++ KE L++HSE++A+AFA T+ +IV FK+I +++
Sbjct: 533 LPCNLEDIAKERILRYHSERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKVER 592
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
R+IIVRD SRFHHF NG+CSCGDYW
Sbjct: 593 RDIIVRDNSRFHHFVNGRCSCGDYW 617
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 141/286 (49%), Gaps = 6/286 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ +L S+LA MY K G L E +V MP ++ +AW +I G A+NG E + +
Sbjct: 71 GFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSF 130
Query: 61 NLMRMVGF-RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
M+ G D+ F SV+S+ L + IH V KAG L+V V ++LI MY++
Sbjct: 131 RDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAK 190
Query: 120 CGCLDDSVKTF-LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
++ + + ++ +VV +SMI Y EEA+ ++ ++ ++ E N+ TF S
Sbjct: 191 SMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSS 250
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
++ C+ L E+G + ++K + T +VD+ G+CG + + L + +
Sbjct: 251 MIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGST-LVDMYGKCGLISLSMQLFNEIEYR 309
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLS 282
+ I W +++ H A + + ++ G+ P A LL+
Sbjct: 310 TD-IAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLT 354
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 83/176 (47%), Gaps = 12/176 (6%)
Query: 32 MPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQG 91
MP RN ++W TL++G +QN + D L + MR G P + S + + L G
Sbjct: 1 MPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPG 60
Query: 92 QQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFH 151
Q+H V+ G ++ V S+L MYS+CG L ++ + F + D V W++MI Y +
Sbjct: 61 AQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKN 120
Query: 152 GKGEEAINLFEQMEQKEFEANDV-TFVSLLYACS-----------HCGLKEKGMEF 195
G E A+ F M+++ D F S+L A HC + + G E
Sbjct: 121 GSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFEL 176
>gi|125532437|gb|EAY79002.1| hypothetical protein OsI_34111 [Oryza sativa Indica Group]
Length = 847
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 172/445 (38%), Positives = 262/445 (58%), Gaps = 15/445 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIR-NVIAWITLIAGKAQNGLAEDVLDQ 59
GFEL++ ++L MY KS + +V+++ P NV++ ++I G + E+ L
Sbjct: 403 GFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVI 462
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
Y +R G P++ TF S+I C+ A L QG Q+HA+V+K D V S+L+ MY +
Sbjct: 463 YVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGK 522
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG + S++ F E EY + W+++I + HG G EAI F++M N + FVSL
Sbjct: 523 CGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSL 582
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L ACSH GL ++G+++F M + + +P+ EHY+C++D GR G LDEA I MP+K
Sbjct: 583 LTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKP 642
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
NA W +LL AC+ S ++ A+ ++ + P + +V LS I+AS +W+ V R+
Sbjct: 643 NAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRK 702
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
MR+ +KK PG SW++ + H F D SHP+ +I LEELT+ +K GY+PDT
Sbjct: 703 LMRDSRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSF 762
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFA----EHTRGLIVM----------LPFKYISEIKN 405
+++ KE L++HSE++A+AFA T+ +IV FK+I +++
Sbjct: 763 LPCNLEDIAKERILRYHSERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKVER 822
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
R+IIVRD SRFHHF NG+CSCGDYW
Sbjct: 823 RDIIVRDNSRFHHFVNGRCSCGDYW 847
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 141/286 (49%), Gaps = 6/286 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ +L S+LA MY K G L E +V MP ++ +AW +I G A+NG E + +
Sbjct: 301 GFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSF 360
Query: 61 NLMRMVGF-RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
M+ G D+ F SV+S+ L + IH V KAG L+V V ++LI MY++
Sbjct: 361 RDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAK 420
Query: 120 CGCLDDSVKTF-LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
++ + + ++ +VV +SMI Y EEA+ ++ ++ ++ E N+ TF S
Sbjct: 421 SMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSS 480
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
++ C+ L E+G + ++K + T +VD+ G+CG + + L + +
Sbjct: 481 MIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGST-LVDMYGKCGLISLSMQLFNEIEYR 539
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLS 282
+ I W +++ H A + + ++ G+ P A LL+
Sbjct: 540 TD-IAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLT 584
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 86/196 (43%), Gaps = 13/196 (6%)
Query: 12 LAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPD 71
L MY L ++ MP RN ++W TL++G +QN + D L + MR G P
Sbjct: 212 LITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPT 271
Query: 72 KITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFL 131
+ S + + L + + A G ++ V S+L MYS+CG L ++ + F
Sbjct: 272 RFALSSAARAAAALGAPLRARSCTAS-ASVGFDTELFVASNLADMYSKCGLLSEACRVFD 330
Query: 132 ECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDV-TFVSLLYACS------ 184
+ D V W++MI Y +G E A+ F M+++ D F S+L A
Sbjct: 331 QMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGW 390
Query: 185 -----HCGLKEKGMEF 195
HC + + G E
Sbjct: 391 LSKSIHCCVTKAGFEL 406
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 73/184 (39%), Gaps = 49/184 (26%)
Query: 12 LAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPD 71
L MY L ++ MP RN ++W TL++G +QN + D L + MR G P
Sbjct: 62 LITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPT 121
Query: 72 KITF------------------------------------------------VSVISSCS 83
++ + S++ SC
Sbjct: 122 RLIYETKFHNTLGPKHTLAASHCHSGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCG 181
Query: 84 ELATLGQGQQIHAEVVKAGASLDVGVISS-LISMYSRCGCLDDSVKTFLECEYSDVVLWS 142
L +G+ +HA +V +GA+ +++ LI+MYS C L +++ F + V W+
Sbjct: 182 RAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWT 241
Query: 143 SMIA 146
++++
Sbjct: 242 TLVS 245
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 73 ITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISS-LISMYSRCGCLDDSVKTFL 131
+ S++ SC L +G+ +HA +V +GA+ +++ LI+MYS C L +++ F
Sbjct: 21 VHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFA 80
Query: 132 ECEYSDVVLWSSMIA 146
+ V W+++++
Sbjct: 81 AMPRRNAVSWTTLVS 95
>gi|125532805|gb|EAY79370.1| hypothetical protein OsI_34497 [Oryza sativa Indica Group]
Length = 681
Score = 328 bits (841), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 174/446 (39%), Positives = 257/446 (57%), Gaps = 19/446 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +D+V +SL MY K+G L +V LM RN ++W +I+G AQNG +++ L +
Sbjct: 239 GMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLF 298
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVI--SSLISMYS 118
M+ G +PD VS + +CS + L G+ +H +V+ D I ++ I MYS
Sbjct: 299 RNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVR---RFDFNCILGTAAIDMYS 355
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+CG L + F D++LW++MIA G HG+G++A+ LF++M + + TF S
Sbjct: 356 KCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFAS 415
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
LL A SH GL E+G +F MV ++ P +HY C+VDLL R G ++EA+ L+ +M +
Sbjct: 416 LLSALSHSGLVEEGKLWFGCMVNHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAE 475
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
IW LLS C +K ++ IA+ IL + P D L+SN++A+ K+W V + R
Sbjct: 476 PTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSNLYAATKKWDKVRQVR 535
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
+ M++ KK PG S +EI+ H F M D+SHP+ EI + +L EM+ GY+P T
Sbjct: 536 KLMKDSGSKKMPGCSSIEIRGTRHAFLMEDQSHPQREEIVSKVAKLDLEMRKMGYIPRTE 595
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRG----LIVML----------PFKYISEIK 404
HD++ E KE L +HSEKLAIAF G L+++ KYIS+I
Sbjct: 596 FVYHDLEEEVKEQQLSYHSEKLAIAFGLLNTGPGTRLVIIKNLRVCGDCHDAIKYISKIA 655
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
+REI+VRDA RFHHF++G CSC DYW
Sbjct: 656 DREIVVRDAKRFHHFKDGVCSCRDYW 681
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 155/314 (49%), Gaps = 12/314 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G++ D+ SSL H+Y + G++ + KV MP R+ + W T++AG G D + Y
Sbjct: 138 GYKDDVFVCSSLLHLYARWGAMGDAVKVFDRMPRRDRVTWSTMVAGFVSAGQPLDAIQMY 197
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
MR G + D++ + VI +C+ + G +H +++ G +DV +SL+ MY++
Sbjct: 198 RRMREDGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKN 257
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G LD + + F + + V WS+MI+ + +G+ +EA+ LF M+ + + VS L
Sbjct: 258 GLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSAL 317
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACS+ G + G +V+++ L T +D+ +CG L A L NM +
Sbjct: 318 LACSNIGFLKLGRSVHGFIVRRFDFNCILG--TAAIDMYSKCGSLASAQMLF-NMISDRD 374
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLSNIHAS-----AKRWQG 293
I+W +++ C H A + +E+ G+ P A LLS + S K W G
Sbjct: 375 LILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFG 434
Query: 294 --VSEFREAMRERN 305
V+ F+ E++
Sbjct: 435 CMVNHFKITPAEKH 448
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 100/210 (47%), Gaps = 4/210 (1%)
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
RPD TF +S+C+ L L G+ + AG DV V SSL+ +Y+R G + D+VK
Sbjct: 105 RPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVK 164
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F D V WS+M+A + G+ +AI ++ +M + + ++V + ++ AC+
Sbjct: 165 VFDRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARN 224
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
G +++ R + T +VD+ + G LD A + + V N + W ++
Sbjct: 225 VRMGASVHGHLLRHGMRMDVVT-ATSLVDMYAKNGLLD-VACRVFGLMVHRNDVSWSAMI 282
Query: 249 SACKTHKSTDMAGRIAEEIL--GVNPQDAA 276
S + +D A R+ + G+ P A
Sbjct: 283 SGFAQNGQSDEALRLFRNMQASGIQPDSGA 312
>gi|242062682|ref|XP_002452630.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
gi|241932461|gb|EES05606.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
Length = 605
Score = 328 bits (841), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 173/446 (38%), Positives = 259/446 (58%), Gaps = 25/446 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D + +++ YM +G++ + + R MP+RN+++W ++AG +N A D L + M
Sbjct: 165 DAILWTAMVSGYMDTGNVQKAMEYFRAMPVRNLVSWNAVVAGYVKNSRAGDALRVFKTMV 224
Query: 65 MVGF-RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
+P+ T SV+ CS L+ LG G+Q+H +K + V +SL+SMY +CG L
Sbjct: 225 EDAIVQPNPSTLSSVLLGCSNLSALGFGRQVHQWCMKLPLGRSITVGTSLLSMYCKCGDL 284
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
DD+ K F E D+V W++MI+ Y HG G +AI LFE+M+ + + +T +++L AC
Sbjct: 285 DDACKLFDEMHTKDIVAWNAMISGYAQHGGGRKAIKLFEKMKDEGVVPDWITLLAVLTAC 344
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
H GL + G++ F+ M + Y +P+++HY+C+VDLL R G L+ A +I +MP + +
Sbjct: 345 IHTGLCDFGIQCFETMQEAYNIEPQVDHYSCMVDLLCRAGLLERAVNMIHSMPFEPHPSA 404
Query: 244 WKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
+ TLL+AC+ +K+ + A A +++ +PQ+A YV L+NI+A A RW VS R M++
Sbjct: 405 YGTLLTACRVYKNLEFAEFAARKLIEQDPQNAGAYVQLANIYAVANRWDDVSRVRRWMKD 464
Query: 304 RNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHD 363
V K PG SW+EIK H+F D+ HP+ I L+ L MK GY PD +HD
Sbjct: 465 NAVVKTPGYSWMEIKGVRHEFRSNDRLHPQLDLIHDKLDRLGKLMKAMGYSPDLDFALHD 524
Query: 364 MDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIK 404
++ K L HSEKLAIAF GLI P K IS+I+
Sbjct: 525 VEESLKSQMLMRHSEKLAIAF-----GLISTSPGMTLRIFKNLRICGDCHNAAKLISKIE 579
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
+REII+RD +RFHHFR G CSCGDYW
Sbjct: 580 DREIILRDTTRFHHFRGGHCSCGDYW 605
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/264 (20%), Positives = 123/264 (46%), Gaps = 10/264 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D V+ ++L + G + +V MP+R+V +W T+++G ++NG E+ + M
Sbjct: 71 DAVSYNTLLSCHFACGDIDGAWRVFSTMPVRDVTSWNTMVSGLSKNGAIEEAEAMFRAMP 130
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+ +++ +++++ + +G + + A D + ++++S Y G +
Sbjct: 131 A----RNAVSWNAMVAARASSGDMGAAENLFR---NAPEKTDAILWTAMVSGYMDTGNVQ 183
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM-EQKEFEANDVTFVSLLYAC 183
+++ F ++V W++++A Y + + +A+ +F+ M E + N T S+L C
Sbjct: 184 KAMEYFRAMPVRNLVSWNAVVAGYVKNSRAGDALRVFKTMVEDAIVQPNPSTLSSVLLGC 243
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
S+ G + +K + + T ++ + +CG LD+A L M K + +
Sbjct: 244 SNLSALGFGRQVHQWCMKLPLGR-SITVGTSLLSMYCKCGDLDDACKLFDEMHTK-DIVA 301
Query: 244 WKTLLSACKTHKSTDMAGRIAEEI 267
W ++S H A ++ E++
Sbjct: 302 WNAMISGYAQHGGGRKAIKLFEKM 325
>gi|224129498|ref|XP_002320601.1| predicted protein [Populus trichocarpa]
gi|222861374|gb|EEE98916.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 328 bits (841), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 170/435 (39%), Positives = 257/435 (59%), Gaps = 25/435 (5%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y++ G L ++ MP ++V++W +I+G AQNG ++ ++ ++ M++ P+ +T
Sbjct: 200 YVRMGDLRASRELFDSMPNKSVVSWNVMISGCAQNGHFKEAIEMFHDMQLGDVPPNYVTL 259
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLEC-E 134
VSV+ + S L + G+ +H K +D + S+LI MYS+CG +D +V+ F
Sbjct: 260 VSVLPAVSRLGAIELGKWVHLFAEKNEIEIDDVLGSALIDMYSKCGSIDKAVQVFEGIRN 319
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGME 194
+ + WS++I HG+ +A++ F +M+Q +DV ++ +L ACSH GL E+G
Sbjct: 320 KKNPITWSAIIGGLAMHGRARDALDHFWRMQQAGVTPSDVVYIGVLSACSHAGLVEEGRS 379
Query: 195 FFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
+ MV PR+EHY C+VDLLGR G L+EA LI NMPVK + +I K LL ACK H
Sbjct: 380 IYYHMVNIVGLLPRIEHYGCMVDLLGRAGCLEEAEQLILNMPVKPDDVILKALLGACKMH 439
Query: 255 KSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSW 314
+ +M RIA+ ++G P D+ YV LSN+ AS W+GV + R M+E +++K+PG SW
Sbjct: 440 GNIEMGERIAKILMGWYPHDSGSYVALSNMFASEGNWEGVVKVRLKMKELDIRKDPGCSW 499
Query: 315 LEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLK 374
+E+ +H+F + D SHPR+ I LEE++ ++ GY P+T + +MD +EK+ L
Sbjct: 500 IELDGVIHEFLVEDDSHPRAEGIHSMLEEMSDRLRSVGYRPNTTQVLLNMDEKEKQSALH 559
Query: 375 HHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREIIVRDASR 415
+HSEK+AIAF GLI P K +S+I NR+IIVRD R
Sbjct: 560 YHSEKIAIAF-----GLISTRPQTPLQIVKNLRVCEDCHSSIKLVSKIYNRKIIVRDRKR 614
Query: 416 FHHFRNGKCSCGDYW 430
FHHF NG CSC DYW
Sbjct: 615 FHHFENGSCSCMDYW 629
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 110/249 (44%), Gaps = 39/249 (15%)
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P+K TF V+ +C++LA + +G+Q+H VVK G D V S+L+ +Y CG + D+
Sbjct: 121 PNKFTFPCVLKACAKLARIEEGKQLHGFVVKLGLVSDEFVRSNLVRVYVMCGAMKDAHVL 180
Query: 130 FLECEY-SDVVLWSSMIAAY-------------------------------GFHGKGEEA 157
F + +VVLW+ MI Y +G +EA
Sbjct: 181 FYQTRLEGNVVLWNVMIDGYVRMGDLRASRELFDSMPNKSVVSWNVMISGCAQNGHFKEA 240
Query: 158 INLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVD 217
I +F M+ + N VT VS+L A S G E G ++ L +K + + ++D
Sbjct: 241 IEMFHDMQLGDVPPNYVTLVSVLPAVSRLGAIELG-KWVHLFAEKNEIEIDDVLGSALID 299
Query: 218 LLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH----KSTDMAGRIAEEILGVNPQ 273
+ +CG +D+A + + K N I W ++ H + D R+ + GV P
Sbjct: 300 MYSKCGSIDKAVQVFEGIRNKKNPITWSAIIGGLAMHGRARDALDHFWRMQQA--GVTPS 357
Query: 274 DAAPYVLLS 282
D +LS
Sbjct: 358 DVVYIGVLS 366
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 78/157 (49%), Gaps = 3/157 (1%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIR-LMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
E+D V GS+L MY K GS+ + +V + +N I W +I G A +G A D LD +
Sbjct: 287 IEIDDVLGSALIDMYSKCGSIDKAVQVFEGIRNKKNPITWSAIIGGLAMHGRARDALDHF 346
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVK-AGASLDVGVISSLISMYSR 119
M+ G P + ++ V+S+CS + +G+ I+ +V G + ++ + R
Sbjct: 347 WRMQQAGVTPSDVVYIGVLSACSHAGLVEEGRSIYYHMVNIVGLLPRIEHYGCMVDLLGR 406
Query: 120 CGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGE 155
GCL+++ + L D V+ +++ A HG E
Sbjct: 407 AGCLEEAEQLILNMPVKPDDVILKALLGACKMHGNIE 443
>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 840
Score = 328 bits (841), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 175/451 (38%), Positives = 265/451 (58%), Gaps = 26/451 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
+E + GSSL MY K G + E V +P R+V++ +I+G AQ GL E+ L+ +
Sbjct: 395 NYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELF 454
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
++ G + + +T+ V+++ S LA L G+Q+H V+++ V + +SLI MYS+C
Sbjct: 455 RRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKC 514
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM-EQKEFEANDVTFVSL 179
G L S + F V+ W++M+ Y HG+G E + LF M E+ + + + VT +++
Sbjct: 515 GNLTYSRRIFDTMYERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAV 574
Query: 180 LYACSHCGLKEKGMEFF-DLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
L CSH GL++KG+ F D+ K +P++EHY CVVDLLGR G ++EA I+ MP +
Sbjct: 575 LSGCSHGGLEDKGLNIFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFE 634
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
A IW +LL AC+ H + D+ +++L + P +A YV+LSN++ASA RW+ VS R
Sbjct: 635 PTAAIWGSLLGACRVHSNVDIGEFAGQQLLEIEPGNAGNYVILSNLYASAGRWEDVSSLR 694
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
+ M ++ V KEPG S +E+ +H F D+SHPR EI + ++EL++ K GYVPD
Sbjct: 695 DLMLKKTVTKEPGRSSIELDQVLHTFHASDRSHPRREEICMKVKELSTSFKEVGYVPDLS 754
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLI---VMLPF----------------KY 399
+HD+D E+KE L HSEKLA++F GLI +P KY
Sbjct: 755 CVLHDVDEEQKEKILLGHSEKLALSF-----GLIASPASVPIRVIKNLRICVDCHNFAKY 809
Query: 400 ISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
IS++ RE+ +RD +RFH GKCSC DYW
Sbjct: 810 ISKVYGREVSLRDKNRFHRIVGGKCSCEDYW 840
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 123/268 (45%), Gaps = 37/268 (13%)
Query: 15 MYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY-------------- 60
+Y K SL + V MP RNV++W +I+ +Q G A L+ +
Sbjct: 287 LYTKCDSLGDAHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAI 346
Query: 61 ------NLMR-MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSL 113
N R V P++ TF +V++SC+ G+QIH+ ++K V V SSL
Sbjct: 347 DKLKLSNPNRPWVCTEPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSL 406
Query: 114 ISMYSRCGCLDDSVKTFLEC-EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEAN 172
+ MY++ G + ++ +T EC DVV +++I+ Y G EEA+ LF +++ + ++N
Sbjct: 407 LDMYAKDGKIHEA-RTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSN 465
Query: 173 DVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVV------DLLGRCGYLD 226
VT+ +L A S G+ DL + + R E + VV D+ +CG L
Sbjct: 466 YVTYTGVLTALS-------GLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLT 518
Query: 227 EAAALIRNMPVKANAIIWKTLLSACKTH 254
+ + M + I W +L H
Sbjct: 519 YSRRIFDTM-YERTVISWNAMLVGYSKH 545
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 93/206 (45%), Gaps = 26/206 (12%)
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M + GF + ++++ C +GQ++HA ++K V + + LI +Y++C
Sbjct: 234 MALHGFNMKFENYNAILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDS 293
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLF--------------EQMEQKE 168
L D+ F E +VV W++MI+AY G +A+NLF ++++
Sbjct: 294 LGDAHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSN 353
Query: 169 -------FEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGR 221
E N+ TF ++L +C+ G + L++ K + + + ++D+ +
Sbjct: 354 PNRPWVCTEPNEFTFATVLTSCTSSLGFILGRQIHSLII-KLNYEDHVFVGSSLLDMYAK 412
Query: 222 CGYLDEAAALIRNMP----VKANAII 243
G + EA + +P V AII
Sbjct: 413 DGKIHEARTVFECLPERDVVSCTAII 438
>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
Length = 604
Score = 328 bits (840), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 175/450 (38%), Positives = 257/450 (57%), Gaps = 25/450 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G ++ +L +MY + + V M ++++ +I G A++ + L +
Sbjct: 160 GLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLF 219
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
++ P +T +SVI SC+ L L G+ IH V K G V V ++LI M+++C
Sbjct: 220 RELQASNIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKC 279
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L D++ F D WS+MI A+ HG G +AI++FE+M+++ +++TF+ LL
Sbjct: 280 GSLTDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLL 339
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
YACSH GL E+G +F M K Y P ++HY C+VDLLGR G+LDEA + + +KA
Sbjct: 340 YACSHAGLVEQGRGYFYSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKAT 399
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
I+W+TLLSAC TH + +MA R+ E I ++ YV+LSN++A RW+ V+ R+
Sbjct: 400 PILWRTLLSACSTHGNVEMAKRVIERIFELDDAHGGDYVILSNLYARVGRWEDVNHLRKL 459
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M++R V K PG S +E+ N VH+F GD H S+E+ L+EL E+KL GYVPDT
Sbjct: 460 MKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHCVSVELRRALDELMKEIKLVGYVPDTSLV 519
Query: 361 MH-DMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYI 400
H DM+ E KE L++HSEKLA+AF GL+ P K I
Sbjct: 520 YHADMEEEGKELVLRYHSEKLAMAF-----GLLNTPPGTTIRVAKNLRICGDCHNAAKLI 574
Query: 401 SEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
S I R+I++RD RFH F +GKCSCGD+W
Sbjct: 575 SFIFGRKIVIRDVQRFHRFEDGKCSCGDFW 604
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 131/284 (46%), Gaps = 14/284 (4%)
Query: 35 RNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQI 94
+++I + + G A++ + + G PD TF S++ +C+ L +G +
Sbjct: 93 KDIILFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSKALREGMGL 152
Query: 95 HAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKG 154
H VK G + ++ + +LI+MY+ C ++ + F E E +V ++++I Y +
Sbjct: 153 HCFAVKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSSQP 212
Query: 155 EEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY-- 212
EA++LF +++ E DVT +S++ +C+ G + G + +Y +K + Y
Sbjct: 213 NEALSLFRELQASNIEPTDVTMLSVIMSCALLGALDLGK-----WIHEYVKKKGFDKYVK 267
Query: 213 --TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL-- 268
T ++D+ +CG L +A ++ M V+ + W ++ A TH A + EE+
Sbjct: 268 VNTALIDMFAKCGSLTDAISIFEGMRVR-DTQAWSAMIVAFATHGDGLKAISMFEEMKRE 326
Query: 269 GVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGV 312
GV P + LL + QG F + + PG+
Sbjct: 327 GVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKTYGIT--PGI 368
>gi|302805077|ref|XP_002984290.1| hypothetical protein SELMODRAFT_119978 [Selaginella moellendorffii]
gi|300148139|gb|EFJ14800.1| hypothetical protein SELMODRAFT_119978 [Selaginella moellendorffii]
Length = 448
Score = 328 bits (840), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 172/449 (38%), Positives = 260/449 (57%), Gaps = 25/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E + V G+SL +MY + SL V +P ++ I W ++ AQ+G ++ L+ +
Sbjct: 6 GLEAETVVGTSLVNMYGRCHSLGNARLVFERIPCKDAITWNAIVTAYAQDGYGKEALEIF 65
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G + TF+SV+ +C+ + L G+ IH +V G ++ V ++L++MY++C
Sbjct: 66 QRMQQEGVKTGSATFISVLEACASTSALALGRVIHQNLVANGLDRELIVATALVNMYAKC 125
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L ++ + F + E DVV W++++A HG EE+ +L +ME + + N+VTF+SL+
Sbjct: 126 GKLVEAREVFDQMEGMDVVAWTAIVAGSAQHGHIEESKDLMRRMELEGIKPNNVTFLSLV 185
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
+ACSH G ++ + F M + P EH+ CV+DLLGR G L+EA +I MP +
Sbjct: 186 FACSHSGYLDEARDCFIAMAD-HGFFPLPEHFRCVIDLLGRGGRLEEAQEVIDTMPFEPG 244
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
W T+LSAC+ K A AE+ + P + Y+L+SN++A+ +RW V + R
Sbjct: 245 LTAWLTMLSACRLQKDVLRAEIAAEKCYEIEPTRPSAYLLMSNLYAALERWDDVKKVRRL 304
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M R VKKEPG+S +E+KN++H+F +KSHP+ I L +LT E+K GYVPDT
Sbjct: 305 MERRGVKKEPGLSCIEVKNRLHEFGAANKSHPQKDLIYEELRKLTLEIKEAGYVPDTSLV 364
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
+H++D E K+ L HHSE+LA+ + GLI P FKYIS
Sbjct: 365 LHNVDEETKQATLFHHSERLAVVY-----GLINTPPGTSLCVVNNLRMCSDCHTAFKYIS 419
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
I NREI+VRDA+RFH F G CSC DYW
Sbjct: 420 TISNREIVVRDANRFHTFATGGCSCKDYW 448
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 88/181 (48%), Gaps = 8/181 (4%)
Query: 98 VVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEA 157
V K G + V +SL++MY RC L ++ F D + W++++ AY G G+EA
Sbjct: 2 VEKVGLEAETVVGTSLVNMYGRCHSLGNARLVFERIPCKDAITWNAIVTAYAQDGYGKEA 61
Query: 158 INLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVD 217
+ +F++M+Q+ + TF+S+L AC+ G +V + L T +V+
Sbjct: 62 LEIFQRMQQEGVKTGSATFISVLEACASTSALALGRVIHQNLVANGLDR-ELIVATALVN 120
Query: 218 LLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH----KSTDMAGRIAEEILGVNPQ 273
+ +CG L EA + M + + W +++ H +S D+ R+ E+ G+ P
Sbjct: 121 MYAKCGKLVEAREVFDQME-GMDVVAWTAIVAGSAQHGHIEESKDLMRRM--ELEGIKPN 177
Query: 274 D 274
+
Sbjct: 178 N 178
>gi|357507741|ref|XP_003624159.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87162577|gb|ABD28372.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499174|gb|AES80377.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 755
Score = 328 bits (840), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 175/460 (38%), Positives = 258/460 (56%), Gaps = 30/460 (6%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIR----------------NVIAWITLI 44
G D SSL MY K G + + +++ +P+ +++W +++
Sbjct: 296 GLNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVSWSSMV 355
Query: 45 AGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGAS 104
+G NG ED + + M D T ++IS+C+ L G+QIHA + K G
Sbjct: 356 SGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGILEFGKQIHAYIQKIGLR 415
Query: 105 LDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM 164
+D V SSLI MYS+ G LDD++ F + + +VVLW+SMI+ HG+G+EAI+LFE M
Sbjct: 416 IDAYVGSSLIDMYSKSGSLDDALMIFEQIKEPNVVLWTSMISGCALHGQGKEAISLFEGM 475
Query: 165 EQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGY 224
N+VTFV +L ACSH GL E+G +F +M Y P +EHYT +V+L GR G+
Sbjct: 476 LNLGIIPNEVTFVGVLNACSHVGLIEEGCRYFRMMKDTYHINPEVEHYTSMVNLYGRAGH 535
Query: 225 LDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNI 284
L EA I + +W++ LS+C+ HK+ +M ++E +L P D Y+LLSN+
Sbjct: 536 LIEAKNFIFENSISHFTSVWRSFLSSCRLHKNFNMGKSVSEMLLQSAPSDPDAYILLSNM 595
Query: 285 HASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEEL 344
+S +W + R M +R VKK+PG SW+++K+Q+H FT+GD+SHP+ EI YL+ L
Sbjct: 596 CSSNHQWDEAAIVRSLMYQRGVKKQPGQSWVQLKDQIHSFTVGDRSHPQDKEIYSYLDSL 655
Query: 345 TSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFA---EHTRGLIVMLP----- 396
+K GY D M D++ E+ E + HHSEKLA+ F+ R I ++
Sbjct: 656 IGRLKEIGYSLDAKLVMQDVEEEQGEVLISHHSEKLALVFSIINTSPRTPIRIMKNLRIC 715
Query: 397 ------FKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
FKY S++ REIIVRD RFHHF+ CSCG+YW
Sbjct: 716 NDCHNFFKYASQLLEREIIVRDTHRFHHFKQSSCSCGEYW 755
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 144/296 (48%), Gaps = 28/296 (9%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E D+V+ + + Y++ G + + ++ R P ++V++W T+I G Q G L+Q
Sbjct: 197 EKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDVVSWNTIIDGLIQCGYERLALEQLYC 256
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M G +TF + S L+ + G+Q+H V+ G + D + SSL+ MY +CG
Sbjct: 257 MVAHGTEFSPVTFSIALILVSSLSLVEVGRQLHGRVLTFGLNSDGYIRSSLVEMYGKCGR 316
Query: 123 LD-------DSVKTFLE-------CE--YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQ 166
+D D FL C+ + +V WSSM++ Y ++GK E+ + F M
Sbjct: 317 MDKASTILKDVPLNFLRKGNFGVTCKEPKARMVSWSSMVSGYVWNGKYEDGMKTFRSMVC 376
Query: 167 KEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKP--RLEHY--TCVVDLLGRC 222
+ + T +++ AC++ G+ E G + + Y +K R++ Y + ++D+ +
Sbjct: 377 ELIVVDIRTVATIISACANAGILEFGKQ-----IHAYIQKIGLRIDAYVGSSLIDMYSKS 431
Query: 223 GYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAA 276
G LD+A + + + N ++W +++S C H A + E + LG+ P +
Sbjct: 432 GSLDDALMIFEQIK-EPNVVLWTSMISGCALHGQGKEAISLFEGMLNLGIIPNEVT 486
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 124/298 (41%), Gaps = 60/298 (20%)
Query: 6 LVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQN-GLAEDVLDQYNLMR 64
L + + L +Y+KS +L K+ + +N W LI+G A+ G +E V + M+
Sbjct: 67 LNSANYLLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARAAGSSELVFSLFREMQ 126
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G P++ T SV+ CS + G+ IHA +++ G DV + +S++ +Y +C +
Sbjct: 127 ADGACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLENSILDLYLKCKEFE 186
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEF--------------- 169
+ F DVV W+ MI AY G E+++ +F K+
Sbjct: 187 YAESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDVVSWNTIIDGLIQCGY 246
Query: 170 ----------------EANDVTFVSLLYACSHCGLKEKGMEF------FDLMVKKYRRKP 207
E + VTF L S L E G + F L Y R
Sbjct: 247 ERLALEQLYCMVAHGTEFSPVTFSIALILVSSLSLVEVGRQLHGRVLTFGLNSDGYIRSS 306
Query: 208 RLEHYTCVVDLLGRCGYLDEAAALIRNMPV---------------KANAIIWKTLLSA 250
+E Y G+CG +D+A+ +++++P+ KA + W +++S
Sbjct: 307 LVEMY-------GKCGRMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVSWSSMVSG 357
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 328 bits (840), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 169/444 (38%), Positives = 255/444 (57%), Gaps = 27/444 (6%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ DL G++L +Y + G + E + ++ ++W +L++G AQ+G E+ L+ +
Sbjct: 569 GYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIF 628
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G + TF S +S+ + +A + G+QIH + K G + V ++LI++Y++C
Sbjct: 629 AQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKC 688
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +DD + W+SMI Y HG G EA+ LFE M+Q + N VTFV +L
Sbjct: 689 GTIDD-------------ISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVL 735
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL ++G+ +F M + + P+ EHY CVVDLLGR G L A + MP++ +
Sbjct: 736 SACSHVGLVDEGISYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMPIQPD 795
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A++W+TLLSAC HK+ D+ A +L + P+D+A YVL+SN++A + +W R+
Sbjct: 796 AMVWRTLLSACNVHKNIDIGEFAASHLLELEPKDSATYVLVSNMYAVSGKWDCRDRTRQM 855
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M++R VKKEPG SW+E+ N VH F GD++HPR+ I YL L GYVP +
Sbjct: 856 MKDRGVKKEPGRSWVEVDNSVHAFFAGDQNHPRADMIYEYLRGLDFRAAENGYVPRCNSL 915
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA----EHTRGLIVMLPF----------KYISEIKNR 406
+ D + +K+ HSE+LAIAF + L V K++S+I +R
Sbjct: 916 LSDAEIRQKDPTEIIHSERLAIAFGLLSLTSSTPLYVFKNLRVCEDCHNWIKHVSKITDR 975
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
IIVRD+ RFHHF+ G CSC DYW
Sbjct: 976 VIIVRDSYRFHHFKVGSCSCKDYW 999
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 150/312 (48%), Gaps = 17/312 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ ++ S L MY K G L K+ R + +V++W +IAG Q+ + L+ +
Sbjct: 468 GFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLF 527
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G + D I F S IS+C+ + L QG+QIHA+ +G S D+ + ++L+S+Y+RC
Sbjct: 528 KEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARC 587
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + ++ F + D V W+S+++ + G EEA+N+F QM + E N TF S +
Sbjct: 588 GKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAV 647
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
A ++ G + M++K E ++ L +CG +D+
Sbjct: 648 SAAANIANVRIGKQIHG-MIRKTGYDSETEVSNALITLYAKCGTIDD------------- 693
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
I W ++++ H A ++ E++ L V P +LS +G+S FR
Sbjct: 694 -ISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGISYFR 752
Query: 299 EAMRERNVKKEP 310
N+ +P
Sbjct: 753 SMSEAHNLVPKP 764
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 108/198 (54%), Gaps = 16/198 (8%)
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ M++ G P++ T+ S++ +C+ L G+QIH +V+K G +V V S LI MY++
Sbjct: 426 FTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAK 485
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G LD ++K F + +DVV W++MIA Y H K EA+NLF++M+ + +++++ F S
Sbjct: 486 HGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASA 545
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYT-------CVVDLLGRCGYLDEAAALI 232
+ AC+ ++G ++ + L Y+ +V L RCG + EA A
Sbjct: 546 ISACAGIQALDQG--------RQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAF 597
Query: 233 RNMPVKANAIIWKTLLSA 250
+ K N + W +L+S
Sbjct: 598 DQIYAKDN-VSWNSLVSG 614
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 133/295 (45%), Gaps = 40/295 (13%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE + L +Y K+G L +KV + R+ ++W+ +I+G +QNG E+ + +
Sbjct: 194 GFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLF 253
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ V+S+C+++ G+Q+H V+K G S + V ++L+++YSR
Sbjct: 254 CQI--------------VLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRS 299
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L + + F D V ++S+I+ G A+ LF++M + + VT SLL
Sbjct: 300 GNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLL 359
Query: 181 YACSHCGLKEKGMEF-------------------FDLMVKKYRRKPRLEHYTCVVDLLGR 221
AC+ G G +F DL VK K E + C G+
Sbjct: 360 SACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLC----YGQ 415
Query: 222 CGYLDEAAALIRNMPVKA---NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQ 273
L+++ + M ++ N + ++L C T +TD+ +I ++L Q
Sbjct: 416 LDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQ 470
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 124/268 (46%), Gaps = 19/268 (7%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF + ++L +Y +SG+L E++ M R+ +++ +LI+G AQ G L +
Sbjct: 281 GFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALF 340
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M + +PD +T S++S+C+ + L G+Q H+ +KAG + D+ V SL+ +Y +C
Sbjct: 341 KKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKC 400
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
SD+ YG ++ +F QM+ + N T+ S+L
Sbjct: 401 ---------------SDIKTAHEFFLCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSIL 445
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
C+ G + G E V K + + + ++D+ + G LD A + R + K N
Sbjct: 446 KTCTTLGATDLG-EQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRL--KEN 502
Query: 241 AII-WKTLLSACKTHKSTDMAGRIAEEI 267
++ W +++ H A + +E+
Sbjct: 503 DVVSWTAMIAGYTQHDKFTEALNLFKEM 530
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 108/279 (38%), Gaps = 48/279 (17%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G L Y+ G L V MPIR++ W + L V + M
Sbjct: 100 GLKLIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNV 159
Query: 69 RPDKITFVSVISSCSELA-TLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV 127
D+ F V+ CS A + +QIHA+ + +G + + LI +Y + G L +
Sbjct: 160 EFDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAK 219
Query: 128 KTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCG 187
K F + D V W +MI+ +G EEA+ LF Q+ +L AC+
Sbjct: 220 KVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI--------------VLSACTKVE 265
Query: 188 LKEKGMEFFDLMVKK---------------YRRKPRLE---------------HYTCVVD 217
E G + L++K+ Y R L Y ++
Sbjct: 266 FFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLIS 325
Query: 218 LLGRCGYLDEAAALIRNMPV---KANAIIWKTLLSACKT 253
L + GY++ A AL + M + K + + +LLSAC +
Sbjct: 326 GLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACAS 364
>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 328 bits (840), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 169/436 (38%), Positives = 258/436 (59%), Gaps = 15/436 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ ++ GS+L +Y + G + + + V + RN ++W LIAG A+ E L+ +
Sbjct: 191 GFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELF 250
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M GFRP ++ S+ +CS L QG+ +HA ++K+G L ++L+ MY++
Sbjct: 251 QGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKS 310
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + D+ K F DVV W+S++ AY HG G+EA+ FE+M + N+++F+S+L
Sbjct: 311 GSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVL 370
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL ++G +++LM KK P HY VVDLLGR G L+ A I MP++
Sbjct: 371 TACSHSGLLDEGWHYYELM-KKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPT 429
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A IWK LL+AC+ HK+T++ AE + ++P D P+V+L NI+AS RW + R+
Sbjct: 430 AAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKK 489
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+E VKKEP SW+EI+N +H F D+ HP+ EI EE+ +++K GYVPDT
Sbjct: 490 MKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHV 549
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAE---------HTRGLIVM-----LPFKYISEIKNR 406
+ +D +E+E NL++HSEK+A+AFA H + I + K S++ R
Sbjct: 550 IVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGR 609
Query: 407 EIIVRDASRFHHFRNG 422
EIIVRD +RFHHF++
Sbjct: 610 EIIVRDTNRFHHFKDA 625
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 139/275 (50%), Gaps = 4/275 (1%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F D+V G++L +MY K GSL E KV MP R+ + W TLI+G +Q+ D L +N
Sbjct: 91 FRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFN 150
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M G+ P++ T SVI + + G Q+H VK G +V V S+L+ +Y+R G
Sbjct: 151 QMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYG 210
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+DD+ F E + V W+++IA + E+A+ LF+ M + F + ++ SL
Sbjct: 211 LMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFG 270
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
ACS G E+G M+K + T ++D+ + G + +A + + K +
Sbjct: 271 ACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNT-LLDMYAKSGSIHDARKIFDRL-AKRDV 328
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQD 274
+ W +LL+A H A EE+ +G+ P +
Sbjct: 329 VSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNE 363
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 102/209 (48%), Gaps = 14/209 (6%)
Query: 71 DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTF 130
D+ + +++ C+ L QG+ +HA ++++ D+ + ++L++MY++CG L+++ K F
Sbjct: 59 DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118
Query: 131 LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH----- 185
+ D V W+++I+ Y H + +A+ F QM + + N+ T S++ A +
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC 178
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
CG + G K + + ++DL R G +D+A + + + N + W
Sbjct: 179 CGHQLHG------FCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESR-NDVSWN 231
Query: 246 TLLSACKTHKSTDMAGRIAEEIL--GVNP 272
L++ T+ A + + +L G P
Sbjct: 232 ALIAGHARRSGTEKALELFQGMLRDGFRP 260
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 328 bits (840), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 164/446 (36%), Positives = 262/446 (58%), Gaps = 24/446 (5%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
LDL++ +S+ Y++ GS+ + E + MP ++V++W +I+G AQ+ + L + M
Sbjct: 335 LDLISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEM 394
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
++ G RPD+ VS IS+C+ LATL G+ IHA + + ++V + ++LI MY +CGC+
Sbjct: 395 QLHGVRPDETALVSAISACTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCV 454
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
+++++ F E V W+++I +G E+++N+F M++ N++TF+ +L AC
Sbjct: 455 ENALEVFYAMEEKGVSTWNAVILGLAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGAC 514
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
H GL G +F+ M+ +++ + ++HY C+VDLLGR G L EA LI +MP+ +
Sbjct: 515 RHMGLVNDGRHYFNSMIHEHKIEANIKHYGCMVDLLGRAGLLKEAEELIDSMPMAPDVAT 574
Query: 244 WKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
W LL AC+ H+ +M R+ +++ + P +VLLSNI+AS W V E R M +
Sbjct: 575 WGALLGACRKHRDNEMGERLGRKLIQLQPDHDGFHVLLSNIYASKGNWGNVLEIRGIMAQ 634
Query: 304 RNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHD 363
V K PG S +E VH+F GDK+HP+ +I+ L+ + +++K+ GYVP T D
Sbjct: 635 HGVVKTPGCSMIEANGTVHEFLAGDKTHPQINDIEHMLDVVAAKLKIEGYVPTTSEVSLD 694
Query: 364 MDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIK 404
+D EEKE L HSEKLA+AF GLI + P K IS+
Sbjct: 695 IDEEEKETALFRHSEKLAVAF-----GLITISPPTPIRVTKNLRICNDCHTVVKLISKAF 749
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
+R+I+VRD RFHHF++G CSC D+W
Sbjct: 750 DRDIVVRDRHRFHHFKHGACSCMDFW 775
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 129/309 (41%), Gaps = 70/309 (22%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIA------------------------ 39
LDLV+ ++L Y+++G + E E+V MP RN IA
Sbjct: 169 LDLVSWNTLLAGYVQAGEVEEAERVFEGMPERNTIASNSMIALFGRKGCVEKARRIFNGV 228
Query: 40 ---------WITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQ 90
W +++ QN + E+ L + M+ G D++ VS +S+CS + +
Sbjct: 229 RGRERDMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEM 288
Query: 91 GQQIHAEVVKAGAS--------------------------------LDVGVISSLISMYS 118
G+ +H VK G LD+ +S+IS Y
Sbjct: 289 GRWVHGLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYL 348
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
RCG + D+ F DVV WS+MI+ Y H EA+ LF++M+ ++ VS
Sbjct: 349 RCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVS 408
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+ AC+H + G ++ + + + + + T ++D+ +CG ++ A + M K
Sbjct: 409 AISACTHLATLDLG-KWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEK 467
Query: 239 A----NAII 243
NA+I
Sbjct: 468 GVSTWNAVI 476
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 10/202 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRL---MPIRNVIAWITLIAGKA--QNGLAED 55
G D A S L + S +LV +R+ + N W T++ QN +
Sbjct: 30 GLITDPYAASRLINFSSHSTTLVPFHYSLRIFNHLRNPNTFTWNTIMRAHLYLQNSPHQA 89
Query: 56 VLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLIS 115
+L Y L +PD T+ ++ C+ + +G+Q+HA V +G DV V ++L++
Sbjct: 90 LL-HYKLFLASHAKPDSYTYPILLQCCAARVSEFEGRQLHAHAVSSGFDGDVYVRNTLMN 148
Query: 116 MYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVT 175
+Y+ CG + + + F E D+V W++++A Y G+ EEA +FE M ++ N +
Sbjct: 149 LYAVCGSVGSARRVFEESPVLDLVSWNTLLAGYVQAGEVEEAERVFEGMPER----NTIA 204
Query: 176 FVSLLYACSHCGLKEKGMEFFD 197
S++ G EK F+
Sbjct: 205 SNSMIALFGRKGCVEKARRIFN 226
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 78/171 (45%), Gaps = 10/171 (5%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
+++++ ++L MYMK G + +V M + V W +I G A NG E L+ +
Sbjct: 434 LQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGVSTWNAVILGLAMNGSVEQSLNMFA 493
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQ-----IHAEVVKAGASLDVGVISSLISM 116
M+ G P++ITF+ V+ +C + + G+ IH ++A ++ ++ +
Sbjct: 494 DMKKTGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEA----NIKHYGCMVDL 549
Query: 117 YSRCGCLDDSVKTFLECEYS-DVVLWSSMIAAYGFHGKGEEAINLFEQMEQ 166
R G L ++ + + DV W +++ A H E L ++ Q
Sbjct: 550 LGRAGLLKEAEELIDSMPMAPDVATWGALLGACRKHRDNEMGERLGRKLIQ 600
>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
Length = 1166
Score = 328 bits (840), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 165/446 (36%), Positives = 258/446 (57%), Gaps = 26/446 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE D +SL MY K G L + + ++ I W ++A A +G E+ L +
Sbjct: 631 GFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIF 690
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
MR VG D+ +F +++ + LA L +GQQ+H V+K G D+ V ++ + MY +C
Sbjct: 691 GEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKC 750
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + D +K + + W+ +I+A+ HG ++A F +M + + + VTFVSLL
Sbjct: 751 GEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLL 810
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+H GL ++G+ ++D M +++ P +EH C++DLLGR G L A I+ MPV N
Sbjct: 811 SACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPN 870
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+ W++LL+AC+ H + ++A + AE +L ++P D + YVL SN+ A++ +W+ V R+
Sbjct: 871 DLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKE 930
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M N+KK+P SW+++K++VH F MG+K HP++ I L EL K GYVPDT
Sbjct: 931 MGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKEAGYVPDTSFA 990
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP--------------------FKYI 400
+HDMD E+KEYNL +HSE+LA+AF ++ P +K++
Sbjct: 991 LHDMDEEQKEYNLWNHSERLALAFG------LINTPESSTLRIFKNLRVCGDCHSVYKFV 1044
Query: 401 SEIKNREIIVRDASRFHHFRNGKCSC 426
S I R+I++RD RFHHF GKCSC
Sbjct: 1045 SGIVGRKIVLRDPYRFHHFSGGKCSC 1070
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 156/315 (49%), Gaps = 7/315 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF L+ G++L MY K G ++E +KV++ MP + + W LI G A+N + + Y
Sbjct: 529 GFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAY 588
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATL-GQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
L+R G + IT VSV+ +CS L G IHA +V G D V +SLI+MY++
Sbjct: 589 KLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAK 648
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG L+ S F + W++M+AA HG GEEA+ +F +M + +F
Sbjct: 649 CGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGG 708
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L A ++ + E+G + L++ K + L +D+ G+CG + + ++ P+
Sbjct: 709 LAATANLAVLEEGQQLHGLVI-KLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQ-PINR 766
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQ-DAAPYV-LLSNIHASAKRWQGVSEF 297
+ + W L+SA H A E+L + P+ D +V LLS + +G++ +
Sbjct: 767 SRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYY 826
Query: 298 REAMRERNVKKEPGV 312
RE V PG+
Sbjct: 827 DSMTREFGVF--PGI 839
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 88/171 (51%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ G++L H Y G + +K+ MP NV++W +L+ G + +G +VL+ Y MR
Sbjct: 230 DVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMR 289
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G ++ TF +V SSC L G Q+ +++ G V V +SLISM+S ++
Sbjct: 290 QEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVE 349
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVT 175
++ F D++ W++MI+AY HG E++ F M E N T
Sbjct: 350 EACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTT 400
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 125/255 (49%), Gaps = 7/255 (2%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
L + ++L +MY K G++ V M RN +W T+++G + GL E+ + +
Sbjct: 126 NLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQ 185
Query: 63 MRMVGFRPDKITFVSVISSCSELATLG-QGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M +G P+ S+I++CS + +G Q+H VVK G DV V ++L+ Y G
Sbjct: 186 MWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIG 245
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+ ++ K F E +VV W+S++ Y G E +N++++M Q+ N TF ++
Sbjct: 246 LVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVT- 304
Query: 182 ACSHCGLKEKGMEFFDLM--VKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
S CGL E + + ++ + +Y + + ++ + ++EA + +M +
Sbjct: 305 --SSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMN-EC 361
Query: 240 NAIIWKTLLSACKTH 254
+ I W ++SA H
Sbjct: 362 DIISWNAMISAYAHH 376
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 140/275 (50%), Gaps = 7/275 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + ++ ++L +Y ++G + E V + M R++I+W +++A Q+G D L
Sbjct: 428 GLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKIL 487
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ +G + +TF S +++CS L + + +HA ++ AG + V ++L++MY +
Sbjct: 488 AELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKL 547
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + ++ K D V W+++I + + + EA+ ++ + +K AN +T VS+L
Sbjct: 548 GMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVL 607
Query: 181 YACSHC-GLKEKGMEFF-DLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
ACS L + GM +++ + +++ ++ + +CG L+ + + + K
Sbjct: 608 GACSAPDDLLKHGMPIHAHIVLTGFESDDYVKN--SLITMYAKCGDLNSSNYIFDGLGNK 665
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEI--LGVN 271
+ I W +++A H + A +I E+ +GVN
Sbjct: 666 S-PITWNAMVAANAHHGCGEEALKIFGEMRNVGVN 699
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 124/259 (47%), Gaps = 20/259 (7%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE + +SL M+ S+ E V M ++I+W +I+ A +GL + L +
Sbjct: 327 GFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCF 386
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ MR + + T S++S CS + L G+ IH VVK G +V + ++L+++YS
Sbjct: 387 HWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEA 446
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +D+ F D++ W+SM+A Y GK + + + ++ Q N VTF S L
Sbjct: 447 GRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASAL 506
Query: 181 YACSH--CGLKEKGME-------FFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAAL 231
ACS+ C ++ K + F D ++ +V + G+ G + EA +
Sbjct: 507 AACSNPECLIESKIVHALIIVAGFHDFLIVG----------NALVTMYGKLGMMMEAKKV 556
Query: 232 IRNMPVKANAIIWKTLLSA 250
++ MP + + + W L+
Sbjct: 557 LQTMP-QPDRVTWNALIGG 574
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 3/167 (1%)
Query: 83 SELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWS 142
SE+ + G+ +HA + +L + ++LI+MYS+ G ++ + F E + + WS
Sbjct: 105 SEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWS 164
Query: 143 SMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCG-LKEKGMEFFDLMVK 201
+M++ Y G EEA+ LF QM E N SL+ ACS G + ++G + +VK
Sbjct: 165 TMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVK 224
Query: 202 KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
+ T +V G G + A L MP N + W +L+
Sbjct: 225 T-GILGDVYVGTALVHFYGSIGLVYNAQKLFEEMP-DHNVVSWTSLM 269
>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Vitis vinifera]
Length = 751
Score = 328 bits (840), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 177/445 (39%), Positives = 255/445 (57%), Gaps = 16/445 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E + + +SL MY + G + + KV + N + W ++I G QNG E L ++
Sbjct: 308 GLESAVASQTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVGLVQNGREEIALLKF 367
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M P+ T SV+ +CS LA L QG+QIHA V+K G +D V ++LI Y +C
Sbjct: 368 RQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKC 427
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + F DVV +SMI +Y +G G EA+ LF M+ E N+VT++ +L
Sbjct: 428 GSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVL 487
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC++ GL E+G F + +HY C+VDLLGR G L EA LI + + ++
Sbjct: 488 SACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNI-SD 546
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+IW+TLLSAC+ H +MA R+ ++ + P+D +VLLSN++AS W V E + A
Sbjct: 547 VVIWRTLLSACRIHGDVEMAKRVMNRVIDLAPEDGGTHVLLSNLYASTGNWSKVIEMKSA 606
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
MRE +KK P +SW++++ ++H F GD SHP +I LEEL ++K GYVPDT
Sbjct: 607 MREMRLKKNPAMSWVDVEREIHTFMAGDWSHPNFRDIREKLEELIEKVKELGYVPDTRFV 666
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA----EHTRGLIVMLP-----------FKYISEIKN 405
+ D+D E+K +L +HSEKLA+AFA + I +L K++S+I
Sbjct: 667 LQDLDEEKKIRSLYYHSEKLAVAFALWRSNYKNTTIRILKNLRVCGDCHTWMKFVSKIVG 726
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
R+II RD RFHHFRNG CSCGDYW
Sbjct: 727 RDIIARDVKRFHHFRNGLCSCGDYW 751
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 133/249 (53%), Gaps = 5/249 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF L G+ L Y+K GS+V KV +P R+++AW ++IA +NG +++ +D Y
Sbjct: 107 GFHHSL--GNKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIY 164
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASL-DVGVISSLISMYSR 119
M G PD+ TF SV + S+L + +GQ+ H + V G + +V V S+L+ MY++
Sbjct: 165 QRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAK 224
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G + D+ + DVVL++++I Y HG+ E++ +F M +K EAN+ T S+
Sbjct: 225 FGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSV 284
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L C + G L+VK + + T ++ + RCG +D++ + + +
Sbjct: 285 LVCCGNLEDLTSGRLIHGLIVKA-GLESAVASQTSLLTMYYRCGLVDDSLKVFKQF-INP 342
Query: 240 NAIIWKTLL 248
N + W +++
Sbjct: 343 NQVTWTSVI 351
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 120/250 (48%), Gaps = 17/250 (6%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
++ GS+L MY K G + + V + ++V+ + LI G + +G + L + M
Sbjct: 211 NVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMT 270
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G ++ T SV+ C L L G+ IH +VKAG V +SL++MY RCG +D
Sbjct: 271 KKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVD 330
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
DS+K F + + V W+S+I +G+ E A+ F QM + N T S+L ACS
Sbjct: 331 DSLKVFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACS 390
Query: 185 HCGLKEKGMEF------FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM--- 235
+ E+G + F L + KY ++D G+CG + A ++ +
Sbjct: 391 SLAMLEQGKQIHAIVMKFGLDIDKYVG-------AALIDFYGKCGSTEIARSVFNGLLEV 443
Query: 236 -PVKANAIIW 244
V N++I+
Sbjct: 444 DVVSVNSMIY 453
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 328 bits (840), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 167/444 (37%), Positives = 255/444 (57%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D + L Y K L + +V ++IA ++I +Q E + +
Sbjct: 434 GFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLF 493
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G PD S++++C+ L+ QG+Q+HA ++K D ++L+ Y++C
Sbjct: 494 MEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKC 553
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++D+ F VV WS+MI HG G+ A+ LF +M + N +T S+L
Sbjct: 554 GSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVL 613
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+H GL ++ +F+ M + + EHY+C++DLLGR G LD+A L+ +MP +AN
Sbjct: 614 CACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQAN 673
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A IW LL A + HK ++ AE++ + P+ + +VLL+N +ASA W V++ R+
Sbjct: 674 ASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKL 733
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M++ N+KKEP +SW+E+K++VH F +GDKSHP + EI L EL M G+VP+ D
Sbjct: 734 MKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKAGFVPNVDVD 793
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA----------EHTRGLIVM----LPFKYISEIKNR 406
+HD+D EKE L HHSE+LA+AFA + L + + FK+IS+I +R
Sbjct: 794 LHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHVAFKFISKIVSR 853
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EII+RD +RFHHFR+G CSCGDYW
Sbjct: 854 EIIIRDINRFHHFRDGTCSCGDYW 877
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 127/269 (47%), Gaps = 8/269 (2%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G L MY K+ L + KV M R++I LI+G + G ++ L + +R G
Sbjct: 341 GVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGL 400
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
++ T +V+ S + L +Q+HA VK G D V++ LI Y +C CL D+ +
Sbjct: 401 GVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANR 460
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F EC D++ +SMI A GE AI LF +M +K E + SLL AC+
Sbjct: 461 VFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSA 520
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
E+G + ++K+ +V +CG +++A ++P + + W ++
Sbjct: 521 YEQGKQVHAHLIKRQFMSDAFAG-NALVYTYAKCGSIEDAELAFSSLPERG-VVSWSAMI 578
Query: 249 SACKTH----KSTDMAGRIAEEILGVNPQ 273
H ++ ++ GR+ +E G+NP
Sbjct: 579 GGLAQHGHGKRALELFGRMVDE--GINPN 605
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 128/278 (46%), Gaps = 11/278 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPI-RNVIAWITLIAGKAQNGLAEDVLDQ 59
GF D+ ++L MY G + + +V RN ++W L++ +N D +
Sbjct: 130 GFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQV 189
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ M G +P + F V+++C+ + G+Q+HA VV+ G DV ++L+ MY +
Sbjct: 190 FGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMK 249
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G +D + F + SDVV W+++I+ +G AI L QM+ N T S+
Sbjct: 250 MGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSI 309
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV--VDLLGRCGYLDEAAALIRNMPV 237
L ACS G + G + M+K + Y V VD+ + +LD+A + M
Sbjct: 310 LKACSGAGAFDLGRQIHGFMIKA---NADSDDYIGVGLVDMYAKNHFLDDARKVFDWM-F 365
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRIAEEI----LGVN 271
+ I+ L+S C D A + E+ LGVN
Sbjct: 366 HRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVN 403
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 94/180 (52%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G++ D+ ++L MYMK G + + MP +V++W LI+G NG ++
Sbjct: 232 GYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELL 291
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G P+ T S++ +CS G+QIH ++KA A D + L+ MY++
Sbjct: 292 LQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKN 351
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
LDD+ K F + D++L +++I+ G+ +EA++LF ++ ++ N T ++L
Sbjct: 352 HFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVL 411
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 120/264 (45%), Gaps = 23/264 (8%)
Query: 6 LVAGSSLAHMYMKSGSLVE-----------------GEKVIRLMPIRNVIAWITLIAGKA 48
L+ G+ L +KSGSL +V +P ++W +L+ +
Sbjct: 20 LLPGAHLHASLLKSGSLASFRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYS 79
Query: 49 QNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVG 108
NGL + ++ MR G ++ + V+ C A LG Q+HA + G DV
Sbjct: 80 NNGLPRSAIQAFHGMRAEGVCCNEFA-LPVVLKCVPDARLGA--QVHAMAMATGFGSDVF 136
Query: 109 VISSLISMYSRCGCLDDSVKTFLECEYS-DVVLWSSMIAAYGFHGKGEEAINLFEQMEQK 167
V ++L++MY G +DD+ + F E + + V W+ +++AY + + +AI +F +M
Sbjct: 137 VANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWS 196
Query: 168 EFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDE 227
+ + F ++ AC+ E G + ++V+ K +VD+ + G +D
Sbjct: 197 GIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFT-ANALVDMYMKMGRVDI 255
Query: 228 AAALIRNMPVKANAIIWKTLLSAC 251
A+ + MP ++ + W L+S C
Sbjct: 256 ASVIFEKMP-DSDVVSWNALISGC 278
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 328 bits (840), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 167/444 (37%), Positives = 255/444 (57%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D + L Y K L + +V ++IA ++I +Q E + +
Sbjct: 434 GFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLF 493
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G PD S++++C+ L+ QG+Q+HA ++K D ++L+ Y++C
Sbjct: 494 MEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKC 553
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++D+ F VV WS+MI HG G+ A+ LF +M + N +T S+L
Sbjct: 554 GSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVL 613
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+H GL ++ +F+ M + + EHY+C++DLLGR G LD+A L+ +MP +AN
Sbjct: 614 CACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQAN 673
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A IW LL A + HK ++ AE++ + P+ + +VLL+N +ASA W V++ R+
Sbjct: 674 ASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKL 733
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M++ N+KKEP +SW+E+K++VH F +GDKSHP + EI L EL M G+VP+ D
Sbjct: 734 MKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKAGFVPNVDVD 793
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA----------EHTRGLIVM----LPFKYISEIKNR 406
+HD+D EKE L HHSE+LA+AFA + L + + FK+IS+I +R
Sbjct: 794 LHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHVAFKFISKIVSR 853
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EII+RD +RFHHFR+G CSCGDYW
Sbjct: 854 EIIIRDINRFHHFRDGTCSCGDYW 877
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 127/269 (47%), Gaps = 8/269 (2%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G L MY K+ L + KV M R++I LI+G + G ++ L + +R G
Sbjct: 341 GVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGL 400
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
++ T +V+ S + L +Q+HA VK G D V++ LI Y +C CL D+ +
Sbjct: 401 GVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANR 460
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F EC D++ +SMI A GE AI LF +M +K E + SLL AC+
Sbjct: 461 VFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSA 520
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
E+G + ++K+ +V +CG +++A ++P + + W ++
Sbjct: 521 YEQGKQVHAHLIKRQFMSDAFAG-NALVYTYAKCGSIEDAELAFSSLPERG-VVSWSAMI 578
Query: 249 SACKTH----KSTDMAGRIAEEILGVNPQ 273
H ++ ++ GR+ +E G+NP
Sbjct: 579 GGLAQHGHGKRALELFGRMVDE--GINPN 605
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 128/278 (46%), Gaps = 11/278 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPI-RNVIAWITLIAGKAQNGLAEDVLDQ 59
GF D+ ++L MY G + + +V RN ++W L++ +N D +
Sbjct: 130 GFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQV 189
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ M G +P + F V+++C+ + G+Q+HA VV+ G DV ++L+ MY +
Sbjct: 190 FGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMK 249
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G +D + F + SDVV W+++I+ +G AI L QM+ N T S+
Sbjct: 250 MGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSI 309
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV--VDLLGRCGYLDEAAALIRNMPV 237
L ACS G + G + M+K + Y V VD+ + +LD+A + M
Sbjct: 310 LKACSGAGAFDLGRQIHGFMIKA---NADSDDYIGVGLVDMYAKNHFLDDARKVFDWM-F 365
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRIAEEI----LGVN 271
+ I+ L+S C D A + E+ LGVN
Sbjct: 366 HRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVN 403
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 94/180 (52%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G++ D+ ++L MYMK G + + MP +V++W LI+G NG ++
Sbjct: 232 GYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELL 291
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G P+ T S++ +CS G+QIH ++KA A D + L+ MY++
Sbjct: 292 LQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKN 351
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
LDD+ K F + D++L +++I+ G+ +EA++LF ++ ++ N T ++L
Sbjct: 352 HFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVL 411
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 119/264 (45%), Gaps = 23/264 (8%)
Query: 6 LVAGSSLAHMYMKSGSLVE-----------------GEKVIRLMPIRNVIAWITLIAGKA 48
L+ G+ L +KSGSL + +P ++W +L+ +
Sbjct: 20 LLPGAHLHASLLKSGSLASFRNHLISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYS 79
Query: 49 QNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVG 108
NGL + ++ MR G ++ + V+ C A LG Q+HA + G DV
Sbjct: 80 NNGLPRSAIQAFHGMRAEGVCCNEFA-LPVVLKCVPDARLGA--QVHAMAMATGFGSDVF 136
Query: 109 VISSLISMYSRCGCLDDSVKTFLECEYS-DVVLWSSMIAAYGFHGKGEEAINLFEQMEQK 167
V ++L++MY G +DD+ + F E + + V W+ +++AY + + +AI +F +M
Sbjct: 137 VANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWS 196
Query: 168 EFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDE 227
+ + F ++ AC+ E G + ++V+ K +VD+ + G +D
Sbjct: 197 GIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFT-ANALVDMYMKMGRVDI 255
Query: 228 AAALIRNMPVKANAIIWKTLLSAC 251
A+ + MP ++ + W L+S C
Sbjct: 256 ASVIFEKMP-DSDVVSWNALISGC 278
>gi|357502521|ref|XP_003621549.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87241485|gb|ABD33343.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355496564|gb|AES77767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 654
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 162/446 (36%), Positives = 266/446 (59%), Gaps = 16/446 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+E + ++L +Y + G + V MP +N+++W +IA A+N + L+ +
Sbjct: 209 GYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWSAMIACYAKNEMPMKALELF 268
Query: 61 NLMRM--VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
+M + P+ IT VSV+ +C+ LA L G+ +HA V++ G + V+++LI+MY
Sbjct: 269 QIMMLEACDTVPNPITMVSVLQACASLAALEHGKLVHAYVLRRGLDSTLPVLNTLITMYG 328
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
RCG + + F + DV+ W+S+I+ YG HG G++AI +FE M + + +TF++
Sbjct: 329 RCGEISTGQRVFDYMKKRDVISWNSLISIYGMHGLGKKAIQIFENMINRGVSPSYITFIT 388
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+L ACSH GL E+ F+ M+ KYR PR+EHY C+VD+LGR LDEA LI+NM K
Sbjct: 389 VLCACSHAGLVEEAKILFESMLNKYRIHPRMEHYACMVDILGRANRLDEAIELIQNMDFK 448
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
+W +LL +C+ H + ++A R + + + P++A YVLLS+I+A ++ W V R
Sbjct: 449 PGPTVWGSLLGSCRIHCNVELAERASAMLFELEPKNAGNYVLLSHIYAKSRMWNDVRRVR 508
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
+ + R ++K P SW+E+K +++ ++ +P+ E+ +L L +E+K +GYVP T
Sbjct: 509 KQLESRGLQKIPSCSWIEVKRKIYSLVSIEEYNPQIEELCAFLITLLTEIKNQGYVPQTN 568
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVMLP------------FKYISEIK 404
+D+D EEKE + HS KLA+AF ++G I+ + K++S+
Sbjct: 569 VVTYDLDEEEKERIVLGHSGKLAVAFGLINTSKGEIIRISNNLRLCEDCHAFMKFVSKFT 628
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
NREI++RD +RFH F++G CSCGDYW
Sbjct: 629 NREILLRDVNRFHCFKDGVCSCGDYW 654
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 130/280 (46%), Gaps = 10/280 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + D + L +MY GS+ KV + + W + A ED+L Y
Sbjct: 104 GLDQDPYLATKLINMYCDLGSVDHACKVFDETREKTIFVWNAIFRALAMASRGEDLLVLY 163
Query: 61 NLMRMVGFRPDKITFVSVISSC--SELA--TLGQGQQIHAEVVKAGASLDVGVISSLISM 116
M +G ++ T+ V+ +C SEL+ L +G++IHA +++ G V V+++L+ +
Sbjct: 164 GQMNWIGIPSNRFTYTYVLKACVVSELSICPLRKGKEIHAHILRHGYEGHVHVMTTLLDV 223
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM--EQKEFEANDV 174
Y+R G + + F ++V WS+MIA Y + +A+ LF+ M E + N +
Sbjct: 224 YARFGYVSYASSVFGAMPDKNIVSWSAMIACYAKNEMPMKALELFQIMMLEACDTVPNPI 283
Query: 175 TFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRN 234
T VS+L AC+ E G + V + L ++ + GRCG + +
Sbjct: 284 TMVSVLQACASLAALEHG-KLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQRVFDY 342
Query: 235 MPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNP 272
M K + I W +L+S H A +I E ++ GV+P
Sbjct: 343 MK-KRDVISWNSLISIYGMHGLGKKAIQIFENMINRGVSP 381
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 101/213 (47%), Gaps = 9/213 (4%)
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P K TF +I+SC E +L G +H +V +G D + + LI+MY G +D + K
Sbjct: 72 PTKKTFELLINSCIEQNSLSDGVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDHACKV 131
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC-----S 184
F E + +W+++ A +GE+ + L+ QM +N T+ +L AC S
Sbjct: 132 FDETREKTIFVWNAIFRALAMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACVVSELS 191
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
C L+ KG E ++ ++ + + T ++D+ R GY+ A+++ MP K N + W
Sbjct: 192 ICPLR-KGKEIHAHIL-RHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDK-NIVSW 248
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAP 277
++ AC M +I+ + D P
Sbjct: 249 SAMI-ACYAKNEMPMKALELFQIMMLEACDTVP 280
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 327 bits (839), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 162/413 (39%), Positives = 251/413 (60%), Gaps = 14/413 (3%)
Query: 32 MPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQG 91
M +N+I+W +IA N + + + + M G +PD +T S++ +C +L+ L G
Sbjct: 266 MTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLG 325
Query: 92 QQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFH 151
+++H + K ++ + ++L+ MY++CGCL+++ F + DVV W+SM++AYG
Sbjct: 326 RRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRS 385
Query: 152 GKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEH 211
G+G +A+ LF +M + + FVS+L ACSH GL ++G +F +M ++Y PR+EH
Sbjct: 386 GQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEH 445
Query: 212 YTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVN 271
+ C+VDL GR G ++EA + I+ MP++ N +W LLSAC+ H D+ A+ + +
Sbjct: 446 FACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLA 505
Query: 272 PQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSH 331
P+ + YVLLSNI+A A W+ V R AM++ +KK PG+S +E+ QVH F GD+ H
Sbjct: 506 PKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYH 565
Query: 332 PRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFA------ 385
P++ I L+ L +MK GY+P T + +HD++ E+KE +L HSEKLAI FA
Sbjct: 566 PQAKNIYGELDVLVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKQ 625
Query: 386 ----EHTRGLIVM----LPFKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
T+ L V + K IS+I +R IIVRD +RFHHF NG CSCGDYW
Sbjct: 626 GTPIRITKNLRVCGDCHIAIKLISKIVSRNIIVRDCNRFHHFSNGICSCGDYW 678
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 138/287 (48%), Gaps = 18/287 (6%)
Query: 35 RNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQI 94
+NV+ + +I N L + L + +M F PD TF V+ +CS L L G Q+
Sbjct: 100 KNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQV 159
Query: 95 HAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKG 154
H +VK G ++ + ++L++MY +CGCL ++ K + Y DVV W+SM+A Y G+
Sbjct: 160 HDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQF 219
Query: 155 EEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC 214
++A+ + ++M+ + T SL + L+ +++ M ++ +K L +
Sbjct: 220 DDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLEN--VQYIHNMFERMTKK-NLISWNV 276
Query: 215 VVDLLGRCGYLDEAAALIRNMP---VKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVN 271
++ + +EA +L M +K +A+ +LL AC + + R+ + I N
Sbjct: 277 MIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGN 336
Query: 272 PQDAAPYVLLSN----IHASAKRWQGVSEFREAMRERNVKKEPGVSW 314
Q P +LL N ++A + + + MR R+V VSW
Sbjct: 337 LQ---PNLLLENALLDMYAKCGCLEEARDVFDKMRLRDV-----VSW 375
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 132/300 (44%), Gaps = 37/300 (12%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + +L G++L MY K G L E KV+ MP R+V++W +++AG AQ+G +D L+
Sbjct: 167 GLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEIC 226
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M + D T S +S +L Q IH +M+ R
Sbjct: 227 KEMDSLNLNHDAGTMAS-LSPVVCYTSLENVQYIH-------------------NMFER- 265
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
+++ W+ MIA Y + EA++LF QME+ + + VT SLL
Sbjct: 266 ------------MTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLL 313
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC G ++K +P L ++D+ +CG L+EA + M ++ +
Sbjct: 314 PACGDLSALFLGRRLHKY-IEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKMRLR-D 371
Query: 241 AIIWKTLLSAC-KTHKSTDMAGRIAEEI-LGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
+ W +++SA ++ + D A+ + G NP A +LS + QG FR
Sbjct: 372 VVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFR 431
>gi|297598748|ref|NP_001046155.2| Os02g0191200 [Oryza sativa Japonica Group]
gi|46390971|dbj|BAD16484.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50726401|dbj|BAD34012.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|255670678|dbj|BAF08069.2| Os02g0191200 [Oryza sativa Japonica Group]
Length = 744
Score = 327 bits (839), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 171/434 (39%), Positives = 249/434 (57%), Gaps = 24/434 (5%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y K G + + M +R++I + +++ G +G + L + MR R D T
Sbjct: 316 YCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTV 375
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
V+++++C+ L L QG+ +HA + + D+ + ++L+ MY +CG +D++ F
Sbjct: 376 VNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRMGK 435
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
DV W++MIA F+G G+ A+ F QM F+ N V+++++L ACSH L +G +
Sbjct: 436 RDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLLNEGRLY 495
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK 255
FD M Y P++EHY C++DLLGR G LDEA L++ MP++ NA+IW ++LSAC+ HK
Sbjct: 496 FDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWASILSACRVHK 555
Query: 256 STDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWL 315
D+A AE +L + P + YV L NI+ +++W+ S+ R M ER VKK G S +
Sbjct: 556 HIDLAQCAAEHLLKLEPDEDGVYVQLYNIYIDSRQWENASKIRMLMEERQVKKTAGYSSI 615
Query: 316 EIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKH 375
+ QVH+F + DKSHPR +EI LEE++ +K GY P T D+D EEKE L
Sbjct: 616 TVAGQVHKFVVSDKSHPRILEIIAMLEEISHRLKSLGYSPLTSQITVDVDEEEKEQALLA 675
Query: 376 HSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREIIVRDASRF 416
HSEKLAIAF GLI + P K IS + NREIIVRD SRF
Sbjct: 676 HSEKLAIAF-----GLINLAPNLPVHIRKNLRVCEDCHSAIKLISRLWNREIIVRDRSRF 730
Query: 417 HHFRNGKCSCGDYW 430
HHFR G CSC D+W
Sbjct: 731 HHFREGTCSCNDFW 744
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 132/277 (47%), Gaps = 34/277 (12%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D VA + L K G L + + ++ P+R+VI+W +LIA ++ A + + + M
Sbjct: 172 DAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTML 231
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG--- 121
G PD++T ++V+S+C++L L G+ +H V + G ++ +LI MY++CG
Sbjct: 232 SHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFG 291
Query: 122 -------------------------C----LDDSVKTFLECEYSDVVLWSSMIAAYGFHG 152
C +D + F E E D++ ++SM+ Y G
Sbjct: 292 HAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSG 351
Query: 153 KGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY 212
+ EA+ LF M + + ++ T V+LL AC+ G ++G +++ + +
Sbjct: 352 QLREALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQQG-RALHACIEQRLVEADIYLG 410
Query: 213 TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
T ++D+ +CG +DEA + + M K + W +++
Sbjct: 411 TALLDMYMKCGRVDEATIVFQRMG-KRDVHTWTAMIA 446
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 82/162 (50%), Gaps = 24/162 (14%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E D+ G++L MYMK G + E V + M R+V W +IAG A NG+ + L+ +
Sbjct: 404 EADIYLGTALLDMYMKCGRVDEATIVFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQ 463
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQ----------QIHAEVVKAGASLDVGVISS 112
MR GF+P+ +++++V+++CS L +G+ IH ++ G +D
Sbjct: 464 MRCDGFQPNSVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMID------ 517
Query: 113 LISMYSRCGCLD---DSVKTFLECEYSDVVLWSSMIAAYGFH 151
+ R G LD D VKT + V+W+S+++A H
Sbjct: 518 ---LLGRSGLLDEAMDLVKTMP--IQPNAVIWASILSACRVH 554
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 96/255 (37%), Gaps = 60/255 (23%)
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELA----TLGQGQQIHAEVVKAGASLDVGVIS-SLI 114
+ MR G RPD TF + CS + +L +HA ++ +S SLI
Sbjct: 91 FRRMRRAGVRPDGFTF-HFLFKCSSSSSRPHSLLLCTMLHAACLRTMLPSAAPFVSNSLI 149
Query: 115 SMYSRCGCLDDSVKTFLE----------------------CEYS---------DVVLWSS 143
MY R G D+ + F E C+ DV+ W+S
Sbjct: 150 HMYIRLGLAADARRAFDEIHVKDAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTS 209
Query: 144 MIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS-----------HCGLKEKG 192
+IAAY + EA+ F+ M ++VT +++L AC+ H ++EKG
Sbjct: 210 LIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKG 269
Query: 193 MEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACK 252
M + +V ++D+ +CG A + + W ++
Sbjct: 270 MPTSENLV------------VALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYC 317
Query: 253 THKSTDMAGRIAEEI 267
H D+A + +E+
Sbjct: 318 KHGHVDVARSLFDEM 332
>gi|413946615|gb|AFW79264.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 682
Score = 327 bits (839), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 170/443 (38%), Positives = 257/443 (58%), Gaps = 14/443 (3%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
EL++ GS+L MY K + + + ++P +NV++W ++ QN L ED L +
Sbjct: 240 LELNVYVGSALVDMYGKCDHVHDANRAFEVLPEKNVVSWTAVMTAYTQNELYEDALQLFL 299
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M M G +P++ T+ ++SC+ LA L G + A V+K G + V ++L++MYS+ G
Sbjct: 300 DMEMEGVQPNEFTYAVALNSCAGLAALRTGNALGACVMKTGHWDHLLVSNALMNMYSKSG 359
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
++D+ + F+ DVV W+ +I Y HG E + F M + VTFV +L
Sbjct: 360 SIEDAHRVFISMPLRDVVSWNLIITGYAHHGLAREGMEAFHSMLSAAVIPSYVTFVGVLS 419
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
AC+ GL ++ + + M+K+ P EHYTC+V LL R G LDEA I N + +
Sbjct: 420 ACAQLGLVDEAFYYLNTMMKEVGITPGKEHYTCMVGLLCRVGRLDEAERFIVNNCIGTDV 479
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
+ W++LL++C+ +K+ + R+AE+IL + P D YVLLSN++A A RW GV + R+ M
Sbjct: 480 VAWRSLLNSCQVYKNYGLGHRVAEQILQLEPSDVGTYVLLSNMYAKANRWDGVVKVRKHM 539
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
RER V+K PGVSW+ + + VH FT +K HP+ +I LEEL ++K GYVP+ +
Sbjct: 540 RERAVRKSPGVSWIHVGSDVHVFTSEEKVHPQMDQIAKKLEELIDQIKAIGYVPNFAVVL 599
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFAE-HT-RGLIVML------------PFKYISEIKNRE 407
HD+D E KE +L +HSEKLA+AF HT +G + + K IS + +R+
Sbjct: 600 HDIDDERKEEHLMYHSEKLALAFGLIHTPKGATIHIMKNLRICDDCHVAIKLISVVTSRK 659
Query: 408 IIVRDASRFHHFRNGKCSCGDYW 430
I+VRDA RFH G CSC DYW
Sbjct: 660 IVVRDAVRFHCIEGGICSCNDYW 682
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 139/284 (48%), Gaps = 11/284 (3%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
D+V ++L Y K G + V MP RN ++ L++G A +G ++ L L+
Sbjct: 43 FDVVLHNNLISFYAKCGRVGLARTVFDAMPFRNAVSANLLMSGYASSGRHKESL---QLL 99
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
R+V F ++ + +S+ + + + G+Q H VKAG + V ++++ MY +C +
Sbjct: 100 RVVDFGMNEYVLSAAVSATANVRSYDMGRQCHGYAVKAGFAEQRYVFNAVLYMYCQCAHM 159
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
+D+ K F D ++SMI Y G+ + ++ + M + + + V++V++L
Sbjct: 160 EDASKVFESVSGFDAFAFNSMINGYLDRGQLDGSLGIVRNMTGEAEKWDYVSYVAVL--- 216
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHY--TCVVDLLGRCGYLDEAAALIRNMPVKANA 241
HC + + + + +++ L Y + +VD+ G+C ++ +A +P K N
Sbjct: 217 GHCASMKDSVLGAQVHAQALKKRLELNVYVGSALVDMYGKCDHVHDANRAFEVLPEK-NV 275
Query: 242 IIWKTLLSACKTHKSTDMAGR--IAEEILGVNPQDAAPYVLLSN 283
+ W +++A ++ + A + + E+ GV P + V L++
Sbjct: 276 VSWTAVMTAYTQNELYEDALQLFLDMEMEGVQPNEFTYAVALNS 319
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 118/254 (46%), Gaps = 2/254 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF +++ +MY + + + KV + + A+ ++I G G + L
Sbjct: 138 GFAEQRYVFNAVLYMYCQCAHMEDASKVFESVSGFDAFAFNSMINGYLDRGQLDGSLGIV 197
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M + D +++V+V+ C+ + G Q+HA+ +K L+V V S+L+ MY +C
Sbjct: 198 RNMTGEAEKWDYVSYVAVLGHCASMKDSVLGAQVHAQALKKRLELNVYVGSALVDMYGKC 257
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
+ D+ + F +VV W++++ AY + E+A+ LF ME + + N+ T+ L
Sbjct: 258 DHVHDANRAFEVLPEKNVVSWTAVMTAYTQNELYEDALQLFLDMEMEGVQPNEFTYAVAL 317
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
+C+ G V K L ++++ + G +++A + +MP++ +
Sbjct: 318 NSCAGLAALRTG-NALGACVMKTGHWDHLLVSNALMNMYSKSGSIEDAHRVFISMPLR-D 375
Query: 241 AIIWKTLLSACKTH 254
+ W +++ H
Sbjct: 376 VVSWNLIITGYAHH 389
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 30/148 (20%), Positives = 74/148 (50%), Gaps = 5/148 (3%)
Query: 88 LGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAA 147
L +G+ +HA ++ A A DV + ++LIS Y++CG + + F + + V + +++
Sbjct: 27 LSKGKALHARLITA-AHFDVVLHNNLISFYAKCGRVGLARTVFDAMPFRNAVSANLLMSG 85
Query: 148 YGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKP 207
Y G+ +E++ L + +F N+ + + A ++ + G + VK +
Sbjct: 86 YASSGRHKESLQLLRVV---DFGMNEYVLSAAVSATANVRSYDMGRQCHGYAVKAGFAEQ 142
Query: 208 RLEHYTCVVDLLGRCGYLDEAAALIRNM 235
R + V+ + +C ++++A+ + ++
Sbjct: 143 RYV-FNAVLYMYCQCAHMEDASKVFESV 169
>gi|15240085|ref|NP_196272.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170345|sp|Q9FG16.1|PP367_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g06540
gi|10178110|dbj|BAB11403.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332003649|gb|AED91032.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 622
Score = 327 bits (839), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 178/445 (40%), Positives = 263/445 (59%), Gaps = 16/445 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D+V+ +S+ Y K G + ++ MP RN+ W +I G A+N E +D +
Sbjct: 179 GFR-DVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLF 237
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G ++ VSVISSC+ L L G++ + VVK+ ++++ + ++L+ M+ RC
Sbjct: 238 EFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRC 297
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ ++ F +D + WSS+I HG +A++ F QM F DVTF ++L
Sbjct: 298 GDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVL 357
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL EKG+E ++ M K + +PRLEHY C+VD+LGR G L EA I M VK N
Sbjct: 358 SACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPN 417
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A I LL ACK +K+T++A R+ ++ V P+ + YVLLSNI+A A +W + R+
Sbjct: 418 APILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDM 477
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMG-DKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M+E+ VKK PG S +EI ++++FTMG D+ HP +I EE+ +++L GY +TG
Sbjct: 478 MKEKLVKKPPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGD 537
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKN 405
D+D EEKE ++ HSEKLAIA+ + G + + K ISE+
Sbjct: 538 AFFDVDEEEKESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYG 597
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
RE+IVRD +RFHHFRNG CSC DYW
Sbjct: 598 RELIVRDRNRFHHFRNGVCSCRDYW 622
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 131/276 (47%), Gaps = 41/276 (14%)
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
PD ITF +I + SE+ + G+Q H+++V+ G DV V +SL+ MY+ CG + + +
Sbjct: 115 PDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRI 174
Query: 130 FLECEYSDVVLWSSMIAAY-----------------------------GFHGKG--EEAI 158
F + + DVV W+SM+A Y G+ E+AI
Sbjct: 175 FGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAI 234
Query: 159 NLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDL 218
+LFE M+++ AN+ VS++ +C+H G E G ++ +VK + L T +VD+
Sbjct: 235 DLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSH-MTVNLILGTALVDM 293
Query: 219 LGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAA 276
RCG +++A + +P + +++ W +++ H A ++ LG P+D
Sbjct: 294 FWRCGDIEKAIHVFEGLP-ETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVT 352
Query: 277 PYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGV 312
+LS +G+ + N+KK+ G+
Sbjct: 353 FTAVLSACSHGGLVEKGLEIY------ENMKKDHGI 382
>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Glycine max]
Length = 634
Score = 327 bits (839), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 169/450 (37%), Positives = 262/450 (58%), Gaps = 26/450 (5%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
+E + GSSL MY K G + E + + +P R+V++ +I+G AQ GL E+ L+ +
Sbjct: 190 YEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFR 249
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
++ G + + +T+ SV+++ S LA L G+Q+H ++++ V + +SLI MYS+CG
Sbjct: 250 RLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCG 309
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM-EQKEFEANDVTFVSLL 180
L + + F V+ W++M+ Y HG+G E + LF M ++ + + + VT +++L
Sbjct: 310 NLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVL 369
Query: 181 YACSHCGLKEKGME-FFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
CSH GL++KGM+ F+D+ K +P +HY CVVD+LGR G ++ A ++ MP +
Sbjct: 370 SGCSHGGLEDKGMDIFYDMTSGKISVQPDSKHYGCVVDMLGRAGRVEAAFEFVKKMPFEP 429
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
+A IW LL AC H + D+ + ++L + P++A YV+LSN++ASA RW+ V R
Sbjct: 430 SAAIWGCLLGACSVHSNLDIGEFVGHQLLQIEPENAGNYVILSNLYASAGRWEDVRSLRN 489
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M ++ V KEPG SW+E+ +H F D SHPR E+ ++EL++ K GYVPD
Sbjct: 490 LMLKKAVTKEPGRSWIELDQVLHTFHASDCSHPRREEVSAKVQELSARFKEAGYVPDLSC 549
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVM---LPF----------------KYI 400
+HD+D E+KE L HSEKLA+ F GLI +P KY
Sbjct: 550 VLHDVDEEQKEKILLSHSEKLALTF-----GLIATPESVPIRVIKNLRICVDCHNFAKYT 604
Query: 401 SEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
S+I RE+ +RD +RFH GKCSCGDYW
Sbjct: 605 SKIYGREVSLRDKNRFHRIVGGKCSCGDYW 634
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 120/240 (50%), Gaps = 2/240 (0%)
Query: 15 MYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKIT 74
Y+K SL + V +MP RNV++W +I+ +Q G A L + M G P++ T
Sbjct: 102 FYVKCDSLRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFT 161
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
F +V++SC + G+QIH+ ++K V V SSL+ MY++ G + ++ F
Sbjct: 162 FATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLP 221
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGME 194
DVV +++I+ Y G EEA+ LF +++++ ++N VT+ S+L A S + G +
Sbjct: 222 ERDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQ 281
Query: 195 FFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
+ +++ + ++D+ +CG L A + + + I W +L H
Sbjct: 282 VHNHLLRS-EVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHER-TVISWNAMLVGYSKH 339
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 89/185 (48%), Gaps = 5/185 (2%)
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M + G + + +V++ C + +GQ++HA ++K V + + LI Y +C
Sbjct: 49 MALRGLDTNFQDYNTVLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDS 108
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
L D+ F +VV W++MI+AY G +A++LF QM + E N+ TF ++L +
Sbjct: 109 LRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTS 168
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP----VK 238
C G + ++ K + + + ++D+ + G + EA + + +P V
Sbjct: 169 CIGSSGFVLGRQIHSHII-KLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVS 227
Query: 239 ANAII 243
AII
Sbjct: 228 CTAII 232
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 327 bits (839), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 162/413 (39%), Positives = 251/413 (60%), Gaps = 14/413 (3%)
Query: 32 MPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQG 91
M +N+I+W +IA N + + + + M G +PD +T S++ +C +L+ L G
Sbjct: 266 MTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLG 325
Query: 92 QQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFH 151
+++H + K ++ + ++L+ MY++CGCL+++ F + DVV W+SM++AYG
Sbjct: 326 RRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRS 385
Query: 152 GKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEH 211
G+G +A+ LF +M + + FVS+L ACSH GL ++G +F +M ++Y PR+EH
Sbjct: 386 GQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEH 445
Query: 212 YTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVN 271
+ C+VDL GR G ++EA + I+ MP++ N +W LLSAC+ H D+ A+ + +
Sbjct: 446 FACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLA 505
Query: 272 PQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSH 331
P+ + YVLLSNI+A A W+ V R AM++ +KK PG+S +E+ QVH F GD+ H
Sbjct: 506 PKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYH 565
Query: 332 PRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFA------ 385
P++ I L+ L +MK GY+P T + +HD++ E+KE +L HSEKLAI FA
Sbjct: 566 PQAKNIYGELDVLVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKQ 625
Query: 386 ----EHTRGLIVM----LPFKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
T+ L V + K IS+I +R IIVRD +RFHHF NG CSCGDYW
Sbjct: 626 GTPIRITKNLRVCGDCHIAIKLISKIVSRNIIVRDCNRFHHFSNGICSCGDYW 678
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 138/287 (48%), Gaps = 18/287 (6%)
Query: 35 RNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQI 94
+NV+ + +I N L + L + +M F PD TF V+ +CS L L G Q+
Sbjct: 100 KNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQV 159
Query: 95 HAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKG 154
H +VK G ++ + ++L++MY +CGCL ++ K + Y DVV W+SM+A Y G+
Sbjct: 160 HDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQF 219
Query: 155 EEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC 214
++A+ + ++M+ + T SL + L+ +++ M ++ +K L +
Sbjct: 220 DDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLEN--VQYIHNMFERMTKK-NLISWNV 276
Query: 215 VVDLLGRCGYLDEAAALIRNMP---VKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVN 271
++ + +EA +L M +K +A+ +LL AC + + R+ + I N
Sbjct: 277 MIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGN 336
Query: 272 PQDAAPYVLLSN----IHASAKRWQGVSEFREAMRERNVKKEPGVSW 314
+ P +LL N ++A + + + MR R+V VSW
Sbjct: 337 LR---PNLLLENALLDMYAKCGCLEEARDVFDKMRLRDV-----VSW 375
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 132/300 (44%), Gaps = 37/300 (12%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + +L G++L MY K G L E KV+ MP R+V++W +++AG AQ+G +D L+
Sbjct: 167 GLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEIC 226
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M + D T S +S +L Q IH +M+ R
Sbjct: 227 KEMDSLNLNHDAGTMAS-LSPVVCYTSLENVQYIH-------------------NMFER- 265
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
+++ W+ MIA Y + EA++LF QME+ + + VT SLL
Sbjct: 266 ------------MTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLL 313
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC G ++K +P L ++D+ +CG L+EA + M ++ +
Sbjct: 314 PACGDLSALFLGRRLHKY-IEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRLR-D 371
Query: 241 AIIWKTLLSAC-KTHKSTDMAGRIAEEI-LGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
+ W +++SA ++ + D A+ + G NP A +LS + QG FR
Sbjct: 372 VVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFR 431
>gi|115483184|ref|NP_001065185.1| Os10g0540100 [Oryza sativa Japonica Group]
gi|78708963|gb|ABB47938.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|113639794|dbj|BAF27099.1| Os10g0540100 [Oryza sativa Japonica Group]
gi|125575555|gb|EAZ16839.1| hypothetical protein OsJ_32311 [Oryza sativa Japonica Group]
gi|215704329|dbj|BAG93763.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 681
Score = 327 bits (839), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 173/446 (38%), Positives = 257/446 (57%), Gaps = 19/446 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +D+V +SL MY K+G L +V LM RN ++W +I+G AQNG +++ L +
Sbjct: 239 GMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLF 298
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVI--SSLISMYS 118
M+ G +PD VS + +CS + L G+ +H +V+ D I ++ I MYS
Sbjct: 299 RNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVR---RFDFNCILGTAAIDMYS 355
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+CG L + F D++LW++MIA G HG+G++A+ LF++M + + TF S
Sbjct: 356 KCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFAS 415
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
LL A SH GL E+G +F MV ++ P +HY C+VDLL R G ++EA+ L+ +M +
Sbjct: 416 LLSALSHSGLVEEGKLWFGRMVNHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAE 475
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
IW LLS C +K ++ IA+ IL + P D L+SN++A+ K+W V + R
Sbjct: 476 PTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSNLYAATKKWDKVRQVR 535
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
+ M++ KK PG S +EI+ H F M D+SHP+ EI + +L EM+ GY+P T
Sbjct: 536 KLMKDSGSKKMPGCSSIEIRGTRHVFVMEDQSHPQREEIVSKVAKLDLEMRKMGYIPRTE 595
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRG----LIVML----------PFKYISEIK 404
HD++ E KE L +HSE+LAIAF G L+++ KYIS+I
Sbjct: 596 FVYHDLEEEVKEQQLSYHSERLAIAFGLLNTGPGTRLVIIKNLRVCGDCHDAIKYISKIA 655
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
+REI+VRDA RFHHF++G CSC DYW
Sbjct: 656 DREIVVRDAKRFHHFKDGVCSCRDYW 681
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 152/307 (49%), Gaps = 12/307 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G++ D+ SSL H+Y + G++ + KV MP R+ + W T++AG G D + Y
Sbjct: 138 GYKDDVFVCSSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMY 197
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
MR G + D++ + VI +C+ + G +H +++ G +DV +SL+ MY++
Sbjct: 198 RRMREDGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKN 257
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G LD + + F + + V WS+MI+ + +G+ +EA+ LF M+ + + VS L
Sbjct: 258 GLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSAL 317
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACS+ G + G +V+++ L T +D+ +CG L A L NM +
Sbjct: 318 LACSNIGFLKLGRSVHGFIVRRFDFNCILG--TAAIDMYSKCGSLASAQMLF-NMISDRD 374
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLSNIHAS-----AKRWQG 293
I+W +++ C H A + +E+ G+ P A LLS + S K W G
Sbjct: 375 LILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFG 434
Query: 294 --VSEFR 298
V+ F+
Sbjct: 435 RMVNHFK 441
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 101/210 (48%), Gaps = 4/210 (1%)
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
RPD TF +S+C+ L L G+ + AG DV V SSL+ +Y+R G + D+VK
Sbjct: 105 RPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVK 164
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F+ D V WS+M+A + G+ +AI ++ +M + + ++V + ++ AC+
Sbjct: 165 VFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARN 224
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
G +++ R + T +VD+ + G LD A + + V N + W ++
Sbjct: 225 VRMGASVHGHLLRHGMRMDVVT-ATSLVDMYAKNGLLD-VACRVFGLMVHRNDVSWSAMI 282
Query: 249 SACKTHKSTDMAGRIAEEIL--GVNPQDAA 276
S + +D A R+ + G+ P A
Sbjct: 283 SGFAQNGQSDEALRLFRNMQASGIQPDSGA 312
>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 861
Score = 327 bits (838), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 169/462 (36%), Positives = 258/462 (55%), Gaps = 46/462 (9%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV--- 66
++L MY + G + E + ++ +R++++W TLI G GL + M++
Sbjct: 405 NALMDMYARLGRMDEAHTIFAMIDLRDIVSWNTLITGCIVQGLISEAFQLVREMQLPSSA 464
Query: 67 ---------------GFR--PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV 109
G R P+ IT ++++ C+ LA +G++IH V+ D+ V
Sbjct: 465 ASGETMLEGDDTSVDGQRCMPNNITLMTLLPGCAVLAAPARGKEIHGYAVRHALESDLAV 524
Query: 110 ISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM-EQKE 168
S+L+ MY++CGCL + F +V+ W+ +I AYG HG G+EA+ LF++M E
Sbjct: 525 GSALVDMYAKCGCLALARAVFDRLPRRNVITWNVLIMAYGMHGLGDEALALFDRMVANGE 584
Query: 169 FEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEA 228
N+VTF++ L ACSH GL ++G+E F M + Y +P + CVVD+LGR G LDEA
Sbjct: 585 ATPNEVTFIAALAACSHSGLVDRGLELFQGMKRDYGFEPTPYLHACVVDVLGRAGRLDEA 644
Query: 229 AALIRNM-PVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHAS 287
+I +M P + W T+L AC+ H++ + AE + + P +A+ YVLL NI+++
Sbjct: 645 YGIISSMAPGEHQVSAWSTMLGACRLHRNVKLGRIAAERLFELEPDEASHYVLLCNIYSA 704
Query: 288 AKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSE 347
A W+ +E R MR+R V KEPG SW+E+ +H+F G+ +HP S ++ +++ L
Sbjct: 705 AGLWENSTEVRGMMRQRGVAKEPGCSWIELDGAIHRFMAGESAHPESAQVHAHMDALWER 764
Query: 348 MKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP----------- 396
M+ GYVPDT +HD+D EK L++HSEKLAIAF GL+ P
Sbjct: 765 MRREGYVPDTSCVLHDVDEAEKAAMLRYHSEKLAIAF-----GLLRAPPGATIRVAKNLR 819
Query: 397 --------FKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
K+IS + REI++RD RFHHFR+G CSCGDYW
Sbjct: 820 VCNDCHEAAKFISRMVGREIVLRDVRRFHHFRDGTCSCGDYW 861
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 126/249 (50%), Gaps = 9/249 (3%)
Query: 10 SSLAHMYMKSGSLVEGEKVI--RLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVG 67
++L MY + G + + +++ + +++ W T+I+ Q G E+ + M +G
Sbjct: 196 NALLSMYARLGLVDDAQRLFFSSGAGVGDLVTWNTMISLLVQGGRCEEAVQVLYDMVALG 255
Query: 68 FRPDKITFVSVISSCSELATLGQGQQIHAEVVK-AGASLDVGVISSLISMYSRCGCLDDS 126
RPD +TF S + +CS L LG G+++HA V+K + + V S+L+ MY+ + +
Sbjct: 256 VRPDGVTFASALPACSRLELLGVGREVHAFVLKDDDLAANSFVASALVDMYASNEQVSHA 315
Query: 127 VKTF-LECEYS-DVVLWSSMIAAYGFHGK-GEEAINLFEQMEQKEFEA-NDVTFVSLLYA 182
+ F + E+ + +W++MI Y HG EEAI LF +ME + A ++ T +L A
Sbjct: 316 RRVFDMVPEHGRQLGMWNAMICGYAQHGGMDEEAIELFSRMEAEAGCAPSETTMAGVLPA 375
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
C+ + +VK+ R ++D+ R G +DEA + + ++ + +
Sbjct: 376 CARSEVFTGKEAVHGYVVKRDMASNRFVQ-NALMDMYARLGRMDEAHTIFAMIDLR-DIV 433
Query: 243 IWKTLLSAC 251
W TL++ C
Sbjct: 434 SWNTLITGC 442
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 121/276 (43%), Gaps = 26/276 (9%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMP--IRNVIAWITLIAGKAQNG-LAEDVLDQYNLMRM 65
S+L MY + + +V ++P R + W +I G AQ+G + E+ ++ ++ M
Sbjct: 299 ASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGGMDEEAIELFSRMEA 358
Query: 66 -VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G P + T V+ +C+ + +H VVK + + V ++L+ MY+R G +D
Sbjct: 359 EAGCAPSETTMAGVLPACARSEVFTGKEAVHGYVVKRDMASNRFVQNALMDMYARLGRMD 418
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEA------------- 171
++ F + D+V W+++I G EA L +M+ A
Sbjct: 419 EAHTIFAMIDLRDIVSWNTLITGCIVQGLISEAFQLVREMQLPSSAASGETMLEGDDTSV 478
Query: 172 -------NDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGY 224
N++T ++LL C+ +G E V ++ + L + +VD+ +CG
Sbjct: 479 DGQRCMPNNITLMTLLPGCAVLAAPARGKEIHGYAV-RHALESDLAVGSALVDMYAKCGC 537
Query: 225 LDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMA 260
L A A+ +P + N I W L+ A H D A
Sbjct: 538 LALARAVFDRLP-RRNVITWNVLIMAYGMHGLGDEA 572
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 70/138 (50%), Gaps = 9/138 (6%)
Query: 72 KITFVSVISSCSELATLGQ--GQQIHAEVVKAGASLDVG----VISSLISMYSRCGCLDD 125
T VSV+ +CS LA G G++ HA +K G LD G ++L+SMY+R G +DD
Sbjct: 152 SFTLVSVLLACSHLADQGHRLGREAHAFALKHG-FLDKGRERFPFNALLSMYARLGLVDD 210
Query: 126 SVKTFLE--CEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
+ + F D+V W++MI+ G+ EEA+ + M + VTF S L AC
Sbjct: 211 AQRLFFSSGAGVGDLVTWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPAC 270
Query: 184 SHCGLKEKGMEFFDLMVK 201
S L G E ++K
Sbjct: 271 SRLELLGVGREVHAFVLK 288
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 96/215 (44%), Gaps = 23/215 (10%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
E DL GS+L MY K G L V +P RNVI W LI +GL ++ L +
Sbjct: 517 ALESDLAVGSALVDMYAKCGCLALARAVFDRLPRRNVITWNVLIMAYGMHGLGDEALALF 576
Query: 61 NLMRMVG-FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVG------VISSL 113
+ M G P+++TF++ +++CS + +G ++ G D G + + +
Sbjct: 577 DRMVANGEATPNEVTFIAALAACSHSGLVDRGLELF-----QGMKRDYGFEPTPYLHACV 631
Query: 114 ISMYSRCGCLDDS---VKTFLECEYSDVVLWSSMIAAYGFHGK---GEEAINLFEQMEQK 167
+ + R G LD++ + + E+ V WS+M+ A H G A ++E
Sbjct: 632 VDVLGRAGRLDEAYGIISSMAPGEH-QVSAWSTMLGACRLHRNVKLGRIAAERLFELEPD 690
Query: 168 EFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKK 202
EA+ + +Y S GL E E +M ++
Sbjct: 691 --EASHYVLLCNIY--SAAGLWENSTEVRGMMRQR 721
>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
Length = 633
Score = 327 bits (838), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 164/446 (36%), Positives = 256/446 (57%), Gaps = 27/446 (6%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ GS+L MY + + V + +N ++W LIAG A+ E L ++ M+
Sbjct: 195 DVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGETTLMKFAEMQ 254
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
GF T+ S+ S+ + + L QG+ +HA ++K+G L V ++++ MY++ G +
Sbjct: 255 RNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMV 314
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D+ K F + D+V W++M+ A +G G+EA+ FE++ + + N +TF+S+L ACS
Sbjct: 315 DARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACS 374
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL ++G +FD+M K Y +P ++HY VDLLGR G L EA + MP++ A +W
Sbjct: 375 HGGLVKEGKHYFDMM-KDYNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVW 433
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
LL AC+ HK+ M A+ + ++P D P VLL NI+AS +W + R+ M+
Sbjct: 434 GALLGACRMHKNAKMGQYAADHVFELDPDDTGPPVLLYNIYASTGKWNDAARVRKMMKAT 493
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
VKKEP SW++I+N VH F D +HP+S +I EE+ +K GYVP+T + +
Sbjct: 494 GVKKEPACSWVQIENSVHMFVADDDTHPKSGDIYRMWEEINMRIKKAGYVPNTAHVLLHI 553
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP--------------------FKYISEIK 404
+ +E+E LK+HSEK+A+AFA ++ +P FKY+S++
Sbjct: 554 NEQERETKLKYHSEKIALAFA------LINMPAGASIRIMKNIRICGDCHSAFKYVSKVF 607
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
REI+VRD +RFHHF G CSCGDYW
Sbjct: 608 KREIVVRDTNRFHHFSEGSCSCGDYW 633
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 120/241 (49%), Gaps = 2/241 (0%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+SL HMY K G++ + V MP R+V++W LIAG AQN + + + M FR
Sbjct: 99 NSLIHMYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFR 158
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P+ TF S++ + G+Q+HA VK DV V S+L+ MY+RC +D ++
Sbjct: 159 PNGFTFTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMV 218
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F + V W+++IA + GE + F +M++ F A T+ S+ A + G
Sbjct: 219 FDRLVSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGAL 278
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
E+G ++K ++ T ++ + + G + +A + M K + + W T+L+
Sbjct: 279 EQGRWVHAHLIKSGQKLTAFVGNT-MLGMYAKSGSMVDARKVFDRMD-KRDLVTWNTMLT 336
Query: 250 A 250
A
Sbjct: 337 A 337
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 94/194 (48%), Gaps = 2/194 (1%)
Query: 57 LDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISM 116
L + +L+ P + S+I++C++ L + IHA + ++ + D +++SLI M
Sbjct: 45 LRELDLLHAGELAPTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHM 104
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
Y +CG + D+ F + DVV W+ +IA Y + EAI L M + F N TF
Sbjct: 105 YCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTF 164
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
SLL A CG G + L V KY + + ++D+ RC +D A ++ +
Sbjct: 165 TSLLKATGACGGCSIGEQMHALAV-KYNWDEDVYVGSALLDMYARCEQMD-MAIMVFDRL 222
Query: 237 VKANAIIWKTLLSA 250
V N + W L++
Sbjct: 223 VSKNEVSWNALIAG 236
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 76/152 (50%), Gaps = 1/152 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +L G+++ MY KSGS+V+ KV M R+++ W T++ AQ GL ++ + +
Sbjct: 292 GQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHF 351
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+R G + ++ITF+SV+++CS + +G+ + ++ S + + R
Sbjct: 352 EEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYVSFVDLLGRA 411
Query: 121 GCLDDS-VKTFLECEYSDVVLWSSMIAAYGFH 151
G L ++ + F +W +++ A H
Sbjct: 412 GLLKEALIFVFKMPMEPTAAVWGALLGACRMH 443
>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
Length = 1408
Score = 327 bits (838), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 177/473 (37%), Positives = 259/473 (54%), Gaps = 48/473 (10%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ D+ G+SL MY+K+ SL + V M RN+ AW +L++G + G+ ED L
Sbjct: 941 GFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLL 1000
Query: 61 NLMRMVGFRPDKITFVSVIS------------------------SCSELATLGQGQQIHA 96
N M G +PD +T+ +IS +C+ L+ L +G++IH
Sbjct: 1001 NQMEKEGIKPDLVTWNGMISGYAMWGCARKAFMPNSASITCLLRACASLSLLQKGKEIHC 1060
Query: 97 EVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEE 156
++ G DV V ++LI MYS+ L ++ K F + + W+ MI + G G+E
Sbjct: 1061 LSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKE 1120
Query: 157 AINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVV 216
AI++F +M++ + +TF +LL AC + GL +G ++FD M+ YR PRLEHY C+V
Sbjct: 1121 AISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMV 1180
Query: 217 DLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAA 276
DLLGR GYLDEA LI MP+K +A IW LL +C+ HK+ A A+ + + P ++A
Sbjct: 1181 DLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLXFAETAAKNLFKLEPNNSA 1240
Query: 277 PYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSME 336
Y+L+ N+++ RW+ + RE M V+ SW++I +VH F+ +K HP + +
Sbjct: 1241 NYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGK 1300
Query: 337 IDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVML- 395
I L +L SEMK GYVPD +MD EK+ L H+EKLAI + GLI M
Sbjct: 1301 IYFELYQLVSEMKKLGYVPDVNCVYQNMDEVEKQKILLSHTEKLAITY-----GLIKMKA 1355
Query: 396 --PF----------------KYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
P KYIS +K RE+ +RD RFHHFR GKCSC D+W
Sbjct: 1356 GEPIRVIKNTRICSDCHSAAKYISLVKARELFLRDGVRFHHFREGKCSCNDFW 1408
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 115/275 (41%), Gaps = 57/275 (20%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
+++ W L++G +G E+VL+ M+ GF+P+ + SV+ + SEL L G++ H
Sbjct: 875 DIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETH 934
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGE 155
V++ G DV V +SLI MY + L + F + ++ W+S+++ Y F G E
Sbjct: 935 GYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFE 994
Query: 156 EAINLFEQMEQ------------------------KEFEANDVTFVSLLYACSHCGLKEK 191
+A+ L QME+ K F N + LL AC+ L +K
Sbjct: 995 DALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAFMPNSASITCLLRACASLSLLQK 1054
Query: 192 GMEFFDLMV----------------------------KKYRR--KPRLEHYTCVVDLLGR 221
G E L + K +RR L + C++
Sbjct: 1055 GKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAI 1114
Query: 222 CGYLDEAAALIRNMP---VKANAIIWKTLLSACKT 253
G EA ++ M V +AI + LLSACK
Sbjct: 1115 FGLGKEAISVFNEMQKVGVGPDAITFTALLSACKN 1149
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 123/287 (42%), Gaps = 41/287 (14%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+LD+ +L + Y + L + +V MP + W I Q+ + ++ +
Sbjct: 704 GFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELF 763
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR- 119
M+ + + T V V+ +C ++ L +QIH V + G DV + + LISMYS+
Sbjct: 764 RKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKN 823
Query: 120 ------------------------------CGCLDDSVKTFLECEYS----DVVLWSSMI 145
G L+D+ F E E S D+V W+ ++
Sbjct: 824 GKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLL 883
Query: 146 AAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRR 205
+ + HG EE +N+ ++M+ + F+ N + S+L A S G G E ++ R
Sbjct: 884 SGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVL---RN 940
Query: 206 KPRLEHY--TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+ Y T ++D+ + L A A+ NM + N W +L+S
Sbjct: 941 GFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNR-NIFAWNSLVSG 986
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 80/181 (44%), Gaps = 1/181 (0%)
Query: 8 AGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAG-KAQNGLAEDVLDQYNLMRMV 66
A +L Y+ G V + RN + W + + K+ G VL+ + +
Sbjct: 609 AAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGK 668
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
G D + + +C+ + + G +IH ++K G LDV + +L++ Y RC L+ +
Sbjct: 669 GVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKA 728
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHC 186
+ F E + +LW+ I K ++ + LF +M+ +A T V +L AC
Sbjct: 729 NQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKM 788
Query: 187 G 187
G
Sbjct: 789 G 789
>gi|77553706|gb|ABA96502.1| SEC14 cytosolic factor, putative [Oryza sativa Japonica Group]
gi|125535837|gb|EAY82325.1| hypothetical protein OsI_37535 [Oryza sativa Indica Group]
gi|125578563|gb|EAZ19709.1| hypothetical protein OsJ_35285 [Oryza sativa Japonica Group]
Length = 630
Score = 327 bits (838), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 165/441 (37%), Positives = 265/441 (60%), Gaps = 24/441 (5%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G++ +Y K + + V MP + + W +L AG QNGL E+VL + + G
Sbjct: 195 GTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAGFVQNGLHEEVLCLFQSTQREGM 254
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
+ + T S++S+C+ LA + +G Q+HA +VK G ++ V +SL+ +Y++CG ++ S +
Sbjct: 255 QLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHRNLFVATSLVDVYAKCGQIEKSYE 314
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F + E +VVLW++MIA++ H EA+ LFE+M+Q N+VT++S+L ACSH GL
Sbjct: 315 VFADMEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQVGIFPNEVTYLSILSACSHTGL 374
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
E+G +F+L++ +P + HY+C+VD+LGR G DEA L+ MP + A +W +LL
Sbjct: 375 VEEGRHYFNLLLSDRTAEPNVLHYSCMVDVLGRSGKTDEAWKLLDKMPFEPTASMWGSLL 434
Query: 249 SACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKK 308
+ + HK+ +A AE++ + P++ +VLLSN++A++ W+ V R+ +R+ KK
Sbjct: 435 GSSRIHKNIRLARIAAEQLFRLEPENGGNHVLLSNVYAASGNWENVVVARKYLRDSGAKK 494
Query: 309 EPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEE 368
E G SW+E K ++H F G++ HP ++ LEE+ EM+ + +T D+HD+ +++
Sbjct: 495 EMGRSWIEAKGKIHVFVAGEREHPGITDVYNKLEEIYHEMRKISHRANTQCDLHDVHADQ 554
Query: 369 KEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREII 409
KE LKHHSEKLA AF GLI + P K +S I R++I
Sbjct: 555 KEELLKHHSEKLAFAF-----GLISLPPNIPITIYKNLRICGDCHSFMKIVSCITERQVI 609
Query: 410 VRDASRFHHFRNGKCSCGDYW 430
VRD +RFHHF++G CSCGD+W
Sbjct: 610 VRDINRFHHFKDGSCSCGDFW 630
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 147/315 (46%), Gaps = 8/315 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D V + L ++Y K G +V M +R++I+W T+IAG N + L +
Sbjct: 86 GLVTDTVTCNILINLYTKCGQNDCARRVFDAMSVRSIISWNTMIAGYTHNREDVEALKLF 145
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M G + + T S + +C+ + + +Q+H +K V ++ + +Y++C
Sbjct: 146 SRMHREGTQMTEFTLSSTLCACAAKYAIIECKQLHTIAIKLALDSSSFVGTAFLDVYAKC 205
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
+ D+ F V WSS+ A + +G EE + LF+ +++ + + T S+L
Sbjct: 206 NMIKDACWVFENMPEKTSVTWSSLFAGFVQNGLHEEVLCLFQSTQREGMQLTEFTVSSIL 265
Query: 181 YACSHCGLKEKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
C+ L +G + ++VK + R L T +VD+ +CG ++++ + +M K
Sbjct: 266 STCASLALIIEGTQVHAVIVKHGFHRN--LFVATSLVDVYAKCGQIEKSYEVFADMEEK- 322
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLSNIHASAKRWQGVSEF 297
N ++W ++++ H + A + E++ +G+ P + +LS + +G F
Sbjct: 323 NVVLWNAMIASFSRHAHSWEAMILFEKMQQVGIFPNEVTYLSILSACSHTGLVEEGRHYF 382
Query: 298 REAMRERNVKKEPGV 312
+ +R EP V
Sbjct: 383 NLLLSDRTA--EPNV 395
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 87/190 (45%), Gaps = 2/190 (1%)
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
NL+R+ D T ++ C++ +L G+ H + G D + LI++Y++C
Sbjct: 45 NLVRVERDLIDVFTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKC 104
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G D + + F ++ W++MIA Y + + EA+ LF +M ++ + + T S L
Sbjct: 105 GQNDCARRVFDAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTL 164
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+ + + + +K T +D+ +C + +A + NMP K
Sbjct: 165 CACAAKYAIIECKQLHTIAIKLALDSSSFVG-TAFLDVYAKCNMIKDACWVFENMPEK-T 222
Query: 241 AIIWKTLLSA 250
++ W +L +
Sbjct: 223 SVTWSSLFAG 232
>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 786
Score = 327 bits (838), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 168/444 (37%), Positives = 266/444 (59%), Gaps = 17/444 (3%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
+L + ++L Y+K G + + + + + R+V+AW +I G Q+G + ++ +
Sbjct: 344 DLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRS 403
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M G RP+ T +++S S LA+L G+QIH VK+G V V ++LI+MY++ G
Sbjct: 404 MVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGN 463
Query: 123 LDDSVKTF--LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
+ + + F + CE D V W+SMI A HG EEA+ LFE M + + +T+V +
Sbjct: 464 ITSASRAFDLIRCE-RDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVF 522
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+H GL +G ++FD+M + P L HY C+VDL GR G L EA I MP++ +
Sbjct: 523 SACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPD 582
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+ W +LLSAC+ HK+ D+ AE +L + P+++ Y L+N++++ +W+ ++ R++
Sbjct: 583 VVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKS 642
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M++ VKKE G SW+E+K++VH F + D +HP EI + ++++ E+K GYVPDT +
Sbjct: 643 MKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASV 702
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA----EHTRGLIVM----------LPFKYISEIKNR 406
+HD++ E KE L+HHSEKLAIAF L +M K+IS++ R
Sbjct: 703 LHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGR 762
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EIIVRD +RFHHF++G CSC DYW
Sbjct: 763 EIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 134/311 (43%), Gaps = 38/311 (12%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN-LM 63
D+ + +++ ++M+ G + M R+++ W ++I+G Q G LD ++ ++
Sbjct: 211 DISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKML 270
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG-- 121
R PD+ T SV+S+C+ L L G+QIH+ +V G + V+++LISMYSRCG
Sbjct: 271 RDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGV 330
Query: 122 ----------------------CLDDSVK---------TFLECEYSDVVLWSSMIAAYGF 150
LD +K F+ + DVV W++MI Y
Sbjct: 331 ETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQ 390
Query: 151 HGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLE 210
HG EAINLF M N T ++L S G + VK +
Sbjct: 391 HGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYS-VS 449
Query: 211 HYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL-- 268
++ + + G + A+ + + + + W +++ A H + A + E +L
Sbjct: 450 VSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLME 509
Query: 269 GVNPQDAAPYV 279
G+ P D YV
Sbjct: 510 GLRP-DHITYV 519
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 103/212 (48%), Gaps = 7/212 (3%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y K G + + +P R+ ++W T+I G G + M G P + T
Sbjct: 90 YSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTL 149
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
+V++S + + G+++H+ +VK G +V V +SL++MY++CG + F
Sbjct: 150 TNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVV 209
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
D+ W++MIA + G+ + A+ FEQM +++ VT+ S++ + G + ++
Sbjct: 210 RDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI----VTWNSMISGFNQRGYDLRALDI 265
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDE 227
F M++ P + +T + +L C L++
Sbjct: 266 FSKMLRDSLLSP--DRFT-LASVLSACANLEK 294
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 56/112 (50%), Gaps = 4/112 (3%)
Query: 91 GQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGF 150
Q +H V+K+G V ++++L+++YS+ G + K F E W+++++AY
Sbjct: 33 AQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSK 92
Query: 151 HGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKK 202
G + F+Q+ Q++ V++ +++ + G K + MVK+
Sbjct: 93 RGDMDSTCEFFDQLPQRD----SVSWTTMIVGYKNIGQYHKAIRVMGDMVKE 140
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
Query: 111 SSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFE 170
++++S YS+ G +D + + F + D V W++MI Y G+ +AI + M ++ E
Sbjct: 84 NTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIE 143
Query: 171 ANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCG 223
T ++L + + E G + +VK R + ++++ +CG
Sbjct: 144 PTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLR-GNVSVSNSLLNMYAKCG 195
>gi|226492710|ref|NP_001145953.1| uncharacterized protein LOC100279479 [Zea mays]
gi|219885099|gb|ACL52924.1| unknown [Zea mays]
Length = 530
Score = 327 bits (838), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 164/446 (36%), Positives = 256/446 (57%), Gaps = 27/446 (6%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ GS+L MY + + V + +N ++W LIAG A+ E L ++ M+
Sbjct: 92 DVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGETTLMKFAEMQ 151
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
GF T+ S+ S+ + + L QG+ +HA ++K+G L V ++++ MY++ G +
Sbjct: 152 RNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMV 211
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D+ K F + D+V W++M+ A +G G+EA+ FE++ + + N +TF+S+L ACS
Sbjct: 212 DARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACS 271
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL ++G +FD+M K Y +P ++HY VDLLGR G L EA + MP++ A +W
Sbjct: 272 HGGLVKEGKHYFDMM-KDYNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVW 330
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
LL AC+ HK+ M A+ + ++P D P VLL NI+AS +W + R+ M+
Sbjct: 331 GALLGACRMHKNAKMGQYAADHVFELDPDDTGPPVLLYNIYASTGKWNDAARVRKMMKAT 390
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
VKKEP SW++I+N VH F D +HP+S +I EE+ +K GYVP+T + +
Sbjct: 391 GVKKEPACSWVQIENSVHMFVADDDTHPKSGDIYRMWEEINMRIKKAGYVPNTAHVLLHI 450
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP--------------------FKYISEIK 404
+ +E+E LK+HSEK+A+AFA ++ +P FKY+S++
Sbjct: 451 NEQERETKLKYHSEKIALAFA------LINMPAGASIRIMKNIRICGDCHSAFKYVSKVF 504
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
REI+VRD +RFHHF G CSCGDYW
Sbjct: 505 KREIVVRDTNRFHHFSEGSCSCGDYW 530
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 116/236 (49%), Gaps = 2/236 (0%)
Query: 15 MYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKIT 74
MY K G++ + V MP R+V++W LIAG AQN + + + M FRP+ T
Sbjct: 1 MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 60
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
F S++ + G+Q+HA VK DV V S+L+ MY+RC +D ++ F
Sbjct: 61 FTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLV 120
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGME 194
+ V W+++IA + GE + F +M++ F A T+ S+ A + G E+G
Sbjct: 121 SKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRW 180
Query: 195 FFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
++K ++ T ++ + + G + +A + M K + + W T+L+A
Sbjct: 181 VHAHLIKSGQKLTAFVGNT-MLGMYAKSGSMVDARKVFDRMD-KRDLVTWNTMLTA 234
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 76/152 (50%), Gaps = 1/152 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +L G+++ MY KSGS+V+ KV M R+++ W T++ AQ GL ++ + +
Sbjct: 189 GQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHF 248
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+R G + ++ITF+SV+++CS + +G+ + ++ S + + R
Sbjct: 249 EEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYVSFVDLLGRA 308
Query: 121 GCLDDS-VKTFLECEYSDVVLWSSMIAAYGFH 151
G L ++ + F +W +++ A H
Sbjct: 309 GLLKEALIFVFKMPMEPTAAVWGALLGACRMH 340
>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
Length = 941
Score = 327 bits (837), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 165/447 (36%), Positives = 255/447 (57%), Gaps = 25/447 (5%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
LDL+ + L +Y + G + + + +++++W ++I NG + + M
Sbjct: 500 LDLILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNNGRLNGAVFLFTEM 559
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
+ +PD + VS++ + + L++L +G+Q+H +++ ++ V+SSL+ MYS CG +
Sbjct: 560 QKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPVVSSLVDMYSGCGSM 619
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
+ +++ F + DVVLW++MI A G HG G++AI+LF++M Q + V+F++LLYAC
Sbjct: 620 NYAIRVFERAKCKDVVLWTAMINATGMHGHGKQAIDLFKRMLQTGLTPDHVSFLALLYAC 679
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
SH L E+G + D+MV KYR KP EHY CVVD+LGR G +EA I+ MP+ + +
Sbjct: 680 SHSKLVEEGKHYLDIMVSKYRLKPWQEHYACVVDILGRSGQTEEAYEFIKTMPMDPKSAV 739
Query: 244 WKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
W LL AC+ H++ +A A ++L + P + Y+L+SN+ A +W E R M E
Sbjct: 740 WCALLGACRVHRNYGLAVVAANKLLELEPDNPGNYILVSNVFAEMGKWNNAKETRTRMAE 799
Query: 304 RNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLR-GYVPDTGADMH 362
R ++K P SW+EI N +H FT GD H S I L L E+T ++ GYV DT +H
Sbjct: 800 RGLRKNPACSWIEIGNNIHTFTSGDYCHRDSEAIHLKLSEITEMLRREGGYVEDTRFVLH 859
Query: 363 DMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEI 403
D EEK L HSE++AIAF GLI P K +S++
Sbjct: 860 DTSEEEKIDMLHKHSERIAIAF-----GLISTRPGMPIRIAKNLRVCGDCHEFTKLVSKL 914
Query: 404 KNREIIVRDASRFHHFRNGKCSCGDYW 430
R+I+VRDA+RFHHF G CSC D+W
Sbjct: 915 FERDIVVRDANRFHHFSGGSCSCEDFW 941
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 135/258 (52%), Gaps = 6/258 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMP--IRNVIAWITLIAGKAQNGLAEDVLD 58
G + + ++L MY K G L +V + R+V +W ++++G QNG + L
Sbjct: 194 GLDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALA 253
Query: 59 QYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
+ M+ GF + T V+V+ C+EL L G+++HA ++K G+ L++ ++L+ MY+
Sbjct: 254 LFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSELNIQC-NALLVMYA 312
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+ G +D +++ F + D + W+SM++ Y + EAI+ F +M Q F+ + VS
Sbjct: 313 KYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVS 372
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
L A H G EF +K+ R L+ ++D+ +CG ++ +A + +M ++
Sbjct: 373 LSSALGHLSRLNNGREFHAYAIKQ-RLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIR 431
Query: 239 ANAIIWKTLLSACKTHKS 256
+ I W T+L AC S
Sbjct: 432 -DHISWTTIL-ACFAQSS 447
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 5/202 (2%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D + L MY + G + + ++ MP R V +W L+ +G A + + Y MR
Sbjct: 94 DGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAMR 153
Query: 65 MV---GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
G PD T SV+ +C G ++H VK G V ++LI MY++CG
Sbjct: 154 ASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKCG 213
Query: 122 CLDDSVKTF--LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
LD +++ F L+ + DV W+S+++ +G+ EA+ LF M+ F N T V++
Sbjct: 214 LLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAV 273
Query: 180 LYACSHCGLKEKGMEFFDLMVK 201
L C+ GL G E ++K
Sbjct: 274 LQVCAELGLLSLGRELHAALLK 295
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 133/275 (48%), Gaps = 8/275 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G EL++ + L MY K G + +V + ++ I+W ++++ QN + +D +
Sbjct: 297 GSELNIQCNALLV-MYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFF 355
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M GF+PD VS+ S+ L+ L G++ HA +K D+ V ++L+ MY +C
Sbjct: 356 GEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKC 415
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ S K F D + W++++A + + EA+ + +++++ + + S+L
Sbjct: 416 GSIECSAKVFESMGIRDHISWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSIL 475
Query: 181 YACSHCGLKEKGM--EFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
C CGLK + + ++ LE+ ++D+ G CG D + L + + K
Sbjct: 476 ETC--CGLKSISLLKQVHCYAIRNGLLDLILENR--LIDIYGECGEFDHSLNLFQRVE-K 530
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQ 273
+ + W ++++ C + + A + E+ N Q
Sbjct: 531 KDIVSWTSMINCCTNNGRLNGAVFLFTEMQKANIQ 565
>gi|224125332|ref|XP_002329779.1| predicted protein [Populus trichocarpa]
gi|222870841|gb|EEF07972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 327 bits (837), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 175/445 (39%), Positives = 264/445 (59%), Gaps = 15/445 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF LD+ ++L +Y K G L+ KV + R+++AW ++I+G QNG A++ + +
Sbjct: 141 GFGLDVYVQAALVALYGKCGDLINARKVFDKIRERSIVAWNSMISGYEQNGFAKEAIGLF 200
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M+ G PD TFVSV+S+C+ L G +H +V G L+V + +SLI+MY RC
Sbjct: 201 DRMKETGVEPDSATFVSVLSACAHLGAFSLGCWVHEYIVGNGLDLNVVLGTSLINMYIRC 260
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + + F + +VV W++MI+ YG +G G +A+ LF +M + N +TFV++L
Sbjct: 261 GNVSKAREVFDSMKERNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLFPNSITFVAVL 320
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIR-NMPVKA 239
AC+H GL +G F + ++Y P +EH C+VD+LGR G LDEA I+ +P
Sbjct: 321 SACAHAGLVNEGRRLFASIREEYHLVPGVEHNVCLVDMLGRAGLLDEAYNFIKEEIPENP 380
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
I +L ACK HK+ D+ ++AE +L P++ A YV+LSNI+A A R V R
Sbjct: 381 APAILTAMLGACKMHKNFDLGAQVAEHLLAAEPENPAHYVILSNIYALAGRMDQVEIVRN 440
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M + +KK+ G S +E+ + + F+MGDKSH + I YL+EL + GYVP + +
Sbjct: 441 NMIRKCLKKQVGYSTVEVDQKTYLFSMGDKSHSETNAIYHYLDELMWKCSEAGYVPVSDS 500
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKN 405
MH+++ EE+EY L++HSEKLAIAF + + G + + K+IS I +
Sbjct: 501 VMHELEEEEREYALRYHSEKLAIAFGLLKTSHGTPIRIVKNLRMCEDCHSAIKFISAISS 560
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
REIIVRD RFHHF+ G CSC DYW
Sbjct: 561 REIIVRDKLRFHHFKVGSCSCLDYW 585
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 133/259 (51%), Gaps = 3/259 (1%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQN-GLAEDVLDQYNLMRMVGF 68
+ L ++ +GS+ ++ +P + + +LI +++ + L Y+ M +
Sbjct: 48 TKLLNLACAAGSISYTRQIFLAVPNPDSFLFTSLIKSTSKSHNFSIYSLYFYSRMVLSNV 107
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
P TF SVI SC++L+ L G+ +H V+ G LDV V ++L+++Y +CG L ++ K
Sbjct: 108 SPSNYTFTSVIKSCADLSALKHGRVVHGHVLVHGFGLDVYVQAALVALYGKCGDLINARK 167
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F + +V W+SMI+ Y +G +EAI LF++M++ E + TFVS+L AC+H G
Sbjct: 168 VFDKIRERSIVAWNSMISGYEQNGFAKEAIGLFDRMKETGVEPDSATFVSVLSACAHLGA 227
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
G + +V + T ++++ RCG + +A + +M + N + W ++
Sbjct: 228 FSLGCWVHEYIVGN-GLDLNVVLGTSLINMYIRCGNVSKAREVFDSMKER-NVVAWTAMI 285
Query: 249 SACKTHKSTDMAGRIAEEI 267
S T+ A + E+
Sbjct: 286 SGYGTNGYGSQAVELFHEM 304
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 327 bits (837), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 168/451 (37%), Positives = 257/451 (56%), Gaps = 26/451 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF L ++L +Y K G + + + ++V++W TLI G L ++ L +
Sbjct: 230 GFSSSLKIVNALIDLYSKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLF 289
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA--GASLDVGVISSLISMYS 118
M G P+ +T +SV+ +C+ L + G+ IH + K G + + + +SLI MY+
Sbjct: 290 QEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYA 349
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+CG ++ + + F Y + W++MI + HG+ A +LF +M E +D+TFV
Sbjct: 350 KCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVG 409
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
LL ACSH GL + G + F M + Y P+LEHY C++DLLG G EA +I MP++
Sbjct: 410 LLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPME 469
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
+ +IW +LL ACK H + ++A A++++ + P+++ YVLLSNI+A+A RW+ V+ R
Sbjct: 470 PDGVIWCSLLKACKKHGNLELAESFAQKLIKIEPENSGSYVLLSNIYATAGRWEDVARVR 529
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
+ + +KK PG S +E+ + VH+F +GDK HPR EI LEE+ +++ G+ PDT
Sbjct: 530 GVLNGKGMKKVPGCSSIEVDSVVHEFIIGDKLHPRRREIYHMLEEMDVQLEEAGFAPDTS 589
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKY 399
+ +M+ E KE L+HHSEKLAIAF GLI P K
Sbjct: 590 EVLQEMEEEWKEGALRHHSEKLAIAF-----GLISTKPGTKLTIVKNLRVCRNCHEATKL 644
Query: 400 ISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
IS+I REI+ RD +RFHHFR+G CSC DYW
Sbjct: 645 ISKIYKREIVARDRTRFHHFRDGVCSCCDYW 675
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 152/311 (48%), Gaps = 12/311 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+V+ ++L Y G KV + R+V++W +I G +NG E+ L+ + M
Sbjct: 129 DVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMM 188
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA----GASLDVGVISSLISMYSRC 120
RPD+ T VSV+S+C++ ++ G+Q+H+ V G S + ++++LI +YS+C
Sbjct: 189 RTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKC 248
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ + F DVV W+++I Y +EA+ LF++M + NDVT +S+L
Sbjct: 249 GDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVL 308
Query: 181 YACSHCGLKEKGM---EFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
AC+H G + G + D +K + L T ++D+ +CG ++ A + +M
Sbjct: 309 PACAHLGAIDIGRWIHVYIDKKLKGVTNETSLR--TSLIDMYAKCGDIEAAHQVFNSMLY 366
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRIAEEILG--VNPQDAAPYVLLSNIHASAKRWQGVS 295
++ + W ++ H + A + + G V P D LLS S G
Sbjct: 367 RSLS-SWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQ 425
Query: 296 EFREAMRERNV 306
F+ ++ N+
Sbjct: 426 IFKSMTQDYNL 436
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 133/289 (46%), Gaps = 40/289 (13%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
N++ W T++ G A + L+ Y M +G P+ +F ++ SC++ +G+QIH
Sbjct: 28 NLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAKSKAFEEGRQIH 87
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDD------------------------------ 125
A+V+K G LD V +SLISMY+R G L+D
Sbjct: 88 AQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTALITGYASRGDFR 147
Query: 126 -SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ K F E DVV W++MI Y +G+ EEA+ LF++M + ++ T VS++ AC+
Sbjct: 148 SARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTLVSVVSACA 207
Query: 185 HCGLKEKGME---FFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
G E G + + D + L+ ++DL +CG ++ A L + K +
Sbjct: 208 QSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLFEGLSCK-DV 266
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASA 288
+ W TL+ A + +E+L G P D LLS + A A
Sbjct: 267 VSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDV---TLLSVLPACA 312
>gi|302765332|ref|XP_002966087.1| hypothetical protein SELMODRAFT_84768 [Selaginella moellendorffii]
gi|300166901|gb|EFJ33507.1| hypothetical protein SELMODRAFT_84768 [Selaginella moellendorffii]
Length = 449
Score = 327 bits (837), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 168/440 (38%), Positives = 255/440 (57%), Gaps = 24/440 (5%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L +MY++ GSL E KV M + +W +I +N + L+ ++ M + G
Sbjct: 15 NALLNMYVRCGSLEEARKVFDAMDHPDAFSWTNMITACTENCELLEALELFHRMNLEGIP 74
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P +T SV+++C+ L G+QIH+ + +G V ++L+ MY++CG L+ S K
Sbjct: 75 PTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSLECSSKV 134
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F E + V W++MIAA HG+G+EA+ LF++M + A+ TF+ +L ACSH GL
Sbjct: 135 FTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLRACSHAGLI 194
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
++ +EFF MV+ Y P HY +D +GR G L +A LI +MP + WKTLL+
Sbjct: 195 KESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHPETVTWKTLLN 254
Query: 250 ACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKE 309
AC+ H + A ++AE + + P+D+ Y LL N++A+ +R+ R++M +R +KK
Sbjct: 255 ACRIHSQAERATKVAELLAKLAPEDSMAYTLLGNVYAATERYGDQMRVRKSMTDRGLKKV 314
Query: 310 PGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEK 369
PG S++E+KN+VH+F GD++HP EI L LE+L M+ GYVP+T +H ++ EEK
Sbjct: 315 PGKSFIEVKNKVHEFVAGDRAHPSRDEILLELEKLGGRMREAGYVPNTKDVLHAVNEEEK 374
Query: 370 EYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREIIV 410
E + HSEKLAIAF GLI P K I++I R I+V
Sbjct: 375 EQLIGLHSEKLAIAF-----GLIATPPGTPLLIVKNLRVCSDCHAATKVIAKIMRRRIVV 429
Query: 411 RDASRFHHFRNGKCSCGDYW 430
RD RFHHF +G+CSC DYW
Sbjct: 430 RDTHRFHHFEDGQCSCKDYW 449
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 81/169 (47%), Gaps = 4/169 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF ++A ++L MY K GSL KV M RN ++W +IA AQ+G ++ L+ +
Sbjct: 107 GFHSSVLAQTALLDMYAKCGSLECSSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELF 166
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVK--AGASLDVGVISSLISMYS 118
M + G D TF+ V+ +CS + + + +V+ A A + +L ++
Sbjct: 167 KEMNLEGMVADATTFICVLRACSHAGLIKESLEFFHSMVEDYAIAPTETHYCRALDTI-G 225
Query: 119 RCGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQ 166
R G L D+ + + + V W +++ A H + E A + E + +
Sbjct: 226 RAGRLQDAEELIHSMPFHPETVTWKTLLNACRIHSQAERATKVAELLAK 274
>gi|357141490|ref|XP_003572243.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Brachypodium distachyon]
Length = 884
Score = 327 bits (837), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 170/443 (38%), Positives = 256/443 (57%), Gaps = 17/443 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D + +SL Y G KV M +++ +AW LI A+N +D L ++ MR
Sbjct: 442 DSLLATSLMRSYAICGVGDCARKVFDEMVMKDTVAWNVLITCYARNKRTKDTLWLFDEMR 501
Query: 65 M--VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
+PD++T + ++ +C+ L L G+QI V+ G ++ V +S+I+MY+RCGC
Sbjct: 502 RGESEVKPDEVTCILLLQACTSLGALDFGEQIWEYAVEHGYGCELKVRNSVITMYTRCGC 561
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
++ + + F VV WS+MI +G GE+AI+ FE+M + + TF +L A
Sbjct: 562 VEKAYQVFCHTPQKSVVTWSAMIMGLAANGFGEDAISAFEEMSRSGVVPDGQTFTGVLSA 621
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALI-RNMPVKANA 241
CSH GL ++G FFD+M +Y+ P + HY C+VDL+GR G LDEA L+ + M V +A
Sbjct: 622 CSHSGLVDEGFRFFDMMRYEYKMMPNVRHYGCIVDLMGRAGLLDEAYELVVKEMKVAPDA 681
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
IW+TLL AC+ H D+ ++ ++ + Q A YVLL N +A+A W+ V+E R+ M
Sbjct: 682 TIWRTLLGACRIHGHVDLGEKVISHLIELKAQQAGDYVLLLNTYAAAGDWEKVAEVRKLM 741
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
RE ++ PG + +E+ ++H+F D SHPR EI L+E+ +++ GYVP +D+
Sbjct: 742 RENEIQTTPGCTTVELNGELHEFIADDASHPRKAEIYGKLDEINRHLRIAGYVPHVSSDL 801
Query: 362 HDMDSEEKEYNLKHHSEKLAIAF-------------AEHTRGLIVMLPF-KYISEIKNRE 407
HD+DSE KE L +HSEKLAIAF A++ R + F K S + NR
Sbjct: 802 HDLDSEGKECALTYHSEKLAIAFALLVMPQRRPIRLAKNLRVCVDCHNFTKVFSGVYNRL 861
Query: 408 IIVRDASRFHHFRNGKCSCGDYW 430
+IVRD +RFHHF G+CSC DYW
Sbjct: 862 VIVRDRTRFHHFNGGQCSCNDYW 884
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 97/196 (49%), Gaps = 7/196 (3%)
Query: 55 DVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLI 114
D L MR +G R + + ++ C TL +Q+HA VV G D + +SL+
Sbjct: 394 DALSFLRRMRTLGRRGNAFSLAILLKPCR---TLSHARQLHANVVIEGHLRDSLLATSLM 450
Query: 115 SMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFE--AN 172
Y+ CG D + K F E D V W+ +I Y + + ++ + LF++M + E E +
Sbjct: 451 RSYAICGVGDCARKVFDEMVMKDTVAWNVLITCYARNKRTKDTLWLFDEMRRGESEVKPD 510
Query: 173 DVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALI 232
+VT + LL AC+ G + G + ++ V ++ L+ V+ + RCG +++A +
Sbjct: 511 EVTCILLLQACTSLGALDFGEQIWEYAV-EHGYGCELKVRNSVITMYTRCGCVEKAYQVF 569
Query: 233 RNMPVKANAIIWKTLL 248
+ P K+ + W ++
Sbjct: 570 CHTPQKS-VVTWSAMI 584
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 97/206 (47%), Gaps = 12/206 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ +L +S+ MY + G + + +V P ++V+ W +I G A NG ED + +
Sbjct: 541 GYGCELKVRNSVITMYTRCGCVEKAYQVFCHTPQKSVVTWSAMIMGLAANGFGEDAISAF 600
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASL--DVGVISSLISMYS 118
M G PD TF V+S+CS + +G + ++++ + +V ++ +
Sbjct: 601 EEMSRSGVVPDGQTFTGVLSACSHSGLVDEGFRFF-DMMRYEYKMMPNVRHYGCIVDLMG 659
Query: 119 RCGCLDDSVKTFLE--CEYSDVVLWSSMIAAYGFHGK---GEEAINLFEQMEQKEFEAND 173
R G LD++ + ++ D +W +++ A HG GE+ I+ +E K +A D
Sbjct: 660 RAGLLDEAYELVVKEMKVAPDATIWRTLLGACRIHGHVDLGEKVISHL--IELKAQQAGD 717
Query: 174 VTFVSLLYACSHCGLKEKGMEFFDLM 199
+V LL + G EK E LM
Sbjct: 718 --YVLLLNTYAAAGDWEKVAEVRKLM 741
>gi|225435554|ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 624
Score = 327 bits (837), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 175/449 (38%), Positives = 265/449 (59%), Gaps = 29/449 (6%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
DL + + + Y+ SG + +++ M R+V++W T+IAG Q G ++ LD ++ M
Sbjct: 182 DLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEML 241
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G P++ T S +++C+ L L QG+ IH + K+ ++ +++SL+ MY++CG +D
Sbjct: 242 QTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEID 301
Query: 125 DSVKTFLECEYS---DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+ K F + EY V W++MI Y HGK +EAI+LFEQM+ ++ N VTFV+LL
Sbjct: 302 FAAKVFHD-EYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLN 360
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
ACSH L E+G +F M Y +P +EHY C+VDLLGR G L EA + NMP+ +A
Sbjct: 361 ACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPDA 420
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
IW LL AC+ HK + RI + I ++ +VLL+N+++++ +W R+ +
Sbjct: 421 TIWGALLGACRIHKDIERGQRIGKIIKELDSDHIGCHVLLANLYSASGQWDEAKAVRQKI 480
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
KK PG S +E+ HQF +GD+SHP++ ++ L+L+E+T+++K GYVP+ G +
Sbjct: 481 EVSGRKKTPGCSSIELNGVFHQFLVGDRSHPQTKQLYLFLDEMTTKLKNAGYVPEFGEVL 540
Query: 362 HDMDSEE-KEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
D+D EE KE L HSEKLAIAF GLI P K+IS
Sbjct: 541 LDIDDEEDKETALSKHSEKLAIAF-----GLINTPPGTAIRIVKNLRVCADCHEATKFIS 595
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
++ REIIVRD R+HHF++G CSC DYW
Sbjct: 596 KVYKREIIVRDRIRYHHFKDGFCSCKDYW 624
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 127/299 (42%), Gaps = 37/299 (12%)
Query: 20 GSLVEGEKVIRLMPIRNVIAWITLIAGKA--QNGLAEDVLDQYNLMRMVGFRPDKITFVS 77
GSL ++ +P +V + T+I A + +++R+ GF P++ TFV
Sbjct: 63 GSLSYAHQLFDQIPKPDVFIYNTMIKAHAVIPTSSHNSMRIFLSMVRVSGFLPNRYTFVF 122
Query: 78 VISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT-------- 129
V +C + +G+QI +K G ++ V +++I MY+ G +D++ +
Sbjct: 123 VFKACGNGLGVLEGEQIRVHAIKIGLESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQD 182
Query: 130 -----------------------FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQ 166
F E DVV W+++IA Y G +EA++LF +M Q
Sbjct: 183 LYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQ 242
Query: 167 KEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLD 226
N+ T S L AC++ ++G + + + K K ++D+ +CG +D
Sbjct: 243 TGPPPNEFTLASALAACANLVALDQG-RWIHVYIDKSEIKMNERLLASLLDMYAKCGEID 301
Query: 227 EAAALIRN-MPVKANAIIWKTLLSACKTHKSTDMAGRIAEE--ILGVNPQDAAPYVLLS 282
AA + + +K W ++ H + A + E+ + V+P LL+
Sbjct: 302 FAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLN 360
>gi|357131283|ref|XP_003567268.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Brachypodium distachyon]
Length = 654
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 174/447 (38%), Positives = 259/447 (57%), Gaps = 18/447 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ L ++L Y K G + E V MP RNV++W +I A+N D ++ +
Sbjct: 209 GYALHTHVATTLIDCYAKLGIVRYAESVFAAMPERNVVSWSAMIGCYAKNERPADAIELF 268
Query: 61 NLMRM--VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
M P+ IT VSV+++C+ + L G+ +HA +++ G V V+++L++MY
Sbjct: 269 KDMMASDADLVPNSITIVSVLNACAGVNALSHGKLLHAYILRRGFDSLVSVLNALMAMYM 328
Query: 119 RCGCLDDSVKTFLECEYS-DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
RCGCL+ F + DVV W+S+I+ YG HG G EA+ +FE+M F + +TF+
Sbjct: 329 RCGCLEVGRHIFKWIGHRRDVVSWNSLISGYGMHGFGPEAVQVFEEMIHVGFSPSIITFI 388
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
S+L ACSH GL +G F+ MV+ Y PR EHY C+VDLLGR G LDEA LIR+M +
Sbjct: 389 SVLGACSHAGLVNEGKMLFESMVE-YGVTPRAEHYACMVDLLGRAGQLDEAMELIRSMHI 447
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEF 297
+ + +W LL AC+ H + A + + P++A YVLL++I+A AK V
Sbjct: 448 EPSPQVWGALLGACRIHGHVEYAEIACSHLFDLEPRNAGNYVLLADIYARAKLHNQVGVL 507
Query: 298 REAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDT 357
+E + E ++K G SW+E+K ++H FT D +P ++ + E ++MK +GYVPDT
Sbjct: 508 KELLEEHALEKVTGCSWIEVKKKLHSFTSVDNKNPPVEQLQALIGEFVAQMKNQGYVPDT 567
Query: 358 GADMHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVMLP------------FKYISEI 403
G ++D++ EEKE L HSEKLA+AF G ++ + K+IS+
Sbjct: 568 GIVLYDIEGEEKERILIGHSEKLAVAFGLINTCSGEVIRITKNLRLCEDCHSVTKFISKF 627
Query: 404 KNREIIVRDASRFHHFRNGKCSCGDYW 430
REI+VRD +RFHHFR+G CSCGDYW
Sbjct: 628 TEREIVVRDVNRFHHFRDGVCSCGDYW 654
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 120/280 (42%), Gaps = 16/280 (5%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F D + L Y G+L +V P++N+ W L+ A ++ L +
Sbjct: 104 FRSDPFLSTRLIEAYAALGALPAARQVFDETPVKNIFVWNALLKALALADHGDEALARLA 163
Query: 62 LMRMVGFRPDKITFVSVISSC-----SELATLGQGQQIHAEVVKAGASLDVGVISSLISM 116
M +G D ++ + +C S + +++HA ++ G +L V ++LI
Sbjct: 164 DMGRLGVPVDSYSYTHGLKACIAVSASHAPASARVREVHAHAIRRGYALHTHVATTLIDC 223
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM--EQKEFEANDV 174
Y++ G + + F +VV WS+MI Y + + +AI LF+ M + N +
Sbjct: 224 YAKLGIVRYAESVFAAMPERNVVSWSAMIGCYAKNERPADAIELFKDMMASDADLVPNSI 283
Query: 175 TFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLL----GRCGYLDEAAA 230
T VS+L AC+ G ++ Y + + V++ L RCG L+
Sbjct: 284 TIVSVLNACAGVNALSHGK-----LLHAYILRRGFDSLVSVLNALMAMYMRCGCLEVGRH 338
Query: 231 LIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGV 270
+ + + + + + W +L+S H A ++ EE++ V
Sbjct: 339 IFKWIGHRRDVVSWNSLISGYGMHGFGPEAVQVFEEMIHV 378
>gi|334187432|ref|NP_196098.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635619|sp|Q9LZ19.2|PP364_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g04780
gi|332003400|gb|AED90783.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 635
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 167/447 (37%), Positives = 267/447 (59%), Gaps = 24/447 (5%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
+L+L G++L +Y K G + + +V M ++ + W +++AG QN E+ L Y
Sbjct: 194 DLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRR 253
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
+ + ++ T SVI +CS LA L +G+Q+HA + K+G +V V SS + MY++CG
Sbjct: 254 AQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGS 313
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
L +S F E + ++ LW+++I+ + H + +E + LFE+M+Q N+VTF SLL
Sbjct: 314 LRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSV 373
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
C H GL E+G FF LM Y P + HY+C+VD+LGR G L EA LI+++P A
Sbjct: 374 CGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTAS 433
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMR 302
IW +LL++C+ +K+ ++A AE++ + P++A +VLLSNI+A+ K+W+ +++ R+ +R
Sbjct: 434 IWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLR 493
Query: 303 ERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMH 362
+ +VKK G SW++IK++VH F++G+ HPR EI L+ L + + GY P ++H
Sbjct: 494 DCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELH 553
Query: 363 DMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPFKYISEIKN----------------- 405
D++ +KE L HSEKLA+ F GL+ + + +KN
Sbjct: 554 DVEIGKKEELLMQHSEKLALVF-----GLMCLPESSPVRIMKNLRICVDCHEFMKAASMA 608
Query: 406 --REIIVRDASRFHHFRNGKCSCGDYW 430
R IIVRD +RFHHF +G CSCGD+W
Sbjct: 609 TRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 138/283 (48%), Gaps = 4/283 (1%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
E D+ + L + Y K G + +V M R++++W T+I +N + + LD +
Sbjct: 92 LEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFL 151
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
MR GF+ + T SV+S+C + +++H VK L++ V ++L+ +Y++CG
Sbjct: 152 EMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCG 211
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+ D+V+ F + V WSSM+A Y + EEA+ L+ + ++ E N T S++
Sbjct: 212 MIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVIC 271
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
ACS+ +G + ++ K + + VD+ +CG L E+ + + K N
Sbjct: 272 ACSNLAALIEGKQMHAVICKS-GFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEK-NL 329
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLS 282
+W T++S H + E++ G++P + LLS
Sbjct: 330 ELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLS 372
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 94/185 (50%), Gaps = 6/185 (3%)
Query: 78 VISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSD 137
++ C+ + + + H ++++ DV +++ LI+ YS+CG ++ + + F
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 138 VVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFD 197
+V W++MI Y + EA+++F +M + F+ ++ T S+L A CG+ +E
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSA---CGVNCDALECKK 183
Query: 198 LMVKKYRRKPRLEHY--TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK 255
L + L Y T ++DL +CG + +A + +M K+ ++ W ++++ +K
Sbjct: 184 LHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKS-SVTWSSMVAGYVQNK 242
Query: 256 STDMA 260
+ + A
Sbjct: 243 NYEEA 247
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 90/185 (48%), Gaps = 3/185 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF ++ SS MY K GSL E + + +N+ W T+I+G A++ ++V+ +
Sbjct: 293 GFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILF 352
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEV-VKAGASLDVGVISSLISMYSR 119
M+ G P+++TF S++S C + +G++ + G S +V S ++ + R
Sbjct: 353 EKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGR 412
Query: 120 CGCLDDSVKTFLECEYSDVV-LWSSMIAAYGFHGKGEEAINLFEQMEQKEFE-ANDVTFV 177
G L ++ + + +W S++A+ + E A E++ + E E A + +
Sbjct: 413 AGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLL 472
Query: 178 SLLYA 182
S +YA
Sbjct: 473 SNIYA 477
>gi|125601229|gb|EAZ40805.1| hypothetical protein OsJ_25283 [Oryza sativa Japonica Group]
Length = 492
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 170/440 (38%), Positives = 261/440 (59%), Gaps = 14/440 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
DLV+ +++ H Y G + ++ R+ +W ++I+ A++ +++ L+ + M
Sbjct: 53 DLVSWNTMIHGYAMRGEVGLAREIFDGTEDRDAFSWSSMISAYAKSRRSKEALELWREMH 112
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
PD IT VSV+S+CS+L L G ++H V LD+ + ++LI MY++CG ++
Sbjct: 113 AASIIPDCITLVSVVSACSDLGALAVGAEVHRFVESNRIELDLKLGTALIDMYAKCGDIE 172
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ + F DV WSSMI HG G E+++LF +M + + N VTFV +L AC+
Sbjct: 173 SAQRVFDRMPEKDVQTWSSMIIGLANHGLGHESLSLFSKMISEGMKPNGVTFVGVLIACT 232
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL +G ++F M + + +P +EHY C+VDLLGR G+++EA LIR+M + + IIW
Sbjct: 233 HVGLVSEGKKYFRSMNEVHGIEPTVEHYGCMVDLLGRSGHVEEARQLIRSMTFEPDTIIW 292
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
+ LL AC+ HK+ ++A ++ ++P YVLLSNI+A A W+GV+E R+ +R
Sbjct: 293 RALLGACRIHKNVEIAEEAMAKLRVLDPLGDGHYVLLSNIYAQANSWEGVAEMRKTIRRD 352
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
N+++ PG S +E ++H+F GD+ HPRS EI LEE+ +K GY P TG + D+
Sbjct: 353 NIQRIPGRSSIEWDEKIHEFVSGDRLHPRSKEIYRVLEEMMDRLKQAGYKPMTGLVLQDI 412
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHT---RGLIVML-----------PFKYISEIKNREIIV 410
D + KE +L HSEKLAIAFA T R I + K IS + +R++IV
Sbjct: 413 DEQSKERSLAEHSEKLAIAFALLTTPARSTIRITKNLRACEDCHSAMKLISLVYDRKLIV 472
Query: 411 RDASRFHHFRNGKCSCGDYW 430
RD +RFHHF G+CSC DYW
Sbjct: 473 RDRNRFHHFSEGQCSCKDYW 492
>gi|449468588|ref|XP_004152003.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 558
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 167/445 (37%), Positives = 262/445 (58%), Gaps = 15/445 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + D+ ++L +Y GSL KV M R+ ++W T+IA NG A + LD +
Sbjct: 114 GLDSDIFVQNALICVYGYCGSLEMAVKVFDEMSERDSVSWSTVIASFLNNGYASEALDLF 173
Query: 61 NLMRMVG-FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
M++ PD++T +SVIS+ S L L G+ + A + + G + V + ++LI M+SR
Sbjct: 174 EKMQLEDKVVPDEVTMLSVISAISHLGDLELGRWVRAFIGRLGLGVSVALGTALIDMFSR 233
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG +D+S+ F + +V+ W+++I G HG+ EA+ +F M + + + VTF +
Sbjct: 234 CGSIDESIVVFEKMAVRNVLTWTALINGLGVHGRSTEALAMFHSMRKSGVQPDYVTFSGV 293
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L ACSH GL ++G + F+ + K YR P L+HY C+VD+LGR G L+EA + MP+K
Sbjct: 294 LVACSHGGLVKEGWDIFESIRKVYRMDPLLDHYGCMVDILGRAGLLNEAYDFVERMPMKP 353
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
N+IIW+TLL AC H + +A ++ +I ++ VLLSN++ +A RW + R
Sbjct: 354 NSIIWRTLLGACVNHNNLGLAEKVKAKISKISSSQNGDLVLLSNVYGAAGRWVEKASIRS 413
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
MRE+ + KEPG S + + +H+F GD SHP+S +I +L + +++ RGY+ T
Sbjct: 414 KMREKRIGKEPGCSSINVDQTIHEFVSGDNSHPQSEDITKFLSSIIGDLRNRGYMMQTKN 473
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFA----EHTRGLIVMLPF----------KYISEIKN 405
+HD++ EE+E++L +HSEKLA+AFA + R + +M K+IS
Sbjct: 474 VLHDIEEEEREHSLSYHSEKLAVAFAILSMKDKRTIRIMKNLRICYDCHSFMKHISVRFE 533
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
R+II+RD +RFHHF G CSC DYW
Sbjct: 534 RKIIIRDRNRFHHFEKGLCSCHDYW 558
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 124/240 (51%), Gaps = 8/240 (3%)
Query: 21 SLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVIS 80
SL V +P + IA+ T+I ++ + + ++ MR G D TF V+
Sbjct: 37 SLSYARYVFSRIPSPDTIAYNTIIRSHSRFFPSHSLFYFFS-MRSNGIPLDNFTFPFVLK 95
Query: 81 SCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVL 140
+CS L +H+ +VK G D+ V ++LI +Y CG L+ +VK F E D V
Sbjct: 96 ACSRLQI---NLHLHSLIVKYGLDSDIFVQNALICVYGYCGSLEMAVKVFDEMSERDSVS 152
Query: 141 WSSMIAAYGFHGKGEEAINLFEQME-QKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLM 199
WS++IA++ +G EA++LFE+M+ + + ++VT +S++ A SH G E G +
Sbjct: 153 WSTVIASFLNNGYASEALDLFEKMQLEDKVVPDEVTMLSVISAISHLGDLELG-RWVRAF 211
Query: 200 VKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH-KSTD 258
+ + + T ++D+ RCG +DE+ + M V+ N + W L++ H +ST+
Sbjct: 212 IGRLGLGVSVALGTALIDMFSRCGSIDESIVVFEKMAVR-NVLTWTALINGLGVHGRSTE 270
>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
Length = 742
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 171/452 (37%), Positives = 265/452 (58%), Gaps = 23/452 (5%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
E +++ G++L MY K GS E V M R++I+W T+I+ + L + +
Sbjct: 291 LEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQ 350
Query: 62 LMRMV-------GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLI 114
M + +PD + FV+++++C++++ L QG+ + + G S D V ++++
Sbjct: 351 QMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVV 410
Query: 115 SMYSRCGCLDDSVKTF-LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEAND 173
++Y +CG ++++ + F C DV LW++MIA Y G+ EA+ LF +ME + +
Sbjct: 411 NLYGKCGEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDS 470
Query: 174 VTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPR-LEHYTCVVDLLGRCGYLDEAAALI 232
+FVS+L ACSH GL+++G +F M +YR R ++H+ CV DLLGR G L EA +
Sbjct: 471 FSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFL 530
Query: 233 RNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQ 292
+PVK +A+ W +LL+AC+ H+ A +A ++L + P+ A YV LSNI+A ++W
Sbjct: 531 EKLPVKPDAVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWH 590
Query: 293 GVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRG 352
V++ R+ M E+ VKKE GVS +EI +H F GD +HPR+ EI L +L S+MK G
Sbjct: 591 AVAKVRKFMAEQGVKKERGVSTIEIGKYMHDFATGDDAHPRNREIREELAKLHSQMKECG 650
Query: 353 YVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFA----------EHTRGLIVM----LPFK 398
YVPDT +H +D +EKE L HSE+LAIA T+ L V K
Sbjct: 651 YVPDTKMVLHFVDEQEKERLLFSHSERLAIALGLISTPLGTPLRVTKNLRVCSDCHTATK 710
Query: 399 YISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
IS+I R+I+VRD +RFH F++GKCSC DYW
Sbjct: 711 LISKIAGRKIVVRDPTRFHLFKDGKCSCQDYW 742
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 170/328 (51%), Gaps = 32/328 (9%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLM--PIRNVIAWITLIAGKAQNGLAEDVLD 58
GFE +L+ +++ MY + G++ E KV M +R+V++W +++ N +D +
Sbjct: 190 GFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVHNDRGKDAIQ 249
Query: 59 QYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
Y M++ RPDK+T+VS++S+CS +G G+ +H ++V +V V ++L+SMY+
Sbjct: 250 LYQRMQL---RPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYA 306
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM-------EQKEFEA 171
+CG ++ F + E ++ W+++I+AY EA +LF+QM + +
Sbjct: 307 KCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKP 366
Query: 172 NDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEH----YTCVVDLLGRCGYLDE 227
+ + FV++L AC+ E+G MV + L T VV+L G+CG ++E
Sbjct: 367 DALAFVTILNACADVSALEQGK-----MVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEE 421
Query: 228 AAALIRNMPVKANAIIWKTLLSA----CKTHKSTDMAGRIAEEILGVNPQDAAPYV--LL 281
A + + + + +W +++ ++H++ + R+ E+ GV P D+ +V LL
Sbjct: 422 ARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRM--EMEGVRP-DSFSFVSILL 478
Query: 282 SNIHASAKRWQGVSEFREAMRE-RNVKK 308
+ H + QG S F E RNV +
Sbjct: 479 ACSHTGLED-QGKSYFTSMTTEYRNVTR 505
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 133/252 (52%), Gaps = 8/252 (3%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMP-IRNVIAWITLIAGKAQNGLAEDVLDQY 60
E+D ++L +MY K GSL ++V M RNVI+W + A +G + L +
Sbjct: 89 LEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGAHALHGNVWEALRHF 148
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M ++G + K V+++S+CS A + G+ IH+ + +G ++ V +++++MY RC
Sbjct: 149 RFMLLLGIKATKSAMVTILSACSSPALVQDGRMIHSCIALSGFESELLVANAVMTMYGRC 208
Query: 121 GCLDDSVKTF--LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
G ++++ K F ++ DVV W+ M++ Y + +G++AI L+++M + + VT+VS
Sbjct: 209 GAVEEARKVFDAMDEALRDVVSWNIMLSTYVHNDRGKDAIQLYQRM---QLRPDKVTYVS 265
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
LL ACS G +V K + +V + +CG EA A+ M +
Sbjct: 266 LLSACSSAEDVGLGRVLHKQIVNDELEKNVIVG-NALVSMYAKCGSHTEARAVFDKMEQR 324
Query: 239 ANAIIWKTLLSA 250
+ I W T++SA
Sbjct: 325 -SIISWTTIISA 335
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 114/237 (48%), Gaps = 3/237 (1%)
Query: 15 MYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKIT 74
MY S + + + RN+ +W L+A A +G +++ L MR G RPD +T
Sbjct: 1 MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
F++ + SC + +L G +IH VV + +D V ++L++MY +CG L + + F + E
Sbjct: 61 FITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKME 120
Query: 135 YS-DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGM 193
+ +V+ WS M A+ HG EA+ F M +A V++L ACS L + G
Sbjct: 121 RTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDG- 179
Query: 194 EFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII-WKTLLS 249
+ + L V+ + GRCG ++EA + M ++ W +LS
Sbjct: 180 RMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLS 236
>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1212
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 162/441 (36%), Positives = 265/441 (60%), Gaps = 15/441 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D++ +++ ++Y + + V + +++++W ++I NGLA + L+ +N +
Sbjct: 486 DILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLI 545
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
PD IT VSV+ + + L++L +G++IH +++ G L+ + +SL+ MY+RCG ++
Sbjct: 546 ETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTME 605
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
++ F + D++LW+SMI A G HG G++AI+LF +M + + +TF++LLYACS
Sbjct: 606 NARNIFNYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMTDENVLPDHITFLALLYACS 665
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL +G + F++M +Y+ +P EHY C+VDLL R L+EA +RNMP++ +A +W
Sbjct: 666 HSGLVVEGKQHFEIMKNEYKLEPWPEHYACLVDLLARSNSLEEAYHFVRNMPIEPSAEVW 725
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
LL AC+ H + D+ A+++L +N +++ YVL+SN A+ RW V E R M+
Sbjct: 726 CALLGACRIHSNNDLGEVAAKKLLQLNTENSGNYVLVSNTFAADGRWNDVEEVRSIMKGN 785
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLR-GYVPDTGADMHD 363
+KK+PG SW+E++N++H F DKSHP+ I L L + T +K + GY T HD
Sbjct: 786 KLKKKPGCSWIEVENKIHTFMARDKSHPQCNNIYLKLAQFTKLLKEKGGYRAQTKLVFHD 845
Query: 364 MDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVMLP------------FKYISEIKNREII 409
+ EEK L HSE+LA+ + ++G + + FK SEI R ++
Sbjct: 846 VCEEEKTQMLYGHSERLALGYGLLVTSKGTCLRITKNLRICDDCHAFFKIASEISQRTLV 905
Query: 410 VRDASRFHHFRNGKCSCGDYW 430
VRDASRFHHF G CSCGD+W
Sbjct: 906 VRDASRFHHFERGLCSCGDFW 926
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 119/249 (47%), Gaps = 16/249 (6%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+ HMY K GS + KV M R + W +I G + ++ Y MR++G
Sbjct: 86 TKFVHMYGKCGSFYDAVKVFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVS 145
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
D TF V+ +C G +IH VK G V V ++LI+MY++CG L +
Sbjct: 146 LDAFTFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVL 205
Query: 130 FLE--CEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCG 187
F E D V W+S+I+A+ G+ EA++LF +M++ E+N TFVS L AC
Sbjct: 206 FDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPT 265
Query: 188 LKEKGMEFFDLMVKKYRRKPRLEHYT------CVVDLLGRCGYLDEAAALIRNMPVKANA 241
+ G +++K H+T ++ + CG +++A + ++M K +
Sbjct: 266 FIKIGRGIHAVILKS-------NHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFK-DC 317
Query: 242 IIWKTLLSA 250
+ W TLLS
Sbjct: 318 VSWNTLLSG 326
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 133/249 (53%), Gaps = 7/249 (2%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ ++L MY G + + E+V + M ++ ++W TL++G QN + D ++ + M+
Sbjct: 285 DVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQ 344
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G +PD+++ +++I++ A L G ++HA +K G ++ + +SLI MY +C C+
Sbjct: 345 DSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVK 404
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
F D++ W+++IA Y + +A+NL +++ ++ + + + S+L ACS
Sbjct: 405 YMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACS 464
Query: 185 HCGLKEKGM--EFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
GLK + + E ++K +++ +V++ G +D A + ++ K + +
Sbjct: 465 --GLKSEKLIKEIHGYVLKGGLADILIQN--AIVNVYGELALVDYARHVFESINSK-DIV 519
Query: 243 IWKTLLSAC 251
W ++++ C
Sbjct: 520 SWTSMITCC 528
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 149/317 (47%), Gaps = 15/317 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + ++ G+SL MY K + MP +++I+W T+IAG AQN E LD
Sbjct: 382 GIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQN---ECHLDAL 438
Query: 61 NLMRMVGFRP---DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMY 117
NL+R V D + S++ +CS L + ++IH V+K G + D+ + ++++++Y
Sbjct: 439 NLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGLA-DILIQNAIVNVY 497
Query: 118 SRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
+D + F D+V W+SMI +G EA+ LF + + E + +T V
Sbjct: 498 GELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLV 557
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
S+LYA + +KG E +++K L + +VD+ RCG + E A I N
Sbjct: 558 SVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANS-LVDMYARCGTM-ENARNIFNYVK 615
Query: 238 KANAIIWKTLLSACKTH----KSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQG 293
+ + I+W ++++A H + D+ ++ +E V P LL S +G
Sbjct: 616 QRDLILWTSMINANGMHGCGKDAIDLFSKMTDE--NVLPDHITFLALLYACSHSGLVVEG 673
Query: 294 VSEFREAMRERNVKKEP 310
F E ++ P
Sbjct: 674 KQHFEIMKNEYKLEPWP 690
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 121/244 (49%), Gaps = 6/244 (2%)
Query: 10 SSLAHMYMKSGSLVEGEKVI---RLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV 66
++L MY K G L G +V+ LM + ++W ++I+ G + + L + M+ V
Sbjct: 187 NALIAMYAKCGDL-GGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEV 245
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
G + TFVS + +C + G+ IHA ++K+ DV V ++LI+MY+ CG ++D+
Sbjct: 246 GVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDA 305
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHC 186
+ F + D V W+++++ + +AIN F+ M+ + + V+ ++++ A
Sbjct: 306 ERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRS 365
Query: 187 GLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKT 246
GME + K+ + ++D+ G+C + + MP K + I W T
Sbjct: 366 ANLLAGMEVHAYAI-KHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEK-DLISWTT 423
Query: 247 LLSA 250
+++
Sbjct: 424 IIAG 427
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 85/185 (45%), Gaps = 7/185 (3%)
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLD-VGVISSLISMYSRCGCLDDSVK 128
P + + + C+ L QGQQ+HA +K LD V + + + MY +CG D+VK
Sbjct: 44 PLQQAYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVK 103
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F + + W++MI A G+ EAI L+++M + TF +L AC
Sbjct: 104 VFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKE 163
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTC--VVDLLGRCGYLDEAAALIRN-MPVKANAIIWK 245
+ G E + VK + C ++ + +CG L A L + + K + + W
Sbjct: 164 RRLGCEIHGVAVKCGYGGFV---FVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWN 220
Query: 246 TLLSA 250
+++SA
Sbjct: 221 SIISA 225
>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
Length = 1217
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 162/413 (39%), Positives = 249/413 (60%), Gaps = 17/413 (4%)
Query: 32 MPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQG 91
M +++++W +I +N + + ++ Y+ M GF PD ++ SV+ +C + + L G
Sbjct: 270 MGKKSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLG 329
Query: 92 QQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFH 151
++IH + + ++ + ++LI MY++CGCLD + F + DVV W++MI+AYGF
Sbjct: 330 KKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFS 389
Query: 152 GKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEH 211
G+G +A+ LF +M+ + + FV+ L ACSH GL E+G F LM Y+ PRLEH
Sbjct: 390 GRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEH 449
Query: 212 YTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVN 271
C+VDLLGR G + EA I+ MP++ N +W LL AC+ H +TD+ A+++ +
Sbjct: 450 LACMVDLLGRAGKVKEAYKFIQEMPMEPNERVWGALLGACRVHSNTDIGLLAADKLFQLA 509
Query: 272 PQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSH 331
P+ + YVLLSNI+A A RW+ V+ R M+ + +KK PG S +E+ +H F +GD+SH
Sbjct: 510 PEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSH 569
Query: 332 PRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFA------ 385
P+S EI L+ L +MK GYVPD+ + +HD++ E+KE +L HSEKLAI FA
Sbjct: 570 PQSAEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTEE 629
Query: 386 EHTRGLIVM-----------LPFKYISEIKNREIIVRDASRFHHFRNGKCSCG 427
E + I + + K IS+I +REII+RD +RFH FR G CSC
Sbjct: 630 EDSNNAIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCA 682
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 133/313 (42%), Gaps = 18/313 (5%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G L Y + KV +P RNVI +I NG + + + M
Sbjct: 78 GVKLMRAYASLKDVATARKVFDEIPERNVIIINVMIRSYVNNGFYREGIQVFGTMCSCHV 137
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
+PD TF V+ +CS + G++IH K G S + V + L+SMY +CG L ++
Sbjct: 138 KPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARL 197
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
E DVV W+S++A Y + + ++A+ + +ME + + T SLL A S+
Sbjct: 198 VLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT-T 256
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV---KANAIIWK 245
E M D+ K ++ L + ++ + + EA L M + +A+
Sbjct: 257 TENVMYVKDMFFKMGKKS--LVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSIT 314
Query: 246 TLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSN----IHASAKRWQGVSEFREAM 301
++L AC + + +I I + P +LL N ++A + E M
Sbjct: 315 SVLPACGDTSALSLGKKIHGYI---ERKKLIPNLLLENALIDMYAKCGCLDRARDVFENM 371
Query: 302 RERNVKKEPGVSW 314
+ R+V VSW
Sbjct: 372 KSRDV-----VSW 379
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 103/250 (41%), Gaps = 35/250 (14%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G L G+ L MY K G L E V+ M R+V++W +L+AG AQN +D L+
Sbjct: 171 GLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVC 230
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M V D T S++ + S T E V MY +
Sbjct: 231 REMESVKISHDAGTMASLLPAVSNTTT---------ENV----------------MYVK- 264
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
F + +V W+ MI Y + EA+ L+ ME FE + V+ S+L
Sbjct: 265 -------DMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVL 317
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC G + + +K + P L ++D+ +CG LD A + NM + +
Sbjct: 318 PACGDTSALSLGKKIHGYIERK-KLIPNLLLENALIDMYAKCGCLDRARDVFENMKSR-D 375
Query: 241 AIIWKTLLSA 250
+ W ++SA
Sbjct: 376 VVSWTAMISA 385
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 46/88 (52%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
+L+ ++L MY K G L V M R+V++W +I+ +G D + ++ M+
Sbjct: 344 NLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKMQ 403
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQ 92
G PD I FV+ +++CS L +G+
Sbjct: 404 DSGLVPDSIAFVTTLAACSHAGLLEEGR 431
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 90/214 (42%), Gaps = 10/214 (4%)
Query: 57 LDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISM 116
LDQ N + F V+ + +L TL + +H+ ++ + + L+
Sbjct: 33 LDQKNSPKETAF-----MLGQVLDTYPDLKTL---RTVHSRIISEDLRYNSSLGVKLMRA 84
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
Y+ + + K F E +V++ + MI +Y +G E I +F M + + TF
Sbjct: 85 YASLKDVATARKVFDEIPERNVIIINVMIRSYVNNGFYREGIQVFGTMCSCHVKPDHYTF 144
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
+L ACS G G + K L +V + G+CG+L EA ++ M
Sbjct: 145 PCVLKACSCSGNIVIGKKIHG-SATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMS 203
Query: 237 VKANAIIWKTLLSACKTHKSTDMAGRIAEEILGV 270
+ + + W +L++ ++ D A + E+ V
Sbjct: 204 -RRDVVSWNSLVAGYAQNQRFDDALEVCREMESV 236
>gi|356518836|ref|XP_003528083.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 568
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 174/446 (39%), Positives = 253/446 (56%), Gaps = 16/446 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF ++ ++L + Y SGSL K+ MP R++I+W +LI+ A+ GL ++ L +
Sbjct: 123 GFHSNIYVQNALINSYGTSGSLHASLKLFDEMPRRDLISWSSLISCFAKRGLPDEALTLF 182
Query: 61 NLMRM--VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
M++ PD + +SVIS+ S L L G +HA + + G +L V + S+LI MYS
Sbjct: 183 QQMQLKESDILPDGVVMLSVISAVSSLGALELGIWVHAFISRIGVNLTVSLGSALIDMYS 242
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
RCG +D SVK F E + +VV W+++I HG+G EA+ F M + + + + F+
Sbjct: 243 RCGDIDRSVKVFDEMPHRNVVTWTALINGLAVHGRGREALEAFYDMVESGLKPDRIAFMG 302
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+L ACSH GL E+G F M +Y +P LEHY C+VDLLGR G + EA + M V+
Sbjct: 303 VLVACSHGGLVEEGRRVFSSMWSEYGIEPALEHYGCMVDLLGRAGMVLEAFDFVEGMRVR 362
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
N++IW+TLL AC H +A + E I ++P YVLLSN + W R
Sbjct: 363 PNSVIWRTLLGACVNHNLLVLAEKAKERIKELDPHHDGDYVLLSNAYGGVGNWVKKEGVR 422
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
+MRE + KEPG+S + I H+F GD SHP+ EI +L + +KL GY P T
Sbjct: 423 NSMRESKIVKEPGLSLVHIDQVAHEFVSGDNSHPQWEEITRFLGSVIDTVKLGGYTPSTK 482
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAFA---EHTRGLIVMLP-----------FKYISEIK 404
+HD+ EEKE++L +HSEKLA+AF R I ++ K++S
Sbjct: 483 NVLHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKTIRVIKNLRICYDCHSFMKHVSGFF 542
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
+R+I++RD SRFHHFR G CSC D+W
Sbjct: 543 DRDIVIRDRSRFHHFRKGSCSCRDFW 568
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 84/163 (51%), Gaps = 4/163 (2%)
Query: 94 IHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGK 153
IH V+K G ++ V ++LI+ Y G L S+K F E D++ WSS+I+ + G
Sbjct: 115 IHTLVLKLGFHSNIYVQNALINSYGTSGSLHASLKLFDEMPRRDLISWSSLISCFAKRGL 174
Query: 154 GEEAINLFEQMEQKEFE--ANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEH 211
+EA+ LF+QM+ KE + + V +S++ A S G E G+ + + + +
Sbjct: 175 PDEALTLFQQMQLKESDILPDGVVMLSVISAVSSLGALELGI-WVHAFISRIGVNLTVSL 233
Query: 212 YTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
+ ++D+ RCG +D + + MP + N + W L++ H
Sbjct: 234 GSALIDMYSRCGDIDRSVKVFDEMPHR-NVVTWTALINGLAVH 275
>gi|147854977|emb|CAN80267.1| hypothetical protein VITISV_027683 [Vitis vinifera]
Length = 539
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 175/449 (38%), Positives = 265/449 (59%), Gaps = 29/449 (6%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
DL + + + Y+ SG + +++ M R+V++W T+IAG Q G ++ LD ++ M
Sbjct: 97 DLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEML 156
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G P++ T S +++C+ L L QG+ IH + K+ ++ +++SL+ MY++CG +D
Sbjct: 157 QTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEID 216
Query: 125 DSVKTFLECEYS---DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+ K F + EY V W++MI Y HGK +EAI+LFEQM+ ++ N VTFV+LL
Sbjct: 217 FAAKVFHD-EYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLN 275
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
ACSH L E+G +F M Y +P +EHY C+VDLLGR G L EA + NMP+ +A
Sbjct: 276 ACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPDA 335
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
IW LL AC+ HK + RI + I ++ +VLL+N+++++ +W R+ +
Sbjct: 336 TIWGALLGACRIHKDIERGQRIGKIIKELDSDHIGCHVLLANLYSASGQWDEAKAVRQKI 395
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
KK PG S +E+ HQF +GD+SHP++ ++ L+L+E+T+++K GYVP+ G +
Sbjct: 396 EVSGRKKTPGCSSIELNGVFHQFLVGDRSHPQTKQLYLFLDEMTTKLKNAGYVPEFGEVL 455
Query: 362 HDMDSEE-KEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
D+D EE KE L HSEKLAIAF GLI P K+IS
Sbjct: 456 LDIDDEEDKETALSKHSEKLAIAF-----GLINTPPGTAIRIVKNLRVCADCHEATKFIS 510
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
++ REIIVRD R+HHF++G CSC DYW
Sbjct: 511 KVYKREIIVRDRIRYHHFKDGFCSCKDYW 539
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 112/256 (43%), Gaps = 35/256 (13%)
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+++R+ GF P++ TFV V +C + +G+QI +K G ++ V +++I MY+
Sbjct: 21 SMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQIRVHAIKIGLESNLFVTNAMIRMYANW 80
Query: 121 GCLDDSVKT-------------------------------FLECEYSDVVLWSSMIAAYG 149
G +D++ + F E DVV W+++IA Y
Sbjct: 81 GLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYV 140
Query: 150 FHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRL 209
G +EA++LF +M Q N+ T S L AC++ ++G + + + K K
Sbjct: 141 QVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQG-RWIHVYIDKSEIKMNE 199
Query: 210 EHYTCVVDLLGRCGYLDEAAALIRN-MPVKANAIIWKTLLSACKTHKSTDMAGRIAEE-- 266
++D+ +CG +D AA + + +K W ++ H + A + E+
Sbjct: 200 RLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQMK 259
Query: 267 ILGVNPQDAAPYVLLS 282
+ V+P LL+
Sbjct: 260 VEKVSPNKVTFVALLN 275
>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 722
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 167/446 (37%), Positives = 264/446 (59%), Gaps = 20/446 (4%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
+L +++ Y K G L + + + ++++ W T+I+ ++ ++ L + M
Sbjct: 277 NLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMC 336
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G +PD ++ SVIS+C+ L L + + +H+ + G ++ + ++LI+MY++CG LD
Sbjct: 337 CSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLD 396
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ F + +VV WSSMI A HG+ +A++LF +M+Q+ E N+VTFV +LY CS
Sbjct: 397 ATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCS 456
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL E+G + F M +Y P+LEHY C+VDL GR L EA +I +MPV +N +IW
Sbjct: 457 HSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIW 516
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
+L+SAC+ H ++ A+ IL + P VL+SNI+A +RW+ V R M E+
Sbjct: 517 GSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEK 576
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
NV KE G+S ++ + H+F +GDK H +S EI L+E+ S++KL GYVPD G+ + D+
Sbjct: 577 NVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDV 636
Query: 365 DSEEKEYNLKHHSEKLAIAFA---------EHTRGLIVM-----------LPFKYISEIK 404
+ EEK+ + HSEKLA+ F + + G+I + L FK +S++
Sbjct: 637 EEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVY 696
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
REIIVRD +RFH ++NG CSC DYW
Sbjct: 697 EREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 124/281 (44%), Gaps = 33/281 (11%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D + MY G + V M R+V+ W T+I + GL ++ + M+
Sbjct: 145 DPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMK 204
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC-- 122
PD++ +++S+C + + I+ +++ +D ++++L++MY+ GC
Sbjct: 205 DSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMD 264
Query: 123 -----------------------------LDDSVKTFLECEYSDVVLWSSMIAAYGFHGK 153
LDD+ F + E D+V W++MI+AY
Sbjct: 265 MAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDY 324
Query: 154 GEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYT 213
+EA+ +FE+M + + V+ S++ AC++ G+ +K ++ + + L
Sbjct: 325 PQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKA-KWVHSCIHVNGLESELSINN 383
Query: 214 CVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
++++ +CG LD + MP + N + W ++++A H
Sbjct: 384 ALINMYAKCGGLDATRDVFEKMP-RRNVVSWSSMINALSMH 423
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 114/255 (44%), Gaps = 33/255 (12%)
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
Y +R VG R D+ +F+ ++ + S+++ L +G ++H K D V + + MY+
Sbjct: 99 YQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYAS 158
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG ++ + F E + DVV W++MI Y G +EA LFE+M+ +++ ++
Sbjct: 159 CGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNI 218
Query: 180 LYACSHCGLKEKGMEFFDL---------------------------MVKKYRRKPRLEHY 212
+ AC G ++ M +++ RK + +
Sbjct: 219 VSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNL 278
Query: 213 ---TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL- 268
T +V +CG LD+ A +I + K + + W T++SA A R+ EE+
Sbjct: 279 FVSTAMVSGYSKCGRLDD-AQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCC 337
Query: 269 -GVNPQDAAPYVLLS 282
G+ P + + ++S
Sbjct: 338 SGIKPDVVSMFSVIS 352
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 81/157 (51%), Gaps = 2/157 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E +L ++L +MY K G L V MP RNV++W ++I + +G A D L +
Sbjct: 374 GLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLF 433
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVV-KAGASLDVGVISSLISMYSR 119
M+ P+++TFV V+ CS + +G++I A + + + + ++ ++ R
Sbjct: 434 ARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGR 493
Query: 120 CGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGE 155
L ++++ S+VV+W S+++A HG+ E
Sbjct: 494 ANLLREALEVIESMPVASNVVIWGSLMSACRIHGELE 530
>gi|449469094|ref|XP_004152256.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Cucumis sativus]
Length = 611
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 170/440 (38%), Positives = 253/440 (57%), Gaps = 16/440 (3%)
Query: 7 VAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV 66
V+ +S+ Y +SG E + P+RN+ +W LI+G Q+G +N MR
Sbjct: 172 VSWTSMISGYARSGRKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRRE 231
Query: 67 GFR-PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD 125
G D + SV+ C+ LA L G+QIH V+ G + + ++L+ MY++C +
Sbjct: 232 GIDIVDPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILA 291
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
+ F DV+ W+S+I HGK EEA+ L+++M + N+VTFV LLYACSH
Sbjct: 292 AKDIFYRMPRKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSH 351
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
GL +G E F M Y P L+HYTC++DLL R G+LDEA L+ +P K + W
Sbjct: 352 AGLVSRGRELFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWA 411
Query: 246 TLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERN 305
+LLSAC H + +M RIA+ +L + P+D + Y+LLSN++A A+ W VS+ R+ M
Sbjct: 412 SLLSACMRHNNLEMGVRIADRVLDLKPEDPSTYILLSNVYAGAEMWGSVSKVRKLMSSME 471
Query: 306 VKKEPGVSWLEIKNQVHQFTMGDK-SHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
V+KEPG S ++ F G+ HP EI L++L +EM+ RGYVP+T ++D+
Sbjct: 472 VRKEPGYSSIDFGKDSQVFHAGESCDHPMKNEICNLLKDLDAEMRKRGYVPNTSFVLYDI 531
Query: 365 DSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNREIIV 410
+ +EKE L HSE+LA+A+ + G I+ + K+IS+I REI+V
Sbjct: 532 EQQEKEKQLFWHSERLAVAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFISDIVKREIMV 591
Query: 411 RDASRFHHFRNGKCSCGDYW 430
RDA+R+HHF+ GKCSC D+W
Sbjct: 592 RDATRYHHFKEGKCSCNDFW 611
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 131/307 (42%), Gaps = 47/307 (15%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ + ++L +Y K G + + ++ MP R+ ++W +++ + + L
Sbjct: 33 GFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSWASILTAHNKALIPRRTLSML 92
Query: 61 NLM-RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
N M G +PD F ++ +CS L L G+Q+HA + + D V SSLI MY++
Sbjct: 93 NTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSFFCDDEVVKSSLIDMYTK 152
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEF---------- 169
CG DD+ F + + V W+SMI+ Y G+ EA++LF Q +
Sbjct: 153 CGQPDDARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRNLFSWTALISGL 212
Query: 170 ------------------EANDV----TFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKP 207
E D+ S++ C++ L E G + L++
Sbjct: 213 IQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIHGLVIA------ 266
Query: 208 RLEHYTC------VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAG 261
L +C +VD+ +C + A + MP K + I W +++ H + A
Sbjct: 267 -LGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRK-DVISWTSIIVGTAQHGKAEEAL 324
Query: 262 RIAEEIL 268
+ +E++
Sbjct: 325 TLYDEMV 331
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 97/185 (52%), Gaps = 3/185 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE L ++L MY K ++ + + MP ++VI+W ++I G AQ+G AE+ L Y
Sbjct: 268 GFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKAEEALTLY 327
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQI-HAEVVKAGASLDVGVISSLISMYSR 119
+ M + +P+++TFV ++ +CS + +G+++ + + + + L+ + SR
Sbjct: 328 DEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCLLDLLSR 387
Query: 120 CGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQ-MEQKEFEANDVTFV 177
G LD++ + + D W+S+++A H E + + ++ ++ K + + +
Sbjct: 388 SGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRIADRVLDLKPEDPSTYILL 447
Query: 178 SLLYA 182
S +YA
Sbjct: 448 SNVYA 452
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 87/187 (46%), Gaps = 23/187 (12%)
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
F+ + C+ + ++H++++KAG + ++L+ +Y +CG + +++ F E
Sbjct: 6 FLHQLQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMP 65
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE-FEANDVTFVSLLYACSHCGLKEKG- 192
D V W+S++ A+ +++ M + + + F ++ ACS G G
Sbjct: 66 NRDHVSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGK 125
Query: 193 -------MEFF--DLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
+ FF D +VK + ++D+ +CG D+A A+ ++ K N++
Sbjct: 126 QVHARFMLSFFCDDEVVK-----------SSLIDMYTKCGQPDDARAVFDSILFK-NSVS 173
Query: 244 WKTLLSA 250
W +++S
Sbjct: 174 WTSMISG 180
>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 163/419 (38%), Positives = 254/419 (60%), Gaps = 17/419 (4%)
Query: 28 VIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELAT 87
V M RN I+W ++++G QNG D L +N M+ P+ +T + ++S+CS L +
Sbjct: 259 VFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGS 318
Query: 88 LGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYS--DVVLWSSMI 145
G+++H V+ + +D + ++++ MY +CG LD +V+ F CE DV W+ +I
Sbjct: 319 KHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLI 378
Query: 146 AAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRR 205
+ YG HG G+EA+ LF +M+ + E ND+TF S+L ACSH GL ++G + F M K R
Sbjct: 379 SGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTKLSVR 438
Query: 206 KPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAE 265
P ++HY C+VD+LGR G+L+EA LI+ +P + + +W LL AC+ H +T++ A
Sbjct: 439 -PEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAAN 497
Query: 266 EILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFT 325
+ + P+ YVL+SNI+A++ +W+ V R+ M+ R +KK S +E +VH F
Sbjct: 498 NLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIEFGTEVHGFH 557
Query: 326 MGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFA 385
D+S P E+ +E L EMK+ GYVPD +HD++ E+KE+ L +HSEKLA+AF
Sbjct: 558 TADQSSPYYREVYRKVESLAIEMKMVGYVPDLSCVLHDVEPEDKEHLLNYHSEKLAVAFG 617
Query: 386 --EHTRGLIVML------------PFKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+ +G+ + + FK+IS I R+IIVRD +RFHHF+ G+CSCGDYW
Sbjct: 618 IMKMDQGMPIQVTKNLRVCSDCHWAFKFISSIYGRKIIVRDGNRFHHFQGGRCSCGDYW 676
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 125/287 (43%), Gaps = 39/287 (13%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF DL ++L MY K G + + +V M IR+V+ W +I Q L +
Sbjct: 162 GFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLF 221
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ GF D+IT +SV S+ + LG G+ IS ++ R
Sbjct: 222 RKMQEEGFLGDEITAISVASAVGQ---LGDGRM---------------AISRARLVFDR- 262
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
E + + W+SM++ Y +G+ +A++LF QM+ E + N VT + ++
Sbjct: 263 ------------MEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMV 310
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACS+ G K G + + ++ + ++D+ +CG LD A + N +
Sbjct: 311 SACSYLGSKHLGRKLHNFVISS-KMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGER 369
Query: 241 AI-IWKTLLSACKTH----KSTDMAGRIAEEILGVNPQDAAPYVLLS 282
+ W L+S H ++ ++ R+ E GV P D +LS
Sbjct: 370 DVSSWNVLISGYGVHGHGKEALELFSRMQVE--GVEPNDITFTSILS 414
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 81/147 (55%), Gaps = 2/147 (1%)
Query: 42 TLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSC-SELATLGQGQQIHAEVVK 100
T++ A G + + +D Y M+ +G + T+ V+ C SEL + G+ +H +VV+
Sbjct: 102 TMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAV-FGEVVHGQVVR 160
Query: 101 AGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINL 160
G D+ V ++L+ MY++CG + D+ + F DVV W++MI Y + +A+ L
Sbjct: 161 TGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALML 220
Query: 161 FEQMEQKEFEANDVTFVSLLYACSHCG 187
F +M+++ F +++T +S+ A G
Sbjct: 221 FRKMQEEGFLGDEITAISVASAVGQLG 247
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 83/184 (45%), Gaps = 20/184 (10%)
Query: 78 VISSCSELATLGQGQQIHAEVVKAGASLDVG-VISSLISMYSRCGCLDDSVKTF------ 130
++ C+ L TL + IH+ + G L ++ LI +YS+ G L + F
Sbjct: 31 LLQCCTSLTTL---KLIHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSARTLFDHRHHH 87
Query: 131 --LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
+ + L ++M+ AY G+ EAI+L+ M++ N+ T+ +L C+
Sbjct: 88 HHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCA---- 143
Query: 189 KEKGMEFFDLMVKKYRRK---PRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
E G F +++ + R L +VD+ +CG + +A + M ++ + + W
Sbjct: 144 SELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIR-DVVCWT 202
Query: 246 TLLS 249
+++
Sbjct: 203 AMIT 206
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 165/444 (37%), Positives = 255/444 (57%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D + L Y K L + +V ++IA ++I +Q E + +
Sbjct: 341 GFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLF 400
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G PD S++++C+ L+ QG+Q+HA ++K D ++L+ Y++C
Sbjct: 401 MEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKC 460
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++D+ F VV WS+MI HG G+ A+ LF +M + N +T S+L
Sbjct: 461 GSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVL 520
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+H GL ++ +F+ M + + EHY+C++DLLGR G LD+A L+ +MP +AN
Sbjct: 521 CACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQAN 580
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A +W LL A + HK ++ AE++ + P+ + +VLL+N +AS+ W V++ R+
Sbjct: 581 ASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKL 640
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M++ N+KKEP +SW+E+K++VH F +GDKSHP + EI L+EL M GY+P+ D
Sbjct: 641 MKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDLMSKAGYIPNVDVD 700
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA----------EHTRGLIVM----LPFKYISEIKNR 406
+HD+D EKE L HHSE+LA+AFA + L + + FK+IS I +R
Sbjct: 701 LHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHMAFKFISNIVSR 760
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EII+RD +RFHHFR+G CSCGDYW
Sbjct: 761 EIIIRDINRFHHFRDGTCSCGDYW 784
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 127/269 (47%), Gaps = 8/269 (2%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G L MY K+ L + KV M R++I W LI+G + G ++ + +R G
Sbjct: 248 GVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGL 307
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
++ T +V+ S + L +Q+HA K G D V++ LI Y +C CL D+++
Sbjct: 308 GVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIR 367
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F EC D++ +SMI A GE AI LF +M +K E + SLL AC+
Sbjct: 368 VFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSA 427
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
E+G + ++K+ +V +CG +++A ++P + + W ++
Sbjct: 428 YEQGKQVHAHLIKRQFMSDAFAG-NALVYTYAKCGSIEDAELAFSSLPERG-VVSWSAMI 485
Query: 249 SACKTH----KSTDMAGRIAEEILGVNPQ 273
H ++ ++ GR+ +E G+NP
Sbjct: 486 GGLAQHGHGKRALELFGRMVDE--GINPN 512
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 129/278 (46%), Gaps = 11/278 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVI-RLMPIRNVIAWITLIAGKAQNGLAEDVLDQ 59
GF D+ ++L MY G + + +V RN ++W L++ +N D +
Sbjct: 37 GFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQV 96
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ M G +P + F V+++C+ + G+Q+HA VV+ G DV ++L+ MY +
Sbjct: 97 FGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVK 156
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G +D + F + SDVV W+++I+ +G AI L QM+ N S+
Sbjct: 157 MGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSI 216
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV--VDLLGRCGYLDEAAALIRNMPV 237
L AC+ G + G + M+K + Y V VD+ + +LD+A + M
Sbjct: 217 LKACAGAGAFDLGRQIHGFMIKA---NADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSH 273
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRI----AEEILGVN 271
+ + I+W L+S C D A I +E LGVN
Sbjct: 274 R-DLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVN 310
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 93/180 (51%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+E D+ ++L MY+K G + + MP +V++W LI+G NG ++
Sbjct: 139 GYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELL 198
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G P+ S++ +C+ G+QIH ++KA A D + L+ MY++
Sbjct: 199 LQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKN 258
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
LDD++K F + D++LW+++I+ G+ +EA ++F + ++ N T ++L
Sbjct: 259 HFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVL 318
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 86/177 (48%), Gaps = 5/177 (2%)
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLEC-E 134
+ V+ C A LG Q+HA + G DV V ++L++MY G +DD+ + F E
Sbjct: 13 LPVVLKCVPDAQLGA--QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGS 70
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGME 194
+ V W+ +++AY + + +AI +F +M + + F ++ AC+ + G +
Sbjct: 71 ERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQ 130
Query: 195 FFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSAC 251
++V+ K +VD+ + G +D A+ + MP ++ + W L+S C
Sbjct: 131 VHAMVVRMGYEKDVFT-ANALVDMYVKMGRVDIASVIFEKMP-DSDVVSWNALISGC 185
>gi|449484291|ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14050, mitochondrial-like [Cucumis sativus]
Length = 611
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 170/440 (38%), Positives = 253/440 (57%), Gaps = 16/440 (3%)
Query: 7 VAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV 66
V+ +S+ Y +SG E + P+RN+ +W LI+G Q+G +N MR
Sbjct: 172 VSWTSMISGYARSGRKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRRE 231
Query: 67 GFR-PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD 125
G D + SV+ C+ LA L G+QIH V+ G + + ++L+ MY++C +
Sbjct: 232 GIDIVDPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILA 291
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
+ F DV+ W+S+I HGK EEA+ L+++M + N+VTFV LLYACSH
Sbjct: 292 AKDIFYRMPRKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSH 351
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
GL +G E F M Y P L+HYTC++DLL R G+LDEA L+ +P K + W
Sbjct: 352 AGLVSRGRELFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWA 411
Query: 246 TLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERN 305
+LLSAC H + +M RIA+ +L + P+D + Y+LLSN++A A+ W VS+ R+ M
Sbjct: 412 SLLSACMRHNNLEMGVRIADRVLDLKPEDPSTYILLSNVYAGAEMWGSVSKVRKLMSSME 471
Query: 306 VKKEPGVSWLEIKNQVHQFTMGDK-SHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
V+KEPG S ++ F G+ HP EI L++L +EM+ RGYVP+T ++D+
Sbjct: 472 VRKEPGYSSIDFGKDSQVFHAGESCDHPMKNEICNLLKDLDAEMRKRGYVPNTSFVLYDI 531
Query: 365 DSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNREIIV 410
+ +EKE L HSE+LA+A+ + G I+ + K+IS+I REI+V
Sbjct: 532 EQQEKEKQLFWHSERLAVAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFISDIVKREIMV 591
Query: 411 RDASRFHHFRNGKCSCGDYW 430
RDA+R+HHF+ GKCSC D+W
Sbjct: 592 RDATRYHHFKEGKCSCNDFW 611
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 131/307 (42%), Gaps = 47/307 (15%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ + ++L +Y K G + + ++ MP R+ ++W +++ + + L
Sbjct: 33 GFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSWASILTAHNKALIPRRTLSML 92
Query: 61 NLM-RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
N M G +PD F ++ +CS L L G+Q+HA + + D V SSLI MY++
Sbjct: 93 NTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSXFCDDEVVKSSLIDMYTK 152
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEF---------- 169
CG D++ F + + V W+SMI+ Y G+ EA++LF Q +
Sbjct: 153 CGQPDEARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRNLFSWTALISGL 212
Query: 170 ------------------EANDV----TFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKP 207
E D+ S++ C++ L E G + L++
Sbjct: 213 IQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIHGLVIA------ 266
Query: 208 RLEHYTC------VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAG 261
L +C +VD+ +C + A + MP K + I W +++ H + A
Sbjct: 267 -LGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRK-DVISWTSIIVGTAQHGKAEEAL 324
Query: 262 RIAEEIL 268
+ +E++
Sbjct: 325 TLYDEMV 331
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 97/185 (52%), Gaps = 3/185 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE L ++L MY K ++ + + MP ++VI+W ++I G AQ+G AE+ L Y
Sbjct: 268 GFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKAEEALTLY 327
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQI-HAEVVKAGASLDVGVISSLISMYSR 119
+ M + +P+++TFV ++ +CS + +G+++ + + + + L+ + SR
Sbjct: 328 DEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCLLDLLSR 387
Query: 120 CGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQ-MEQKEFEANDVTFV 177
G LD++ + + D W+S+++A H E + + ++ ++ K + + +
Sbjct: 388 SGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRIADRVLDLKPEDPSTYILL 447
Query: 178 SLLYA 182
S +YA
Sbjct: 448 SNVYA 452
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 86/178 (48%), Gaps = 5/178 (2%)
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
F+ + C+ + ++H++++KAG + ++L+ +Y +CG + +++ F E
Sbjct: 6 FLHQLQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMP 65
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE-FEANDVTFVSLLYACSHCGLKEKGM 193
D V W+S++ A+ +++ M + + + F ++ ACS G G
Sbjct: 66 NRDHVSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGK 125
Query: 194 EFF-DLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+ M+ + ++ + ++D+ +CG DEA A+ ++ K N++ W +++S
Sbjct: 126 QVHARFMLSXFCDDEVVK--SSLIDMYTKCGQPDEARAVFDSILFK-NSVSWTSMISG 180
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 165/444 (37%), Positives = 255/444 (57%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D + L Y K L + +V ++IA ++I +Q E + +
Sbjct: 434 GFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLF 493
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G PD S++++C+ L+ QG+Q+HA ++K D ++L+ Y++C
Sbjct: 494 MEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKC 553
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++D+ F VV WS+MI HG G+ A+ LF +M + N +T S+L
Sbjct: 554 GSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVL 613
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+H GL ++ +F+ M + + EHY+C++DLLGR G LD+A L+ +MP +AN
Sbjct: 614 CACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQAN 673
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A +W LL A + HK ++ AE++ + P+ + +VLL+N +AS+ W V++ R+
Sbjct: 674 ASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKL 733
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M++ N+KKEP +SW+E+K++VH F +GDKSHP + EI L+EL M GY+P+ D
Sbjct: 734 MKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDLMSKAGYIPNVDVD 793
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA----------EHTRGLIVM----LPFKYISEIKNR 406
+HD+D EKE L HHSE+LA+AFA + L + + FK+IS I +R
Sbjct: 794 LHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHMAFKFISNIVSR 853
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EII+RD +RFHHFR+G CSCGDYW
Sbjct: 854 EIIIRDINRFHHFRDGTCSCGDYW 877
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 127/269 (47%), Gaps = 8/269 (2%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G L MY K+ L + KV M R++I W LI+G + G ++ + +R G
Sbjct: 341 GVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGL 400
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
++ T +V+ S + L +Q+HA K G D V++ LI Y +C CL D+++
Sbjct: 401 GVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIR 460
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F EC D++ +SMI A GE AI LF +M +K E + SLL AC+
Sbjct: 461 VFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSA 520
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
E+G + ++K+ +V +CG +++A ++P + + W ++
Sbjct: 521 YEQGKQVHAHLIKRQFMSDAFAG-NALVYTYAKCGSIEDAELAFSSLPERG-VVSWSAMI 578
Query: 249 SACKTH----KSTDMAGRIAEEILGVNPQ 273
H ++ ++ GR+ +E G+NP
Sbjct: 579 GGLAQHGHGKRALELFGRMVDE--GINPN 605
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 129/278 (46%), Gaps = 11/278 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVI-RLMPIRNVIAWITLIAGKAQNGLAEDVLDQ 59
GF D+ ++L MY G + + +V RN ++W L++ +N D +
Sbjct: 130 GFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQV 189
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ M G +P + F V+++C+ + G+Q+HA VV+ G DV ++L+ MY +
Sbjct: 190 FGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVK 249
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G +D + F + SDVV W+++I+ +G AI L QM+ N S+
Sbjct: 250 MGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSI 309
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV--VDLLGRCGYLDEAAALIRNMPV 237
L AC+ G + G + M+K + Y V VD+ + +LD+A + M
Sbjct: 310 LKACAGAGAFDLGRQIHGFMIKA---NADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSH 366
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRI----AEEILGVN 271
+ + I+W L+S C D A I +E LGVN
Sbjct: 367 R-DLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVN 403
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 93/180 (51%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+E D+ ++L MY+K G + + MP +V++W LI+G NG ++
Sbjct: 232 GYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELL 291
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G P+ S++ +C+ G+QIH ++KA A D + L+ MY++
Sbjct: 292 LQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKN 351
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
LDD++K F + D++LW+++I+ G+ +EA ++F + ++ N T ++L
Sbjct: 352 HFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVL 411
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 111/241 (46%), Gaps = 6/241 (2%)
Query: 12 LAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPD 71
L Y K +V +P ++W +L+ + NGL + ++ MR G +
Sbjct: 43 LISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCN 102
Query: 72 KITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFL 131
+ + V+ C A LG Q+HA + G DV V ++L++MY G +DD+ + F
Sbjct: 103 EFA-LPVVLKCVPDAQLGA--QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFD 159
Query: 132 EC-EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKE 190
E + V W+ +++AY + + +AI +F +M + + F ++ AC+ +
Sbjct: 160 EAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNID 219
Query: 191 KGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
G + ++V+ K +VD+ + G +D A+ + MP ++ + W L+S
Sbjct: 220 AGRQVHAMVVRMGYEKDVFT-ANALVDMYVKMGRVDIASVIFEKMP-DSDVVSWNALISG 277
Query: 251 C 251
C
Sbjct: 278 C 278
>gi|297848224|ref|XP_002891993.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
gi|297337835|gb|EFH68252.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
Length = 950
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 165/425 (38%), Positives = 253/425 (59%), Gaps = 15/425 (3%)
Query: 20 GSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVI 79
G +V+ +V M R+ W +I + G + L+ + M+ G RP + +S++
Sbjct: 279 GEIVKARRVFDQMEDRDNATWRGMIKAYERKGFELEALELFAQMQRQGVRPSFPSLISIL 338
Query: 80 SSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVV 139
S C+ LA+L G+Q+HA +V+ DV V S L++MY +CG L + F D++
Sbjct: 339 SVCATLASLQYGRQVHAHLVRCQFDGDVYVASVLMTMYVKCGELVKAKLVFDRFPSKDII 398
Query: 140 LWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLM 199
+W+S+I+ Y HG GEEA+ +F +M N VT +++L ACS+ G E+G+E F+ M
Sbjct: 399 MWNSIISGYASHGLGEEALKVFHEMPLSGTMPNKVTLIAILTACSYGGKLEEGLEIFESM 458
Query: 200 VKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDM 259
K+ P +EHY+C VD+LGR G +D+A LI +M +K +A +W LL ACKTH D+
Sbjct: 459 ESKFCVTPTVEHYSCTVDMLGRAGKVDKAMELINSMTIKPDATVWGALLGACKTHSRLDL 518
Query: 260 AGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKN 319
A A+++ + P++A PY+LLS+I+AS +W V+E R+ MR +NV K PG SW+E+
Sbjct: 519 AEVAAKKLFEIEPENAGPYILLSSINASRSKWGDVAEMRKNMRTKNVSKFPGCSWIEVGK 578
Query: 320 QVHQFTMGD-KSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSE 378
+VH FT G ++HP I + LE+ ++ GY PD +HD+D EEK +L HSE
Sbjct: 579 KVHMFTRGGIRNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSE 638
Query: 379 KLAIAFA--EHTRGLIVML------------PFKYISEIKNREIIVRDASRFHHFRNGKC 424
+LA+A+ + G+ + + K IS++ REII+RDA+RFHHF NG+C
Sbjct: 639 RLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGEC 698
Query: 425 SCGDY 429
SC DY
Sbjct: 699 SCRDY 703
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 88/171 (51%), Gaps = 6/171 (3%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F+ D+ S L MY+K G LV+ + V P +++I W ++I+G A +GL E+ L ++
Sbjct: 362 FDGDVYVASVLMTMYVKCGELVKAKLVFDRFPSKDIIMWNSIISGYASHGLGEEALKVFH 421
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEV-VKAGASLDVGVISSLISMYSRC 120
M + G P+K+T ++++++CS L +G +I + K + V S + M R
Sbjct: 422 EMPLSGTMPNKVTLIAILTACSYGGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRA 481
Query: 121 GCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFE 170
G +D +++ D +W +++ A H + ++L E +K FE
Sbjct: 482 GKVDKAMELINSMTIKPDATVWGALLGACKTHSR----LDLAEVAAKKLFE 528
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 118/248 (47%), Gaps = 18/248 (7%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E ++V+ + L Y+K+ + E V +MP RNV++W ++ G Q G+ V +
Sbjct: 76 ERNIVSWNGLVSGYIKNRMIEEARNVFEIMPERNVVSWTAMVKGYVQEGMV--VEAELLF 133
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
RM +++++ + + + ++++ + DV +++I R G
Sbjct: 134 WRMP--ERNEVSWTVMFGGLIDGGRIDDARKLYDMM----PGKDVVASTNMIGGLCREGR 187
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
+D++ + F E +V+ W++MI YG + + + A LFE M +K +V++ S+L
Sbjct: 188 VDEAREIFDEMRERNVITWTTMITGYGQNKRVDVARKLFEVMPEK----TEVSWTSMLLG 243
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
+ G E EFF++M KP + +V LG G + +A + M + NA
Sbjct: 244 YTLSGRIEDAEEFFEVM----PMKPVIACNAMIV-ALGEVGEIVKARRVFDQMEDRDNA- 297
Query: 243 IWKTLLSA 250
W+ ++ A
Sbjct: 298 TWRGMIKA 305
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 129/302 (42%), Gaps = 13/302 (4%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+VA +++ + G + E ++ M RNVI W T+I G QN + + +M
Sbjct: 171 DVVASTNMIGGLCREGRVDEAREIFDEMRERNVITWTTMITGYGQNKRVDVARKLFEVM- 229
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
P+K T VS S G+ + E + V +++I G +
Sbjct: 230 -----PEK-TEVSWTSMLLGYTLSGRIEDAE-EFFEVMPMKPVIACNAMIVALGEVGEIV 282
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ + F + E D W MI AY G EA+ LF QM+++ + + +S+L C+
Sbjct: 283 KARRVFDQMEDRDNATWRGMIKAYERKGFELEALELFAQMQRQGVRPSFPSLISILSVCA 342
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
+ G + +V + + + + ++ + +CG L +A + P K + I+W
Sbjct: 343 TLASLQYGRQVHAHLV-RCQFDGDVYVASVLMTMYVKCGELVKAKLVFDRFPSK-DIIMW 400
Query: 245 KTLLSACKTHKSTDMAGRIAEE--ILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMR 302
+++S +H + A ++ E + G P +L+ K +G+ F E+M
Sbjct: 401 NSIISGYASHGLGEEALKVFHEMPLSGTMPNKVTLIAILTACSYGGKLEEGLEIF-ESME 459
Query: 303 ER 304
+
Sbjct: 460 SK 461
>gi|12039323|gb|AAG46111.1|AC073166_9 hypothetical protein [Oryza sativa Japonica Group]
Length = 787
Score = 326 bits (835), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 174/446 (39%), Positives = 257/446 (57%), Gaps = 19/446 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +D+V +SL MY K+G L +V LM RN ++W +I+G AQNG +++ L +
Sbjct: 239 GMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLF 298
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVI--SSLISMYS 118
M+ G +PD VS + +CS + L G+ +H +V+ D I ++ I MYS
Sbjct: 299 RNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVR---RFDFNCILGTAAIDMYS 355
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+CG L + F D++LW++MIA G HG+G++A+ LF++M + + TF S
Sbjct: 356 KCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFAS 415
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
LL A SH GL E+G +F MV ++ P +HY C+VDLL R G ++EA+ L+ +M +
Sbjct: 416 LLSALSHSGLVEEGKLWFGRMVNHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAE 475
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
IW LLS C +K ++ IA+ IL + P D L+SN++A+ K+W V + R
Sbjct: 476 PTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSNLYAATKKWDKVRQVR 535
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
+ M++ KK PG S +EI+ H F M D+SHP+ EI + +L EM+ GY+P T
Sbjct: 536 KLMKDSGSKKMPGCSSIEIRGTRHVFVMEDQSHPQREEIVSKVAKLDLEMRKMGYIPRTE 595
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAF-----AEHTRGLIVML---------PFKYISEIK 404
HD++ E KE L +HSE+LAIAF TR +I+ KYIS+I
Sbjct: 596 FVYHDLEEEVKEQQLSYHSERLAIAFGLLNTGPGTRLVIIKNLRVCGDCHDAIKYISKIA 655
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
+REI+VRDA RFHHF++G CSC DYW
Sbjct: 656 DREIVVRDAKRFHHFKDGVCSCRDYW 681
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 145/290 (50%), Gaps = 5/290 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G++ D+ SSL H+Y + G++ + KV MP R+ + W T++AG G D + Y
Sbjct: 138 GYKDDVFVCSSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMY 197
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
MR G + D++ + VI +C+ + G +H +++ G +DV +SL+ MY++
Sbjct: 198 RRMREDGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKN 257
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G LD + + F + + V WS+MI+ + +G+ +EA+ LF M+ + + VS L
Sbjct: 258 GLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSAL 317
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACS+ G + G +V+++ L T +D+ +CG L A L NM +
Sbjct: 318 LACSNIGFLKLGRSVHGFIVRRFDFNCILG--TAAIDMYSKCGSLASAQMLF-NMISDRD 374
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLSNIHASA 288
I+W +++ C H A + +E+ G+ P A LLS + S
Sbjct: 375 LILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSG 424
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 4/210 (1%)
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
RPD TF +S+C+ L L G+ + AG DV V SSL+ +Y+R G + D+VK
Sbjct: 105 RPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVK 164
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F+ D V WS+M+A + G+ +AI ++ +M + + ++V + ++ AC+
Sbjct: 165 VFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARN 224
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
G +++ R + T +VD+ + G LD A + M V N + W ++
Sbjct: 225 VRMGASVHGHLLRHGMRMDVVT-ATSLVDMYAKNGLLDVACRVFGLM-VHRNDVSWSAMI 282
Query: 249 SACKTHKSTDMAGRIAEEIL--GVNPQDAA 276
S + +D A R+ + G+ P A
Sbjct: 283 SGFAQNGQSDEALRLFRNMQASGIQPDSGA 312
>gi|357123666|ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 742
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 170/434 (39%), Positives = 252/434 (58%), Gaps = 24/434 (5%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y K G + + M R+++ + +LI G G + L + MR R D T
Sbjct: 314 YCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALLLFMQMRRHDLRADNFTM 373
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
VS++++C+ L L QG+ +HA + + +D+ + ++L+ MY +CG ++++ F
Sbjct: 374 VSLLTACASLGALPQGRALHACIEQRLVEVDIYLGTALLDMYLKCGRVEEASLVFQAMSV 433
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
DV WS+MIA F+G G+ A+ F M+ F+ N VT++++L ACSH L ++G +
Sbjct: 434 RDVHTWSAMIAGLAFNGMGKAALEYFFWMKVDGFQPNSVTYIAILTACSHSCLLDEGRLY 493
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK 255
F+ M + +P +EHY C++DLLGR G LDEA L+R MP++ NA+IW ++LSAC+ HK
Sbjct: 494 FEEMRLLHNIRPLIEHYGCMIDLLGRSGLLDEAMDLVRTMPMQPNAVIWASILSACRVHK 553
Query: 256 STDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWL 315
++A AE +L + P + A YV L NI+ +++W+ S+ R M ER VKK G S +
Sbjct: 554 DANLARNAAEHLLKLEPDEDAVYVQLYNIYIDSRQWEDASQIRRLMEERGVKKAAGYSSI 613
Query: 316 EIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKH 375
+ QVH+F + D++HP+ MEI +EE+T +K GY P T D+D EEKE+ L
Sbjct: 614 TVAGQVHKFIVCDRTHPQIMEITAMMEEITRRLKSVGYSPITSQITVDVDEEEKEHALLA 673
Query: 376 HSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREIIVRDASRF 416
HSEK+AIAF GLI + P K IS I NREIIVRD SRF
Sbjct: 674 HSEKIAIAF-----GLISLAPNLPLHIIKNLRVCEDCHSAIKLISRIWNREIIVRDRSRF 728
Query: 417 HHFRNGKCSCGDYW 430
HHFR+G CSC D+W
Sbjct: 729 HHFRDGTCSCNDFW 742
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 139/279 (49%), Gaps = 38/279 (13%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D VA +++ K G L + ++R P RNVI+W LI+G ++ G A + +D +N M
Sbjct: 170 DAVAWTTVISGLAKLGLLDDAWCLLRHSPARNVISWTGLISGYSRAGRAAEAVDCFNSML 229
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG--- 121
G PD++T + ++S+C++L L G+ +H V + G + ++ +LI MY++CG
Sbjct: 230 SDGIEPDEVTVIGLLSACAQLKDLVFGRSLHKLVGEKGMLMSGKLVVALIDMYAKCGDIG 289
Query: 122 -------------------------C----LDDSVKTFLECEYSDVVLWSSMIAAYGFHG 152
C +D + F + E D+V ++S+I Y G
Sbjct: 290 RAWEVFDALGRGRRPQSWNAMIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHGG 349
Query: 153 KGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY 212
+ EA+ LF QM + + A++ T VSLL AC+ G +G + + R ++ Y
Sbjct: 350 RLREALLLFMQMRRHDLRADNFTMVSLLTACASLGALPQGRALHACIEQ---RLVEVDIY 406
Query: 213 --TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
T ++D+ +CG ++EA+ + + M V+ + W +++
Sbjct: 407 LGTALLDMYLKCGRVEEASLVFQAMSVR-DVHTWSAMIA 444
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 95/181 (52%), Gaps = 7/181 (3%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E+D+ G++L MY+K G + E V + M +R+V W +IAG A NG+ + L+ +
Sbjct: 402 EVDIYLGTALLDMYLKCGRVEEASLVFQAMSVRDVHTWSAMIAGLAFNGMGKAALEYFFW 461
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEV-VKAGASLDVGVISSLISMYSRCG 121
M++ GF+P+ +T+++++++CS L +G+ E+ + + +I + R G
Sbjct: 462 MKVDGFQPNSVTYIAILTACSHSCLLDEGRLYFEEMRLLHNIRPLIEHYGCMIDLLGRSG 521
Query: 122 CLD---DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
LD D V+T + V+W+S+++A H A N E + + E + D +V
Sbjct: 522 LLDEAMDLVRTMP--MQPNAVIWASILSACRVHKDANLARNAAEHLLKLEPD-EDAVYVQ 578
Query: 179 L 179
L
Sbjct: 579 L 579
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 84/226 (37%), Gaps = 57/226 (25%)
Query: 47 KAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSE-LATLGQGQQIHAEVVKAGASL 105
+A +G E L Y MR G D TF + C+ A + Q +HA +
Sbjct: 79 RASSG-PESPLILYRRMRRTGVCTDAFTFHFLFKCCARGRAHVLLCQMLHAACFRTMLPS 137
Query: 106 DVGVISS-LISMYSRCGCLDDSVKTFLECEYSDVVLWSS--------------------- 143
V ++S+ +I MY G D+ + F + D V W++
Sbjct: 138 AVPLVSNPIIHMYVELGLAGDARRAFDDIPVKDAVAWTTVISGLAKLGLLDDAWCLLRHS 197
Query: 144 ----------MIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS--------- 184
+I+ Y G+ EA++ F M E ++VT + LL AC+
Sbjct: 198 PARNVISWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACAQLKDLVFGR 257
Query: 185 --HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEA 228
H + EKGM LM K ++D+ +CG + A
Sbjct: 258 SLHKLVGEKGM----LMSGKL--------VVALIDMYAKCGDIGRA 291
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 166/440 (37%), Positives = 250/440 (56%), Gaps = 14/440 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D G++L MY K+ L + + R++ +W +I+G AQ AE + + M+
Sbjct: 287 DDFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQ 346
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G +P++ T S +S CS +ATL G+Q+HA VKAG D+ V S+L+ +Y +CGC++
Sbjct: 347 REGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCME 406
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ F D+V W+++I+ Y HG+GE+A+ F M + ++ TF+ +L ACS
Sbjct: 407 HAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACS 466
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
GL E+G + FD M K Y P +EHY C+VD+LGR G +E I M + ++IW
Sbjct: 467 FMGLVEEGKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIW 526
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
+T+L ACK H + D + A+++ + P + Y+LLSNI AS RW V R M R
Sbjct: 527 ETVLGACKLHGNVDFGEKAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRALMTSR 586
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
+KKEPG SW+E+ QVH F D SHP+ EI L++L + GYVP T +H++
Sbjct: 587 GIKKEPGCSWVEVDGQVHVFLSQDGSHPKIREIYAKLDKLGQSLMSIGYVPKTEVVLHNV 646
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPF--------------KYISEIKNREIIV 410
++EK +L +HSE+LA++FA + + + K IS+I N+EI+V
Sbjct: 647 SNKEKMEHLYYHSERLALSFALLSTNAVKPIRIFKNLRICEDCHDFMKLISDITNQEIVV 706
Query: 411 RDASRFHHFRNGKCSCGDYW 430
RD RFHHF+ G CSC D W
Sbjct: 707 RDIRRFHHFKRGTCSCQDRW 726
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 145/290 (50%), Gaps = 16/290 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE D + + L MYMKS + +G KV M ++++W L++G + +
Sbjct: 182 GFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIF 241
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M + GF+P+ TF+SV+ SCS L G+Q+HA ++K + D V ++L+ MY++
Sbjct: 242 YQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKA 301
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
CL+D+ F D+ W+ +I+ Y + E+A+ F QM+++ + N+ T S L
Sbjct: 302 RCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCL 361
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY------TCVVDLLGRCGYLDEAAALIRN 234
CSH E G + + VK H+ + +VDL G+CG ++ A A+ +
Sbjct: 362 SGCSHMATLENGRQLHAVAVKA-------GHFGDIFVGSALVDLYGKCGCMEHAEAIFKG 414
Query: 235 MPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLS 282
+ + + + W T++S H + A +L G+ P +A +LS
Sbjct: 415 L-ISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLS 463
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 124/260 (47%), Gaps = 5/260 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E+D G SL MY K G++ + KV + +V+AW +I G Q G ++ + +
Sbjct: 81 GCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAMITGLDQQGHGQEAAELF 140
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+LMR G RP++ T S++S+ + + L GQ IH + K G D V + LI MY +
Sbjct: 141 HLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFESDNLVSNPLIMMYMKS 200
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
C++D K F D+V W+++++ + +F QM + F+ N TF+S+L
Sbjct: 201 RCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFISVL 260
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
+CS E G + ++K T +VD+ + L++A + V +
Sbjct: 261 RSCSSLLDPEFGKQVHAHIIKNSSDDDDFVG-TALVDMYAKARCLEDAGVAFDRL-VNRD 318
Query: 241 AIIWKTLLSACKTHKSTDMA 260
W ++S + TD A
Sbjct: 319 IFSWTVIISG---YAQTDQA 335
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 118/251 (47%), Gaps = 6/251 (2%)
Query: 26 EKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSEL 85
E++ MP +N ++W L+ G AQ G + VL + M+ + K T +V+ C+
Sbjct: 5 ERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCANT 64
Query: 86 ATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMI 145
+L +G+ +HA +++G +D + SL+ MYS+CG + D++K F + DVV WS+MI
Sbjct: 65 GSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAMI 124
Query: 146 AAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVK-KYR 204
G G+EA LF M +K N T SL+ ++ G G + K +
Sbjct: 125 TGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFE 184
Query: 205 RKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIA 264
+ + ++ + RC +++ + M + + W LLS ++ RI
Sbjct: 185 SDNLVSNPLIMMYMKSRC--VEDGNKVFEAM-TNPDLVSWNALLSGFYDSQTCGRGPRIF 241
Query: 265 EEIL--GVNPQ 273
++L G P
Sbjct: 242 YQMLLEGFKPN 252
>gi|449461943|ref|XP_004148701.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Cucumis sativus]
gi|449517215|ref|XP_004165641.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Cucumis sativus]
Length = 706
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 171/445 (38%), Positives = 264/445 (59%), Gaps = 16/445 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D+ +L MY K GSL + V MP + ++ W ++IAG A +G +E+ LD Y
Sbjct: 263 GLGQDIFVSCALIDMYSKCGSLEDAHCVFDEMPDKTIVGWNSIIAGYALHGYSEEALDLY 322
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ MR G + D TF +I CS LA++ + +Q+HA +V+ G LDV ++L+ YS+
Sbjct: 323 HEMRDSGVKMDHFTFSIIIRICSRLASVARAKQVHASLVRNGFGLDVVANTALVDFYSKW 382
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +DD+ F +++ W+++IA YG HG GEEAI++FE+M ++ N VTF+++L
Sbjct: 383 GKVDDARHVFDRMSCRNIISWNALIAGYGNHGHGEEAIDMFEKMLREGMMPNHVTFLAVL 442
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACS GL E+G E F M + ++ KPR H+ C+++LLGR G LDEA ALIR P +
Sbjct: 443 SACSISGLFERGWEIFQSMTRDHKVKPRAMHFACMIELLGREGLLDEAYALIRKAPFQPT 502
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A +W LL AC+ H + ++ AE++ G+ P+ + Y++L NI+ S+ + + ++ +
Sbjct: 503 ANMWAALLRACRVHGNLELGKFAAEKLYGMEPEKLSNYIVLLNIYNSSGKLKEAADVFQT 562
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
++ + ++ P SW+E+ NQ H F GDK H + ++ ++EL + GYVP+
Sbjct: 563 LKRKGLRMLPACSWIEVNNQPHAFLSGDKHHVQIEKVVGKVDELMLNISKLGYVPEEQNF 622
Query: 361 M-HDMDSEEKEYNLKHHSEKLAIAFA-----EHTRGLIVM---------LPFKYISEIKN 405
M D+D E++ + +HSEKLAIA+ E T IV K I+ I
Sbjct: 623 MLPDVDENEEKIRM-YHSEKLAIAYGLLNTLEKTPLQIVQSHRICSDCHSVIKLIAMITK 681
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
REI++RDASRFHHFR+G CSCGDYW
Sbjct: 682 REIVIRDASRFHHFRDGSCSCGDYW 706
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 150/309 (48%), Gaps = 4/309 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE D + + M++K G +++ ++ MP RN ++W T+I+G +G + +
Sbjct: 162 GFEPDQYMRNRVLLMHVKCGMMIDACRLFDEMPARNAVSWGTIISGYVDSGNYVEAFRLF 221
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
LMR + TF ++I + + L + G+Q+H+ +KAG D+ V +LI MYS+C
Sbjct: 222 ILMREEFYDCGPRTFATMIRASAGLEIIFPGRQLHSCAIKAGLGQDIFVSCALIDMYSKC 281
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L+D+ F E +V W+S+IA Y HG EEA++L+ +M + + TF ++
Sbjct: 282 GSLEDAHCVFDEMPDKTIVGWNSIIAGYALHGYSEEALDLYHEMRDSGVKMDHFTFSIII 341
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
CS + + +V+ + + T +VD + G +D+A + M + N
Sbjct: 342 RICSRLASVARAKQVHASLVRNGFGLDVVAN-TALVDFYSKWGKVDDARHVFDRMSCR-N 399
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
I W L++ H + A + E++L G+ P +LS S +G F+
Sbjct: 400 IISWNALIAGYGNHGHGEEAIDMFEKMLREGMMPNHVTFLAVLSACSISGLFERGWEIFQ 459
Query: 299 EAMRERNVK 307
R+ VK
Sbjct: 460 SMTRDHKVK 468
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 102/215 (47%), Gaps = 5/215 (2%)
Query: 55 DVLDQYNLMRMV-GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSL 113
D L+ + + + GF T+ ++I++C L ++ +++ +V G D + + +
Sbjct: 114 DALEMFEIFELEDGFHVGYSTYDALINACIGLKSIRGVKRLCNYMVDNGFEPDQYMRNRV 173
Query: 114 ISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEAND 173
+ M+ +CG + D+ + F E + V W ++I+ Y G EA LF M ++ ++
Sbjct: 174 LLMHVKCGMMIDACRLFDEMPARNAVSWGTIISGYVDSGNYVEAFRLFILMREEFYDCGP 233
Query: 174 VTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC-VVDLLGRCGYLDEAAALI 232
TF +++ A + + G + +K + +C ++D+ +CG L++A +
Sbjct: 234 RTFATMIRASAGLEIIFPGRQLHSCAIKAGLGQDIF--VSCALIDMYSKCGSLEDAHCVF 291
Query: 233 RNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEI 267
MP K + W ++++ H ++ A + E+
Sbjct: 292 DEMPDKT-IVGWNSIIAGYALHGYSEEALDLYHEM 325
>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
Length = 675
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 170/434 (39%), Positives = 246/434 (56%), Gaps = 14/434 (3%)
Query: 11 SLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRP 70
SL Y + K+ +NV+ W L+ N +D L + M +G P
Sbjct: 242 SLITFYANCMKIEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALP 301
Query: 71 DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTF 130
++ TF + +C L L +G++IH +K G DV V +SL+ MY+ CG ++ +V F
Sbjct: 302 NQSTFSITLKACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVF 361
Query: 131 LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKE 190
D+V W+S+I HG G A+ F QM ++ + N++TF LL ACS G+
Sbjct: 362 RNINEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFTGLLSACSRSGMLL 421
Query: 191 KGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
KG FF+ + + R +HY C+VD+LGRCG LDEA L+R MPVKAN++IW LLSA
Sbjct: 422 KGRCFFEYISRYKSNVLRPQHYACMVDILGRCGKLDEAEELVRYMPVKANSMIWLALLSA 481
Query: 251 CKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEP 310
C+ H + ++A R A+ IL + P ++ YVLLSNI+ASA RW VS R M++ + K+P
Sbjct: 482 CRVHSNLEVAERAAKHILDLEPNCSSAYVLLSNIYASAGRWADVSRMRVKMKQGGLVKQP 541
Query: 311 GVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKE 370
G SW+ ++ + H+F D+SHP S I L+ L ++K GYVPD +HD++ E+KE
Sbjct: 542 GSSWVVLRGKKHEFLSADRSHPLSERIYEKLDWLGKKLKEFGYVPDQKFALHDVEDEQKE 601
Query: 371 YNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNREIIVRDASRF 416
L HSE+LAIAF G + + K +S+I R+I+VRD+ RF
Sbjct: 602 EMLSFHSERLAIAFGLVSTVEGSTITVMKNLRVCGDCHSVIKLMSKIVGRKIVVRDSGRF 661
Query: 417 HHFRNGKCSCGDYW 430
HHF+NG CSC DYW
Sbjct: 662 HHFKNGICSCSDYW 675
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 149/310 (48%), Gaps = 8/310 (2%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ A +++ H Y ++G + EG ++ MP+R+VI+W ++I G NG +E+ L + M
Sbjct: 135 DVAAWNAMVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKML 194
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G P TF V+S+C+ G Q+H VVK G + SLI+ Y+ C ++
Sbjct: 195 RSGVEPTWSTFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKIE 254
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ K F E +VV W++++ AY ++ K ++A+ +F M + N TF L AC
Sbjct: 255 HAHKIFNETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKAC- 313
Query: 185 HCGLK--EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
CGL+ +KG E + +K + VV + CG ++ A A+ RN+ K + +
Sbjct: 314 -CGLEALDKGKEIHTMAIKLGLETDVFVGNSLVV-MYTECGNVNSAVAVFRNINEK-DIV 370
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
W +++ H A +++ GV+P + LLS S +G F
Sbjct: 371 SWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFTGLLSACSRSGMLLKGRCFFEYI 430
Query: 301 MRERNVKKEP 310
R ++ P
Sbjct: 431 SRYKSNVLRP 440
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 85/160 (53%), Gaps = 4/160 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E D+ G+SL MY + G++ V R + +++++W ++I G AQ+G L +
Sbjct: 333 GLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKDIVSWNSIIVGSAQHGFGLWALIFF 392
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGAS-LDVGVISSLISMYSR 119
N M G P++ITF ++S+CS L +G+ + + ++ L + ++ + R
Sbjct: 393 NQMIRRGVDPNEITFTGLLSACSRSGMLLKGRCFFEYISRYKSNVLRPQHYACMVDILGR 452
Query: 120 CGCLDDS--VKTFLECEYSDVVLWSSMIAAYGFHGKGEEA 157
CG LD++ + ++ + ++ ++W ++++A H E A
Sbjct: 453 CGKLDEAEELVRYMPVK-ANSMIWLALLSACRVHSNLEVA 491
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 105/213 (49%), Gaps = 14/213 (6%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
+ L +SLA+ ++K+ L + + +P N+ + +IAG +N D L ++ M
Sbjct: 11 ITLSYTTSLAN-HLKNQRLDQARLIFDKIPSPNLHLYTKMIAGYTRNDRLCDALKLFDRM 69
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
+ D +++ S+I C + LG ++ E+ + +V +++++ Y + G +
Sbjct: 70 SV----RDVVSWNSMIKGCLDCGNLGMATRLFDEMPEK----NVISWTTMVNGYLKFGRV 121
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
+ + + FL+ DV W++M+ Y +G+ EE + LFE+M ++ +++ S++
Sbjct: 122 ELAQRLFLDMHVKDVAAWNAMVHGYFENGRVEEGVRLFEEMPVRDV----ISWTSMIGGL 177
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVV 216
G E+ + F M++ +P + CV+
Sbjct: 178 DLNGKSEEALFVFKKMLRS-GVEPTWSTFACVL 209
>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 615
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 167/443 (37%), Positives = 265/443 (59%), Gaps = 15/443 (3%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
FE + GSSL MY KS ++ E +V +P R+V++ +I+G AQ GL E+ LD +
Sbjct: 174 FESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFR 233
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
+ G + + +TF +++++ S LA+L G+Q+HA +++ V + +SLI MYS+CG
Sbjct: 234 QLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCG 293
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
L S + F VV W++M+ YG HG G E I+LF+ + KE + + VT +++L
Sbjct: 294 KLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDL-HKEVKPDSVTLLAVLS 352
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
CSH GL ++G++ FD +VK+ HY C++DLLGR G L++A LI NMP ++
Sbjct: 353 GCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTP 412
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
IW +LL AC+ H + + +A+++L + P++A YV+LSNI+A+A W+ V + R+ M
Sbjct: 413 SIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWKDVFKVRKLM 472
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
E+ V KEPG SW+ + +H F ++ HP +I+ ++E+ ++K G+VPD +
Sbjct: 473 LEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIKAAGFVPDLSCVL 532
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVMLP------------FKYISEIKNRE 407
HD+D E+KE L HSEKLAI F GL + + K++S++ RE
Sbjct: 533 HDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIRVMKNLRICVDCHNFAKFVSKVYERE 592
Query: 408 IIVRDASRFHHFRNGKCSCGDYW 430
I +RD +RFH +G C+CGDYW
Sbjct: 593 ISLRDKNRFHLLTHGNCTCGDYW 615
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 132/250 (52%), Gaps = 10/250 (4%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G+ L MY++ G+L + V+ MP R+V++W T+I+G +Q + LD + M G
Sbjct: 80 GTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGC 139
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
P++ T +V++SCS ++ QG+Q+H+ +VK + V SSL+ MY++ + ++ +
Sbjct: 140 IPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARR 199
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F DVV +++I+ Y G EEA++LF Q+ + + N VTF +L+ A S
Sbjct: 200 VFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLAS 259
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTC----VVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
+ G + L+++K L + ++D+ +CG L + + NM ++ + + W
Sbjct: 260 LDYGKQVHALILRK-----ELPFFVALQNSLIDMYSKCGKLLYSRRVFDNM-LERSVVSW 313
Query: 245 KTLLSACKTH 254
+L H
Sbjct: 314 NAMLMGYGRH 323
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 68/127 (53%)
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
+ + I++C E L +G+Q+HA ++ A V + + L++MY RCG LDD+
Sbjct: 45 YEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP 104
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGME 194
VV W++MI+ Y + EA++LF +M + N+ T ++L +CS +G +
Sbjct: 105 ERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQ 164
Query: 195 FFDLMVK 201
L+VK
Sbjct: 165 VHSLLVK 171
>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
Length = 829
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 171/452 (37%), Positives = 264/452 (58%), Gaps = 23/452 (5%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
E +++ G++L MY K GS E V M R++I+W T+I+ + L + +
Sbjct: 378 LEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQ 437
Query: 62 LMRMV-------GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLI 114
M + +PD + FV+++++C++++ L QG+ + + G S D V ++++
Sbjct: 438 QMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVV 497
Query: 115 SMYSRCGCLDDSVKTFLE-CEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEAND 173
++Y +CG +++ + F C DV LW++MIA Y G+ EA+ LF +ME + +
Sbjct: 498 NLYGKCGEIEEGRRIFDGVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDS 557
Query: 174 VTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPR-LEHYTCVVDLLGRCGYLDEAAALI 232
+FVS+L ACSH GL+++G +F M +YR R ++H+ CV DLLGR G L EA +
Sbjct: 558 FSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFL 617
Query: 233 RNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQ 292
+PVK +A+ W +LL+AC+ H+ A +A ++L + P+ A YV LSNI+A ++W
Sbjct: 618 EKLPVKPDAVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWH 677
Query: 293 GVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRG 352
V++ R+ M E+ VKKE GVS +EI +H F GD +HPR+ EI L +L S+MK G
Sbjct: 678 AVAKVRKFMAEQGVKKERGVSTIEIGKYMHDFATGDDAHPRNREIREELAKLHSQMKECG 737
Query: 353 YVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFA----------EHTRGLIVM----LPFK 398
YVPDT +H +D +EKE L HSE+LAIA T+ L V K
Sbjct: 738 YVPDTKMVLHFVDEQEKERLLFSHSERLAIALGLISTPLGTPLRVTKNLRVCSDCHTATK 797
Query: 399 YISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
IS+I R+I+VRD +RFH F++GKCSC DYW
Sbjct: 798 LISKIAGRKIVVRDPTRFHLFKDGKCSCQDYW 829
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 168/328 (51%), Gaps = 32/328 (9%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLM--PIRNVIAWITLIAGKAQNGLAEDVLD 58
GFE +L+ +++ MY + G++ E KV M +R+V++W +++ N +D +
Sbjct: 277 GFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQ 336
Query: 59 QYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
Y M++ R DK+T+VS++S+CS +G G+ +H ++V +V V ++L+SMY+
Sbjct: 337 LYQRMQL---RADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYA 393
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM-------EQKEFEA 171
+CG ++ F + E ++ W+++I+AY EA +LF+QM + +
Sbjct: 394 KCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKP 453
Query: 172 NDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEH----YTCVVDLLGRCGYLDE 227
+ + FV++L AC+ E+G MV + L T VV+L G+CG ++E
Sbjct: 454 DALAFVTILNACADVSALEQGK-----MVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEE 508
Query: 228 AAALIRNMPVKANAIIWKTLLSA----CKTHKSTDMAGRIAEEILGVNPQDAAPYV--LL 281
+ + + + +W +++ ++H++ + R+ E+ GV P D+ +V LL
Sbjct: 509 GRRIFDGVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRM--EMEGVRP-DSFSFVSILL 565
Query: 282 SNIHASAKRWQGVSEFREAMRE-RNVKK 308
+ H + QG S F E RNV +
Sbjct: 566 ACSHTGLED-QGKSYFTSMTTEYRNVTR 592
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 135/252 (53%), Gaps = 8/252 (3%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMP-IRNVIAWITLIAGKAQNGLAEDVLDQY 60
E+D ++L +MY K GSL ++V M RNVI+W + A +G + L +
Sbjct: 176 LEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGAHALHGNVWEALRHF 235
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M ++G + K V+++S+CS A + G+ IH+ + +G ++ V +++++MY RC
Sbjct: 236 RFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSCIALSGFESELLVANAVMTMYGRC 295
Query: 121 GCLDDSVKTF--LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
G ++++ K F ++ DVV W+ M++AY + +G++AI L+++M + A+ VT+VS
Sbjct: 296 GAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQLYQRM---QLRADKVTYVS 352
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
LL ACS G +V K + +V + +CG EA A+ M +
Sbjct: 353 LLSACSSAEDVGLGRVLHKQIVNDELEKNVIVG-NALVSMYAKCGSHTEARAVFDKMEQR 411
Query: 239 ANAIIWKTLLSA 250
+ I W T++SA
Sbjct: 412 -SIISWTTIISA 422
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 121/248 (48%), Gaps = 3/248 (1%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
+L+ G+ + MY S + + + RN+ +W L+A A +G +++ L MR
Sbjct: 78 NLILGNHIVSMYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMR 137
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G RPD +TF++ + SC + +L G +IH VV + +D V ++L++MY +CG L
Sbjct: 138 QDGVRPDAVTFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLS 197
Query: 125 DSVKTFLECEYS-DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
+ + F + E + +V+ WS M A+ HG EA+ F M +A V++L AC
Sbjct: 198 HAKRVFAKMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSAC 257
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
S L + G + + L V+ + GRCG ++EA + M ++
Sbjct: 258 SSPALVQDG-RLIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVV 316
Query: 244 -WKTLLSA 250
W +LSA
Sbjct: 317 SWNIMLSA 324
>gi|22328607|ref|NP_193141.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635650|sp|O23266.3|PP308_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14050, mitochondrial; Flags: Precursor
gi|332657965|gb|AEE83365.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 175/448 (39%), Positives = 256/448 (57%), Gaps = 27/448 (6%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
+ ++ +++ Y KSG E ++ R++P++N+ +W LI+G Q+G + + MR
Sbjct: 170 NTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMR 229
Query: 65 MVGFRP-DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
D + S++ +C+ LA G+Q+H V+ G V + ++LI MY++C +
Sbjct: 230 RERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDV 289
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
+ F + DVV W+S+I HG+ E+A+ L++ M + N+VTFV L+YAC
Sbjct: 290 IAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYAC 349
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
SH G EKG E F M K Y +P L+HYTC++DLLGR G LDEA LI MP +
Sbjct: 350 SHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPT 409
Query: 244 WKTLLSACKTHKSTDMAGRIAEEIL-GVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMR 302
W LLSACK M RIA+ ++ +D + Y+LLSNI+ASA W VSE R +
Sbjct: 410 WAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLG 469
Query: 303 ERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLR-GYVPDTGADM 361
E V+K+PG S +E++ + F G+ SHP +I L++L EM++R GYVPDT +
Sbjct: 470 EMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWIL 529
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISE 402
HDMD +EKE L HSE+ A+A+ GL+ +P K+ISE
Sbjct: 530 HDMDEQEKEKLLFWHSERSAVAY-----GLLKAVPGTPIRIVKNLRVCGDCHVVLKHISE 584
Query: 403 IKNREIIVRDASRFHHFRNGKCSCGDYW 430
I REIIVRDA+R+HHF+ GKCSC D+W
Sbjct: 585 ITEREIIVRDATRYHHFKGGKCSCNDFW 612
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 109/223 (48%), Gaps = 8/223 (3%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVG- 67
++L ++Y K G+ +V MP R+ IAW +++ Q L+ L ++ +
Sbjct: 41 ANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSG 100
Query: 68 FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV 127
RPD F +++ +C+ L ++ G+Q+H + + + D V SSL+ MY++CG L+ +
Sbjct: 101 LRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAK 160
Query: 128 KTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCG 187
F + + W++M++ Y G+ EEA+ LF + K N ++ +L+ G
Sbjct: 161 AVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVK----NLYSWTALISGFVQSG 216
Query: 188 LKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAA 230
KG+E F + + R + + + ++G C L + A
Sbjct: 217 ---KGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIA 256
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 104/229 (45%), Gaps = 15/229 (6%)
Query: 82 CSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLW 141
C+ TL + +HA +VK G + ++L+++Y +CG +++ F E + D + W
Sbjct: 13 CARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAW 72
Query: 142 SSMIAAYG-FHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFF-DLM 199
+S++ A + G+ +D F +L+ AC++ G + G + +
Sbjct: 73 ASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFI 132
Query: 200 VKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDM 259
V +Y ++ + +VD+ +CG L+ A A+ ++ VK N I W ++S
Sbjct: 133 VSEYANDEVVK--SSLVDMYAKCGLLNSAKAVFDSIRVK-NTISWTAMVSGYAK------ 183
Query: 260 AGRIAE--EILGVNPQDA--APYVLLSNIHASAKRWQGVSEFREAMRER 304
+GR E E+ + P + L+S S K + S F E RER
Sbjct: 184 SGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRER 232
>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
Length = 903
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 177/448 (39%), Positives = 269/448 (60%), Gaps = 19/448 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRN---VIAWITLIAGKAQNGLAEDVL 57
G+ + G+++ MY G++ E + + + V++W +I+ +Q+G + L
Sbjct: 457 GYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRAL 516
Query: 58 DQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMY 117
+ M + G P++IT V+V+ +C+ A L +G+ +H + +G ++ V ++L SMY
Sbjct: 517 GFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGEIVHDHLRHSGMESNLFVATALASMY 576
Query: 118 SRCGCLDDSVKTFLECEYS-DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
RCG L+ + + F + DVV++++MIAAY +G EA+ LF +M+Q+ ++ +F
Sbjct: 577 GRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSF 636
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
VS+L ACSH GL ++G E F M + Y P +HY C VD+LGR G+L +A LIR M
Sbjct: 637 VSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMD 696
Query: 237 VKANAIIWKTLLSACKTHKSTDMAGRIAEEILG-VNPQDAAPYVLLSNIHASAKRWQGVS 295
VK ++WKTLL AC+ ++ D GR+A ++ ++P D + YV+LSNI A A +W +
Sbjct: 697 VKPTVLVWKTLLGACRKYRDVDR-GRLANSMVRELDPGDESAYVVLSNILAGAGKWDEAA 755
Query: 296 EFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVP 355
E R M R ++KE G SW+EIK++VH+F GD+SHPRS EI LE L +E++ GYVP
Sbjct: 756 EVRTEMESRGLRKEAGKSWIEIKSRVHEFVAGDRSHPRSEEIYRELERLHAEIREIGYVP 815
Query: 356 DTGADMHDMDSEEKEYNLKHHSEKLAIAF---AEHTRGLIVMLPF----------KYISE 402
DT + +D EKE L HSE+LAIA + T + VM K+IS+
Sbjct: 816 DTRLVLRKVDEAEKERLLCQHSERLAIALGVMSSSTDTVRVMKNLRVCEDCHNATKFISK 875
Query: 403 IKNREIIVRDASRFHHFRNGKCSCGDYW 430
I N+EI+VRD RFHHF +G CSCGDYW
Sbjct: 876 IVNKEIVVRDTHRFHHFVDGSCSCGDYW 903
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 136/274 (49%), Gaps = 10/274 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E +L G+ L +Y+K SL + E+V + +R+ +W T+I ++G A+ + +
Sbjct: 59 GLEEEL--GNHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITAYTEHGQAKRAIGMF 116
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M+ G R D +TF++V+ +C+ L L QG+ IHA +V++G + + L+ +Y C
Sbjct: 117 HRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLKGKSVLANLLLHIYGSC 176
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
GC+ ++ F + E D+V W++ IAA G A+ LF++M+ + +T V L
Sbjct: 177 GCVASAMLLFEKME-RDLVSWNAAIAANAQSGDLGIALELFQRMQLEGVRPARITLVIAL 235
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
C+ + + +V++ + L T + R G+L +A + + + +
Sbjct: 236 TVCATI----RQAQAIHFIVRESGLEQTLVVSTALASAYARLGHLYQAKEVF-DRAAERD 290
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNP 272
+ W +L A H A + +L G++P
Sbjct: 291 VVSWNAMLGAYAQHGHMSEAALLFARMLHEGISP 324
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 145/310 (46%), Gaps = 30/310 (9%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + V + L H+Y G + + M R++++W IA AQ+G L+ +
Sbjct: 158 GLKGKSVLANLLLHIYGSCGCVASAMLLFEKME-RDLVSWNAAIAANAQSGDLGIALELF 216
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M++ G RP +IT V ++ C AT+ Q Q IH V ++G + V ++L S Y+R
Sbjct: 217 QRMQLEGVRPARITLVIALTVC---ATIRQAQAIHFIVRESGLEQTLVVSTALASAYARL 273
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L + + F DVV W++M+ AY HG EA LF +M + + VT V+
Sbjct: 274 GHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVTLVNAS 333
Query: 181 YACSH---------CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAAL 231
CS C L EKG++ D+++ ++D+ RCG +EA L
Sbjct: 334 TGCSSLRFGRMIHGCAL-EKGLD-RDIVLG-----------NALLDMYTRCGSPEEARHL 380
Query: 232 IRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAE--EILGVNPQDAAPYVLLSNIHASAK 289
+ +P NA+ W T+++ A + + ++ G+ P A LL + ++ +
Sbjct: 381 FKRIPC--NAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPE 438
Query: 290 RWQGVSEFRE 299
+ ++E R+
Sbjct: 439 EARAMAEGRK 448
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 129/263 (49%), Gaps = 17/263 (6%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E LV ++LA Y + G L + ++V R+V++W ++ AQ+G + +
Sbjct: 255 GLEQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLF 314
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G P K+T V+ + CS L G+ IH ++ G D+ + ++L+ MY+RC
Sbjct: 315 ARMLHEGISPSKVTLVNASTGCSSLRF---GRMIHGCALEKGLDRDIVLGNALLDMYTRC 371
Query: 121 GCLDDSVKTF--LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
G +++ F + C + V W++MIA G+ + A+ LF++M+ + T+++
Sbjct: 372 GSPEEARHLFKRIPC---NAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLN 428
Query: 179 LLYACSHCGLKEKGM----EFFDLMVK-KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIR 233
LL A + + + M + +V Y +P + T VV + CG +DEAAA +
Sbjct: 429 LLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIG--TAVVKMYASCGAIDEAAASFQ 486
Query: 234 N--MPVKANAIIWKTLLSACKTH 254
M + + + W ++S+ H
Sbjct: 487 RGAMEDRHDVVSWNAIISSLSQH 509
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 90/177 (50%), Gaps = 7/177 (3%)
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
V ++ + + L QG++IHA +V G ++G + L+ +Y +C L D + F E
Sbjct: 32 LVRLLRAAGDDRLLSQGRRIHARIVSLGLEEELG--NHLLRLYLKCESLGDVEEVFSRLE 89
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGME 194
D W+++I AY HG+ + AI +F +M+Q+ + VTF+++L AC+ G +G
Sbjct: 90 VRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRS 149
Query: 195 FFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+V+ + K L + ++ + G CG + A L M + + + W ++A
Sbjct: 150 IHAWIVESGLKGKSVLANL--LLHIYGSCGCVASAMLLFEKM--ERDLVSWNAAIAA 202
>gi|296088738|emb|CBI38188.3| unnamed protein product [Vitis vinifera]
Length = 744
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 172/480 (35%), Positives = 271/480 (56%), Gaps = 57/480 (11%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
+ELDL G +L +Y KSG + + + +P ++VI W +IA AQ+ +++ ++ +
Sbjct: 271 YELDLYVGVALLDLYTKSGDIDDARRAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFF 330
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
MR P++ TF SV+ +C+ + L G QIH V+K G DV V ++L+ +Y++CG
Sbjct: 331 QMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCG 390
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVT------ 175
+++S++ F E + + V W+++I + G GE+A+ LF M + +A +VT
Sbjct: 391 RMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALR 450
Query: 176 -------------------------FVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLE 210
FV +L AC++ GL ++G +F M++ + +P +E
Sbjct: 451 ACASLAALEPGLQIHSLTVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIE 510
Query: 211 HYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGV 270
HYTC+V LLGR G+LD+A LI +P + + ++W+ LL AC H ++ A+ +L +
Sbjct: 511 HYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQRVLEM 570
Query: 271 NPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKS 330
PQD A +VLLSN++A+AKRW V+ R+ M+ + VKKEPG+SW+E + VH FT+GD S
Sbjct: 571 EPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTS 630
Query: 331 HPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRG 390
HP I+ LE L + K GY+P+ + D++ EEKE L HSE+LA++F
Sbjct: 631 HPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEEKERLLWVHSERLALSFG----- 685
Query: 391 LIVMLP--------------------FKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
I+ P K IS++ REI+VRD +RFHHF+ G CSCGDYW
Sbjct: 686 -IIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQREIVVRDINRFHHFQEGLCSCGDYW 744
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 127/259 (49%), Gaps = 24/259 (9%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E + G++L Y G + +V + +++++W ++ A+N ++ L +
Sbjct: 169 GHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLF 228
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ MRMVGF+P+ TF SV +C L G+ +H +K+ LD+ V +L+ +Y++
Sbjct: 229 SQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKS 288
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +DD+ + F E DV+ WS MIA Y + +EA+ +F QM Q N TF S+L
Sbjct: 289 GDIDDARRAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVL 348
Query: 181 YACS-----------HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAA 229
AC+ HC + + G+ D+ V ++D+ +CG ++ +
Sbjct: 349 QACATMEGLNLGNQIHCHVIKIGLH-SDVFVS-----------NALMDVYAKCGRMENSM 396
Query: 230 ALIRNMPVKANAIIWKTLL 248
L P + N + W T++
Sbjct: 397 ELFAESPHR-NDVTWNTVI 414
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 125/257 (48%), Gaps = 24/257 (9%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
LDL A + L +MY+KS L + K+ MP RN I+++TLI G A++ + ++ + +
Sbjct: 71 LDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRL 130
Query: 64 RMVGFRPDKITFVSVI-----SSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
G + F +++ + C EL G IHA + K G + V ++LI YS
Sbjct: 131 HREGHELNPFVFTTILKLLVSTDCGEL-----GWGIHACIFKLGHESNAFVGTALIDAYS 185
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
CG +D + + F Y D+V W+ M+ + + +EA+ LF QM F+ N+ TF S
Sbjct: 186 VCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFAS 245
Query: 179 LLYACSHCGLKEKGMEFFDL------MVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALI 232
+ AC G+E FD+ K R + L ++DL + G +D+A
Sbjct: 246 VFKAC-------LGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARRAF 298
Query: 233 RNMPVKANAIIWKTLLS 249
+P K + I W +++
Sbjct: 299 EEIP-KKDVIPWSFMIA 314
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 86/189 (45%), Gaps = 14/189 (7%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D+ ++L +Y K G + ++ P RN + W T+I G Q G E L +
Sbjct: 371 GLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLF 430
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M + ++T+ S + +C+ LA L G QIH+ VK VGV+S+ +
Sbjct: 431 LNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKPDKLTFVGVLSAC----ANA 486
Query: 121 GCLDDSVKTFLECEYSD------VVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDV 174
G LD + + D + ++ M+ G G ++A+ L +++ F+ + +
Sbjct: 487 GLLDQG-QAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEI---PFQPSVM 542
Query: 175 TFVSLLYAC 183
+ +LL AC
Sbjct: 543 VWRALLGAC 551
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 54/107 (50%)
Query: 74 TFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLEC 133
+ + + C + +G+ +H E++K G LD+ + L++MY + L D+ K F E
Sbjct: 40 AYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEM 99
Query: 134 EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
+ + + ++I Y + EAI LF ++ ++ E N F ++L
Sbjct: 100 PERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTIL 146
>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
Length = 583
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 167/443 (37%), Positives = 265/443 (59%), Gaps = 15/443 (3%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
FE + GSSL MY KS ++ E +V +P R+V++ +I+G AQ GL E+ LD +
Sbjct: 142 FESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFR 201
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
+ G + + +TF +++++ S LA+L G+Q+HA +++ V + +SLI MYS+CG
Sbjct: 202 QLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCG 261
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
L S + F VV W++M+ YG HG G E I+LF+ + KE + + VT +++L
Sbjct: 262 KLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDL-HKEVKPDSVTLLAVLS 320
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
CSH GL ++G++ FD +VK+ HY C++DLLGR G L++A LI NMP ++
Sbjct: 321 GCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTP 380
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
IW +LL AC+ H + + +A+++L + P++A YV+LSNI+A+A W+ V + R+ M
Sbjct: 381 SIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWKDVFKVRKLM 440
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
E+ V KEPG SW+ + +H F ++ HP +I+ ++E+ ++K G+VPD +
Sbjct: 441 LEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIKAAGFVPDLSCVL 500
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVMLP------------FKYISEIKNRE 407
HD+D E+KE L HSEKLAI F GL + + K++S++ RE
Sbjct: 501 HDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIRVMKNLRICVDCHNFAKFVSKVYERE 560
Query: 408 IIVRDASRFHHFRNGKCSCGDYW 430
I +RD +RFH +G C+CGDYW
Sbjct: 561 ISLRDKNRFHLLTHGNCTCGDYW 583
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 132/250 (52%), Gaps = 10/250 (4%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G+ L MY++ G+L + V+ MP R+V++W T+I+G +Q + LD + M G
Sbjct: 48 GTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGC 107
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
P++ T +V++SCS ++ QG+Q+H+ +VK + V SSL+ MY++ + ++ +
Sbjct: 108 IPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARR 167
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F DVV +++I+ Y G EEA++LF Q+ + + N VTF +L+ A S
Sbjct: 168 VFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLAS 227
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTC----VVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
+ G + L+++K L + ++D+ +CG L + + NM ++ + + W
Sbjct: 228 LDYGKQVHALILRK-----ELPFFVALQNSLIDMYSKCGKLLYSRRVFDNM-LERSVVSW 281
Query: 245 KTLLSACKTH 254
+L H
Sbjct: 282 NAMLMGYGRH 291
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 86/173 (49%), Gaps = 5/173 (2%)
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
+ + I++C E L +G+Q+HA ++ A V + + L++MY RCG LDD+
Sbjct: 13 YEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP 72
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGME 194
VV W++MI+ Y + EA++LF +M + N+ T ++L +CS +G +
Sbjct: 73 ERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQ 132
Query: 195 FFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP----VKANAII 243
L+VK + + + ++D+ + + EA + +P V AII
Sbjct: 133 VHSLLVKT-NFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAII 184
>gi|356513527|ref|XP_003525465.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Glycine max]
Length = 579
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 162/420 (38%), Positives = 255/420 (60%), Gaps = 16/420 (3%)
Query: 27 KVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR--PDKITFVSVISSCSE 84
KV MP R+ +AW +I+ +N D L +++M+ ++ PD +T + ++ +C+
Sbjct: 160 KVFDEMPHRDTVAWNVMISCCIRNNRTRDALSLFDVMQGSSYKCEPDDVTCLLLLQACAH 219
Query: 85 LATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSM 144
L L G++IH +++ G + + +SLISMYSRCGCLD + + F +VV WS+M
Sbjct: 220 LNALEFGERIHGYIMERGYRDALNLCNSLISMYSRCGCLDKAYEVFKGMGNKNVVSWSAM 279
Query: 145 IAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYR 204
I+ +G G EAI FE+M + +D TF +L ACS+ G+ ++GM FF M +++
Sbjct: 280 ISGLAMNGYGREAIEAFEEMLRIGVLPDDQTFTGVLSACSYSGMVDEGMSFFHRMSREFG 339
Query: 205 RKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIA 264
P + HY C+VDLLGR G LD+A LI +M VK ++ +W+TLL AC+ H + R+
Sbjct: 340 VTPNVHHYGCMVDLLGRAGLLDKAYQLIMSMVVKPDSTMWRTLLGACRIHGHVTLGERVI 399
Query: 265 EEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQF 324
++ + Q+A YVLL NI++SA W+ V+E R+ M+ ++++ PG S +E+K VH+F
Sbjct: 400 GHLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRKLMKNKSIQTTPGCSTIELKGAVHEF 459
Query: 325 TMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAF 384
+ D SH R+ EI L+E+ ++++ GYV + +++H MD +EK Y L HHSEKLA+AF
Sbjct: 460 VVDDVSHSRNREIYETLDEINHQLRIAGYVVELSSELHKMDDKEKGYVLSHHSEKLAVAF 519
Query: 385 -------------AEHTRGLIVMLPF-KYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
A + R + F K S + NR++++RD +RFHHFR G+CSC DYW
Sbjct: 520 GVLATPPGTILRVASNLRVCVDCHNFLKLFSGVYNRDVVLRDHNRFHHFRGGRCSCSDYW 579
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 123/269 (45%), Gaps = 6/269 (2%)
Query: 42 TLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA 101
T+I + + + L Y MR G D ++ + SC L G Q+H + K
Sbjct: 74 TMIRACSMSDSPQKGLLLYRDMRRRGIAADPLSSSFAVKSCIRFLYLPGGVQVHCNIFKD 133
Query: 102 GASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLF 161
G D ++++++ +YS C D+ K F E + D V W+ MI+ + + +A++LF
Sbjct: 134 GHQWDTLLLTAVMDLYSLCQRGGDACKVFDEMPHRDTVAWNVMISCCIRNNRTRDALSLF 193
Query: 162 EQMEQKEF--EANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLL 219
+ M+ + E +DVT + LL AC+H E G ++++ R L ++ +
Sbjct: 194 DVMQGSSYKCEPDDVTCLLLLQACAHLNALEFGERIHGYIMERGYRDA-LNLCNSLISMY 252
Query: 220 GRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAP 277
RCG LD+A + + M K N + W ++S + A EE+L GV P D
Sbjct: 253 SRCGCLDKAYEVFKGMGNK-NVVSWSAMISGLAMNGYGREAIEAFEEMLRIGVLPDDQTF 311
Query: 278 YVLLSNIHASAKRWQGVSEFREAMRERNV 306
+LS S +G+S F RE V
Sbjct: 312 TGVLSACSYSGMVDEGMSFFHRMSREFGV 340
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 95/207 (45%), Gaps = 9/207 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ L +SL MY + G L + +V + M +NV++W +I+G A NG + ++ +
Sbjct: 237 GYRDALNLCNSLISMYSRCGCLDKAYEVFKGMGNKNVVSWSAMISGLAMNGYGREAIEAF 296
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQ-IHAEVVKAGASLDVGVISSLISMYSR 119
M +G PD TF V+S+CS + +G H + G + +V ++ + R
Sbjct: 297 EEMLRIGVLPDDQTFTGVLSACSYSGMVDEGMSFFHRMSREFGVTPNVHHYGCMVDLLGR 356
Query: 120 CGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGK---GEEAINLFEQMEQKEFEANDVT 175
G LD + + + D +W +++ A HG GE I +E K EA D
Sbjct: 357 AGLLDKAYQLIMSMVVKPDSTMWRTLLGACRIHGHVTLGERVIG--HLIELKAQEAGD-- 412
Query: 176 FVSLLYACSHCGLKEKGMEFFDLMVKK 202
+V LL S G EK E LM K
Sbjct: 413 YVLLLNIYSSAGHWEKVAEVRKLMKNK 439
>gi|15223594|ref|NP_176062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173061|sp|Q9FXB9.1|PPR84_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g56690, mitochondrial; Flags: Precursor
gi|9954744|gb|AAG09095.1|AC009323_6 Hypothetical protein [Arabidopsis thaliana]
gi|332195302|gb|AEE33423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 168/440 (38%), Positives = 257/440 (58%), Gaps = 15/440 (3%)
Query: 6 LVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRM 65
++A +++ + + G + + +V LM R+ W +I + G + LD + M+
Sbjct: 265 VIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQK 324
Query: 66 VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD 125
G RP + +S++S C+ LA+L G+Q+HA +V+ DV V S L++MY +CG L
Sbjct: 325 QGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVK 384
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
+ F D+++W+S+I+ Y HG GEEA+ +F +M N VT +++L ACS+
Sbjct: 385 AKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSY 444
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
G E+G+E F+ M K+ P +EHY+C VD+LGR G +D+A LI +M +K +A +W
Sbjct: 445 AGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWG 504
Query: 246 TLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERN 305
LL ACKTH D+A A+++ P +A YVLLS+I+AS +W V+ R+ MR N
Sbjct: 505 ALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNN 564
Query: 306 VKKEPGVSWLEIKNQVHQFTMGD-KSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
V K PG SW+E+ +VH FT G K+HP I + LE+ ++ GY PD +HD+
Sbjct: 565 VSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDV 624
Query: 365 DSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNREIIV 410
D EEK +L HSE+LA+A+ + G+ + + K IS++ REII+
Sbjct: 625 DEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIIL 684
Query: 411 RDASRFHHFRNGKCSCGDYW 430
RDA+RFHHF NG+CSC DYW
Sbjct: 685 RDANRFHHFNNGECSCRDYW 704
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 118/249 (47%), Gaps = 20/249 (8%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E ++V+ + L Y+K+ +VE V LMP RNV++W ++ G Q G+ + +
Sbjct: 76 ERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWR 135
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEV-VKAGASLDVGVISSLISMYSRCG 121
M +++++ + + + + ++++ + VK DV +++I R G
Sbjct: 136 MP----ERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVK-----DVVASTNMIGGLCREG 186
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+D++ F E +VV W++MI Y + + + A LFE M +K +V++ S+L
Sbjct: 187 RVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEK----TEVSWTSMLL 242
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
+ G E EFF++M KP + +V G G + +A + M + NA
Sbjct: 243 GYTLSGRIEDAEEFFEVMPM----KPVIACNAMIVG-FGEVGEISKARRVFDLMEDRDNA 297
Query: 242 IIWKTLLSA 250
W+ ++ A
Sbjct: 298 -TWRGMIKA 305
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 86/171 (50%), Gaps = 6/171 (3%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F+ D+ S L MY+K G LV+ + V +++I W ++I+G A +GL E+ L ++
Sbjct: 362 FDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFH 421
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEV-VKAGASLDVGVISSLISMYSRC 120
M G P+K+T ++++++CS L +G +I + K + V S + M R
Sbjct: 422 EMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRA 481
Query: 121 GCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFE 170
G +D +++ D +W +++ A H + ++L E +K FE
Sbjct: 482 GQVDKAMELIESMTIKPDATVWGALLGACKTHSR----LDLAEVAAKKLFE 528
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 73/155 (47%), Gaps = 10/155 (6%)
Query: 111 SSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFE 170
+ L+S Y + + ++ F +VV W++M+ Y G EA +LF +M ++
Sbjct: 83 NGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPER--- 139
Query: 171 ANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAA 230
N+V++ + G +K + +D+M K + T ++ L R G +DEA
Sbjct: 140 -NEVSWTVMFGGLIDDGRIDKARKLYDMMPVK-----DVVASTNMIGGLCREGRVDEARL 193
Query: 231 LIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAE 265
+ M + N + W T+++ + + D+A ++ E
Sbjct: 194 IFDEMRER-NVVTWTTMITGYRQNNRVDVARKLFE 227
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 90/204 (44%), Gaps = 24/204 (11%)
Query: 114 ISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEAND 173
IS SR G ++++ K F ++ + W+S+++ Y +G +EA LF++M ++ N
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSER----NV 79
Query: 174 VTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIR 233
V++ L+ + + F+LM ++ + +T +V + G + EA +L
Sbjct: 80 VSWNGLVSGYIKNRMIVEARNVFELMPER-----NVVSWTAMVKGYMQEGMVGEAESLFW 134
Query: 234 NMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQG 293
MP + N + W + D A ++ + + V +N+ R
Sbjct: 135 RMPER-NEVSWTVMFGGLIDDGRIDKARKLYDMM------PVKDVVASTNMIGGLCREGR 187
Query: 294 VSEFR---EAMRERNVKKEPGVSW 314
V E R + MRERNV V+W
Sbjct: 188 VDEARLIFDEMRERNV-----VTW 206
>gi|224104375|ref|XP_002313416.1| predicted protein [Populus trichocarpa]
gi|222849824|gb|EEE87371.1| predicted protein [Populus trichocarpa]
Length = 650
Score = 325 bits (833), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 167/437 (38%), Positives = 269/437 (61%), Gaps = 16/437 (3%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN--LMRMVG 67
++L MY K G + V MP++NV++W +IA A+NG A + L+ + ++
Sbjct: 214 TTLVDMYAKFGCVSNASCVFNQMPVKNVVSWSAMIACYAKNGKAFEALELFRELMLETQD 273
Query: 68 FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV 127
P+ +T VSV+ +C+ LA L QG+ IH +++ G + VIS+L++MY+RCG L+
Sbjct: 274 LCPNSVTMVSVLQACAALAALEQGRLIHGYILRKGLDSILPVISALVTMYARCGKLELGQ 333
Query: 128 KTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCG 187
+ F + + DVV W+S+I++YG HG G++AI +FE+M E + ++FVS+L ACSH G
Sbjct: 334 RVFDQMDKRDVVSWNSLISSYGVHGFGKKAIGIFEEMTYNGVEPSPISFVSVLGACSHAG 393
Query: 188 LKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTL 247
L ++G F+ M + P +EHY C+VDLLGR L+EAA +I NM ++ +W +L
Sbjct: 394 LVDEGKMLFNSMHVAHGICPSVEHYACMVDLLGRANRLEEAAKIIENMRIEPGPKVWGSL 453
Query: 248 LSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVK 307
L +C+ H + ++A R + + + P +A YVLL++I+A A W GV ++ + R ++
Sbjct: 454 LGSCRIHCNVELAERASIRLFDLEPTNAGNYVLLADIYAEAGMWDGVKRVKKLLEARGLQ 513
Query: 308 KEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSE 367
K PG SW+E+K +++ F D+ +PR ++ L +L+ E+K GYVP T ++D+ +
Sbjct: 514 KVPGRSWIEVKRKIYSFVSVDEVNPRMEQLHALLVKLSMELKEEGYVPQTKVVLYDLKAA 573
Query: 368 EKEYNLKHHSEKLAIAFA--EHTRGLIVMLP------------FKYISEIKNREIIVRDA 413
EKE + HSEKLA+AF ++G ++ + K+IS+ N+EI+VRD
Sbjct: 574 EKERIVLGHSEKLAVAFGLINSSKGEVIRITKSLRLCEDCHSFTKFISKFANKEILVRDV 633
Query: 414 SRFHHFRNGKCSCGDYW 430
+RFHHFR+G CSCGDYW
Sbjct: 634 NRFHHFRDGVCSCGDYW 650
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 140/280 (50%), Gaps = 10/280 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ D + L +MY S+ KV R + + L + G E+VL+ Y
Sbjct: 100 GFDQDPFLATKLINMYSFFDSIDNARKVFDKTRNRTIYVYNALFRALSLAGHGEEVLNMY 159
Query: 61 NLMRMVGFRPDKITFVSVISSC--SE--LATLGQGQQIHAEVVKAGASLDVGVISSLISM 116
M +G D+ T+ V+ +C SE ++ L +G++IHA +++ G V ++++L+ M
Sbjct: 160 RRMNSIGIPSDRFTYTYVLKACVASECFVSLLNKGREIHAHILRHGYDGYVHIMTTLVDM 219
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQ--MEQKEFEANDV 174
Y++ GC+ ++ F + +VV WS+MIA Y +GK EA+ LF + +E ++ N V
Sbjct: 220 YAKFGCVSNASCVFNQMPVKNVVSWSAMIACYAKNGKAFEALELFRELMLETQDLCPNSV 279
Query: 175 TFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRN 234
T VS+L AC+ E+G +++K L + +V + RCG L+ +
Sbjct: 280 TMVSVLQACAALAALEQGRLIHGYILRK-GLDSILPVISALVTMYARCGKLELGQRVFDQ 338
Query: 235 MPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNP 272
M K + + W +L+S+ H A I EE+ GV P
Sbjct: 339 MD-KRDVVSWNSLISSYGVHGFGKKAIGIFEEMTYNGVEP 377
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 111/238 (46%), Gaps = 12/238 (5%)
Query: 49 QNGLAEDVLDQYNLMRMVGF-----RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGA 103
N L + + Q NL + + P + T+ +I SC+ +L Q++H +++ G
Sbjct: 42 NNKLIQSLCKQGNLTQALELLSLEPNPAQHTYELLILSCTHQNSLLDAQRVHRHLLENGF 101
Query: 104 SLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQ 163
D + + LI+MYS +D++ K F + + +++++ A G GEE +N++ +
Sbjct: 102 DQDPFLATKLINMYSFFDSIDNARKVFDKTRNRTIYVYNALFRALSLAGHGEEVLNMYRR 161
Query: 164 MEQKEFEANDVTFVSLLYAC--SHC--GLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLL 219
M ++ T+ +L AC S C L KG E ++ ++ + T +VD+
Sbjct: 162 MNSIGIPSDRFTYTYVLKACVASECFVSLLNKGREIHAHIL-RHGYDGYVHIMTTLVDMY 220
Query: 220 GRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAP 277
+ G + A+ + MPVK N + W +++ + A + E++ + QD P
Sbjct: 221 AKFGCVSNASCVFNQMPVK-NVVSWSAMIACYAKNGKAFEALELFRELM-LETQDLCP 276
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 78/169 (46%), Gaps = 8/169 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + L S+L MY + G L G++V M R+V++W +LI+ +G + + +
Sbjct: 308 GLDSILPVISALVTMYARCGKLELGQRVFDQMDKRDVVSWNSLISSYGVHGFGKKAIGIF 367
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEV-VKAGASLDVGVISSLISMYSR 119
M G P I+FVSV+ +CS + +G+ + + V G V + ++ + R
Sbjct: 368 EEMTYNGVEPSPISFVSVLGACSHAGLVDEGKMLFNSMHVAHGICPSVEHYACMVDLLGR 427
Query: 120 CGCLDDSVKTF--LECEYSDVVLWSSMIAAYGFHGKGEEA----INLFE 162
L+++ K + E V W S++ + H E A I LF+
Sbjct: 428 ANRLEEAAKIIENMRIEPGPKV-WGSLLGSCRIHCNVELAERASIRLFD 475
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 172/481 (35%), Positives = 275/481 (57%), Gaps = 51/481 (10%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAED----- 55
G + ++ ++L +MY K GSL E KV M R+ +AW TLI A NG +D
Sbjct: 338 GLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKAR 397
Query: 56 -VLDQ--------YNLM---------------------RMVGFRPDKITFVSVISSCSEL 85
V D+ +N M G +PD +TF++V+ +C+ L
Sbjct: 398 KVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASL 457
Query: 86 ATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMI 145
L + + +HA++ ++ +V V ++LI+MY+RCG L+++ + F + VV W++M+
Sbjct: 458 GRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMV 517
Query: 146 AAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRR 205
AA+ +G+ EA++LF++M+ + + +DVT+ S+L+ C+H G E+G +F M + +
Sbjct: 518 AAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHAL 577
Query: 206 KPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAE 265
P +H+ +VDLLGR G L +A L+ +MP + + + W T L+AC+ H ++ AE
Sbjct: 578 APTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAE 637
Query: 266 EILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFT 325
+ ++P APY+ +SNI+A+ W+ V+ R+ M ER +KK PG+S++E+ ++H+F+
Sbjct: 638 RVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFS 697
Query: 326 MGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFA 385
G K HPR+ EI L L M+ GYVPDT A +HD+ EKE L +HSEK+AIAF
Sbjct: 698 SGGKYHPRTDEICEELTRLHGLMRAAGYVPDTKAVLHDVSEGEKETMLLYHSEKMAIAFG 757
Query: 386 -EHTRG------LIVML--------PFKYISEIKNREIIVRDASRFHHF-RNGKCSCGDY 429
+RG ++ L K+I+ I R+IIVRD +RFH F +GKCSCGDY
Sbjct: 758 LVSSRGSGEPIRVVKNLRVCSDCHTATKFIARIAGRDIIVRDCNRFHRFSSDGKCSCGDY 817
Query: 430 W 430
W
Sbjct: 818 W 818
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 136/255 (53%), Gaps = 10/255 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ DLV ++L +MY K GS E +V M R++++W +I NG + L+ Y
Sbjct: 237 GFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELY 296
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M GF+ K TFVS++ +CS + L QG+ +H+ +++ G +V V ++L++MY++C
Sbjct: 297 QKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKC 356
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEE---AINLFEQMEQKEFEANDVTFV 177
G L+++ K F + D V WS++I AY +G G++ A +F+++ ++ +++
Sbjct: 357 GSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRD----TISWN 412
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAAL---IRN 234
+++ G M+ F M KP + V++ G L E AL I
Sbjct: 413 AMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISE 472
Query: 235 MPVKANAIIWKTLLS 249
+++N ++ TL++
Sbjct: 473 SELESNVVVTNTLIN 487
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 132/242 (54%), Gaps = 3/242 (1%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
++L MY + GS+ + +++ + + R+ +W +I +Q+G L + M+
Sbjct: 145 ANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMK-CDV 203
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
+P+ T+++VIS S L +G++IHAE+V G D+ V ++LI+MY +CG ++ +
Sbjct: 204 KPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVATALINMYGKCGSSHEARE 263
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F + + D+V W+ MI Y +G EA+ L+++++ + F+ TFVS+L ACS
Sbjct: 264 VFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKA 323
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
+G ++++ + T +V++ +CG L+EA + M + +A+ W TL+
Sbjct: 324 LAQGRLVHSHILER-GLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNR-DAVAWSTLI 381
Query: 249 SA 250
A
Sbjct: 382 GA 383
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 129/249 (51%), Gaps = 8/249 (3%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIR--NVIAWITLIAGKAQNGLAEDVLDQ 59
FE D + G++L MY K SLV+ V M R NV++W +IA AQNG + + L
Sbjct: 38 FERDTMVGNALISMYGKCDSLVDARSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVL 97
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
Y M + G D +TFVSV+ +CS LA QG++IH V +G + ++L++MY+R
Sbjct: 98 YWRMNLQGLGTDHVTFVSVLGACSSLA---QGREIHNRVFYSGLDSFQSLANALVTMYAR 154
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G + D+ + F + D W+++I A+ G A+ +F++M + + + N T++++
Sbjct: 155 FGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEM-KCDVKPNSTTYINV 213
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
+ S + +G + +V L T ++++ G+CG EA + M K
Sbjct: 214 ISGFSTPEVLPEGRKIHAEIVAN-GFDTDLVVATALINMYGKCGSSHEAREVFDKMK-KR 271
Query: 240 NAIIWKTLL 248
+ + W ++
Sbjct: 272 DMVSWNVMI 280
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 70/118 (59%), Gaps = 2/118 (1%)
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
+PD +TF++V+ SCS + +G+ +H + + D V ++LISMY +C L D+
Sbjct: 4 QPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63
Query: 129 TF--LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
F ++ +VV W++MIAAY +G EA+ L+ +M + + VTFVS+L ACS
Sbjct: 64 VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACS 121
>gi|413943701|gb|AFW76350.1| hypothetical protein ZEAMMB73_198527 [Zea mays]
Length = 515
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 171/443 (38%), Positives = 257/443 (58%), Gaps = 23/443 (5%)
Query: 6 LVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRM 65
VA ++L +Y+K G + + V M R+ +AW ++ G A NG + LD + M+M
Sbjct: 78 FVATAAL-DLYVKCGEMEKARSVFDEMKNRDAVAWGAMVGGYASNGHPREALDLFFAMQM 136
Query: 66 VGFRPDKITFVSVISSCSELATLGQGQQ----IHAEVVKAGASLDVGVISSLISMYSRCG 121
G +PD T V +S+C+ L L G+Q +H + V L ++LI MY++CG
Sbjct: 137 EGAKPDCYTVVGALSACTRLGALDLGRQAVGMVHWDEVLGNPVLG----TALIDMYAKCG 192
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
++ F + D+++W++MI G G + A L QM++ + ND TF+ LL
Sbjct: 193 STSEAWMVFQQMLERDIIVWNAMILGLGMTGHEKIAFALVGQMKKSGVKLNDNTFIGLLC 252
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
+C+H GL G ++F M YR PR+EHY C+VDL R G L+EA LI +MP+ ANA
Sbjct: 253 SCTHTGLVNDGRQYFHNMTHVYRISPRIEHYGCMVDLFSRAGLLEEAHQLIGDMPMLANA 312
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
++W LL CK H++ D+A ++++ + P ++ YV+LSNI++++ RW+ ++ R M
Sbjct: 313 VVWGALLGGCKIHRNADLAEHALKQLIRLEPWNSGNYVMLSNIYSNSGRWEDAAKLRLEM 372
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
+ + ++K P SW+E+ +VH+F +GD SHP S +I L+EL EMK GY P T M
Sbjct: 373 KAKGIEKVPASSWVELDGKVHKFYVGDDSHPLSDKIYAKLDELGMEMKAMGYEPTTEVVM 432
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFA----------EHTRGLIVML----PFKYISEIKNRE 407
D+++EEKE L HHSEK+AIAF+ T+ L V K IS I RE
Sbjct: 433 FDVENEEKENTLVHHSEKIAIAFSLITTEPGETIRVTKNLRVCTDCHSAIKLISRITCRE 492
Query: 408 IIVRDASRFHHFRNGKCSCGDYW 430
I+VRD +RFH FR+G CSC DYW
Sbjct: 493 IVVRDNNRFHCFRDGHCSCNDYW 515
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 107/219 (48%), Gaps = 5/219 (2%)
Query: 32 MPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQG 91
MP + ++W LIA G A + + G RPD T V V+++C+ +A L G
Sbjct: 1 MPHPSTVSWTALIAAYMDAGHALEAIGVARRAFASGMRPDSFTAVRVLTACARVADLETG 60
Query: 92 QQIHAEVVKA-GASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGF 150
+ + A + G + V V ++ + +Y +CG ++ + F E + D V W +M+ Y
Sbjct: 61 EAVWAAARQEEGVAESVFVATAALDLYVKCGEMEKARSVFDEMKNRDAVAWGAMVGGYAS 120
Query: 151 HGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLM-VKKYRRKPRL 209
+G EA++LF M+ + + + T V L AC+ G + G + ++ + P L
Sbjct: 121 NGHPREALDLFFAMQMEGAKPDCYTVVGALSACTRLGALDLGRQAVGMVHWDEVLGNPVL 180
Query: 210 EHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
T ++D+ +CG EA + + M ++ + I+W ++
Sbjct: 181 G--TALIDMYAKCGSTSEAWMVFQQM-LERDIIVWNAMI 216
>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
[Solanum demissum]
Length = 819
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 160/437 (36%), Positives = 257/437 (58%), Gaps = 15/437 (3%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G++L MY K + ++ + RN + W +I+ Q G E+ L + M
Sbjct: 383 GNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENV 442
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
D+ TF S + + + LA++ G+Q+H+ V++ G V S L+ MY+ CG + D+++
Sbjct: 443 HGDQATFASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIE 502
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F E ++V W+++I+AY +G E + F M + + V+F+S+L ACSH GL
Sbjct: 503 VFKEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHRGL 562
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
EK + +F+ M + Y+ PR +HY ++D+L R G +EA LI MP + + ++W ++L
Sbjct: 563 VEKALWYFNSMTQVYKLDPRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDEVMWSSVL 622
Query: 249 SACKTHKSTDMAGRIAEEILGVNP-QDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVK 307
++C+ HK+ D+A + A+++ ++ +DAA YV +SNI+A A +W+ ++ ++AMRER VK
Sbjct: 623 NSCRIHKNQDLAKKAADQLFKMDALRDAAAYVNMSNIYAEAGKWENAAKVKKAMRERGVK 682
Query: 308 KEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSE 367
K SW+EI ++VH FT D++HP++ +I + L M GY PDT + ++D E
Sbjct: 683 KVTAYSWVEIDHRVHVFTANDRTHPQTEQIRRKINSLVELMDKEGYKPDTSCTLQNVDEE 742
Query: 368 EKEYNLKHHSEKLAIAFA----EHTRGLIVM----------LPFKYISEIKNREIIVRDA 413
K +LK+HSE+LAIAFA +I+M K IS+I REI VRD+
Sbjct: 743 MKIESLKYHSERLAIAFALINTPEGSPIIIMKNLRACVDCHAAIKVISKIVGREITVRDS 802
Query: 414 SRFHHFRNGKCSCGDYW 430
SRFHHFR+G CSCGDYW
Sbjct: 803 SRFHHFRDGSCSCGDYW 819
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 113/242 (46%), Gaps = 25/242 (10%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y+KS +L ++ M RN ++W +I G +QN ++ + Y M G +PD ITF
Sbjct: 87 YVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPDHITF 146
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
+++S + TL + QIH+ +++ G S + V +SL+ Y + CLD + + F E
Sbjct: 147 ATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSEMPT 206
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL----------YACSH 185
D V ++ MI Y +G EEA+ LF QM +F+ + TF ++L +
Sbjct: 207 KDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQI 266
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP----VKANA 241
GL K +D+ V ++D + Y+D A L MP V N
Sbjct: 267 HGLAIKTSYVWDIFVA-----------NALLDFYSKHDYIDLAKNLFDEMPELDGVSYNI 315
Query: 242 II 243
II
Sbjct: 316 II 317
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 117/246 (47%), Gaps = 2/246 (0%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ ++L Y K + + + MP + +++ +I G A NG E D + ++
Sbjct: 278 DIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRLQ 337
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
F F +++S + L G+Q HA+ V A +V V ++L+ MY++C +
Sbjct: 338 GTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEKFE 397
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D+ + F Y + V W+++I+ Y G EEA+ +F++M ++ + TF S L A +
Sbjct: 398 DANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASA 457
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
+ G + +++ + +VD+ CG + +A + + MP + N + W
Sbjct: 458 NLASVSLGKQLHSSVIRLGLLSSVFSG-SVLVDMYANCGSMKDAIEVFKEMPDR-NIVCW 515
Query: 245 KTLLSA 250
L+SA
Sbjct: 516 NALISA 521
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 118/254 (46%), Gaps = 12/254 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF L+ +SL Y K+ L ++ MP ++ +++ +I G + G E+ L +
Sbjct: 173 GFSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNVMITGYTKYGFREEALKLF 232
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
MR + F+P TF +++ + GQQIH +K D+ V ++L+ YS+
Sbjct: 233 MQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKH 292
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
+D + F E D V ++ +I Y ++G+ E++ +LF++++ F+ + F ++L
Sbjct: 293 DYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATML 352
Query: 181 YACS-----HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM 235
+ G + V + ++ +VD+ +C ++A + N+
Sbjct: 353 SVAAIELNLSMGRQTHAQAVVTTAVSE------VQVGNALVDMYAKCEKFEDANRIFANL 406
Query: 236 PVKANAIIWKTLLS 249
+ N++ W ++S
Sbjct: 407 AYR-NSVPWTAIIS 419
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/316 (20%), Positives = 135/316 (42%), Gaps = 43/316 (13%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + +GS L MY GS+ + +V + MP RN++ W LI+ +QNG AE +
Sbjct: 476 GLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIVCWNALISAYSQNGDAEATFSSF 535
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV--ISSLISMYS 118
M G PD ++F+SV+++CS + + + + LD +++I +
Sbjct: 536 ADMIESGLYPDSVSFLSVLTACSHRGLVEKALWYFNSMTQV-YKLDPRRKHYATMIDVLC 594
Query: 119 RCGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
R G +++ E + D V+WSS++ + H + A +Q+ + + + +V
Sbjct: 595 RSGRFNEAENLISEMPFEPDEVMWSSVLNSCRIHKNQDLAKKAADQLFKMDALRDAAAYV 654
Query: 178 SLLYACSHCG-----------LKEKGMEFFD------------LMVKKYRRKPRLEH--- 211
++ + G ++E+G++ + R P+ E
Sbjct: 655 NMSNIYAEAGKWENAAKVKKAMRERGVKKVTAYSWVEIDHRVHVFTANDRTHPQTEQIRR 714
Query: 212 -YTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGV 270
+V+L+ + GY + + ++N+ + + + K H + R+A +
Sbjct: 715 KINSLVELMDKEGYKPDTSCTLQNVDEEMK-------IESLKYH-----SERLAIAFALI 762
Query: 271 NPQDAAPYVLLSNIHA 286
N + +P +++ N+ A
Sbjct: 763 NTPEGSPIIIMKNLRA 778
Score = 41.2 bits (95), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 88/206 (42%), Gaps = 7/206 (3%)
Query: 35 RNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV--GFRPDKITFVSVISSCSELATLGQGQ 92
+N I + + + G +E ++D R+V GF P+ F + + + +
Sbjct: 7 KNPWGVIRIFSKRFYCGFSERIVDIPVDARIVKTGFDPEISRFNFKLKDLVRANQIAKAR 66
Query: 93 QIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHG 152
Q+ E+ S ++ ++S Y + L + + F + V W+ MI Y +
Sbjct: 67 QLFDEMPYRNTS----SVNMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNN 122
Query: 153 KGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY 212
+ +EA NL+ +M + + + +TF +LL ++ ++ ++ ++ L +
Sbjct: 123 QPKEAFNLYTEMCRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHII-RFGFSASLIVF 181
Query: 213 TCVVDLLGRCGYLDEAAALIRNMPVK 238
+VD + LD A+ L MP K
Sbjct: 182 NSLVDSYCKTCCLDIASQLFSEMPTK 207
>gi|115486527|ref|NP_001068407.1| Os11g0661000 [Oryza sativa Japonica Group]
gi|108864631|gb|ABG22570.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113645629|dbj|BAF28770.1| Os11g0661000 [Oryza sativa Japonica Group]
gi|215694601|dbj|BAG89792.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215701272|dbj|BAG92696.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 610
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 171/444 (38%), Positives = 259/444 (58%), Gaps = 25/444 (5%)
Query: 7 VAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV 66
V ++L Y +G E ++ R MP RN+ AW LI+G G + ++ + MR
Sbjct: 172 VVWTALVSGYASNGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGAVELFVEMRRD 231
Query: 67 GFRPDKITFVS-VISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD 125
G R D +S VI ++LA G+Q+H ++ G ++ V ++LI MYS+C +
Sbjct: 232 GVRIDDAFVLSIVIGGSADLAAFVLGRQLHGSTMRLGFLSNMIVGNALIDMYSKCSDILS 291
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
+ + F + DV+ W++M+ HG+ EEA+ L+++M + N+VTFV L+YACSH
Sbjct: 292 AREVFEGITFRDVISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPNEVTFVGLIYACSH 351
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
GL +KG + F+ M +Y PRL+HYTC +DLL R G+L EA L+ MP + + W
Sbjct: 352 AGLVQKGRQLFESMKNEYGITPRLQHYTCYLDLLSRSGHLLEAEELMTTMPYEPDEATWG 411
Query: 246 TLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERN 305
LLSAC +K +M RI++++L + P+D++ Y+LLSN++A +W V++ R+ M
Sbjct: 412 ALLSACTKYKDAEMCIRISDKLLELRPKDSSTYILLSNVYAVNGKWDSVAKVRKCMIGLE 471
Query: 306 VKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMD 365
++KEPG SW+E + F G+ EI ++LEE+ EM+ RGYVPDT + MHD++
Sbjct: 472 IRKEPGYSWIEAGREFRLFHAGEVPLDVREEIMVFLEEMVLEMRKRGYVPDTSSVMHDLE 531
Query: 366 SEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNR 406
EKE++L HSE+LA+AF GLI P K ISEI +R
Sbjct: 532 ESEKEHHLFLHSERLAVAF-----GLIKSPPGSVIRVVKNLRVCVDCHTVMKLISEITHR 586
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
+I+VRD+SRFHHF GKCSC ++W
Sbjct: 587 KIVVRDSSRFHHFEGGKCSCSEFW 610
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 99/185 (53%), Gaps = 3/185 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF +++ G++L MY K ++ +V + R+VI+W T++ G+AQ+G AE+ L Y
Sbjct: 268 GFLSNMIVGNALIDMYSKCSDILSAREVFEGITFRDVISWTTMVVGEAQHGRAEEALALY 327
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSR 119
+ M + G +P+++TFV +I +CS + +G+Q+ + G + + + + + SR
Sbjct: 328 DRMVLAGAKPNEVTFVGLIYACSHAGLVQKGRQLFESMKNEYGITPRLQHYTCYLDLLSR 387
Query: 120 CGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQ-MEQKEFEANDVTFV 177
G L ++ + Y D W ++++A + E I + ++ +E + +++ +
Sbjct: 388 SGHLLEAEELMTTMPYEPDEATWGALLSACTKYKDAEMCIRISDKLLELRPKDSSTYILL 447
Query: 178 SLLYA 182
S +YA
Sbjct: 448 SNVYA 452
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 5/188 (2%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV-GF 68
++L Y KS L + + P R++ + +L+ + + E L M
Sbjct: 42 AALVSAYAKSRLLPDALHLFDETPRRDIYIYSSLLTAVSHSASPELALPILRCMLSADAL 101
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
PD SV S + L + G+Q+HA V + + D V SSL+ MY +CG DD K
Sbjct: 102 HPDHFVISSVASVFARLRSRRLGRQLHAHFVVSPYNGDDVVKSSLVDMYCKCGSPDDGRK 161
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F + V+W+++++ Y +G+ EEA+ LF M + N + +L+ + G
Sbjct: 162 VFDSMSAKNSVVWTALVSGYASNGRSEEALQLFRSMPGR----NLFAWTALISGLVNTGE 217
Query: 189 KEKGMEFF 196
+E F
Sbjct: 218 SVGAVELF 225
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 81/180 (45%), Gaps = 5/180 (2%)
Query: 94 IHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGK 153
+HA ++K G + ++L+S Y++ L D++ F E D+ ++SS++ A
Sbjct: 25 MHARILKEGLAHHPPNPAALVSAYAKSRLLPDALHLFDETPRRDIYIYSSLLTAVSHSAS 84
Query: 154 GEEAINLFEQMEQKE-FEANDVTFVSLLYACSHCGLKEKGMEFF-DLMVKKYRRKPRLEH 211
E A+ + M + + S+ + + G + +V Y ++
Sbjct: 85 PELALPILRCMLSADALHPDHFVISSVASVFARLRSRRLGRQLHAHFVVSPYNGDDVVK- 143
Query: 212 YTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVN 271
+ +VD+ +CG D+ + +M K N+++W L+S ++ ++ A ++ + G N
Sbjct: 144 -SSLVDMYCKCGSPDDGRKVFDSMSAK-NSVVWTALVSGYASNGRSEEALQLFRSMPGRN 201
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 169/446 (37%), Positives = 260/446 (58%), Gaps = 24/446 (5%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
LD ++ +S+ Y+K G + + + MP ++ ++W +I+G AQ + L + M
Sbjct: 353 LDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEM 412
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
++ G +PD+ VSVIS+C+ LA L QG+ IHA + K G +++ + ++LI+MY + GC+
Sbjct: 413 QIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCV 472
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
+D+++ F E V W+++I +G ++++ F +M++ N++TFV++L AC
Sbjct: 473 EDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGAC 532
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
H GL ++G F+ M+++++ P ++HY C+VDLLGR G L EA LI +MP+ +
Sbjct: 533 RHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVST 592
Query: 244 WKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
W LL ACK + + RI +++ ++P VLLSNI+AS W V E R MR+
Sbjct: 593 WGALLGACKKYGDNETGERIGRKLVELHPDHDGFNVLLSNIYASKGNWVDVLEVRGMMRQ 652
Query: 304 RNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHD 363
V K PG S +E +VH+F GDK+HP++ I+ L+E+ ++KL GY PDT D
Sbjct: 653 HGVVKTPGCSMIEAHGRVHEFLAGDKTHPQNEHIEHMLDEMAKKLKLEGYAPDTREVSLD 712
Query: 364 MDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIK 404
+D EEKE L HSEKLAIAF GLI + P K IS+
Sbjct: 713 IDEEEKETTLFRHSEKLAIAF-----GLIAIDPPTPIRIVKNLRICNDCHTAAKLISKAF 767
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
NREI+VRD RFHHF+ G CSC DYW
Sbjct: 768 NREIVVRDRHRFHHFKQGSCSCMDYW 793
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 153/337 (45%), Gaps = 35/337 (10%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E +++A +S+ ++ K G++ E K+ M +++++W LI+ QN + E+ L +
Sbjct: 220 ERNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKE 279
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC-- 120
M G D++ +SV+S+CS L + G+ +H VVK G V + ++LI MYS C
Sbjct: 280 MNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEE 339
Query: 121 -----------GCLDD-----SVKTFLEC-------------EYSDVVLWSSMIAAYGFH 151
CLD + +++C D V WS+MI+ Y
Sbjct: 340 VVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQ 399
Query: 152 GKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEH 211
+ E + LF++M+ + + ++ VS++ AC+H ++G ++ ++K K +
Sbjct: 400 DRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQG-KWIHAYIRKNGLKINIIL 458
Query: 212 YTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--G 269
T ++++ + G +++A + + + K + W L+ + D + + E+ G
Sbjct: 459 GTTLINMYMKLGCVEDALEVFKGLEEKGVS-TWNALILGLAMNGLVDKSLKTFSEMKEHG 517
Query: 270 VNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNV 306
V P + +L +G F ++E +
Sbjct: 518 VTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKI 554
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 126/280 (45%), Gaps = 70/280 (25%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ D+ ++L +MY G+L + KV + ++++W +++AG G E+ D Y
Sbjct: 156 GFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYVLVGNVEEAKDVY 215
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M P++ +VI+S +S+I ++ +
Sbjct: 216 DRM------PER----NVIAS-----------------------------NSMIVLFGKK 236
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++++ K F E + D+V WS++I+ Y + EEA+ LF++M ++V +S+L
Sbjct: 237 GNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVL 296
Query: 181 YACS-----------HCGLKEKGMEFF----DLMVKKYRR------KPRLEHYTCVVDLL 219
ACS H + + G+E + + ++ Y +L +C +D +
Sbjct: 297 SACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQI 356
Query: 220 G---------RCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+CG +++A AL +MP K N + W ++S
Sbjct: 357 SWNSMISGYVKCGEIEKARALFDSMPDKDN-VSWSAMISG 395
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 99/213 (46%), Gaps = 12/213 (5%)
Query: 42 TLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA 101
T++ G Q + Y M D T+ + SCS G+ I V+K
Sbjct: 96 TMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQSCSIRLAEFDGKCIQDHVLKV 155
Query: 102 GASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLF 161
G DV + ++LI+MY+ CG L D+ K F D+V W+SM+A Y G EEA +++
Sbjct: 156 GFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYVLVGNVEEAKDVY 215
Query: 162 EQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGR 221
++M ++ A++ S++ G E+ + F+ M +K L ++ ++ +
Sbjct: 216 DRMPERNVIASN----SMIVLFGKKGNVEEACKLFNEMKQK-----DLVSWSALISCYEQ 266
Query: 222 CGYLDEAAALIRNMP---VKANAIIWKTLLSAC 251
+EA L + M + + ++ ++LSAC
Sbjct: 267 NEMYEEALILFKEMNANGIMVDEVVVLSVLSAC 299
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 82/157 (52%), Gaps = 2/157 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +++++ G++L +MYMK G + + +V + + + V W LI G A NGL + L +
Sbjct: 451 GLKINIILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTF 510
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQG-QQIHAEVVKAGASLDVGVISSLISMYSR 119
+ M+ G P++ITFV+V+ +C + + +G + ++ + + ++ ++ + R
Sbjct: 511 SEMKEHGVTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGR 570
Query: 120 CGCLDDSVKTFLECEYS-DVVLWSSMIAAYGFHGKGE 155
G L ++ + + DV W +++ A +G E
Sbjct: 571 AGMLKEAEELIESMPMAPDVSTWGALLGACKKYGDNE 607
>gi|302776474|ref|XP_002971398.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
gi|300160530|gb|EFJ27147.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
Length = 562
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 168/440 (38%), Positives = 254/440 (57%), Gaps = 24/440 (5%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L +MY++ GSL E KV M + +W ++I +N + L+ ++ M + G
Sbjct: 128 NALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALELFHRMNLEGIP 187
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P +T SV+++C+ L G+QIH+ + +G V ++L+ MY++CG L+ S K
Sbjct: 188 PTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSLECSSKV 247
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F E + V W++MIAA HG+G+EA+ LF++M + A+ TF+ +L ACSH GL
Sbjct: 248 FTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLRACSHAGLI 307
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
++ +EFF MV+ Y P HY +D +GR G L +A LI +MP + WKTLL+
Sbjct: 308 KESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHPETLTWKTLLN 367
Query: 250 ACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKE 309
AC+ H + A ++AE + + P+D+ Y LL N++A+ R+ R+ M +R +KK
Sbjct: 368 ACRIHSQAERATKVAELLSKLAPEDSMAYTLLGNVYAATGRYGDQMRVRKGMTDRGLKKV 427
Query: 310 PGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEK 369
PG S++E+KN+VH+F GD++HP EI L LE+L M+ GYVP+T +H ++ EEK
Sbjct: 428 PGKSFIEVKNKVHEFVAGDRAHPSRDEILLELEKLGGRMREAGYVPNTKDVLHAVNEEEK 487
Query: 370 EYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREIIV 410
E + HSEKLAIAF GLI P K I++I R I+V
Sbjct: 488 EQLIGLHSEKLAIAF-----GLIATPPGTPLLIVKNLRVCSDCHAATKVIAKIMRRRIVV 542
Query: 411 RDASRFHHFRNGKCSCGDYW 430
RD RFHHF +G+CSC DYW
Sbjct: 543 RDTHRFHHFEDGQCSCKDYW 562
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 133/270 (49%), Gaps = 5/270 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF +A + L MY K G L E + + R V++W +I A +G ++ L +
Sbjct: 15 GFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGAYALHGRGQEALLLF 74
Query: 61 NLMRMVG-FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVI--SSLISMY 117
+ MR G P+ +TF V ++C + L QG++IHA + +G I ++L++MY
Sbjct: 75 HRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELKSSNAILENALLNMY 134
Query: 118 SRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
RCG L+++ K F ++ D W+SMI A + + EA+ LF +M + VT
Sbjct: 135 VRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALELFHRMNLEGIPPTSVTLA 194
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
S+L AC+ G + G + + L T ++D+ +CG L+ ++ + M
Sbjct: 195 SVLNACACSGALKVGKQIHSRLDASGFHSSVLAQ-TALLDMYAKCGSLECSSKVFTAMET 253
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRIAEEI 267
+ N++ W +++A H D A + +E+
Sbjct: 254 R-NSVSWTAMIAALAQHGQGDEALELFKEM 282
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 86/166 (51%), Gaps = 7/166 (4%)
Query: 90 QGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYG 149
+G++IH+ + G + L+SMY++CGCLD++ F VV WS+MI AY
Sbjct: 3 EGRRIHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGAYA 62
Query: 150 FHGKGEEAINLFEQMEQK-EFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPR 208
HG+G+EA+ LF +M E N +TF + AC E+G E L + K
Sbjct: 63 LHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELKSS 122
Query: 209 ---LEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSAC 251
LE+ ++++ RCG L+EA + M +A W ++++AC
Sbjct: 123 NAILEN--ALLNMYVRCGSLEEARKVFDTMD-HPDAFSWTSMITAC 165
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 4/169 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF ++A ++L MY K GSL KV M RN ++W +IA AQ+G ++ L+ +
Sbjct: 220 GFHSSVLAQTALLDMYAKCGSLECSSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELF 279
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVK--AGASLDVGVISSLISMYS 118
M + G D TF+ V+ +CS + + + +V+ A A + +L ++
Sbjct: 280 KEMNLEGMVADATTFICVLRACSHAGLIKESLEFFHSMVEDYAIAPTETHYCRALDTI-G 338
Query: 119 RCGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQ 166
R G L D+ + + + + W +++ A H + E A + E + +
Sbjct: 339 RAGRLQDAEELIHSMPFHPETLTWKTLLNACRIHSQAERATKVAELLSK 387
>gi|413934850|gb|AFW69401.1| hypothetical protein ZEAMMB73_719952 [Zea mays]
Length = 742
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 168/434 (38%), Positives = 250/434 (57%), Gaps = 24/434 (5%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y K G + + M R+VI + ++I G +G D L + MR G R D T
Sbjct: 314 YCKLGHVDVARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQMRRHGMRADNFTV 373
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
VS++++C+ L L G+ +HA + + DV + ++L+ MY +CG +D++ F
Sbjct: 374 VSLLTACASLGALPHGRALHASIEQRIVEEDVYLGTALLDMYMKCGRVDEATAVFHRMGE 433
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
DV W++MIA F+G G++A+ F QM++ F+ VT++++L ACSH L ++G
Sbjct: 434 RDVHTWTAMIAGLAFNGMGKDALESFCQMKRDGFQPTSVTYIAVLTACSHSSLLDEGRLH 493
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK 255
F+ M ++ P++EHY C++DLL R G LDEA L++ MP++ NA+IW ++LSAC+ HK
Sbjct: 494 FNEMRSLHKLHPQVEHYGCMIDLLARSGLLDEAMHLVQTMPMQPNAVIWGSILSACRVHK 553
Query: 256 STDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWL 315
+ D+A AE +L + P++ A YV L NI+ +++W R M ER VKK G S +
Sbjct: 554 NIDLARHAAEHLLKLAPEEDAVYVQLYNIYIDSRQWADAKRVRMLMEERGVKKTAGYSSI 613
Query: 316 EIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKH 375
+ QVH+F D+SHP ++EI +EE+ +K GY P T D+D EEKE L
Sbjct: 614 TVAGQVHKFVANDQSHPWTLEIMAMMEEIACRLKSVGYSPVTSRIAVDVDEEEKEQALLA 673
Query: 376 HSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREIIVRDASRF 416
HSEK+AIAF GLI + P K +S++ NREIIVRD SRF
Sbjct: 674 HSEKIAIAF-----GLISLPPSLPIHIVKNLRVCEDCHSAIKLVSQLWNREIIVRDRSRF 728
Query: 417 HHFRNGKCSCGDYW 430
HHFR+G CSC D+W
Sbjct: 729 HHFRDGACSCNDFW 742
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 123/265 (46%), Gaps = 37/265 (13%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D V +++ ++ G L E +++ P RNV++W +LIAG ++ G D + +N M
Sbjct: 170 DAVVWATVIGGLVRWGLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCML 229
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG--- 121
G PD++ + +S+CS+L L G+ +H V + + ++ +LI MY++CG
Sbjct: 230 SDGVAPDEVAVIGALSACSKLKNLDLGRLLHLLVGQKRIRMTDNLVVALIDMYAKCGDIA 289
Query: 122 -------------------------C----LDDSVKTFLECEYSDVVLWSSMIAAYGFHG 152
C +D + F + DV+ ++SMI Y G
Sbjct: 290 QAQAVFDAVGRGQKPEPWNAIIDGYCKLGHVDVARSLFDQMGARDVITFNSMITGYIHSG 349
Query: 153 KGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY 212
+ +A+ LF QM + A++ T VSLL AC+ G G L +R + Y
Sbjct: 350 RLRDALQLFMQMRRHGMRADNFTVVSLLTACASLGALPHGRA---LHASIEQRIVEEDVY 406
Query: 213 --TCVVDLLGRCGYLDEAAALIRNM 235
T ++D+ +CG +DEA A+ M
Sbjct: 407 LGTALLDMYMKCGRVDEATAVFHRM 431
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 94/180 (52%), Gaps = 5/180 (2%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E D+ G++L MYMK G + E V M R+V W +IAG A NG+ +D L+ +
Sbjct: 402 EEDVYLGTALLDMYMKCGRVDEATAVFHRMGERDVHTWTAMIAGLAFNGMGKDALESFCQ 461
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV--ISSLISMYSRC 120
M+ GF+P +T+++V+++CS + L +G ++H +++ L V +I + +R
Sbjct: 462 MKRDGFQPTSVTYIAVLTACSHSSLLDEG-RLHFNEMRSLHKLHPQVEHYGCMIDLLARS 520
Query: 121 GCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G LD+++ + V+W S+++A H + A + E + + E D +V L
Sbjct: 521 GLLDEAMHLVQTMPMQPNAVIWGSILSACRVHKNIDLARHAAEHLLKLAPE-EDAVYVQL 579
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 109 VISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE 168
V + LI MY+ G DD+ + F E D V+W+++I G +EA L Q ++
Sbjct: 142 VANPLIHMYASMGLTDDARRAFDEIPAKDAVVWATVIGGLVRWGLLDEARRLLVQAPER- 200
Query: 169 FEANDVTFVSLLYACSHCGLKEKGMEFFDLMV 200
N V++ SL+ S G + F+ M+
Sbjct: 201 ---NVVSWTSLIAGYSRAGRPADAVYCFNCML 229
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 168/435 (38%), Positives = 255/435 (58%), Gaps = 15/435 (3%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+SL MY K + + + R +++W +I G AQNG + L+ ++ M+ +
Sbjct: 376 NSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVK 435
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
PD T+VSVI++ +EL+ + IH V++ +V V ++L+ MY++CG + +
Sbjct: 436 PDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLI 495
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F V W++MI YG HG G+ A+ LFE+M++ N VTF+S++ ACSH GL
Sbjct: 496 FDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACSHSGLV 555
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
E G++ F +M + Y +P ++HY +VDLLGR G L+EA I MPVK ++ +L
Sbjct: 556 EAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLG 615
Query: 250 ACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKE 309
AC+ HK+ + A ++AE + +NP+D +VLL+NI+ +A W+ V + R +M + ++K
Sbjct: 616 ACQIHKNVNFAEKVAERLFELNPEDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKT 675
Query: 310 PGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEK 369
PG S +EIKN+VH F G +HP S +I +LE+L ++K GYVPDT + ++ + K
Sbjct: 676 PGCSMVEIKNEVHSFFSGSTAHPSSKKIYAFLEKLICQIKEAGYVPDTNLIL-GLEDDVK 734
Query: 370 EYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNREIIVRDASR 415
E L HSEKLAI+F T G + + KYIS + REIIVRD R
Sbjct: 735 EQLLSSHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIIVRDMQR 794
Query: 416 FHHFRNGKCSCGDYW 430
FHHF+NG CSCGDYW
Sbjct: 795 FHHFKNGACSCGDYW 809
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 132/248 (53%), Gaps = 2/248 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF LDL A + L +MY K + E KV MP R++++W T++AG +QNG+A L+
Sbjct: 165 GFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMV 224
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
NLM +P IT VSV+ + S L + G++IH ++AG V + ++L+ MY++C
Sbjct: 225 NLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKC 284
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L + F +VV W+SMI AY + +EA+ +F++M + + DV+ + L
Sbjct: 285 GSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGAL 344
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
+AC+ G E+G F + + + ++ + +C +D AA++ + +
Sbjct: 345 HACADLGDLERG-RFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSR-T 402
Query: 241 AIIWKTLL 248
+ W ++
Sbjct: 403 IVSWNAMI 410
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 133/267 (49%), Gaps = 2/267 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ + ++L MY K GSL + M RNV++W ++I QN ++ + +
Sbjct: 266 GFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIF 325
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G +P ++ + + +C++L L +G+ IH V+ +V V++SLISMY +C
Sbjct: 326 QKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKC 385
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
+D + F + + +V W++MI + +G+ EA+N F QM+ + + + T+VS++
Sbjct: 386 KEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVI 445
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
A + + ++++ K + T +VD+ +CG + A LI +M + +
Sbjct: 446 TAIAELSITHHAKWIHGVVMRNCLDK-NVFVTTALVDMYAKCGAI-MIARLIFDMMSERH 503
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEI 267
W ++ TH A + EE+
Sbjct: 504 VTTWNAMIDGYGTHGIGKAALELFEEM 530
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 138/289 (47%), Gaps = 23/289 (7%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+ L ++ + GS+ E +V + + + + T++ G A+ + L + MR
Sbjct: 73 TKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVE 132
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P F ++ C + A L G++IH +VK+G SLD+ ++ L +MY++C + ++ K
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKV 192
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F D+V W++++A Y +G A+ + M ++ + + +T VS+L A S L
Sbjct: 193 FDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLI 252
Query: 190 EKGMEF--------FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
G E FD +V T +VD+ +CG L A L M ++ N
Sbjct: 253 RIGKEIHGYAMRAGFDSLVNI---------ATALVDMYAKCGSLKTARLLFDGM-LERNV 302
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASA 288
+ W +++ A +++ A I +++L GV P D + ++ +HA A
Sbjct: 303 VSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVS---VMGALHACA 348
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 165/450 (36%), Positives = 260/450 (57%), Gaps = 30/450 (6%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D++ + + ++ SG + + + M RN W +++AG A GL ++ + + M
Sbjct: 645 DVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEML 704
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAG-ASLDVGVISSLISMYSRCGCL 123
D +T V++++ CS L L G Q+H+ ++K G + V + ++L+ MYS+CG +
Sbjct: 705 ESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAI 764
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
+ F ++V W++MI+ Y HG +EA+ L+E+M +K N+VTF+++L AC
Sbjct: 765 TKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSAC 824
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
SH GL E+G+ F M + Y + + EHYTC+VDLLGR G L++A + MP++
Sbjct: 825 SHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVST 884
Query: 244 WKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
W LL AC+ HK DM A+ + ++PQ+ PYV++SNI+A+A RW+ V + R+ M+
Sbjct: 885 WGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKM 944
Query: 304 RNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG---AD 360
+ VKK+PGVSW+EI +++ F G K+HP++ EI L LT + K GY+PDT +
Sbjct: 945 KGVKKDPGVSWIEINSEIQIFHAGSKTHPKTEEIYNNLRHLTLQSKGLGYIPDTSFILQN 1004
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP--------------------FKYI 400
+ D+ EE+E L HSE+LA++ ++ LP K+I
Sbjct: 1005 VKDIKEEEEEEYLLQHSERLALSLG------LISLPKKSTIRVFKNLRICGDCHTATKFI 1058
Query: 401 SEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
S+I R II RD +RFHHF NGKCSCGDYW
Sbjct: 1059 SKITGRRIIARDTNRFHHFENGKCSCGDYW 1088
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 137/247 (55%), Gaps = 3/247 (1%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D++ GS+L MY K G + E +V R + RN +++ L+AG Q G AE+ L+ Y+ M+
Sbjct: 411 DIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQ 470
Query: 65 MV-GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
G +PD+ TF ++++ C+ QG+QIHA +++A + ++ V + L+ MYS CG L
Sbjct: 471 SEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRL 530
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
+ + + F + W+SMI Y +G+ +EA+ LF+QM+ + + + S+L +C
Sbjct: 531 NYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSC 590
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
+KG E + +V+ + + +VD+ +CG +D A + + +K + I+
Sbjct: 591 VSLSDSQKGRELHNFIVRNTMEEEGILQ-VVLVDMYAKCGSMDYAWK-VYDQTIKKDVIL 648
Query: 244 WKTLLSA 250
++SA
Sbjct: 649 NNVMVSA 655
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 158/336 (47%), Gaps = 34/336 (10%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
+++ + L HMY + G L +++ M RN +W ++I G QNG ++ L + M+
Sbjct: 513 NIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQ 572
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+ G +PD + S++SSC L+ +G+++H +V+ + + L+ MY++CG +D
Sbjct: 573 LNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMD 632
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQK----------------- 167
+ K + + DV+L + M++A+ G+ +A NLF+QMEQ+
Sbjct: 633 YAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGL 692
Query: 168 --------------EFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYT 213
+ E + +T V+++ CS E G + L++KK + T
Sbjct: 693 KKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLET 752
Query: 214 CVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVN 271
+VD+ +CG + +A + NM K N + W ++S H + A + EE+ G+
Sbjct: 753 ALVDMYSKCGAITKARTVFDNMNGK-NIVSWNAMISGYSKHGCSKEALILYEEMPKKGMY 811
Query: 272 PQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVK 307
P + +LS + +G+ F + N++
Sbjct: 812 PNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIE 847
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 143/275 (52%), Gaps = 5/275 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ D G++L MY K KV M RN + W ++I+ +AQ G D L +
Sbjct: 306 GFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLF 365
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G++ ++ S++ + + LA +G+G+++H +V+ + D+ + S+L+ MYS+C
Sbjct: 366 LRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKC 425
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE-FEANDVTFVSL 179
G ++++ + F + V +++++A Y GK EEA+ L+ M+ ++ + + TF +L
Sbjct: 426 GMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTL 485
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L C++ +G + +++ K + T +V + CG L+ A + M +
Sbjct: 486 LTLCANQRNDNQGRQIHAHLIRANITKNIIVE-TELVHMYSECGRLNYAKEIFNRM-AER 543
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNP 272
NA W +++ + + T A R+ +++ G+ P
Sbjct: 544 NAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKP 578
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 127/254 (50%), Gaps = 7/254 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVE---GEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVL 57
G+ D + + +Y +SG L + K+ MP RN+ AW T+I A+ +VL
Sbjct: 101 GYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEVL 160
Query: 58 DQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMY 117
Y MR G DK TF SVI +C + +G +Q+ + VVKAG + ++ V +L+ Y
Sbjct: 161 RLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGY 220
Query: 118 SRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
+R G +DD+V + E E + VV W+++IA Y EEA +F++M + ++ TF
Sbjct: 221 ARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFA 280
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAAL-IRNMP 236
S L C ++ G + ++ + ++D+ +C DE + L + +
Sbjct: 281 SALRVCGALRSRDGGKQVHSKLIACGFKGDTFVG-NALIDMYAKCD--DEESCLKVFDEM 337
Query: 237 VKANAIIWKTLLSA 250
+ N + W +++SA
Sbjct: 338 GERNQVTWNSIISA 351
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 123/250 (49%), Gaps = 2/250 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +L G +L Y + G + + + + +V+ W +IAG + E+ +
Sbjct: 205 GLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIF 264
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M +G PD TF S + C L + G+Q+H++++ G D V ++LI MY++C
Sbjct: 265 DRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKC 324
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
+ +K F E + V W+S+I+A G +A+ LF +M++ +++N S+L
Sbjct: 325 DDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSIL 384
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
A + KG E +V+ + + +VD+ +CG ++EA + R++ ++ N
Sbjct: 385 MASAGLADIGKGRELHGHLVRNLLNSDIILG-SALVDMYSKCGMVEEAHQVFRSL-LERN 442
Query: 241 AIIWKTLLSA 250
+ + LL+
Sbjct: 443 EVSYNALLAG 452
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 62/116 (53%), Gaps = 3/116 (2%)
Query: 71 DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD---SV 127
+ + + S+I C + + +G+ IH +++ G + D +++ ++ +Y+R GCLDD +
Sbjct: 70 NPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYAR 129
Query: 128 KTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
K F E ++ W++MI AY E + L+ +M ++ TF S++ AC
Sbjct: 130 KLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKAC 185
>gi|449442683|ref|XP_004139110.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449516005|ref|XP_004165038.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 609
Score = 325 bits (832), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 169/443 (38%), Positives = 262/443 (59%), Gaps = 17/443 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ + + + Y + G + E ++ MP ++V++W T+I+G Q G + LD ++ M
Sbjct: 167 DMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTTMISGCLQVGYFMEALDIFHNML 226
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G P++ T S +++C+ L L QG+ +H + K ++ +++ LI MY++CG L+
Sbjct: 227 AKGMSPNEYTLASSLAACANLVALDQGRWMHVYIKKNNIQMNERLLAGLIDMYAKCGELE 286
Query: 125 DSVKTFLECEY--SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
+ K F V W++MI + HGK +EAI +FEQM+ ++ N VTFV+LL A
Sbjct: 287 FASKLFNSNPRLKRKVWPWNAMIGGFAVHGKSKEAIEVFEQMKIEKVSPNKVTFVALLNA 346
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
CSH E+G +F+ M YR KP LEHY C+VDLLGR G L EA +I +M + +
Sbjct: 347 CSHGNRVEEGRYYFESMASHYRVKPELEHYGCLVDLLGRAGRLKEAEEIISSMHLTPDVA 406
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMR 302
IW LLSACK HK +M R+ + + ++P +VLL+NI++ W RE +
Sbjct: 407 IWGALLSACKIHKDAEMGERVGKIVKELDPNHLGCHVLLANIYSLTGNWNEARTLREKIA 466
Query: 303 ERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMH 362
E KK PG S +E+ HQF +GD+SHP++ ++ L+L+E+ +++K+ GY+P++G +
Sbjct: 467 ESGKKKTPGCSSIELNGMFHQFLVGDRSHPQTKQLYLFLDEMITKLKIAGYIPESGEVLL 526
Query: 363 DM-DSEEKEYNLKHHSEKLAIAFA-----EHTRGLIVM---------LPFKYISEIKNRE 407
D+ D+E++E L HSEKLAIAF T IV L K+IS++ +RE
Sbjct: 527 DIDDNEDRETALLKHSEKLAIAFGLMNTTPKTPIRIVKNLRVCSDCHLAIKFISKVYDRE 586
Query: 408 IIVRDASRFHHFRNGKCSCGDYW 430
IIVRD R+HHF++G CSC DYW
Sbjct: 587 IIVRDRIRYHHFKDGTCSCNDYW 609
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 111/283 (39%), Gaps = 35/283 (12%)
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+L+R P++ +F C + +G+Q+ +K G ++ V ++LI MY
Sbjct: 91 SLIREERLVPNQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNL 150
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE------------ 168
+ D+ K F D+ W+ M++ Y GK +EA LF++M +K+
Sbjct: 151 DFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTTMISGCL 210
Query: 169 -------------------FEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRL 209
N+ T S L AC++ ++G + + +KK +
Sbjct: 211 QVGYFMEALDIFHNMLAKGMSPNEYTLASSLAACANLVALDQG-RWMHVYIKKNNIQMNE 269
Query: 210 EHYTCVVDLLGRCGYLDEAAALIRNMP-VKANAIIWKTLLSACKTHKSTDMAGRIAEE-- 266
++D+ +CG L+ A+ L + P +K W ++ H + A + E+
Sbjct: 270 RLLAGLIDMYAKCGELEFASKLFNSNPRLKRKVWPWNAMIGGFAVHGKSKEAIEVFEQMK 329
Query: 267 ILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKE 309
I V+P LL+ + +G F VK E
Sbjct: 330 IEKVSPNKVTFVALLNACSHGNRVEEGRYYFESMASHYRVKPE 372
>gi|297806459|ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297316950|gb|EFH47372.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 637
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 167/449 (37%), Positives = 269/449 (59%), Gaps = 24/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
+L+L G++L +Y K G + + +V M ++ + W +++AG Q+ E+ L Y
Sbjct: 194 SLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSKNYEEALLLY 253
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ + ++ T SVI +CS LA L +G+Q+HA + K+G +V V SS + MY++C
Sbjct: 254 RRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSNVFVASSAVDMYAKC 313
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L +S F E + ++ LW+++I+ + H + +E + LFE+M+Q N+VTF SLL
Sbjct: 314 GSLRESYIIFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLL 373
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
C H GL E+G FF LM Y P + HY+C+VD+LGR G L EA LI+++P +
Sbjct: 374 SVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFEPT 433
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A IW +LL++C+ K+ ++A A+++ + P++A +VLLSNI+A+ K+W+ +++ R+
Sbjct: 434 ASIWGSLLASCRVCKNLELAEVAAKKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKL 493
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
+R+ +VKK G SW++IK++VH F +G+ SHPR EI L+ L E++ GY P +
Sbjct: 494 LRDCDVKKVRGQSWIDIKDKVHIFRVGESSHPRIREICTMLDNLVIELRKFGYKPSVEHE 553
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPFKYISEIKN--------------- 405
+HD++ +KE L HSEKLA+ F GL+ + + +KN
Sbjct: 554 LHDVEIGKKEELLMQHSEKLALVF-----GLMCLPEGSTVRIMKNLRICVDCHEFMKAAS 608
Query: 406 ----REIIVRDASRFHHFRNGKCSCGDYW 430
R IIVRDA+RFHHF +G CSCG++W
Sbjct: 609 MATRRFIIVRDANRFHHFSDGHCSCGEFW 637
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 138/280 (49%), Gaps = 4/280 (1%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ + L + Y K G + +V M R++++W T+I +N + + LD + MR
Sbjct: 97 DVTLSNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFWEMR 156
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
GF+ + T SV+S+C + +++H +K L++ V ++L+ +Y++CG ++
Sbjct: 157 NEGFKFSEFTISSVLSACGANCDALECKKLHCLSMKTSLDLNLYVGTALLDLYAKCGMIN 216
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D+V+ F + V WSSM+A Y EEA+ L+ + ++ E N T S++ ACS
Sbjct: 217 DAVQVFESMQDKSSVTWSSMVAGYVQSKNYEEALLLYRRAQRMSLEQNQFTLSSVICACS 276
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
+ +G + +++K + + VD+ +CG L E+ + + K N +W
Sbjct: 277 NLAALIEGKQ-MHAVIRKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEK-NIELW 334
Query: 245 KTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLS 282
T++S H + E++ G++P + LLS
Sbjct: 335 NTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLS 374
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 89/178 (50%), Gaps = 6/178 (3%)
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
F+ ++ C+ + + + H + ++ DV + + LI+ YS+CG ++ + + F
Sbjct: 66 FIEILQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDGML 125
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGME 194
+V W++MI Y + EA+++F +M + F+ ++ T S+L A CG +E
Sbjct: 126 ERSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSA---CGANCDALE 182
Query: 195 FFDLMVKKYRRKPRLEHY--TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
L + L Y T ++DL +CG +++A + +M K+ ++ W ++++
Sbjct: 183 CKKLHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKS-SVTWSSMVAG 239
>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
Length = 803
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 163/443 (36%), Positives = 263/443 (59%), Gaps = 15/443 (3%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
+L++++ ++L Y+K G + +V +M R+VIAW +I G QNG ++ ++ +
Sbjct: 361 DLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRS 420
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M G P+ T +V+S+C+ LA LG G+QIH +++ V V +++I++Y+R G
Sbjct: 421 MIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQSVSVSNAIITVYARSGS 480
Query: 123 LDDSVKTFLE-CEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+ + + F + C + V W+SMI A HG GE+AI LFE+M + + + VT++ +
Sbjct: 481 VPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEMLRVGVKPDRVTYIGVFS 540
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
AC+H G +KG +++ M+ ++ P + HY C+VDLL R G L EA I+ MPV +
Sbjct: 541 ACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLARAGLLTEAHEFIQRMPVAPDT 600
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
++W +LL+AC+ K+ D+A AE++L ++P ++ Y L+N++++ RW + +
Sbjct: 601 VVWGSLLAACRVRKNADLAELAAEKLLSIDPDNSGAYSALANVYSACGRWNDAARIWKLR 660
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
+++ VKKE G SW ++++VH F D HP+ I E+ E+K G+VPD + +
Sbjct: 661 KDKAVKKETGFSWTHVQSKVHVFGADDVLHPQRDAICKKAAEMWEEIKKAGFVPDLNSVL 720
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFA-----EHTRGLIVM---------LPFKYISEIKNRE 407
HD+D E KE L HSEKLAIAF E T I+ K+IS++ +RE
Sbjct: 721 HDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRIMKNLRVCNDCHTAIKFISKVVDRE 780
Query: 408 IIVRDASRFHHFRNGKCSCGDYW 430
IIVRDA+RFHHFR+G CSC DYW
Sbjct: 781 IIVRDATRFHHFRDGYCSCKDYW 803
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 110/216 (50%), Gaps = 7/216 (3%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+SL MY KSG L + V MP R+ ++W ++ G + G D + + M G
Sbjct: 101 NSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGEGLA 160
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P + +V+SSC+ G G+++H+ V+K G S V V +S++ MY +CG + +
Sbjct: 161 PSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETARAV 220
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F + W++M++ Y G+ + A+++FE ME++ V++ +++ + GL
Sbjct: 221 FERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSI----VSWNAIIAGYNQNGLD 276
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYL 225
+ ++FF M+ +P + +T V +L C L
Sbjct: 277 DMALKFFSRMLTASSMEP--DEFT-VTSVLSACANL 309
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 133/306 (43%), Gaps = 38/306 (12%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVG-F 68
+++ +Y G + + M R++++W +IAG QNGL + L ++ M
Sbjct: 233 NAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDDMALKFFSRMLTASSM 292
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD--- 125
PD+ T SV+S+C+ L L G+Q+H+ +++ G ++++LIS Y++ G ++
Sbjct: 293 EPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALISTYAKSGSVETARR 352
Query: 126 -------------SVKTFLE-----------------CEYSDVVLWSSMIAAYGFHGKGE 155
S LE DV+ W++MI Y +G+ +
Sbjct: 353 IMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQND 412
Query: 156 EAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV 215
EA+ LF M + E N T ++L AC+ G + ++ + + + +
Sbjct: 413 EAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQS-VSVSNAI 471
Query: 216 VDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQ 273
+ + R G + A + + + + W +++ A H + A + EE+L GV P
Sbjct: 472 ITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEMLRVGVKP- 530
Query: 274 DAAPYV 279
D Y+
Sbjct: 531 DRVTYI 536
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 6/95 (6%)
Query: 91 GQQIHAEVVKAGASLDVGVISSLISMYSRC----GCLDDSVKTFLECEYS--DVVLWSSM 144
G+ IHA VKAG + + ++L+S Y+R GC ++ + F + Y+ + W+S+
Sbjct: 44 GRAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARRLFDDIPYARRNAFTWNSL 103
Query: 145 IAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
++ Y G+ +A +F QM +++ + V V L
Sbjct: 104 LSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGL 138
>gi|224118652|ref|XP_002331415.1| predicted protein [Populus trichocarpa]
gi|222873629|gb|EEF10760.1| predicted protein [Populus trichocarpa]
Length = 458
Score = 324 bits (831), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 168/434 (38%), Positives = 244/434 (56%), Gaps = 15/434 (3%)
Query: 12 LAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPD 71
L MY K G L+ KV + ++ V W ++I G G + L + + +P+
Sbjct: 25 LLGMYAKCGDLISARKVFDMALVKTVFLWTSIIGGYTHMGYPAEALLLFKKLLKTAIKPN 84
Query: 72 KITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFL 131
T +++S+C++L +L G++I ++ G D V +SLI M+S+CG + ++ F
Sbjct: 85 GATLATILSACADLGSLDMGKEIEEYILSNGFQSDRQVQTSLIHMFSKCGSIGKAISVFE 144
Query: 132 ECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM-EQKEFEANDVTFVSLLYACSHCGLKE 190
D+ WSSMI Y HG EEA+ LF +M E KE + + V F S+L ACSH GL E
Sbjct: 145 RISDKDLAAWSSMINGYAIHGMAEEALGLFHKMLEIKEIKPDAVVFTSILLACSHVGLVE 204
Query: 191 KGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
G++FF M K + P +EHY C+VDLLGR G + A IR MPVK A +W LSA
Sbjct: 205 DGLKFFKSMQKDFGIVPSVEHYMCLVDLLGRAGQFELALKTIRVMPVKLQAQVWAPFLSA 264
Query: 251 CKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEP 310
C H + ++ A ++L +NP A YVL++N++ S +W+ + R M +R + K P
Sbjct: 265 CTKHCNLELGELAARKLLYMNPGSHANYVLMANLYTSMGKWKEAAVTRSLMIDRGLVKAP 324
Query: 311 GVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKE 370
G S +EI VH F GD+SH +S++I LEE+ ++ GYVP+T +HD++ EEKE
Sbjct: 325 GWSQVEINGSVHVFIAGDRSHTQSIDIYKKLEEINLKLAEAGYVPETDTVIHDLEREEKE 384
Query: 371 YNLKHHSEKLAIAFA--------------EHTRGLIVMLPFKYISEIKNREIIVRDASRF 416
LK HSE+LAIAF H + K+IS+I R +IVRD SRF
Sbjct: 385 EALKVHSERLAIAFGLISTEAGSTLRIMKNHRTCVDCHSALKFISKITGRHLIVRDGSRF 444
Query: 417 HHFRNGKCSCGDYW 430
HHF +GKC+C D+W
Sbjct: 445 HHFESGKCTCKDFW 458
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 71/137 (51%), Gaps = 12/137 (8%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ D +SL HM+ K GS+ + V + +++ AW ++I G A +G+AE+ L +
Sbjct: 115 GFQSDRQVQTSLIHMFSKCGSIGKAISVFERISDKDLAAWSSMINGYAIHGMAEEALGLF 174
Query: 61 N-LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISS------L 113
+ ++ + +PD + F S++ +CS + + G + + K D G++ S L
Sbjct: 175 HKMLEIKEIKPDAVVFTSILLACSHVGLVEDGLKFFKSMQK-----DFGIVPSVEHYMCL 229
Query: 114 ISMYSRCGCLDDSVKTF 130
+ + R G + ++KT
Sbjct: 230 VDLLGRAGQFELALKTI 246
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 85/180 (47%), Gaps = 9/180 (5%)
Query: 91 GQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGF 150
+H+ + K G + + L+ MY++CG L + K F V LW+S+I Y
Sbjct: 3 ASSLHSLIFKCGCENKDPLDNLLLGMYAKCGDLISARKVFDMALVKTVFLWTSIIGGYTH 62
Query: 151 HGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLE 210
G EA+ LF+++ + + N T ++L AC+ G + G E + ++ + R +
Sbjct: 63 MGYPAEALLLFKKLLKTAIKPNGATLATILSACADLGSLDMGKEIEEYILSNGFQSDR-Q 121
Query: 211 HYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGV 270
T ++ + +CG + +A ++ + K A W ++++ H +AEE LG+
Sbjct: 122 VQTSLIHMFSKCGSIGKAISVFERISDKDLA-AWSSMINGYAIHG-------MAEEALGL 173
>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
Length = 619
Score = 324 bits (831), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 167/436 (38%), Positives = 256/436 (58%), Gaps = 32/436 (7%)
Query: 15 MYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKIT 74
M+ ++ S+ +G M +++++W ++I G A NGL ++ LD + M GFRPD
Sbjct: 196 MFRRACSVFDG------MLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYA 249
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVI-SSLISMYSRCGCLDDSVKTFLEC 133
V V+ +C+ L L G + ++ L V+ ++LI MY++CG +D + + F
Sbjct: 250 MVGVLCACARLGALELGNWA-SNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGM 308
Query: 134 EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGM 193
D+V+W++ I+ G + A LF QME+ E + TFV LL AC+H GL ++G
Sbjct: 309 RKKDIVVWNAAISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGR 368
Query: 194 EFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKT 253
++F+ M + + P +EHY C+VDLLGR G+LDEA L+++MP++ANAI+W LL C+
Sbjct: 369 QYFNSMERVFTLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGGCRL 428
Query: 254 HKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVS 313
H+ T + + ++++ + P ++ YVLLSNI++++ +W+ ++ R M ER +KK PG S
Sbjct: 429 HRDTQLVEGVLKQLIALEPSNSGNYVLLSNIYSASHKWEDAAKIRSIMSERGIKKVPGYS 488
Query: 314 WLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNL 373
W+E+ VH+F +GD SHP S +I L EL ++K GYVP T + D++ EEKE+ +
Sbjct: 489 WIEVDGVVHEFLVGDTSHPLSEKIYAKLGELVKDLKASGYVPTTDYVLFDIEEEEKEHFI 548
Query: 374 KHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREIIVRDAS 414
HSEKLAIAF GLI P K+IS REIIVRD +
Sbjct: 549 GCHSEKLAIAF-----GLISTAPNDKIRVVKNLRVCGDCHEAIKHISRFTGREIIVRDNN 603
Query: 415 RFHHFRNGKCSCGDYW 430
RFH F +G CSC DYW
Sbjct: 604 RFHCFNDGSCSCKDYW 619
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 118/254 (46%), Gaps = 42/254 (16%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
N+ + T+I G N ++ ++ Y+ MR G PD TF ++ +C+ L G ++H
Sbjct: 72 NIFLFNTMIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLH 131
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLE---------------------CE 134
VVKAG D V +SL+S+Y +CG +D++ K F + C
Sbjct: 132 GLVVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCR 191
Query: 135 YS-----------------DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
+ D+V WSSMI Y +G +EA++LF +M + F + V
Sbjct: 192 EAIDMFRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMV 251
Query: 178 SLLYACSHCGLKEKGMEFFDLMVK-KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
+L AC+ G E G +LM + ++ P L T ++D+ +CG +D A + R M
Sbjct: 252 GVLCACARLGALELGNWASNLMDRNEFLGNPVLG--TALIDMYAKCGRMDSAWEVFRGMR 309
Query: 237 VKANAIIWKTLLSA 250
K + ++W +S
Sbjct: 310 -KKDIVVWNAAISG 322
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 95/205 (46%), Gaps = 6/205 (2%)
Query: 87 TLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIA 146
+L + +HA +++ G D +++ ++ G + S + F + + ++ L+++MI
Sbjct: 22 SLKHLKHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNTMIH 81
Query: 147 AYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRK 206
+ +E+I ++ M ++ + TF LL AC+ + G++ L+VK
Sbjct: 82 GLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAGCES 141
Query: 207 PRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA----CKTHKSTDMAGR 262
+ T +V L G+CG++D A + ++P K N W ++S K ++ DM R
Sbjct: 142 DAFVN-TSLVSLYGKCGFIDNAFKVFDDIPEK-NVAAWTAIISGYIGVGKCREAIDMFRR 199
Query: 263 IAEEILGVNPQDAAPYVLLSNIHAS 287
G+ +D + + +AS
Sbjct: 200 ACSVFDGMLEKDIVSWSSMIQGYAS 224
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/182 (20%), Positives = 83/182 (45%), Gaps = 3/182 (1%)
Query: 7 VAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV 66
V G++L MY K G + +V R M ++++ W I+G A +G + + M
Sbjct: 283 VLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAISGLAMSGHVKAAFGLFGQMEKS 342
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGA-SLDVGVISSLISMYSRCGCLDD 125
G PD TFV ++ +C+ + +G+Q + + + ++ ++ + R G LD+
Sbjct: 343 GIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMERVFTLTPEIEHYGCMVDLLGRAGFLDE 402
Query: 126 SVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE-FEANDVTFVSLLYAC 183
+ + ++ ++W +++ H + + +Q+ E + + +S +Y+
Sbjct: 403 AHQLVKSMPMEANAIVWGALLGGCRLHRDTQLVEGVLKQLIALEPSNSGNYVLLSNIYSA 462
Query: 184 SH 185
SH
Sbjct: 463 SH 464
>gi|413945386|gb|AFW78035.1| hypothetical protein ZEAMMB73_343828 [Zea mays]
Length = 608
Score = 324 bits (831), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 177/475 (37%), Positives = 256/475 (53%), Gaps = 46/475 (9%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
+ D V SSL MY K G + KV + ++N + W LI+G A NG + LD +
Sbjct: 134 YSADNVVKSSLIDMYCKCGVPQDARKVFDSIGVKNSVVWTALISGYASNGCTGEALDLFQ 193
Query: 62 LMRMVGF--------------------------RPDKI------TFVSVISSCSELATLG 89
M G R D I +VI ++LA L
Sbjct: 194 SMPAHGLFTWTALISGFVKAGNYTGAMGLFVEMRRDDIRIHDAFVLATVIGGAADLAALV 253
Query: 90 QGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYG 149
G+Q+H V++ G + V ++L+ MYS+C + + + F DV+ W++++
Sbjct: 254 LGRQLHGFVMRLGFLSSMIVGNALVDMYSKCSDIHSAREVFEGITVRDVISWTTILVGEA 313
Query: 150 FHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRL 209
HG+ EE L+ +M + N+VTFV L+YACSH GL +KG + FD M ++Y KP +
Sbjct: 314 QHGRAEEVFALYNRMLLAGMKPNEVTFVGLIYACSHAGLVQKGRQLFDSMKREYGMKPGV 373
Query: 210 EHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILG 269
+HYTC +DLL R GYL EA LI MP + + W LLSACK H T M R+A+ +L
Sbjct: 374 QHYTCYLDLLSRSGYLSEAEKLITTMPYEPDEATWGALLSACKKHNDTQMCLRVADNLLE 433
Query: 270 VNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDK 329
+ P+D + Y+LLSN++A +W V++ R+ M E ++K PG SW+E + F G+
Sbjct: 434 LRPKDPSTYILLSNVYAVNCKWDSVAKVRKIMAEMEIRKVPGYSWVEAGRESRIFHAGEV 493
Query: 330 SHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFA--EH 387
EI +LEEL SEM+ RGYVPDT + MHD++ EKE +L HSE+LA+AF +
Sbjct: 494 PLDVGEEITCFLEELVSEMRKRGYVPDTSSVMHDLEEHEKEQHLFVHSERLAVAFGILKS 553
Query: 388 TRGLIVML------------PFKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
G ++ + K+IS I R+IIVRDASRFHHF +G CSC ++W
Sbjct: 554 PPGSVIRVVKNLRVCGDCHTVMKFISAIAQRKIIVRDASRFHHFEDGNCSCSEFW 608
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 96/185 (51%), Gaps = 3/185 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF ++ G++L MY K + +V + +R+VI+W T++ G+AQ+G AE+V Y
Sbjct: 266 GFLSSMIVGNALVDMYSKCSDIHSAREVFEGITVRDVISWTTILVGEAQHGRAEEVFALY 325
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSR 119
N M + G +P+++TFV +I +CS + +G+Q+ + + G V + + + SR
Sbjct: 326 NRMLLAGMKPNEVTFVGLIYACSHAGLVQKGRQLFDSMKREYGMKPGVQHYTCYLDLLSR 385
Query: 120 CGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQ-MEQKEFEANDVTFV 177
G L ++ K Y D W ++++A H + + + + +E + + + +
Sbjct: 386 SGYLSEAEKLITTMPYEPDEATWGALLSACKKHNDTQMCLRVADNLLELRPKDPSTYILL 445
Query: 178 SLLYA 182
S +YA
Sbjct: 446 SNVYA 450
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 79/160 (49%), Gaps = 5/160 (3%)
Query: 8 AGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV- 66
A + L Y +S L + + P R++ + L+A + + E VL L RM+
Sbjct: 38 APALLVSAYARSCLLPDARRAFDDAPRRDLHLYSALLAAVSHSSDPELVLPL--LRRMLS 95
Query: 67 --GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
RPD S+ S+ L +L G+Q+HA + S D V SSLI MY +CG
Sbjct: 96 DDALRPDHFVLASLASAAGRLRSLRLGRQLHAHFAASPYSADNVVKSSLIDMYCKCGVPQ 155
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM 164
D+ K F + V+W+++I+ Y +G EA++LF+ M
Sbjct: 156 DARKVFDSIGVKNSVVWTALISGYASNGCTGEALDLFQSM 195
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 74/171 (43%), Gaps = 5/171 (2%)
Query: 92 QQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFH 151
+++HA ++K G + + L+S Y+R L D+ + F + D+ L+S+++AA
Sbjct: 21 RRVHARLLKEGLADLPSAPALLVSAYARSCLLPDARRAFDDAPRRDLHLYSALLAAVSHS 80
Query: 152 GKGEEAINLFEQM-EQKEFEANDVTFVSLLYACSHCGLKEKGMEFF-DLMVKKYRRKPRL 209
E + L +M + SL A G + Y +
Sbjct: 81 SDPELVLPLLRRMLSDDALRPDHFVLASLASAAGRLRSLRLGRQLHAHFAASPYSADNVV 140
Query: 210 EHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMA 260
+ + ++D+ +CG +A + ++ VK N+++W L+S ++ T A
Sbjct: 141 K--SSLIDMYCKCGVPQDARKVFDSIGVK-NSVVWTALISGYASNGCTGEA 188
>gi|108864632|gb|ABG22571.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 324 bits (831), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 171/444 (38%), Positives = 259/444 (58%), Gaps = 25/444 (5%)
Query: 7 VAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV 66
V ++L Y +G E ++ R MP RN+ AW LI+G G + ++ + MR
Sbjct: 254 VVWTALVSGYASNGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGAVELFVEMRRD 313
Query: 67 GFRPDKITFVS-VISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD 125
G R D +S VI ++LA G+Q+H ++ G ++ V ++LI MYS+C +
Sbjct: 314 GVRIDDAFVLSIVIGGSADLAAFVLGRQLHGSTMRLGFLSNMIVGNALIDMYSKCSDILS 373
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
+ + F + DV+ W++M+ HG+ EEA+ L+++M + N+VTFV L+YACSH
Sbjct: 374 AREVFEGITFRDVISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPNEVTFVGLIYACSH 433
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
GL +KG + F+ M +Y PRL+HYTC +DLL R G+L EA L+ MP + + W
Sbjct: 434 AGLVQKGRQLFESMKNEYGITPRLQHYTCYLDLLSRSGHLLEAEELMTTMPYEPDEATWG 493
Query: 246 TLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERN 305
LLSAC +K +M RI++++L + P+D++ Y+LLSN++A +W V++ R+ M
Sbjct: 494 ALLSACTKYKDAEMCIRISDKLLELRPKDSSTYILLSNVYAVNGKWDSVAKVRKCMIGLE 553
Query: 306 VKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMD 365
++KEPG SW+E + F G+ EI ++LEE+ EM+ RGYVPDT + MHD++
Sbjct: 554 IRKEPGYSWIEAGREFRLFHAGEVPLDVREEIMVFLEEMVLEMRKRGYVPDTSSVMHDLE 613
Query: 366 SEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNR 406
EKE++L HSE+LA+AF GLI P K ISEI +R
Sbjct: 614 ESEKEHHLFLHSERLAVAF-----GLIKSPPGSVIRVVKNLRVCVDCHTVMKLISEITHR 668
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
+I+VRD+SRFHHF GKCSC ++W
Sbjct: 669 KIVVRDSSRFHHFEGGKCSCSEFW 692
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 99/185 (53%), Gaps = 3/185 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF +++ G++L MY K ++ +V + R+VI+W T++ G+AQ+G AE+ L Y
Sbjct: 350 GFLSNMIVGNALIDMYSKCSDILSAREVFEGITFRDVISWTTMVVGEAQHGRAEEALALY 409
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSR 119
+ M + G +P+++TFV +I +CS + +G+Q+ + G + + + + + SR
Sbjct: 410 DRMVLAGAKPNEVTFVGLIYACSHAGLVQKGRQLFESMKNEYGITPRLQHYTCYLDLLSR 469
Query: 120 CGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQ-MEQKEFEANDVTFV 177
G L ++ + Y D W ++++A + E I + ++ +E + +++ +
Sbjct: 470 SGHLLEAEELMTTMPYEPDEATWGALLSACTKYKDAEMCIRISDKLLELRPKDSSTYILL 529
Query: 178 SLLYA 182
S +YA
Sbjct: 530 SNVYA 534
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 5/188 (2%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV-GF 68
++L Y KS L + + P R++ + +L+ + + E L M
Sbjct: 124 AALVSAYAKSRLLPDALHLFDETPRRDIYIYSSLLTAVSHSASPELALPILRCMLSADAL 183
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
PD SV S + L + G+Q+HA V + + D V SSL+ MY +CG DD K
Sbjct: 184 HPDHFVISSVASVFARLRSRRLGRQLHAHFVVSPYNGDDVVKSSLVDMYCKCGSPDDGRK 243
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F + V+W+++++ Y +G+ EEA+ LF M + N + +L+ + G
Sbjct: 244 VFDSMSAKNSVVWTALVSGYASNGRSEEALQLFRSMPGR----NLFAWTALISGLVNTGE 299
Query: 189 KEKGMEFF 196
+E F
Sbjct: 300 SVGAVELF 307
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 81/180 (45%), Gaps = 5/180 (2%)
Query: 94 IHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGK 153
+HA ++K G + ++L+S Y++ L D++ F E D+ ++SS++ A
Sbjct: 107 MHARILKEGLAHHPPNPAALVSAYAKSRLLPDALHLFDETPRRDIYIYSSLLTAVSHSAS 166
Query: 154 GEEAINLFEQMEQKE-FEANDVTFVSLLYACSHCGLKEKGMEFF-DLMVKKYRRKPRLEH 211
E A+ + M + + S+ + + G + +V Y ++
Sbjct: 167 PELALPILRCMLSADALHPDHFVISSVASVFARLRSRRLGRQLHAHFVVSPYNGDDVVK- 225
Query: 212 YTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVN 271
+ +VD+ +CG D+ + +M K N+++W L+S ++ ++ A ++ + G N
Sbjct: 226 -SSLVDMYCKCGSPDDGRKVFDSMSAK-NSVVWTALVSGYASNGRSEEALQLFRSMPGRN 283
>gi|242080213|ref|XP_002444875.1| hypothetical protein SORBIDRAFT_07g000750 [Sorghum bicolor]
gi|241941225|gb|EES14370.1| hypothetical protein SORBIDRAFT_07g000750 [Sorghum bicolor]
Length = 583
Score = 324 bits (831), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 174/446 (39%), Positives = 262/446 (58%), Gaps = 16/446 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D ++L +Y K G L K+ + R+V+AW +I+G QNGLA ++ Y
Sbjct: 138 GFGSDRFVQTALVVLYSKCGKLDVARKLFDAIRDRSVVAWNAMISGYEQNGLAGRAIEVY 197
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
MR+ G PD TFV+ +S+C++ L G ++ +V ++V + ++L++MY+RC
Sbjct: 198 REMRVAGEAPDSATFVATLSACAQAGALDLGHEVERLIVSERMEMNVVLGAALVNMYARC 257
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ + + F + +VV W+SMIA YG HG G EA+ LF+ M Q+ NDVTFV++L
Sbjct: 258 GLVNKAREWFDMLQERNVVTWTSMIAGYGMHGHGGEAVKLFDLMRQQGPPPNDVTFVAVL 317
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRN-MPVKA 239
AC+H GL G + F M Y PR EHY +VD+ GR G LD+A I + +P +
Sbjct: 318 SACAHAGLVSDGRDAFASMKSVYGLVPRAEHYCSMVDMYGRAGLLDDAMQFIHDSIPGEP 377
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
+W +L ACK HK+ + +AE ++ + P++ + VLLSNI+A + + V + R
Sbjct: 378 GPEVWTAMLGACKMHKNFSLGVEVAERLIALEPENPSHRVLLSNIYALSGKMNHVEKVRN 437
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M +R +KK G S +EI H F MG+KSHP++ EI YLE+L + GY+P+T +
Sbjct: 438 TMIKRRLKKPIGYSLIEIGGVAHVFRMGEKSHPKTPEIYQYLEKLIHRITDAGYMPETDS 497
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFA-EHTRGLIV--------------MLPFKYISEIK 404
+H+++ EE+E+ L++H EKLA+AF T G L KY+S ++
Sbjct: 498 VLHELEEEEREFALRYHGEKLAVAFGLMMTSGCTAPIRIIKNLRICGDCHLAIKYMSAVE 557
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
NREIIVRD RFHHF+ GKCSC +YW
Sbjct: 558 NREIIVRDMHRFHHFKAGKCSCQEYW 583
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 104/222 (46%), Gaps = 2/222 (0%)
Query: 33 PIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQ 92
P + + +L A+ GL L Y + F SV +C++L+ L G
Sbjct: 69 PSPDSFLFCSLTRAAARRGLPAAALAFYRRLLAAALPFSSFAFTSVAKACADLSALRAGM 128
Query: 93 QIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHG 152
+HA V G D V ++L+ +YS+CG LD + K F VV W++MI+ Y +G
Sbjct: 129 GVHAHAVLLGFGSDRFVQTALVVLYSKCGKLDVARKLFDAIRDRSVVAWNAMISGYEQNG 188
Query: 153 KGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY 212
AI ++ +M + TFV+ L AC+ G + G E L+V + R + +
Sbjct: 189 LAGRAIEVYREMRVAGEAPDSATFVATLSACAQAGALDLGHEVERLIVSE-RMEMNVVLG 247
Query: 213 TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
+V++ RCG +++A +M + N + W ++++ H
Sbjct: 248 AALVNMYARCGLVNKAREWF-DMLQERNVVTWTSMIAGYGMH 288
>gi|317106614|dbj|BAJ53121.1| JHL07K02.11 [Jatropha curcas]
Length = 514
Score = 324 bits (831), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 176/434 (40%), Positives = 251/434 (57%), Gaps = 27/434 (6%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
+M+ G +KV MP R+V+ W ++I G +NG E+ L + M PDK TF
Sbjct: 89 FMRIGEYEIAKKVFCKMPDRDVVTWNSMIGGYVRNGKFEEALRSFQAMLSSNVEPDKFTF 148
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
SVI++C+ L L Q +H +V+ ++ + S+LI MYS+CG ++ + + F E
Sbjct: 149 ASVITACARLGALNHAQWLHDLMVQKRIEVNFILSSALIDMYSKCGRIETAKEVFESVER 208
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
+DV +W+S+I HG +A+ +F +ME + + +TF+ +L ACSHCGL ++G ++
Sbjct: 209 NDVSVWNSLINGLAVHGLALDAMMVFSKMEAENVLPDSLTFLGILKACSHCGLVKEGRKY 268
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK 255
FDLM Y KP+LEHY +VDLLGR G LDEA A+I MP++ + I+W+ LLSAC+TH+
Sbjct: 269 FDLMENYYSIKPQLEHYGAMVDLLGRAGLLDEAYAMITAMPMEPDVIVWRILLSACRTHR 328
Query: 256 STDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWL 315
+T++ G +A + ++ + YVLLSNI+ S RW E RE M+E V+K G SW
Sbjct: 329 NTEL-GEVA--VANISGPKSGDYVLLSNIYCSQNRWDNAQEVREMMKEEGVRKRRGKSWF 385
Query: 316 EIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKH 375
E ++ VH+F GDKSHP + + LE L KL G+VP T M D+ EEKE NL H
Sbjct: 386 EWEDVVHRFRAGDKSHPETEALYKILEGLIQRTKLEGFVPSTELVMMDVSEEEKEENLYH 445
Query: 376 HSEKLAIAFAEHTRGLIVMLPFKYISEIKNREI-------------------IVRDASRF 416
HSEKLA+A+ G++ P I KN I I+RD RF
Sbjct: 446 HSEKLALAY-----GILKTSPGTEIRIYKNLRICYDCHNWIKMVSGLLSRVIIIRDRIRF 500
Query: 417 HHFRNGKCSCGDYW 430
H F G CSCGDYW
Sbjct: 501 HRFEGGSCSCGDYW 514
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 91/218 (41%), Gaps = 35/218 (16%)
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD----- 124
PD F ++ +C + + H +++ G + + +SLIS Y C L+
Sbjct: 9 PDHQLFCDLLEACKLSQDIRTATETHTRIIRFGYGTNSSIAASLISTYVNCNQLNLAYQV 68
Query: 125 ------------------DSV----------KTFLECEYSDVVLWSSMIAAYGFHGKGEE 156
DS K F + DVV W+SMI Y +GK EE
Sbjct: 69 IRQVFSWTVSLAGLNLVIDSFMRIGEYEIAKKVFCKMPDRDVVTWNSMIGGYVRNGKFEE 128
Query: 157 AINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVV 216
A+ F+ M E + TF S++ AC+ G DLMV+K R + + ++
Sbjct: 129 ALRSFQAMLSSNVEPDKFTFASVITACARLGALNHAQWLHDLMVQK-RIEVNFILSSALI 187
Query: 217 DLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
D+ +CG ++ A + ++ + + +W +L++ H
Sbjct: 188 DMYSKCGRIETAKEVFESVE-RNDVSVWNSLINGLAVH 224
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 81/157 (51%), Gaps = 6/157 (3%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E++ + S+L MY K G + ++V + +V W +LI G A +GLA D + ++
Sbjct: 177 EVNFILSSALIDMYSKCGRIETAKEVFESVERNDVSVWNSLINGLAVHGLALDAMMVFSK 236
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV--ISSLISMYSRC 120
M PD +TF+ ++ +CS + +G++ + ++++ S+ + +++ + R
Sbjct: 237 MEAENVLPDSLTFLGILKACSHCGLVKEGRK-YFDLMENYYSIKPQLEHYGAMVDLLGRA 295
Query: 121 GCLDDSVK--TFLECEYSDVVLWSSMIAAYGFHGKGE 155
G LD++ T + E DV++W +++A H E
Sbjct: 296 GLLDEAYAMITAMPME-PDVIVWRILLSACRTHRNTE 331
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 324 bits (830), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 165/444 (37%), Positives = 257/444 (57%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D + L Y K L +V ++IA+ ++I +Q ED + +
Sbjct: 434 GFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLF 493
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G PD S++++C+ L+ QG+Q+HA ++K DV ++L+ Y++C
Sbjct: 494 MEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKC 553
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++D+ F VV WS+MI HG G+ A+++F +M + N +T S+L
Sbjct: 554 GSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVL 613
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+H GL ++ +F+ M + + + EHY C++DLLGR G LD+A L+ +MP + N
Sbjct: 614 CACNHAGLVDEAKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVNSMPFQTN 673
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A +W LL+A + H+ ++ AE++ + P+ + +VLL+N +ASA W V++ R+
Sbjct: 674 AAVWGALLAASRVHRDPELGRLAAEKLFILEPEKSGTHVLLANTYASAGMWDDVAKVRKL 733
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M++ VKKEP +SW+E+K++VH F +GDKSHPR+ +I L+EL M GYVP+ D
Sbjct: 734 MKDSKVKKEPAMSWVELKDKVHTFIVGDKSHPRARDIYAKLDELGDLMTKAGYVPNVEVD 793
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNR 406
+HD+D EKE L HHSE+LA+AFA G + + FK+IS+I +R
Sbjct: 794 LHDVDKNEKELLLSHHSERLAVAFALISTPAGAPIRVKKNLRICRDCHAAFKFISDIVSR 853
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EII+RD +RFHHFR+G CSC DYW
Sbjct: 854 EIIIRDINRFHHFRDGACSCRDYW 877
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 125/264 (47%), Gaps = 6/264 (2%)
Query: 12 LAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPD 71
L MY K G L + +KV +P R+++ W LI+G + + L + MR GF +
Sbjct: 344 LVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVN 403
Query: 72 KITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFL 131
+ T +V+ S + L + +Q+HA K G D V++ LI Y +C CL+ + + F
Sbjct: 404 RTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFE 463
Query: 132 ECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEK 191
+ D++ ++SMI A GE+AI LF +M +K + + SLL AC+ E+
Sbjct: 464 KHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQ 523
Query: 192 GMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSAC 251
G + ++K+ +V +CG +++A +P K + W ++
Sbjct: 524 GKQVHAHLIKRQFMSDVFAG-NALVYTYAKCGSIEDADLAFSGLPEKG-VVSWSAMIGGL 581
Query: 252 KTH----KSTDMAGRIAEEILGVN 271
H ++ D+ R+ +E + N
Sbjct: 582 AQHGHGKRALDVFHRMVDEHISPN 605
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 118/252 (46%), Gaps = 3/252 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPI-RNVIAWITLIAGKAQNGLAEDVLDQ 59
G D+ ++L MY G + E V RN ++W L++ +N +
Sbjct: 130 GLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKV 189
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ M G +P++ F V+++C+ L G+++HA V++ G DV ++L+ MYS+
Sbjct: 190 FGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSK 249
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G + + F + +DVV W++ I+ HG + A+ L QM+ N T S+
Sbjct: 250 LGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSI 309
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L AC+ G G + MVK + +VD+ + G LD+A + +P +
Sbjct: 310 LKACAGSGAFNLGRQIHGFMVKANADSDNYIAFG-LVDMYAKHGLLDDAKKVFDWIPQR- 367
Query: 240 NAIIWKTLLSAC 251
+ ++W L+S C
Sbjct: 368 DLVLWNALISGC 379
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 94/180 (52%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G++ D+ ++L MY K G + V +P +V++W I+G +G + L+
Sbjct: 232 GYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELL 291
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G P+ T S++ +C+ G+QIH +VKA A D + L+ MY++
Sbjct: 292 LQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKH 351
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G LDD+ K F D+VLW+++I+ + EA++LF +M ++ F+ N T ++L
Sbjct: 352 GLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVL 411
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 79/190 (41%), Gaps = 8/190 (4%)
Query: 87 TLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIA 146
+L QG IHA ++K+G L + L+S YS+C + + F E V WSS++
Sbjct: 19 SLLQGAHIHAHLLKSG--LFAVFRNHLLSFYSKCRLPGSARRVFDEIPDPCHVSWSSLVT 76
Query: 147 AYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRK 206
AY + +A+ F M N+ +L G G + L +
Sbjct: 77 AYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAPDAGF---GTQLHALAMAT-GLG 132
Query: 207 PRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEE 266
+ +V + G G++DEA + + N + W L+SA + A ++ E
Sbjct: 133 GDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGE 192
Query: 267 IL--GVNPQD 274
++ GV P +
Sbjct: 193 MVWGGVQPNE 202
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 324 bits (830), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 163/443 (36%), Positives = 262/443 (59%), Gaps = 15/443 (3%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
+L++++ ++L Y+K G + ++ +M R+V+AW +I G QNG ++ ++ + L
Sbjct: 360 DLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRL 419
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M G P+ T +V+S C+ LA L G+QIH + +++ V +S+++MY+R G
Sbjct: 420 MIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYARSGS 479
Query: 123 LDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
L + + F + + V W+SMI A HG GE+A+ LFE+M + + + +TFV +L
Sbjct: 480 LPWARRVFDRVHWRKETVTWTSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLS 539
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
AC+H G ++G +F + K+ P + HY C+VDLL R G EA I+ MPV+ +A
Sbjct: 540 ACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQMPVEPDA 599
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
I W +LLSAC+ HK+ D+A AE++L ++P ++ Y LSN++++ RW ++ +
Sbjct: 600 IAWGSLLSACRVHKNADLAELAAEKLLSIDPGNSGAYSALSNVYSACGRWNDAAKIWKRR 659
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
++++VKKE G SW I N+VH F D HP+ + ++ ++K G+VPD + +
Sbjct: 660 KDKSVKKETGFSWTHIGNRVHVFGADDVLHPQRDTVYRTAAKMWDDIKKAGFVPDLQSVL 719
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFA-----EHTRGLIVM---------LPFKYISEIKNRE 407
HD+D E KE L HSEKLAIAF E T I+ K+IS++ +RE
Sbjct: 720 HDVDDELKEEMLSRHSEKLAIAFGLVSTPEKTTLRIMKNLRVCNDCHTAIKFISKVADRE 779
Query: 408 IIVRDASRFHHFRNGKCSCGDYW 430
II+RDA+RFHHF++G CSC DYW
Sbjct: 780 IILRDATRFHHFKDGFCSCKDYW 802
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 107/216 (49%), Gaps = 7/216 (3%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+SL +Y KSG L + V MP R+ ++W ++ G + G + + + M G
Sbjct: 100 NSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDMVTDGLS 159
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P + T +V+SSC+ G G+++H+ VVK G S V V +S+++MY +CG + +
Sbjct: 160 PTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAETARAV 219
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F V W++M++ G+ + A++LFE M + V++ +++ + GL
Sbjct: 220 FERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTI----VSWNAVIAGYNQNGLN 275
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYL 225
K + FF M+ P + +T + +L C L
Sbjct: 276 AKALWFFSRMLSYSTMAP--DEFT-ITSVLSACANL 308
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 122/279 (43%), Gaps = 41/279 (14%)
Query: 32 MPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR---PDKITFVSVISSCSELATL 88
MP R +++W +IAG QNGL L + RM+ + PD+ T SV+S+C+ L +
Sbjct: 254 MPDRTIVSWNAVIAGYNQNGLNAKAL--WFFSRMLSYSTMAPDEFTITSVLSACANLGMV 311
Query: 89 GQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD----------------SVKTFLE 132
G+Q+HA ++++ V ++LISMY++ G +++ S LE
Sbjct: 312 SIGKQVHAYILRSRMPYIGQVTNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLE 371
Query: 133 -----------------CEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVT 175
DVV W++MI Y +G +EA+ LF M + E N T
Sbjct: 372 GYVKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYT 431
Query: 176 FVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM 235
++L C+ E G + ++ + + +V + R G L A + +
Sbjct: 432 VAAVLSVCASLACLEYGKQIHCKAIRSLQEQSS-SVSNSIVTMYARSGSLPWARRVFDRV 490
Query: 236 PVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNP 272
+ + W +++ A H + A + EE+L GV P
Sbjct: 491 HWRKETVTWTSMIVALAQHGLGEDAVGLFEEMLRVGVKP 529
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 83/216 (38%), Gaps = 52/216 (24%)
Query: 78 VISSCSELATLGQGQQIHAEVVKAG----------------------------------- 102
++ C A G G+ IHA VKAG
Sbjct: 29 LLQRCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYAGPAAGGGGGFREARRLFDE 88
Query: 103 ---ASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAIN 159
A +V +SL+S+Y++ G L D+ F E D V W+ M+ G+ EAI
Sbjct: 89 IPAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIK 148
Query: 160 LFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC----- 214
+F M T ++L +C+ + G + +VK L +C
Sbjct: 149 MFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVK-------LGLSSCVPVAN 201
Query: 215 -VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
V+++ G+CG + A A+ MP ++ + W ++S
Sbjct: 202 SVLNMYGKCGDAETARAVFERMPERSVS-SWNAMVS 236
>gi|5262797|emb|CAB45902.1| putative protein (fragment) [Arabidopsis thaliana]
gi|7268904|emb|CAB79107.1| putative protein (fragment) [Arabidopsis thaliana]
Length = 1495
Score = 324 bits (830), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 168/430 (39%), Positives = 261/430 (60%), Gaps = 15/430 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF + +SL H+Y G + KV MP ++++AW ++I G A+NG E+ L Y
Sbjct: 151 GFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALY 210
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G +PD T VS++S+C+++ L G+++H ++K G + ++ + L+ +Y+RC
Sbjct: 211 TEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARC 270
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE-FEANDVTFVSL 179
G ++++ F E + V W+S+I +G G+EAI LF+ ME E ++TFV +
Sbjct: 271 GRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGI 330
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
LYACSHCG+ ++G E+F M ++Y+ +PR+EH+ C+VDLL R G + +A I++MP++
Sbjct: 331 LYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQP 390
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
N +IW+TLL AC H +D+A +IL + P + YVLLSN++AS +RW V + R+
Sbjct: 391 NVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRK 450
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M VKK PG S +E+ N+VH+F MGDKSHP+S I L+E+T ++ GYVP
Sbjct: 451 QMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISN 510
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAF---AEHTRGLIVM-----------LPFKYISEIKN 405
D++ EEKE + +HSEK+AIAF + R I + L K +S++ N
Sbjct: 511 VYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYN 570
Query: 406 REIIVRDASR 415
REI+VRD SR
Sbjct: 571 REIVVRDRSR 580
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 114/217 (52%), Gaps = 4/217 (1%)
Query: 33 PIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF-RPDKITFVSVISSCSELATLGQG 91
PI NV W TLI G A+ G + Y MR+ G PD T+ +I + + +A + G
Sbjct: 82 PI-NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLG 140
Query: 92 QQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFH 151
+ IH+ V+++G + V +SL+ +Y+ CG + + K F + D+V W+S+I + +
Sbjct: 141 ETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAEN 200
Query: 152 GKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEH 211
GK EEA+ L+ +M K + + T VSLL AC+ G G M+K + L
Sbjct: 201 GKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTR-NLHS 259
Query: 212 YTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
++DL RCG ++EA L M V N++ W +L+
Sbjct: 260 SNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLI 295
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 324 bits (830), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 162/435 (37%), Positives = 245/435 (56%), Gaps = 14/435 (3%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L MY K L + + + +R++ W +I AQ E L+ + M+ G +
Sbjct: 555 TALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVK 614
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P++ T +S CS LA+L GQQ+H+ V K+G D+ V S+L+ MY++CGC++++
Sbjct: 615 PNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEAL 674
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F D + W+++I Y +G+G +A+ F M + + VTF +L ACSH GL
Sbjct: 675 FEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLV 734
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
E+G E F+ M + + P ++H C+VD+LGR G DE I+ M + NA+IW+T+L
Sbjct: 735 EEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLG 794
Query: 250 ACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKE 309
A K H + + + A ++ + P++ + Y+LLSNI A+ RW V R M + VKKE
Sbjct: 795 ASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKE 854
Query: 310 PGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEK 369
PG SW+E QVH F D SHP+ EI L L+EL E+ YVP T +H++ EK
Sbjct: 855 PGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLDELDRELASIQYVPKTEYVLHNVGETEK 914
Query: 370 EYNLKHHSEKLAIAFA---EHTRGLIVMLP-----------FKYISEIKNREIIVRDASR 415
+ NL+ HSE+LA+ FA + I + K+IS I N+EI+VRD R
Sbjct: 915 KENLRFHSERLALGFALISTSSEKKIRIFKNLRICRDCHDVMKHISSITNQEIVVRDVRR 974
Query: 416 FHHFRNGKCSCGDYW 430
FHHF+NG CSC D+W
Sbjct: 975 FHHFKNGACSCNDFW 989
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 132/248 (53%), Gaps = 2/248 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE D+ ++L MYMK+G + +G K+ M R++I+W ++G G+ + L +
Sbjct: 445 GFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIF 504
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M GF P+ TF+S++ SCS L + G+Q+HA ++K + V ++LI MY++C
Sbjct: 505 YHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKC 564
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
L+D+ F D+ W+ +I Y +GE+A+N F QM+Q+ + N+ T L
Sbjct: 565 MYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCL 624
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
CS E G + MV K + + +VD+ +CG ++EA AL + ++ +
Sbjct: 625 SGCSSLASLEGGQQLHS-MVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEAL-IRRD 682
Query: 241 AIIWKTLL 248
I W T++
Sbjct: 683 TIAWNTII 690
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 119/250 (47%), Gaps = 2/250 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G LDL GS+L +Y K G + K+ MP +N + W L+ G AQ G VL +
Sbjct: 243 GLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLF 302
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M + + ++ T +V+ C+ L QGQ IH+ ++K G + + L+ MYS+C
Sbjct: 303 CSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKC 362
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G D++ F + D+V+WS++I G+ EE+I LF M + N T SLL
Sbjct: 363 GLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLL 422
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
A ++ G + G + V KY + + +V + + G + + L +M V +
Sbjct: 423 SAATNTGNLQYG-QSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESM-VDRD 480
Query: 241 AIIWKTLLSA 250
I W LS
Sbjct: 481 LISWNAYLSG 490
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 120/242 (49%), Gaps = 6/242 (2%)
Query: 11 SLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRP 70
SL ++Y K V+ MP R+V++W LI G G A D + + M+ G P
Sbjct: 152 SLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMP 211
Query: 71 DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTF 130
++ T + + +CS L G+Q+HA+ K G LD+ V S+L+ +Y++CG ++ + K F
Sbjct: 212 NEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMF 271
Query: 131 LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKE 190
+ + V W+ ++ Y G + LF M + + + N+ T ++L C++ +
Sbjct: 272 IGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLK 331
Query: 191 KGMEFFDLMVK-KYRRKPRLEHYTC-VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
+G L++K Y E C +VD+ +CG +A + + + K + ++W L+
Sbjct: 332 QGQVIHSLIIKCGYEGN---EFIGCGLVDMYSKCGLAIDAIGVFKTIK-KPDIVVWSALI 387
Query: 249 SA 250
+
Sbjct: 388 TC 389
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 121/249 (48%), Gaps = 2/249 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+E + G L MY K G ++ V + + +++ W LI Q G +E+ + +
Sbjct: 344 GYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLF 403
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+LMR+ P++ T S++S+ + L GQ IHA V K G DV V ++L++MY +
Sbjct: 404 HLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKN 463
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
GC+ D K + D++ W++ ++ G + + +F M ++ F N TF+S+L
Sbjct: 464 GCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISIL 523
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
+CS G + ++K T ++D+ +C YL++A + V+ +
Sbjct: 524 GSCSCLFDVHYGRQVHAHIIKNQLDDNNFV-CTALIDMYAKCMYLEDADVAFNRLSVR-D 581
Query: 241 AIIWKTLLS 249
W +++
Sbjct: 582 LFTWTVIIT 590
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 85/170 (50%), Gaps = 6/170 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ GS+L MY K G + E E + + R+ IAW T+I G AQNG L + +M
Sbjct: 651 DMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMML 710
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSRCGCL 123
G PD +TF ++S+CS + +G++ + + G S V + ++ + R G
Sbjct: 711 DEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKF 770
Query: 124 DDSVKTFLECEYS-DVVLWSSMIAAYGFHGK---GEEAIN-LFEQMEQKE 168
D+ + + S + ++W +++ A H GE+A N LFE ++E
Sbjct: 771 DELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEE 820
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 89/178 (50%), Gaps = 6/178 (3%)
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
+ S++ C+ +LG + IH +VK + D + SL+++Y++C + +
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGME 194
DVV W+++I G ++I LF++M+ + N+ T + L ACS C + G +
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ 234
Query: 195 FFDLMVKKYRRKPRLEHY--TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+ + ++ L+ + + +VDL +CG ++ A+ + MP + N + W LL+
Sbjct: 235 ---MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMP-EQNDVTWNVLLNG 288
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 324 bits (830), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 165/440 (37%), Positives = 257/440 (58%), Gaps = 26/440 (5%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+SL MY K + + + NV W +I G AQNG ++ L+ + +M+ G +
Sbjct: 386 NSLISMYSKCKRVDIAASIFNNLEKTNV-TWNAMILGYAQNGCVKEALNLFCMMQSQGIK 444
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
D T V VI++ ++ + Q + IH V+A +V V ++L+ MY++CG + + K
Sbjct: 445 LDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKL 504
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F + V+ W++MI YG HG G+E ++LF +M++ + ND+TF+S++ ACSH G
Sbjct: 505 FDMMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACSHSGFV 564
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
E+G+ F M + Y +P ++HY+ +VDLLGR G LD+A I+ MP+K + +L
Sbjct: 565 EEGLLLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAWNFIQEMPIKPGISVLGAMLG 624
Query: 250 ACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKE 309
ACK HK+ ++ + A+++ ++P + +VLL+NI+AS W V++ R AM ++ + K
Sbjct: 625 ACKIHKNVELGEKAAQKLFKLDPDEGGYHVLLANIYASNSMWDKVAKVRTAMEDKGLHKT 684
Query: 310 PGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEK 369
PG SW+E++N++H F G +HP S +I +LE L E+K GYVPD + +HD++ + K
Sbjct: 685 PGCSWVELRNEIHTFYSGSTNHPESKKIYAFLETLGDEIKAAGYVPDPDS-IHDVEEDVK 743
Query: 370 EYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREIIV 410
+ L HSE+LAIAF GL+ P KYIS + REIIV
Sbjct: 744 KQLLSSHSERLAIAF-----GLLNTSPGTTLHIRKNLRVCGDCHDTTKYISLVTGREIIV 798
Query: 411 RDASRFHHFRNGKCSCGDYW 430
RD RFHHF+NG CSCGDYW
Sbjct: 799 RDLRRFHHFKNGSCSCGDYW 818
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 125/248 (50%), Gaps = 3/248 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE +L +++ +Y K + K+ M +++++W TL+AG AQNG A+ L
Sbjct: 175 GFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLV 234
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G +PD +T VS++ + +++ L G+ IH ++G V V ++L+ MY +C
Sbjct: 235 LQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKC 294
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + F VV W++MI +G+ EEA F +M + VT + +L
Sbjct: 295 GSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVL 354
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC++ G E+G F ++ K + + ++ + +C +D AA++ N+ K N
Sbjct: 355 LACANLGDLERGW-FVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLE-KTN 412
Query: 241 AIIWKTLL 248
+ W ++
Sbjct: 413 -VTWNAMI 419
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 124/264 (46%), Gaps = 10/264 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF + + + + ++ K GS E +V + ++ + + ++ G A+N D L +
Sbjct: 74 GFYNEHLFQTKVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGDALCFF 133
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M R + ++ C E L +G++IH ++ G ++ V+++++S+Y++C
Sbjct: 134 LRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKC 193
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
+D++ K F ++ D+V W++++A Y +G + A+ L QM++ + + VT VS+L
Sbjct: 194 RQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSIL 253
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV----VDLLGRCGYLDEAAALIRNMP 236
A + G + Y + E V +D+ +CG A + + M
Sbjct: 254 PAVADMKALRIGRS-----IHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMR 308
Query: 237 VKANAIIWKTLLSACKTHKSTDMA 260
K + W T++ C + ++ A
Sbjct: 309 SKT-VVSWNTMIDGCAQNGESEEA 331
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 84/170 (49%), Gaps = 10/170 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
++ ++L MY K G++ K+ +M R+VI W +I G +G+ ++ LD +N M+
Sbjct: 481 NVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQ 540
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIH---AEVVKAGASLDVGVISSLISMYSRCG 121
+P+ ITF+SVIS+CS + +G + E ++D S+++ + R G
Sbjct: 541 KGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMD--HYSAMVDLLGRAG 598
Query: 122 CLDDSVKTFLECEYSD-VVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFE 170
LDD+ E + + +M+ A H + + L E+ QK F+
Sbjct: 599 QLDDAWNFIQEMPIKPGISVLGAMLGACKIH----KNVELGEKAAQKLFK 644
>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
Length = 903
Score = 324 bits (830), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 177/448 (39%), Positives = 268/448 (59%), Gaps = 19/448 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRN---VIAWITLIAGKAQNGLAEDVL 57
G+ + G+++ MY G++ E + + + V++W +I+ +Q+G + L
Sbjct: 457 GYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRAL 516
Query: 58 DQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMY 117
+ M + G P++IT V+V+ +C+ A L +G +H + +G +V V ++L SMY
Sbjct: 517 GFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGVIVHDHLRHSGMESNVFVATALASMY 576
Query: 118 SRCGCLDDSVKTFLECEYS-DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
RCG L+ + + F + DVV++++MIAAY +G EA+ LF +M+Q+ ++ +F
Sbjct: 577 GRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSF 636
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
VS+L ACSH GL ++G E F M + Y P +HY C VD+LGR G+L +A LIR M
Sbjct: 637 VSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMD 696
Query: 237 VKANAIIWKTLLSACKTHKSTDMAGRIAEEILG-VNPQDAAPYVLLSNIHASAKRWQGVS 295
VK ++WKTLL AC+ ++ D GR+A ++ ++P D + YV+LSNI A A +W +
Sbjct: 697 VKPTVLVWKTLLGACRKYRDVDR-GRLANSMVRELDPGDESAYVVLSNILAGAGKWDEAA 755
Query: 296 EFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVP 355
E R M R ++K+ G SW+EIK++VH+F GD+SHPRS EI LE L +E++ GYVP
Sbjct: 756 EVRTEMESRGLRKQAGKSWIEIKSRVHEFVAGDRSHPRSEEIYRELERLHAEIREIGYVP 815
Query: 356 DTGADMHDMDSEEKEYNLKHHSEKLAIAF---AEHTRGLIVMLPF----------KYISE 402
DT + +D EKE L HSE+LAIA + T + VM K+IS+
Sbjct: 816 DTRLVLRKVDEAEKERLLCQHSERLAIALGVMSSSTDTVRVMKNLRVCEDCHNATKFISK 875
Query: 403 IKNREIIVRDASRFHHFRNGKCSCGDYW 430
I N+EI+VRD RFHHF +G CSCGDYW
Sbjct: 876 IVNKEIVVRDTHRFHHFVDGSCSCGDYW 903
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 139/261 (53%), Gaps = 17/261 (6%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + D+V G++L MY + GS E + +P N ++W T+IAG +Q G + L+ +
Sbjct: 353 GLDRDIVLGNALLDMYTRCGSPEEARHLFEGIP-GNAVSWNTMIAGSSQKGQMKRALELF 411
Query: 61 NLMRMVGFRPDKITFV----SVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISM 116
M++ G P + T++ +V S+ E + +G+++H+ +V G + + + ++++ M
Sbjct: 412 QRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKM 471
Query: 117 YSRCGCLDDSVKTFLEC---EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEAND 173
Y+ CG +D++ +F + DVV W+++I++ HG G+ A+ F +M+ N
Sbjct: 472 YASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQ 531
Query: 174 VTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEH----YTCVVDLLGRCGYLDEAA 229
+T V++L AC+ +G ++V + R +E T + + GRCG L+ A
Sbjct: 532 ITCVAVLDACAGAAALTEG-----VIVHDHLRHSGMESNVFVATALASMYGRCGSLESAR 586
Query: 230 ALIRNMPVKANAIIWKTLLSA 250
+ + V+ + +I+ +++A
Sbjct: 587 EIFEKVAVERDVVIFNAMIAA 607
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 145/309 (46%), Gaps = 28/309 (9%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E V + L H+Y G + + M R++++W IA AQ+G + L+ +
Sbjct: 158 GLEGKSVLANLLLHIYGSCGCVASAMLLFERME-RDLVSWNAAIAANAQSGDLDMALELF 216
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M++ G RP +IT V +S C A + Q + IH+ V ++G + V ++L S Y+R
Sbjct: 217 QRMQLEGVRPARITLVITLSVC---AKIRQARAIHSIVRESGLEQTLVVSTALASAYARL 273
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G LD + + F DVV W++M+ AY HG EA LF +M + + VT V+
Sbjct: 274 GHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTLVNAS 333
Query: 181 YACS--------HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALI 232
CS H EKG++ D+++ ++D+ RCG +EA L
Sbjct: 334 TGCSSLRFGRMIHACALEKGLD-RDIVLG-----------NALLDMYTRCGSPEEARHLF 381
Query: 233 RNMPVKANAIIWKTLLSACKTHKSTDMAGRIAE--EILGVNPQDAAPYVLLSNIHASAKR 290
+P NA+ W T+++ A + + ++ G+ P A LL + ++ +
Sbjct: 382 EGIP--GNAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEE 439
Query: 291 WQGVSEFRE 299
+ ++E R+
Sbjct: 440 ARAMAEGRK 448
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 136/274 (49%), Gaps = 10/274 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E +L G+ L +Y+K SL + E+V + +R+ +W T+I ++G A+ + +
Sbjct: 59 GLEEEL--GNHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITAYTEHGQAKRAIWMF 116
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M+ G R D +TF++V+ +C+ L L QG+ IHA +V++G + + L+ +Y C
Sbjct: 117 HRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLEGKSVLANLLLHIYGSC 176
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
GC+ ++ F E D+V W++ IAA G + A+ LF++M+ + +T V L
Sbjct: 177 GCVASAMLLFERME-RDLVSWNAAIAANAQSGDLDMALELFQRMQLEGVRPARITLVITL 235
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
C+ K + +V++ + L T + R G+LD+A + + + +
Sbjct: 236 SVCA----KIRQARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVF-DRAAERD 290
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNP 272
+ W +L A H A + +L G+ P
Sbjct: 291 VVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPP 324
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 103/214 (48%), Gaps = 15/214 (7%)
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
V ++ + + L QG++IHA +V G ++G + L+ +Y +C L D + F E
Sbjct: 32 LVRLLRAAGDDRLLSQGRRIHARIVSLGLEEELG--NHLLRLYLKCESLGDVEEVFSRLE 89
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGME 194
D W+++I AY HG+ + AI +F +M+Q+ + VTF+++L AC+ G +G
Sbjct: 90 VRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRS 149
Query: 195 FFDLMVKKYRRKPRLEHYTCVVDLL----GRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+V+ LE + + +LL G CG + A L M + + + W ++A
Sbjct: 150 IHAWIVESG-----LEGKSVLANLLLHIYGSCGCVASAMLLFERM--ERDLVSWNAAIAA 202
Query: 251 CKTHKSTDMAGRIAE--EILGVNPQDAAPYVLLS 282
DMA + + ++ GV P + LS
Sbjct: 203 NAQSGDLDMALELFQRMQLEGVRPARITLVITLS 236
>gi|356498282|ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Glycine max]
Length = 609
Score = 324 bits (830), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 168/440 (38%), Positives = 251/440 (57%), Gaps = 25/440 (5%)
Query: 11 SLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRP 70
+L +MY + +V + V+A+ +I A+N + L + ++ G +P
Sbjct: 175 TLINMYTACNDVDAARRVFDKIGEPCVVAYNAIITSCARNSRPNEALALFRELQESGLKP 234
Query: 71 DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTF 130
+T + +SSC+ L L G+ IH V K G V V ++LI MY++CG LDD+V F
Sbjct: 235 TDVTMLVALSSCALLGALDLGRWIHEYVKKNGFDQYVKVNTALIDMYAKCGSLDDAVSVF 294
Query: 131 LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKE 190
+ D WS+MI AY HG G +AI++ +M++ + + +++TF+ +LYACSH GL E
Sbjct: 295 KDMPRRDTQAWSAMIVAYATHGHGSQAISMLREMKKAKVQPDEITFLGILYACSHTGLVE 354
Query: 191 KGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+G E+F M +Y P ++HY C++DLLGR G L+EA I +P+K I+W+TLLS+
Sbjct: 355 EGYEYFHSMTHEYGIVPSIKHYGCMIDLLGRAGRLEEACKFIDELPIKPTPILWRTLLSS 414
Query: 251 CKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEP 310
C +H + +MA + + I ++ YV+LSN+ A RW V+ R+ M ++ K P
Sbjct: 415 CSSHGNVEMAKLVIQRIFELDDSHGGDYVILSNLCARNGRWDDVNHLRKMMVDKGALKVP 474
Query: 311 GVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMH-DMDSEEK 369
G S +E+ N VH+F GD H S + L+EL E+KL GYVPDT + D++ EEK
Sbjct: 475 GCSSIEVNNVVHEFFSGDGVHSTSTILHHALDELVKELKLAGYVPDTSLVFYADIEDEEK 534
Query: 370 EYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREIIV 410
E L++HSEKLAI + GL+ P K+IS I R+II+
Sbjct: 535 EIVLRYHSEKLAITY-----GLLNTPPGTTIRVVKNLRVCVDCHNAAKFISLIFGRQIIL 589
Query: 411 RDASRFHHFRNGKCSCGDYW 430
RD RFHHF++GKCSCGDYW
Sbjct: 590 RDVQRFHHFKDGKCSCGDYW 609
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 123/242 (50%), Gaps = 16/242 (6%)
Query: 20 GSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV---GFRPDKITFV 76
S+ ++ +P +++ + T+ G A+ +D L L V G PD TF
Sbjct: 83 ASMDHAHRMFDKIPQPDIVLFNTMARGYAR---FDDPLRAILLCSQVLCSGLLPDDYTFS 139
Query: 77 SVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYS 136
S++ +C+ L L +G+Q+H VK G ++ V +LI+MY+ C +D + + F +
Sbjct: 140 SLLKACARLKALEEGKQLHCLAVKLGVGDNMYVCPTLINMYTACNDVDAARRVFDKIGEP 199
Query: 137 DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFF 196
VV ++++I + + + EA+ LF ++++ + DVT + L +C+ G + G
Sbjct: 200 CVVAYNAIITSCARNSRPNEALALFRELQESGLKPTDVTMLVALSSCALLGALDLGR--- 256
Query: 197 DLMVKKYRRKPRLEHY----TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACK 252
+ +Y +K + Y T ++D+ +CG LD+A ++ ++MP + + W ++ A
Sbjct: 257 --WIHEYVKKNGFDQYVKVNTALIDMYAKCGSLDDAVSVFKDMP-RRDTQAWSAMIVAYA 313
Query: 253 TH 254
TH
Sbjct: 314 TH 315
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 9/207 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ + ++L MY K GSL + V + MP R+ AW +I A +G +
Sbjct: 266 GFDQYVKVNTALIDMYAKCGSLDDAVSVFKDMPRRDTQAWSAMIVAYATHGHGSQAISML 325
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQG-QQIHAEVVKAGASLDVGVISSLISMYSR 119
M+ +PD+ITF+ ++ +CS + +G + H+ + G + +I + R
Sbjct: 326 REMKKAKVQPDEITFLGILYACSHTGLVEEGYEYFHSMTHEYGIVPSIKHYGCMIDLLGR 385
Query: 120 CGCLDDSVKTFLECEYSDV-VLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDV---T 175
G L+++ K E +LW +++++ HG E A + + Q+ FE +D
Sbjct: 386 AGRLEEACKFIDELPIKPTPILWRTLLSSCSSHGNVEMA----KLVIQRIFELDDSHGGD 441
Query: 176 FVSLLYACSHCGLKEKGMEFFDLMVKK 202
+V L C+ G + +MV K
Sbjct: 442 YVILSNLCARNGRWDDVNHLRKMMVDK 468
>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
Length = 818
Score = 324 bits (830), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 171/481 (35%), Positives = 275/481 (57%), Gaps = 51/481 (10%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAED----- 55
G + ++ ++L +MY K GSL E KV M R+ +AW TLI A NG +D
Sbjct: 338 GLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKAR 397
Query: 56 -VLDQ--------YNLM---------------------RMVGFRPDKITFVSVISSCSEL 85
V D+ +N M G +PD +TF++V+ +C+ L
Sbjct: 398 KVFDRLGSRDTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASL 457
Query: 86 ATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMI 145
L + + +HA++ ++ +V V ++LI+MY+RCG L+++ + F + VV W++M+
Sbjct: 458 GRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMV 517
Query: 146 AAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRR 205
AA+ +G+ EA++LF++M+ + + +DVT+ S+L+ C+H G E+G +F M + +
Sbjct: 518 AAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGL 577
Query: 206 KPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAE 265
P +H+ +VDLLGR G L +A L+ +MP + + + W T L+AC+ H ++ AE
Sbjct: 578 APTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAE 637
Query: 266 EILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFT 325
+ ++P APY+ +SNI+A+ W+ V+ R+ M ER +KK PG+S++E+ ++H+F+
Sbjct: 638 RVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFS 697
Query: 326 MGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFA 385
G K HPR+ EI L L M+ GYVPDT A +HD+ EKE L +HSEK+AIAF
Sbjct: 698 SGGKYHPRTDEICEELTRLHGLMRAAGYVPDTKAVLHDVSEGEKETMLLYHSEKMAIAFG 757
Query: 386 -EHTRG------LIVML--------PFKYISEIKNREIIVRDASRFHHF-RNGKCSCGDY 429
+RG ++ L K+I+ I R+II+RD +RFH F +GKCSCGDY
Sbjct: 758 LVSSRGSGEPIRVVKNLRVCSDCHTATKFIARIAGRDIILRDCNRFHRFSSDGKCSCGDY 817
Query: 430 W 430
W
Sbjct: 818 W 818
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 136/255 (53%), Gaps = 10/255 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ DLV ++L +MY K GS E +V M R++++W +I QNG + L+ Y
Sbjct: 237 GFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELY 296
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M GF+ K TFVS++ +CS + L QG+ +H+ +++ G +V V ++L++MY++C
Sbjct: 297 QKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKC 356
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEE---AINLFEQMEQKEFEANDVTFV 177
G L+++ K F + D V WS++I AY +G G++ A +F+++ ++ + +
Sbjct: 357 GSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRD----TICWN 412
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAAL---IRN 234
+++ G M+ F M KP + V++ G L E AL I
Sbjct: 413 AMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISE 472
Query: 235 MPVKANAIIWKTLLS 249
+++N ++ TL++
Sbjct: 473 SELESNVVVTNTLIN 487
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 132/242 (54%), Gaps = 3/242 (1%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
++L MY + GS+ + +++ + + R+ +W +I +Q+G L + M+
Sbjct: 145 ANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMK-CDM 203
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
+P+ T+++VIS S L +G++IHAE+V G D+ V ++LI+MY +CG ++ +
Sbjct: 204 KPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVVATALINMYGKCGSSHEARE 263
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F + + D+V W+ MI Y +G EA+ L+++++ + F+ TFVS+L ACS
Sbjct: 264 VFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKA 323
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
+G ++++ + T +V++ +CG L+EA + M + +A+ W TL+
Sbjct: 324 LAQGRLVHSHILER-GLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNR-DAVAWSTLI 381
Query: 249 SA 250
A
Sbjct: 382 GA 383
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 129/249 (51%), Gaps = 8/249 (3%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIR--NVIAWITLIAGKAQNGLAEDVLDQ 59
FE D + G++L MY K SLV+ V M R NV++W +IA AQNG + + L
Sbjct: 38 FERDTMVGNALISMYGKCDSLVDARSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVL 97
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
Y M + G D +TFVSV+ +CS LA QG++IH V +G + ++L++MY+R
Sbjct: 98 YWRMNLQGLGTDHVTFVSVLGACSSLA---QGREIHNRVFYSGLDSFQSLANALVTMYAR 154
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G + D+ + F + D W+++I A+ G A+ +F++M + + + N T++++
Sbjct: 155 FGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEM-KCDMKPNSTTYINV 213
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
+ S + +G + +V L T ++++ G+CG EA + M K
Sbjct: 214 ISGFSTPEVLPEGRKIHAEIVAN-GFDSDLVVATALINMYGKCGSSHEAREVFDKMK-KR 271
Query: 240 NAIIWKTLL 248
+ + W ++
Sbjct: 272 DMVSWNVMI 280
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 70/118 (59%), Gaps = 2/118 (1%)
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
+PD +TF++V+ SCS + +G+ +H + + D V ++LISMY +C L D+
Sbjct: 4 QPDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63
Query: 129 TF--LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
F ++ +VV W++MIAAY +G EA+ L+ +M + + VTFVS+L ACS
Sbjct: 64 VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACS 121
>gi|224112267|ref|XP_002316137.1| predicted protein [Populus trichocarpa]
gi|222865177|gb|EEF02308.1| predicted protein [Populus trichocarpa]
Length = 601
Score = 324 bits (830), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 168/440 (38%), Positives = 256/440 (58%), Gaps = 25/440 (5%)
Query: 11 SLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRP 70
+L +MY + ++V + V+++ +I G A++ + L + ++ +P
Sbjct: 167 TLINMYAGCNDVDGAQRVFDEILEPCVVSYNAIITGYARSSRPNEALSLFRQLQARKLKP 226
Query: 71 DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTF 130
+ +T +SV+SSC+ L L G+ IH V K G V V ++LI MY++CG LD ++ F
Sbjct: 227 NDVTVLSVLSSCALLGALDLGKWIHEYVKKNGLDKYVKVNTALIDMYAKCGSLDGAISVF 286
Query: 131 LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKE 190
D WS+MI AY HG+G++ +++FE+M + + + +++TF+ LLYACSH GL +
Sbjct: 287 ESMSVRDTQAWSAMIVAYAMHGQGQDVMSMFEEMARAKVQPDEITFLGLLYACSHTGLVD 346
Query: 191 KGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+G +F M + Y P ++HY C+VDLLGR G L EA I +P+K I+W+TLLS+
Sbjct: 347 EGFRYFYSMSEVYGIIPGIKHYGCMVDLLGRAGLLHEAYKFIDELPIKPTPILWRTLLSS 406
Query: 251 CKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEP 310
C +H + ++A ++ +IL ++ YV+LSN+ A A +W+ V R+ M + K P
Sbjct: 407 CSSHGNLELAKQVMNQILELDDSHGGDYVILSNLCARAGKWEDVDTLRKLMIHKGAVKIP 466
Query: 311 GVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMH-DMDSEEK 369
G S +E+ N VH+F GD H S + L+EL E+K GYVPDT +H DM+ EEK
Sbjct: 467 GCSSIEVDNVVHEFFSGDGVHYVSTALHRALDELVKELKSVGYVPDTSLVVHPDMEDEEK 526
Query: 370 EYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREIIV 410
E L++HSEKLAI+F GL+ P K IS + +REII+
Sbjct: 527 EITLRYHSEKLAISF-----GLLNTPPGTTIRVVKNLRVCGDCHSAAKLISSLIDREIIL 581
Query: 411 RDASRFHHFRNGKCSCGDYW 430
RD RFHHF++GKCSCGDYW
Sbjct: 582 RDVQRFHHFKDGKCSCGDYW 601
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 120/240 (50%), Gaps = 10/240 (4%)
Query: 19 SGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSV 78
+ S+ ++ +P +++ + ++ G +++ + + PD TF S+
Sbjct: 74 TASMDYAHQLFEAIPQPDIVLFNSMFRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSL 133
Query: 79 ISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDV 138
+ +C QG+Q+H +K G + + V +LI+MY+ C +D + + F E V
Sbjct: 134 LKACVVAKAFQQGKQLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCV 193
Query: 139 VLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDL 198
V ++++I Y + EA++LF Q++ ++ + NDVT +S+L +C+ G + G
Sbjct: 194 VSYNAIITGYARSSRPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLGALDLGK----- 248
Query: 199 MVKKYRRKPRLEHY----TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
+ +Y +K L+ Y T ++D+ +CG LD A ++ +M V+ + W ++ A H
Sbjct: 249 WIHEYVKKNGLDKYVKVNTALIDMYAKCGSLDGAISVFESMSVR-DTQAWSAMIVAYAMH 307
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 90/205 (43%), Gaps = 5/205 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + + ++L MY K GSL V M +R+ AW +I A +G +DV+ +
Sbjct: 258 GLDKYVKVNTALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSMF 317
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSR 119
M +PD+ITF+ ++ +CS + +G + + + G + ++ + R
Sbjct: 318 EEMARAKVQPDEITFLGLLYACSHTGLVDEGFRYFYSMSEVYGIIPGIKHYGCMVDLLGR 377
Query: 120 CGCLDDSVKTFLECEYSDV-VLWSSMIAAYGFHGKGEEAINLFEQ-MEQKEFEANDVTFV 177
G L ++ K E +LW +++++ HG E A + Q +E + D +
Sbjct: 378 AGLLHEAYKFIDELPIKPTPILWRTLLSSCSSHGNLELAKQVMNQILELDDSHGGDYVIL 437
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKK 202
S L C+ G E LM+ K
Sbjct: 438 SNL--CARAGKWEDVDTLRKLMIHK 460
>gi|297794157|ref|XP_002864963.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310798|gb|EFH41222.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 720
Score = 323 bits (829), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 181/448 (40%), Positives = 251/448 (56%), Gaps = 24/448 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE L + +SL MY++ + + V + + N + W +LI+G QNG E L ++
Sbjct: 279 GFESALASQTSLLTMYLRCSLVDDSLLVFKCIKYPNQVTWTSLISGLVQNGREETALIEF 338
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M +P+ T S + CS LA +G+Q+H V K G D S LI +Y +C
Sbjct: 339 RKMMRDSVKPNSFTLSSALRGCSNLAMFEEGRQVHGIVSKYGFDRDKYAGSGLIELYGKC 398
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
GC D + F DV+ ++MI +Y +G G EA+ LFE+M + NDVT +S+L
Sbjct: 399 GCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALELFERMINLGLQPNDVTVLSVL 458
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRL----EHYTCVVDLLGRCGYLDEAAALIRNMP 236
AC++ GL E+G E FD RK ++ +HY C+VD+LGR G L+EA LI +
Sbjct: 459 LACNNSGLVEEGCELFDSF-----RKDKIMLTNDHYACMVDMLGRAGRLEEAEMLITEV- 512
Query: 237 VKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSE 296
+ ++W+TLLSACK H+ +MA RI +IL + P D +LLSN++AS +W+ V E
Sbjct: 513 TNPDLVLWRTLLSACKVHRKVEMAERITRKILEIAPGDEGTLILLSNLYASTGKWKRVIE 572
Query: 297 FREAMRERNVKKEPGVSWLEIKNQVHQFTMGDK-SHPRSMEIDLYLEELTSEMKLRGYVP 355
+ M+E +KK P +SW+EI + H F GD SHP S +I LEEL + K GYV
Sbjct: 573 MKSKMKEMKLKKNPAMSWVEIDKETHTFMAGDLFSHPNSEQILENLEELIKKAKDLGYVE 632
Query: 356 DTGADMHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVMLP-----------FKYISE 402
D DM+ KE +L HSEKLAIAFA + G I +L K +S
Sbjct: 633 DKSCVFQDMEETAKERSLHQHSEKLAIAFAVWRNVGGSIRILKNLRVCVDCHSWIKIVSR 692
Query: 403 IKNREIIVRDASRFHHFRNGKCSCGDYW 430
I REII RD+ RFHHFR+G CSCGDYW
Sbjct: 693 IIKREIICRDSKRFHHFRDGSCSCGDYW 720
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 148/300 (49%), Gaps = 5/300 (1%)
Query: 1 GFEL-DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQ 59
G E+ ++ GS+L MY+K G E + V+ + ++V+ LI G +Q G + +
Sbjct: 177 GLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKA 236
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ M + +P++ T+ SV+ SC L +G G+ IH +VK+G + +SL++MY R
Sbjct: 237 FQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLR 296
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
C +DDS+ F +Y + V W+S+I+ +G+ E A+ F +M + + N T S
Sbjct: 297 CSLVDDSLLVFKCIKYPNQVTWTSLISGLVQNGREETALIEFRKMMRDSVKPNSFTLSSA 356
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L CS+ + E+G + + V KY + +++L G+CG D A L+ + +
Sbjct: 357 LRGCSNLAMFEEGRQVHGI-VSKYGFDRDKYAGSGLIELYGKCGCSD-MARLVFDTLSEV 414
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLSNIHASAKRWQGVSEF 297
+ I T++ + + A + E + LG+ P D +L + S +G F
Sbjct: 415 DVISLNTMIYSYAQNGFGREALELFERMINLGLQPNDVTVLSVLLACNNSGLVEEGCELF 474
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 125/251 (49%), Gaps = 4/251 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF ++L +GS L +K G + ++ MP R+++ W ++IA ++ +++ ++ Y
Sbjct: 77 GFPVEL-SGSKLVDASLKCGEIGYARQLFDGMPERHIVTWNSIIAYYIKHRRSKEAVEMY 135
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASL-DVGVISSLISMYSR 119
LM PD+ T SV + S+L+ + Q+ H V G + +V V S+L+ MY +
Sbjct: 136 RLMISNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVK 195
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G ++ E DVVL +++I Y G+ EA+ F+ M ++ + N+ T+ S+
Sbjct: 196 FGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASV 255
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L +C + G LMVK + L T ++ + RC +D++ + + +
Sbjct: 256 LISCGNLKDIGNGKLIHGLMVKS-GFESALASQTSLLTMYLRCSLVDDSLLVFKCIKY-P 313
Query: 240 NAIIWKTLLSA 250
N + W +L+S
Sbjct: 314 NQVTWTSLISG 324
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 323 bits (829), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 158/414 (38%), Positives = 245/414 (59%), Gaps = 24/414 (5%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
NV++W ++IA +QNG + L+ + M++ G +P+ +T ++ +C +A L G+ H
Sbjct: 350 NVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAH 409
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGE 155
++ G S DV V S+LI MY++CG + S F ++V W+++IA Y HGK +
Sbjct: 410 CFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAK 469
Query: 156 EAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV 215
EA+ +F+ M++ + + ++F +L ACS GL E+G +F+ M KY + R+EHY C+
Sbjct: 470 EAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACM 529
Query: 216 VDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDA 275
V LL R G L++A A+IR MPV +A +W LLS+C+ H + + AE++ + P +
Sbjct: 530 VTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNP 589
Query: 276 APYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSM 335
Y+LLSNI+AS W V+ R+ M+ + ++K PG SW+E+KN+VH GDKSHP+
Sbjct: 590 GNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMT 649
Query: 336 EIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVML 395
+I L++L+ EMK GY P+ + D++ ++KE L HSEKLA+ F GL+
Sbjct: 650 QIIEKLDKLSMEMKKLGYFPEINFVLQDVEEQDKEQILCGHSEKLAVVF-----GLLNTP 704
Query: 396 P-------------------FKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
P K+IS + REI VRD +RFHHF+ G CSCGDYW
Sbjct: 705 PGYPLQVIKNLRICGDCHVVIKFISSFERREIFVRDTNRFHHFKEGACSCGDYW 758
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 128/296 (43%), Gaps = 49/296 (16%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIR----NVIAWITLIAGKAQNGLAEDVL 57
FE D+V+ S+L Y + G + E +++ M N+I+W +IAG +GL + +
Sbjct: 176 FEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAV 235
Query: 58 DQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMY 117
+ M + GF PD T SV+ + +L L G IH V+K G D V S+LI MY
Sbjct: 236 LMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMY 295
Query: 118 SRCGCLDDSVKTFLECEYSD-----------------------------------VVLWS 142
+C C + + F + ++ D VV W+
Sbjct: 296 GKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWT 355
Query: 143 SMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCG--LKEKGMEFFDLMV 200
SMIA +G+ EA+ LF +M+ + N VT LL AC + + K F L
Sbjct: 356 SMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSL-- 413
Query: 201 KKYRRKPRLEHY--TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
RR + Y + ++D+ +CG + + +P K N + W +++ H
Sbjct: 414 ---RRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTK-NLVCWNAVIAGYAMH 465
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 96/198 (48%), Gaps = 2/198 (1%)
Query: 7 VAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV 66
+A L+H Y + + V+ L+P NV ++ TLI ++ L ++ M
Sbjct: 50 LATKLLSH-YANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTR 108
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
G PD S + +C+ L+ L +Q+H +G D V SSL+ MY +C + D+
Sbjct: 109 GLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDA 168
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHC 186
+ F DVV WS+++AAY G +EA LF +M + N +++ ++ +H
Sbjct: 169 HRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHS 228
Query: 187 GL-KEKGMEFFDLMVKKY 203
GL E + F D+ ++ +
Sbjct: 229 GLYSEAVLMFLDMHLRGF 246
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 101/211 (47%), Gaps = 9/211 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D+ GS+L MY K G + +P +N++ W +IAG A +G A++ ++ +
Sbjct: 416 GISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIF 475
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQ-QIHAEVVKAGASLDVGVISSLISMYSR 119
+LM+ G +PD I+F V+S+CS+ +G ++ K G V + ++++ SR
Sbjct: 476 DLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSR 535
Query: 120 CGCLDDSVKTFLECEYS-DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFE---ANDVT 175
G L+ + + D +W +++++ H ++L E +K FE +N
Sbjct: 536 AGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNN----VSLGEVAAEKLFELEPSNPGN 591
Query: 176 FVSLLYACSHCGLKEKGMEFFDLMVKKYRRK 206
++ L + G+ + D+M K RK
Sbjct: 592 YILLSNIYASKGMWNEVNRVRDMMKNKGLRK 622
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 83/194 (42%), Gaps = 6/194 (3%)
Query: 83 SELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWS 142
S A+L Q +Q HA ++K G D + + L+S Y+ C D+ +V +S
Sbjct: 24 STTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFS 83
Query: 143 SMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLM-VK 201
++I A+ + A++ F QM + ++ S + AC+ + + + V
Sbjct: 84 TLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVS 143
Query: 202 KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAG 261
+ ++ + +V + +C + +A + M + + + W L++A D A
Sbjct: 144 GFDSDSFVQ--SSLVHMYIKCNQIRDAHRVFDRM-FEPDVVSWSALVAAYARQGCVDEAK 200
Query: 262 RIAEEI--LGVNPQ 273
R+ E+ GV P
Sbjct: 201 RLFSEMGDSGVQPN 214
>gi|115455891|ref|NP_001051546.1| Os03g0795200 [Oryza sativa Japonica Group]
gi|50400032|gb|AAT76420.1| putative PPR repeat containing protein [Oryza sativa Japonica
Group]
gi|108711537|gb|ABF99332.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113550017|dbj|BAF13460.1| Os03g0795200 [Oryza sativa Japonica Group]
Length = 611
Score = 323 bits (829), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 170/440 (38%), Positives = 255/440 (57%), Gaps = 26/440 (5%)
Query: 11 SLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRP 70
+L +MY + G + + M V+++ +I ++ L + L + M+ G +P
Sbjct: 178 TLINMYAECGDVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGLKP 237
Query: 71 DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTF 130
+T +SV+S+C+ L L G+ IH + K V V ++LI MY++CG L+D++ F
Sbjct: 238 TSVTLISVLSACALLGALELGRWIHDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVF 297
Query: 131 LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKE 190
+ E D WS M+ AY HG G EAI++FE+M+++ + +DVTF+ +LYACSH G+
Sbjct: 298 QDMESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYACSHSGMVS 357
Query: 191 KGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+G+++FD M ++Y ++HY CV DLL R G L+ A I +P+K AI+W+TLLSA
Sbjct: 358 EGLQYFDSM-REYGIVSGIKHYGCVTDLLARSGQLERAYKFIDELPIKPTAILWRTLLSA 416
Query: 251 CKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEP 310
C H DM R+ E IL ++ YV+ SN+ A+ RW+ ++ R+ M E+ V K P
Sbjct: 417 CAGHGDVDMGKRVFERILELDDSHGGDYVIFSNLCANTGRWEEMNMVRKLMSEKGVVKVP 476
Query: 311 GVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMH-DMDSEEK 369
G S +EI N VH+F GD SHP S E ++E+ ++KL GYVP+T H +M EEK
Sbjct: 477 GCSSIEIDNMVHEFFAGDGSHPHSQEARRMVDEVIEQLKLVGYVPNTSHVFHVEMGEEEK 536
Query: 370 EYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREIIV 410
+L++HSEKLAI+F GL+ P K +S + NR II+
Sbjct: 537 ATSLRYHSEKLAISF-----GLLNTAPGTTLRIVKNLRVCPDCHSMAKLVSMVFNRRIIL 591
Query: 411 RDASRFHHFRNGKCSCGDYW 430
RD +RFHHF +G CSCGDYW
Sbjct: 592 RDLNRFHHFEDGVCSCGDYW 611
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 119/242 (49%), Gaps = 5/242 (2%)
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
G PD TFVS++ +C+ +G+Q H VKAGA+ V +LI+MY+ CG + +
Sbjct: 133 GVAPDTYTFVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYAECGDVRAA 192
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHC 186
F + VV +++MI A EA+ LF +M+ K + VT +S+L AC+
Sbjct: 193 RVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGLKPTSVTLISVLSACALL 252
Query: 187 GLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKT 246
G E G D ++K R ++ T ++D+ +CG L++A + ++M + + W
Sbjct: 253 GALELGRWIHDY-IRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDMESR-DKQAWSV 310
Query: 247 LLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
++ A H A + EE+ G+ P D +L S +G+ F ++MRE
Sbjct: 311 MMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYACSHSGMVSEGLQYF-DSMREY 369
Query: 305 NV 306
+
Sbjct: 370 GI 371
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 89/195 (45%), Gaps = 4/195 (2%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L MY K GSL + V + M R+ AW ++ A +G + + + M+ G +
Sbjct: 278 TALIDMYAKCGSLEDAIGVFQDMESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMK 337
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
PD +TF+ V+ +CS + +G Q + + G + + + +R G L+ + K
Sbjct: 338 PDDVTFLGVLYACSHSGMVSEGLQYFDSMREYGIVSGIKHYGCVTDLLARSGQLERAYKF 397
Query: 130 FLECEYSDV-VLWSSMIAAYGFHGKGEEAINLFEQ-MEQKEFEANDVTFVSLLYACSHCG 187
E +LW ++++A HG + +FE+ +E + D S L C++ G
Sbjct: 398 IDELPIKPTAILWRTLLSACAGHGDVDMGKRVFERILELDDSHGGDYVIFSNL--CANTG 455
Query: 188 LKEKGMEFFDLMVKK 202
E+ LM +K
Sbjct: 456 RWEEMNMVRKLMSEK 470
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 323 bits (829), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 163/444 (36%), Positives = 257/444 (57%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G ELD G SL +Y++ S++ G+ + M ++++ W +I G +QN L + LD +
Sbjct: 532 GLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTF 591
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G +P +I V+ +CS+++ L G+++H+ +KA S D V +LI MY++C
Sbjct: 592 RQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAHLSEDAFVTCALIDMYAKC 651
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
GC++ S F D +W+ +IA YG HG G +AI LFE M+ K + TF+ +L
Sbjct: 652 GCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDSFTFLGVL 711
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+H GL +G+++ M Y KP+LEHY CVVD+LGR G L EA L+ MP + +
Sbjct: 712 IACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACVVDMLGRAGQLTEALKLVNEMPDEPD 771
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+ IW +LLS+C+ + ++ +++++L + P A YVLLSN++A +W V + R+
Sbjct: 772 SGIWSSLLSSCRNYGDLEIGEEVSKKLLELEPNKAENYVLLSNLYAGLGKWDEVRKVRQR 831
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+E + K+ G SW+EI V++F + D S S +I +L ++ GY PDT
Sbjct: 832 MKENGLHKDAGCSWIEIGGMVYRFLVSDGSLSESKKIQQTWIKLEKKISKIGYKPDTSCV 891
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNR 406
+H+++ E K LK HSEKLAI+F +G + + K +S++ R
Sbjct: 892 LHELEEEGKIKILKSHSEKLAISFGLLNTAKGTTLRVCKNLRICVDCHNAIKLVSKVVKR 951
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
+IIVRD RFHHF+NG C+CGD+W
Sbjct: 952 DIIVRDNKRFHHFKNGLCTCGDFW 975
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 118/255 (46%), Gaps = 4/255 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D + ++ Y K SL E+V M + V +W LI AQNG LD +
Sbjct: 431 GFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLF 490
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+M G PD+ T S++ +C+ L L G++IH +++ G LD + SL+S+Y +C
Sbjct: 491 LVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQC 550
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
+ F + E +V W+ MI + + EA++ F QM + ++ +L
Sbjct: 551 SSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVL 610
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC-VVDLLGRCGYLDEAAALIRNMPVKA 239
ACS G E +K + + TC ++D+ +CG ++++ + + K
Sbjct: 611 GACSQVSALRLGKEVHSFALKAHLSEDAF--VTCALIDMYAKCGCMEQSQNIFDRVNEKD 668
Query: 240 NAIIWKTLLSACKTH 254
A +W +++ H
Sbjct: 669 EA-VWNVIIAGYGIH 682
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 121/248 (48%), Gaps = 6/248 (2%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY-NLM 63
D+V + + MY GS + V +++ + L++G ++N L D + + L+
Sbjct: 127 DVVLSTRIIAMYSACGSPSDSRGVFDAAKEKDLFLYNALLSGYSRNALFRDAISLFLELL 186
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
PD T V +C+ +A + G+ +HA +KAG D V ++LI+MY +CG +
Sbjct: 187 SATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFV 246
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM---EQKEFEANDVTFVSLL 180
+ +VK F ++V W+S++ A +G E +F+++ E++ + T V+++
Sbjct: 247 ESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVI 306
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+ G GM L K + +VD+ +CGYL EA AL +M N
Sbjct: 307 PACAAVGEVRMGMVVHGLAF-KLGITEEVTVNNSLVDMYSKCGYLGEARALF-DMNGGKN 364
Query: 241 AIIWKTLL 248
+ W T++
Sbjct: 365 VVSWNTII 372
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 97/188 (51%), Gaps = 5/188 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D G++L MY K G + KV M RN+++W +++ ++NG + +
Sbjct: 226 GFS-DAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVF 284
Query: 61 NLMRMV---GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMY 117
+ + G PD T V+VI +C+ + + G +H K G + +V V +SL+ MY
Sbjct: 285 KRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMY 344
Query: 118 SRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE-FEANDVTF 176
S+CG L ++ F +VV W+++I Y G L ++M+++E N+VT
Sbjct: 345 SKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTV 404
Query: 177 VSLLYACS 184
+++L ACS
Sbjct: 405 LNVLPACS 412
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 97/203 (47%), Gaps = 1/203 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G ++ +SL MY K G L E + + +NV++W T+I G ++ G V +
Sbjct: 329 GITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELL 388
Query: 61 NLM-RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
M R R +++T ++V+ +CS L ++IH + G D V ++ ++ Y++
Sbjct: 389 QEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAK 448
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
C LD + + F E V W+++I A+ +G ++++LF M + + T SL
Sbjct: 449 CSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSL 508
Query: 180 LYACSHCGLKEKGMEFFDLMVKK 202
L AC+ G E M++
Sbjct: 509 LLACARLKFLRCGKEIHGFMLRN 531
>gi|449439619|ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
gi|449487109|ref|XP_004157499.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
Length = 642
Score = 323 bits (829), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 163/430 (37%), Positives = 254/430 (59%), Gaps = 15/430 (3%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y K+G L +V MP+++ ++W T+I G A NG D + +R G RP++++
Sbjct: 213 YTKAGELQLAREVFMKMPLKDDVSWSTMIVGFAHNGNFNDAFAFFREVRREGMRPNEVSL 272
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
V+S+C++ G+ +H V K+G + V ++LI YS+CG LD + F
Sbjct: 273 TGVLSACAQAGAFEFGRILHGFVEKSGFLQIISVNNALIDTYSKCGNLDMARLVFDNMLR 332
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
V W++MIA HG GEEAI LF +ME+ + + +TF+S+LYACSH GL + G +
Sbjct: 333 RSAVSWTAMIAGMAMHGYGEEAIRLFNEMEESNIKPDSITFISILYACSHAGLVDLGCSY 392
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK 255
F MV Y +P +EHY C+VDL GR G L +A + MP+ N I+W+TLL AC H
Sbjct: 393 FSRMVNTYGIEPVIEHYGCMVDLYGRAGKLQQAYDFVCQMPISPNDIVWRTLLGACSIHG 452
Query: 256 STDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWL 315
+ +AG++ ++ ++P+++ +VLLSNI+A A +W+ V+ R +M + +KK PG S +
Sbjct: 453 NLYLAGQVKRQLSELDPENSGDHVLLSNIYAVAGKWKDVAALRRSMTHQRLKKTPGWSMI 512
Query: 316 EIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLR-GYVPDTGADMHDMDSEEKEYNLK 374
E+ ++ F G+K + ++E L E+ S +++ GYVP+ G+ +HD++ EEKE ++
Sbjct: 513 EVNRIIYSFVAGEKQNDIAVEAHQKLREIMSRLRIEGGYVPEVGSVLHDIEVEEKEDSVS 572
Query: 375 HHSEKLAIAF--AEHTRGLIVML------------PFKYISEIKNREIIVRDASRFHHFR 420
HSEKLA+AF A+ RG + + K IS++ EI+VRD SRFH F
Sbjct: 573 QHSEKLAVAFGMAKLPRGRAIRVVKNLRICRDCHTVMKLISKVYEVEIVVRDRSRFHSFT 632
Query: 421 NGKCSCGDYW 430
+G CSC DYW
Sbjct: 633 HGSCSCRDYW 642
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 110/269 (40%), Gaps = 43/269 (15%)
Query: 1 GFELD--LVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLD 58
G+ LD L G++L MY + LV KV M N++AW ++A + E V D
Sbjct: 134 GYGLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIVAWNAIVAACFR---CEGVKD 190
Query: 59 QYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
+ R + R ++ + +++ Y+
Sbjct: 191 AEQVFRCMPIR------------------------------------NLTSWNIMLAGYT 214
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+ G L + + F++ D V WS+MI + +G +A F ++ ++ N+V+
Sbjct: 215 KAGELQLAREVFMKMPLKDDVSWSTMIVGFAHNGNFNDAFAFFREVRREGMRPNEVSLTG 274
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+L AC+ G E G V+K + ++D +CG LD A + NM ++
Sbjct: 275 VLSACAQAGAFEFG-RILHGFVEKSGFLQIISVNNALIDTYSKCGNLDMARLVFDNM-LR 332
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEI 267
+A+ W +++ H + A R+ E+
Sbjct: 333 RSAVSWTAMIAGMAMHGYGEEAIRLFNEM 361
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 85/185 (45%), Gaps = 3/185 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF + ++L Y K G+L V M R+ ++W +IAG A +G E+ + +
Sbjct: 299 GFLQIISVNNALIDTYSKCGNLDMARLVFDNMLRRSAVSWTAMIAGMAMHGYGEEAIRLF 358
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSR 119
N M +PD ITF+S++ +CS + G + +V G + ++ +Y R
Sbjct: 359 NEMEESNIKPDSITFISILYACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCMVDLYGR 418
Query: 120 CGCLDDSVKTFLECEYS-DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFE-ANDVTFV 177
G L + + S + ++W +++ A HG A + Q+ + + E + D +
Sbjct: 419 AGKLQQAYDFVCQMPISPNDIVWRTLLGACSIHGNLYLAGQVKRQLSELDPENSGDHVLL 478
Query: 178 SLLYA 182
S +YA
Sbjct: 479 SNIYA 483
>gi|255546963|ref|XP_002514539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546143|gb|EEF47645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 332
Score = 323 bits (829), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 153/195 (78%), Positives = 173/195 (88%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE +LV GSSLAHMYMKSGSL EGE+VI+ MP RN++AW TLIAGK+QNG +E+VLD Y
Sbjct: 119 GFEFNLVVGSSLAHMYMKSGSLSEGERVIKSMPSRNIVAWNTLIAGKSQNGHSEEVLDLY 178
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
N+MR++GFRPDKITF SVISSCSEL TLGQGQQIHAEV+KAGAS V V SSLISMYSRC
Sbjct: 179 NMMRIMGFRPDKITFASVISSCSELTTLGQGQQIHAEVIKAGASSVVAVTSSLISMYSRC 238
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
GCL+DSVK FLEC+ DV+LWSSMIAAYGFHG+GEEAI LF QMEQ+ EANDVTF+SLL
Sbjct: 239 GCLEDSVKVFLECKDVDVILWSSMIAAYGFHGRGEEAIKLFHQMEQENLEANDVTFLSLL 298
Query: 181 YACSHCGLKEKGMEF 195
YACSHCGLK+KG+E
Sbjct: 299 YACSHCGLKDKGVEI 313
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 126/250 (50%), Gaps = 2/250 (0%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
++++ + L + Y+ SG L + MP RNV W ++AG Q + E+ L+ + M
Sbjct: 22 NIMSCNILINAYIHSGELDSARNLFDEMPERNVATWNAVVAGLIQFEINEEGLNLFRDMY 81
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+GF PD+ T SV+ C+ L ++ G+Q+H VVK G ++ V SSL MY + G L
Sbjct: 82 ELGFLPDEYTLGSVLRGCAGLKSMYAGRQVHCYVVKCGFEFNLVVGSSLAHMYMKSGSLS 141
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ + ++V W+++IA +G EE ++L+ M F + +TF S++ +CS
Sbjct: 142 EGERVIKSMPSRNIVAWNTLIAGKSQNGHSEEVLDLYNMMRIMGFRPDKITFASVISSCS 201
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
+G + ++K + + ++ + RCG L+++ + + I+W
Sbjct: 202 ELTTLGQGQQIHAEVIKA-GASSVVAVTSSLISMYSRCGCLEDSVKVFLECK-DVDVILW 259
Query: 245 KTLLSACKTH 254
++++A H
Sbjct: 260 SSMIAAYGFH 269
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 43/86 (50%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
SSL MY + G L + KV +VI W ++IA +G E+ + ++ M
Sbjct: 229 SSLISMYSRCGCLEDSVKVFLECKDVDVILWSSMIAAYGFHGRGEEAIKLFHQMEQENLE 288
Query: 70 PDKITFVSVISSCSELATLGQGQQIH 95
+ +TF+S++ +CS +G +IH
Sbjct: 289 ANDVTFLSLLYACSHCGLKDKGVEIH 314
>gi|357117655|ref|XP_003560579.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Brachypodium distachyon]
Length = 614
Score = 323 bits (828), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 164/443 (37%), Positives = 261/443 (58%), Gaps = 15/443 (3%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
FE + GSSL MY KSG++ E KV ++P R+ ++ +I+G AQ GL ++ LD +
Sbjct: 173 FESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLGLDDEALDLFR 232
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
+ G + + +TF ++++S S LA+L G+Q+H +++ + + +SLI MYS+CG
Sbjct: 233 QLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQNSLIDMYSKCG 292
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
L S + F + W++M+ YG HG G+E + LF M + E + + VT +++L
Sbjct: 293 KLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTMTE-EVKPDSVTLLAVLS 351
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
CSH GL ++G++ FDL+VK+ + HY CV+DLLGR G L +A LI +MP +
Sbjct: 352 GCSHGGLVDEGLDIFDLIVKEQNAVIHIGHYGCVIDLLGRSGQLQKALDLIEHMPFEPTP 411
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
IW +LL AC+ H + + +A+++L + P +A YV+LSNI+A+A W+ V R+ M
Sbjct: 412 AIWGSLLGACRVHINVSVGEVVAQKLLDMEPGNAGNYVILSNIYAAAGMWKDVFRVRKLM 471
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
E V KEP SW+ + +H F ++ HPR +I+ ++E+ ++K G+VPD +
Sbjct: 472 LENTVTKEPAKSWIILDKVIHTFHSSERFHPRKKDINAKIKEVYVDVKAAGFVPDLSCVL 531
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVMLP------------FKYISEIKNRE 407
HD+D E+KE L HSEKLAI F GL + + K++S++ RE
Sbjct: 532 HDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIQVMKNLRICVDCHNFAKFVSKVYGRE 591
Query: 408 IIVRDASRFHHFRNGKCSCGDYW 430
I +RD +RFH ++G C+CGDYW
Sbjct: 592 ISLRDKNRFHLLKDGACTCGDYW 614
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 147/305 (48%), Gaps = 17/305 (5%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
+ L +Y++ G+L + V+ MP RNV++W +I+G +Q+G + L+ + M G
Sbjct: 79 ATRLIILYVRCGALDDARNVLDGMPERNVVSWTAMISGYSQSGRHAEALELFIRMLRAGC 138
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
+ ++ T +V++SC ++ Q +Q+H+ VVK + V SSL+ MY + G + ++ K
Sbjct: 139 KANEFTLATVLTSCPVHQSIQQVEQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARK 198
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F D V +++I+ Y G +EA++LF Q+ + N VTF +LL + S
Sbjct: 199 VFDMLPERDTVSCTAIISGYAQLGLDDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLAS 258
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHY----TCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
G + L+++K L + ++D+ +CG L + + NMP ++ AI W
Sbjct: 259 LNYGKQVHGLILRK-----ELPFFIVLQNSLIDMYSKCGKLLYSRRVFDNMPQRS-AISW 312
Query: 245 KTLLSACKTH----KSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+L H + + + EE V P +LS +G+ F
Sbjct: 313 NAMLMGYGRHGIGQEVVQLFRTMTEE---VKPDSVTLLAVLSGCSHGGLVDEGLDIFDLI 369
Query: 301 MRERN 305
++E+N
Sbjct: 370 VKEQN 374
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 92/172 (53%), Gaps = 7/172 (4%)
Query: 77 SVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYS 136
+ I++C E LG+G+Q+HA +VKA V + + LI +Y RCG LDD+
Sbjct: 46 AAITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDGMPER 105
Query: 137 DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS-HCGLKEKGMEF 195
+VV W++MI+ Y G+ EA+ LF +M + +AN+ T ++L +C H +++ +E
Sbjct: 106 NVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQ--VEQ 163
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP----VKANAII 243
+V K + + + ++D+ G+ G + EA + +P V AII
Sbjct: 164 VHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAII 215
>gi|297745420|emb|CBI40500.3| unnamed protein product [Vitis vinifera]
Length = 1133
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 177/484 (36%), Positives = 259/484 (53%), Gaps = 59/484 (12%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ D+ G+SL MY+K+ SL + V M RN+ AW +L++G + G+ ED L
Sbjct: 655 GFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLL 714
Query: 61 NLMRMVGFRPDKITFVSVIS-----------------------------------SCSEL 85
N M G +PD +T+ +IS +C+ L
Sbjct: 715 NQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAFFAQMQQEGVMPNSASITCLLRACASL 774
Query: 86 ATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMI 145
+ L +G++IH ++ G DV V ++LI MYS+ L ++ K F + + W+ MI
Sbjct: 775 SLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMI 834
Query: 146 AAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRR 205
+ G G+EAI++F +M++ + +TF +LL AC + GL +G ++FD M+ YR
Sbjct: 835 MGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRI 894
Query: 206 KPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAE 265
PRLEHY C+VDLLGR GYLDEA LI MP+K +A IW LL +C+ HK+ A A+
Sbjct: 895 VPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLKFAETAAK 954
Query: 266 EILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFT 325
+ + P ++A Y+L+ N+++ RW+ + RE M V+ SW++I +VH F+
Sbjct: 955 NLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFS 1014
Query: 326 MGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFA 385
+K HP + +I L +L SEMK GYVPD +MD EK+ L H+EKLAI +
Sbjct: 1015 SDEKPHPDAGKIYFELYQLVSEMKKLGYVPDVNCVYQNMDEVEKQKILLSHTEKLAITY- 1073
Query: 386 EHTRGLIVML---PF----------------KYISEIKNREIIVRDASRFHHFRNGKCSC 426
GLI M P KYIS +K RE+ +RD RFHHFR GKCSC
Sbjct: 1074 ----GLIKMKAGEPIRVIKNTRICSDCHSAAKYISLVKARELFLRDGVRFHHFREGKCSC 1129
Query: 427 GDYW 430
D+W
Sbjct: 1130 NDFW 1133
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 98/200 (49%), Gaps = 1/200 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+LD+ +L + Y + L + +V MP + W I Q+ + ++ +
Sbjct: 553 GFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELF 612
Query: 61 NLMRMVGFRPDKITFVSVI-SSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
M+ + + T V V+ +S SEL L G++ H V++ G DV V +SLI MY +
Sbjct: 613 RKMQFSFLKAETATIVRVLQASISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVK 672
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
L + F + ++ W+S+++ Y F G E+A+ L QME++ + + VT+ +
Sbjct: 673 NHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGM 732
Query: 180 LYACSHCGLKEKGMEFFDLM 199
+ + G ++ + FF M
Sbjct: 733 ISGYAMWGCGKEALAFFAQM 752
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 106/247 (42%), Gaps = 8/247 (3%)
Query: 8 AGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAG-KAQNGLAEDVLDQYNLMRMV 66
A +L Y+ G V + RN + W + + K+ G VL+ + +
Sbjct: 458 AAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGK 517
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
G D + + +C+ + + G +IH ++K G LDV + +L++ Y RC L+ +
Sbjct: 518 GVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKA 577
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC-SH 185
+ F E + +LW+ I K ++ + LF +M+ +A T V +L A S
Sbjct: 578 NQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQASISE 637
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHY--TCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
G G E ++ R + Y T ++D+ + L A A+ NM + N
Sbjct: 638 LGFLNMGKETHGYVL---RNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNR-NIFA 693
Query: 244 WKTLLSA 250
W +L+S
Sbjct: 694 WNSLVSG 700
>gi|15242443|ref|NP_198784.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171206|sp|Q9FK93.1|PP406_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39680; AltName: Full=Protein EMBRYO DEFECTIVE 2744
gi|9758344|dbj|BAB08900.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007080|gb|AED94463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 161/444 (36%), Positives = 260/444 (58%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF ++ A +L +MY K G ++ ++V +N+ T++ Q+ E+ L+ +
Sbjct: 267 GFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLF 326
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M P++ TF +++S +EL+ L QG +H V+K+G V V ++L++MY++
Sbjct: 327 SKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKS 386
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++D+ K F + D+V W++MI+ HG G EA+ F++M N +TF+ +L
Sbjct: 387 GSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVL 446
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH G E+G+ +F+ ++KK+ +P ++HYTC+V LL + G +A +R P++ +
Sbjct: 447 QACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWD 506
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+ W+TLL+AC ++ + ++AE + P D+ YVLLSNIHA ++ W+GV++ R
Sbjct: 507 VVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSL 566
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M R VKKEPGVSW+ I+NQ H F D HP I ++E+ S++K GY PD
Sbjct: 567 MNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGA 626
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA----EHTRGLIVM----------LPFKYISEIKNR 406
HD+D E++E NL +HSEKLA+A+ L V K IS+I R
Sbjct: 627 FHDVDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKISKR 686
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
I++RD++RFHHF +G+CSC DYW
Sbjct: 687 YIVIRDSNRFHHFLDGQCSCCDYW 710
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 135/278 (48%), Gaps = 5/278 (1%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVG-F 68
+SL ++Y+K V K+ LMP RNV++W ++ G +G +VL + M G
Sbjct: 73 NSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGES 132
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
RP++ V SCS + +G+Q H +K G V ++L+ MYS C ++++
Sbjct: 133 RPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIR 192
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
+ Y D+ ++SS ++ Y G +E +++ + ++F N++T++S L S+
Sbjct: 193 VLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRD 252
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
++ MV ++ +E ++++ G+CG + A + + + N + T++
Sbjct: 253 LNLALQVHSRMV-RFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQ-NIFLNTTIM 310
Query: 249 SACKTHKSTDMAGRIAEEILG--VNPQDAAPYVLLSNI 284
A KS + A + ++ V P + +LL++I
Sbjct: 311 DAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSI 348
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 123/246 (50%), Gaps = 4/246 (1%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L +MY E +V+ +P ++ + + ++G + G ++ LD F
Sbjct: 175 NTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFV 234
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
+ +T++S + S L L Q+H+ +V+ G + +V +LI+MY +CG + + +
Sbjct: 235 WNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRV 294
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F + ++ L ++++ AY EEA+NLF +M+ KE N+ TF LL + + L
Sbjct: 295 FDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLL 354
Query: 190 EKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
++G L++K YR + + +V++ + G +++A M + + + W T++
Sbjct: 355 KQGDLLHGLVLKSGYRNHVMVGN--ALVNMYAKSGSIEDARKAFSGMTFR-DIVTWNTMI 411
Query: 249 SACKTH 254
S C H
Sbjct: 412 SGCSHH 417
>gi|413941558|gb|AFW74207.1| hypothetical protein ZEAMMB73_978994 [Zea mays]
Length = 580
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 172/437 (39%), Positives = 261/437 (59%), Gaps = 16/437 (3%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+SL +Y K G L K+ + ++V+AW +I+G QNGLA ++ Y M+M G
Sbjct: 144 TSLVVLYSKCGQLDVARKLFDAIRDKSVVAWNAMISGYEQNGLAGRAIEVYREMQMAGEA 203
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
PD TFV+ +S+C++ L G+Q+ +V ++V + ++L++MY+RCG ++ + +
Sbjct: 204 PDSATFVATLSACAQAGALDLGRQVDKLIVSERMEMNVVLGAALVNMYARCGLVNKAREW 263
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F + +VV W+SMIA YG HG G EA+ LF M Q+ NDVTFV++L AC+H GL
Sbjct: 264 FNMLQERNVVTWTSMIAGYGMHGHGGEAVKLFNLMRQQGPPPNDVTFVAVLSACAHAGLV 323
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRN-MPVKANAIIWKTLL 248
+G + F M Y PR+EHY +VD+ GR G LD+A I + +P + +W +L
Sbjct: 324 SEGRDAFASMKSVYGLVPRVEHYCSMVDMYGRAGLLDDAMRFIHDSIPGEPGPEVWTAML 383
Query: 249 SACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKK 308
ACK HK ++ +AE ++ + P+ + VLLSN++A + + V + R+ M +R +KK
Sbjct: 384 GACKMHKDFNLGVEVAERLIALEPESPSHRVLLSNLYALSGKMNHVEKVRDTMIKRRLKK 443
Query: 309 EPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEE 368
G S +EI H F MG+KSHP++ EI YLE+L ++ GYVP T + +H+++ EE
Sbjct: 444 PIGYSLIEIAGVAHLFRMGEKSHPKTSEIYQYLEKLIEKITDVGYVPKTDSVLHELEEEE 503
Query: 369 KEYNLKHHSEKLAIAFA-EHTRGLIV--------------MLPFKYISEIKNREIIVRDA 413
+E+ L++H EKLA+AF T G L KY+S ++NREIIVRD
Sbjct: 504 REFALRYHGEKLAVAFGLMMTSGCTTPIRIIKNLRICEDCHLAIKYMSAVENREIIVRDM 563
Query: 414 SRFHHFRNGKCSCGDYW 430
RFHHF+ GKCSC +YW
Sbjct: 564 HRFHHFKAGKCSCQEYW 580
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 105/222 (47%), Gaps = 2/222 (0%)
Query: 33 PIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQ 92
P + + +L A+ GL L Y + F SV +C++L+ + G
Sbjct: 66 PAPDSFLFCSLTRATARRGLPAAALAFYRCLLAAALPFSSFAFTSVAKACADLSAIRAGM 125
Query: 93 QIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHG 152
IHA V G + V +SL+ +YS+CG LD + K F VV W++MI+ Y +G
Sbjct: 126 GIHAHAVLLGLGSNRFVQTSLVVLYSKCGQLDVARKLFDAIRDKSVVAWNAMISGYEQNG 185
Query: 153 KGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY 212
AI ++ +M+ + TFV+ L AC+ G + G + L+V + R + +
Sbjct: 186 LAGRAIEVYREMQMAGEAPDSATFVATLSACAQAGALDLGRQVDKLIVSE-RMEMNVVLG 244
Query: 213 TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
+V++ RCG +++A NM + N + W ++++ H
Sbjct: 245 AALVNMYARCGLVNKAREWF-NMLQERNVVTWTSMIAGYGMH 285
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 108/210 (51%), Gaps = 6/210 (2%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
E+++V G++L +MY + G + + + ++ RNV+ W ++IAG +G + + +N
Sbjct: 237 MEMNVVLGAALVNMYARCGLVNKAREWFNMLQERNVVTWTSMIAGYGMHGHGGEAVKLFN 296
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSRC 120
LMR G P+ +TFV+V+S+C+ + +G+ A + G V S++ MY R
Sbjct: 297 LMRQQGPPPNDVTFVAVLSACAHAGLVSEGRDAFASMKSVYGLVPRVEHYCSMVDMYGRA 356
Query: 121 GCLDDSVKTFLECEYSD--VVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEA-NDVTFV 177
G LDD+++ + + +W++M+ A H + + E++ E E+ + +
Sbjct: 357 GLLDDAMRFIHDSIPGEPGPEVWTAMLGACKMHKDFNLGVEVAERLIALEPESPSHRVLL 416
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKP 207
S LYA S G + D M+K+ +KP
Sbjct: 417 SNLYALS--GKMNHVEKVRDTMIKRRLKKP 444
>gi|125588235|gb|EAZ28899.1| hypothetical protein OsJ_12939 [Oryza sativa Japonica Group]
Length = 611
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 170/440 (38%), Positives = 255/440 (57%), Gaps = 26/440 (5%)
Query: 11 SLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRP 70
+L +MY + G + + M V+++ +I ++ L + L + M+ G +P
Sbjct: 178 TLINMYAECGDVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGLKP 237
Query: 71 DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTF 130
+T +SV+S+C+ L L G+ IH + K V V ++LI MY++CG L+D++ F
Sbjct: 238 TSVTLISVLSACALLGALELGRWIHDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVF 297
Query: 131 LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKE 190
+ E D WS M+ AY HG G EAI++FE+M+++ + +DVTF+ +LYACSH G+
Sbjct: 298 QDMESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYACSHSGMVS 357
Query: 191 KGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+G+++FD M ++Y ++HY CV DLL R G L+ A I +P+K AI+W+TLLSA
Sbjct: 358 EGLQYFDSM-REYGIVSGIKHYGCVTDLLARSGQLERAYKFIDELPIKPTAILWRTLLSA 416
Query: 251 CKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEP 310
C H DM R+ E IL ++ YV+ SN+ A+ RW+ ++ R+ M E+ V K P
Sbjct: 417 CAGHGDVDMGKRVFERILELDDSHGGDYVIFSNLCANTGRWEEMNMVRKLMSEKGVVKVP 476
Query: 311 GVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMH-DMDSEEK 369
G S +EI N VH+F GD SHP S E ++E+ ++KL GYVP+T H +M EEK
Sbjct: 477 GCSSIEIDNMVHEFFAGDGSHPHSQEARRMVDEVIEQLKLVGYVPNTSHVFHVEMGEEEK 536
Query: 370 EYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREIIV 410
+L++HSEKLAI+F GL+ P K +S + NR II+
Sbjct: 537 ATSLRYHSEKLAISF-----GLLNTAPGTTLRIVKNLRVCPDCHSMAKLVSMVFNRRIIL 591
Query: 411 RDASRFHHFRNGKCSCGDYW 430
RD +RFHHF +G CSCGDYW
Sbjct: 592 RDLNRFHHFEDGVCSCGDYW 611
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 135/277 (48%), Gaps = 9/277 (3%)
Query: 36 NVIAWITLIAGKAQNGL----AEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQG 91
+V+ + TL+ G A+ G AE+ + M G PD TFVS++ +C+ +G
Sbjct: 98 DVVWYNTLLRGYARGGWGGGCAEEAARVFVRMMEEGVAPDTYTFVSLLKACASARAGEEG 157
Query: 92 QQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFH 151
+Q H VKAGA+ V +LI+MY+ CG + + F + VV +++MI A
Sbjct: 158 RQAHGVAVKAGAAEHEYVAPTLINMYAECGDVRAARVMFDRMDGECVVSYNAMITASVRS 217
Query: 152 GKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEH 211
EA+ LF +M+ K + VT +S+L AC+ G E G D ++K R ++
Sbjct: 218 SLPGEALVLFREMQAKGLKPTSVTLISVLSACALLGALELGRWIHDY-IRKMRLDSLVKV 276
Query: 212 YTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEI--LG 269
T ++D+ +CG L++A + ++M + + W ++ A H A + EE+ G
Sbjct: 277 NTALIDMYAKCGSLEDAIGVFQDMESR-DKQAWSVMMVAYANHGYGREAISMFEEMKKQG 335
Query: 270 VNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNV 306
+ P D +L S +G+ F ++MRE +
Sbjct: 336 MKPDDVTFLGVLYACSHSGMVSEGLQYF-DSMREYGI 371
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 89/195 (45%), Gaps = 4/195 (2%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L MY K GSL + V + M R+ AW ++ A +G + + + M+ G +
Sbjct: 278 TALIDMYAKCGSLEDAIGVFQDMESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMK 337
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
PD +TF+ V+ +CS + +G Q + + G + + + +R G L+ + K
Sbjct: 338 PDDVTFLGVLYACSHSGMVSEGLQYFDSMREYGIVSGIKHYGCVTDLLARSGQLERAYKF 397
Query: 130 FLECEYSDV-VLWSSMIAAYGFHGKGEEAINLFEQ-MEQKEFEANDVTFVSLLYACSHCG 187
E +LW ++++A HG + +FE+ +E + D S L C++ G
Sbjct: 398 IDELPIKPTAILWRTLLSACAGHGDVDMGKRVFERILELDDSHGGDYVIFSNL--CANTG 455
Query: 188 LKEKGMEFFDLMVKK 202
E+ LM +K
Sbjct: 456 RWEEMNMVRKLMSEK 470
>gi|125546028|gb|EAY92167.1| hypothetical protein OsI_13880 [Oryza sativa Indica Group]
Length = 671
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 170/440 (38%), Positives = 255/440 (57%), Gaps = 26/440 (5%)
Query: 11 SLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRP 70
+L +MY + G + + M V+++ +I ++ L + L + M+ G +P
Sbjct: 178 TLINMYAECGDVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGLKP 237
Query: 71 DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTF 130
+T +SV+S+C+ L L G+ IH + K V V ++LI MY++CG L+D++ F
Sbjct: 238 TSVTLISVLSACALLGALELGRWIHDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVF 297
Query: 131 LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKE 190
+ E D WS M+ AY HG G EAI++FE+M+++ + +DVTF+ +LYACSH G+
Sbjct: 298 QDMESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYACSHSGMVS 357
Query: 191 KGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+G+++FD M ++Y ++HY CV DLL R G L+ A I +P+K AI+W+TLLSA
Sbjct: 358 EGLQYFDSM-REYGIVSGIKHYGCVTDLLARSGQLERAYKFIDELPIKPTAILWRTLLSA 416
Query: 251 CKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEP 310
C H DM R+ E IL ++ YV+ SN+ A+ RW+ ++ R+ M E+ V K P
Sbjct: 417 CAGHGDVDMGKRVFERILELDDSHGGDYVIFSNLCANTGRWEEMNMVRKLMSEKGVVKVP 476
Query: 311 GVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMH-DMDSEEK 369
G S +EI N VH+F GD SHP S E ++E+ ++KL GYVP+T H +M EEK
Sbjct: 477 GCSSIEIDNMVHEFFAGDGSHPHSQEARRMVDEVIEQLKLVGYVPNTSHVFHVEMGEEEK 536
Query: 370 EYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREIIV 410
+L++HSEKLAI+F GL+ P K +S + NR II+
Sbjct: 537 ATSLRYHSEKLAISF-----GLLNTAPGTTLRIVKNLRVCPDCHSMAKLVSMVFNRRIIL 591
Query: 411 RDASRFHHFRNGKCSCGDYW 430
RD +RFHHF +G CSCGDYW
Sbjct: 592 RDLNRFHHFEDGVCSCGDYW 611
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 119/242 (49%), Gaps = 5/242 (2%)
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
G PD TFVS++ +C+ +G+Q H VKAGA+ V +LI+MY+ CG + +
Sbjct: 133 GVAPDTYTFVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYAECGDVRAA 192
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHC 186
F + VV +++MI A EA+ LF +M+ K + VT +S+L AC+
Sbjct: 193 RVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGLKPTSVTLISVLSACALL 252
Query: 187 GLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKT 246
G E G D ++K R ++ T ++D+ +CG L++A + ++M + + W
Sbjct: 253 GALELGRWIHDY-IRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDMESR-DKQAWSV 310
Query: 247 LLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
++ A H A + EE+ G+ P D +L S +G+ F ++MRE
Sbjct: 311 MMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYACSHSGMVSEGLQYF-DSMREY 369
Query: 305 NV 306
+
Sbjct: 370 GI 371
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 89/195 (45%), Gaps = 4/195 (2%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L MY K GSL + V + M R+ AW ++ A +G + + + M+ G +
Sbjct: 278 TALIDMYAKCGSLEDAIGVFQDMESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMK 337
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
PD +TF+ V+ +CS + +G Q + + G + + + +R G L+ + K
Sbjct: 338 PDDVTFLGVLYACSHSGMVSEGLQYFDSMREYGIVSGIKHYGCVTDLLARSGQLERAYKF 397
Query: 130 FLECEYSDV-VLWSSMIAAYGFHGKGEEAINLFEQ-MEQKEFEANDVTFVSLLYACSHCG 187
E +LW ++++A HG + +FE+ +E + D S L C++ G
Sbjct: 398 IDELPIKPTAILWRTLLSACAGHGDVDMGKRVFERILELDDSHGGDYVIFSNL--CANTG 455
Query: 188 LKEKGMEFFDLMVKK 202
E+ LM +K
Sbjct: 456 RWEEMNMVRKLMSEK 470
>gi|108863919|gb|ABG22332.1| vegetative storage protein, putative [Oryza sativa Japonica Group]
Length = 645
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 170/445 (38%), Positives = 256/445 (57%), Gaps = 16/445 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + ++ +Y+K G + + +V M ++ +AW ++ G A NG + LD +
Sbjct: 202 GVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLF 261
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVI-SSLISMYSR 119
M+ G +PD +S+C+ L L G+Q +V LD V+ ++LI MY++
Sbjct: 262 LAMQAEGMKPDCYAVAGALSACTRLGALDLGRQA-IRMVDWDEFLDNPVLGTALIDMYAK 320
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG ++ F + D+++W++MI G G + A L QME+ + ND TF+ L
Sbjct: 321 CGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGL 380
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L +C+H GL + G +F M K Y PR+EHY C+VDLL R G L EA L+ +MP+ A
Sbjct: 381 LCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPA 440
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
NA+I LL CK H++T++A + ++++ + P ++ YV+LSNI+++ RW+ ++ R
Sbjct: 441 NAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRL 500
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M+ + V+K P SW+E + +VH+F +GDKSHP S +I L+EL EMK GY P T
Sbjct: 501 DMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEV 560
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAF----------AEHTRGLIVM----LPFKYISEIKN 405
M D++ EEKE+ L HHSEKLAIAF T+ L V K +S I +
Sbjct: 561 VMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCSDCHTAIKLVSRITH 620
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
REIIVRD +RFH FR+G CSC DYW
Sbjct: 621 REIIVRDNNRFHCFRDGSCSCNDYW 645
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 116/243 (47%), Gaps = 10/243 (4%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV--- 66
+SL +Y K G L ++V MP + + W LI G D+ + ++ R
Sbjct: 110 TSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAG---DLREAVHVARNAFAN 166
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
G RPD T V V+++C+ +A L G+ + + G + V V ++ + +Y +CG + +
Sbjct: 167 GMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKA 226
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHC 186
+ F + + D V W +M+ Y +G EA++LF M+ + + + L AC+
Sbjct: 227 REVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRL 286
Query: 187 GLKEKGMEFFDLM-VKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
G + G + ++ ++ P L T ++D+ +CG EA + + M K + I+W
Sbjct: 287 GALDLGRQAIRMVDWDEFLDNPVLG--TALIDMYAKCGSTVEAWVVFQQMR-KKDIIVWN 343
Query: 246 TLL 248
++
Sbjct: 344 AMI 346
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 92/206 (44%), Gaps = 5/206 (2%)
Query: 70 PDKITFVSVISSCSELA-TLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
P +T + S S L L G+Q+HA +K + + V++SL+S+Y++CG L + +
Sbjct: 68 PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 127
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F E + V W+++I AY G EA+++ + T V +L AC+
Sbjct: 128 VFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIAD 187
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
G + ++ + T VDL +CG + +A + M K +A+ W ++
Sbjct: 188 LATGETVWRAAEQEGVAQSVFV-ATAAVDLYVKCGEMAKAREVFDKMRHK-DAVAWGAMV 245
Query: 249 S--ACKTHKSTDMAGRIAEEILGVNP 272
A H + +A + G+ P
Sbjct: 246 GGYASNGHPREALDLFLAMQAEGMKP 271
>gi|357119550|ref|XP_003561500.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Brachypodium distachyon]
Length = 892
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 164/445 (36%), Positives = 257/445 (57%), Gaps = 25/445 (5%)
Query: 6 LVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRM 65
+V+ +++ Y G+L + + +P ++ + W +I G Q+G + L + M
Sbjct: 453 VVSVTAMLTCYADMGALDDARSLFDGLPTKDFVCWNAMIDGYTQHGRPNEALRLFRRMLG 512
Query: 66 VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAG-ASLDVGVISSLISMYSRCGCLD 124
G PD++T V V+S+ ++L T+ G+ +H+ V + L V V ++LI MY +CG L
Sbjct: 513 SGVEPDEVTVVLVLSAVAQLGTVESGKWLHSYVKNSRRVQLSVRVGTALIDMYCKCGSLG 572
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D+V F D+V+W++MI Y HG +A+ +F Q ++ D+TF+ LL ACS
Sbjct: 573 DAVDVFHGIGDKDIVVWNAMINGYAMHGDSRKALEMFVQSREQGLWPTDITFIGLLNACS 632
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H G+ E+G EFF M ++Y P++EHY C+VDLLGR G + EA L+++M + +A++W
Sbjct: 633 HSGMVEEGREFFQSMEREYGIDPKIEHYGCMVDLLGRAGLIKEAFCLVQSMKITPDAVMW 692
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
+LL+AC+ HK+ + +IA+ ++ ++ Y+LLSNI+A+ W V+ R M+
Sbjct: 693 VSLLAACRLHKNMSLGQQIADYLVAKGLANSGMYILLSNIYAAVGNWGEVARVRSMMKAS 752
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
++KEPG S +EI +V++F GD SHPR+ EI + L+++ +K G+VP T +HD+
Sbjct: 753 GIQKEPGCSSIEIDREVYEFVAGDMSHPRTDEIYVMLDKMNGLVKEHGHVPQTELVLHDL 812
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKN 405
D KE L HSEKLA+AF GLI P K IS I
Sbjct: 813 DEATKEKALAVHSEKLALAF-----GLISTQPGATIKIVKNLRACSDCHAVLKLISRITG 867
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
R+I+ RD +RFHHF +G CSCGDYW
Sbjct: 868 RKIVFRDRNRFHHFVDGSCSCGDYW 892
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 128/334 (38%), Gaps = 42/334 (12%)
Query: 12 LAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPD 71
L Y SG L ++R I + + I + G L + M G P
Sbjct: 329 LQRAYAASGRLDLSLALLRRTRDPTAIFYTSAIHAHSSRGHRLPALALLSDMLAQGLLPT 388
Query: 72 KITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC----------- 120
T + + +C L+ G+ +H K + D V ++L+ MY+R
Sbjct: 389 AHTLSASLPACRGLS---PGRALHGYAFKLALAGDSYVATALLGMYARAGDATAARALFD 445
Query: 121 ---------------------GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAIN 159
G LDD+ F D V W++MI Y HG+ EA+
Sbjct: 446 DMLPDPHVVSVTAMLTCYADMGALDDARSLFDGLPTKDFVCWNAMIDGYTQHGRPNEALR 505
Query: 160 LFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLL 219
LF +M E ++VT V +L A + G E G + R + + T ++D+
Sbjct: 506 LFRRMLGSGVEPDEVTVVLVLSAVAQLGTVESGKWLHSYVKNSRRVQLSVRVGTALIDMY 565
Query: 220 GRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH----KSTDMAGRIAEEILGVNPQDA 275
+CG L +A + + K + ++W +++ H K+ +M + E+ G+ P D
Sbjct: 566 CKCGSLGDAVDVFHGIGDK-DIVVWNAMINGYAMHGDSRKALEMFVQSREQ--GLWPTDI 622
Query: 276 APYVLLSNIHASAKRWQGVSEFREAMRERNVKKE 309
LL+ S +G F+ RE + +
Sbjct: 623 TFIGLLNACSHSGMVEEGREFFQSMEREYGIDPK 656
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 12/156 (7%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
+L + G++L MY K GSL + V + ++++ W +I G A +G + L+ +
Sbjct: 552 QLSVRVGTALIDMYCKCGSLGDAVDVFHGIGDKDIVVWNAMINGYAMHGDSRKALEMFVQ 611
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSRCG 121
R G P ITF+ ++++CS + +G++ + + G + ++ + R G
Sbjct: 612 SREQGLWPTDITFIGLLNACSHSGMVEEGREFFQSMEREYGIDPKIEHYGCMVDLLGRAG 671
Query: 122 ------CLDDSVKTFLECEYSDVVLWSSMIAAYGFH 151
CL S+K D V+W S++AA H
Sbjct: 672 LIKEAFCLVQSMKI-----TPDAVMWVSLLAACRLH 702
>gi|449435366|ref|XP_004135466.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 182/456 (39%), Positives = 268/456 (58%), Gaps = 32/456 (7%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +LD+ G+SL H+Y G L KV MP+R++++W +I Q+GL E+ L +
Sbjct: 156 GLDLDVYVGNSLIHLYASCGCLSMALKVFEKMPLRSLVSWNVMIDAYVQSGLFENALKLF 215
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVV-KAGASL--DVGVISSLISMY 117
M+ F PD T S++S+C+ + L G HA V+ KA ++ DV + SSL+ MY
Sbjct: 216 VEMQN-SFEPDGYTMQSIVSACAGIGALSLGMWAHAYVLRKASGAMAGDVLINSSLVDMY 274
Query: 118 SRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM-EQKEFEANDVTF 176
S+CG L + + F D+ W+SMI A HG+G+ A+ F ++ E ++F N VTF
Sbjct: 275 SKCGSLRMAQQVFETMPKHDLNSWNSMILALAMHGRGQAALQCFSRLVEMEKFLPNSVTF 334
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
V +L AC+H G+ G ++FD+MV Y+ +PRLEHY C+VDLL R G++DEA L+ NM
Sbjct: 335 VGVLSACNHGGMVADGRKYFDMMVNDYKIEPRLEHYGCLVDLLSRSGFIDEALELVANMH 394
Query: 237 VKANAIIWKTLLSAC-KTHKSTDMAGRIAEEILGVNPQ-DAAPYVLLSNIHASAKRWQGV 294
+K +A+IW++LL AC K + +++ +A +IL + YV+LS ++ASA++W V
Sbjct: 395 IKPDAVIWRSLLDACYKQNAGVELSEEVAFKILQSEKTISSGVYVMLSRVYASARQWNDV 454
Query: 295 SEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYV 354
R+ M + V KEPG S +EI H+F GD SHPR EI ++ + +++ RGY
Sbjct: 455 GIIRKVMTDMGVTKEPGCSSIEIDGISHEFFAGDTSHPRIKEIYGVIDLIEEKLERRGYS 514
Query: 355 PD-TGADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP----------------- 396
PD + A M D K+ +LK HSE+LAIAF GL+ + P
Sbjct: 515 PDCSQATMVDEPDNIKQQSLKLHSERLAIAF-----GLLNLKPGTPVRIFKNLRVCNDCH 569
Query: 397 --FKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
K ISEI N EII+RD +RFHHF++G CSC D+W
Sbjct: 570 QVTKLISEIFNVEIIMRDRNRFHHFKHGMCSCMDFW 605
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 112/223 (50%), Gaps = 6/223 (2%)
Query: 36 NVIAWITLIAGKAQN-GLAEDVLDQ-YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQ 93
N W TLI A++ E ++ Y ++ PDK TF ++ +C+ + L +G+Q
Sbjct: 88 NSFMWNTLIGACARSLDRKEQAIEIFYRMLEEGSVEPDKHTFPFLLKACAYVFALSEGRQ 147
Query: 94 IHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGK 153
HA++ K G LDV V +SLI +Y+ CGCL ++K F + +V W+ MI AY G
Sbjct: 148 AHAQIFKLGLDLDVYVGNSLIHLYASCGCLSMALKVFEKMPLRSLVSWNVMIDAYVQSGL 207
Query: 154 GEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYR--RKPRLEH 211
E A+ LF +M Q FE + T S++ AC+ G GM +++K +
Sbjct: 208 FENALKLFVEM-QNSFEPDGYTMQSIVSACAGIGALSLGMWAHAYVLRKASGAMAGDVLI 266
Query: 212 YTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
+ +VD+ +CG L A + MP K + W +++ A H
Sbjct: 267 NSSLVDMYSKCGSLRMAQQVFETMP-KHDLNSWNSMILALAMH 308
>gi|357457659|ref|XP_003599110.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488158|gb|AES69361.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 623
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 159/443 (35%), Positives = 267/443 (60%), Gaps = 27/443 (6%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPI--RNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVG 67
++L +MY K G + ++ MP +++++W +++A AQNG+ + + +++MR+ G
Sbjct: 186 NALVNMYGKFGFVESAFRLFSEMPESEKSIVSWNSIVAVCAQNGMPNEAFNCFDMMRVNG 245
Query: 68 FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV 127
F PD T VS++ +C + +H + G ++ ++++L+++YS+ G L++S
Sbjct: 246 FFPDDATMVSLLQACENFPLGRMVEVLHGVIFTCGLDENLTIVTTLLNLYSKLGRLNNSR 305
Query: 128 KTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE-FEANDVTFVSLLYACSHC 186
K F E D V W++M+A Y HG G+EAI FE++ ++E E + VTF LL ACSH
Sbjct: 306 KVFEEISKPDKVAWTAMLAGYAMHGCGKEAIEFFERIVREEGMEPDHVTFTHLLSACSHS 365
Query: 187 GLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKT 246
GL ++G FF +M Y+ +PRL+HY+C+VDLLGRCG LD+A LI+NMP + N+ +W
Sbjct: 366 GLVKEGKYFFRVMSDVYKVQPRLDHYSCMVDLLGRCGLLDDAHELIKNMPFEPNSGVWGA 425
Query: 247 LLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNV 306
LL AC+ H++ D+ A+ ++ ++P D Y++LSN++++A W S+ R M+ + +
Sbjct: 426 LLGACRVHRNIDLGKEAAKNLIALDPSDPRNYIMLSNMYSAAGLWNDASKVRTLMKNKVL 485
Query: 307 KKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDS 366
+ G S++E N++H+F + D +HP S I LEE+ +++ G+V +T + +HD+D
Sbjct: 486 TRNQGCSFIEHGNKIHRFVVDDYTHPDSHRIHKKLEEVMKKIQDVGFVHETESILHDVDE 545
Query: 367 EEKEYNLKHHSEKLAIAFAEHTRGLIVM---LPF----------------KYISEIKNRE 407
E K + HSEK+A+A+ GL+V +P K++S ++ R
Sbjct: 546 EVKIDMITKHSEKIALAY-----GLLVTNADMPLVIIKNLRICRDCHNTVKFVSMVEKRT 600
Query: 408 IIVRDASRFHHFRNGKCSCGDYW 430
II+RD RFH F G CSCGDYW
Sbjct: 601 IIIRDTKRFHQFSGGLCSCGDYW 623
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 138/300 (46%), Gaps = 8/300 (2%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D G L Y+K G + + MP ++ ++W +L++G A+ G + L + M+
Sbjct: 79 DGFIGDQLVSCYLKMGPTKDAYLLFDEMPKKDFVSWNSLVSGLAKIGQLGECLSVFCKMK 138
Query: 65 MVG-FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
+ ++ TF+SVIS+C +G +H +K G +V V+++L++MY + G +
Sbjct: 139 SDSELKLNEFTFLSVISACVSEKACDEGYYVHCCAMKLGLVYEVKVVNALVNMYGKFGFV 198
Query: 124 DDSVKTFLECEYSD--VVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+ + + F E S+ +V W+S++A +G EA N F+ M F +D T VSLL
Sbjct: 199 ESAFRLFSEMPESEKSIVSWNSIVAVCAQNGMPNEAFNCFDMMRVNGFFPDDATMVSLLQ 258
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
AC + L + +E ++ L T +++L + G L+ + + + K +
Sbjct: 259 ACENFPLG-RMVEVLHGVIFTCGLDENLTIVTTLLNLYSKLGRLNNSRKVFEEIS-KPDK 316
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEIL---GVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
+ W +L+ H A E I+ G+ P LLS S +G FR
Sbjct: 317 VAWTAMLAGYAMHGCGKEAIEFFERIVREEGMEPDHVTFTHLLSACSHSGLVKEGKYFFR 376
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 105/230 (45%), Gaps = 14/230 (6%)
Query: 59 QYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
Q+N + F P T + + S S ++ + IHA V+K+ D + L+S Y
Sbjct: 35 QFNAISTHHFDPFLSTLILHLKSSSSVSIC---RIIHAHVIKSLDYRDGFIGDQLVSCYL 91
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQ-KEFEANDVTFV 177
+ G D+ F E D V W+S+++ G+ E +++F +M+ E + N+ TF+
Sbjct: 92 KMGPTKDAYLLFDEMPKKDFVSWNSLVSGLAKIGQLGECLSVFCKMKSDSELKLNEFTFL 151
Query: 178 SLLYACSHCGLKEKGME---FFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRN 234
S++ AC + EK + + K ++ +V++ G+ G+++ A L
Sbjct: 152 SVISAC----VSEKACDEGYYVHCCAMKLGLVYEVKVVNALVNMYGKFGFVESAFRLFSE 207
Query: 235 MPVKANAII-WKTLLSACKTHKSTDMAGRIAE--EILGVNPQDAAPYVLL 281
MP +I+ W ++++ C + + A + + G P DA LL
Sbjct: 208 MPESEKSIVSWNSIVAVCAQNGMPNEAFNCFDMMRVNGFFPDDATMVSLL 257
>gi|297611064|ref|NP_001065554.2| Os11g0109600 [Oryza sativa Japonica Group]
gi|255679703|dbj|BAF27399.2| Os11g0109600 [Oryza sativa Japonica Group]
Length = 1124
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 170/445 (38%), Positives = 256/445 (57%), Gaps = 16/445 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + ++ +Y+K G + + +V M ++ +AW ++ G A NG + LD +
Sbjct: 681 GVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLF 740
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVI-SSLISMYSR 119
M+ G +PD +S+C+ L L G+Q +V LD V+ ++LI MY++
Sbjct: 741 LAMQAEGMKPDCYAVAGALSACTRLGALDLGRQA-IRMVDWDEFLDNPVLGTALIDMYAK 799
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG ++ F + D+++W++MI G G + A L QME+ + ND TF+ L
Sbjct: 800 CGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGL 859
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L +C+H GL + G +F M K Y PR+EHY C+VDLL R G L EA L+ +MP+ A
Sbjct: 860 LCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPA 919
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
NA+I LL CK H++T++A + ++++ + P ++ YV+LSNI+++ RW+ ++ R
Sbjct: 920 NAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRL 979
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M+ + V+K P SW+E + +VH+F +GDKSHP S +I L+EL EMK GY P T
Sbjct: 980 DMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEV 1039
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAF----------AEHTRGLIVM----LPFKYISEIKN 405
M D++ EEKE+ L HHSEKLAIAF T+ L V K +S I +
Sbjct: 1040 VMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCSDCHTAIKLVSRITH 1099
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
REIIVRD +RFH FR+G CSC DYW
Sbjct: 1100 REIIVRDNNRFHCFRDGSCSCNDYW 1124
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 116/243 (47%), Gaps = 10/243 (4%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV--- 66
+SL +Y K G L ++V MP + + W LI G D+ + ++ R
Sbjct: 589 TSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAG---DLREAVHVARNAFAN 645
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
G RPD T V V+++C+ +A L G+ + + G + V V ++ + +Y +CG + +
Sbjct: 646 GMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKA 705
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHC 186
+ F + + D V W +M+ Y +G EA++LF M+ + + + L AC+
Sbjct: 706 REVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRL 765
Query: 187 GLKEKGMEFFDLM-VKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
G + G + ++ ++ P L T ++D+ +CG EA + + M K + I+W
Sbjct: 766 GALDLGRQAIRMVDWDEFLDNPVLG--TALIDMYAKCGSTVEAWVVFQQM-RKKDIIVWN 822
Query: 246 TLL 248
++
Sbjct: 823 AMI 825
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 92/206 (44%), Gaps = 5/206 (2%)
Query: 70 PDKITFVSVISSCSELA-TLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
P +T + S S L L G+Q+HA +K + + V++SL+S+Y++CG L + +
Sbjct: 547 PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 606
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F E + V W+++I AY G EA+++ + T V +L AC+
Sbjct: 607 VFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIAD 666
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
G + ++ + T VDL +CG + +A + M K +A+ W ++
Sbjct: 667 LATGETVWRAAEQEGVAQSVFV-ATAAVDLYVKCGEMAKAREVFDKMRHK-DAVAWGAMV 724
Query: 249 S--ACKTHKSTDMAGRIAEEILGVNP 272
A H + +A + G+ P
Sbjct: 725 GGYASNGHPREALDLFLAMQAEGMKP 750
>gi|357136551|ref|XP_003569867.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Brachypodium distachyon]
Length = 580
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 177/446 (39%), Positives = 269/446 (60%), Gaps = 16/446 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D ++L +Y K G L K+ + +NV+AW +I+G QNGLAE ++ Y
Sbjct: 135 GFGSDRFVLTALVVLYSKCGRLPVARKLFDAIRDKNVVAWNAMISGYEQNGLAEQGIEVY 194
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M++ PD +TFV+ +S+C++ L G+++ +V + V + S+L++MY+RC
Sbjct: 195 KEMKVAKAVPDSMTFVATLSACAQAGALDLGREVERRIVSERMDISVFLGSALVNMYARC 254
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +D + + F + +VV W+SMIA YG HG G EAI L+ M K NDVTFV++L
Sbjct: 255 GVVDKARQWFDVLQERNVVTWTSMIAGYGMHGHGHEAIKLYHLMRCKGPPPNDVTFVAVL 314
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRN-MPVKA 239
AC+H GL +G + F M + Y PR+EHY +VD+ GR G L+EA IR+ MP
Sbjct: 315 SACAHAGLITEGRDAFACMKRVYGLAPRVEHYCSMVDMYGRAGRLEEAMQFIRDSMPGDP 374
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
+W +L ACK HK+ + +AE ++ + P++ + +VLLSNI+A + + V + R
Sbjct: 375 GPEVWTAILGACKMHKNFSLGVEVAERLIRLEPENPSYHVLLSNIYALSGKMYHVEKVRN 434
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M +R +KK+ G S +E+ H F MG+KSH ++ EI YLEEL + GY+P+T +
Sbjct: 435 TMIKRRLKKQIGYSLIELGGTSHLFRMGEKSHQKTREIYQYLEELVHRISAAGYMPETES 494
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAF-----AEHTRGLIVM----------LPFKYISEIK 404
+H+++ EE+E L++HSEKLA+A+ A T L V+ L K++S ++
Sbjct: 495 VLHELEEEEREGALRYHSEKLAVAYGLMMSAGSTTPLRVIKNLRICSDCHLAIKFMSAVE 554
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
NREIIVRD RFHHF++GKCSC +YW
Sbjct: 555 NREIIVRDKHRFHHFKDGKCSCLEYW 580
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 107/222 (48%), Gaps = 2/222 (0%)
Query: 33 PIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQ 92
P + + +L GL L Y + F +V +C++L+ L G
Sbjct: 66 PASDSFLFSSLARAATHQGLPLAALAFYRCLLSAALPFSSFAFTAVAKACADLSALRTGM 125
Query: 93 QIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHG 152
+HA + G D V+++L+ +YS+CG L + K F +VV W++MI+ Y +G
Sbjct: 126 TVHAHSILLGFGSDRFVLTALVVLYSKCGRLPVARKLFDAIRDKNVVAWNAMISGYEQNG 185
Query: 153 KGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY 212
E+ I ++++M+ + + +TFV+ L AC+ G + G E +V + R +
Sbjct: 186 LAEQGIEVYKEMKVAKAVPDSMTFVATLSACAQAGALDLGREVERRIVSE-RMDISVFLG 244
Query: 213 TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
+ +V++ RCG +D+A ++ + N + W ++++ H
Sbjct: 245 SALVNMYARCGVVDKARQWF-DVLQERNVVTWTSMIAGYGMH 285
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 166/446 (37%), Positives = 260/446 (58%), Gaps = 24/446 (5%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
LD ++ +S+ MK GS+ + + +MP +++++W +I+G AQ+ + L ++ M
Sbjct: 368 LDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEM 427
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
++ RPD+ VSVIS+C+ LA L QG+ +HA + K G ++V + ++L+ MY +CGC+
Sbjct: 428 QLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCV 487
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
+++++ F E V W+++I +G E ++++F +M+ N++TF+ +L AC
Sbjct: 488 ENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGAC 547
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
H GL ++G F M++K+ +P ++HY C+VDLLGR G L+EA LI +MP+ +
Sbjct: 548 RHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVAT 607
Query: 244 WKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
W LL ACK H T+M R+ +++ + P +VLLSNI AS W+ V E R M++
Sbjct: 608 WGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQ 667
Query: 304 RNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHD 363
+ V K PG S +E VH+F GDK+HP +++ L E+ +K+ GY PDT D
Sbjct: 668 QGVVKTPGCSLIEANGVVHEFLAGDKTHPWINKVEGMLNEMAKRLKMEGYAPDTNEVSLD 727
Query: 364 MDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPFKYISEIKN------------------ 405
+D EEKE L HSEKLAIAF GL+ + P I +KN
Sbjct: 728 IDEEEKETTLFRHSEKLAIAF-----GLLTISPPTPIRIMKNLRICNDCHTAAKLISKAY 782
Query: 406 -REIIVRDASRFHHFRNGKCSCGDYW 430
REI+VRD RFH+F+ G CSC DYW
Sbjct: 783 AREIVVRDRHRFHYFKEGACSCMDYW 808
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 134/274 (48%), Gaps = 36/274 (13%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
++VA +S+ + K G ++E K+ M +++++W LI+G QNG+ E+ L + M
Sbjct: 237 NIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMN 296
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G R D++ VSV+S+C+ L+ + G+ IH V++ G V + ++LI MYS G +
Sbjct: 297 ANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIM 356
Query: 125 DSVKTF------------------LEC-------------EYSDVVLWSSMIAAYGFHGK 153
D+ K F ++C D+V WS++I+ Y H
Sbjct: 357 DAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDC 416
Query: 154 GEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYT 213
E + LF +M+ + ++ VS++ AC+H ++G ++ ++K K + T
Sbjct: 417 FSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQG-KWVHAYIRKNGLKVNVILGT 475
Query: 214 CVVDLLGRCGYLDEAAALIRNMPVKA----NAII 243
++D+ +CG ++ A + M K NA+I
Sbjct: 476 TLLDMYMKCGCVENALEVFNGMEEKGVSSWNALI 509
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 112/231 (48%), Gaps = 13/231 (5%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
N W T++ Q+ AE L Y LM PD T+ V+ +C+ G++IH
Sbjct: 105 NGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIH 164
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGE 155
V+K G DV V ++LI+MY+ CG + D+ K F E D V W+S++A Y G E
Sbjct: 165 DHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDVE 224
Query: 156 EAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV 215
EA +F+QM Q+ A++ S++ G + + F+ M +K + ++ +
Sbjct: 225 EAKLIFDQMPQRNIVASN----SMIVLLGKMGQVMEAWKLFNEMDEK-----DMVSWSAL 275
Query: 216 VDLLGRCGYLDEAAALIRNMP---VKANAIIWKTLLSACKTHKSTDMAGRI 263
+ + G +EA + M ++ + ++ ++LSAC H S G++
Sbjct: 276 ISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSAC-AHLSIVKTGKM 325
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 82/157 (52%), Gaps = 2/157 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +++++ G++L MYMK G + +V M + V +W LI G A NGL E LD +
Sbjct: 466 GLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMF 525
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVV-KAGASLDVGVISSLISMYSR 119
+ M+ G P++ITF+ V+ +C + + +G+ A ++ K G +V ++ + R
Sbjct: 526 SEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGR 585
Query: 120 CGCLDDSVKTFLECEYS-DVVLWSSMIAAYGFHGKGE 155
G L+++ K + DV W +++ A HG E
Sbjct: 586 AGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTE 622
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 116/264 (43%), Gaps = 49/264 (18%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ D+ ++L +MY G++ + K+ P+ + ++W +++AG + G E+ +
Sbjct: 171 GFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDVEEAKLIF 230
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M P + ++++S S + LG+ Q+
Sbjct: 231 DQM------PQR----NIVASNSMIVLLGKMGQVM------------------------- 255
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
++ K F E + D+V WS++I+ Y +G EEA+ +F +M ++V VS+L
Sbjct: 256 ----EAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVL 311
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY----TCVVDLLGRCGYLDEAAALIRNMP 236
AC+H + + G L+++ +E Y ++ + G + +A L N
Sbjct: 312 SACAHLSIVKTGKMIHGLVIRM-----GIESYVNLQNALIHMYSGSGEIMDAQKLF-NGS 365
Query: 237 VKANAIIWKTLLSACKTHKSTDMA 260
+ I W +++S C S + A
Sbjct: 366 HNLDQISWNSMISGCMKCGSVEKA 389
>gi|356531902|ref|XP_003534515.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1011
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 175/460 (38%), Positives = 252/460 (54%), Gaps = 30/460 (6%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPI----------------RNVIAWITLI 44
GF D SSL MY K G + V++ +P+ +++W ++
Sbjct: 552 GFCRDGFIRSSLVEMYCKCGRMDNASIVLKDVPLDFLKNGNAGVTCKELKAGIVSWGLMV 611
Query: 45 AGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGAS 104
+G NG ED L + LM D T ++IS+C+ L G+ +HA K G
Sbjct: 612 SGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYNHKIGHR 671
Query: 105 LDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM 164
+D V SSLI MYS+ G LDD+ F + ++V W+SMI+ HG+G++AI LFE+M
Sbjct: 672 IDAYVGSSLIDMYSKSGSLDDAWTIFRQTNEPNIVFWTSMISGCALHGQGKQAICLFEEM 731
Query: 165 EQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGY 224
+ N+VTF+ +L AC H GL E+G +F +M Y P +EH T +VDL GR G+
Sbjct: 732 LNQGIIPNEVTFLGVLNACCHAGLLEEGCRYFRMMKDAYCINPGVEHCTSMVDLYGRAGH 791
Query: 225 LDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNI 284
L E I + +WK+ LS+C+ HK+ +M ++E +L V P D YVLLSN+
Sbjct: 792 LTETKNFIFENGISHLTSVWKSFLSSCRLHKNVEMGKWVSEMLLQVAPSDPGAYVLLSNM 851
Query: 285 HASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEEL 344
AS RW + R M +R +KK+PG SW+++K+Q+H F MGD+SHP+ EI YL+ L
Sbjct: 852 CASNHRWDEAARVRSLMHQRGIKKQPGQSWIQLKDQIHTFIMGDRSHPQDEEIYSYLDIL 911
Query: 345 TSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFA---EHTRGLIVMLP----- 396
+K GY D M D++ E+ E + HHSEKLA+ F R I ++
Sbjct: 912 IGRLKEIGYSFDVKLVMQDVEEEQGEVLISHHSEKLAVVFGIINTANRTPIRIIKNLRIC 971
Query: 397 ------FKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
KY S++ +REII+RD RFHHF++G CSCGDYW
Sbjct: 972 TDCHNFIKYASQLLDREIILRDIHRFHHFKHGGCSCGDYW 1011
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 156/332 (46%), Gaps = 30/332 (9%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E D+V+ + + Y+++G + + + R +P ++V++W T++ G Q G L+Q
Sbjct: 453 EGDVVSWNIMISAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLMQFGYERQALEQLYC 512
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M G +TF + S L+ + G+Q+H V+K G D + SSL+ MY +CG
Sbjct: 513 MVECGTEFSVVTFSIALILSSSLSLVELGRQLHGMVLKFGFCRDGFIRSSLVEMYCKCGR 572
Query: 123 LD-------DSVKTFLE-------CE--YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQ 166
+D D FL+ C+ + +V W M++ Y ++GK E+ + F M +
Sbjct: 573 MDNASIVLKDVPLDFLKNGNAGVTCKELKAGIVSWGLMVSGYVWNGKYEDGLKTFRLMVR 632
Query: 167 KEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRK--PRLEHY--TCVVDLLGRC 222
+ + T +++ AC++ G+ E G V Y K R++ Y + ++D+ +
Sbjct: 633 ELVVVDIRTVTTIISACANAGILEFGRH-----VHAYNHKIGHRIDAYVGSSLIDMYSKS 687
Query: 223 GYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVL 280
G LD+A + R + N + W +++S C H A + EE+L G+ P + +
Sbjct: 688 GSLDDAWTIFRQTN-EPNIVFWTSMISGCALHGQGKQAICLFEEMLNQGIIPNEVTFLGV 746
Query: 281 LSNIHASAKRWQGVSEFREAMRERNVKKEPGV 312
L+ + +G FR M + PGV
Sbjct: 747 LNACCHAGLLEEGCRYFR--MMKDAYCINPGV 776
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 124/264 (46%), Gaps = 34/264 (12%)
Query: 6 LVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRM 65
L + + L +Y+KS ++ K+ +P RN W LI+G ++ G +E V + MR
Sbjct: 324 LNSANYLLTLYVKSSNMDHARKLFDEIPQRNTQTWTILISGFSRAGSSEVVFKLFREMRA 383
Query: 66 VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD 125
G P++ T S+ CS L G+ +HA +++ G DV + +S++ +Y +C +
Sbjct: 384 KGACPNQYTLSSLFKCCSLDINLQLGKGVHAWMLRNGIDADVVLGNSILDLYLKCKVFEY 443
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL------ 179
+ + F DVV W+ MI+AY G E+++++F ++ K+ + + L
Sbjct: 444 AERVFELMNEGDVVSWNIMISAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLMQFGYE 503
Query: 180 ------LYACSHCGLK-------------------EKGMEFFDLMVK-KYRRKPRLEHYT 213
LY CG + E G + +++K + R + +
Sbjct: 504 RQALEQLYCMVECGTEFSVVTFSIALILSSSLSLVELGRQLHGMVLKFGFCRDGFIR--S 561
Query: 214 CVVDLLGRCGYLDEAAALIRNMPV 237
+V++ +CG +D A+ +++++P+
Sbjct: 562 SLVEMYCKCGRMDNASIVLKDVPL 585
>gi|222615375|gb|EEE51507.1| hypothetical protein OsJ_32672 [Oryza sativa Japonica Group]
Length = 1100
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 170/445 (38%), Positives = 256/445 (57%), Gaps = 16/445 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + ++ +Y+K G + + +V M ++ +AW ++ G A NG + LD +
Sbjct: 657 GVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLF 716
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVI-SSLISMYSR 119
M+ G +PD +S+C+ L L G+Q +V LD V+ ++LI MY++
Sbjct: 717 LAMQAEGMKPDCYAVAGALSACTRLGALDLGRQA-IRMVDWDEFLDNPVLGTALIDMYAK 775
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG ++ F + D+++W++MI G G + A L QME+ + ND TF+ L
Sbjct: 776 CGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGL 835
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L +C+H GL + G +F M K Y PR+EHY C+VDLL R G L EA L+ +MP+ A
Sbjct: 836 LCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPA 895
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
NA+I LL CK H++T++A + ++++ + P ++ YV+LSNI+++ RW+ ++ R
Sbjct: 896 NAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRL 955
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M+ + V+K P SW+E + +VH+F +GDKSHP S +I L+EL EMK GY P T
Sbjct: 956 DMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEV 1015
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAF----------AEHTRGLIVM----LPFKYISEIKN 405
M D++ EEKE+ L HHSEKLAIAF T+ L V K +S I +
Sbjct: 1016 VMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCSDCHTAIKLVSRITH 1075
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
REIIVRD +RFH FR+G CSC DYW
Sbjct: 1076 REIIVRDNNRFHCFRDGSCSCNDYW 1100
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 116/243 (47%), Gaps = 10/243 (4%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV--- 66
+SL +Y K G L ++V MP + + W LI G D+ + ++ R
Sbjct: 565 TSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAG---DLREAVHVARNAFAN 621
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
G RPD T V V+++C+ +A L G+ + + G + V V ++ + +Y +CG + +
Sbjct: 622 GMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKA 681
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHC 186
+ F + + D V W +M+ Y +G EA++LF M+ + + + L AC+
Sbjct: 682 REVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRL 741
Query: 187 GLKEKGMEFFDLM-VKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
G + G + ++ ++ P L T ++D+ +CG EA + + M K + I+W
Sbjct: 742 GALDLGRQAIRMVDWDEFLDNPVLG--TALIDMYAKCGSTVEAWVVFQQM-RKKDIIVWN 798
Query: 246 TLL 248
++
Sbjct: 799 AMI 801
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 92/206 (44%), Gaps = 5/206 (2%)
Query: 70 PDKITFVSVISSCSELA-TLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
P +T + S S L L G+Q+HA +K + + V++SL+S+Y++CG L + +
Sbjct: 523 PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 582
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F E + V W+++I AY G EA+++ + T V +L AC+
Sbjct: 583 VFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIAD 642
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
G + ++ + T VDL +CG + +A + M K +A+ W ++
Sbjct: 643 LATGETVWRAAEQEGVAQSVFV-ATAAVDLYVKCGEMAKAREVFDKMRHK-DAVAWGAMV 700
Query: 249 S--ACKTHKSTDMAGRIAEEILGVNP 272
A H + +A + G+ P
Sbjct: 701 GGYASNGHPREALDLFLAMQAEGMKP 726
>gi|357133649|ref|XP_003568436.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Brachypodium distachyon]
Length = 610
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 170/439 (38%), Positives = 257/439 (58%), Gaps = 15/439 (3%)
Query: 7 VAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV 66
V ++L Y+ +G E ++ R MP R + AW LI+G ++G + + + MR
Sbjct: 172 VMWTALISGYVLNGRSDEALELFRSMPGRTLFAWTALISGFVRSGESVSAVKLFVDMRRD 231
Query: 67 GFR-PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD 125
G D S I ++LA G+Q+H+ ++ G S + V ++++ MYS+C +
Sbjct: 232 GVSIDDAFVLSSAIGGAADLAAHVLGRQLHSLTMRLGFSSSMIVGNAVVDMYSKCSDIHS 291
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
+ + F E D++ W++M+ HG+ EEA +L+++M + N+VTFV L+YACSH
Sbjct: 292 AREVFEEITGRDIISWTTMLVGEAQHGRAEEAFSLYDRMVLAGVKPNEVTFVGLIYACSH 351
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
GL +KG + FD M +Y PRL+HYTC +DLL R G+L EA LI MP + W
Sbjct: 352 AGLVQKGRQLFDSMKGEYGINPRLQHYTCYLDLLSRSGHLAEAEELITTMPYVPDEATWA 411
Query: 246 TLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERN 305
+LLSACK + + +M+ R+A+ +L + P+ + YVLLSN++A +W V R+ M +
Sbjct: 412 SLLSACKKYNNAEMSIRVADNLLELRPKYPSTYVLLSNVYAVNGKWDSVDTVRKLMADME 471
Query: 306 VKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMD 365
++KEPG SW+E+ + F G+ EI +LEEL SEM+ RGYVPDT + MHD++
Sbjct: 472 IRKEPGYSWIEVGREFRLFHAGEVPIDLREEILGFLEELVSEMRQRGYVPDTSSVMHDLE 531
Query: 366 SEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNREIIVR 411
EKE++L HSE+LA+AF G ++ + K+ISEI R+IIVR
Sbjct: 532 EHEKEHHLCLHSERLAVAFGILRSPLGSVIRVVKNLRVCNDCHTVMKFISEIFQRKIIVR 591
Query: 412 DASRFHHFRNGKCSCGDYW 430
DASRFHHF GKCSC ++W
Sbjct: 592 DASRFHHFEGGKCSCSEFW 610
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 84/167 (50%), Gaps = 5/167 (2%)
Query: 8 AGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV- 66
A + L Y KS L + + P R++ + +L+A + + E VL L RM+
Sbjct: 40 APALLVSAYAKSRLLPDTRLLFDETPRRDLHLYSSLLAAVSHSESPELVLPL--LRRMLS 97
Query: 67 --GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
RPD S+ S+ + L +L G+Q+H V + S D V SSLI MY +CG D
Sbjct: 98 ADALRPDHFVLASIASATARLRSLCLGKQLHGHFVASPYSSDDVVKSSLIDMYCKCGVPD 157
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEA 171
D+ K F + V+W+++I+ Y +G+ +EA+ LF M + A
Sbjct: 158 DARKVFDSIVAKNSVMWTALISGYVLNGRSDEALELFRSMPGRTLFA 204
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 88/166 (53%), Gaps = 2/166 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF ++ G+++ MY K + +V + R++I+W T++ G+AQ+G AE+ Y
Sbjct: 268 GFSSSMIVGNAVVDMYSKCSDIHSAREVFEEITGRDIISWTTMLVGEAQHGRAEEAFSLY 327
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVV-KAGASLDVGVISSLISMYSR 119
+ M + G +P+++TFV +I +CS + +G+Q+ + + G + + + + + SR
Sbjct: 328 DRMVLAGVKPNEVTFVGLIYACSHAGLVQKGRQLFDSMKGEYGINPRLQHYTCYLDLLSR 387
Query: 120 CGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQM 164
G L ++ + Y D W+S+++A + E +I + + +
Sbjct: 388 SGHLAEAEELITTMPYVPDEATWASLLSACKKYNNAEMSIRVADNL 433
>gi|125535994|gb|EAY82482.1| hypothetical protein OsI_37700 [Oryza sativa Indica Group]
Length = 584
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 174/446 (39%), Positives = 266/446 (59%), Gaps = 16/446 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D ++L +Y K G L K+ + R+V+AW +I+G QNGLAE ++ Y
Sbjct: 139 GFGSDRFVQTALVVLYSKCGQLPVARKLFDAIRDRSVVAWNAMISGYEQNGLAERAIEVY 198
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M++ PD TFV+ +S+C++ L G+++ +V + V + S+L++MY+RC
Sbjct: 199 REMQVAQVVPDSATFVTTLSACAQAGALDLGREVERRIVSDQMDVSVFLGSALVNMYARC 258
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + F + +VV W+SMIA YG HG G EAI LF M + NDVTFV++L
Sbjct: 259 GLVSKARDWFDRLQERNVVTWTSMIAGYGMHGHGCEAIKLFHLMRLEGPTPNDVTFVAVL 318
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRN-MPVKA 239
AC+H GL +G FD M + Y PR EHY +VD+ GR G LD+A IR+ +P +
Sbjct: 319 AACAHAGLVNEGRSAFDSMKRVYGLVPRAEHYCSMVDMYGRAGLLDDAMQFIRDSIPGEP 378
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
+W +L ACK HK+ ++ +AE ++ + P++ + VLLSNI+A + + V + R
Sbjct: 379 GPEVWTAMLGACKMHKNFNLGVEVAERLIALEPENPSHRVLLSNIYALSGKMNHVEKVRN 438
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M +R +KK+ G S +E+ H F MG+KSH ++ EI YLEEL + GYVP+T +
Sbjct: 439 VMIKRRLKKQIGYSLIELGGTSHLFRMGEKSHQQTREIYQYLEELIHRISDAGYVPETDS 498
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAF-----AEHTRGLIVM----------LPFKYISEIK 404
+H+++ EE+E L++HSEKLA+A+ + T + V+ L K++S ++
Sbjct: 499 VLHELEEEEREVALRYHSEKLAVAYGLMMSSGSTTPIRVIKNLRICGDCHLAIKFMSSVE 558
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
+REIIVRD RFHHF++GKCSC +YW
Sbjct: 559 SREIIVRDKHRFHHFKDGKCSCLEYW 584
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 98/213 (46%), Gaps = 2/213 (0%)
Query: 42 TLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA 101
+L A GL + + Y + F + +C++L+ L G +HA V
Sbjct: 79 SLARAAAHRGLPGEAIAFYGRLLAAALPFSSFAFTAAAKACADLSALRTGMAVHAHSVLL 138
Query: 102 GASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLF 161
G D V ++L+ +YS+CG L + K F VV W++MI+ Y +G E AI ++
Sbjct: 139 GFGSDRFVQTALVVLYSKCGQLPVARKLFDAIRDRSVVAWNAMISGYEQNGLAERAIEVY 198
Query: 162 EQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGR 221
+M+ + + TFV+ L AC+ G + G E +V + + + +V++ R
Sbjct: 199 REMQVAQVVPDSATFVTTLSACAQAGALDLGREVERRIVSD-QMDVSVFLGSALVNMYAR 257
Query: 222 CGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
CG + +A + + N + W ++++ H
Sbjct: 258 CGLVSKARDWFDRLQER-NVVTWTSMIAGYGMH 289
>gi|326497609|dbj|BAK05894.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 170/444 (38%), Positives = 259/444 (58%), Gaps = 15/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
++D+V +SL MY K+G + +V LMP RN ++W LI+ AQ G A++ L +
Sbjct: 234 AMQMDVVISTSLVDMYAKNGLFDQARRVFELMPHRNDVSWSALISQLAQYGNADEALGLF 293
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+M++ G P+ V + +CS+L L G+ IH +++ LD V +++I MYS+C
Sbjct: 294 RMMQVSGLHPNSGPVVGALLACSDLGLLKLGKSIHGFILRT-LELDRMVGTAVIDMYSKC 352
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L + F + D++ W+ MIA G HG+G +A++LF++M++ E + TF SLL
Sbjct: 353 GSLSSAQMLFDKVVSRDLISWNVMIACCGAHGRGRDALSLFQEMKRNEVRPDHATFASLL 412
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
A SH GL E+G +F+ MV +Y +P +H C+VDLL R G ++EA L+ ++ K
Sbjct: 413 SALSHSGLVEEGKFWFNCMVNEYGIEPGEKHLVCIVDLLARSGLVEEANGLVASLHSKPT 472
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
I LLS C + ++ AE+IL + P D L+SN++A+AK W V E R+
Sbjct: 473 ISILVALLSGCLNNNKLELGESTAEKILELQPGDVGVLALVSNLYAAAKNWYKVREVRKL 532
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M++ KK PG S +EI+ +H F M D+SHP+ +I + +L SEM+ GY+P T
Sbjct: 533 MKDHGSKKAPGCSSIEIRGALHTFVMEDQSHPQHRQILQMVMKLDSEMRKMGYIPKTEFV 592
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAF-----AEHTRGLIVML---------PFKYISEIKNR 406
HD++ KE L HSE+LA AF + TR +++ KY+S+I +R
Sbjct: 593 YHDLEEGVKEQLLSRHSERLATAFGLLNTSPGTRLVVIKNLRVCGDCHDAIKYMSKIADR 652
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EI+VRDA RFHHF++G CSCGDYW
Sbjct: 653 EIVVRDAKRFHHFKDGACSCGDYW 676
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 141/313 (45%), Gaps = 7/313 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ D+ SS+ ++Y K G++ + KV M R+ + W T++ G G ++ Y
Sbjct: 133 GYGNDIFVCSSVLNLYAKCGAMDDAVKVFDRMRKRDRVTWSTMVTGFVNAGQPVQAIEMY 192
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
MR G D++ V V+ +C+ G +H +++ +DV + +SL+ MY++
Sbjct: 193 MRMRRDGLEADEVVIVGVMQACAATGDARMGASVHGYLLRHAMQMDVVISTSLVDMYAKN 252
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G D + + F + + V WS++I+ +G +EA+ LF M+ N V L
Sbjct: 253 GLFDQARRVFELMPHRNDVSWSALISQLAQYGNADEALGLFRMMQVSGLHPNSGPVVGAL 312
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACS GL + G +++ + T V+D+ +CG L A L + V +
Sbjct: 313 LACSDLGLLKLGKSIHGFILRTLELDRMVG--TAVIDMYSKCGSLSSAQMLFDKV-VSRD 369
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILG--VNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
I W +++ C H A + +E+ V P A LLS + S +G F
Sbjct: 370 LISWNVMIACCGAHGRGRDALSLFQEMKRNEVRPDHATFASLLSALSHSGLVEEGKFWFN 429
Query: 299 EAMRERNVKKEPG 311
+ E + EPG
Sbjct: 430 CMVNEYGI--EPG 440
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 135/277 (48%), Gaps = 8/277 (2%)
Query: 7 VAGSSLAHMYMKSGSLVEGEKVIRLMPIR--NVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
+ S LA Y ++G L E + P ++ AW L+A ++ + L + +
Sbjct: 37 ILSSCLATAYARAGDLAAAESTLATAPTSPSSIPAWNALLAAHSRGASPHEALRVFRALP 96
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
RPD TF +S+C+ L L G+ + AG D+ V SS++++Y++CG +D
Sbjct: 97 PAA-RPDSTTFTLALSACARLGDLATGEVVTDRASGAGYGNDIFVCSSVLNLYAKCGAMD 155
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D+VK F D V WS+M+ + G+ +AI ++ +M + EA++V V ++ AC+
Sbjct: 156 DAVKVFDRMRKRDRVTWSTMVTGFVNAGQPVQAIEMYMRMRRDGLEADEVVIVGVMQACA 215
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
G G ++ ++ + + T +VD+ + G D+A + MP + N + W
Sbjct: 216 ATGDARMGASVHGYLL-RHAMQMDVVISTSLVDMYAKNGLFDQARRVFELMPHR-NDVSW 273
Query: 245 KTLLSACKTHKSTDMAGRIAE--EILGVNPQDAAPYV 279
L+S + + D A + ++ G++P ++ P V
Sbjct: 274 SALISQLAQYGNADEALGLFRMMQVSGLHP-NSGPVV 309
>gi|297801640|ref|XP_002868704.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
gi|297314540|gb|EFH44963.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
Length = 710
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 158/444 (35%), Positives = 259/444 (58%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF ++ A ++ +MY K G ++ ++V +N++ T++ Q+ E+ L+ +
Sbjct: 267 GFNSEVEASGAIINMYGKCGKVLYAQRVFDNTHAQNIVLNTTIMDAYFQDKSFEEALNLF 326
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M P++ TF ++S +EL+ L G +H V+K+G V V ++L++MY++
Sbjct: 327 SKMDTKEVPPNEYTFAISLNSIAELSLLKHGDLLHGLVLKSGYRNHVMVGNALVNMYAKS 386
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++D+ K F + D+V W++MI + HG G E + F++M N +TF+ +L
Sbjct: 387 GSIEDARKAFSGMTFRDIVTWNTMICGFSHHGLGREGLEAFDRMMIAGEIPNRITFIGVL 446
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH G E+G+ +F+ ++KK+ +P L+HYTC+V LL + G +A +R P++ +
Sbjct: 447 QACSHVGFVEQGLYYFNQLMKKFNVQPDLQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWD 506
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+ W+ LL+AC ++ + ++AE + P D+ YVLLSNIHA ++ W+GV+E R
Sbjct: 507 VVAWRALLNACYVRRNFRLGKKVAEYAIYKYPNDSGVYVLLSNIHAKSREWEGVAEVRSL 566
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M +R VKKEPGVSW+ I+NQ H F + HP I ++E+ S+++ GY PD
Sbjct: 567 MNKRGVKKEPGVSWIGIRNQTHVFLAEENQHPEITLIYAKIKEVLSKIRPLGYSPDVAGV 626
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA----EHTRGLIVM----------LPFKYISEIKNR 406
HD+D E++E NL +HSEKLA+A+ L V K IS+I R
Sbjct: 627 FHDVDEEQREDNLSYHSEKLAVAYGLMKTPENSPLYVTKNVRICDDCHSAIKLISKISKR 686
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
I++RD++RFHHFR+G+CSC DYW
Sbjct: 687 YIVIRDSNRFHHFRDGQCSCCDYW 710
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 125/257 (48%), Gaps = 3/257 (1%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ +SL ++Y+K G V KV LMP RNV++W ++ G +G +VL + M
Sbjct: 68 DVYQINSLINLYVKCGETVRARKVFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMV 127
Query: 65 MVG-FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
RP++ V SCS + +G+Q H +K+G V ++L+ MYS C
Sbjct: 128 FSDESRPNEFVATVVFKSCSSSGRIEEGKQFHGCFLKSGLMSHEFVRNTLVYMYSLCSGN 187
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
++++ + Y D+ ++SS ++ Y G +E + +M +++ +++T++S L C
Sbjct: 188 GEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGAEVLRRMAKEDLVLDNITYLSCLRLC 247
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
S+ + MV + +E ++++ G+CG + A + N + N ++
Sbjct: 248 SNLRDLNLARQIHSRMV-RLGFNSEVEASGAIINMYGKCGKVLYAQRVFDNTHAQ-NIVL 305
Query: 244 WKTLLSACKTHKSTDMA 260
T++ A KS + A
Sbjct: 306 NTTIMDAYFQDKSFEEA 322
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 144/311 (46%), Gaps = 22/311 (7%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L +MY E +V+ +P ++ + + ++G + G ++ + M
Sbjct: 175 NTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGAEVLRRMAKEDLV 234
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
D IT++S + CS L L +QIH+ +V+ G + +V ++I+MY +CG + + +
Sbjct: 235 LDNITYLSCLRLCSNLRDLNLARQIHSRMVRLGFNSEVEASGAIINMYGKCGKVLYAQRV 294
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F ++VL ++++ AY EEA+NLF +M+ KE N+ TF L + + L
Sbjct: 295 FDNTHAQNIVLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAISLNSIAELSLL 354
Query: 190 EKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
+ G L++K YR + + +V++ + G +++A M + + + W T++
Sbjct: 355 KHGDLLHGLVLKSGYRNHVMVGN--ALVNMYAKSGSIEDARKAFSGMTFR-DIVTWNTMI 411
Query: 249 SACKTH-------KSTD---MAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
H ++ D +AG I I + A +V QG+ F
Sbjct: 412 CGFSHHGLGREGLEAFDRMMIAGEIPNRITFIGVLQACSHVGFVE--------QGLYYFN 463
Query: 299 EAMRERNVKKE 309
+ M++ NV+ +
Sbjct: 464 QLMKKFNVQPD 474
>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 878
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 165/458 (36%), Positives = 255/458 (55%), Gaps = 42/458 (9%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L MY + G + ++ ++ R+V++W TLI G G A + M++
Sbjct: 426 NALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEAFQLVTEMQLPSPS 485
Query: 70 ----------------PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSL 113
P+ IT ++++ C+ LA +G++IH V+ D+ V S+L
Sbjct: 486 PSSSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHGYAVRHALESDIAVGSAL 545
Query: 114 ISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQK-EFEAN 172
+ MY++CGCL S F +V+ W+ +I AYG HG G+EA+ LF++M E N
Sbjct: 546 VDMYAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPN 605
Query: 173 DVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALI 232
+VTF++ L ACSH GL ++G+E F M + + KP + + CVVD+LGR G LDEA ++I
Sbjct: 606 EVTFIAALAACSHSGLVDRGLELFHGMERDHGVKPTPDLHACVVDVLGRAGRLDEAYSII 665
Query: 233 RNM-PVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRW 291
+M P + W +LL AC+ H++ ++ AE + + P +A+ YVLL NI+++A W
Sbjct: 666 TSMEPGEQQVSAWSSLLGACRLHRNVELGEVAAERLFELEPGEASHYVLLCNIYSAAGMW 725
Query: 292 QGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLR 351
R MR + V KEPG SW+E+ +H+F G+ SHP S E+ +++ L M+
Sbjct: 726 DKSVAVRVRMRRQGVAKEPGCSWIELDGAIHRFMAGESSHPASAEVHAHMDALWERMRRE 785
Query: 352 GYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP--------------- 396
GY PDT +HD+D +EK L++HSEKLAIAF GL+ P
Sbjct: 786 GYAPDTSCVLHDVDEDEKAAMLRYHSEKLAIAF-----GLLRAPPGAAIRVAKNLRVCND 840
Query: 397 ----FKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
K++S++ R+I++RD RFHHFR+G CSCGDYW
Sbjct: 841 CHEAAKFMSKMVGRDIVLRDVRRFHHFRDGSCSCGDYW 878
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 142/323 (43%), Gaps = 24/323 (7%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMP--IRNVIAWITLIAGKAQNGLAEDVLDQYNLMRM-V 66
S+L MY + + +V ++P R + W +I G AQ G+ E+ L+ ++ M
Sbjct: 322 SALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEA 381
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
G P + T V+ +C+ + +H VVK G + + V ++L+ MY+R G +D +
Sbjct: 382 GCAPSETTMSGVLPACARSEGFAGKEAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVA 441
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQME-----------QKEFEA---- 171
+ F + DVV W+++I G EA L +M+ +E EA
Sbjct: 442 RRIFAMIDPRDVVSWNTLITGCVVQGHAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCM 501
Query: 172 -NDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAA 230
N++T ++LL C+ +G E V ++ + + + +VD+ +CG L + A
Sbjct: 502 PNNITLMTLLPGCAALAAPARGKEIHGYAV-RHALESDIAVGSALVDMYAKCGCLAASRA 560
Query: 231 LIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILG---VNPQDAAPYVLLSNIHAS 287
+ +P + N I W L+ A H D A + +E+ P + L+ S
Sbjct: 561 VFDRLP-RRNVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVTFIAALAACSHS 619
Query: 288 AKRWQGVSEFREAMRERNVKKEP 310
+G+ F R+ VK P
Sbjct: 620 GLVDRGLELFHGMERDHGVKPTP 642
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 118/252 (46%), Gaps = 12/252 (4%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIR------NVIAWITLIAGKAQNGLAEDVLDQYNLM 63
++L MY + G + + + + R +V+ W T+I+ Q G + ++ M
Sbjct: 214 NALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQGGRCAEAVEVLYDM 273
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVK-AGASLDVGVISSLISMYSRCGC 122
+G RPD +TF S + +CS L L G+++HA V+K A + + V S+L+ MY+
Sbjct: 274 VSLGVRPDGVTFASALPACSRLEMLALGREMHAVVLKDADLAANSFVASALVDMYAGNEK 333
Query: 123 LDDSVKTF--LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEA-NDVTFVSL 179
+ + + F + + +W++MI Y G EEA+ LF +ME + A ++ T +
Sbjct: 334 VASARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGV 393
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L AC+ +VK+ R ++D+ R G +D A I M
Sbjct: 394 LPACARSEGFAGKEAMHGYVVKRGMAGNRFVQ-NALMDMYARLGEMD-VARRIFAMIDPR 451
Query: 240 NAIIWKTLLSAC 251
+ + W TL++ C
Sbjct: 452 DVVSWNTLITGC 463
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 82/174 (47%), Gaps = 7/174 (4%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
E D+ GS+L MY K G L V +P RNVI W LI +GL ++ + ++
Sbjct: 535 LESDIAVGSALVDMYAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAVALFD 594
Query: 62 LMRMVG-FRPDKITFVSVISSCSELATLGQGQQI-HAEVVKAGASLDVGVISSLISMYSR 119
M G P+++TF++ +++CS + +G ++ H G + + ++ + R
Sbjct: 595 EMAAGGEATPNEVTFIAALAACSHSGLVDRGLELFHGMERDHGVKPTPDLHACVVDVLGR 654
Query: 120 CGCLDD--SVKTFLECEYSDVVLWSSMIAAYGFHGK---GEEAINLFEQMEQKE 168
G LD+ S+ T +E V WSS++ A H GE A ++E E
Sbjct: 655 AGRLDEAYSIITSMEPGEQQVSAWSSLLGACRLHRNVELGEVAAERLFELEPGE 708
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 81/189 (42%), Gaps = 35/189 (18%)
Query: 109 VISSLISMYSRCG--CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAIN-LFEQME 165
V ++L++ Y+RCG ++ E D V ++S+I+A + E A++ L + +
Sbjct: 102 VGNALLTAYARCGDLDAALALFAATATELRDAVSYNSLISALCLFRQWERALDALRDMLA 161
Query: 166 QKEFEANDVTFVSLLYACSHC---GLKEKGMEFFDLMVKK------YRRKPRLEHYTCVV 216
+ + + T VS+L ACSH + G E +K+ R P + ++
Sbjct: 162 EGRHDVSSFTLVSVLLACSHLPGDDGRRLGREAHAFALKRGFLDEGRERFP----FNALL 217
Query: 217 DLLGRCGYLDEAAALIRNM-----PVKANAIIWKTLLSACKTHKSTDMAGRIAEEI---- 267
+ R G +D+A +L R P + + W T++S GR AE +
Sbjct: 218 SMYARLGLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQ------GGRCAEAVEVLY 271
Query: 268 ----LGVNP 272
LGV P
Sbjct: 272 DMVSLGVRP 280
>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 802
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 163/448 (36%), Positives = 262/448 (58%), Gaps = 24/448 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G ELD V ++L +Y K GSL E + M +++++W T+I ++G ++ +
Sbjct: 226 GLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLF 285
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ G RP++ TF V+++C++LA G+++H + + G S+L+ +YS+C
Sbjct: 286 RDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKC 345
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + + F + D+V W+S+I Y +G+ + A+ FE + + + +++TFV +L
Sbjct: 346 GNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVL 405
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+H GL + G+E+F + +K+ +HY CV+DLL R G EA +I NMP+K +
Sbjct: 406 SACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKEAENIIDNMPMKPD 465
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+W +LL C+ H + ++A R A+ + + P++ A Y+ LSNI+A+A W ++ R
Sbjct: 466 KFLWASLLGGCRIHGNIELAERAAKALFELEPENPATYITLSNIYANAGLWTEETKVRND 525
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M R + K+PG SW+EIK QVH F +GD SHP+ +I YL EL+ +MK GYV DT
Sbjct: 526 MDNRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKISDIHEYLGELSKKMKEEGYVADTNFV 585
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
+HD++ E+KE N+ +HSEKLA+AF G+I P KYIS
Sbjct: 586 LHDVEEEQKEQNIFYHSEKLAVAF-----GIISTSPGTPIKVFKNLRTCVDCHNAMKYIS 640
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDY 429
+I R+IIVRD++RFH F +G CSC DY
Sbjct: 641 KIVQRKIIVRDSNRFHCFVDGSCSCKDY 668
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 135/281 (48%), Gaps = 5/281 (1%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
DL + +++ Y G + + K+ MP R+ +W +I+G G + LD + +M+
Sbjct: 128 DLCSWNTMISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQ 187
Query: 65 -MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
+ T S +++ + +++L +G++IH ++++G LD V ++L+ +Y +CG L
Sbjct: 188 ENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSL 247
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
+++ F + D+V W++MI G+ +E +LF + N+ TF +L AC
Sbjct: 248 NEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNAC 307
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
+ ++ G E M + P + +V + +CG + A + MP + + +
Sbjct: 308 ADLAAEQMGKEVHGYMT-RVGYDPFSFAASALVHVYSKCGNTETARRVFNQMP-RPDLVS 365
Query: 244 WKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLS 282
W +L+ + DMA + E +L G P + +LS
Sbjct: 366 WTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLS 406
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 91/214 (42%), Gaps = 32/214 (14%)
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
+P + ++I++C L G+++HA + + + + LI MY++CG L D+
Sbjct: 60 QPSPRLYSTLIAACLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQM 119
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE-----------------FEA 171
F E D+ W++MI+ Y G+ E+A LF++M ++ EA
Sbjct: 120 LFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEA 179
Query: 172 NDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEH--------------YTCVVD 217
D+ + S+C + R+ + H +T ++D
Sbjct: 180 LDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLD 239
Query: 218 LLGRCGYLDEAAALIRNMPVKANAIIWKTLLSAC 251
L G+CG L+EA + M K + + W T++ C
Sbjct: 240 LYGKCGSLNEARGIFDQMADK-DIVSWTTMIHRC 272
>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
Length = 695
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 163/441 (36%), Positives = 258/441 (58%), Gaps = 15/441 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D V SS+ Y+++G + E KV + ++ + W +I G AQNG ED L ++ M
Sbjct: 255 DQVTASSVLGAYIQAGYIDEARKVFGEIREKDEVCWTIMIVGCAQNGKEEDALLLFSEML 314
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+ RPD T SV+SSC++LA+L GQ +H + G + D+ V S+L+ MY +CG
Sbjct: 315 LENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGVNDDLLVSSALVDMYCKCGVTR 374
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D+ F + +VV W+SMI Y +G+ EA++L+E M ++ + + VTFV +L AC
Sbjct: 375 DAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYENMLEENLKPDSVTFVGVLSACV 434
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL E+G E+F M ++ +P +HY C+V+L GR G++D+A LI +M + N++IW
Sbjct: 435 HAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGRSGHMDKAVDLISSMSQEPNSLIW 494
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
T+LS C A ++ +NP +A PY++LSN++A+ RW+ V+ R M+ +
Sbjct: 495 TTVLSVCVMKGDIKHGEMAARCLIELNPFNAVPYIMLSNMYAARGRWKDVASIRSLMKSK 554
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
+VKK SW+EI N+VH+F D++HP + I + L L +++ G+ P+T +HD
Sbjct: 555 HVKKFSAYSWIEIDNEVHKFVADDRTHPDAKIIHVQLNRLIRKLQEAGFSPNTNLVLHDF 614
Query: 365 DSEEKEYNLKHHSEKLAIAFA----EHTRGLIVMLP-----------FKYISEIKNREII 409
+EK ++ +HSEKLA+A+ H I ++ K++S I R +I
Sbjct: 615 GEDEKLESINYHSEKLALAYGLIKKPHGVTPIRIIKNIRTCADCHIFMKFVSNITRRPVI 674
Query: 410 VRDASRFHHFRNGKCSCGDYW 430
+RD++RFHHF GKCSC DYW
Sbjct: 675 LRDSNRFHHFVEGKCSCKDYW 695
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 109/193 (56%), Gaps = 2/193 (1%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVI-RLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
D + +++ +Y KSG LVE +VI MP R+ +++ T+I+G A NG L + M
Sbjct: 88 DNFSWNAMLSLYAKSG-LVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRM 146
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
+ G +P + T VSV+++C++L L +G+QIH ++ +V V ++L +Y+RCG +
Sbjct: 147 QKEGLKPTEYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEI 206
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
D + + F +VV W+ MI+ Y + + E+ I+LF +M+ + + VT S+L A
Sbjct: 207 DQARRLFDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGAY 266
Query: 184 SHCGLKEKGMEFF 196
G ++ + F
Sbjct: 267 IQAGYIDEARKVF 279
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 86/187 (45%), Gaps = 7/187 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G DL+ S+L MY K G + + M RNV++W ++I G A NG + L Y
Sbjct: 352 GVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLY 411
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVV-KAGASLDVGVISSLISMYSR 119
M +PD +TFV V+S+C + +G++ + + G + +++++ R
Sbjct: 412 ENMLEENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGR 471
Query: 120 CGCLDDSVKTFLE-CEYSDVVLWSSMIAAYGFHGK---GEEAINLFEQMEQKEFEANDVT 175
G +D +V + + ++W+++++ G GE A +E F A
Sbjct: 472 SGHMDKAVDLISSMSQEPNSLIWTTVLSVCVMKGDIKHGEMAARCL--IELNPFNAVPYI 529
Query: 176 FVSLLYA 182
+S +YA
Sbjct: 530 MLSNMYA 536
>gi|115441047|ref|NP_001044803.1| Os01g0848300 [Oryza sativa Japonica Group]
gi|15408890|dbj|BAB64281.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113534334|dbj|BAF06717.1| Os01g0848300 [Oryza sativa Japonica Group]
gi|125572632|gb|EAZ14147.1| hypothetical protein OsJ_04076 [Oryza sativa Japonica Group]
Length = 660
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 174/447 (38%), Positives = 261/447 (58%), Gaps = 18/447 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ L ++L Y K G + E V MP RNV++W +I A+N D + +
Sbjct: 215 GYGLHTHVATTLIDCYAKLGIVSYAESVFATMPERNVVSWTAMIGCYAKNERPGDAILLF 274
Query: 61 NLMRMVG--FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
M P+ +T V ++ + + + LGQG+ +HA +++ G V V+++L++MY
Sbjct: 275 QEMVASDEDLVPNSVTIVCILHAFAGVNALGQGKLLHAYILRRGFDSLVSVLNALMAMYM 334
Query: 119 RCGCLDDSVKTF-LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
+CGCL+ F L DVV W+++I+ YG HG G EA+ +FE M Q N +TF+
Sbjct: 335 KCGCLEAGRHIFDLIGHRKDVVSWNTLISGYGMHGFGHEAVQVFEDMTQMGVSPNIITFI 394
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
S+L ACSH GL ++G F+ MV Y PR EHY C+VDLLGR G+LDEA LI+ M +
Sbjct: 395 SVLGACSHAGLVDEGKRLFESMVD-YNVTPRAEHYACMVDLLGRAGHLDEAVELIQGMHI 453
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEF 297
+ + +W +LL AC+ H+ + A ++ + P++A YVLL++I+A AK V
Sbjct: 454 RPSPQVWGSLLGACRIHRHVEYAEMACSQLFDLEPRNAGNYVLLADIYARAKLHSEVGVL 513
Query: 298 REAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDT 357
++ + E ++K PG SW+E+K ++H F D +P+ E+ + E ++MK GYVPDT
Sbjct: 514 KDLLEEHALEKVPGCSWIEVKKRLHMFVSVDNKNPQIEELQALIGEFVTQMKNDGYVPDT 573
Query: 358 GADMHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVMLP------------FKYISEI 403
GA ++D++ EEKE L HSEKLA+AF RG ++ + K+IS+
Sbjct: 574 GAVLYDIEEEEKEKILLGHSEKLAVAFGLINTGRGEVIRITKNLRLCEDCHSVTKFISKY 633
Query: 404 KNREIIVRDASRFHHFRNGKCSCGDYW 430
REIIVRD +RFHHFR+G CSCGDYW
Sbjct: 634 AEREIIVRDVNRFHHFRDGICSCGDYW 660
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 121/285 (42%), Gaps = 18/285 (6%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F D + L Y G L +V P++++ W L+ A E+ L +
Sbjct: 110 FRSDPFLSTRLIDAYASLGELPAARQVFDEAPVKSIFVWNALLKALALADHGEEALARLA 169
Query: 62 LMRMVGFRPDKITFVSVISSC-----SELATLGQGQQIHAEVVKAGASLDVGVISSLISM 116
M + D ++ + +C S + ++IHA V+ G L V ++LI
Sbjct: 170 DMGRLRVPVDSYSYAHGLKACIAASTSHVPASALVREIHAHAVRRGYGLHTHVATTLIDC 229
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM--EQKEFEANDV 174
Y++ G + + F +VV W++MI Y + + +AI LF++M ++ N V
Sbjct: 230 YAKLGIVSYAESVFATMPERNVVSWTAMIGCYAKNERPGDAILLFQEMVASDEDLVPNSV 289
Query: 175 TFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLL----GRCGYLDEAAA 230
T V +L+A + +G ++ Y + + V++ L +CG L+
Sbjct: 290 TIVCILHAFAGVNALGQGK-----LLHAYILRRGFDSLVSVLNALMAMYMKCGCLEAGRH 344
Query: 231 LIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQ 273
+ + + + + W TL+S H A ++ E++ +GV+P
Sbjct: 345 IFDLIGHRKDVVSWNTLISGYGMHGFGHEAVQVFEDMTQMGVSPN 389
>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
Length = 664
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 167/445 (37%), Positives = 253/445 (56%), Gaps = 18/445 (4%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIR----NVIAWITLIAGKAQNGLAEDVLDQ 59
+D+ + ++L ++ + E ++ R R NV++W +++A QNG + +D
Sbjct: 220 MDVASCNALVAGLSRNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDL 279
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ M+ G P+ +T V+ + + +A L G+ H ++ G D+ V S+L+ MY++
Sbjct: 280 FREMQSEGIEPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAK 339
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG + D+ F Y +VV W++MI Y HG+ E A+ LF M+ + + + VTF +
Sbjct: 340 CGRVRDARMIFEAMPYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCV 399
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L ACS G E+G +F+ M K+ PR+EHY C+V LLGR G LD+A +I MP +
Sbjct: 400 LGACSQAGWTEEGRSYFNEMQHKHGISPRMEHYACMVTLLGRAGKLDDAYDIINQMPFEP 459
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
+ IW +LL +C+ H + +A AE + + P++A YVLLSNI+AS K W GV+ R+
Sbjct: 460 DGCIWGSLLGSCRVHGNVVLAEVAAENLFQLEPENAGNYVLLSNIYASKKMWDGVNRLRD 519
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M+ +KKE G SW+EIKN+VH GD SHP I L+ LT EM+ G+ P T
Sbjct: 520 MMKTVGLKKEKGCSWIEIKNKVHMLLAGDSSHPMMAAITEKLKHLTMEMRRLGFAPSTDY 579
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFA----EHTRGLIVML----------PFKYISEIKN 405
+HD++ +EK+ L HSEKLA+A H L V+ K+IS +
Sbjct: 580 VLHDVEEQEKDDILSVHSEKLAVALGLISTSHGTPLQVIKNLRICGDCHEAMKFISSFER 639
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
REI VRD +RFHHF++GKCSC DYW
Sbjct: 640 REIYVRDTNRFHHFKDGKCSCADYW 664
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 136/344 (39%), Gaps = 94/344 (27%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D SSL H Y++ G+ + V+ MP R V+ W LIA A +G AE
Sbjct: 50 GVSRDAFVASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLL 109
Query: 61 NLMRMVGFRPDKITFVSVIS------------------------------SCS-----EL 85
MR G P+ IT+ ++S SC+ ++
Sbjct: 110 ERMRSDGVEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDV 169
Query: 86 ATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSD-------- 137
+ G+Q+H VVKAG LD V ++LI MY +CG D+ V+ F E + D
Sbjct: 170 GDVAVGEQLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALV 229
Query: 138 ---------------------------VVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFE 170
VV W+S++A +G+ EA++LF +M+ + E
Sbjct: 230 AGLSRNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIE 289
Query: 171 ANDVTFVSLLYA-----------CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLL 219
N VT +L A +HC KG D+ V + +VD+
Sbjct: 290 PNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFH-HDIYVG-----------SALVDMY 337
Query: 220 GRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRI 263
+CG + +A + MP + N + W ++ H + A R+
Sbjct: 338 AKCGRVRDARMIFEAMPYR-NVVSWNAMIGGYAMHGEAENAVRL 380
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 92/185 (49%), Gaps = 3/185 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D+ GS+L MY K G + + + MP RNV++W +I G A +G AE+ + +
Sbjct: 322 GFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYRNVVSWNAMIGGYAMHGEAENAVRLF 381
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVV-KAGASLDVGVISSLISMYSR 119
M+ +PD +TF V+ +CS+ +G+ E+ K G S + + ++++ R
Sbjct: 382 RSMQSSKEKPDLVTFTCVLGACSQAGWTEEGRSYFNEMQHKHGISPRMEHYACMVTLLGR 441
Query: 120 CGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFE-ANDVTFV 177
G LDD+ + + D +W S++ + HG A E + Q E E A + +
Sbjct: 442 AGKLDDAYDIINQMPFEPDGCIWGSLLGSCRVHGNVVLAEVAAENLFQLEPENAGNYVLL 501
Query: 178 SLLYA 182
S +YA
Sbjct: 502 SNIYA 506
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 113/269 (42%), Gaps = 29/269 (10%)
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
N +R V F PD S + SCS L + +HA AG S D V SSL+ Y R
Sbjct: 12 NFLRHVSFPPDPRLLPSALKSCSALRLA---RALHAAAAVAGVSRDAFVASSLLHAYLRF 68
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G D+ + VV WS++IAA+ HG E A L E+M E N +T+ L+
Sbjct: 69 GATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLLERMRSDGVEPNVITWNGLV 128
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRK--PRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+ G + + +V+ + P +C + +G G + L VK
Sbjct: 129 SGLNRSG---RARDAVLALVRMHGEGFLPDATGVSCALSAVGDVGDVAVGEQL-HGYVVK 184
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRI--AEEILGVNPQD-----AAPYVLLSNIHASAKRW 291
A L AC DM G+ A+EI+ V + A+ L++ + +A+
Sbjct: 185 AGC-----RLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVAGLSRNAQVS 239
Query: 292 QGVSEFREAMR---ERNVKKEPGVSWLEI 317
+ + FRE + E NV VSW I
Sbjct: 240 EALRLFREFVGRGIELNV-----VSWTSI 263
>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
Length = 1108
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 170/450 (37%), Positives = 256/450 (56%), Gaps = 29/450 (6%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E D+ ++L +MY G E M R++++W + A AQ GLA++ + +
Sbjct: 668 GLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLF 727
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M++ G +PDK+TF + ++ A + G+ HA ++G DV V + L+ +Y++C
Sbjct: 728 RQMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHALAAESGLDSDVSVATGLVKLYAKC 787
Query: 121 GCLDDSVKTFL-ECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G LD+++ F C+++ VVL +++I A HG EEA+ +F +M+Q+ + T VS+
Sbjct: 788 GKLDEAMSLFRGACDWT-VVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSI 846
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
+ AC H G+ E+G F M + + P LEHY C VDLLGR G L+ A +IR MP +
Sbjct: 847 ISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFED 906
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
N ++W +LL CK ++ R A+ IL ++P ++A +V+LSNI+ + +W+ R+
Sbjct: 907 NTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYCATGKWKDADVDRK 966
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M + NVK PG+SW EI QVH+F GD+SHP++ EI + L++L M+ GY D G
Sbjct: 967 KMLDENVKNAPGMSWFEIGKQVHEFVAGDRSHPKTDEIYVVLDKLELLMRRAGYEADKGL 1026
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYI 400
D+ D E KE L +HSE++AIAF GLI P KYI
Sbjct: 1027 DVED---ELKEKALGYHSERIAIAF-----GLIATPPETTLKIVKNLRVCGDCHTATKYI 1078
Query: 401 SEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
S + REIIVRD+ RFHHF NG CSC D W
Sbjct: 1079 SMVMGREIIVRDSLRFHHFSNGTCSCKDCW 1108
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 141/292 (48%), Gaps = 8/292 (2%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L M+ + L + V M +V++W +++ A+N ++V + + M++ G
Sbjct: 576 TALISMHGRCRELEQARSVFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVI 635
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
PDK T + + +C TLG G+ IHA V + G D+ V ++L++MYS CG +++
Sbjct: 636 PDKFTLATTLDTCLASTTLGLGKVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSF 695
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F + D+V W+ M AAY G +EA+ LF QM+ + + + +TF + L L
Sbjct: 696 FETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALV 755
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRN----MPVKANAIIWK 245
G + F + + + T +V L +CG LDEA +L R V NAII
Sbjct: 756 SDG-KLFHALAAESGLDSDVSVATGLVKLYAKCGKLDEAMSLFRGACDWTVVLLNAII-G 813
Query: 246 TLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEF 297
L + ++ M ++ +E GV P A ++S + +G S F
Sbjct: 814 ALAQHGFSEEAVKMFWKMQQE--GVRPDVATLVSIISACGHAGMVEEGCSSF 863
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 145/292 (49%), Gaps = 8/292 (2%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIR---NVIAWITLIAGKAQNGLAEDVLDQY 60
D +A ++L +MY K G V + M R ++++W +I+ + G D + +
Sbjct: 263 FDPLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIF 322
Query: 61 NLMRMVGFRPDKITFVSVISSCSELAT-LGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+R+ G RP+ +T ++++++ + G + H + ++G DV + +++ISMY++
Sbjct: 323 RRLRLEGMRPNSVTLITILNALAASGVDFGAARGFHGRIWESGYLRDVVIGNAIISMYAK 382
Query: 120 CGCLDDSVKTFLECEYS-DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
CG + F + DV+ W++M+ A + +N F M + N V+F++
Sbjct: 383 CGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIA 442
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+L ACS+ + G + L++ + R T +V + G+CG + EA + + MP+
Sbjct: 443 ILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSISEAELVFKEMPLP 502
Query: 239 ANAII-WKTLLSA-CKTHKSTDMAGRIAEEILGVNPQDAAPYV-LLSNIHAS 287
+ +++ W +L A + +S + G + E + G DA + +LS+ + S
Sbjct: 503 SRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCS 554
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 130/266 (48%), Gaps = 28/266 (10%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E L G+ L +MY++ GSL E + M RNV++W LI+ AQ G +
Sbjct: 55 GLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEERNVVSWTALISANAQCGAFARAFALF 114
Query: 61 NLMRM-VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAG---ASLDVGVI-SSLIS 115
M + P+ T V+++++C+ L G+ IHA + + G AS ++ +++I+
Sbjct: 115 RTMLLESSAAPNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMIN 174
Query: 116 MYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKG-EEAINLFEQMEQKEFEANDV 174
MY++CG L+D++ FL DVV W++M AY + +A+ +F +M + N +
Sbjct: 175 MYAKCGSLEDAIAVFLAIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVI 234
Query: 175 TFVSLLYACS--------HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLD 226
TF++ L AC+ H L E + F L ++++ G+CG +
Sbjct: 235 TFITALGACTSLRDGTWLHSLLHEASLGFDPLASNA------------LINMYGKCGDWE 282
Query: 227 EAAALIRNMPVKA--NAIIWKTLLSA 250
A ++ + M + + + W ++SA
Sbjct: 283 GAYSVFKAMASRQELDLVSWNAMISA 308
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 133/259 (51%), Gaps = 10/259 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIR-NVIAWITLIAGKAQNGLAEDVLDQ 59
G+ D+V G+++ MY K G V R + + +VI+W T++ V++
Sbjct: 365 GYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNT 424
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVV-KAGASLDVGVISSLISMYS 118
++ M + G P+K++F++++++CS L G++IH+ ++ + ++ V + L+SMY
Sbjct: 425 FHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYG 484
Query: 119 RCGCLDDSVKTFLECEYS--DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
+CG + ++ F E +V W+ M+ AY + + +EA +M Q + ++F
Sbjct: 485 KCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSF 544
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
S+L +C +C + + + +++ R LE T ++ + GRC L++A ++ M
Sbjct: 545 TSVLSSC-YCSQEAQVLRM--CILESGYRSACLE--TALISMHGRCRELEQARSVFNEMD 599
Query: 237 VKANAIIWKTLLSACKTHK 255
+ + W ++SA ++
Sbjct: 600 -HGDVVSWTAMVSATAENR 617
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 117/280 (41%), Gaps = 45/280 (16%)
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
+ +++ SC + L +G+ H + AG + + + LI+MY RCG L+++ F + E
Sbjct: 28 YTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKME 87
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEA-NDVTFVSLLYACS--------- 184
+VV W+++I+A G A LF M + A N T V++L AC+
Sbjct: 88 ERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGR 147
Query: 185 --HCGLKEKGME--------FFDLMVKKYRRKPRLEHYTC---------VVDLLGRCG-- 223
H + E G+E + M+ Y + LE VV G
Sbjct: 148 SIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTAMAGAY 207
Query: 224 -----YLDEAAALIRNM---PVKANAIIWKTLLSACKTHK-STDMAGRIAEEILGVNPQD 274
+ +A + R M P+ N I + T L AC + + T + + E LG +P
Sbjct: 208 AQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRDGTWLHSLLHEASLGFDPLA 267
Query: 275 AAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSW 314
+ + N++ W+G +AM R ++ VSW
Sbjct: 268 SNALI---NMYGKCGDWEGAYSVFKAMASR--QELDLVSW 302
>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
Length = 679
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 161/423 (38%), Positives = 262/423 (61%), Gaps = 14/423 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G++ D+ GSSL MY K + + +V ++P + I+W ++IAG QNG+ ++ L +
Sbjct: 226 GYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFF 285
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M + +P+ ++F S++ +C+ L TL G+Q+H ++++ +V + S+L+ MY++C
Sbjct: 286 QQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKC 345
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + F + E D+V W++MI Y HG +AI+LF++ME + + N V F+++L
Sbjct: 346 GNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVL 405
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL ++ ++F+ M + YR P LEHY V DLLGR G L+EA I +M ++
Sbjct: 406 TACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPT 465
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+W TLL+AC+ HK+ ++A ++++++ V+PQ+ YVLLSNI+++A RW+ + R A
Sbjct: 466 GSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIA 525
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
MR++ +KK+P SW+EIKN+VH F GDKSHP I+ L+ L +M+ GYV DT
Sbjct: 526 MRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQMEREGYVLDTTEV 585
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA----------EHTRGLIVML----PFKYISEIKNR 406
+HD++ E+K Y L HSE+LAI F T+ L V + K+IS+I R
Sbjct: 586 LHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTKNLRVCVDCHTATKFISKIVGR 645
Query: 407 EII 409
EI+
Sbjct: 646 EIV 648
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 133/265 (50%), Gaps = 7/265 (2%)
Query: 20 GSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVI 79
GSL KV +MP R++++W T+I+G AQNG+ ED L M RPD T SV+
Sbjct: 147 GSL---RKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVL 203
Query: 80 SSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVV 139
+E L +G++IH ++ G DV + SSLI MY++C +DDS + F D +
Sbjct: 204 PIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGI 263
Query: 140 LWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLM 199
W+S+IA +G +E + F+QM + + N V+F S++ AC+H G + +
Sbjct: 264 SWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYI 323
Query: 200 VKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDM 259
++ R + + +VD+ +CG + A + M + + + W ++ H
Sbjct: 324 IRS-RFDGNVFIASALVDMYAKCGNIRTARWIFDKMEL-YDMVSWTAMIMGYALHGHAYD 381
Query: 260 AGRIAE--EILGVNPQDAAPYVLLS 282
A + + E+ GV P A +L+
Sbjct: 382 AISLFKRMEVEGVKPNYVAFMAVLT 406
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 35/63 (55%)
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M G PD F SV+ SC+ + L G+ +H +++ G D+ ++L++MYS+
Sbjct: 1 MLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWS 60
Query: 123 LDD 125
L++
Sbjct: 61 LEE 63
>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
Length = 1145
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 169/441 (38%), Positives = 249/441 (56%), Gaps = 25/441 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D V+ +S +++ E V MP +V++W T+I+ AQ + ++ + M
Sbjct: 483 DTVSYNSFMSALVQNNLFDEARDVFNNMPSPDVVSWTTIISACAQADQGNEAVEIFRSML 542
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
P+ ++ L GQQIH +K G + V ++L+SMY +C D
Sbjct: 543 HERELPNPPILTILLGLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSSAD 602
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
S+K F E D+ W+++I Y HG G EAI +++ M N+VTFV LL+ACS
Sbjct: 603 -SLKVFDSMEERDIFTWNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACS 661
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL ++G +FF M Y P LEHY C+VDLLGR G + A I +MP++ +++IW
Sbjct: 662 HSGLVDEGHQFFKSMSSDYGLTPLLEHYACMVDLLGRAGDVQGAEHFIYDMPIEPDSVIW 721
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
LL ACK HK+ ++ R AE++ + P +A YV+LSNI++S W V++ R+ M+ER
Sbjct: 722 SALLGACKIHKNVEIGRRAAEKLFSIEPSNAGNYVMLSNIYSSQGMWDEVAKVRKLMKER 781
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
V K+PG SW++IKN++H F GD+ H + I L EL + +K GYVPDT +HD+
Sbjct: 782 GVNKDPGCSWMQIKNKMHSFVTGDEEHEQIQNIYATLWELYTLLKATGYVPDTDFVLHDI 841
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVM---LP----------------FKYISEIKN 405
D E+KE +L +HSEKLA+A+ GL+V +P K++S +
Sbjct: 842 DEEQKESSLLYHSEKLAVAY-----GLLVTPKGMPIQIMKNLRICGDCHTFIKFVSSVTK 896
Query: 406 REIIVRDASRFHHFRNGKCSC 426
REI VRD +RFHHFRNG CSC
Sbjct: 897 REIDVRDGNRFHHFRNGSCSC 917
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 108/221 (48%), Gaps = 5/221 (2%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E ++V+ +++ YM++ + E E + MP RN I+W +IAG A+NG +E L
Sbjct: 349 EPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQALVSLQA 408
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
+ G P + S +CS + L G+Q+H+ VKAG + V ++LI++Y +
Sbjct: 409 LHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRS 468
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
+ + F D V ++S ++A + +EA ++F M + V++ +++ A
Sbjct: 469 IGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNMPSPDV----VSWTTIISA 524
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCG 223
C+ + +E F M+ + R P T ++ L G G
Sbjct: 525 CAQADQGNEAVEIFRSMLHE-RELPNPPILTILLGLSGNLG 564
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 121/301 (40%), Gaps = 44/301 (14%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGE-KVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQ 59
GFE D+V G+++ + Y K ++++ K M RN W T+IA +Q G +D
Sbjct: 253 GFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAV 312
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVIS--SLISMY 117
Y + SV S S L L + +I + + V+S ++I+ Y
Sbjct: 313 YQ----------RDPLKSVPSRTSMLTGLARYGRIDDAKILFDQIHEPNVVSWNAMITGY 362
Query: 118 SRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
+ +D++ F + + + W+ MIA Y +G+ E+A+ + + +K + +
Sbjct: 363 MQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLT 422
Query: 178 SLLYACSHCGLKEKGMEFFDLMVK------------------KYRRKPRLEH-------- 211
S +ACS+ E G + L VK KYR +
Sbjct: 423 SSFFACSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVK 482
Query: 212 ----YTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEI 267
Y + L + DEA + NMP + + W T++SAC + A I +
Sbjct: 483 DTVSYNSFMSALVQNNLFDEARDVFNNMP-SPDVVSWTTIISACAQADQGNEAVEIFRSM 541
Query: 268 L 268
L
Sbjct: 542 L 542
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 117/260 (45%), Gaps = 17/260 (6%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKA---QNGLAEDVLDQYN 61
D+ + +++ Y S + E + MP RN ++W +I+G Q+G A D +
Sbjct: 156 DVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRA---WDMFR 212
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR-C 120
M G P++ VSV+S+ L G + IH V K G DV V +++++ Y++
Sbjct: 213 TMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDV 272
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
LD +VK F + WS++IAA G+ ++A ++++ K + S+L
Sbjct: 273 NMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSVPSR----TSML 328
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
+ G + FD + +P + + ++ + +DEA L MP + N
Sbjct: 329 TGLARYGRIDDAKILFDQI-----HEPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFR-N 382
Query: 241 AIIWKTLLSACKTHKSTDMA 260
I W +++ + ++ A
Sbjct: 383 TISWAGMIAGYARNGRSEQA 402
>gi|359495686|ref|XP_003635058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Vitis vinifera]
Length = 540
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 173/443 (39%), Positives = 253/443 (57%), Gaps = 16/443 (3%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
FE L+ G L +Y G + + MP + +W T+++G +QNG A + L
Sbjct: 100 FETPLLNG--LIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSGYSQNGQAVETLKLLR 157
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M+ D T SV+ C +L L G+ +H+ + K G +DV + ++L+ MYS+CG
Sbjct: 158 EMQAENVSSDAFTLASVVGVCGDLGVLDLGKWVHSYIDKEGVKIDVVLGTALVGMYSKCG 217
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
LD+++K F DV WS MIA Y HG E+A+ LF+ M++ + N VTF S+L
Sbjct: 218 SLDNALKVFQGMAERDVTTWSIMIAGYAIHGHDEKALQLFDAMKRSKIIPNCVTFTSVLS 277
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
A SH GL EKG + F+ M +Y+ P+++HY C+VDL R G + A I+ MP++ N
Sbjct: 278 AYSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQTMPIEPNV 337
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
++W+TLL ACKTH + I+ +IL ++P YV +SN++AS RW V + R M
Sbjct: 338 VLWRTLLGACKTHGYKGLGEHISRKILKLDPSSPENYVFVSNVYASLGRWSSVCQVRSLM 397
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
+E+ KK+ G S +EI VH+F MG++SHP+ +I L ++ ++K G+V T +
Sbjct: 398 KEKAPKKQHGWSSIEINFMVHKFIMGEESHPKREKIYGMLHQMARKLKQVGHVASTVDVL 457
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFA-EHT-RGLIVML------------PFKYISEIKNRE 407
HD+D EEKEY L HSE+LAIA+ HT G + + K ISE+ NRE
Sbjct: 458 HDIDEEEKEYALGLHSERLAIAYGLLHTPNGSPIRIVKNLRACRDCHEVIKLISEVYNRE 517
Query: 408 IIVRDASRFHHFRNGKCSCGDYW 430
II+RD FHHFR CSC DYW
Sbjct: 518 IILRDRVCFHHFRERGCSCNDYW 540
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 113/225 (50%), Gaps = 2/225 (0%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
N+ W T+I G + + + Y M + G P+ TF V+++C +L L +GQ++H
Sbjct: 31 NLFMWNTIIRGYSISDSPISAIALYKDMFLCGISPNSYTFGFVLNACCKLLRLCEGQELH 90
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGE 155
+++VKAG + +++ LI +Y+ CGC+D + F E D WS+M++ Y +G+
Sbjct: 91 SQIVKAGLDFETPLLNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSGYSQNGQAV 150
Query: 156 EAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV 215
E + L +M+ + ++ T S++ C G+ + G ++ + K K + T +
Sbjct: 151 ETLKLLREMQAENVSSDAFTLASVVGVCGDLGVLDLG-KWVHSYIDKEGVKIDVVLGTAL 209
Query: 216 VDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMA 260
V + +CG LD A + + M + + W +++ H + A
Sbjct: 210 VGMYSKCGSLDNALKVFQGM-AERDVTTWSIMIAGYAIHGHDEKA 253
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 95/188 (50%), Gaps = 9/188 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G ++D+V G++L MY K GSL KV + M R+V W +IAG A +G E L +
Sbjct: 198 GVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTTWSIMIAGYAIHGHDEKALQLF 257
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEV-VKAGASLDVGVISSLISMYSR 119
+ M+ P+ +TF SV+S+ S + +G QI + + + + ++ ++ R
Sbjct: 258 DAMKRSKIIPNCVTFTSVLSAYSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCR 317
Query: 120 CGCLDDSVKTFLECEY--SDVVLWSSMIAA---YGFHGKGEEAINLFEQMEQKEFEANDV 174
G + + K F++ +VVLW +++ A +G+ G GE +++ E +
Sbjct: 318 AGMVGHAHK-FIQTMPIEPNVVLWRTLLGACKTHGYKGLGEHISRKILKLDPSSPE--NY 374
Query: 175 TFVSLLYA 182
FVS +YA
Sbjct: 375 VFVSNVYA 382
>gi|195611854|gb|ACG27757.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 633
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 166/451 (36%), Positives = 257/451 (56%), Gaps = 31/451 (6%)
Query: 6 LVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRM 65
+V+ +++ Y K G L + + +P ++++ W ++ G Q+G + L + M
Sbjct: 188 VVSVTAMLSCYAKMGQLDDARGLFDALPRKDLVCWNAMMDGYTQHGRPSEALRLFRQMLR 247
Query: 66 VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAG----ASLDVGVISSLISMYSRCG 121
G PD+++ V +S+ ++L T G+ +H+ V G L+ V ++L+ MY +CG
Sbjct: 248 SGVEPDEVSVVLALSAVAQLGTAESGRWLHSFVANGGRRARVRLNARVGTALVDMYYKCG 307
Query: 122 CLDDSVKTFLECEYS---DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
L+++V F + DVV W++MI Y HG+ EA+ F Q+ + D+TF+
Sbjct: 308 SLEEAVAVFRDLGGGGDRDVVAWNAMINGYAMHGRSREALEAFGQLRAQGLWPTDITFIG 367
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+L ACSH GL ++G F M ++Y P++EHY C+VDLLGR G ++EA L+++M K
Sbjct: 368 VLNACSHSGLVDEGRALFAAMEEEYGIVPKVEHYGCMVDLLGRAGRVEEAFDLVQSMKAK 427
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
+A +W +LL AC+ HK+ + R+A+ ++G ++ YVLLSN++A+A +W+ V R
Sbjct: 428 PDAAMWASLLGACRLHKNLALGQRVADYLVGNGLANSGTYVLLSNMYAAAGKWREVGRVR 487
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
MR V+KEPG S +E+ +V +F GD+SHPRS EI LEE+ S + RG+VP T
Sbjct: 488 SMMRASGVQKEPGCSAVEVGRRVVEFVAGDRSHPRSAEIYAKLEEVNSIARARGHVPHTE 547
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKY 399
+HD+D KE L HSEKLA+AF GLI P K
Sbjct: 548 LVLHDLDDAAKERALAVHSEKLALAF-----GLISTPPRTGIKIVKNLRACADCHAVLKL 602
Query: 400 ISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+SE R+I+ RD +RFHHF +G CSCGDYW
Sbjct: 603 VSEATGRKIVFRDRNRFHHFVDGSCSCGDYW 633
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 114/282 (40%), Gaps = 42/282 (14%)
Query: 12 LAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN--LMRMVGFR 69
L Y SG L ++R P + + + I + GL L + L+ G
Sbjct: 62 LQRAYAASGRLDLAVALLRRTPDPTAVFYTSAIHAHSSRGLHRAALALLSEMLLSRHGLL 121
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISM------------- 116
P T + + +C LA G+ +H VK S + V ++L+ M
Sbjct: 122 PTAHTLSASLPACGCLAV---GRALHGYAVKLALSGEPYVATALLGMYARAGEAAAARAL 178
Query: 117 -------------------YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEA 157
Y++ G LDD+ F D+V W++M+ Y HG+ EA
Sbjct: 179 FDGMRPDPHVVSVTAMLSCYAKMGQLDDARGLFDALPRKDLVCWNAMMDGYTQHGRPSEA 238
Query: 158 INLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRR-KPRLEHY--TC 214
+ LF QM + E ++V+ V L A + G E G + RR + RL T
Sbjct: 239 LRLFRQMLRSGVEPDEVSVVLALSAVAQLGTAESGRWLHSFVANGGRRARVRLNARVGTA 298
Query: 215 VVDLLGRCGYLDEAAALIRNMPVKA--NAIIWKTLLSACKTH 254
+VD+ +CG L+EA A+ R++ + + W +++ H
Sbjct: 299 LVDMYYKCGSLEEAVAVFRDLGGGGDRDVVAWNAMINGYAMH 340
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 76/154 (49%), Gaps = 5/154 (3%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLM---PIRNVIAWITLIAGKAQNGLAEDVLDQ 59
L+ G++L MY K GSL E V R + R+V+AW +I G A +G + + L+
Sbjct: 290 RLNARVGTALVDMYYKCGSLEEAVAVFRDLGGGGDRDVVAWNAMINGYAMHGRSREALEA 349
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYS 118
+ +R G P ITF+ V+++CS + +G+ + A + + G V ++ +
Sbjct: 350 FGQLRAQGLWPTDITFIGVLNACSHSGLVDEGRALFAAMEEEYGIVPKVEHYGCMVDLLG 409
Query: 119 RCGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFH 151
R G ++++ + D +W+S++ A H
Sbjct: 410 RAGRVEEAFDLVQSMKAKPDAAMWASLLGACRLH 443
>gi|224136143|ref|XP_002322250.1| predicted protein [Populus trichocarpa]
gi|222869246|gb|EEF06377.1| predicted protein [Populus trichocarpa]
Length = 548
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 162/446 (36%), Positives = 254/446 (56%), Gaps = 27/446 (6%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ +L MY K GS+ + V MP + + W T+IAG A +G +E+ LD Y MR
Sbjct: 110 DIFVSCALIDMYSKCGSIEDARFVFEEMPEKTTVGWNTIIAGYALHGYSEEALDMYYEMR 169
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G + D TF ++ C+ LA++ +Q HA +++ G D+ ++L+ YS+ G ++
Sbjct: 170 DSGVKMDHFTFSMIVRICARLASVEHAKQAHAALIRHGFGSDIVANTALVDFYSKWGRIE 229
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D+ F + +V+ W+++I YG HG+G EA+ LFEQM Q+ N +TF+++L ACS
Sbjct: 230 DARHVFDKMASKNVISWNALIGGYGNHGRGSEAVELFEQMIQERMNPNHITFLAVLSACS 289
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL E+G E F M + R KPR HY C+++L+GR G LDEA ALIR P K A +W
Sbjct: 290 HSGLSERGWEIFQSMGRDNRIKPRAMHYACMIELMGREGLLDEALALIRGAPFKPTANMW 349
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
LL+AC+ +++ ++ AE++ G+ P Y++L NI+ SA + ++ ++ +
Sbjct: 350 AALLTACRVNENFELGKFAAEKLYGMEPDKLNNYIVLLNIYNSAGNLKEAADVVHTLKRK 409
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
++ P SW+E+K + H F GD HP+ EI +++L E+ GYVP+ + D+
Sbjct: 410 GLRMRPVCSWIEVKRRPHVFLSGDNRHPQRKEIYQKVDKLMLEISKYGYVPNQKTLLPDV 469
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPF--------------------KYISEIK 404
D +E+ L +HSEKLAIAF ++ P+ K I+ +
Sbjct: 470 DEQEERVRL-YHSEKLAIAFG------LISTPYWAPLQIVQGHRICGDCHEAIKLIARVT 522
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
REI++RDA RFHHF++G CSC DYW
Sbjct: 523 GREIVIRDAGRFHHFKHGHCSCEDYW 548
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 147/312 (47%), Gaps = 10/312 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE D + + M++K G +++ ++ MP RN+++W T+I+G G D ++ +
Sbjct: 5 GFEFDQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVG---DFMEAF 61
Query: 61 NL-MRMVGFRPD--KITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMY 117
L + M D TF +I + + L + G+Q+HA +K G D+ V +LI MY
Sbjct: 62 RLFLNMWEEFSDAGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDMY 121
Query: 118 SRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
S+CG ++D+ F E V W+++IA Y HG EEA++++ +M + + TF
Sbjct: 122 SKCGSIEDARFVFEEMPEKTTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDHFTFS 181
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
++ C+ E + ++ ++ + T +VD + G +++A + M
Sbjct: 182 MIVRICARLASVEHAKQAHAALI-RHGFGSDIVANTALVDFYSKWGRIEDARHVFDKMAS 240
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRIAEEILG--VNPQDAAPYVLLSNIHASAKRWQGVS 295
K N I W L+ H A + E+++ +NP +LS S +G
Sbjct: 241 K-NVISWNALIGGYGNHGRGSEAVELFEQMIQERMNPNHITFLAVLSACSHSGLSERGWE 299
Query: 296 EFREAMRERNVK 307
F+ R+ +K
Sbjct: 300 IFQSMGRDNRIK 311
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 76/164 (46%), Gaps = 4/164 (2%)
Query: 98 VVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEA 157
++ G D + + ++ M+ +CG + D+ + F E ++V W+++I+ G EA
Sbjct: 1 MIDNGFEFDQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEA 60
Query: 158 INLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC-VV 216
LF M ++ +A TF ++ A + L G + +K +C ++
Sbjct: 61 FRLFLNMWEEFSDAGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIF--VSCALI 118
Query: 217 DLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMA 260
D+ +CG +++A + MP K + W T+++ H ++ A
Sbjct: 119 DMYSKCGSIEDARFVFEEMPEK-TTVGWNTIIAGYALHGYSEEA 161
>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 157/441 (35%), Positives = 261/441 (59%), Gaps = 15/441 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D++ +++ ++Y + G + + + +++++W ++I NGL + L+ + ++
Sbjct: 483 DIMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLK 542
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+PD I +S +S+ + L++L +G++IH +++ G L+ + SSL+ MY+ CG ++
Sbjct: 543 QTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVE 602
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+S K F + D++LW+SMI A G HG G +AI LF++M + + +TF++LLYACS
Sbjct: 603 NSRKMFHSVKQRDLILWTSMINANGMHGCGNKAIALFKKMTDQNVIPDHITFLALLYACS 662
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL +G FF++M Y+ +P EHY C+VDLL R L+EA +RNMP+K ++ IW
Sbjct: 663 HSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYHFVRNMPIKPSSEIW 722
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
LL AC H + ++ A+E+L + +++ Y L+SNI A+ RW V E R M+
Sbjct: 723 CALLGACHIHSNKELGELAAKELLQSDTENSGKYALISNIFAADGRWNDVEEVRLRMKGN 782
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLR-GYVPDTGADMHD 363
+KK PG SW+E+ N++H F DKSHP++ +I L L + T ++ + GY+ T H+
Sbjct: 783 GLKKNPGCSWIEVDNKIHTFMARDKSHPQTDDIYLKLAQFTKLLEKKGGYIAQTKFVFHN 842
Query: 364 MDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVMLP------------FKYISEIKNREII 409
+ EEK L HSE+LA+ + +G + + FK SE+ R ++
Sbjct: 843 VSEEEKTQMLYGHSERLALGYGLLVTPKGTCIRITKNLRICDDCHTFFKIASEVSQRPLV 902
Query: 410 VRDASRFHHFRNGKCSCGDYW 430
VRDA+RFHHF G CSCGD+W
Sbjct: 903 VRDANRFHHFERGLCSCGDFW 923
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 137/250 (54%), Gaps = 9/250 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ ++L MY K G + + +V M R+ ++W TL++G QN L D L+ + M+
Sbjct: 282 DVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQ 341
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G +PD+++ +++I++ L +G+++HA ++ G ++ + ++L+ MY++C C+
Sbjct: 342 NSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVK 401
Query: 125 DSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
F EC + D++ W+++IA Y + EAINLF +++ K + + + S+L AC
Sbjct: 402 YMGHAF-ECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRAC 460
Query: 184 SHCGLKEKGM--EFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
S GLK + E + K+ L++ +V++ G G++D A ++ K +
Sbjct: 461 S--GLKSRNFIREIHGYVFKRDLADIMLQN--AIVNVYGEVGHIDYARRAFESIRSK-DI 515
Query: 242 IIWKTLLSAC 251
+ W ++++ C
Sbjct: 516 VSWTSMITCC 525
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 119/249 (47%), Gaps = 4/249 (1%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
L + L MY K GSL + KV M R + +W L+ +G + ++ Y M
Sbjct: 77 LSAFLATKLVLMYGKCGSLRDAVKVFDEMSERTIFSWNALMGAFVSSGKYLEAIELYKDM 136
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
R++G D TF SV+ +C L G +IH VK G V V ++LI+MY +CG L
Sbjct: 137 RVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDL 196
Query: 124 DDSVKTF--LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+ F + E D V W+S+I+A+ G EA++LF +M++ +N TFV+ L
Sbjct: 197 GGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQ 256
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
+ GM ++K + ++ + +CG +++A + +M + +
Sbjct: 257 GVEDPSFVKLGMGIHGAVLKS-NHFADVYVANALIAMYAKCGRMEDAGRVFESMLCR-DY 314
Query: 242 IIWKTLLSA 250
+ W TLLS
Sbjct: 315 VSWNTLLSG 323
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 131/262 (50%), Gaps = 7/262 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + ++ G++L MY K + M +++I+W T+IAG AQN + ++ +
Sbjct: 379 GLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLF 438
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+++ G D + SV+ +CS L + ++IH V K + D+ + ++++++Y
Sbjct: 439 RKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDLA-DIMLQNAIVNVYGEV 497
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +D + + F D+V W+SMI +G EA+ LF ++Q + + + +S L
Sbjct: 498 GHIDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISAL 557
Query: 181 YACSHCGLKEKGMEFFDLMVKK--YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
A ++ +KG E +++K + P + +VD+ CG ++ + + ++ +
Sbjct: 558 SATANLSSLKKGKEIHGFLIRKGFFLEGPIA---SSLVDMYACCGTVENSRKMFHSVKQR 614
Query: 239 ANAIIWKTLLSACKTHKSTDMA 260
+ I+W ++++A H + A
Sbjct: 615 -DLILWTSMINANGMHGCGNKA 635
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 115/244 (47%), Gaps = 6/244 (2%)
Query: 10 SSLAHMYMKSGSLVEGEKVIR---LMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV 66
++L MY K G L G +V+ +M + ++W ++I+ G + L + M+ V
Sbjct: 184 NALIAMYGKCGDL-GGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEV 242
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
G + TFV+ + + + + G IH V+K+ DV V ++LI+MY++CG ++D+
Sbjct: 243 GVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDA 302
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHC 186
+ F D V W+++++ + +A+N F M+ + + V+ ++L+ A
Sbjct: 303 GRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRS 362
Query: 187 GLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKT 246
G KG E ++ ++ +VD+ +C + M K + I W T
Sbjct: 363 GNLLKGKEVHAYAIRN-GLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEK-DLISWTT 420
Query: 247 LLSA 250
+++
Sbjct: 421 IIAG 424
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 84/172 (48%), Gaps = 8/172 (4%)
Query: 82 CSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLW 141
C L QGQQ+HA ++K + L + + L+ MY +CG L D+VK F E + W
Sbjct: 56 CVAAKALPQGQQLHALLLK--SHLSAFLATKLVLMYGKCGSLRDAVKVFDEMSERTIFSW 113
Query: 142 SSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVK 201
++++ A+ GK EAI L++ M + TF S+L AC G G E + VK
Sbjct: 114 NALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVK 173
Query: 202 KYRRKPRLEHYTC--VVDLLGRCGYLDEAAALIRN-MPVKANAIIWKTLLSA 250
+ + C ++ + G+CG L A L M K + + W +++SA
Sbjct: 174 CGYGEFV---FVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISA 222
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF L+ SSL MY G++ K+ + R++I W ++I +G + +
Sbjct: 580 GFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNKAIALF 639
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLD 106
M PD ITF++++ +CS + +G++ E++K G L+
Sbjct: 640 KKMTDQNVIPDHITFLALLYACSHSGLMVEGKRFF-EIMKYGYQLE 684
>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2261; Flags: Precursor
gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 164/452 (36%), Positives = 268/452 (59%), Gaps = 22/452 (4%)
Query: 1 GFELDLVAGSSLAH----MYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDV 56
F+ L + SS+A+ M++KS + + ++ + +N++++ T + G +N E
Sbjct: 399 AFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQA 458
Query: 57 LDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISM 116
+ + TF S++S + + ++ +G+QIH++VVK G S + V ++LISM
Sbjct: 459 FKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISM 518
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
YS+CG +D + + F E +V+ W+SMI + HG + F QM ++ + N+VT+
Sbjct: 519 YSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTY 578
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
V++L ACSH GL +G F+ M + ++ KP++EHY C+VDLL R G L +A I MP
Sbjct: 579 VAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMP 638
Query: 237 VKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSE 296
+A+ ++W+T L AC+ H +T++ A +IL ++P + A Y+ LSNI+A A +W+ +E
Sbjct: 639 FQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTE 698
Query: 297 FREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPD 356
R M+ERN+ KE G SW+E+ +++H+F +GD +HP + +I L+ L +E+K GYVPD
Sbjct: 699 MRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPD 758
Query: 357 TGADMHDMDSEEKEYN----LKHHSEKLAIAFA----EHTRGLIVML----------PFK 398
T +H ++ E E L HSEK+A+AF +R + V K
Sbjct: 759 TDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMK 818
Query: 399 YISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
YIS + REI++RD +RFHHF++GKCSC DYW
Sbjct: 819 YISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 95/190 (50%), Gaps = 8/190 (4%)
Query: 2 FELDLVAGSSLAHMYMKS-GSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
FE D+ G SL M++K S KV M NV+ W +I Q G + + +
Sbjct: 198 FESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFF 257
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M + GF DK T SV S+C+EL L G+Q+H+ +++G DV SL+ MY++C
Sbjct: 258 LDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKC 315
Query: 121 ---GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGK-GEEAINLFEQM-EQKEFEANDVT 175
G +DD K F E V+ W+++I Y + EAINLF +M Q E N T
Sbjct: 316 SADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFT 375
Query: 176 FVSLLYACSH 185
F S AC +
Sbjct: 376 FSSAFKACGN 385
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 93/199 (46%), Gaps = 12/199 (6%)
Query: 61 NLMRMVGFRP-DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+LM G RP D +TF S++ SC G+ +HA +++ D + +SLIS+YS+
Sbjct: 50 DLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSK 109
Query: 120 CG---CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
G +D +T DVV WS+M+A YG +G+ +AI +F + + ND +
Sbjct: 110 SGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCY 169
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV----VDLLGRCGYLDEAAALI 232
+++ ACS+ G ++K E CV +D+ + E A +
Sbjct: 170 TAVIRACSNSDFVGVGRVTLGFLMK----TGHFESDVCVGCSLIDMFVKGENSFENAYKV 225
Query: 233 RNMPVKANAIIWKTLLSAC 251
+ + N + W +++ C
Sbjct: 226 FDKMSELNVVTWTLMITRC 244
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 87/187 (46%), Gaps = 5/187 (2%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKV---IRLMPIRNVIAWITLIAGKAQNGLAEDVLDQ 59
E D V +SL +Y KSG + E V +R R+V++W ++A NG D +
Sbjct: 94 EPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKV 153
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAG-ASLDVGVISSLISMYS 118
+ +G P+ + +VI +CS +G G+ ++K G DV V SLI M+
Sbjct: 154 FVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFV 213
Query: 119 RC-GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
+ +++ K F + +VV W+ MI G EAI F M FE++ T
Sbjct: 214 KGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLS 273
Query: 178 SLLYACS 184
S+ AC+
Sbjct: 274 SVFSACA 280
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 170/453 (37%), Positives = 256/453 (56%), Gaps = 28/453 (6%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF +L ++L MY K G + K+ M ++VI W T+I G L E+ L +
Sbjct: 289 GFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLF 348
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVK----AGASLDVGVISSLISM 116
+M P+ +TF++V+ +C+ L L G+ +HA + K G +V + +S+I M
Sbjct: 349 EVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVM 408
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
Y++CGC++ + + F + W++MI+ +G E A+ LFE+M + F+ +D+TF
Sbjct: 409 YAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITF 468
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
V +L AC+ G E G +F M K Y P+L+HY C++DLL R G DEA L+ NM
Sbjct: 469 VGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNME 528
Query: 237 VKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSE 296
++ + IW +LL+AC+ H + +AE + + P+++ YVLLSNI+A A RW V++
Sbjct: 529 MEPDGAIWGSLLNACRIHGQVEFGEYVAERLFELEPENSGAYVLLSNIYAGAGRWDDVAK 588
Query: 297 FREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPD 356
R + ++ +KK PG + +EI VH+F +GDK HP+S I L+E+ ++ G+VPD
Sbjct: 589 IRTKLNDKGMKKVPGCTSIEIDGVVHEFLVGDKFHPQSENIFRMLDEVDRLLEETGFVPD 648
Query: 357 TGADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------F 397
T ++DMD E KE L HSEKLAIAF GLI P
Sbjct: 649 TSEVLYDMDEEWKEGALTQHSEKLAIAF-----GLISTKPGSTIRIVKNLRVCRNCHSAT 703
Query: 398 KYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
K IS+I NREII RD +RFHHF++G CSC D W
Sbjct: 704 KLISKIFNREIIARDRNRFHHFKDGFCSCNDRW 736
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 146/275 (53%), Gaps = 6/275 (2%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D V+ ++L Y+ G + + ++ +P ++V++W +IAG Q+G E+ L + M+
Sbjct: 192 DAVSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQ 251
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
P++ T VSV+S+C L +L G+ I + V G ++ ++++L+ MYS+CG +
Sbjct: 252 EADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIG 311
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ K F E DV+LW++MI Y EEA+ LFE M ++ NDVTF+++L AC+
Sbjct: 312 TARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACA 371
Query: 185 HCGLKEKGM---EFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
G + G + D +K + +T ++ + +CG ++ A + R+M ++ A
Sbjct: 372 SLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLA 431
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQD 274
W ++S + + A + EE++ G P D
Sbjct: 432 -SWNAMISGLAMNGHAERALGLFEEMINEGFQPDD 465
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 106/244 (43%), Gaps = 33/244 (13%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
N+ W TLI + L ++ M G P+ TF S+ SC++ + +Q+H
Sbjct: 91 NIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLH 150
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCL-------------------------------D 124
A +K L V +SLI MYS+ G L D
Sbjct: 151 AHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVD 210
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D+ + F E DVV W++MIA Y G+ EEA+ F +M++ + N T VS+L AC
Sbjct: 211 DARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACG 270
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H E G ++ V+ L+ +VD+ +CG + A L M K + I+W
Sbjct: 271 HLRSLELG-KWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDK-DVILW 328
Query: 245 KTLL 248
T++
Sbjct: 329 NTMI 332
>gi|312190418|gb|ADQ43217.1| pentatricopeptide repeat [Eutrema parvulum]
Length = 616
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 165/449 (36%), Positives = 260/449 (57%), Gaps = 26/449 (5%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRN-VIAWITLIAGKAQNGLAEDVLDQYN 61
E D V+ +S+ Y+K+G + + R MP +N I+W T+I+G Q G+ ++ L ++
Sbjct: 173 EPDAVSWNSVIKGYVKAGEMDMALTLFRKMPEKNNAISWTTMISGYVQAGMNKEALQLFH 232
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M+ PD ++ S +S+CS+L L QG+ IH+ K +D + LI MY++CG
Sbjct: 233 EMQNSNVPPDNVSLASALSACSQLGALEQGKWIHSYANKTRTRIDSVLCCVLIDMYAKCG 292
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+++++ F + V +W+++I+ Y +HG G EAI+ F +M+ + N +TF ++L
Sbjct: 293 EMEEALGVFKNMKTKSVQVWTALISGYAYHGLGREAISKFLEMQNMGVKPNAITFTAVLT 352
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
ACS+ GL E+G F+ + + Y KP +EHY C+VDLLGR G L+EA I+ MP+K NA
Sbjct: 353 ACSYTGLVEEGKSVFNTIERDYNLKPTIEHYGCMVDLLGRAGLLNEANRFIQKMPLKPNA 412
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
+IW +LL AC+ HK+ ++ +I E ++ ++ YV ++NIHA K+W +E R M
Sbjct: 413 VIWGSLLKACQIHKNIELGEKIGEILIEMDSNHGGRYVHMANIHAMGKKWDKAAETRRLM 472
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
RE+ V K PG S + ++ H+F GD+SH EI + +++ GYVP+ +
Sbjct: 473 REQGVVKVPGCSAISLEGTTHEFLAGDRSHAEIQEIRTKWRFVRRKLEENGYVPELEDML 532
Query: 362 HDM-DSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
D+ D EEKE + HSEKLAI + GL+ P IS
Sbjct: 533 LDLVDDEEKEAIVHQHSEKLAITY-----GLMKTKPGTTIRIMKNLRVCKDCHKVMNLIS 587
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+I R+I++RD +RFHHF++GKCSCGDYW
Sbjct: 588 KIYKRDIVMRDRTRFHHFKDGKCSCGDYW 616
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 132/308 (42%), Gaps = 40/308 (12%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
+ W +I G + + + L Y+ M + TF ++ +CS L+ + QIH
Sbjct: 74 DTFLWNLMIRGLSCSDQPDRSLLLYHRMLCCSAPHNAYTFPFLLKACSNLSAFQETTQIH 133
Query: 96 AEVVKAGASLDVGVISSLISMYS-------------------------------RCGCLD 124
A + K G D+ ++SLI+ Y+ + G +D
Sbjct: 134 AHITKFGYGHDIYAVNSLINSYAVTGNFKHAHLLFDRIQEPDAVSWNSVIKGYVKAGEMD 193
Query: 125 DSVKTFLEC-EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
++ F + E ++ + W++MI+ Y G +EA+ LF +M+ ++V+ S L AC
Sbjct: 194 MALTLFRKMPEKNNAISWTTMISGYVQAGMNKEALQLFHEMQNSNVPPDNVSLASALSAC 253
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC--VVDLLGRCGYLDEAAALIRNMPVKANA 241
S G E+G K + R++ C ++D+ +CG ++EA + +NM K+
Sbjct: 254 SQLGALEQGKWIHSYANKT---RTRIDSVLCCVLIDMYAKCGEMEEALGVFKNMKTKS-V 309
Query: 242 IIWKTLLSACKTH--KSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
+W L+S H ++ + + +GV P +L+ + +G S F
Sbjct: 310 QVWTALISGYAYHGLGREAISKFLEMQNMGVKPNAITFTAVLTACSYTGLVEEGKSVFNT 369
Query: 300 AMRERNVK 307
R+ N+K
Sbjct: 370 IERDYNLK 377
>gi|297816218|ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321830|gb|EFH52251.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 721
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 174/452 (38%), Positives = 270/452 (59%), Gaps = 22/452 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGS---LVEGEKVIRLMPIRNVIAWITLIAGKAQNG-LAEDV 56
GF + GS L Y K G + + EKV + + +++ W T+I+G + N +E+
Sbjct: 270 GFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPDLVLWNTMISGYSMNEEHSEEA 329
Query: 57 LDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAG-ASLDVGVISSLIS 115
+ + M+ +G RPD +FV V S+CS L++ QG+QIH +K+ S + V ++LIS
Sbjct: 330 VKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHGLAIKSNIPSNRISVNNALIS 389
Query: 116 MYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVT 175
+Y + G L D+ + F + V ++ MI Y HG G EA+ L+++M N++T
Sbjct: 390 LYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGTEALRLYQRMLDSGIAPNNIT 449
Query: 176 FVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM 235
FV++L AC+HCG ++G ++F+ M + ++ +P EHY+C++DLLGR G L+EA I M
Sbjct: 450 FVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAM 509
Query: 236 PVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVS 295
P K ++ W LL AC+ HK+ +A R A+E++ + P A PYV+L+N++A A +W+ ++
Sbjct: 510 PYKPGSVAWAALLGACRKHKNMALAERAAKELMVMQPLAATPYVMLANMYADAGKWEEMA 569
Query: 296 EFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVP 355
R++MR + ++K+PG SW+E+K + H F D SHP E++ YLEE+ +MK GYV
Sbjct: 570 SVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVM 629
Query: 356 DTGADM---HDMDSEEKEYNLKHHSEKLAIAFA-EHTRG--LIVML-----------PFK 398
D M + E+E L HHSEKLA+AF TR IV++ K
Sbjct: 630 DKKWAMVKEDEAGEGEEEMRLGHHSEKLAVAFGLMSTRDGEEIVVVKNLRICGDCHNAIK 689
Query: 399 YISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
++S + REIIVRD RFH F++GKCSCGDYW
Sbjct: 690 FMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 147/317 (46%), Gaps = 10/317 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMP-IRNVIAWITLIAGKAQNGLAEDVLDQ 59
GF+ ++ Y K G L E V M +R+ ++W ++I Q+ L
Sbjct: 168 GFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALAL 227
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
Y M GF+ D T SV+++ + L L G+Q H +++KAG + V S LI YS+
Sbjct: 228 YKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSK 287
Query: 120 CGCLD---DSVKTFLECEYSDVVLWSSMIAAYGFHGK-GEEAINLFEQMEQKEFEANDVT 175
CG D DS K F E D+VLW++MI+ Y + + EEA+ F QM++ +D +
Sbjct: 288 CGGRDGMSDSEKVFQEILSPDLVLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCS 347
Query: 176 FVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM 235
FV + ACS+ +G + L +K R+ ++ L + G L +A + M
Sbjct: 348 FVCVTSACSNLSSPSQGKQIHGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRM 407
Query: 236 PVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQG 293
P + NA+ + ++ H A R+ + +L G+ P + +LS K +G
Sbjct: 408 P-ELNAVSFNCMIKGYAQHGHGTEALRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEG 466
Query: 294 VSEFREAMRERNVKKEP 310
F M+E K EP
Sbjct: 467 QKYF-NTMKE-TFKIEP 481
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 118/252 (46%), Gaps = 8/252 (3%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E ++ + + + Y K + ++ P + +++ TLI+G A + +
Sbjct: 71 EPNVFSYNVIVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKR 130
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
MR +GF D T +I++C + L +Q+H V G V ++ ++ YS+ G
Sbjct: 131 MRELGFEVDGFTLSGLIAACCDRVDL--IKQLHCFAVSGGFDSYSSVNNAFVTYYSKGGL 188
Query: 123 LDDSVKTFLECE-YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
L ++V F + D V W+SMI AYG H +G +A+ L+++M K F+ + T S+L
Sbjct: 189 LREAVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLN 248
Query: 182 ACSHCGLKEKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLD--EAAALIRNMPVK 238
A + G +F ++K + + + + ++D +CG D + + +
Sbjct: 249 ALTSLDHLIGGRQFHGKLIKAGFHQNSHVG--SGLIDFYSKCGGRDGMSDSEKVFQEILS 306
Query: 239 ANAIIWKTLLSA 250
+ ++W T++S
Sbjct: 307 PDLVLWNTMISG 318
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 84/221 (38%), Gaps = 52/221 (23%)
Query: 88 LGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD------DSV-------------- 127
L G+ +HA VK+ + + + +++YS+CGCL DS
Sbjct: 24 LFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDSTEEPNVFSYNVIVKA 83
Query: 128 -----------KTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
+ F E D V ++++I+ Y + A+ LF++M + FE + T
Sbjct: 84 YAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMRELGFEVDGFTL 143
Query: 177 VSLLYACS---------HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDE 227
L+ AC HC G + + + + V + G L E
Sbjct: 144 SGLIAACCDRVDLIKQLHCFAVSGGFDSYSSVNNAF------------VTYYSKGGLLRE 191
Query: 228 AAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL 268
A ++ M + + W +++ A HK A + +E++
Sbjct: 192 AVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMI 232
>gi|356529928|ref|XP_003533538.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Glycine max]
Length = 690
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 168/440 (38%), Positives = 258/440 (58%), Gaps = 15/440 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D +L MY K GS+ + V MP + + W ++IA A +G +E+ L Y MR
Sbjct: 252 DTFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSFYYEMR 311
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G + D T VI C+ LA+L +Q HA +V+ G D+ ++L+ YS+ G ++
Sbjct: 312 DSGAKIDHFTISIVIRICARLASLEYAKQAHAALVRRGYDTDIVANTALVDFYSKWGRME 371
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D+ F +V+ W+++IA YG HG+GEEA+ +FEQM ++ N VTF+++L ACS
Sbjct: 372 DAWHVFNRMRRKNVISWNALIAGYGNHGQGEEAVEMFEQMLREGMIPNHVTFLAVLSACS 431
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
+ GL E+G E F M + ++ KPR HY C+V+LLGR G LDEA LIR+ P K +W
Sbjct: 432 YSGLSERGWEIFYSMSRDHKVKPRAMHYACMVELLGREGLLDEAYELIRSAPFKPTTNMW 491
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
TLL+AC+ H++ ++ AE + G+ P+ Y++L N++ S+ + + + + ++ +
Sbjct: 492 ATLLTACRMHENLELGKLAAENLYGMEPEKLCNYIVLLNLYNSSGKLKEAAGVLQTLKRK 551
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
++ P +W+E+K Q + F GDKSH ++ EI + + E+ GYV + A + D+
Sbjct: 552 GLRMLPACTWIEVKKQSYAFLCGDKSHSQTKEIYEKVNNMMVEISRHGYVEENKALLPDV 611
Query: 365 DSEEKEYNLKHHSEKLAIAFA----------EHTRGLIVM----LPFKYISEIKNREIIV 410
D EE+ LK+HSEKLAIAF + T+G V K+I+ + REI+V
Sbjct: 612 DEEEQRI-LKYHSEKLAIAFGLINTPHWTPLQITQGHRVCGDCHSAIKFIAMVTGREIVV 670
Query: 411 RDASRFHHFRNGKCSCGDYW 430
RDASRFHHFR+G CSCGDYW
Sbjct: 671 RDASRFHHFRDGSCSCGDYW 690
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 144/309 (46%), Gaps = 4/309 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE DL + + +++K G +++ K+ MP +++ +W+T+I G +G + +
Sbjct: 147 GFEPDLYVMNRVLFVHVKCGLMLDARKLFDEMPEKDMASWMTMIGGFVDSGNFSEAFGLF 206
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M TF ++I + + L + G+QIH+ +K G D V +LI MYS+C
Sbjct: 207 LCMWEEFNDGRSRTFTTMIRASAGLGLVQVGRQIHSCALKRGVGDDTFVSCALIDMYSKC 266
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++D+ F + V W+S+IA+Y HG EEA++ + +M + + T ++
Sbjct: 267 GSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSFYYEMRDSGAKIDHFTISIVI 326
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
C+ E + +V++ + + T +VD + G +++A + M K N
Sbjct: 327 RICARLASLEYAKQAHAALVRRGYDTDIVAN-TALVDFYSKWGRMEDAWHVFNRMRRK-N 384
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
I W L++ H + A + E++L G+ P +LS S +G F
Sbjct: 385 VISWNALIAGYGNHGQGEEAVEMFEQMLREGMIPNHVTFLAVLSACSYSGLSERGWEIFY 444
Query: 299 EAMRERNVK 307
R+ VK
Sbjct: 445 SMSRDHKVK 453
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 97/195 (49%), Gaps = 4/195 (2%)
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
GF T+ +++S+C L ++ +++ +V +G D+ V++ ++ ++ +CG + D+
Sbjct: 112 GFDVGGSTYDALVSACVGLRSIRGVKRVFNYMVNSGFEPDLYVMNRVLFVHVKCGLMLDA 171
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHC 186
K F E D+ W +MI + G EA LF M ++ + TF +++ A +
Sbjct: 172 RKLFDEMPEKDMASWMTMIGGFVDSGNFSEAFGLFLCMWEEFNDGRSRTFTTMIRASAGL 231
Query: 187 GLKEKGMEFFDLMVKKYRRKPRLEHYTC-VVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
GL + G + +K R +C ++D+ +CG +++A + MP K + W
Sbjct: 232 GLVQVGRQIHSCALK--RGVGDDTFVSCALIDMYSKCGSIEDAHCVFDQMPEK-TTVGWN 288
Query: 246 TLLSACKTHKSTDMA 260
+++++ H ++ A
Sbjct: 289 SIIASYALHGYSEEA 303
>gi|224065723|ref|XP_002301939.1| predicted protein [Populus trichocarpa]
gi|222843665|gb|EEE81212.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 164/449 (36%), Positives = 263/449 (58%), Gaps = 24/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G L++ +SL ++Y K G L + M ++++++W +++A GLAE + +
Sbjct: 170 GMLLEVKVVNSLINLYGKCGCLEAACCLFEGMSVQSLVSWNSMVAVHVHMGLAEKGIGYF 229
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+MR G D+ T VS++ +C L + +H ++ G ++ + ++L+ +Y++
Sbjct: 230 IMMRRAGINSDQATVVSLLLACENLGVRKLAEAVHGYILNGGLDGNLAIATALLDLYAKL 289
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L DS K F D V W++M+++Y HG+G EAI FE M ++ + VTF LL
Sbjct: 290 GTLSDSCKVFGGMINPDAVAWTAMLSSYAMHGRGREAIEHFELMVREGVVPDHVTFTHLL 349
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL E+G +F +M + Y + R+EHY+C+VDLLGR G+L++A LI++MP++ N
Sbjct: 350 SACSHSGLVEEGKNYFKIMYEFYGVELRVEHYSCMVDLLGRSGHLNDAYKLIKSMPMEPN 409
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+ +W L+ AC+ + ++ +AE + ++P D+ Y+ LSN++++A +W+ S+ R
Sbjct: 410 SGVWGALIGACRVRGNIELGKEVAERLFSLDPSDSRNYITLSNMYSAAGQWRDASKVRAL 469
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+ER + + PG S++E N++H F MGD+SHP + +I LEEL + + G+ T
Sbjct: 470 MKERVLIRNPGCSYIEHGNKIHCFVMGDQSHPDTEQIYNKLEELVRKNREVGFASKTEYV 529
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVM---LPF----------------KYIS 401
+HD+D E KE + HSEKLAIAF GL+V +P K IS
Sbjct: 530 LHDVDEEVKEDLINKHSEKLAIAF-----GLLVTNAGMPLIITKNIRICGDCHGFAKLIS 584
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
I+ R II+RD RFHHF NG CSCGDYW
Sbjct: 585 LIEKRTIIIRDTKRFHHFTNGLCSCGDYW 613
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 127/247 (51%), Gaps = 3/247 (1%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRM-VG 67
G L Y++ G + ++ +P +++++W +LI+G ++ L MR +G
Sbjct: 76 GDQLVSSYVELGCTKDALELFDELPDKDLVSWNSLISGFSRRADLGICLGLLFRMRFEMG 135
Query: 68 FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV 127
+P+++T + V+S+C+ + L G+ IH VK+G L+V V++SLI++Y +CGCL+ +
Sbjct: 136 LKPNEVTVIPVVSACAGVGELDVGKCIHGIAVKSGMLLEVKVVNSLINLYGKCGCLEAAC 195
Query: 128 KTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCG 187
F +V W+SM+A + G E+ I F M + ++ T VSLL AC + G
Sbjct: 196 CLFEGMSVQSLVSWNSMVAVHVHMGLAEKGIGYFIMMRRAGINSDQATVVSLLLACENLG 255
Query: 188 LKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTL 247
++ K E + L T ++DL + G L ++ + M + +A+ W +
Sbjct: 256 VR-KLAEAVHGYILNGGLDGNLAIATALLDLYAKLGTLSDSCKVFGGM-INPDAVAWTAM 313
Query: 248 LSACKTH 254
LS+ H
Sbjct: 314 LSSYAMH 320
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 166/447 (37%), Positives = 255/447 (57%), Gaps = 27/447 (6%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
L L ++L MY K GS+ E V +P++++++W T+I G ++N L + L + M
Sbjct: 788 LCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEM 847
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
+ RPD IT ++ +C LA L G+ IH +++ G S ++ V ++LI MY +CG L
Sbjct: 848 QKES-RPDGITMACLLPACGSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSL 906
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
+ F D++ W+ MI+ G HG G EAI F++M + +++TF S+LYAC
Sbjct: 907 VHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYAC 966
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
SH GL +G FF+ M+ + +P+LEHY C+VDLL R G L +A LI MP+K +A I
Sbjct: 967 SHSGLLNEGWGFFNSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIKPDATI 1026
Query: 244 WKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
W LL C+ H ++A ++AE + + P +A YVLL+NI+A A++W+ V + RE + +
Sbjct: 1027 WGALLCGCRIHHDVELAEKVAEHVFELEPDNAGYYVLLANIYAEAEKWEEVKKLRERIGK 1086
Query: 304 RNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHD 363
R +KK PG SW+E++ + F D +HP++ I L L +MK G+ P + +
Sbjct: 1087 RGLKKSPGCSWIEVQGKFTTFVSADTAHPQAKSIFSLLNNLRIKMKNEGHSPKMRYALIN 1146
Query: 364 MDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP--------------------FKYISEI 403
EKE L HSEKLA+AF I+ LP K++S+
Sbjct: 1147 AGDMEKEVALCGHSEKLAMAFG------ILNLPSGRTIRVAKNLRVCDDCHEMAKFMSKT 1200
Query: 404 KNREIIVRDASRFHHFRNGKCSCGDYW 430
REII+RD++RFHHF++G CSC D+W
Sbjct: 1201 TRREIILRDSNRFHHFKDGFCSCRDFW 1227
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 133/241 (55%), Gaps = 2/241 (0%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+SL Y KSG + K+ + R+V++W ++I+G NG + L+ + M ++
Sbjct: 592 NSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVG 651
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
D T V+ +++C+ + +L G+ +H + VKA S +V ++L+ MYS+CG L+D+++
Sbjct: 652 VDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQA 711
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F + VV W+S+IAAY G ++AI LF +ME K + + S+L+AC+
Sbjct: 712 FEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSL 771
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
+KG + + ++K L ++D+ +CG ++EA + +PVK + + W T++
Sbjct: 772 DKGRDVHNY-IRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVK-DIVSWNTMIG 829
Query: 250 A 250
Sbjct: 830 G 830
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 147/311 (47%), Gaps = 7/311 (2%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F +++ ++L MY K G+L + + M + V++W +LIA + GL +D + +
Sbjct: 685 FSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFY 744
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M G PD + SV+ +C+ +L +G+ +H + K +L + V ++L+ MY++CG
Sbjct: 745 EMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCG 804
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
++++ F + D+V W++MI Y + EA+ LF +M QKE + +T LL
Sbjct: 805 SMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEM-QKESRPDGITMACLLP 863
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
AC E G +++ L ++D+ +CG L A L +P K +
Sbjct: 864 ACGSLAALEIGRGIHGCILRN-GYSSELHVANALIDMYVKCGSLVHARLLFDMIPEK-DL 921
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEE--ILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
I W ++S C H + A ++ I G+ P + +L S +G F
Sbjct: 922 ITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNS 981
Query: 300 AMRERNVKKEP 310
+ E N+ EP
Sbjct: 982 MISECNM--EP 990
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 137/291 (47%), Gaps = 8/291 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVI-RLMPIRNVIAWITLIAGKAQNGLAEDVLDQ 59
G ++ V G+ L MY+ G+L EG ++ ++ V W +++ A+ G + +
Sbjct: 481 GIPIEGVLGAKLVFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYL 540
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ M+ +G + TF ++ + L +G+ ++IH V K G V++SLI+ Y +
Sbjct: 541 FKKMQKLGITGNSYTFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFK 600
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G +D + K F E DVV W+SMI+ +G A+ F QM + T V+
Sbjct: 601 SGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNS 660
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
+ AC++ G G VK + + + T ++D+ +CG L++A M K
Sbjct: 661 VAACANVGSLSLGRALHGQGVKACFSREVMFNNT-LLDMYSKCGNLNDAIQAFEKMGQKT 719
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLSNIHASA 288
+ W +L++A D A R+ E+ GV+P Y + S +HA A
Sbjct: 720 -VVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPD---VYSMTSVLHACA 766
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 54/91 (59%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ +L ++L MY+K GSLV + ++P +++I W +I+G +GL + + +
Sbjct: 885 GYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATF 944
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQG 91
MR+ G +PD+ITF S++ +CS L +G
Sbjct: 945 QKMRIAGIKPDEITFTSILYACSHSGLLNEG 975
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 63/128 (49%), Gaps = 2/128 (1%)
Query: 55 DVLDQYNLMRMVGFRP-DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSL 113
D+ + L+RM D + S++ C+E L +G+ +H+ + G ++ + + L
Sbjct: 433 DLRNAVELLRMSQKSELDLNAYSSILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKL 492
Query: 114 ISMYSRCGCLDDSVKTFLEC-EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEAN 172
+ MY CG L + + F + V LW+ M++ Y G E+I LF++M++ N
Sbjct: 493 VFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGN 552
Query: 173 DVTFVSLL 180
TF +L
Sbjct: 553 SYTFSCIL 560
>gi|115458888|ref|NP_001053044.1| Os04g0469400 [Oryza sativa Japonica Group]
gi|113564615|dbj|BAF14958.1| Os04g0469400, partial [Oryza sativa Japonica Group]
Length = 401
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 160/398 (40%), Positives = 246/398 (61%), Gaps = 15/398 (3%)
Query: 48 AQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDV 107
A+NGL + + + M G +PD + V ++ + + L++L +G++IH +++ ++
Sbjct: 4 AENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEG 63
Query: 108 GVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQK 167
V+SSL+ MYS CG ++ ++K F E + DVVLW++MI A G HG G++AI +F++M +
Sbjct: 64 AVVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLET 123
Query: 168 EFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDE 227
+ V+F++LLYACSH L ++G + D+MV KY+ +P EHY CVVDLLGR G +E
Sbjct: 124 GVSPDHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTEE 183
Query: 228 AAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHAS 287
A I++MP++ +++W LL AC+ HK+ ++A +++L + P + YVL+SN+ A
Sbjct: 184 AYKFIKSMPLEPKSVVWCALLGACRIHKNHELAMIATDKLLELEPDNPGNYVLVSNVFAE 243
Query: 288 AKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSE 347
+W V E R M E+ ++K+P SW+EI N VH FT D SH S I L L E+T +
Sbjct: 244 MGKWNNVKEIRTKMTEQGLRKDPACSWIEIGNTVHTFTARDHSHRDSQAIHLKLAEITEK 303
Query: 348 MKLRG-YVPDTGADMHDMDSEEKEYNLKHHSEKLAIAF-------------AEHTRGLIV 393
++ G YV DT +HD+ EEK L HSE+LAI+F A++ R
Sbjct: 304 LRREGQYVEDTSFVLHDVSEEEKIDLLHRHSERLAISFGLISTASGTPLRIAKNLRVCGD 363
Query: 394 MLPF-KYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
F K +S++ REI+VRDA+RFHHF G CSCGD+W
Sbjct: 364 CHEFTKLVSKLFEREIVVRDANRFHHFSGGTCSCGDFW 401
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 43/91 (47%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F ++ SSL MY GS+ KV ++V+ W +I +G + + +
Sbjct: 59 FPVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFK 118
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQ 92
M G PD ++F++++ +CS + +G+
Sbjct: 119 RMLETGVSPDHVSFLALLYACSHSKLVDEGK 149
>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
Length = 1062
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 177/448 (39%), Positives = 269/448 (60%), Gaps = 19/448 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVI-RLMPIRNVIAWITLIAGKAQNGLAEDVLDQ 59
G D ++L Y KSG + E++ R+ R+ I+W ++I+G NG ++ +D
Sbjct: 616 GVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDC 675
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
LM D TF V+++C+ +A L +G ++HA +++ DV V S+L+ MYS+
Sbjct: 676 VCLMMHSEQMMDHCTFSIVLNACASVAALERGMEMHAFGLRSHLESDVVVESALVDMYSK 735
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG +D + K F + W+SMI+ Y HG G +A+ +FE+M++ + VTFVS+
Sbjct: 736 CGRIDYASKVFHSMSQKNEFSWNSMISGYARHGLGRKALEIFEEMQESGESPDHVTFVSV 795
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L ACSH GL E+G+++F+LM + Y PR+EHY+CV+DLLGR G LD+ ++ MP+K
Sbjct: 796 LSACSHAGLVERGLDYFELM-EDYGILPRIEHYSCVIDLLGRAGELDKIQEYMKRMPMKP 854
Query: 240 NAIIWKTLLSACKTHK---STDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSE 296
N +IW+T+L AC+ K D+ + +L + PQ+ YVL S HA+ RW+ ++
Sbjct: 855 NTLIWRTVLVACQQSKHRAKIDLGTEASRMLLELEPQNPVNYVLSSKFHAAIGRWEDTAK 914
Query: 297 FREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPD 356
R AM+ VKKE G SW+ + + VH F GD+SHP + EI L L +++ GYVP
Sbjct: 915 ARAAMKGAAVKKEAGRSWVTLTDGVHTFIAGDRSHPNTKEIYEKLNFLIQKIRNAGYVPL 974
Query: 357 TGADMHDMDSEEKEYNLKHHSEKLAIAFA---EHTRGLIVML-----------PFKYISE 402
T +HD++ E KE L++HSEKLA+AF + G I ++ F+YIS+
Sbjct: 975 TEYVLHDLEEENKEELLRYHSEKLAVAFVLTRSSSGGPIRIMKNLRVCGDCHTAFRYISQ 1034
Query: 403 IKNREIIVRDASRFHHFRNGKCSCGDYW 430
I R+II+RD+ RFHHF++GKCSCGDYW
Sbjct: 1035 IVGRQIILRDSIRFHHFKDGKCSCGDYW 1062
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 117/246 (47%), Gaps = 2/246 (0%)
Query: 6 LVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRM 65
+ + L +MY K G++ + +V +LM R+ I+W T+I QNG E + Y LMR
Sbjct: 418 IAVSNGLVNMYAKCGAIDKACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQ 477
Query: 66 VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD 125
P +S +SSC+ L L GQQ+H + VK G LD V ++L+ MY CG + +
Sbjct: 478 NSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSE 537
Query: 126 SVKTFLECEYSDVVLWSSMIAAYG-FHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ F DVV W+S++ E++ +F M + N VTFV+ L A +
Sbjct: 538 CWEIFNSMSAHDVVSWNSIMGVMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALT 597
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
+ E G + +M+K + ++ + G +D L M + +AI W
Sbjct: 598 PLSVLELGKQIHSVMLKHGVTEDNAVD-NALMSCYAKSGDVDSCERLFSRMSGRRDAISW 656
Query: 245 KTLLSA 250
+++S
Sbjct: 657 NSMISG 662
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 138/270 (51%), Gaps = 6/270 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITL--IAGKAQNGLAEDVLD 58
G LD ++L MY + G + E ++ M +V++W ++ + +Q + E V
Sbjct: 514 GLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIMGVMASSQAPITESVQV 573
Query: 59 QYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
N+M+ G P+K+TFV+ +++ + L+ L G+QIH+ ++K G + D V ++L+S Y+
Sbjct: 574 FSNMMK-SGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNAVDNALMSCYA 632
Query: 119 RCGCLDDSVKTFLECE-YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
+ G +D + F D + W+SMI+ Y ++G +EA++ M E + TF
Sbjct: 633 KSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHCTFS 692
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
+L AC+ E+GME ++ + + + +VD+ +CG +D A+ + +M
Sbjct: 693 IVLNACASVAALERGMEMHAFGLRSHLESDVVVE-SALVDMYSKCGRIDYASKVFHSMSQ 751
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRIAEEI 267
K N W +++S H A I EE+
Sbjct: 752 K-NEFSWNSMISGYARHGLGRKALEIFEEM 780
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 131/314 (41%), Gaps = 20/314 (6%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G DL + L + Y K L +V MP RN ++W LI+G +GL ED +
Sbjct: 95 GLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLSGLPEDAFPLF 154
Query: 61 NLM--RMVGFRPDKITFVSVISSCSELAT--LGQGQQIHAEVVKAGASLDVGVISSLISM 116
M G RP TF SV+ +C + LG Q+H V K + + V ++LISM
Sbjct: 155 RAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNTTVCNALISM 214
Query: 117 YSRC--GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQK----EFE 170
Y C G + + F D++ W+++++ Y G LF M+ E
Sbjct: 215 YGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAMQYDDSGIELR 274
Query: 171 ANDVTFVSLLYAC--SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEA 228
+ TF SL+ A S C L F + V K L + +V R G LDEA
Sbjct: 275 PTEHTFGSLITATYLSSCSLGLLDQLF--VRVLKSGCSSDLYVGSALVSAFARHGMLDEA 332
Query: 229 AALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRI---AEEILGVNPQDAAPYVLLSNIH 285
+ + + NA+ L++ + + A I A + VN VLLS I
Sbjct: 333 KDIYLGLKER-NAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAVNVDTYV--VLLSAIA 389
Query: 286 ASAKRWQGVSEFRE 299
+ QG+ + RE
Sbjct: 390 EFSTAEQGLRKGRE 403
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 130/268 (48%), Gaps = 29/268 (10%)
Query: 2 FELDLVAGSSLAHMY--MKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQ 59
F + ++L MY G + ++V P+R++I W L++ A+ G D +
Sbjct: 201 FTSNTTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRG---DAICT 257
Query: 60 YNLMRMVGF-------RPDKITFVSVI-----SSCSELATLGQGQQIHAEVVKAGASLDV 107
+ L R + + RP + TF S+I SSCS LG Q+ V+K+G S D+
Sbjct: 258 FTLFRAMQYDDSGIELRPTEHTFGSLITATYLSSCS----LGLLDQLFVRVLKSGCSSDL 313
Query: 108 GVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQK 167
V S+L+S ++R G LD++ +L + + V + +IA GE A +F M +
Sbjct: 314 YVGSALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIF--MGAR 371
Query: 168 EFEANDV-TFVSLLYACSHCGLKEKGM----EFFDLMVKKYRRKPRLEHYTCVVDLLGRC 222
+ A +V T+V LL A + E+G+ E +++ ++ +V++ +C
Sbjct: 372 DSAAVNVDTYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKC 431
Query: 223 GYLDEAAALIRNMPVKANAIIWKTLLSA 250
G +D+A + + M + + I W T+++A
Sbjct: 432 GAIDKACRVFQLMEAR-DRISWNTIITA 458
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 71/166 (42%), Gaps = 12/166 (7%)
Query: 92 QQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFH 151
+ +H EVVK G + D+ + + L++ Y++ LD + + F + V W+ +I+ +
Sbjct: 85 ESLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLS 144
Query: 152 GKGEEAINLFEQM--EQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRL 209
G E+A LF M E TF S+L AC G G F + V K
Sbjct: 145 GLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLG---FAVQVHGLVSKTEF 201
Query: 210 EHYTCVVDLL----GRC--GYLDEAAALIRNMPVKANAIIWKTLLS 249
T V + L G C G A + PV+ + I W L+S
Sbjct: 202 TSNTTVCNALISMYGSCSVGPPILAQRVFDTTPVR-DLITWNALMS 246
>gi|115434844|ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|11034538|dbj|BAB17062.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113531711|dbj|BAF04094.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|125569234|gb|EAZ10749.1| hypothetical protein OsJ_00586 [Oryza sativa Japonica Group]
Length = 665
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 162/435 (37%), Positives = 258/435 (59%), Gaps = 14/435 (3%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+S+ ++SG + + MP R+ IAW +I G Q G D L+ + M++ R
Sbjct: 231 TSVISGLVRSGQVDRARDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVR 290
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
D+ T VSV+++C++L L G+ + + G +DV V ++LI MYS+CG ++ ++
Sbjct: 291 ADEFTMVSVVTACAQLGALETGEWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALDV 350
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F + D W+++I +G+GEEAI++F +M + ++VTFV +L AC+H GL
Sbjct: 351 FKDMHNRDKFTWTAIILGLAVNGRGEEAIDMFYRMLRALQTPDEVTFVGVLTACTHAGLV 410
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
+KG EFF M + Y P + HY C++D+LGR G L EA I MP+K N+ IW TLL+
Sbjct: 411 DKGREFFLSMTEAYNISPTVVHYGCLIDVLGRAGKLKEALDTIDKMPMKPNSTIWGTLLA 470
Query: 250 ACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKE 309
+C+ + ++++ AE +L ++P ++ Y+LLSN++A + RW+ V R+ + E+ +KKE
Sbjct: 471 SCRVYGNSEIGELAAERLLELDPDNSTAYILLSNMYAKSNRWKDVRRIRQIIMEKGIKKE 530
Query: 310 PGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEK 369
PG S +E+ +H+F D+SHP + EI LE + ++++ GYVPD + ++ EEK
Sbjct: 531 PGCSMIEMNGIIHEFVAADRSHPMNKEIYSKLENVLTDLRNAGYVPDVTEVLVEVTEEEK 590
Query: 370 EYNLKHHSEKLAIAFAEHTRGLIVML--------------PFKYISEIKNREIIVRDASR 415
+ L HSEKLA+ FA T V++ K IS++ RE+IVRD +R
Sbjct: 591 QKVLYWHSEKLAVTFALLTSESNVIIRIVKNLRMCLDCHNAIKLISKLYGREVIVRDRTR 650
Query: 416 FHHFRNGKCSCGDYW 430
FHHFR+G CSC DYW
Sbjct: 651 FHHFRHGSCSCKDYW 665
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 103/229 (44%), Gaps = 32/229 (13%)
Query: 38 IAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAE 97
+ W LI+G ++G E + M +T+VSV+S+C + L G Q+H
Sbjct: 127 VMWNALISGHNRSGRFELSCCSFVDMVRASAMATAVTYVSVLSACGKGKDLLLGMQVHKR 186
Query: 98 VVKAGASLDVGVISSLISMYSRCGCLDDS----------------------VKT------ 129
V+++G D V ++L+ MY+ CG +D + V++
Sbjct: 187 VLESGVLPDQRVENALVDMYAECGDMDAAWVLFEGMQMRSMASWTSVISGLVRSGQVDRA 246
Query: 130 ---FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHC 186
F D + W++MI Y G+ +A+ F M+ + A++ T VS++ AC+
Sbjct: 247 RDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTACAQL 306
Query: 187 GLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM 235
G E G E+ + + + K + ++D+ +CG ++ A + ++M
Sbjct: 307 GALETG-EWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALDVFKDM 354
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 78/157 (49%), Gaps = 2/157 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G ++D+ G++L MY K GS+ V + M R+ W +I G A NG E+ +D +
Sbjct: 323 GIKMDVFVGNALIDMYSKCGSIERALDVFKDMHNRDKFTWTAIILGLAVNGRGEEAIDMF 382
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSR 119
M PD++TFV V+++C+ + +G++ + +A S V LI + R
Sbjct: 383 YRMLRALQTPDEVTFVGVLTACTHAGLVDKGREFFLSMTEAYNISPTVVHYGCLIDVLGR 442
Query: 120 CGCLDDSVKTFLECEYS-DVVLWSSMIAAYGFHGKGE 155
G L +++ T + + +W +++A+ +G E
Sbjct: 443 AGKLKEALDTIDKMPMKPNSTIWGTLLASCRVYGNSE 479
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 93/218 (42%), Gaps = 13/218 (5%)
Query: 53 AEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQ-----IHAEVVKAGASLDV 107
AE+ + Y M G RPD TF S++ + + IHA VVK G +
Sbjct: 32 AEEAVAGYVRMLAGGARPDAYTFPSLLKAAAAARGAAVAAASVGGAIHAHVVKFGMESNA 91
Query: 108 GVISSLISMYSRCGCLDDSVKTF----LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQ 163
SSLI MY+ G + L V+W+++I+ + G+ E + F
Sbjct: 92 HAASSLIVMYAARGDGAAARAVLEAACLATGGGAPVMWNALISGHNRSGRFELSCCSFVD 151
Query: 164 MEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRC 222
M + A VT+VS+L AC GM+ +++ R+E+ +VD+ C
Sbjct: 152 MVRASAMATAVTYVSVLSACGKGKDLLLGMQVHKRVLESGVLPDQRVEN--ALVDMYAEC 209
Query: 223 GYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMA 260
G +D A L M +++ A W +++S D A
Sbjct: 210 GDMDAAWVLFEGMQMRSMA-SWTSVISGLVRSGQVDRA 246
>gi|356555295|ref|XP_003545969.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Glycine max]
Length = 626
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 160/449 (35%), Positives = 269/449 (59%), Gaps = 24/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G EL++ ++ +MY K G + K+ +P +N+++W +++A QNG+ + ++ +
Sbjct: 183 GMELEVKVVNAFINMYGKFGCVDSAFKLFWALPEQNMVSWNSMLAVWTQNGIPNEAVNYF 242
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
N+MR+ G PD+ T +S++ +C +L + IH + G + ++ + ++L+++YS+
Sbjct: 243 NMMRVNGLFPDEATILSLLQACEKLPLGRLVEAIHGVIFTCGLNENITIATTLLNLYSKL 302
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L+ S K F E D V ++M+A Y HG G+EAI F+ ++ + + VTF LL
Sbjct: 303 GRLNVSHKVFAEISKPDKVALTAMLAGYAMHGHGKEAIEFFKWTVREGMKPDHVTFTHLL 362
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL G +F +M YR +P+L+HY+C+VDLLGRCG L++A LI++MP++ N
Sbjct: 363 SACSHSGLVMDGKYYFQIMSDFYRVQPQLDHYSCMVDLLGRCGMLNDAYRLIKSMPLEPN 422
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+ +W LL AC+ +++ ++ AE ++ +NP D Y++LSNI+++A W S+ R
Sbjct: 423 SGVWGALLGACRVYRNINLGKEAAENLIALNPSDPRNYIMLSNIYSAAGLWSDASKVRAL 482
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+ + + G S++E N++H+F + D SHP S +I LEE+ ++K G+V +T +
Sbjct: 483 MKTKVFIRNAGCSFIEHGNKIHRFVVDDYSHPDSDKIHRKLEEIMRKIKEVGFVSETESI 542
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVM---LPF----------------KYIS 401
+HD+D E K + HSEK+A+AF GL+V +P K++S
Sbjct: 543 LHDVDEEVKTDMINKHSEKIALAF-----GLLVSNADMPLVIIKNLRICLDCHNTAKFVS 597
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
I+ R II+RD+ RFHHF +G CSC DYW
Sbjct: 598 LIEKRTIIIRDSKRFHHFSDGLCSCADYW 626
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 98/180 (54%), Gaps = 1/180 (0%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D G L Y+ GS + +K+ MP ++ I+W +L++G ++ G + L + MR
Sbjct: 85 DGFIGDQLVSCYLNMGSTPDAQKLFDEMPHKDSISWNSLVSGFSRIGDLGNCLRVFYTMR 144
Query: 65 M-VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
+ F +++T +SVIS+C+ +G +H VK G L+V V+++ I+MY + GC+
Sbjct: 145 YEMAFEWNELTLLSVISACAFAKARDEGWCLHCCAVKLGMELEVKVVNAFINMYGKFGCV 204
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
D + K F ++V W+SM+A + +G EA+N F M ++ T +SLL AC
Sbjct: 205 DSAFKLFWALPEQNMVSWNSMLAVWTQNGIPNEAVNYFNMMRVNGLFPDEATILSLLQAC 264
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 77/158 (48%), Gaps = 3/158 (1%)
Query: 94 IHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGK 153
IHA V+K+ D + L+S Y G D+ K F E + D + W+S+++ + G
Sbjct: 73 IHARVIKSLDYRDGFIGDQLVSCYLNMGSTPDAQKLFDEMPHKDSISWNSLVSGFSRIGD 132
Query: 154 GEEAINLFEQME-QKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY 212
+ +F M + FE N++T +S++ AC+ +++G V K + ++
Sbjct: 133 LGNCLRVFYTMRYEMAFEWNELTLLSVISACAFAKARDEGWCLHCCAV-KLGMELEVKVV 191
Query: 213 TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+++ G+ G +D A L +P + N + W ++L+
Sbjct: 192 NAFINMYGKFGCVDSAFKLFWALP-EQNMVSWNSMLAV 228
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 162/419 (38%), Positives = 247/419 (58%), Gaps = 28/419 (6%)
Query: 32 MPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQG 91
M R+ I+W +I G Q G + L+ ++ M+ RP K SV+S+C+ L L QG
Sbjct: 262 MKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQG 321
Query: 92 QQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFH 151
+ IH + LD + +SL+ MY++CG +D + + F + +V W++MI H
Sbjct: 322 RWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMH 381
Query: 152 GKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEH 211
G+ E+AI+LF +M+ N++TFV +L AC+H GL +KG+ F+ M K+Y +P++EH
Sbjct: 382 GRAEDAIDLFSKMD---INPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEH 438
Query: 212 YTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVN 271
Y C+VDLLGR G L EA ++ ++P + +W LL AC+ H + ++ R+ + +L +
Sbjct: 439 YGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELE 498
Query: 272 PQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEI-KNQVHQFTMGDKS 330
PQ++ Y LLSNI+A A RW+ V E R+ M+ER +K PG S +++ + +VH+F +GD S
Sbjct: 499 PQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGS 558
Query: 331 HPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRG 390
HP+ +I L+++ +++ GY PD + D+D EEKE + HSEKLAI F G
Sbjct: 559 HPQVKDIYQMLDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVWQHSEKLAIGF-----G 613
Query: 391 LIVMLP-------------------FKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
LI P K IS++ NREIIVRD R+HHFRNG CSC D+W
Sbjct: 614 LINTSPGTTIRIVKNLRVCEDCHSATKLISQVYNREIIVRDRIRYHHFRNGACSCKDFW 672
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 109/228 (47%), Gaps = 14/228 (6%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
NV W +I +N + Y M + FRP+K T+ +V+ +CS+ + +G Q+H
Sbjct: 101 NVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVH 160
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLE-CEYSDVVLWSSMIAAYGFHGKG 154
A +VK G D ++SS I MY+ G L ++ + + D V W++MI Y G+
Sbjct: 161 AHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEV 220
Query: 155 EEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLE-HYT 213
E A LFE M + + T+ +++ S CG+ E EFFD M K R E ++
Sbjct: 221 EAARELFEGMPDRSMIS---TWNAMISGFSRCGMVEVAREFFDEM------KERDEISWS 271
Query: 214 CVVDLLGRCGYLDEAAALIRNM---PVKANAIIWKTLLSACKTHKSTD 258
++D + G EA + M ++ + ++LSAC + D
Sbjct: 272 AMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALD 319
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 90/187 (48%), Gaps = 12/187 (6%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
+LD V G+SL MY K G + +V M + V +W +I G A +G AED +D ++
Sbjct: 333 IQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFS 392
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSRC 120
M + P++ITFV V+++C+ + +G I + K G + ++ + R
Sbjct: 393 KMDI---NPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRA 449
Query: 121 GCLDDSVKTF--LECEYSDVVLWSSMIAAYGFHGK---GEEAINLFEQMEQKEFEANDVT 175
G L ++ K + E + V W +++ A HG GE + ++E + + T
Sbjct: 450 GLLTEAEKVVSSIPTEPTPAV-WGALLGACRKHGNVELGERVGKILLELEPQ--NSGRYT 506
Query: 176 FVSLLYA 182
+S +YA
Sbjct: 507 LLSNIYA 513
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 95/203 (46%), Gaps = 11/203 (5%)
Query: 111 SSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFE 170
+++IS +SRCG ++ + + F E + D + WS+MI Y G EA+ +F QM++++
Sbjct: 240 NAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIR 299
Query: 171 ANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLE----HYTCVVDLLGRCGYLD 226
S+L AC++ G ++G + Y ++ ++ T +VD+ +CG +D
Sbjct: 300 PRKFVLPSVLSACANLGALDQGR-----WIHTYAKRNSIQLDGVLGTSLVDMYAKCGRID 354
Query: 227 EAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHA 286
A + M K + W ++ H + A + + + +NP + +L+
Sbjct: 355 LAWEVFEKMSNKEVS-SWNAMIGGLAMHGRAEDAIDLFSK-MDINPNEITFVGVLNACAH 412
Query: 287 SAKRWQGVSEFREAMRERNVKKE 309
+G++ F +E V+ +
Sbjct: 413 GGLVQKGLTIFNSMRKEYGVEPQ 435
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 74/164 (45%), Gaps = 6/164 (3%)
Query: 92 QQIHAEVVKAGASLDVGVISSLISMYS-----RCGCLDDSVKTFLECEYSDVVLWSSMIA 146
+Q HA +++ G D + SL+ Y+ R + S++ F +V LW+ MI
Sbjct: 51 KQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIK 110
Query: 147 AYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRK 206
+ + +AI L+ +M F N T+ ++L ACS G+ +G++ +V K+
Sbjct: 111 VCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLV-KHGLG 169
Query: 207 PRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+ + + G L EA ++ + + +A+ W ++
Sbjct: 170 GDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDG 213
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 168/444 (37%), Positives = 256/444 (57%), Gaps = 25/444 (5%)
Query: 6 LVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRM 65
+V+ +SL ++++G + +V +P RN + W T+I+G Q L ED ++ + M+
Sbjct: 399 VVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQG 458
Query: 66 VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD 125
G + D++T + + S+C L + +H + K G D+ + ++L+ M++RCG
Sbjct: 459 EGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQS 518
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
+++ F + DV W++ I G GE A LF QM + + + V FV +L ACSH
Sbjct: 519 AMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSH 578
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
G E+G+ F LM + + P++EHY C+VDLLGR G L EA LI++MP++ N ++W
Sbjct: 579 GGQVEQGLHIFSLM-EDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWG 637
Query: 246 TLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERN 305
+LL+AC+ HK+ +MA AE I + PQ A +VLLSNI+ASA +W V+ R +RE+
Sbjct: 638 SLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGKWTDVARVRLNLREKG 697
Query: 306 VKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMD 365
V+K PG S +++ +H+FT GD+SHP I L L+E+ G++PD + D+D
Sbjct: 698 VRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQEMNCRFSDAGHIPDLSNVLLDVD 757
Query: 366 SEEKEYNLKHHSEKLAIAFAEHTRGLIVM---LPFKYISEIK----------------NR 406
+EKEY L HSEKLAIAF GLI +P + + ++ NR
Sbjct: 758 EQEKEYLLSRHSEKLAIAF-----GLIATGRSMPIRVVKNLRMCSDCHSFAKMASIIYNR 812
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EIIVRD +RFH FR G CSC DYW
Sbjct: 813 EIIVRDNNRFHFFRQGLCSCCDYW 836
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 138/279 (49%), Gaps = 29/279 (10%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E D+ + L H Y + G + G KV M RNV++W +LI G A+ ++ + +
Sbjct: 161 GLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSLF 220
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G RP +T V VIS+C++L L G+++ A + + G L+ ++++L+ MY +C
Sbjct: 221 FEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVDMYMKC 280
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +D + + F EC ++VL++++++ Y G EA+ + ++M Q+ + VT +S +
Sbjct: 281 GAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAI 340
Query: 181 YACS-----------HCGLKEKGMEFFD----LMVKKYRRKPRLEHYTCVVDLLGR---C 222
A + H + G+E +D +++ Y + + E V DL+
Sbjct: 341 SASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTVV 400
Query: 223 GYLDEAAALIRNMPVKA-----------NAIIWKTLLSA 250
+ A IRN V++ NA+ W T++S
Sbjct: 401 SWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISG 439
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 123/259 (47%), Gaps = 25/259 (9%)
Query: 42 TLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA 101
+LI G + GL + + Y M ++G P+ TF V+S C+++A +G Q+H VVK
Sbjct: 101 SLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVKM 160
Query: 102 GASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLF 161
G DV + + LI Y+ CG +D K F +VV W+S+I Y + +EA++LF
Sbjct: 161 GLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSLF 220
Query: 162 EQMEQKEFEANDVTFVSLLYACSH----------CG-LKEKGMEFFDLMVKKYRRKPRLE 210
+M + + VT V ++ AC+ C + E G++ +MV
Sbjct: 221 FEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNA-------- 272
Query: 211 HYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGV 270
+VD+ +CG +D A L V N +++ T+LS A I +E+L
Sbjct: 273 ----LVDMYMKCGAIDAAKRLFDEC-VDRNLVLYNTILSNYARQGLAREALAILDEMLQQ 327
Query: 271 NPQDAAPYVLLSNIHASAK 289
P+ +LS I ASA+
Sbjct: 328 GPR-PDRVTMLSAISASAQ 345
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 75/168 (44%), Gaps = 3/168 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D+ ++L M+ + G +V M R+V AW I A G E +
Sbjct: 495 GIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLF 554
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
N M + G +PD + FV V+++CS + QG I + + G S + ++ + R
Sbjct: 555 NQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLMEDHGISPQIEHYGCMVDLLGRA 614
Query: 121 GCLDDSVKTF--LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQ 166
G L ++ + E +DVV W S++AA H E A E++ +
Sbjct: 615 GLLREAFDLIKSMPMEPNDVV-WGSLLAACRVHKNVEMATYAAERINE 661
>gi|15239979|ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520
gi|10177533|dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332010841|gb|AED98224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 620
Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 164/448 (36%), Positives = 259/448 (57%), Gaps = 25/448 (5%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E D V+ +S+ Y+K+G + + R M +N I+W T+I+G Q + ++ L ++
Sbjct: 178 EPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHE 237
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M+ PD ++ + +S+C++L L QG+ IH+ + K +D + LI MY++CG
Sbjct: 238 MQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGE 297
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
++++++ F + V W+++I+ Y +HG G EAI+ F +M++ + N +TF ++L A
Sbjct: 298 MEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTA 357
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
CS+ GL E+G F M + Y KP +EHY C+VDLLGR G LDEA I+ MP+K NA+
Sbjct: 358 CSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAV 417
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMR 302
IW LL AC+ HK+ ++ I E ++ ++P YV +NIHA K+W +E R M+
Sbjct: 418 IWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMK 477
Query: 303 ERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMH 362
E+ V K PG S + ++ H+F GD+SHP +I + +++ GYVP+ +
Sbjct: 478 EQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLL 537
Query: 363 DM-DSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISE 402
D+ D +E+E + HSEKLAI + GLI P K IS+
Sbjct: 538 DLVDDDEREAIVHQHSEKLAITY-----GLIKTKPGTIIRIMKNLRVCKDCHKVTKLISK 592
Query: 403 IKNREIIVRDASRFHHFRNGKCSCGDYW 430
I R+I++RD +RFHHFR+GKCSCGDYW
Sbjct: 593 IYKRDIVMRDRTRFHHFRDGKCSCGDYW 620
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 132/309 (42%), Gaps = 43/309 (13%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
+ W +I G + + E L Y M + TF S++ +CS L+ + QIH
Sbjct: 79 DTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIH 138
Query: 96 AEVVKAGASLDVGVISSLISMYS-------------------------------RCGCLD 124
A++ K G DV ++SLI+ Y+ + G +D
Sbjct: 139 AQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMD 198
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
++ F + + + W++MI+ Y +EA+ LF +M+ + E ++V+ + L AC+
Sbjct: 199 IALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACA 258
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYT---CV-VDLLGRCGYLDEAAALIRNMPVKAN 240
G E+G + Y K R+ + CV +D+ +CG ++EA + +N+ K +
Sbjct: 259 QLGALEQGK-----WIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIK-KKS 312
Query: 241 AIIWKTLLS--ACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
W L+S A H ++ + + +G+ P +L+ + +G F
Sbjct: 313 VQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFY 372
Query: 299 EAMRERNVK 307
R+ N+K
Sbjct: 373 SMERDYNLK 381
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 83/213 (38%), Gaps = 47/213 (22%)
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLE--- 132
+S + CS+ L +QIHA ++K G D I+ +S C+ + FL
Sbjct: 18 MSCLQRCSKQEEL---KQIHARMLKTGLMQDSYAITKFLSF-----CISSTSSDFLPYAQ 69
Query: 133 -----CEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS--- 184
+ D LW+ MI + + E ++ L+++M N TF SLL ACS
Sbjct: 70 IVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLS 129
Query: 185 --------HCGLKEKGME-----------------FFDLMVKKYRRKPRLE--HYTCVVD 217
H + + G E F L + R P + + V+
Sbjct: 130 AFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIK 189
Query: 218 LLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+ G +D A L R M K NAI W T++S
Sbjct: 190 GYVKAGKMDIALTLFRKMAEK-NAISWTTMISG 221
>gi|449513257|ref|XP_004164277.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 558
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 166/445 (37%), Positives = 260/445 (58%), Gaps = 15/445 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D+ ++L +Y GSL KV M R+ ++W T+IA NG A + LD +
Sbjct: 114 GLGSDIFVQNALICVYGYCGSLEMAVKVFDEMSERDSVSWSTVIASFLNNGYASEALDLF 173
Query: 61 NLMRMVG-FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
M++ PD++T +SVIS+ S L L G+ + A + + G + V + ++LI M+SR
Sbjct: 174 EKMQLEDKVVPDEVTMLSVISAISHLGDLELGRWVRAFIGRLGFGVSVALGTALIDMFSR 233
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG +D+S+ F + +V+ W+++I G HG+ EA+ +F M + + + VTF +
Sbjct: 234 CGSIDESIVVFEKMAVRNVLTWTALINGLGIHGRSMEALAMFHSMRKSGVQPDYVTFSGV 293
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L ACSH GL ++G + F+ + K Y P L+HY C+VD+LGR G L+EA + MP+K
Sbjct: 294 LVACSHGGLVKEGWDIFESIRKVYGMDPLLDHYGCMVDILGRAGLLNEAYDFVERMPMKP 353
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
N+IIW+TLL AC H + +A ++ +I ++ VLLSN++ +A RW + R
Sbjct: 354 NSIIWRTLLGACVNHNNLGLAEKVKAKISKISSSQNGDLVLLSNVYGAAGRWVEKASIRS 413
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
MRE+ + KEPG S + + +H+F GD SHP+S +I +L + +++ RGY+ T
Sbjct: 414 KMREKRIGKEPGCSSINVDQTIHEFVSGDNSHPQSEDITKFLSSIIGDLRNRGYMMQTKN 473
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFA----EHTRGLIVMLPF----------KYISEIKN 405
+HD++ EE+E++L +HSEKLA+AFA + R + +M K+IS
Sbjct: 474 VLHDIEEEEREHSLSYHSEKLAVAFAILSMKDKRTIRIMKNLRICYDCHSFMKHISVRFE 533
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
R+II+RD +RFHHF G CSC DYW
Sbjct: 534 RKIIIRDRNRFHHFEKGLCSCHDYW 558
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 118/235 (50%), Gaps = 7/235 (2%)
Query: 21 SLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVIS 80
SL V +P + IA+ T+I ++ L + MR G D TF V+
Sbjct: 37 SLSYARYVFSRIPSPDTIAYNTIIRSHSR-FFPSHSLSYFFSMRSNGIPLDNFTFPFVLK 95
Query: 81 SCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVL 140
+CS L +H+ +VK G D+ V ++LI +Y CG L+ +VK F E D V
Sbjct: 96 ACSRLQI---NLHLHSLIVKYGLGSDIFVQNALICVYGYCGSLEMAVKVFDEMSERDSVS 152
Query: 141 WSSMIAAYGFHGKGEEAINLFEQME-QKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLM 199
WS++IA++ +G EA++LFE+M+ + + ++VT +S++ A SH G E G +
Sbjct: 153 WSTVIASFLNNGYASEALDLFEKMQLEDKVVPDEVTMLSVISAISHLGDLELG-RWVRAF 211
Query: 200 VKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
+ + + T ++D+ RCG +DE+ + M V+ N + W L++ H
Sbjct: 212 IGRLGFGVSVALGTALIDMFSRCGSIDESIVVFEKMAVR-NVLTWTALINGLGIH 265
>gi|302761366|ref|XP_002964105.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
gi|300167834|gb|EFJ34438.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
Length = 713
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 179/449 (39%), Positives = 262/449 (58%), Gaps = 31/449 (6%)
Query: 7 VAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV 66
V +L ++Y K G + + +V+ MP+R ++W +IA AQNG A + ++ + M +
Sbjct: 271 VVAGTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLE 330
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGA-SLDVGVISSLISMYSRCGCLDD 125
G P IT +SV+ SC+ L TL G++IHA + + + S + +++++I+MY +CG L+
Sbjct: 331 GAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPSFSQSLMLLNAVITMYGKCGNLEL 390
Query: 126 SVKTFLEC---EYSDVVLWSSMIAAYGFHGKGEEAINLFEQME-QKEFEANDVTFVSLLY 181
+ + F EC VV W++MI AY +G GEEAI LF++M E N VTF+S+L
Sbjct: 391 AREVF-ECVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEMLIDGGTEPNRVTFLSVLC 449
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALI-RNMPVKAN 240
ACSH G E+ E F M + P +HY C+VDLLGR G L EA L+ R+ +A+
Sbjct: 450 ACSHLGQLEQAWEHFCSMGPDFGVPPAGDHYCCLVDLLGRAGRLGEAEKLLLRHKDFEAD 509
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+ W LSAC+ + + + R A+ + + P++ A VLLSN++A+ R V+ R
Sbjct: 510 VVCWIAFLSACQMNGDLERSQRAAKRVSELEPENVAGRVLLSNVYAAKGRRADVARIRNE 569
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+ VKK G SW+EI N+VH+F + D SHPR +EI LE L E+K GYVPDT
Sbjct: 570 MKSSGVKKFAGRSWIEINNRVHEFMVSDVSHPRKLEIYSELERLHREIKEAGYVPDTKMV 629
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
+ D+D E+K L +HSE+LA+A G+I P K+IS
Sbjct: 630 LRDVDEEKKVQLLGYHSERLAMAL-----GIISTPPGTTLRVVKNLRVCSDCHAATKFIS 684
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+I R+IIVRD SRFHHF++G CSCGDYW
Sbjct: 685 QIVGRQIIVRDTSRFHHFKDGVCSCGDYW 713
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 129/278 (46%), Gaps = 5/278 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
E+D SSL MY + + E E+ P ++V+ W +I+ A N L+
Sbjct: 163 ALEIDSHVESSLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISAYAHNWRTSRALELV 222
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVIS-SLISMYSR 119
M + G + T+VS++ +C+ L G H G V++ +L+++Y +
Sbjct: 223 RRMDLEGIKLGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTVVAGTLVNLYGK 282
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG +DD+ + V W++MIAAY +G EAINLF+ M+ + E +D+T +S+
Sbjct: 283 CGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISV 342
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
+ +C+ G G + L V+ + G+CG L+ A + +P++
Sbjct: 343 VDSCAVLGTLSLGKRIHARIRSSPSFSQSLMLLNAVITMYGKCGNLELAREVFECVPLRT 402
Query: 240 NAII-WKTLLSACKTHKSTDMAGRIAEEIL---GVNPQ 273
+++ W ++ A + + A + +E+L G P
Sbjct: 403 RSVVTWTAMIRAYAQNGVGEEAIELFQEMLIDGGTEPN 440
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 119/242 (49%), Gaps = 1/242 (0%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G+ L Y K GSL + + + N +W L+A AQNG ++ M G
Sbjct: 70 GNVLVDAYSKHGSLHGAQLAFGRITLHNAHSWNILMAAYAQNGHPRGAATLFHWMCSQGV 129
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
RP+ +T + + +C+ L G++++ + +D V SSLI+MY RC ++++ +
Sbjct: 130 RPNAVTLSTALLACTAARNLALGRKLNELIASEALEIDSHVESSLITMYGRCREIEEAER 189
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F DVV W++MI+AY + + A+ L +M+ + + T+VSLL AC+
Sbjct: 190 AFDRSPEKDVVCWTAMISAYAHNWRTSRALELVRRMDLEGIKLGLPTYVSLLDACASTMD 249
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
G+ F + +V+L G+CG +D+A ++ MPV+ ++ W ++
Sbjct: 250 LRNGVAFHQRAAAIGLDRSSTVVAGTLVNLYGKCGRVDDARRVLDAMPVR-TSVSWTAMI 308
Query: 249 SA 250
+A
Sbjct: 309 AA 310
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 90/180 (50%), Gaps = 16/180 (8%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPI--RNVIAWITLIAGKAQNGLAEDVLDQ 59
F L+ +++ MY K G+L +V +P+ R+V+ W +I AQNG+ E+ ++
Sbjct: 368 FSQSLMLLNAVITMYGKCGNLELAREVFECVPLRTRSVVTWTAMIRAYAQNGVGEEAIEL 427
Query: 60 YNLMRM-VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISS------ 112
+ M + G P+++TF+SV+ +CS LGQ +Q G D GV +
Sbjct: 428 FQEMLIDGGTEPNRVTFLSVLCACSH---LGQLEQAWEHFCSMGP--DFGVPPAGDHYCC 482
Query: 113 LISMYSRCGCLDDSVKTFLECE--YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFE 170
L+ + R G L ++ K L + +DVV W + ++A +G E + +++ + E E
Sbjct: 483 LVDLLGRAGRLGEAEKLLLRHKDFEADVVCWIAFLSACQMNGDLERSQRAAKRVSELEPE 542
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 72/164 (43%), Gaps = 4/164 (2%)
Query: 88 LGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAA 147
L + +++HA++ + + + L+ YS+ G L + F + W+ ++AA
Sbjct: 48 LDEVRKLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGRITLHNAHSWNILMAA 107
Query: 148 YGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRR-K 206
Y +G A LF M + N VT + L AC+ G + +L+ +
Sbjct: 108 YAQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRKLNELIASEALEID 167
Query: 207 PRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+E + ++ + GRC ++EA P K + + W ++SA
Sbjct: 168 SHVE--SSLITMYGRCREIEEAERAFDRSPEK-DVVCWTAMISA 208
>gi|357464871|ref|XP_003602717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491765|gb|AES72968.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 554
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 169/449 (37%), Positives = 257/449 (57%), Gaps = 20/449 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ ++ ++L + Y GSL K+ M R++++W TLI+ +N L + L +
Sbjct: 107 GFDTNIFVQNALINAYGSRGSLDVAVKLFDEMRRRDIVSWSTLISCLVKNNLPAEALSVF 166
Query: 61 NLMRMVGFRP-----DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLIS 115
M+M G R D+ +SVIS+ S L + G +H+ +V+ G + V + ++LI+
Sbjct: 167 QQMQM-GHRDIRNWLDRAIMLSVISAVSSLGVIELGIWVHSFIVRMGIVMTVPLGTALIN 225
Query: 116 MYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVT 175
MYSRCG +D SVK F E +VV W+++I HG+ EA+ +F +M++ + +
Sbjct: 226 MYSRCGLIDRSVKVFDEMPERNVVTWTALINGLAVHGRSREALKVFYEMKESGLKPDGAL 285
Query: 176 FVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM 235
F+ +L ACSH GL E G F+ M ++ KP LEHY C+VDLLGR G + EA + M
Sbjct: 286 FIGVLVACSHGGLVEDGWRVFESMRDEFGIKPMLEHYGCMVDLLGRAGLILEAFDFVEEM 345
Query: 236 PVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVS 295
P+K N++IW+TLL AC H +A + E I+ ++P YVLLSN + W G +
Sbjct: 346 PLKPNSVIWRTLLGACVNHNHLGLAEKARERIIELDPYHDGDYVLLSNAYGRVGNWGGKA 405
Query: 296 EFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVP 355
R +M++ + KEPG+S++ I VH+F GD HP+ EI +L + +KL GY P
Sbjct: 406 GLRNSMKQNRIVKEPGLSFVHIDQVVHEFVSGDHVHPQWEEITKFLASIIDTVKLGGYTP 465
Query: 356 DTGADMHDMDSEEKEYNLKHHSEKLAIAFA---EHTRGLIVMLP-----------FKYIS 401
+T + +HD+ EEKE+ L +HSEKLA+AF R I ++ K+ S
Sbjct: 466 NTSSVLHDIQDEEKEHCLGYHSEKLAVAFVLLYHRDRRTIRVIKNLRICYDCHDFMKHAS 525
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
I +R+II+RD +RFHHF G CSC D+W
Sbjct: 526 GIFDRDIIIRDRNRFHHFSKGLCSCQDFW 554
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 89/184 (48%), Gaps = 8/184 (4%)
Query: 98 VVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEA 157
+ K G ++ V ++LI+ Y G LD +VK F E D+V WS++I+ + EA
Sbjct: 103 IFKLGFDTNIFVQNALINAYGSRGSLDVAVKLFDEMRRRDIVSWSTLISCLVKNNLPAEA 162
Query: 158 INLFEQMEQKEFEAND----VTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYT 213
+++F+QM+ + + +S++ A S G+ E G+ +V+ + T
Sbjct: 163 LSVFQQMQMGHRDIRNWLDRAIMLSVISAVSSLGVIELGIWVHSFIVRMGIVM-TVPLGT 221
Query: 214 CVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEI--LGVN 271
++++ RCG +D + + MP + N + W L++ H + A ++ E+ G+
Sbjct: 222 ALINMYSRCGLIDRSVKVFDEMP-ERNVVTWTALINGLAVHGRSREALKVFYEMKESGLK 280
Query: 272 PQDA 275
P A
Sbjct: 281 PDGA 284
>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
Length = 1108
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 170/450 (37%), Positives = 256/450 (56%), Gaps = 29/450 (6%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E D+ ++L +MY G E M R++++W + A AQ GLA++ + +
Sbjct: 668 GLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLF 727
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M++ G +PDK+TF + ++ A + G+ H ++G DV V + L+ +Y++C
Sbjct: 728 RHMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHGLAAESGLDSDVSVATGLVKLYAKC 787
Query: 121 GCLDDSVKTFL-ECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G LD+++ F C+++ VVL +++I A HG EEA+ +F +M+Q+ + T VS+
Sbjct: 788 GKLDEAISLFRGACQWT-VVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSI 846
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
+ AC H G+ E+G F M + + P LEHY C VDLLGR G L+ A +IR MP +
Sbjct: 847 ISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFED 906
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
N ++W +LL CK ++ R A+ IL ++P ++A +V+LSNI+ + +W+ R+
Sbjct: 907 NTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYCATGKWKDADVDRK 966
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
+ ++NVK PG+SWLEI QVH+F GD+SHP++ EI + L++L M+ GY D G
Sbjct: 967 KLLDQNVKNAPGMSWLEIGKQVHEFVAGDRSHPQTDEIYVVLDKLELLMRRAGYEADKGL 1026
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYI 400
D D E KE L +HSE++AIAF GLI P KYI
Sbjct: 1027 DAED---ELKEKALGYHSERIAIAF-----GLIATPPDTTLKIVKNLRVCGDCHTATKYI 1078
Query: 401 SEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
S I REIIVRD+ RFHHF NG CSC D W
Sbjct: 1079 SMIMGREIIVRDSLRFHHFSNGTCSCKDCW 1108
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 148/295 (50%), Gaps = 8/295 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIR---NVIAWITLIAGKAQNGLAEDVL 57
G D +AG++L +MY K G V + M R ++++W +I+ + G D +
Sbjct: 260 GLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAM 319
Query: 58 DQYNLMRMVGFRPDKITFVSVISSCSELAT-LGQGQQIHAEVVKAGASLDVGVISSLISM 116
+ +R+ G RP+ +T ++++++ + G ++ H + ++G DV V +++ISM
Sbjct: 320 AIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWESGYLRDVVVGNAIISM 379
Query: 117 YSRCGCLDDSVKTFLECEYS-DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVT 175
Y++CG + F + DV+ W++M+ A + +N F M + N V+
Sbjct: 380 YAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVS 439
Query: 176 FVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM 235
F+++L ACS+ + G + L++ + R T +V + G+CG + EA + + M
Sbjct: 440 FIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSIAEAELVFKEM 499
Query: 236 PVKANAII-WKTLLSA-CKTHKSTDMAGRIAEEILGVNPQDAAPYV-LLSNIHAS 287
P+ + +++ W +L A + +S + G + E + G DA + +LS+ + S
Sbjct: 500 PLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCS 554
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 140/292 (47%), Gaps = 8/292 (2%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L M+ + L + V M +V++W +++ A+N ++V + M++ G
Sbjct: 576 TALISMHGRCRELEQARSVFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVI 635
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
PDK T + + +C + TLG G+ IHA V + G D+ V ++L++MYS CG +++
Sbjct: 636 PDKFTLATTLDTCLDSTTLGLGKIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSF 695
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F + D+V W+ M AAY G +EA+ LF M+ + + + +TF + L L
Sbjct: 696 FETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALV 755
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
G + F + + + T +V L +CG LDEA +L R + ++ ++
Sbjct: 756 SDG-KLFHGLAAESGLDSDVSVATGLVKLYAKCGKLDEAISLFRG-ACQWTVVLLNAIIG 813
Query: 250 ACKTH----KSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEF 297
A H ++ M ++ +E GV P A ++S + +G S F
Sbjct: 814 ALAQHGFSEEAVKMFWKMQQE--GVRPDVATLVSIISACGHAGMVEEGCSSF 863
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 129/266 (48%), Gaps = 28/266 (10%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E L G+ L +MY++ GSL E + M RNV++W LI+ AQ+G +
Sbjct: 55 GLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEERNVVSWTALISANAQSGAFARAFALF 114
Query: 61 NLMRM-VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAG----ASLDVGVISSLIS 115
M + P+ T V+++++C+ L G+ IHA + + G ++ V +++I+
Sbjct: 115 RTMLLESSAAPNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMIN 174
Query: 116 MYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKG-EEAINLFEQMEQKEFEANDV 174
MY++CG +D++ FL DVV W++M AY + +A+ +F +M + N +
Sbjct: 175 MYAKCGSPEDAIAVFLTIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVI 234
Query: 175 TFVSLLYACS--------HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLD 226
TF++ L AC+ H L E G+ F L ++++ G+CG +
Sbjct: 235 TFITALGACTSLRDGTWLHSLLHEAGLGFDPLA------------GNALINMYGKCGDWE 282
Query: 227 EAAALIRNMPVKA--NAIIWKTLLSA 250
A + + M + + + W ++SA
Sbjct: 283 GAYGVFKAMASRQELDLVSWNAMISA 308
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 116/280 (41%), Gaps = 45/280 (16%)
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
+ +++ SC + L +G++ H + AG + + + LI+MY RCG L+++ F + E
Sbjct: 28 YTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKME 87
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEA-NDVTFVSLLYACS--------- 184
+VV W+++I+A G A LF M + A N T V++L AC+
Sbjct: 88 ERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGR 147
Query: 185 --HCGLKEKGME--------FFDLMVKKYRRKPRLEHYTC---------VVDLLGRCG-- 223
H + E G+E + M+ Y + E VV G
Sbjct: 148 SIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAMAGAY 207
Query: 224 -----YLDEAAALIRNM---PVKANAIIWKTLLSACKTHK-STDMAGRIAEEILGVNPQD 274
+ +A + R M P+ N I + T L AC + + T + + E LG +P
Sbjct: 208 AQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRDGTWLHSLLHEAGLGFDPLA 267
Query: 275 AAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSW 314
+ N++ W+G +AM R ++ VSW
Sbjct: 268 GNALI---NMYGKCGDWEGAYGVFKAMASR--QELDLVSW 302
>gi|15239085|ref|NP_201360.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180382|sp|Q9LSL8.1|PP446_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65570
gi|8978285|dbj|BAA98176.1| unnamed protein product [Arabidopsis thaliana]
gi|332010689|gb|AED98072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 178/448 (39%), Positives = 252/448 (56%), Gaps = 24/448 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE L + +SL MY++ + + +V + + N ++W +LI+G QNG E L ++
Sbjct: 297 GFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEF 356
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M +P+ T S + CS LA +G+QIH V K G D S LI +Y +C
Sbjct: 357 RKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKC 416
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
GC D + F DV+ ++MI +Y +G G EA++LFE+M + NDVT +S+L
Sbjct: 417 GCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVL 476
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRL----EHYTCVVDLLGRCGYLDEAAALIRNMP 236
AC++ L E+G E FD RK ++ +HY C+VDLLGR G L+EA L +
Sbjct: 477 LACNNSRLVEEGCELFDSF-----RKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEV- 530
Query: 237 VKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSE 296
+ + ++W+TLLSACK H+ +MA RI +IL + P D +L+SN++AS +W V E
Sbjct: 531 INPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIE 590
Query: 297 FREAMRERNVKKEPGVSWLEIKNQVHQFTMGDK-SHPRSMEIDLYLEELTSEMKLRGYVP 355
+ M++ +KK P +SW+EI + H F GD SHP S +I LEEL + K GYV
Sbjct: 591 MKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSKDLGYVE 650
Query: 356 DTGADMHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVMLP-----------FKYISE 402
D DM+ KE +L HSEKLAIAFA + G I +L K +S
Sbjct: 651 DKSCVFQDMEETAKERSLHQHSEKLAIAFAVWRNVGGSIRILKNLRVCVDCHSWIKIVSR 710
Query: 403 IKNREIIVRDASRFHHFRNGKCSCGDYW 430
+ REII RD+ RFHHFR+G CSCGDYW
Sbjct: 711 VMKREIICRDSKRFHHFRDGSCSCGDYW 738
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 146/286 (51%), Gaps = 9/286 (3%)
Query: 1 GFEL-DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQ 59
G E+ ++ GS+L MY+K G E + V+ + ++V+ LI G +Q G + +
Sbjct: 195 GLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKA 254
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ M + +P++ T+ SV+ SC L +G G+ IH +VK+G + +SL++MY R
Sbjct: 255 FQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLR 314
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
C +DDS++ F EY + V W+S+I+ +G+ E A+ F +M + + N T S
Sbjct: 315 CSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSA 374
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L CS+ + E+G + + V KY + ++DL G+CG D A L+ + +
Sbjct: 375 LRGCSNLAMFEEGRQIHGI-VTKYGFDRDKYAGSGLIDLYGKCGCSD-MARLVFDTLSEV 432
Query: 240 NAIIWKTLLSACKTH----KSTDMAGRIAEEILGVNPQDAAPYVLL 281
+ I T++ + + ++ D+ R+ LG+ P D +L
Sbjct: 433 DVISLNTMIYSYAQNGFGREALDLFERMIN--LGLQPNDVTVLSVL 476
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 124/255 (48%), Gaps = 3/255 (1%)
Query: 7 VAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV 66
++GS L +K G + +V M R+++ W +LIA ++ +++ ++ Y LM
Sbjct: 100 ISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITN 159
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASL-DVGVISSLISMYSRCGCLDD 125
PD+ T SV + S+L+ + Q+ H V G + +V V S+L+ MY + G +
Sbjct: 160 NVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTRE 219
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
+ E DVVL +++I Y G+ EA+ F+ M ++ + N+ T+ S+L +C +
Sbjct: 220 AKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGN 279
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
G LMVK + L T ++ + RC +D++ + + + N + W
Sbjct: 280 LKDIGNGKLIHGLMVKS-GFESALASQTSLLTMYLRCSLVDDSLRVFKCIEY-PNQVSWT 337
Query: 246 TLLSACKTHKSTDMA 260
+L+S + +MA
Sbjct: 338 SLISGLVQNGREEMA 352
>gi|115487662|ref|NP_001066318.1| Os12g0181900 [Oryza sativa Japonica Group]
gi|77553160|gb|ABA95956.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113648825|dbj|BAF29337.1| Os12g0181900 [Oryza sativa Japonica Group]
gi|125578708|gb|EAZ19854.1| hypothetical protein OsJ_35439 [Oryza sativa Japonica Group]
Length = 584
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 173/446 (38%), Positives = 266/446 (59%), Gaps = 16/446 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D ++L +Y K G L K+ + R+V+AW +I+G QNGLAE ++ Y
Sbjct: 139 GFGSDRFVQTALVVLYSKCGQLPVARKLFDAIRDRSVVAWNAMISGYEQNGLAERAIEVY 198
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M++ PD TFV+ +S+C++ L G+++ +V + V + S+L++MY+RC
Sbjct: 199 REMQVAQVVPDSATFVATLSACAQAGALDLGREVERRIVSDQMDVSVFLGSALVNMYARC 258
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + F + +VV W+SMIA YG HG G EAI LF M ++ NDVTFV++L
Sbjct: 259 GLVSKARDWFDRLQERNVVTWTSMIAGYGMHGHGREAIKLFHLMRREGPTPNDVTFVAVL 318
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALI-RNMPVKA 239
AC+H GL +G FD M + Y PR EHY +VD+ GR G LD+A I ++P +
Sbjct: 319 AACAHAGLVNEGRNAFDSMKRVYGLVPRAEHYCSMVDMYGRAGLLDDAMQFICDSIPEEP 378
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
+W +L ACK HK+ ++ +AE ++ + P++ + VLLSNI+A + + V + R
Sbjct: 379 GPEVWTAMLGACKMHKNFNLGVEVAERLIALEPENPSHRVLLSNIYALSGKMNHVEKVRN 438
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M +R +KK+ G S +E+ H F MG+KSH ++ EI YLEEL + GYVP+T +
Sbjct: 439 VMIKRRLKKQIGYSLIELGGTSHLFRMGEKSHQQTREIYRYLEELIHRISDAGYVPETDS 498
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAF-----AEHTRGLIVM----------LPFKYISEIK 404
+H+++ EE+E L++HSEKLA+A+ + T + V+ L K++S ++
Sbjct: 499 VLHELEEEEREVALRYHSEKLAVAYGLMMSSGSTAPIRVIKNLRICGDCHLAIKFMSSVE 558
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
+REIIVRD RFHHF++GKCSC +YW
Sbjct: 559 SREIIVRDKHRFHHFKDGKCSCLEYW 584
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 98/213 (46%), Gaps = 2/213 (0%)
Query: 42 TLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA 101
+L A GL + + Y + F + +C++L+ L G +HA V
Sbjct: 79 SLARAAAHRGLPGEAIAFYGRLLAAALPFSSFAFTAAAKACADLSALRTGMAVHAHSVLL 138
Query: 102 GASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLF 161
G D V ++L+ +YS+CG L + K F VV W++MI+ Y +G E AI ++
Sbjct: 139 GFGSDRFVQTALVVLYSKCGQLPVARKLFDAIRDRSVVAWNAMISGYEQNGLAERAIEVY 198
Query: 162 EQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGR 221
+M+ + + TFV+ L AC+ G + G E +V + + + +V++ R
Sbjct: 199 REMQVAQVVPDSATFVATLSACAQAGALDLGREVERRIVSD-QMDVSVFLGSALVNMYAR 257
Query: 222 CGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
CG + +A + + N + W ++++ H
Sbjct: 258 CGLVSKARDWFDRLQER-NVVTWTSMIAGYGMH 289
>gi|449442481|ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
gi|449505311|ref|XP_004162432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
Length = 679
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 162/445 (36%), Positives = 264/445 (59%), Gaps = 24/445 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D + +SL + +MK G + +++ MP +NV++W T++ G +QNG E L+ + M
Sbjct: 240 DTGSWNSLINGFMKMGDMGRAKELFVKMPEKNVVSWTTMVNGFSQNGDPEKALETFFCML 299
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G RP+ T VS +S+C+++ L G +IH + G L++ + ++L+ MY++CG ++
Sbjct: 300 EEGARPNDYTIVSALSACAKIGALDAGLRIHNYLSGNGFKLNLVIGTALVDMYAKCGNIE 359
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ K F E + +++WS MI + HG +A+ FE M+ + + V F+++L ACS
Sbjct: 360 HAEKVFHETKEKGLLIWSVMIWGWAIHGHFRKALQYFEWMKFTGTKPDSVVFLAVLNACS 419
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H G +G++FFD M + Y +P ++HYT VVD+LGR G LDEA IR MP+ + ++W
Sbjct: 420 HSGQVNEGLKFFDNMRRGYLIEPSMKHYTLVVDMLGRAGRLDEALKFIRAMPITPDFVVW 479
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
L AC+THK+ +MA ++++L + P+ YV LSN +AS RW R +MR+
Sbjct: 480 GALFCACRTHKNVEMAELASKKLLQLEPKHPGSYVFLSNAYASVGRWDDAERVRVSMRDH 539
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
K+PG S++E+ +++H+F GD +H R++EI L+E+++ + +GY + +H++
Sbjct: 540 GAHKDPGWSFIEVDHKLHRFVAGDNTHNRAVEIYSKLDEISASAREKGYTKEIECVLHNI 599
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKN 405
+ EEKE L +HSEKLA+AF G++ P KY S++
Sbjct: 600 EEEEKEEALGYHSEKLALAF-----GIVSTRPGTTVRIVKNLRVCVDCHSFMKYASKMSK 654
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
REII+RD RFHHF +G CSCGDYW
Sbjct: 655 REIILRDMKRFHHFNDGVCSCGDYW 679
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 82/160 (51%), Gaps = 4/160 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+L+LV G++L MY K G++ EKV + ++ W +I G A +G L +
Sbjct: 337 GFKLNLVIGTALVDMYAKCGNIEHAEKVFHETKEKGLLIWSVMIWGWAIHGHFRKALQYF 396
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV--ISSLISMYS 118
M+ G +PD + F++V+++CS + +G + + ++ G ++ + + ++ M
Sbjct: 397 EWMKFTGTKPDSVVFLAVLNACSHSGQVNEGLKFF-DNMRRGYLIEPSMKHYTLVVDMLG 455
Query: 119 RCGCLDDSVKTFLECEYS-DVVLWSSMIAAYGFHGKGEEA 157
R G LD+++K + D V+W ++ A H E A
Sbjct: 456 RAGRLDEALKFIRAMPITPDFVVWGALFCACRTHKNVEMA 495
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 137/352 (38%), Gaps = 70/352 (19%)
Query: 28 VIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELAT 87
+ + ++N + LI G A+N E + + LM PD++TF V+ S + L+
Sbjct: 96 IFQRFELKNSYLFNALIRGLAENSRFESSISFFVLMLKWKISPDRLTFPFVLKSAAALSN 155
Query: 88 LGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYS----DVVLWSS 143
G G+ +H ++K G D V SL+ MY + L ++K F E S V++W+
Sbjct: 156 GGVGRALHCGILKFGLEFDSFVRVSLVDMYVKVEELGSALKVFDESPESVKNGSVLIWNV 215
Query: 144 MIAAYGFHGKGEEAINLFEQMEQKEF---------------------------EANDVTF 176
+I Y G +A LF+ M +K+ E N V++
Sbjct: 216 LIHGYCRMGDLVKATELFDSMPKKDTGSWNSLINGFMKMGDMGRAKELFVKMPEKNVVSW 275
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKP---------------------RLEHY--- 212
+++ S G EK +E F M+++ R R+ +Y
Sbjct: 276 TTMVNGFSQNGDPEKALETFFCMLEEGARPNDYTIVSALSACAKIGALDAGLRIHNYLSG 335
Query: 213 ----------TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGR 262
T +VD+ +CG ++ A + K +IW ++ H A +
Sbjct: 336 NGFKLNLVIGTALVDMYAKCGNIEHAEKVFHETKEKG-LLIWSVMIWGWAIHGHFRKALQ 394
Query: 263 IAE--EILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGV 312
E + G P +L+ S + +G+ +F + MR R EP +
Sbjct: 395 YFEWMKFTGTKPDSVVFLAVLNACSHSGQVNEGL-KFFDNMR-RGYLIEPSM 444
>gi|15229194|ref|NP_190540.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183401|sp|Q9M2Y7.1|PP274_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49710
gi|6723416|emb|CAB66909.1| putative protein [Arabidopsis thaliana]
gi|332645058|gb|AEE78579.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 721
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 174/452 (38%), Positives = 268/452 (59%), Gaps = 22/452 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGS---LVEGEKVIRLMPIRNVIAWITLIAGKAQNG-LAEDV 56
GF + GS L Y K G + + EKV + + +++ W T+I+G + N L+E+
Sbjct: 270 GFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEA 329
Query: 57 LDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAG-ASLDVGVISSLIS 115
+ + M+ +G RPD +FV V S+CS L++ Q +QIH +K+ S + V ++LIS
Sbjct: 330 VKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALIS 389
Query: 116 MYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVT 175
+Y + G L D+ F + V ++ MI Y HG G EA+ L+++M N +T
Sbjct: 390 LYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKIT 449
Query: 176 FVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM 235
FV++L AC+HCG ++G E+F+ M + ++ +P EHY+C++DLLGR G L+EA I M
Sbjct: 450 FVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAM 509
Query: 236 PVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVS 295
P K ++ W LL AC+ HK+ +A R A E++ + P A PYV+L+N++A A++W+ ++
Sbjct: 510 PYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMA 569
Query: 296 EFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVP 355
R++MR + ++K+PG SW+E+K + H F D SHP E++ YLEE+ +MK GYV
Sbjct: 570 SVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVM 629
Query: 356 DTGADM---HDMDSEEKEYNLKHHSEKLAIAFA-EHTRG---LIVML----------PFK 398
D M + ++E L HHSEKLA+AF TR L+V+ K
Sbjct: 630 DKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVVKNLRICGDCHNAIK 689
Query: 399 YISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
++S + REIIVRD RFH F++GKCSCGDYW
Sbjct: 690 FMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 146/317 (46%), Gaps = 10/317 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLM-PIRNVIAWITLIAGKAQNGLAEDVLDQ 59
GF+ ++ Y K G L E V M +R+ ++W ++I Q+ L
Sbjct: 168 GFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALAL 227
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
Y M GF+ D T SV+++ + L L G+Q H +++KAG + V S LI YS+
Sbjct: 228 YKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSK 287
Query: 120 CGCLD---DSVKTFLECEYSDVVLWSSMIAAYGFHGK-GEEAINLFEQMEQKEFEANDVT 175
CG D DS K F E D+V+W++MI+ Y + + EEA+ F QM++ +D +
Sbjct: 288 CGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCS 347
Query: 176 FVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM 235
FV + ACS+ + + L +K + R+ ++ L + G L +A + M
Sbjct: 348 FVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRM 407
Query: 236 PVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQG 293
P + NA+ + ++ H A + + +L G+ P +LS K +G
Sbjct: 408 P-ELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEG 466
Query: 294 VSEFREAMRERNVKKEP 310
E+ M+E K EP
Sbjct: 467 -QEYFNTMKE-TFKIEP 481
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 122/253 (48%), Gaps = 10/253 (3%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E ++ + + + Y K + ++ +P + +++ TLI+G A + +
Sbjct: 71 EPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKR 130
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
MR +GF D T +I++C + L +Q+H V G V ++ ++ YS+ G
Sbjct: 131 MRKLGFEVDGFTLSGLIAACCDRVDL--IKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGL 188
Query: 123 LDDSVKTFLEC-EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
L ++V F E D V W+SMI AYG H +G +A+ L+++M K F+ + T S+L
Sbjct: 189 LREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLN 248
Query: 182 ACSHCGLKEKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLD---EAAALIRNMPV 237
A + G +F ++K + + + + ++D +CG D ++ + + + +
Sbjct: 249 ALTSLDHLIGGRQFHGKLIKAGFHQNSHVG--SGLIDFYSKCGGCDGMYDSEKVFQEI-L 305
Query: 238 KANAIIWKTLLSA 250
+ ++W T++S
Sbjct: 306 SPDLVVWNTMISG 318
>gi|326509777|dbj|BAJ87104.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 321 bits (822), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 161/445 (36%), Positives = 261/445 (58%), Gaps = 25/445 (5%)
Query: 6 LVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRM 65
+V+ +++ Y G+L + ++ +P ++ I W +I G Q+G + L + M
Sbjct: 185 VVSVTAMLTCYANMGALDDARRLFDGLPRKDFICWNAMIDGYTQHGKPNEALQLFRRMLR 244
Query: 66 VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAG-ASLDVGVISSLISMYSRCGCLD 124
PD++T V V+S+ ++L T+ G+ +H+ V + L+V V ++L+ MY +CG L+
Sbjct: 245 SSAEPDEVTVVLVLSAVAQLGTVESGKWLHSYVKNSRCVQLNVRVATALVDMYCKCGSLE 304
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D+V F D+V+W++MI Y HG +A+ +F Q+ + D+TF+ LL ACS
Sbjct: 305 DAVAVFHGIGNKDIVVWNAMINGYAMHGDSRKALEMFVQLRDQGLWPTDITFIGLLNACS 364
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL E+G FF M +Y P++EHY C+VDLLGR G ++EA L++++ + +A++W
Sbjct: 365 HSGLVEEGRSFFQSMEHEYGIDPKIEHYGCMVDLLGRAGLIEEAFHLVQSLTITPDAVMW 424
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
+LL+AC+ HK+ + RIA+ ++ ++ Y+LLSNI+A+ +W+ V+ R M+
Sbjct: 425 VSLLAACRLHKNMALGQRIADFLVANGLANSGMYILLSNIYAAVGKWEEVARVRSMMKAS 484
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
++KEPG S +EI +V++F GD SHP + EI L+++ + +K G+VP T +HD+
Sbjct: 485 GIQKEPGCSAIEIDRKVYEFVAGDMSHPCTDEIYAMLDKMNALVKEHGHVPQTELVLHDL 544
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKN 405
D KE L HSEKLA+AF GLI P K IS+I +
Sbjct: 545 DEATKEKALAVHSEKLAVAF-----GLISSRPGSTIKIVKNLRACSDCHAVLKLISKITS 599
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
R+I+ RD +RFHHF +G C+CGDYW
Sbjct: 600 RKIVFRDRNRFHHFVDGSCTCGDYW 624
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 140/345 (40%), Gaps = 43/345 (12%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + D L Y SG L ++ I + + I + GL L
Sbjct: 51 GLDSDRAVAFRLQRAYAASGRLDHSLTLLGRTKDPTTIFYTSAIHAHSSRGLHLPGLALL 110
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISM---- 116
+ M G P T + + +C L+ G+ +HA K S D V ++L+SM
Sbjct: 111 SDMLSEGLLPTAHTLSASLPACRGLSL---GRALHAYAFKLALSGDSYVATALLSMYARA 167
Query: 117 ---------------------------YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYG 149
Y+ G LDD+ + F D + W++MI Y
Sbjct: 168 GDAAAARALFDEMPDPHVVSVTAMLTCYANMGALDDARRLFDGLPRKDFICWNAMIDGYT 227
Query: 150 FHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYR-RKPR 208
HGK EA+ LF +M + E ++VT V +L A + G E G ++ VK R +
Sbjct: 228 QHGKPNEALQLFRRMLRSSAEPDEVTVVLVLSAVAQLGTVESG-KWLHSYVKNSRCVQLN 286
Query: 209 LEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH----KSTDMAGRIA 264
+ T +VD+ +CG L++A A+ + K + ++W +++ H K+ +M ++
Sbjct: 287 VRVATALVDMYCKCGSLEDAVAVFHGIGNK-DIVVWNAMINGYAMHGDSRKALEMFVQLR 345
Query: 265 EEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKE 309
++ G+ P D LL+ S +G S F+ E + +
Sbjct: 346 DQ--GLWPTDITFIGLLNACSHSGLVEEGRSFFQSMEHEYGIDPK 388
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 73/151 (48%), Gaps = 2/151 (1%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
+L++ ++L MY K GSL + V + ++++ W +I G A +G + L+ +
Sbjct: 284 QLNVRVATALVDMYCKCGSLEDAVAVFHGIGNKDIVVWNAMINGYAMHGDSRKALEMFVQ 343
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVV-KAGASLDVGVISSLISMYSRCG 121
+R G P ITF+ ++++CS + +G+ + + G + ++ + R G
Sbjct: 344 LRDQGLWPTDITFIGLLNACSHSGLVEEGRSFFQSMEHEYGIDPKIEHYGCMVDLLGRAG 403
Query: 122 CLDDSVKTFLECEYS-DVVLWSSMIAAYGFH 151
++++ + D V+W S++AA H
Sbjct: 404 LIEEAFHLVQSLTITPDAVMWVSLLAACRLH 434
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 321 bits (822), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 170/449 (37%), Positives = 257/449 (57%), Gaps = 26/449 (5%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E D+V+ +++ Y K G +V +MP ++ AW LI+ QNG ++ L +
Sbjct: 295 EKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRE 354
Query: 63 MRM-VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
+++ +P+++T S +++C++L + G IH + K G L+ + +SLI MYS+CG
Sbjct: 355 LQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKCG 414
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
L+ +++ F E DV +WS+MIA HG G AI+LF +M++ + + N VTF +LL
Sbjct: 415 HLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLC 474
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
ACSH GL ++G FF+ M Y P +HY C+VD+LGR G L+EA LI MP+ +A
Sbjct: 475 ACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVDILGRAGCLEEAVELIEKMPIVPSA 534
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
+W LL AC+ + + ++A +L + + YVLLSNI+A A +W VS R+ M
Sbjct: 535 SVWGALLGACRIYGNVELAEMACSRLLETDSNNHGAYVLLSNIYAKAGKWDCVSRLRQHM 594
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
+ ++KEPG S +E+ +H+F +GD SHP S EI L+E+ + +K GYV D +
Sbjct: 595 KVSGLEKEPGCSSIEVNGIIHEFLVGDNSHPLSTEIYSKLDEIVARIKSTGYVSDESHLL 654
Query: 362 HDMDSEE-KEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
++ E KE+ L HSEKLAIA+ GLI M P K IS
Sbjct: 655 QFVEEEYMKEHALNLHSEKLAIAY-----GLIRMEPSQPIRIVKNLRVCGDCHSVAKLIS 709
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
++ NR+I++RD RFHHF G CSC DYW
Sbjct: 710 KLYNRDILLRDRYRFHHFSGGNCSCMDYW 738
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 140/285 (49%), Gaps = 34/285 (11%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F DL +SL H Y G L V + +++++W ++I+G Q G E+ L +
Sbjct: 162 FGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFK 221
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M+M RP+++T V V+S+C++ L G+ + + G +++ + ++++ MY +CG
Sbjct: 222 RMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCG 281
Query: 122 CLDDSVKTFLECEYSDVVLWSSM-------------------------------IAAYGF 150
L+D+ + F + E D+V W++M I++Y
Sbjct: 282 SLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQ 341
Query: 151 HGKGEEAINLFEQME-QKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRL 209
+GK +EA+ +F +++ K + N+VT S L AC+ G + G + + +KK K
Sbjct: 342 NGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLG-GWIHVYIKKQGIKLNF 400
Query: 210 EHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
T ++D+ +CG+L++A + ++ + + +W +++ H
Sbjct: 401 HITTSLIDMYSKCGHLEKALEVFYSVE-RRDVFVWSAMIAGLAMH 444
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 135/287 (47%), Gaps = 15/287 (5%)
Query: 27 KVIRLMPIRNVIAWITLIAGKAQNGLA-EDVLDQYNLMRMVGFRPDKITFVSVISSCSEL 85
KV +P N+ W TLI A + + +L ++ P+ TF VI + +E+
Sbjct: 85 KVFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEV 144
Query: 86 ATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMI 145
++L GQ IH V+KA D+ + +SLI YS G LD + F + D+V W+SMI
Sbjct: 145 SSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMI 204
Query: 146 AAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRR 205
+ + G EEA+ LF++M+ + N VT V +L AC+ K +EF R
Sbjct: 205 SGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACA----KRIDLEFGRWACDYIER 260
Query: 206 KP---RLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGR 262
L ++D+ +CG L++A L M K + + W T++ D A R
Sbjct: 261 NGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEK-DIVSWTTMIDGYAKVGDYDAARR 319
Query: 263 IAEEILGVNPQD--AAPYVLLSNIHASAKRWQGVSEFREAMRERNVK 307
+ + V P++ A L+S+ + K + ++ FRE +N K
Sbjct: 320 VFD----VMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTK 362
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 76/159 (47%), Gaps = 2/159 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +L+ +SL MY K G L + +V + R+V W +IAG A +G +D +
Sbjct: 395 GIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLF 454
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSR 119
+ M+ +P+ +TF +++ +CS + +G+ ++ G + ++ + R
Sbjct: 455 SKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVDILGR 514
Query: 120 CGCLDDSVKTFLECE-YSDVVLWSSMIAAYGFHGKGEEA 157
GCL+++V+ + +W +++ A +G E A
Sbjct: 515 AGCLEEAVELIEKMPIVPSASVWGALLGACRIYGNVELA 553
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 321 bits (822), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 162/446 (36%), Positives = 266/446 (59%), Gaps = 25/446 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D V +++ +Y + G + ++ + ++V++W ++I+ NGLA L+ ++ M+
Sbjct: 395 DPVLQNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMK 454
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G PD +T VS++S+ L+TL +G++IH +++ G L+ + ++L+ MY+RCG ++
Sbjct: 455 ETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVE 514
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D+ K F + +++LW++MI+AYG HG GE A+ LF +M+ ++ + +TF++LLYACS
Sbjct: 515 DAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYACS 574
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL +G F ++M +Y+ +P EHYTC+VDLLGR L+EA ++++M + +W
Sbjct: 575 HSGLVNEGKSFLEIMKCEYQLEPWPEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPEVW 634
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
LL AC+ H + ++ AE++L ++ + YVL+SN+ A+ RW+ V E R M+
Sbjct: 635 CALLGACRIHSNKEIGEVAAEKLLELDLDNPGNYVLVSNVFAANGRWKDVEEVRMRMKGS 694
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLR-GYVPDTGADMHD 363
+ K PG SW+E+ N++H F DK HP +I L ++T ++K GYV T +H+
Sbjct: 695 GLTKNPGCSWIEVGNKIHAFLSRDKLHPECDKIYQKLAQVTEKLKREGGYVAQTKFVLHN 754
Query: 364 MDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPFKYISEIKN------------------ 405
+ EEK L HSE+LAIA+ GL+ I KN
Sbjct: 755 VGEEEKVQMLYGHSERLAIAY-----GLLATAEGTPIRVTKNLRVCGDCHSFCTLVSRFF 809
Query: 406 -REIIVRDASRFHHFRNGKCSCGDYW 430
RE+IVRDASRFHHF++G CSCGD+W
Sbjct: 810 ERELIVRDASRFHHFKDGMCSCGDFW 835
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 134/255 (52%), Gaps = 5/255 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ +++ G++L MY K + G + LM +++I+W T AG AQN L+
Sbjct: 291 GFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELL 350
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
++M G D S++ +C L LG+ ++IH ++ G S D + +++I +Y C
Sbjct: 351 RQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLS-DPVLQNTIIDVYGEC 409
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +D +V+ F E DVV W+SMI+ Y +G +A+ +F M++ E + VT VS+L
Sbjct: 410 GIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSIL 469
Query: 181 YACSHCGLKEKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
A +KG E +++K + + + + +VD+ RCG +++A + +
Sbjct: 470 SAVCSLSTLKKGKEIHGFIIRKGFILEGSISN--TLVDMYARCGSVEDAYKIFTCTKNR- 526
Query: 240 NAIIWKTLLSACKTH 254
N I+W ++SA H
Sbjct: 527 NLILWTAMISAYGMH 541
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 140/285 (49%), Gaps = 7/285 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G LD+ ++L MY++ G + E + + ++++ W +++ G QNGL + L+ +
Sbjct: 190 GRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFF 249
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
++ +PD+++ +S+I + L L G++IHA +K G ++ V ++LI MY++C
Sbjct: 250 YDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKC 309
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
C+ + F + D++ W++ A Y + +A+ L Q++ + + + S+L
Sbjct: 310 CCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSIL 369
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC K E ++ P L++ ++D+ G CG +D A + ++ K +
Sbjct: 370 LACRGLNCLGKIKEIHGYTIRGGLSDPVLQN--TIIDVYGECGIIDYAVRIFESIECK-D 426
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAP-YVLLSNI 284
+ W +++S C H +A + E + P YV L +I
Sbjct: 427 VVSWTSMIS-CYVHNG--LANKALEVFSSMKETGLEPDYVTLVSI 468
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 122/239 (51%), Gaps = 7/239 (2%)
Query: 15 MYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKIT 74
MY K GS+++ E + M R++ W ++ G NG A L+ Y MR +G D T
Sbjct: 1 MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
F ++ +C + L G +IH +K G V V++SL+++Y++C ++ + K F
Sbjct: 61 FPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMY 120
Query: 135 Y-SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGM 193
+DVV W+S+I+AY +G EA+ LF +M + N TF + L AC + GM
Sbjct: 121 VRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGM 180
Query: 194 EFFDLMVKKYRRKPRLEHY--TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+ ++K R L+ Y +V + R G + EAA + N+ K + + W ++L+
Sbjct: 181 QIHAAILKSGR---VLDVYVANALVAMYVRFGKMPEAAVIFGNLEGK-DIVTWNSMLTG 235
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 109/214 (50%), Gaps = 2/214 (0%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRN-VIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
+SL +Y K + K+ M +RN V++W ++I+ + NG+ + L ++ M G
Sbjct: 97 NSLVALYAKCNDINGARKLFDRMYVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGV 156
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
+ TF + + +C + + + G QIHA ++K+G LDV V ++L++MY R G + ++
Sbjct: 157 VTNTYTFAAALQACEDSSFIKLGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAV 216
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F E D+V W+SM+ + +G EA+ F ++ + + + V+ +S++ A G
Sbjct: 217 IFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGY 276
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRC 222
G E +K L T ++D+ +C
Sbjct: 277 LLNGKEIHAYAIKNGFDSNILVGNT-LIDMYAKC 309
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 74/158 (46%), Gaps = 4/158 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF L+ ++L MY + GS+ + K+ RN+I W +I+ +G E ++ +
Sbjct: 492 GFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELF 551
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV--ISSLISMYS 118
M+ PD ITF++++ +CS + +G+ E++K L+ + L+ +
Sbjct: 552 MRMKDEKIIPDHITFLALLYACSHSGLVNEGKSF-LEIMKCEYQLEPWPEHYTCLVDLLG 610
Query: 119 RCGCLDDSVKTFLECEYSDVV-LWSSMIAAYGFHGKGE 155
R CL+++ + + +W +++ A H E
Sbjct: 611 RRNCLEEAYQIVKSMQNEPTPEVWCALLGACRIHSNKE 648
>gi|77551591|gb|ABA94388.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
Length = 694
Score = 321 bits (822), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 169/450 (37%), Positives = 256/450 (56%), Gaps = 25/450 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE+D+ +S+ Y K + V M +RN ++W +++A AQNG E+ Y
Sbjct: 250 GFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAY 309
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
R G P S +++C+ L L G+ +HA V++ ++ V S+L+ MY +C
Sbjct: 310 LGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKC 369
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM-EQKEFEANDVTFVSL 179
GC++D+ + F E ++V W++MI Y G + A+ +F+ M E N +T V++
Sbjct: 370 GCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNV 429
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
+ +CS GL + G E F+ M +++ +PR EHY CVVDLLGR G ++A +I+ MP++
Sbjct: 430 ITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRP 489
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
+ +W LL ACK H T++ AE++ ++PQD+ +VLLSN+ ASA RW ++ R+
Sbjct: 490 SISVWGALLGACKMHGKTELGRIAAEKLFELDPQDSGNHVLLSNMFASAGRWAEATDIRK 549
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M+ +KK+PG SW+ KN VH F D H EI L +L +M+ GY+PDT
Sbjct: 550 EMKNVGIKKDPGCSWVTWKNVVHVFRAKDTKHEMYNEIQALLSKLRKQMQAAGYMPDTQY 609
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYI 400
++D++ EEKE + HSEKLA+AF GLI + P FK+I
Sbjct: 610 SLYDLEEEEKESEVFQHSEKLALAF-----GLICIPPGVPIRIMKNLRICVDCHRAFKFI 664
Query: 401 SEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
S I REIIVRD +RFHHF+ +CSCGDYW
Sbjct: 665 SGIVGREIIVRDNNRFHHFKQYQCSCGDYW 694
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 132/295 (44%), Gaps = 10/295 (3%)
Query: 15 MYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKIT 74
MY K+G L + MP RNV+AW ++ +G + ++ Y +R G P+ ++
Sbjct: 163 MYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVS 222
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
+ ++C+ L G+Q H VVK G +DV V++S++ Y +C C + F
Sbjct: 223 ACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMG 282
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGME 194
+ V W SM+AAY +G EEA + + E D S L C+ G
Sbjct: 283 VRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRA 342
Query: 195 FFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
+ V+ + + +VD+ G+CG +++A + P + N + W ++
Sbjct: 343 LHAVAVRSC-IDANIFVASALVDMYGKCGCVEDAEQIFYETPQR-NLVTWNAMIGGYAHI 400
Query: 255 KSTDMAGRIAEEILGVNPQDAAP-YVLLSNIHASAKRWQGVS----EFREAMRER 304
A + +++ + + AP Y+ L N+ S R G++ E E MRER
Sbjct: 401 GDAQNALLVFDDM--IRSGETAPNYITLVNVITSCSR-GGLTKDGYELFETMRER 452
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 98/220 (44%), Gaps = 4/220 (1%)
Query: 33 PIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQ-G 91
P V+++ I+G AQ+G L + M +G RP+ TF S + + G
Sbjct: 78 PHPTVVSYTAFISGAAQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIG 137
Query: 92 QQIHAEVVKAG-ASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGF 150
QIH+ ++ G +D V + + MY + G L + F E +VV W++++
Sbjct: 138 PQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVL 197
Query: 151 HGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLE 210
G+ E I + + + N V+ + AC+ G +F +V K + +
Sbjct: 198 DGRPLETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVV-KCGFEMDVS 256
Query: 211 HYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+VD G+C +A A+ M V+ N++ W ++++A
Sbjct: 257 VLNSMVDFYGKCRCAGKARAVFDGMGVR-NSVSWCSMVAA 295
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 321 bits (822), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 169/444 (38%), Positives = 258/444 (58%), Gaps = 15/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + ++ +SL MY K + + + R +++W +I G AQNG D L+ +
Sbjct: 367 GLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYF 426
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ MR +PD T+VSVI++ +EL+ + IH V+++ +V V ++L+ MY++C
Sbjct: 427 SQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKC 486
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + F V W++MI YG HG G+ A+ LFE+M++ + N VTF+S++
Sbjct: 487 GAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVI 546
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL E G++ F +M + Y + ++HY +VDLLGR G L+EA I MPVK
Sbjct: 547 SACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPA 606
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
++ +L AC+ HK+ + A + AE + +NP D +VLL+NI+ +A W+ V + R +
Sbjct: 607 VNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVS 666
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M + ++K PG S +EIKN+VH F G +HP S +I +LE+L +K GYVPDT
Sbjct: 667 MLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLV 726
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNR 406
+ ++++ KE L HSEKLAI+F T G + + KYIS + R
Sbjct: 727 L-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGR 785
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EI+VRD RFHHF+NG CSCGDYW
Sbjct: 786 EIVVRDMQRFHHFKNGACSCGDYW 809
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 132/248 (53%), Gaps = 2/248 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF LDL A + L +MY K + E KV MP R++++W T++AG +QNG+A L+
Sbjct: 165 GFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMV 224
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M +P IT VSV+ + S L + G++IH +++G V + ++L+ MY++C
Sbjct: 225 KSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKC 284
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L+ + + F +VV W+SMI AY + +EA+ +F++M + + DV+ + L
Sbjct: 285 GSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGAL 344
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
+AC+ G E+G F + + + ++ + +C +D AA++ + +
Sbjct: 345 HACADLGDLERG-RFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSR-T 402
Query: 241 AIIWKTLL 248
+ W ++
Sbjct: 403 LVSWNAMI 410
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 134/267 (50%), Gaps = 2/267 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ + ++L MY K GSL ++ M RNV++W ++I QN ++ + +
Sbjct: 266 GFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIF 325
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G +P ++ + + +C++L L +G+ IH V+ G +V V++SLISMY +C
Sbjct: 326 QKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKC 385
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
+D + F + + +V W++MI + +G+ +A+N F QM + + + T+VS++
Sbjct: 386 KEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVI 445
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
A + + ++++ K + T +VD+ +CG + A LI +M + +
Sbjct: 446 TAIAELSITHHAKWIHGVVMRSCLDK-NVFVTTALVDMYAKCGAI-MIARLIFDMMSERH 503
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEI 267
W ++ TH A + EE+
Sbjct: 504 VTTWNAMIDGYGTHGFGKAALELFEEM 530
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 141/285 (49%), Gaps = 15/285 (5%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+ L ++ + GS+ E +V + + + + T++ G A+ + L + MR
Sbjct: 73 TKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVE 132
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P F ++ C + A L G++IH +VK+G SLD+ ++ L +MY++C ++++ K
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKV 192
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F D+V W++++A Y +G A+ + + M ++ + + +T VS+L A S L
Sbjct: 193 FDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLI 252
Query: 190 EKGMEFFDLMVKKYRRKPRLEHY----TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
G E + Y + + T +VD+ +CG L+ A L M ++ N + W
Sbjct: 253 SVGKE-----IHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGM-LERNVVSWN 306
Query: 246 TLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASA 288
+++ A +++ A I +++L GV P D + ++ +HA A
Sbjct: 307 SMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVS---VMGALHACA 348
>gi|125577630|gb|EAZ18852.1| hypothetical protein OsJ_34389 [Oryza sativa Japonica Group]
Length = 587
Score = 321 bits (822), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 169/450 (37%), Positives = 256/450 (56%), Gaps = 25/450 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE+D+ +S+ Y K + V M +RN ++W +++A AQNG E+ Y
Sbjct: 143 GFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAY 202
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
R G P S +++C+ L L G+ +HA V++ ++ V S+L+ MY +C
Sbjct: 203 LGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKC 262
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM-EQKEFEANDVTFVSL 179
GC++D+ + F E ++V W++MI Y G + A+ +F+ M E N +T V++
Sbjct: 263 GCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNV 322
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
+ +CS GL + G E F+ M +++ +PR EHY CVVDLLGR G ++A +I+ MP++
Sbjct: 323 ITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRP 382
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
+ +W LL ACK H T++ AE++ ++PQD+ +VLLSN+ ASA RW ++ R+
Sbjct: 383 SISVWGALLGACKMHGKTELGRIAAEKLFELDPQDSGNHVLLSNMFASAGRWAEATDIRK 442
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M+ +KK+PG SW+ KN VH F D H EI L +L +M+ GY+PDT
Sbjct: 443 EMKNVGIKKDPGCSWVTWKNVVHVFRAKDTKHEMYNEIQALLSKLRKQMQAAGYMPDTQY 502
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYI 400
++D++ EEKE + HSEKLA+AF GLI + P FK+I
Sbjct: 503 SLYDLEEEEKESEVFQHSEKLALAF-----GLICIPPGVPIRIMKNLRICVDCHRAFKFI 557
Query: 401 SEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
S I REIIVRD +RFHHF+ +CSCGDYW
Sbjct: 558 SGIVGREIIVRDNNRFHHFKQYQCSCGDYW 587
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 132/295 (44%), Gaps = 10/295 (3%)
Query: 15 MYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKIT 74
MY K+G L + MP RNV+AW ++ +G + ++ Y +R G P+ ++
Sbjct: 56 MYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVS 115
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
+ ++C+ L G+Q H VVK G +DV V++S++ Y +C C + F
Sbjct: 116 ACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMG 175
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGME 194
+ V W SM+AAY +G EEA + + E D S L C+ G
Sbjct: 176 VRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRA 235
Query: 195 FFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
+ V+ + + +VD+ G+CG +++A + P + N + W ++
Sbjct: 236 LHAVAVRSC-IDANIFVASALVDMYGKCGCVEDAEQIFYETPQR-NLVTWNAMIGGYAHI 293
Query: 255 KSTDMAGRIAEEILGVNPQDAAP-YVLLSNIHASAKRWQGVS----EFREAMRER 304
A + +++ + + AP Y+ L N+ S R G++ E E MRER
Sbjct: 294 GDAQNALLVFDDM--IRSGETAPNYITLVNVITSCSR-GGLTKDGYELFETMRER 345
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 84/190 (44%), Gaps = 4/190 (2%)
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQ-GQQIHAEVVKAG-ASLDVGVISSLISMYSRC 120
M +G RP+ TF S + + G QIH+ ++ G +D V + + MY +
Sbjct: 1 MLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKT 60
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L + F E +VV W++++ G+ E I + + + N V+ +
Sbjct: 61 GRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACAFF 120
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+ G +F +V K + + +VD G+C +A A+ M V+ N
Sbjct: 121 NACAGAMYLSLGEQFHGFVV-KCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVR-N 178
Query: 241 AIIWKTLLSA 250
++ W ++++A
Sbjct: 179 SVSWCSMVAA 188
>gi|125557011|gb|EAZ02547.1| hypothetical protein OsI_24658 [Oryza sativa Indica Group]
Length = 635
Score = 321 bits (822), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 159/435 (36%), Positives = 253/435 (58%), Gaps = 25/435 (5%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y K G+L + ++ MP ++ I W +I G Q+G + L + M G PD++
Sbjct: 206 YAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAI 265
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAG-ASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
+ +S+ ++L T G+ +H+ V + L+ V ++LI MY +CG L+D+V F
Sbjct: 266 ILALSAVAQLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIG 325
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGME 194
D+V+W++MI Y HG +A+ +F Q+ + D+TF+ LL ACSH GL ++G +
Sbjct: 326 DKDIVVWNAMINGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQ 385
Query: 195 FFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
FF M ++Y P++EHY C+VDLLGR G ++EA L+++M + + ++W +LL+AC+ H
Sbjct: 386 FFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAPDTVMWVSLLAACRLH 445
Query: 255 KSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSW 314
K+ + +IA+ ++ ++ Y+LLSNI+A+ W+ V+ R M+ ++KEPG S
Sbjct: 446 KNMALGQQIADYLVAGGLANSGMYILLSNIYAAVGNWEEVARVRSMMKASGIQKEPGCSA 505
Query: 315 LEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLK 374
+E+ +V++F GD SHPR+ EI LE++ +K +G+VP T +HD+D KE L
Sbjct: 506 IEVGRKVYEFVAGDMSHPRTDEIYAMLEKMNGIVKEQGHVPQTELVLHDLDEVTKEKALA 565
Query: 375 HHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREIIVRDASR 415
HSEKLA+AF GLI P K IS+I R+I+ RD +R
Sbjct: 566 VHSEKLAVAF-----GLISTAPGETIKIVKNLRACADCHAVLKLISKITGRKIVFRDRNR 620
Query: 416 FHHFRNGKCSCGDYW 430
FHHF +G C+CGDYW
Sbjct: 621 FHHFVDGSCTCGDYW 635
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 136/338 (40%), Gaps = 42/338 (12%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + D G L Y S L ++RL P + + + I + GL L
Sbjct: 62 GVDGDRAVGFRLQRAYAASDRLDLTVTLLRLTPDPTTVFYTSAIHAHSSRGLHLAALALL 121
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR- 119
+ M G P T S + +C LA G+ +HA K + D V ++L+ MY+R
Sbjct: 122 SEMLGRGLIPTSHTLSSSLPACHGLAL---GRALHAYAFKLALAGDSYVATALLGMYARG 178
Query: 120 ------------------------------CGCLDDSVKTFLECEYSDVVLWSSMIAAYG 149
G LDD+ + F D + W++MI Y
Sbjct: 179 GDADAARALFDEMPDPHVVPVTAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYT 238
Query: 150 FHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRL 209
HG+ EA+ LF M + + ++V + L A + G E G + R +
Sbjct: 239 QHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNA 298
Query: 210 EHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH----KSTDMAGRIAE 265
T ++D+ +CG L++A ++ ++ K + ++W +++ H K+ +M ++
Sbjct: 299 RVGTALIDMYCKCGSLEDAVSVFNSIGDK-DIVVWNAMINGYAMHGDSRKALEMFSQLRS 357
Query: 266 EILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
+ G+ P D LL+ S +G +F ++M E
Sbjct: 358 Q--GLWPTDITFIGLLNACSHSGLVDEG-HQFFQSMEE 392
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 75/151 (49%), Gaps = 2/151 (1%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
+L+ G++L MY K GSL + V + ++++ W +I G A +G + L+ ++
Sbjct: 295 QLNARVGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEMFSQ 354
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLD-VGVISSLISMYSRCG 121
+R G P ITF+ ++++CS + +G Q + + A + + ++ + R G
Sbjct: 355 LRSQGLWPTDITFIGLLNACSHSGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLGRAG 414
Query: 122 CLDDSVKTFLECEYS-DVVLWSSMIAAYGFH 151
++++ + D V+W S++AA H
Sbjct: 415 LIEEAFHLVQSMTIAPDTVMWVSLLAACRLH 445
>gi|115470299|ref|NP_001058748.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|22831309|dbj|BAC16163.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|24414055|dbj|BAC22304.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113610284|dbj|BAF20662.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|125598898|gb|EAZ38474.1| hypothetical protein OsJ_22862 [Oryza sativa Japonica Group]
Length = 634
Score = 321 bits (822), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 159/435 (36%), Positives = 253/435 (58%), Gaps = 25/435 (5%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y K G+L + ++ MP ++ I W +I G Q+G + L + M G PD++
Sbjct: 205 YAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAI 264
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAG-ASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
+ +S+ ++L T G+ +H+ V + L+ V ++LI MY +CG L+D+V F
Sbjct: 265 ILALSAVAQLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIG 324
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGME 194
D+V+W++MI Y HG +A+ +F Q+ + D+TF+ LL ACSH GL ++G +
Sbjct: 325 DKDIVVWNAMINGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQ 384
Query: 195 FFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
FF M ++Y P++EHY C+VDLLGR G ++EA L+++M + + ++W +LL+AC+ H
Sbjct: 385 FFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAPDTVMWVSLLAACRLH 444
Query: 255 KSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSW 314
K+ + +IA+ ++ ++ Y+LLSNI+A+ W+ V+ R M+ ++KEPG S
Sbjct: 445 KNMALGQQIADYLVAGGLANSGMYILLSNIYAAVGNWEEVARVRSMMKASGIQKEPGCSA 504
Query: 315 LEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLK 374
+E+ +V++F GD SHPR+ EI LE++ +K +G+VP T +HD+D KE L
Sbjct: 505 IEVGRKVYEFVAGDMSHPRTDEIYAMLEKMNGIVKEQGHVPQTELVLHDLDEVTKEKALA 564
Query: 375 HHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREIIVRDASR 415
HSEKLA+AF GLI P K IS+I R+I+ RD +R
Sbjct: 565 VHSEKLAVAF-----GLISTAPGETIKIVKNLRACADCHAVLKLISKITGRKIVFRDRNR 619
Query: 416 FHHFRNGKCSCGDYW 430
FHHF +G C+CGDYW
Sbjct: 620 FHHFVDGSCTCGDYW 634
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 136/338 (40%), Gaps = 42/338 (12%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + D G L Y S L ++RL P + + + I + GL L
Sbjct: 61 GVDGDRAVGFRLQRAYAASDRLDLTVTLLRLTPDPTTVFYTSAIHAHSSRGLHLAALALL 120
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR- 119
+ M G P T S + +C LA G+ +HA K + D V ++L+ MY+R
Sbjct: 121 SEMLGRGLIPTSHTLSSSLPACHGLAL---GRALHAYAFKLALAGDSYVATALLGMYARG 177
Query: 120 ------------------------------CGCLDDSVKTFLECEYSDVVLWSSMIAAYG 149
G LDD+ + F D + W++MI Y
Sbjct: 178 GDADAARALFDEMPDPHVVPVTAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYT 237
Query: 150 FHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRL 209
HG+ EA+ LF M + + ++V + L A + G E G + R +
Sbjct: 238 QHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNA 297
Query: 210 EHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH----KSTDMAGRIAE 265
T ++D+ +CG L++A ++ ++ K + ++W +++ H K+ +M ++
Sbjct: 298 RVGTALIDMYCKCGSLEDAVSVFNSIGDK-DIVVWNAMINGYAMHGDSRKALEMFSQLRS 356
Query: 266 EILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
+ G+ P D LL+ S +G +F ++M E
Sbjct: 357 Q--GLWPTDITFIGLLNACSHSGLVDEG-HQFFQSMEE 391
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 75/151 (49%), Gaps = 2/151 (1%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
+L+ G++L MY K GSL + V + ++++ W +I G A +G + L+ ++
Sbjct: 294 QLNARVGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEMFSQ 353
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLD-VGVISSLISMYSRCG 121
+R G P ITF+ ++++CS + +G Q + + A + + ++ + R G
Sbjct: 354 LRSQGLWPTDITFIGLLNACSHSGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLGRAG 413
Query: 122 CLDDSVKTFLECEYS-DVVLWSSMIAAYGFH 151
++++ + D V+W S++AA H
Sbjct: 414 LIEEAFHLVQSMTIAPDTVMWVSLLAACRLH 444
>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 321 bits (822), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 162/419 (38%), Positives = 247/419 (58%), Gaps = 28/419 (6%)
Query: 32 MPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQG 91
M R+ I+W +I G Q G + L+ ++ M+ RP K SV+S+C+ L L QG
Sbjct: 263 MKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQG 322
Query: 92 QQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFH 151
+ IH + LD + +SL+ MY++CG +D + + F + +V W++MI H
Sbjct: 323 RWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMH 382
Query: 152 GKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEH 211
G+ E+AI+LF +M+ N++TFV +L AC+H GL +KG+ F+ M K+Y +P++EH
Sbjct: 383 GRAEDAIDLFSKMD---IYPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEH 439
Query: 212 YTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVN 271
Y C+VDLLGR G L EA ++ ++P + +W LL AC+ H + ++ R+ + +L +
Sbjct: 440 YGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELE 499
Query: 272 PQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEI-KNQVHQFTMGDKS 330
PQ++ Y LLSNI+A A RW+ V E R+ M+ER +K PG S +++ + +VH+F +GD S
Sbjct: 500 PQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGS 559
Query: 331 HPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRG 390
HP+ +I L+++ +++ GY PD + D+D EEKE + HSEKLAI F G
Sbjct: 560 HPQVKDIYQMLDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVWQHSEKLAIGF-----G 614
Query: 391 LIVMLP-------------------FKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
LI P K IS++ NREIIVRD R+HHFRNG CSC D+W
Sbjct: 615 LINTSPGTTIRIVKNLRVCEDCHSATKLISQVYNREIIVRDRIRYHHFRNGACSCKDFW 673
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 108/228 (47%), Gaps = 14/228 (6%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
NV W +I +N + Y M + RP+K T+ +V+ +CS+ + +G Q+H
Sbjct: 102 NVFLWNCMIKVCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVH 161
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLE-CEYSDVVLWSSMIAAYGFHGKG 154
A +VK G D ++SS I MY+ G L ++ + + D V W++MI Y G+
Sbjct: 162 AHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEV 221
Query: 155 EEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLE-HYT 213
E A LFE M + + T+ +++ S CG+ E EFFD M K R E ++
Sbjct: 222 EAARELFEGMPDRSMIS---TWNAMISGFSRCGMVEVAREFFDEM------KERDEISWS 272
Query: 214 CVVDLLGRCGYLDEAAALIRNM---PVKANAIIWKTLLSACKTHKSTD 258
++D + G EA + M ++ + ++LSAC + D
Sbjct: 273 AMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALD 320
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 90/187 (48%), Gaps = 12/187 (6%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
+LD V G+SL MY K G + +V M + V +W +I G A +G AED +D ++
Sbjct: 334 IQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFS 393
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSRC 120
M + P++ITFV V+++C+ + +G I + K G + ++ + R
Sbjct: 394 KMDIY---PNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRA 450
Query: 121 GCLDDSVKTF--LECEYSDVVLWSSMIAAYGFHGK---GEEAINLFEQMEQKEFEANDVT 175
G L ++ K + E + V W +++ A HG GE + ++E + + T
Sbjct: 451 GLLTEAEKVVSSIPTEPTPAV-WGALLGACRKHGNVELGERVGKILLELEPQ--NSGRYT 507
Query: 176 FVSLLYA 182
+S +YA
Sbjct: 508 LLSNIYA 514
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 75/154 (48%), Gaps = 10/154 (6%)
Query: 111 SSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFE 170
+++IS +SRCG ++ + + F E + D + WS+MI Y G EA+ +F QM++++
Sbjct: 241 NAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIR 300
Query: 171 ANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLE----HYTCVVDLLGRCGYLD 226
S+L AC++ G ++G + Y ++ ++ T +VD+ +CG +D
Sbjct: 301 PRKFVLPSVLSACANLGALDQGR-----WIHTYAKRNSIQLDGVLGTSLVDMYAKCGRID 355
Query: 227 EAAALIRNMPVKANAIIWKTLLSACKTHKSTDMA 260
A + M K + W ++ H + A
Sbjct: 356 LAWEVFEKMSNKEVS-SWNAMIGGLAMHGRAEDA 388
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 73/164 (44%), Gaps = 6/164 (3%)
Query: 92 QQIHAEVVKAGASLDVGVISSLISMYS-----RCGCLDDSVKTFLECEYSDVVLWSSMIA 146
+Q HA +++ G D + SL+ Y+ R + S++ F +V LW+ MI
Sbjct: 52 KQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIK 111
Query: 147 AYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRK 206
+ + +AI L+ +M N T+ ++L ACS G+ +G++ +V K+
Sbjct: 112 VCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLV-KHGLG 170
Query: 207 PRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+ + + G L EA ++ + + +A+ W ++
Sbjct: 171 GDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDG 214
>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 320 bits (821), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 166/445 (37%), Positives = 256/445 (57%), Gaps = 24/445 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D V+ +S+ Y K G + ++ MP RN+I+W ++I+G G ++ L+ ++ M+
Sbjct: 183 DTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQ 242
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G + D + VS + +C++L L QG+ IHA + K +D + LI MY++CG L+
Sbjct: 243 TAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLE 302
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
++++ F + E V +W++MI+ Y HG+G EA+ F +M+ E N +TF +L ACS
Sbjct: 303 EAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACS 362
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL + F+ M + + KP +EHY C+VDLLGR G L EA LI NMPVK NA IW
Sbjct: 363 HAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIW 422
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
LL+AC H + ++ +I + ++ V+P Y+ L++IHA+A W + R M+E+
Sbjct: 423 GALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQ 482
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
V K PG S + + H+F GD+SHP+ EID LE++ ++ GY P G + D+
Sbjct: 483 GVSKLPGCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERLREEGYKPKLGDLLLDL 542
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKN 405
+ +EKE + HHSEKLA+ F GLI P K IS++
Sbjct: 543 EDKEKETAIHHHSEKLAVTF-----GLISTKPGMTIRIVKNLRVCEDCHTVIKLISKVYA 597
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
REI++RD +RFH F++G C+CGDYW
Sbjct: 598 REILMRDRTRFHLFKDGNCTCGDYW 622
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 130/287 (45%), Gaps = 35/287 (12%)
Query: 1 GFELDLVAGSSLAHMYM--KSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLD 58
G LD + S L SGSL V + N W T+I G + + E+ L
Sbjct: 45 GLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALL 104
Query: 59 QYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
Y+ M + TF ++ +CS ++ L + QQIHA ++K G ++ +SL+++YS
Sbjct: 105 LYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYS 164
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYG-----------FH---------------- 151
+ G + + F + + D V W+SMI Y F+
Sbjct: 165 KSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISG 224
Query: 152 ----GKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKP 207
GK +EA+NLF +M+ + ++V VS L AC+ G+ ++G ++ +KK+ +
Sbjct: 225 CVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQG-KWIHAYIKKHEIEI 283
Query: 208 RLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
++D+ +CG L+EA + R M K + +W ++S H
Sbjct: 284 DPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVS-VWTAMISGYAIH 329
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 72/156 (46%), Gaps = 2/156 (1%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
E+D + G L MY K G L E +V R M + V W +I+G A +G + L+ +
Sbjct: 281 IEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFM 340
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSRC 120
M+ G P+++TF ++++CS + + + + + + G + ++ + R
Sbjct: 341 KMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRA 400
Query: 121 GCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGE 155
G L ++ + + +W +++ A HG E
Sbjct: 401 GLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLE 436
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 82/206 (39%), Gaps = 36/206 (17%)
Query: 78 VISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS--RCGCLDDSVKTFLECEY 135
++ CS + L +QIH +++K G LD S L++ + G L + F
Sbjct: 24 LLQRCSNMEEL---RQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFR 80
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
+ +W++MI Y + EEA+ L+ M N TF LL ACS E+ +
Sbjct: 81 PNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQI 140
Query: 196 FDLMVKK------YRRKPRLEHYT------------------------CVVDLLGRCGYL 225
++K Y L Y+ ++D +CG +
Sbjct: 141 HAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEI 200
Query: 226 DEAAALIRNMPVKANAIIWKTLLSAC 251
+ A + +MP + N I W +++S C
Sbjct: 201 EMAYEIFNHMPER-NIISWTSMISGC 225
>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 320 bits (821), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 166/445 (37%), Positives = 256/445 (57%), Gaps = 24/445 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D V+ +S+ Y K G + ++ MP RN+I+W ++I+G G ++ L+ ++ M+
Sbjct: 183 DTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQ 242
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G + D + VS + +C++L L QG+ IHA + K +D + LI MY++CG L+
Sbjct: 243 TAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLE 302
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
++++ F + E V +W++MI+ Y HG+G EA+ F +M+ E N +TF +L ACS
Sbjct: 303 EAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACS 362
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL + F+ M + + KP +EHY C+VDLLGR G L EA LI NMPVK NA IW
Sbjct: 363 HAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIW 422
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
LL+AC H + ++ +I + ++ V+P Y+ L++IHA+A W + R M+E+
Sbjct: 423 GALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQ 482
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
V K PG S + + H+F GD+SHP+ EID LE++ ++ GY P G + D+
Sbjct: 483 GVSKLPGCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERLREEGYKPKLGDLLLDL 542
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKN 405
+ +EKE + HHSEKLA+ F GLI P K IS++
Sbjct: 543 EDKEKETAIHHHSEKLAVTF-----GLISTKPGMTIRIVKNLRVCEDCHTVIKLISKVYA 597
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
REI++RD +RFH F++G C+CGDYW
Sbjct: 598 REILMRDRTRFHLFKDGNCTCGDYW 622
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 129/287 (44%), Gaps = 35/287 (12%)
Query: 1 GFELDLVAGSSLAHMYM--KSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLD 58
G LD + S L SGSL V + N W T+I G + + E+ L
Sbjct: 45 GLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALL 104
Query: 59 QYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
Y+ M + TF ++ +CS ++ + QQIHA ++K G ++ +SL+++YS
Sbjct: 105 LYHHMLYHSVPHNAYTFPFLLKACSSMSASEETQQIHAHIIKMGFGSEIYTTNSLLNVYS 164
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYG-----------FH---------------- 151
+ G + + F + + D V W+SMI Y F+
Sbjct: 165 KSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISG 224
Query: 152 ----GKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKP 207
GK +EA+NLF +M+ + ++V VS L AC+ G+ ++G ++ +KK+ +
Sbjct: 225 CVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQG-KWIHAYIKKHEIEI 283
Query: 208 RLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
++D+ +CG L+EA + R M K + +W ++S H
Sbjct: 284 DPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVS-VWTAMISGYAIH 329
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 72/156 (46%), Gaps = 2/156 (1%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
E+D + G L MY K G L E +V R M + V W +I+G A +G + L+ +
Sbjct: 281 IEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFM 340
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSRC 120
M+ G P+++TF ++++CS + + + + + + G + ++ + R
Sbjct: 341 KMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRA 400
Query: 121 GCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGE 155
G L ++ + + +W +++ A HG E
Sbjct: 401 GLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLE 436
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 82/206 (39%), Gaps = 36/206 (17%)
Query: 78 VISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS--RCGCLDDSVKTFLECEY 135
++ CS + L +QIH +++K G LD S L++ + G L + F
Sbjct: 24 LLQRCSNMEEL---RQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFR 80
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
+ +W++MI Y + EEA+ L+ M N TF LL ACS E+ +
Sbjct: 81 PNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEETQQI 140
Query: 196 FDLMVKK------YRRKPRLEHYT------------------------CVVDLLGRCGYL 225
++K Y L Y+ ++D +CG +
Sbjct: 141 HAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEI 200
Query: 226 DEAAALIRNMPVKANAIIWKTLLSAC 251
+ A + +MP + N I W +++S C
Sbjct: 201 EMAYEIFNHMPER-NIISWTSMISGC 225
>gi|326519957|dbj|BAK03903.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 598
Score = 320 bits (821), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 160/436 (36%), Positives = 253/436 (58%), Gaps = 15/436 (3%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L + ++G + + + MP RN ++W ++ G Q G + L ++ M+ G R
Sbjct: 163 NTLITAHARAGRVADARSLFDEMPERNAVSWSAMVNGYVQAGDGREALGVFSQMQAQGVR 222
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
PD V V+++C++L L QG+ +H + + V + ++L+ MY++CG + ++
Sbjct: 223 PDDTVLVGVLAACAQLGALEQGKWVHGYLKANNIRMTVFLGTALVDMYAKCGEVQLGMEV 282
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F + +V+ W++MI HG+G +++ LF QME + +D+ F+ L AC+H GL
Sbjct: 283 FEGMKDKNVLAWTTMIKGLAMHGRGSDSLTLFSQMESSGVKPDDIAFIGALCACTHTGLV 342
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
+KG E F+ MV Y KP++EHY C+VDLL R G L EA ++ MP+K +A+IW L++
Sbjct: 343 DKGRELFNSMVNNYGIKPKIEHYGCMVDLLARNGLLSEARDMVEKMPMKPDALIWGALMA 402
Query: 250 ACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKE 309
C+ HK+ ++A + + + + P + YVLL NI++++ R E R MRE+ V+K
Sbjct: 403 GCRFHKNVELAEYVIKHWIELEPDKSGAYVLLGNIYSASGRHASAREIRNLMREKGVEKT 462
Query: 310 PGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKL-RGYVPDTGADMHDMDSEE 368
PG S +EIK +HQF +GD SHPR +I E+ S ++L GYVPD + D++ EE
Sbjct: 463 PGCSNVEIKGVIHQFIVGDLSHPRIKDILTKWYEIDSRIRLEEGYVPDKKEVLLDIEEEE 522
Query: 369 KEYNLKHHSEKLAIAFA----EHTRGLIVMLPF----------KYISEIKNREIIVRDAS 414
E L HSEKLAIAFA E + ++ K IS++ REIIVRD +
Sbjct: 523 MESALSRHSEKLAIAFALISTEDYMPIRIVKNLRVCQDCHHVTKLISKVYGREIIVRDRT 582
Query: 415 RFHHFRNGKCSCGDYW 430
RFH F++G CSC DYW
Sbjct: 583 RFHLFKDGTCSCKDYW 598
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 88/181 (48%), Gaps = 4/181 (2%)
Query: 98 VVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEA 157
+++ A++D ++LI+ ++R G + D+ F E + V WS+M+ Y G G EA
Sbjct: 150 LLRTSAAVDASTFNTLITAHARAGRVADARSLFDEMPERNAVSWSAMVNGYVQAGDGREA 209
Query: 158 INLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVD 217
+ +F QM+ + +D V +L AC+ G E+G ++ +K + + T +VD
Sbjct: 210 LGVFSQMQAQGVRPDDTVLVGVLAACAQLGALEQG-KWVHGYLKANNIRMTVFLGTALVD 268
Query: 218 LLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH-KSTDMAGRIAE-EILGVNPQDA 275
+ +CG + + M K N + W T++ H + +D ++ E GV P D
Sbjct: 269 MYAKCGEVQLGMEVFEGMKDK-NVLAWTTMIKGLAMHGRGSDSLTLFSQMESSGVKPDDI 327
Query: 276 A 276
A
Sbjct: 328 A 328
>gi|356570490|ref|XP_003553418.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Glycine max]
Length = 582
Score = 320 bits (821), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 174/447 (38%), Positives = 254/447 (56%), Gaps = 27/447 (6%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN--L 62
D+ GSSL Y K G + KV MP +NV++W +I G +Q GL E+ L+ + L
Sbjct: 142 DVFVGSSLVDTYAKCGDVNLARKVFDEMPHKNVVSWSGMIYGYSQMGLDEEALNLFKRAL 201
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
+ R + T SV+ CS G+Q+H K V SSLIS+YS+CG
Sbjct: 202 EQDYDIRVNDFTLSSVLRVCSASTLFELGKQVHGLCFKTSFDSSCFVASSLISLYSKCGV 261
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
++ K F E + ++ +W++M+ A H LFE+ME+ + N +TF+ LLYA
Sbjct: 262 VEGGYKVFEEVKVRNLGMWNAMLIACAQHAHTGRTFELFEEMERVGVKPNFITFLCLLYA 321
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
CSH GL EKG F LM K++ +P +HY +VDLLGR G L+EA +I+ MP++
Sbjct: 322 CSHAGLVEKGEHCFGLM-KEHGIEPGSQHYATLVDLLGRAGKLEEAVLVIKEMPMQPTES 380
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMR 302
+W LL+ C+ H +T++A +A+++ + + VLLSN +A+A RW+ + R+ MR
Sbjct: 381 VWGALLTGCRIHGNTELASFVADKVFEMGAVSSGIQVLLSNAYAAAGRWEEAARARKMMR 440
Query: 303 ERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMH 362
++ +KKE G+SW+E N+VH F GD+SH ++ EI LEEL EM GYV DT +
Sbjct: 441 DQGIKKETGLSWVEEGNRVHTFAAGDRSHGKTREIYEKLEELGEEMAKAGYVADTSFVLK 500
Query: 363 DMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEI 403
++D +EK +++HSE+LAIAF GLI P K+IS+
Sbjct: 501 EVDGDEKSQTIRYHSERLAIAF-----GLITFPPEWPIRVMKNLRVCGDCHTAIKFISKC 555
Query: 404 KNREIIVRDASRFHHFRNGKCSCGDYW 430
R IIVRD +RFH F +GKC+CGDYW
Sbjct: 556 TGRVIIVRDNNRFHRFEDGKCTCGDYW 582
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 128/277 (46%), Gaps = 6/277 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE + L + Y K+ K+ P ++ W ++I+ AQN L L +
Sbjct: 37 GFEAIPLVCHHLINFYSKTNLPHSSLKLFDSFPHKSATTWSSVISSFAQNDLPLPALRFF 96
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G PD T + S + L++L +HA +K DV V SSL+ Y++C
Sbjct: 97 RRMLRHGLLPDDHTLPTAAKSVAALSSLPLALSLHALSLKTAHHHDVFVGSSLVDTYAKC 156
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFE--ANDVTFVS 178
G ++ + K F E + +VV WS MI Y G EEA+NLF++ +++++ ND T S
Sbjct: 157 GDVNLARKVFDEMPHKNVVSWSGMIYGYSQMGLDEEALNLFKRALEQDYDIRVNDFTLSS 216
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+L CS L E G + L K + ++ L +CG ++ + + V+
Sbjct: 217 VLRVCSASTLFELGKQVHGLCFKTSFDSSCFV-ASSLISLYSKCGVVEGGYKVFEEVKVR 275
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQ 273
N +W +L AC H T + EE+ +GV P
Sbjct: 276 -NLGMWNAMLIACAQHAHTGRTFELFEEMERVGVKPN 311
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 1/157 (0%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F+ SSL +Y K G + G KV + +RN+ W ++ AQ+ + +
Sbjct: 242 FDSSCFVASSLISLYSKCGVVEGGYKVFEEVKVRNLGMWNAMLIACAQHAHTGRTFELFE 301
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M VG +P+ ITF+ ++ +CS + +G+ + + G ++L+ + R G
Sbjct: 302 EMERVGVKPNFITFLCLLYACSHAGLVEKGEHCFGLMKEHGIEPGSQHYATLVDLLGRAG 361
Query: 122 CLDDSVKTFLECEYSDV-VLWSSMIAAYGFHGKGEEA 157
L+++V E +W +++ HG E A
Sbjct: 362 KLEEAVLVIKEMPMQPTESVWGALLTGCRIHGNTELA 398
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 68/162 (41%), Gaps = 2/162 (1%)
Query: 87 TLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIA 146
+L +G Q+H +V+K G V LI+ YS+ S+K F + WSS+I+
Sbjct: 22 SLRKGLQLHGQVIKLGFEAIPLVCHHLINFYSKTNLPHSSLKLFDSFPHKSATTWSSVIS 81
Query: 147 AYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRK 206
++ + A+ F +M + +D T + + + + L +K
Sbjct: 82 SFAQNDLPLPALRFFRRMLRHGLLPDDHTLPTAAKSVAALSSLPLALSLHALSLKTAHHH 141
Query: 207 PRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
+ +VD +CG ++ A + MP K N + W ++
Sbjct: 142 DVFVG-SSLVDTYAKCGDVNLARKVFDEMPHK-NVVSWSGMI 181
>gi|356502497|ref|XP_003520055.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 852
Score = 320 bits (821), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 161/449 (35%), Positives = 247/449 (55%), Gaps = 59/449 (13%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE + ++L MY K+ L V M ++VI+W +L+ G QNG E+ L +
Sbjct: 444 GFENYKLVSNALVDMYAKTEDLNCAYAVFEKMFEKDVISWTSLVTGYTQNGSHEESLKTF 503
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
MR+ G PD+ S++S+C+EL L G+Q+H++ +K G + V +SL++MY++C
Sbjct: 504 CDMRISGVSPDQFIVASILSACAELTLLEFGKQVHSDFIKLGLRSSLSVNNSLVTMYAKC 563
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
GCLDD+ F+ DV+ W+++I Y +GKG +++ F+QM+
Sbjct: 564 GCLDDADAIFVSMHVRDVITWTALIVGYARNGKGRDSLKYFQQMK--------------- 608
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
K Y +P EHY C++DL GR G LDEA ++ M VK +
Sbjct: 609 --------------------KIYGIEPGPEHYACMIDLFGRLGKLDEAKEILNQMDVKPD 648
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A +WK LL+AC+ H + ++ R A + + P +A PYV+LSN++ +A++W ++ R
Sbjct: 649 ATVWKALLAACRVHGNLELGERAATNLFELEPMNAMPYVMLSNMYLAARKWDDAAKIRRL 708
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+ + + KEPG SW+E+ +++H F D+ HPR EI ++E+ +K GYVPD
Sbjct: 709 MKSKGITKEPGCSWIEMNSRLHTFISEDRGHPREAEIYSKIDEIIRRIKEVGYVPDMNFS 768
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
+HDMD E KE L +HSEKLA+AF GL+ P KYIS
Sbjct: 769 LHDMDREGKEAGLAYHSEKLAVAF-----GLLASPPGAPIRIFKNLRVCGDCHSAMKYIS 823
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+ R II+RD++ FHHF+ G+CSC DYW
Sbjct: 824 GVFTRHIILRDSNCFHHFKEGECSCEDYW 852
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 125/261 (47%), Gaps = 24/261 (9%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIR--NVIAWITLIAGKAQNGLAEDVLD 58
GFE ++ + L MY K + E E + + + N + W ++ G AQNG ++
Sbjct: 242 GFESNVYVVAGLVDMYAKCRHISEAEILFKGLAFNKGNHVLWTAMVTGYAQNGDDHKAIE 301
Query: 59 QYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
+ M G ++ TF S++++CS ++ G+Q+H +V+ G + V S+L+ MY+
Sbjct: 302 FFRYMHTEGVESNQFTFPSILTACSSVSAHCFGEQVHGCIVRNGFGCNAYVQSALVDMYA 361
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+CG L + + E DVV W+SMI HG EEAI LF++M + + + TF S
Sbjct: 362 KCGDLGSAKRVLENMEDDDVVSWNSMIVGCVRHGFEEEAILLFKKMHARNMKIDHYTFPS 421
Query: 179 LLYAC---------SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAA 229
+L C HC + + G E + L+ +VD+ + L+ A
Sbjct: 422 VLNCCIVGRIDGKSVHCLVIKTGFENYKLVS------------NALVDMYAKTEDLNCAY 469
Query: 230 ALIRNMPVKANAIIWKTLLSA 250
A+ M + + I W +L++
Sbjct: 470 AVFEKM-FEKDVISWTSLVTG 489
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 123/248 (49%), Gaps = 6/248 (2%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+++ Y G LVE ++ R+ I W +LI+G + G + D + MR+ G +
Sbjct: 150 NTMVSGYANVGRLVEARELFNGFSSRSSITWSSLISGYCRFGRQAEAFDLFKRMRLEGQK 209
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P + T S++ CS L + +G+ IH VVK G +V V++ L+ MY++C + ++
Sbjct: 210 PSQYTLGSILRGCSALGLIQKGEMIHGYVVKNGFESNVYVVAGLVDMYAKCRHISEAEIL 269
Query: 130 F--LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCG 187
F L + VLW++M+ Y +G +AI F M + E+N TF S+L ACS
Sbjct: 270 FKGLAFNKGNHVLWTAMVTGYAQNGDDHKAIEFFRYMHTEGVESNQFTFPSILTACSSVS 329
Query: 188 LKEKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKT 246
G + +V+ + ++ + +VD+ +CG L A ++ NM + + W +
Sbjct: 330 AHCFGEQVHGCIVRNGFGCNAYVQ--SALVDMYAKCGDLGSAKRVLENME-DDDVVSWNS 386
Query: 247 LLSACKTH 254
++ C H
Sbjct: 387 MIVGCVRH 394
>gi|302820798|ref|XP_002992065.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
gi|300140187|gb|EFJ06914.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
Length = 771
Score = 320 bits (821), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 177/448 (39%), Positives = 260/448 (58%), Gaps = 29/448 (6%)
Query: 7 VAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV 66
V +L ++Y K G + + +V+ MP+R ++W +IA AQNG A + ++ + M +
Sbjct: 329 VVAGTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLE 388
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGA-SLDVGVISSLISMYSRCGCLDD 125
G P IT +SV+ SC+ L TL G++IHA + + S + +++++I+MY +CG L+
Sbjct: 389 GAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPLFSQSLMLLNAVITMYGKCGNLEL 448
Query: 126 SVKTF--LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQME-QKEFEANDVTFVSLLYA 182
+ + F + VV W++MI AY +G GEEAI LF++M E N VTF+S+L A
Sbjct: 449 AREVFESVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEMVIDGGTEPNRVTFLSVLSA 508
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALI-RNMPVKANA 241
CSH G E+ E F M + P +HY C+VDLLGR G L EA L+ R+ +A+
Sbjct: 509 CSHLGQLEQAWEHFCSMGPDFGVPPAGDHYCCLVDLLGRAGRLGEAEKLLLRHKDFEADV 568
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
+ W LSAC+ + + + R A+ + + P++ A VLLSN++A+ R V+ R M
Sbjct: 569 VCWIAFLSACQMNGDLERSQRAAKRVSELEPENVAGRVLLSNVYAAKGRRADVARIRNEM 628
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
+ VKK G SW+EI N+VH+F + D SHPR +EI LE L E+K GYVPDT +
Sbjct: 629 KSSGVKKFAGRSWIEINNRVHEFMVSDVSHPRKLEIYSELERLHREIKEAGYVPDTKMVL 688
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISE 402
D+D E+K L +HSE+LA+A G+I P K+IS+
Sbjct: 689 RDVDEEKKAQLLGYHSERLAMAL-----GIISTPPGTTLRVVKNLRVCSDCHAATKFISQ 743
Query: 403 IKNREIIVRDASRFHHFRNGKCSCGDYW 430
I R+IIVRD SRFHHF++G CSCGDYW
Sbjct: 744 IVGRQIIVRDTSRFHHFKDGVCSCGDYW 771
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 91/180 (50%), Gaps = 16/180 (8%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPI--RNVIAWITLIAGKAQNGLAEDVLDQ 59
F L+ +++ MY K G+L +V +P+ R+V+ W +I AQNG+ E+ ++
Sbjct: 426 FSQSLMLLNAVITMYGKCGNLELAREVFESVPLRTRSVVTWTAMIRAYAQNGVGEEAIEL 485
Query: 60 YNLMRM-VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISS------ 112
+ M + G P+++TF+SV+S+CS LGQ +Q G D GV +
Sbjct: 486 FQEMVIDGGTEPNRVTFLSVLSACSH---LGQLEQAWEHFCSMGP--DFGVPPAGDHYCC 540
Query: 113 LISMYSRCGCLDDSVKTFLECE--YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFE 170
L+ + R G L ++ K L + +DVV W + ++A +G E + +++ + E E
Sbjct: 541 LVDLLGRAGRLGEAEKLLLRHKDFEADVVCWIAFLSACQMNGDLERSQRAAKRVSELEPE 600
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 107/245 (43%), Gaps = 39/245 (15%)
Query: 35 RNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQI 94
R+V++W L+AG A++ E+ + M + D +T SV+ + L + Q++
Sbjct: 134 RDVVSWAILVAGYARHDRLEEASALFRRMPLW----DTVTCTSVLQGYAHNGHLAEAQEL 189
Query: 95 HAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKG 154
+ AG D +++I+ Y + +D + F + + + WS ++ Y +G
Sbjct: 190 FDRIGGAG-DRDATACNAMIAAYGKNARVDLAEGLFAQIKLRNAASWSLLLLTYAQNGHL 248
Query: 155 EEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF-----------FDLMVKKY 203
+ A F++M Q++ + F ++ S G E ++ +++ Y
Sbjct: 249 DLAKKSFDRMPQRD----SIAFTAMTAVLSDQGELRGAREMLRYLSAVDVIAWNALLEGY 304
Query: 204 RRKPRL----------EHYT--------CVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
R L EH T +V+L G+CG +D+A ++ MPV+ ++ W
Sbjct: 305 SRTGDLDEVRRLFSAMEHRTVATTVVAGTLVNLYGKCGRVDDARRVLDAMPVR-TSVSWT 363
Query: 246 TLLSA 250
+++A
Sbjct: 364 AMIAA 368
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 74/173 (42%), Gaps = 14/173 (8%)
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
F I +C+ L + + +H E+ ++ + + + LI ++ +CG D + F
Sbjct: 10 FEERIRACAIGRKLHEAKILHDEIARSPHGDNRRLTNLLIDLFGKCGDPDAARAVFNRVR 69
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGME 194
+ WS +I AY + +A LF+ M F+A T+ ++ A + + E
Sbjct: 70 LPNEYSWSCIIQAYVSSSRIHDARALFDSMPG--FDA--FTWNIMIAAYARINRLDDARE 125
Query: 195 FFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTL 247
F M+ + + +V R L+EA+AL R MP +W T+
Sbjct: 126 LFHGMISGR----DVVSWAILVAGYARHDRLEEASALFRRMP------LWDTV 168
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 320 bits (821), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 167/444 (37%), Positives = 259/444 (58%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G ++++ ++L MY K G + ++ P ++W T+I G Q G E L +
Sbjct: 377 GLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILF 436
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M + ++T+ SV+ +C+ +A L G QIH+ VK + V ++LI MY++C
Sbjct: 437 KDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKC 496
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + D+ F D V W++MI+ Y HG EA+ FE M + E + + VTFV +L
Sbjct: 497 GNIKDARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGIL 556
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACS+ GL ++G +F MV++Y +P EHYTC+V LLGR G+LD+AA L+ +P + +
Sbjct: 557 SACSNAGLLDRGQAYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFEPS 616
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
++W+ LLSAC H ++ A+ +L + P+D A +VLLSNI+A+A+RW V+ R +
Sbjct: 617 VMVWRALLSACVIHNDVELGRISAQRVLEIEPEDEATHVLLSNIYANARRWGNVASIRTS 676
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+ + ++KEPG+SW+E + +VH F++GD SHP + I+ LE L + + GYVPD +
Sbjct: 677 MKRKGIRKEPGLSWIENQGRVHYFSVGDTSHPDTKLINGMLEWLNMKARNEGYVPDFSSV 736
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVML--------------PFKYISEIKNR 406
+ D++ +KE L HSE+LA+A+ I L K IS+I R
Sbjct: 737 LLDVEDVDKEQRLWVHSERLALAYGLIRTPSISPLRIIKNLRICADCHAAIKLISKIVQR 796
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
+II+RD +RFHHF G CSCGDYW
Sbjct: 797 DIIIRDMNRFHHFHEGICSCGDYW 820
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 156/305 (51%), Gaps = 4/305 (1%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
+L G L +Y+KSG + + +V MP +VI W +IA AQ+ +E+ ++ + MR
Sbjct: 280 ELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMR 339
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
P++ T S++ +C+ L L G QIH VVK G ++V V ++L+ MY++CG ++
Sbjct: 340 RGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRME 399
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+S++ F E V W+++I Y G GE+A+ LF+ M + + + +VT+ S+L AC+
Sbjct: 400 NSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACA 459
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
E G + L VK K + ++D+ +CG + + A L+ +M + + + W
Sbjct: 460 GIAALEPGSQIHSLSVKTIYDKNTVVG-NALIDMYAKCGNIKD-ARLVFDMLREHDQVSW 517
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGV--NPQDAAPYVLLSNIHASAKRWQGVSEFREAMR 302
++S H A + E +L P +LS + +G + F+ +
Sbjct: 518 NAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQAYFKSMVE 577
Query: 303 ERNVK 307
E +++
Sbjct: 578 EYDIE 582
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 122/259 (47%), Gaps = 24/259 (9%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ D G++L Y G +V + +++++W ++A +N E+ L +
Sbjct: 175 GFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLF 234
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ MR+VGF+P+ TF SV+ +C L G+ +H K ++ V LI +Y +
Sbjct: 235 SRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKS 294
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +DD+++ F E DV+ WS MIA Y + EEAI +F +M + N T SLL
Sbjct: 295 GDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLL 354
Query: 181 YACS-----------HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAA 229
AC+ HC + + G++ ++ V ++D+ +CG ++ +
Sbjct: 355 QACASLVDLQLGNQIHCHVVKVGLD-MNVFVS-----------NALMDMYAKCGRMENSL 402
Query: 230 ALIRNMPVKANAIIWKTLL 248
L P + W T++
Sbjct: 403 QLFSESP-NCTDVSWNTVI 420
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 123/252 (48%), Gaps = 14/252 (5%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
LDL A + L + Y+K SL + K+ MP RN ++++TLI G +Q + + ++ +
Sbjct: 77 LDLFANNILLNFYVKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRL 136
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
+ G + F +V+ G +HA V K G D V ++LI YS CG
Sbjct: 137 QGEGHELNPFVFSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYA 196
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
+ + + F EY D+V W+ M+A Y + EE++ LF +M F+ N+ TF S+L AC
Sbjct: 197 ECARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKAC 256
Query: 184 SHCGLKEKGMEFFDLMVK----KYRRKPRLEHYTCV--VDLLGRCGYLDEAAALIRNMPV 237
G+E F++ ++ E + V +DL + G +D+A + MP
Sbjct: 257 V-------GLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMP- 308
Query: 238 KANAIIWKTLLS 249
K + I W +++
Sbjct: 309 KDDVIPWSFMIA 320
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 57/113 (50%), Gaps = 2/113 (1%)
Query: 70 PDKITFV--SVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV 127
P+ T++ S++ SC G+ +H E++K G LD+ + L++ Y + L D+
Sbjct: 40 PEFNTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAA 99
Query: 128 KTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
K F E + V + ++I Y + EAI LF +++ + E N F ++L
Sbjct: 100 KLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVL 152
>gi|357467379|ref|XP_003603974.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355493022|gb|AES74225.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 566
Score = 320 bits (821), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 168/451 (37%), Positives = 258/451 (57%), Gaps = 26/451 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF DL ++L HMY + G LV +V M R+V++W ++IAG + L + + +
Sbjct: 121 GFGFDLYIQNALIHMYSEIGELVIARQVFDRMSHRDVVSWTSMIAGFVNHHLTVEAIQLF 180
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M VG ++ T +SV+ C++ L G+++H V + G V ++LI MYS+C
Sbjct: 181 QRMLEVGVDVNEATVISVLRGCADSGALSVGRKVHGIVKEKGIDFKANVCTALIHMYSKC 240
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
GCL+ + + F + DV +W++MI HG +EAI LF +ME + ++ T + +L
Sbjct: 241 GCLESAREVFDDVLDRDVFVWTAMIYGLACHGMCKEAIELFLEMETCNVKPDERTIMVVL 300
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
A + GL +G FF+ + K+Y KP ++H+ C+VDLL + G L+EA I MP+K +
Sbjct: 301 SAYRNAGLVREGYMFFNDVQKRYSMKPNIKHFGCMVDLLAKGGCLEEAEDFINAMPMKPD 360
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAE--EILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
A+IW+TL+ ACK H T+ A R+ + E+ G++ D+ Y+L SN++AS +W +E R
Sbjct: 361 AVIWRTLIWACKVHADTERAERLMKHLELQGMSAHDSGSYILASNVYASTGKWCDKAEVR 420
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
E M ++ + K PG S +E+ VH+F MGD HP + +I + L+++ +++ GY P
Sbjct: 421 ELMNKKGLVKPPGSSRIEVDGVVHEFVMGDYDHPDTEKIFIKLDQMVDKLRKEGYNPKVS 480
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKY 399
M +MD EEK L HHSEKLA+A+ GLI P K
Sbjct: 481 EVMLEMDDEEKAIQLLHHSEKLALAY-----GLIRTCPGSKIRIVKNLRSCEDCHEFMKL 535
Query: 400 ISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
IS++ R+IIVRD RFHHF+NG CSC DYW
Sbjct: 536 ISKVYQRDIIVRDRIRFHHFKNGDCSCKDYW 566
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 113/252 (44%), Gaps = 26/252 (10%)
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
+PD T+ + SC L Q +Q+H + K G D+ + ++LI MYS G L + +
Sbjct: 88 KPDTFTYSFALKSCGRLKLTQQAKQLHGFINKMGFGFDLYIQNALIHMYSEIGELVIARQ 147
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCG- 187
F + DVV W+SMIA + H EAI LF++M + + N+ T +S+L C+ G
Sbjct: 148 VFDRMSHRDVVSWTSMIAGFVNHHLTVEAIQLFQRMLEVGVDVNEATVISVLRGCADSGA 207
Query: 188 ----------LKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
+KEKG++F + T ++ + +CG L+ A + ++ +
Sbjct: 208 LSVGRKVHGIVKEKGIDF------------KANVCTALIHMYSKCGCLESAREVFDDV-L 254
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLSNIHASAKRWQGVS 295
+ +W ++ H A + E+ V P + V+LS + +G
Sbjct: 255 DRDVFVWTAMIYGLACHGMCKEAIELFLEMETCNVKPDERTIMVVLSAYRNAGLVREGYM 314
Query: 296 EFREAMRERNVK 307
F + + ++K
Sbjct: 315 FFNDVQKRYSMK 326
>gi|357141866|ref|XP_003572374.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Brachypodium distachyon]
Length = 642
Score = 320 bits (821), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 173/444 (38%), Positives = 255/444 (57%), Gaps = 16/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + D+ SSL YMK G L G V M +++ W ++IAG AQ+G ++ +
Sbjct: 201 GLDSDVFVRSSLIDAYMKLGDLDSGRGVFDEMVTCDLVVWNSIIAGFAQSGDGVGAMELF 260
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ GF ++ T SV+ +C+ + L G+Q+HA V+K D+ + ++L+ MY +C
Sbjct: 261 MRMKESGFLANQGTLTSVLRACTGMVMLEVGRQVHAHVLKY--DRDLILHNALLDMYCKC 318
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
GCL D+ F DV+ WS+MI+ +G+ EA+ +F+ M+ + N++T V +L
Sbjct: 319 GCLLDADALFSRMHDRDVISWSTMISGLAQNGRSVEALKVFDLMKAEGPTPNNITMVGVL 378
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
+ACSH GL E G +F M K + +P EH C+VDLLGR G LDEA I M + +
Sbjct: 379 FACSHAGLVEDGWHYFRSMDKLFGIQPEREHCNCMVDLLGRAGKLDEAMKFIGEMKFEPD 438
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
++IW+TLL AC+ HK+ +A A EIL + P+D +LLSNI+A ++W + +
Sbjct: 439 SVIWRTLLGACRMHKNATLASYAATEILKLEPEDQGARILLSNIYADLRQWSNAEKSWKT 498
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
MR++ VKKEPG SW+E+ VH F G+ SHP S I L L K GYVP T
Sbjct: 499 MRDQGVKKEPGRSWIELGKLVHVFIAGELSHPCSDRIVQELNRLIRRAKDLGYVPQTEFV 558
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHT----RGLIVMLPF----------KYISEIKNR 406
+ D+ +E+KE LK+HSEKLAIAF + + +M K +S+ + +
Sbjct: 559 LQDLGTEQKEDLLKYHSEKLAIAFGTMNSMEGKPVRIMKNLRICGDCHAFAKLVSKTEGK 618
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
II+RD RFHHF++G CSCGDYW
Sbjct: 619 AIIIRDPVRFHHFQHGVCSCGDYW 642
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/246 (34%), Positives = 126/246 (51%), Gaps = 8/246 (3%)
Query: 6 LVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQ-NGLAEDVLDQYNLMR 64
L +SL MY K G L + ++ MP RNV++W T++A A G ++ L MR
Sbjct: 107 LFVSNSLVSMYAKFGMLDDALELFGGMPQRNVVSWTTVVAALANAPGRKKEALRFLVEMR 166
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G + TF SV+ +C T G +HA+++K G DV V SSLI Y + G LD
Sbjct: 167 RDGVAANSYTFSSVLGAC---GTPGVLAAMHADIIKVGLDSDVFVRSSLIDAYMKLGDLD 223
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
F E D+V+W+S+IA + G G A+ LF +M++ F AN T S+L AC+
Sbjct: 224 SGRGVFDEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSVLRACT 283
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
+ E G + V KY R L + ++D+ +CG L +A AL M + + I W
Sbjct: 284 GMVMLEVGRQVH-AHVLKYDRDLIL--HNALLDMYCKCGCLLDADALFSRMHDR-DVISW 339
Query: 245 KTLLSA 250
T++S
Sbjct: 340 STMISG 345
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 92/199 (46%), Gaps = 28/199 (14%)
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEV------VKAGASLDVGVISSLISMYSRC 120
G R D ++ +I C T+G G+ IH V + V +SL+SMY++
Sbjct: 61 GVRADPVSLCRLIKLCVRHGTVGDGRAIHRHVSLCAHGGGGATHGSLFVSNSLVSMYAKF 120
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYG-FHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G LDD+++ F +VV W++++AA G+ +EA+ +M + AN TF S+
Sbjct: 121 GMLDDALELFGGMPQRNVVSWTTVVAALANAPGRKKEALRFLVEMRRDGVAANSYTFSSV 180
Query: 180 LYACS--------HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAAL 231
L AC H + + G++ D+ V+ + ++D + G LD +
Sbjct: 181 LGACGTPGVLAAMHADIIKVGLD-SDVFVR-----------SSLIDAYMKLGDLDSGRGV 228
Query: 232 IRNMPVKANAIIWKTLLSA 250
M V + ++W ++++
Sbjct: 229 FDEM-VTCDLVVWNSIIAG 246
>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Glycine max]
Length = 1033
Score = 320 bits (820), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 171/416 (41%), Positives = 256/416 (61%), Gaps = 15/416 (3%)
Query: 30 RLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLG 89
R+ R+ ++W +I+G NG+ + LM G R D T +V+S+C+ +ATL
Sbjct: 618 RMSERRDEVSWNAMISGYIHNGILHKAMGLVWLMMQKGQRLDDFTLATVLSACASVATLE 677
Query: 90 QGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYG 149
+G ++HA ++A +V V S+L+ MY++CG +D + + F ++ W+SMI+ Y
Sbjct: 678 RGMEVHACAIRACLEAEVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYA 737
Query: 150 FHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRL 209
HG G +A+ LF QM+Q + VTFV +L ACSH GL ++G E F M + Y PR+
Sbjct: 738 RHGHGGKALKLFTQMKQHGQLPDHVTFVGVLSACSHVGLVDEGFEHFKSMGEVYELAPRI 797
Query: 210 EHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSAC--KTHKSTDMAGRIAEEI 267
EH++C+VDLLGR G + + I+ MP+ NA+IW+T+L AC ++T++ R A+ +
Sbjct: 798 EHFSCMVDLLGRAGDVKKLEEFIKTMPMNPNALIWRTILGACCRANSRNTELGRRAAKML 857
Query: 268 LGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMG 327
+ + P +A YVLLSN+HA+ +W+ V E R AMR VKKE G SW+ +K+ VH F G
Sbjct: 858 IELEPLNAVNYVLLSNMHAAGGKWEDVEEARLAMRNAEVKKEAGCSWVTMKDGVHVFVAG 917
Query: 328 DKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAF--- 384
D++HP +I L+E+ ++M+ GYVP+T ++D++ E KE L +HSEKLAIAF
Sbjct: 918 DQTHPEKEKIYDKLKEIMNKMRDLGYVPETKYALYDLELENKEELLSYHSEKLAIAFVLT 977
Query: 385 --AEHTRGLIVML--------PFKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+E +I L FKYIS I NR+II+RD++RFHHF G CSC DYW
Sbjct: 978 RQSELPIRIIKNLRVCGDCHTAFKYISNIVNRQIILRDSNRFHHFDGGICSCQDYW 1033
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 127/246 (51%), Gaps = 2/246 (0%)
Query: 6 LVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRM 65
++ G++L ++Y K ++ + +LMP ++ ++W ++I+G N E+ + ++ MR
Sbjct: 390 ILIGNALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRR 449
Query: 66 VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD 125
G P K + +S +SSC+ L + GQQIH E +K G LDV V ++L+++Y+ C+++
Sbjct: 450 NGMVPSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEE 509
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGF-HGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
K F D V W+S I A +AI F +M Q ++ N VTF+++L A S
Sbjct: 510 YQKVFFLMPEYDQVSWNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINILSAVS 569
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
L E G + L++K T ++ G+C +++ + M + + + W
Sbjct: 570 SLSLLELGRQIHALILKHSVADDNAIENT-LLAFYGKCEQMEDCEIIFSRMSERRDEVSW 628
Query: 245 KTLLSA 250
++S
Sbjct: 629 NAMISG 634
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 142/291 (48%), Gaps = 13/291 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D+ ++L ++++++G+LV +K+ MP +N+++W L++G AQNG+ ++ +
Sbjct: 69 GLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGYAQNGMPDEACMLF 128
Query: 61 NLMRMVGFRPDKITFVSVISSCSELAT--LGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
+ G P+ S + +C EL L G +IH + K+ + D+ + + L+SMYS
Sbjct: 129 RGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDMVLSNVLMSMYS 188
Query: 119 RCGC-LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFE----AND 173
C +DD+ + F E + W+S+I+ Y G A LF M+++ E N+
Sbjct: 189 HCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQREATELNCRPNE 248
Query: 174 VTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY---TCVVDLLGRCGYLDEAAA 230
TF SL+ C L + G+ + M+ + + ++ + +V R G +D A
Sbjct: 249 YTFCSLVTVA--CSLVDCGLTLLEQMLARIEKSSFVKDLYVGSALVSGFARYGLIDSAKM 306
Query: 231 LIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLL 281
+ M + NA+ L+ + A +I +E+ + +A+ Y +L
Sbjct: 307 IFEQMDDR-NAVTMNGLMVGLARQHQGEEAAKIFKEMKDLVEINASSYAVL 356
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 136/256 (53%), Gaps = 4/256 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +LD+ ++L +Y ++ + E +KV LMP + ++W + I A + + +Y
Sbjct: 486 GLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGALATSEASVLQAIKY 545
Query: 61 NL-MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
L M G++P+++TF++++S+ S L+ L G+QIHA ++K + D + ++L++ Y +
Sbjct: 546 FLEMMQAGWKPNRVTFINILSAVSSLSLLELGRQIHALILKHSVADDNAIENTLLAFYGK 605
Query: 120 CGCLDDSVKTFLE-CEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
C ++D F E D V W++MI+ Y +G +A+ L M QK +D T +
Sbjct: 606 CEQMEDCEIIFSRMSERRDEVSWNAMISGYIHNGILHKAMGLVWLMMQKGQRLDDFTLAT 665
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+L AC+ E+GME ++ + + + +VD+ +CG +D A+ MPV+
Sbjct: 666 VLSACASVATLERGMEVHACAIRAC-LEAEVVVGSALVDMYAKCGKIDYASRFFELMPVR 724
Query: 239 ANAIIWKTLLSACKTH 254
N W +++S H
Sbjct: 725 -NIYSWNSMISGYARH 739
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 53/90 (58%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
E ++V GS+L MY K G + + LMP+RN+ +W ++I+G A++G L +
Sbjct: 691 LEAEVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGGKALKLFT 750
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQG 91
M+ G PD +TFV V+S+CS + + +G
Sbjct: 751 QMKQHGQLPDHVTFVGVLSACSHVGLVDEG 780
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 94/210 (44%), Gaps = 12/210 (5%)
Query: 45 AGKAQNGLAEDVLDQYNLMRM-VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGA 103
A Q L+E +L N + F P + + SC T+ Q+H ++ K G
Sbjct: 15 ARSTQLALSEQLLHHCNSSHHHLHFPPLNLDYNRYRDSC----TVEDAHQLHLQIYKTGL 70
Query: 104 SLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQ 163
+ DV ++L++++ R G L + K F E ++V WS +++ Y +G +EA LF
Sbjct: 71 TSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGYAQNGMPDEACMLFRG 130
Query: 164 MEQKEFEANDVTFVSLLYACSHCG--LKEKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLG 220
+ N S L AC G + + GME L+ K Y L + ++ +
Sbjct: 131 IISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDMVLSNV--LMSMYS 188
Query: 221 RC-GYLDEAAALIRNMPVKANAIIWKTLLS 249
C +D+A + + +K +A W +++S
Sbjct: 189 HCSASIDDARRVFEEIKMKTSA-SWNSIIS 217
>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial; Flags: Precursor
gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 320 bits (820), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 165/445 (37%), Positives = 258/445 (57%), Gaps = 15/445 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+LD+ ++L +Y K + K+ + +N ++W T+I G G +
Sbjct: 378 GFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMF 437
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
++TF S + +C+ LA++ G Q+H +K + V V +SLI MY++C
Sbjct: 438 REALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKC 497
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + F E E DV W+++I+ Y HG G +A+ + + M+ ++ + N +TF+ +L
Sbjct: 498 GDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVL 557
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
CS+ GL ++G E F+ M++ + +P LEHYTC+V LLGR G LD+A LI +P + +
Sbjct: 558 SGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPS 617
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+IW+ +LSA + + A R AEEIL +NP+D A YVL+SN++A AK+W V+ R++
Sbjct: 618 VMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKS 677
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+E VKKEPG+SW+E + VH F++G HP I+ LE L + GYVPD A
Sbjct: 678 MKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAV 737
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA----EHTRGLIVML-----------PFKYISEIKN 405
+ DMD EEK+ L HSE+LA+A+ +R I+++ K IS I
Sbjct: 738 LLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQ 797
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
R++++RD +RFHHF G CSCGD+W
Sbjct: 798 RDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 150/315 (47%), Gaps = 14/315 (4%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
+ LD G L +Y + G + + KV MP +V+ W +IA QNG + +D +
Sbjct: 278 YVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFI 337
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
MR P++ T S+++ C+ G G+Q+H VVK G LD+ V ++LI +Y++C
Sbjct: 338 RMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCE 397
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+D +VK F E + V W+++I Y G+G +A ++F + + + +VTF S L
Sbjct: 398 KMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALG 457
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
AC+ + G++ L +K K ++ ++D+ +CG + A ++ M +
Sbjct: 458 ACASLASMDLGVQVHGLAIKTNNAK-KVAVSNSLIDMYAKCGDIKFAQSVFNEMET-IDV 515
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGV-NPQDAAPYVL-----LSNIHASAKRWQGVS 295
W L+S TH GR A IL + +D P L LS + QG
Sbjct: 516 ASWNALISGYSTHG----LGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQE 571
Query: 296 EFREAMRERNVKKEP 310
F +R+ + EP
Sbjct: 572 CFESMIRDHGI--EP 584
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 122/250 (48%), Gaps = 6/250 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G++ + G++L + Y GS+ V + ++++ W +++ +NG ED L
Sbjct: 176 GYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLL 235
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ MRM GF P+ TF + + + L + +H +++K LD V L+ +Y++
Sbjct: 236 SCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQL 295
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + D+ K F E +DVV WS MIA + +G EA++LF +M + N+ T S+L
Sbjct: 296 GDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSIL 355
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY--TCVVDLLGRCGYLDEAAALIRNMPVK 238
C+ G + L+VK L+ Y ++D+ +C +D A L + K
Sbjct: 356 NGCAIGKCSGLGEQLHGLVVKV---GFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSK 412
Query: 239 ANAIIWKTLL 248
N + W T++
Sbjct: 413 -NEVSWNTVI 421
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 114/250 (45%), Gaps = 8/250 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G LDL A + L + Y+K+G + + MP RN ++++TL G A +D + Y
Sbjct: 79 GSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA----CQDPIGLY 134
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ + G + F S + L +H+ +VK G + V ++LI+ YS C
Sbjct: 135 SRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVC 194
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +D + F D+V+W+ +++ Y +G E+++ L M F N+ TF + L
Sbjct: 195 GSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTAL 254
Query: 181 YACSHCGLKEKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
A G + ++K Y PR+ ++ L + G + +A + MP K
Sbjct: 255 KASIGLGAFDFAKGVHGQILKTCYVLDPRVG--VGLLQLYTQLGDMSDAFKVFNEMP-KN 311
Query: 240 NAIIWKTLLS 249
+ + W +++
Sbjct: 312 DVVPWSFMIA 321
>gi|357140731|ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 695
Score = 320 bits (820), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 170/445 (38%), Positives = 255/445 (57%), Gaps = 15/445 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRL-MPIRNVIAWITLIAGKAQNGLAEDVLDQ 59
GFE ++ ++L MY K+ + +V+++ NV++ +LI G + E L
Sbjct: 251 GFEQEVAVRNALTDMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYIETDCIEKALLM 310
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ +R G P++ TF S+I C+ A L QG Q+HAEV+K D V S+L+ MY +
Sbjct: 311 FIELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGK 370
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG + S++ F E EY + W++ I HG G EAI F++M N +TFVSL
Sbjct: 371 CGLISLSIQLFKEIEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSL 430
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L ACSH GL ++G+++F M + +P+ EHY+C++D+ GR G LDEA I MPVK
Sbjct: 431 LTACSHAGLVDEGLKYFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMPVKP 490
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
NA W +LL AC+ + ++ A+ ++ + P + +V LS I+AS +W+ V R+
Sbjct: 491 NAYGWCSLLGACRMRGNKELGEIAADNMMKLEPDNTGVHVSLSGIYASLGQWEDVKAVRK 550
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
MR+ +KK PG SW++ + H F D SHP+ +I LEEL +K GYVPDT
Sbjct: 551 LMRDNRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQEKIYEKLEELYERIKEEGYVPDTRF 610
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFA----EHTRGLIVM----------LPFKYISEIKN 405
+++ K+ L++HSE++A+AFA T+ +IV K+IS+++N
Sbjct: 611 LPCNLEDTAKQRILRYHSERIAVAFALISMPATKPIIVKKNLRICADCHSALKFISKVEN 670
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
R+IIVRD SRFHHF G CSCGDYW
Sbjct: 671 RDIIVRDNSRFHHFVKGGCSCGDYW 695
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 76/162 (46%)
Query: 12 LAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPD 71
L MY + ++ MP N+++W TL++G QN + D L ++ M G P
Sbjct: 59 LITMYSHCADVPSAVRLFDAMPRPNLVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPT 118
Query: 72 KITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFL 131
+ S + + LA G Q+H V+ G ++ V S+L MYS+ G L ++ + F
Sbjct: 119 QFALSSAARAAAALAARHAGAQLHCVGVRLGFDAELFVASNLADMYSKSGLLVEACRVFD 178
Query: 132 ECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEAND 173
+ D V W++MI Y +G E A+ F M ++ D
Sbjct: 179 QMPQKDAVAWTAMIDGYAKNGNLEAAVIAFRDMRREGLVGAD 220
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 73 ITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISS-LISMYSRCGCLDDSVKTFL 131
+ + + SC L G+ +HA +V +GA+ +++ LI+MYS C + +V+ F
Sbjct: 18 LRLAAPLQSCGRAGDLRLGRCLHARLVLSGAAAASTFLANHLITMYSHCADVPSAVRLFD 77
Query: 132 ECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM 164
++V W+++++ + +A+ F M
Sbjct: 78 AMPRPNLVSWTTLVSGLTQNSMHRDALAAFSSM 110
>gi|297722071|ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa Japonica Group]
Length = 706
Score = 320 bits (820), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 159/430 (36%), Positives = 254/430 (59%), Gaps = 15/430 (3%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
+ + G + + V M R+ W +I QN + L + M G RP+ +
Sbjct: 277 FGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSV 336
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
+S+++ C+ LA L G+++HA +++ +DV +S+LI+MY +CG LD + + F E
Sbjct: 337 ISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEP 396
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
D+V+W+SMI Y HG GE+A+ +F M + +T++ L ACS+ G ++G E
Sbjct: 397 KDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREI 456
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK 255
F+ M +P EHY+C+VDLLGR G ++EA LI+NMPV+ +A+IW L+ AC+ H+
Sbjct: 457 FNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHR 516
Query: 256 STDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWL 315
+ ++A A+++L + P +A PYVLLS+I+ S RW+ S+ R+ + RN+ K PG SW+
Sbjct: 517 NAEIAEFAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWI 576
Query: 316 EIKNQVHQFTMGDK-SHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLK 374
E +VH FT GD +HP I LE+L + GY D +HD+D E+K ++L+
Sbjct: 577 EYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADGSFVLHDIDEEQKSHSLR 636
Query: 375 HHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNREIIVRDASRFHHFR 420
+HSE+ A+A+ + G+ + + K I++I +REII+RDA+RFHHF+
Sbjct: 637 YHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKITSREIILRDANRFHHFK 696
Query: 421 NGKCSCGDYW 430
+G CSC DYW
Sbjct: 697 DGFCSCRDYW 706
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 85/159 (53%), Gaps = 4/159 (2%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F++D+ A S+L MY+K G+L + ++V ++++ W ++I G AQ+GL E L ++
Sbjct: 364 FDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFH 423
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV--ISSLISMYSR 119
MR+ G PD IT++ +++CS + +G++I + +S+ G S ++ + R
Sbjct: 424 DMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMT-VNSSIRPGAEHYSCMVDLLGR 482
Query: 120 CGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEA 157
G ++++ D V+W +++ A H E A
Sbjct: 483 SGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIA 521
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 125/271 (46%), Gaps = 27/271 (9%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+VA +++ Y ++G + E + MP RNV++W +I+G AQNG + NL R
Sbjct: 173 DVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNG-------EVNLAR 225
Query: 65 -MVGFRPDKITFVSVISSCSELATLGQGQQIH--AEVVKAGASLDVGVISSLISMYSRCG 121
+ P++ + +S + L Q + AE+ A V ++++ + + G
Sbjct: 226 KLFEVMPER----NEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRG 281
Query: 122 CLDDSVKTFLE--CEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
+ D+ KT E CE D WS+MI AY + EA++ F +M + N + +S+
Sbjct: 282 MV-DAAKTVFEKMCERDDGT-WSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISI 339
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L C+ + + G E M++ + ++ + +CG LD+A + K
Sbjct: 340 LTVCAALAVLDYGREVHAAMLRCSFDMDVFA-VSALITMYIKCGNLDKAKRVFHTFEPK- 397
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGV 270
+ ++W ++++ H + E+ LG+
Sbjct: 398 DIVMWNSMITGYAQHG-------LGEQALGI 421
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 107/243 (44%), Gaps = 25/243 (10%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+ +AH+ ++G++ MP+R ++ L+AG +N L + L L R + R
Sbjct: 22 ARIAHL-ARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAAL---GLFRRMPSR 77
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASL----DVGVISSLISMYSRCGCLDD 125
D ++ ++IS L +Q + A AS+ V +SL+ Y R G L D
Sbjct: 78 -DLASYNALISG------LSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLAD 130
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
+++ F + + V ++ ++ G+ EA LF++M ++ V + ++L
Sbjct: 131 AIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDV----VAWTAMLSGYCQ 186
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
G + FD M K+ + +T ++ + G ++ A L MP + N + W
Sbjct: 187 AGRITEARALFDEMPKR-----NVVSWTAMISGYAQNGEVNLARKLFEVMPER-NEVSWT 240
Query: 246 TLL 248
+L
Sbjct: 241 AML 243
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 96/211 (45%), Gaps = 19/211 (9%)
Query: 28 VIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELAT 87
+ R MP R++ ++ LI+G + + + D + + F P ++F S++
Sbjct: 70 LFRRMPSRDLASYNALISGLSLR--RQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGL 127
Query: 88 LGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAA 147
L ++ ++ + ++ L+ G ++++ + F E DVV W++M++
Sbjct: 128 LADAIRLFQQMPERNHVSYTVLLGGLLD----AGRVNEARRLFDEMPDRDVVAWTAMLSG 183
Query: 148 YGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKP 207
Y G+ EA LF++M ++ N V++ +++ + G + F++M P
Sbjct: 184 YCQAGRITEARALFDEMPKR----NVVSWTAMISGYAQNGEVNLARKLFEVM-------P 232
Query: 208 RLEHYTCVVDLLG--RCGYLDEAAALIRNMP 236
+ L+G + G++++AA L MP
Sbjct: 233 ERNEVSWTAMLVGYIQAGHVEDAAELFNAMP 263
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 320 bits (820), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 171/449 (38%), Positives = 260/449 (57%), Gaps = 25/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + ++ ++L MY K + V + R ++W +I G AQNG +ED + +
Sbjct: 292 GLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLF 351
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M++ +PD T VSVI + ++++ Q + IH ++ DV V+++LI MY++C
Sbjct: 352 TRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKC 411
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ + F V+ W++MI YG HG G+ A+ LFE+M+ N+ TF+S+L
Sbjct: 412 GRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVL 471
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL ++G E+F M + Y +P +EHY +VDLLGR G LDEA A I+ MP+
Sbjct: 472 SACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPG 531
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
++ +L ACK HK+ ++A A++I + PQ+ +VLL+NI+A+A W+ V+ R A
Sbjct: 532 LSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTA 591
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M + ++K PG S +++KN++H F G +H ++ EI L +L E+K GYVPDT +
Sbjct: 592 MEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIKAVGYVPDTDS- 650
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
+HD++ + K L HSEKLAIAF GLI P K IS
Sbjct: 651 IHDVEDDVKAQLLNTHSEKLAIAF-----GLIRTAPGTTIQIKKNLRVCNDCHNATKLIS 705
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+ REII+RD RFHHF++GKCSCGDYW
Sbjct: 706 LVTGREIIMRDIQRFHHFKDGKCSCGDYW 734
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 137/266 (51%), Gaps = 7/266 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + + +A ++LA+MY K + +V MP+R+ +AW L+AG A+NGLA ++
Sbjct: 89 GIDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEM- 147
Query: 61 NLMRMV---GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMY 117
++RM G RPD IT VSV+ +C+ L ++ HA +++G V V ++++ Y
Sbjct: 148 -VVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAY 206
Query: 118 SRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
+CG + + F + V W++MI Y +G EA+ LF +M ++ + DV+ +
Sbjct: 207 CKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVL 266
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
+ L AC G ++GM +L+V + + ++ + +C +D A+ + +
Sbjct: 267 AALQACGELGCLDEGMRVHELLV-RIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDR 325
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRI 263
+ + W ++ C + ++ A R+
Sbjct: 326 RTQ-VSWNAMILGCAQNGCSEDAVRL 350
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 152/318 (47%), Gaps = 14/318 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E + +++ Y K G + V MP +N ++W +I G AQNG + + L +
Sbjct: 191 GLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALF 250
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
N M G ++ ++ + +C EL L +G ++H +V+ G +V V+++LI+MYS+C
Sbjct: 251 NRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKC 310
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
+D + F E + V W++MI +G E+A+ LF +M+ + + + T VS++
Sbjct: 311 KRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVI 370
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEH----YTCVVDLLGRCGYLDEAAALIRNMP 236
A L + + Y + L+ T ++D+ +CG ++ A L N
Sbjct: 371 PA-----LADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILF-NSA 424
Query: 237 VKANAIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLSNIHASAKRWQGV 294
+ + I W ++ +H A + EE+ +G+ P + +LS + +G
Sbjct: 425 RERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEG- 483
Query: 295 SEFREAMRERNVKKEPGV 312
E+ +M+E + EPG+
Sbjct: 484 REYFTSMKE-DYGLEPGM 500
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 91/193 (47%), Gaps = 3/193 (1%)
Query: 57 LDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISM 116
L + M G P TF S++ C+ L G+ +HA++ G + ++L +M
Sbjct: 44 LAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANM 103
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEAND-VT 175
Y++C D+ + F D V W++++A Y +G A+ + +M+++E E D +T
Sbjct: 104 YAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSIT 163
Query: 176 FVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM 235
VS+L AC++ E ++ + + T ++D +CG + A + M
Sbjct: 164 LVSVLPACANARALAACREAHAFAIRSGLEE-LVNVATAILDAYCKCGDIRAARVVFDWM 222
Query: 236 PVKANAIIWKTLL 248
P K N++ W ++
Sbjct: 223 PTK-NSVSWNAMI 234
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 320 bits (820), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 171/449 (38%), Positives = 260/449 (57%), Gaps = 25/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + ++ ++L MY K + V + R ++W +I G AQNG +ED + +
Sbjct: 292 GLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLF 351
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M++ +PD T VSVI + ++++ Q + IH ++ DV V+++LI MY++C
Sbjct: 352 TRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKC 411
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ + F V+ W++MI YG HG G+ A+ LFE+M+ N+ TF+S+L
Sbjct: 412 GRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVL 471
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL ++G E+F M + Y +P +EHY +VDLLGR G LDEA A I+ MP+
Sbjct: 472 SACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPG 531
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
++ +L ACK HK+ ++A A++I + PQ+ +VLL+NI+A+A W+ V+ R A
Sbjct: 532 LSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTA 591
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M + ++K PG S +++KN++H F G +H ++ EI L +L E+K GYVPDT +
Sbjct: 592 MEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIKAVGYVPDTDS- 650
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
+HD++ + K L HSEKLAIAF GLI P K IS
Sbjct: 651 IHDVEDDVKAQLLNTHSEKLAIAF-----GLIRTAPGTTIQIKKNLRVCNDCHNATKLIS 705
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+ REII+RD RFHHF++GKCSCGDYW
Sbjct: 706 LVTGREIIMRDIQRFHHFKDGKCSCGDYW 734
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 137/266 (51%), Gaps = 7/266 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + + +A ++LA+MY K + +V MP+R+ +AW L+AG A+NGLA ++
Sbjct: 89 GIDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEM- 147
Query: 61 NLMRMV---GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMY 117
++RM G RPD IT VSV+ +C+ L ++ HA +++G V V ++++ Y
Sbjct: 148 -VVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAY 206
Query: 118 SRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
+CG + + F + V W++MI Y +G EA+ LF +M ++ + DV+ +
Sbjct: 207 CKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVL 266
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
+ L AC G ++GM +L+V + + ++ + +C +D A+ + +
Sbjct: 267 AALQACGELGCLDEGMRVHELLV-RIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDR 325
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRI 263
+ + W ++ C + ++ A R+
Sbjct: 326 RTQ-VSWNAMILGCAQNGCSEDAVRL 350
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 152/318 (47%), Gaps = 14/318 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E + +++ Y K G + V MP +N ++W +I G AQNG + + L +
Sbjct: 191 GLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALF 250
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
N M G ++ ++ + +C EL L +G ++H +V+ G +V V+++LI+MYS+C
Sbjct: 251 NRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKC 310
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
+D + F E + V W++MI +G E+A+ LF +M+ + + + T VS++
Sbjct: 311 KRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVI 370
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEH----YTCVVDLLGRCGYLDEAAALIRNMP 236
A L + + Y + L+ T ++D+ +CG ++ A L N
Sbjct: 371 PA-----LADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILF-NSA 424
Query: 237 VKANAIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLSNIHASAKRWQGV 294
+ + I W ++ +H A + EE+ +G+ P + +LS + +G
Sbjct: 425 RERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEG- 483
Query: 295 SEFREAMRERNVKKEPGV 312
E+ +M+E + EPG+
Sbjct: 484 REYFTSMKE-DYGLEPGM 500
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 91/193 (47%), Gaps = 3/193 (1%)
Query: 57 LDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISM 116
L + M G P TF S++ C+ L G+ +HA++ G + ++L +M
Sbjct: 44 LAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANM 103
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEAND-VT 175
Y++C D+ + F D V W++++A Y +G A+ + +M+++E E D +T
Sbjct: 104 YAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSIT 163
Query: 176 FVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM 235
VS+L AC++ E ++ + + T ++D +CG + A + M
Sbjct: 164 LVSVLPACANARALAACREAHAFAIRSGLEE-LVNVATAILDAYCKCGDIRAARVVFDWM 222
Query: 236 PVKANAIIWKTLL 248
P K N++ W ++
Sbjct: 223 PTK-NSVSWNAMI 234
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 320 bits (820), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 165/450 (36%), Positives = 256/450 (56%), Gaps = 26/450 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G L ++L +Y + + ++ P +++ +W +I+G QNGL + + +
Sbjct: 345 GIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLF 404
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M M P+ +T S++S+C++L L G+ +H + +V V ++L+ MY++C
Sbjct: 405 QEM-MPQLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKC 463
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + ++ + F +VV W++MI YG HG G+EA+ LF +M Q VTF+S+L
Sbjct: 464 GSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSIL 523
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
YACSH GL +G E F M Y +P EHY C+VD+LGR G L A I MP++
Sbjct: 524 YACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPG 583
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+W LL AC HK+T+MA ++ + ++P++ YVLLSNI+++ + + + R+
Sbjct: 584 PAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQV 643
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDT-GA 359
+++R + K PG + +EI +Q + FT GD+SHP++ I LE+LT +M+ GY +T
Sbjct: 644 VKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTT 703
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYI 400
+HD++ EEKE + HSEKLAIAF GLI P K+I
Sbjct: 704 ALHDVEDEEKELMVNVHSEKLAIAF-----GLISTKPGTEIRIIKNLRVCLDCHTATKFI 758
Query: 401 SEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
S+I R I+VRDA+RFHHF+NG CSCGDYW
Sbjct: 759 SKITERVIVVRDANRFHHFKNGICSCGDYW 788
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 90/180 (50%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +L GS++ +Y K KV +MP R+ + W T+I+G ++N ED + +
Sbjct: 143 GVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVF 202
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M VG D T +V+++ +EL G I K G DV V++ LIS+YS+C
Sbjct: 203 VDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKC 262
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G F + + D++ +++MI+ Y F+ + E A+ LF ++ N T V L+
Sbjct: 263 GKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLI 322
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 124/274 (45%), Gaps = 5/274 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D+ + L +Y K G +G + + ++I++ +I+G N E + +
Sbjct: 244 GLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLF 303
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ G R + T V +I L + I +K G L V ++L ++Y R
Sbjct: 304 RELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRL 363
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
+ + + F E + W++MI+ Y +G + AI+LF++M + N VT S+L
Sbjct: 364 NEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEM-MPQLSPNPVTVTSIL 422
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+ G G ++ ++K R + + T +VD+ +CG + EA L ++ V N
Sbjct: 423 SACAQLGALSIG-KWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLF-DLMVDKN 480
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNP 272
+ W +++ H A ++ E+L G+ P
Sbjct: 481 VVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPP 514
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 117/270 (43%), Gaps = 3/270 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G DL + + L H + G++ ++ + ++ + LI G + NGL + + Y
Sbjct: 41 GIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLY 100
Query: 61 -NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+L + RPD T+ IS+ S L G +HA + G + ++ V S+++ +Y +
Sbjct: 101 THLRKXTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFK 160
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
+ + K F D VLW++MI+ + + E++I +F M + T ++
Sbjct: 161 FTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATV 220
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L A + GM L KK + T ++ L +CG + L + +
Sbjct: 221 LTAVAELQEYRLGMGIQCLASKKGLHSD-VYVLTGLISLYSKCGKSCKGRILFDQID-QP 278
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILG 269
+ I + ++S + T+ A + E+L
Sbjct: 279 DLISYNAMISGYTFNHETESAVTLFRELLA 308
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 168/444 (37%), Positives = 260/444 (58%), Gaps = 16/444 (3%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E D+V+ +++ Y K G + + MP +++ AW LI+ Q G ++ L+ ++
Sbjct: 300 EKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHE 359
Query: 63 MRMVGF-RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
+++ +PD++T VS +S+C++L + G IH + K G L+ + +SLI MY +CG
Sbjct: 360 LQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCG 419
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
L ++ F E DV +WS+MIA HG G++AI LF +M++ + + N VTF ++L
Sbjct: 420 DLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILC 479
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
ACSH GL E+G FF+ M Y P ++HY C+VD+LGR G L+EA LI MP+ A
Sbjct: 480 ACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAA 539
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
+W LL AC H++ +A + +++ + P + YVLLSNI+A A +W VS R+ M
Sbjct: 540 SVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLM 599
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
R+ +KKEPG S +E+ VH+F +GD SHP + +I L+E+ + ++ GYVP+ +
Sbjct: 600 RDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIYAKLDEIVARLETIGYVPNKSHLL 659
Query: 362 HDMDSEE-KEYNLKHHSEKLAIAFAEHTRGLIVMLPF--------------KYISEIKNR 406
++ E+ KE L HSEKLAIAF + G + K +S++ +R
Sbjct: 660 QLVEEEDVKEQALFLHSEKLAIAFGLISTGQSQPIRIVKNLRVCGDCHSVAKLVSKLYDR 719
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EI++RD RFHHFR G CSC DYW
Sbjct: 720 EILLRDRYRFHHFREGHCSCMDYW 743
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 137/293 (46%), Gaps = 11/293 (3%)
Query: 21 SLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLA-EDVLDQYNLMRMVGFRPDKITFVSVI 79
SL ++V +P N+ W TLI A + + +L ++ PDK TF +I
Sbjct: 84 SLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLI 143
Query: 80 SSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVV 139
+ SEL L G+ H V+K DV +++SLI Y++CG L + F+ DVV
Sbjct: 144 KAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVV 203
Query: 140 LWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLM 199
W+SMI A+ G EEA+ LF++ME + + N +T V +L AC+ K+ EF +
Sbjct: 204 SWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACA----KKSDFEFGRWV 259
Query: 200 ---VKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKS 256
+++ R L ++D+ +CG +++A L MP K + + W T+L
Sbjct: 260 HSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEK-DIVSWTTMLVGYAKIGE 318
Query: 257 TDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKE 309
D A I + + N AA L+S K + + F E + K +
Sbjct: 319 YDAAQGIFDAM--PNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPD 369
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 137/282 (48%), Gaps = 34/282 (12%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ +SL H Y K G L G +V +P R+V++W ++I Q G E+ L+ + M
Sbjct: 170 DVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEME 229
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+P+ IT V V+S+C++ + G+ +H+ + + + + ++++ MY++CG ++
Sbjct: 230 TQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVE 289
Query: 125 DSVKTFLECEYSDVVLWSSM-------------------------------IAAYGFHGK 153
D+ + F + D+V W++M I+AY GK
Sbjct: 290 DAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGK 349
Query: 154 GEEAINLFEQME-QKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY 212
+EA+ LF +++ K + ++VT VS L AC+ G + G + + +KK K
Sbjct: 350 PKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLG-GWIHVYIKKQGMKLNCHLT 408
Query: 213 TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
T ++D+ +CG L +A + ++ K + +W +++ H
Sbjct: 409 TSLIDMYCKCGDLQKALMVFHSVERK-DVFVWSAMIAGLAMH 449
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 81/165 (49%), Gaps = 6/165 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +L+ +SL MY K G L + V + ++V W +IAG A +G +D + +
Sbjct: 400 GMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALF 459
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEV-VKAGASLDVGVISSLISMYSR 119
+ M+ +P+ +TF +++ +CS + + +G+ ++ + G V + ++ + R
Sbjct: 460 SKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGR 519
Query: 120 CGCLDDSVKTFLECEYSDVV-LWSSMIAAYGFHGKGEEAINLFEQ 163
G L+++V+ + + +W +++ A H E + L EQ
Sbjct: 520 AGLLEEAVELIEKMPMAPAASVWGALLGACTIH----ENVVLAEQ 560
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 165/450 (36%), Positives = 256/450 (56%), Gaps = 26/450 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G L ++L +Y + + ++ P +++ +W +I+G QNGL + + +
Sbjct: 345 GIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLF 404
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M M P+ +T S++S+C++L L G+ +H + +V V ++L+ MY++C
Sbjct: 405 QEM-MPQLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKC 463
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + ++ + F +VV W++MI YG HG G+EA+ LF +M Q VTF+S+L
Sbjct: 464 GSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSIL 523
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
YACSH GL +G E F M Y +P EHY C+VD+LGR G L A I MP++
Sbjct: 524 YACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPG 583
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+W LL AC HK+T+MA ++ + ++P++ YVLLSNI+++ + + + R+
Sbjct: 584 PAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQV 643
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDT-GA 359
+++R + K PG + +EI +Q + FT GD+SHP++ I LE+LT +M+ GY +T
Sbjct: 644 VKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTT 703
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYI 400
+HD++ EEKE + HSEKLAIAF GLI P K+I
Sbjct: 704 ALHDVEDEEKELMVNVHSEKLAIAF-----GLISTKPGTEIRIIKNLRVCLDCHTATKFI 758
Query: 401 SEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
S+I R I+VRDA+RFHHF+NG CSCGDYW
Sbjct: 759 SKITERVIVVRDANRFHHFKNGICSCGDYW 788
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 90/180 (50%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +L GS++ +Y K KV +MP R+ + W T+I+G ++N ED + +
Sbjct: 143 GVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVF 202
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M VG D T +V+++ +EL G I K G DV V++ LIS+YS+C
Sbjct: 203 VDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKC 262
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G F + + D++ +++MI+ Y F+ + E A+ LF ++ N T V L+
Sbjct: 263 GKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLI 322
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 124/274 (45%), Gaps = 5/274 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D+ + L +Y K G +G + + ++I++ +I+G N E + +
Sbjct: 244 GLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLF 303
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ G R + T V +I L + I +K G L V ++L ++Y R
Sbjct: 304 RELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRL 363
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
+ + + F E + W++MI+ Y +G + AI+LF++M + N VT S+L
Sbjct: 364 NEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEM-MPQLSPNPVTVTSIL 422
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+ G G ++ ++K R + + T +VD+ +CG + EA L ++ V N
Sbjct: 423 SACAQLGALSIG-KWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLF-DLMVDKN 480
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNP 272
+ W +++ H A ++ E+L G+ P
Sbjct: 481 VVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPP 514
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 117/270 (43%), Gaps = 3/270 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G DL + + L H + G++ ++ + ++ + LI G + NGL + + Y
Sbjct: 41 GIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLY 100
Query: 61 -NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+L + RPD T+ IS+ S L G +HA + G + ++ V S+++ +Y +
Sbjct: 101 THLRKKTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFK 160
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
+ + K F D VLW++MI+ + + E++I +F M + T ++
Sbjct: 161 FTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATV 220
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L A + GM L KK + T ++ L +CG + L + +
Sbjct: 221 LTAVAELQEYRLGMGIQCLASKKGLHSD-VYVLTGLISLYSKCGKSCKGRILFDQID-QP 278
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILG 269
+ I + ++S + T+ A + E+L
Sbjct: 279 DLISYNAMISGYTFNHETESAVTLFRELLA 308
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 165/443 (37%), Positives = 261/443 (58%), Gaps = 17/443 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+V+ +++ Y K + MP +++ AW LI+G Q+G ++ L + ++
Sbjct: 408 DVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQ 467
Query: 65 MV--GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
+ G RPD++T +S +S+C++L + G+ IH + K L+ + +SLI MYS+ G
Sbjct: 468 LTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNRNLATSLIDMYSKSGD 527
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
++ +++ F DV +WS+MIA HG+GE AI LF M++ + + N VTF +LL A
Sbjct: 528 VEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCA 587
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
CSH GL ++G FD M + Y P+ +HY+C+VD+LGR G+L+EA I MP+ +A
Sbjct: 588 CSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEALKFIEGMPLAPSAS 647
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMR 302
+W LL AC H + ++A + +L + P + YVLLSN++A W+GVSE R+ MR
Sbjct: 648 VWGALLGACCIHGNLELAEKACSRLLEIEPGNHGAYVLLSNLYAKTGDWEGVSELRQQMR 707
Query: 303 ERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMH 362
+ +KKE G S +EI VH+F +GD +HP S +I L+E+ + ++ GYV +T +
Sbjct: 708 DSGLKKETGCSSIEIDGTVHEFIVGDNAHPLSRDIYAKLDEIMARLRSHGYVANTLCMLQ 767
Query: 363 DMDSEE-KEYNLKHHSEKLAIAF----AEHTRGLIVMLPF----------KYISEIKNRE 407
++ EE KE LK HSEK+AIAF A+ + + ++ K +S++ R+
Sbjct: 768 FVEEEEMKEKALKLHSEKMAIAFGLIRADSQQAIRIVKNLRVCRDCHTVAKMVSKVYGRD 827
Query: 408 IIVRDASRFHHFRNGKCSCGDYW 430
I++RD RFHHF G CSC DYW
Sbjct: 828 IVLRDRYRFHHFSGGHCSCQDYW 850
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 144/331 (43%), Gaps = 13/331 (3%)
Query: 5 DLVAGSSL--AHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNG-LAEDVLDQYN 61
D A S L A + +L KV +P N+ +W LI A + + VL
Sbjct: 170 DPYAASELFTAAAFSSFSALDYARKVFDQIPQPNLYSWNILIRALATSSDPIQSVLVFIR 229
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
++ F P+K TF +I + +E G+ +H +K DV V++SLI Y+ CG
Sbjct: 230 MLHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVHGMAIKTSFGDDVFVLNSLIHFYASCG 289
Query: 122 CLDDSVKTF--LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
LD + F +E D+V W+SM+ + G ++A++LFE+M + N VT VS+
Sbjct: 290 HLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSV 349
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
+ AC+ G + D + + L +D+ +CG ++ A L NM K
Sbjct: 350 MSACAKTMNLTLGRKVCDY-IDRNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNME-KR 407
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPY--VLLSNIHASAKRWQGVSEF 297
+ + W T++ IA +I P+ P VL+S S + + ++ F
Sbjct: 408 DVVSWTTIIDGYAKMSEHG----IARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIF 463
Query: 298 REAMRERNVKKEPGVSWLEIKNQVHQFTMGD 328
RE ++ + V+ L + Q D
Sbjct: 464 RELQLTKSGARPDQVTLLSTLSACAQLGAMD 494
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 80/158 (50%), Gaps = 4/158 (2%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
+L+ +SL MY KSG + + +V + ++V W +IAG A +G E ++ +
Sbjct: 509 QLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLD 568
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSRCG 121
M+ +P+ +TF +++ +CS + +G+++ E+ + G S ++ + R G
Sbjct: 569 MQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAG 628
Query: 122 CLDDSVKTFLECE--YSDVVLWSSMIAAYGFHGKGEEA 157
L++++K F+E +W +++ A HG E A
Sbjct: 629 HLEEALK-FIEGMPLAPSASVWGALLGACCIHGNLELA 665
>gi|326499323|dbj|BAK06152.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 175/446 (39%), Positives = 267/446 (59%), Gaps = 16/446 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D ++L +Y K G L K+ + R+V+AW +I+G QNGLAE + Y
Sbjct: 135 GFGSDRFVLTALVVLYSKCGQLGVARKLFDAIRDRSVVAWNAMISGYEQNGLAERGIGVY 194
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ PD +TFV+ +S+C++ L G+++ VV + V + S+L++MY+RC
Sbjct: 195 KEMQAAKAVPDSMTFVATLSACAQAGALDLGREVERRVVSERMDISVFLGSALVNMYARC 254
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +D + + F + +VV W+SMIA YG HG G EAI LF M + N VTFV++L
Sbjct: 255 GVVDKARRWFDALQERNVVTWTSMIAGYGMHGHGREAIKLFHLMRCEGPPPNHVTFVAVL 314
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRN-MPVKA 239
AC+H GL +G + F M + Y PR+EHY +VD+ GR G LDEA I + MP +
Sbjct: 315 SACAHAGLVMEGRDAFACMKRVYGLVPRVEHYCSMVDMFGRAGLLDEAMQFISDYMPGEP 374
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
+W +L ACK HK+ ++ +AE ++ + P++ + +VLLSNI+A + + V + R
Sbjct: 375 GPEVWTAVLGACKMHKNFNLGVEVAERLIALEPENPSYHVLLSNIYALSGKMHHVEKVRN 434
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M +R +KK+ G S +E+ H F MG+KSHP++ EI YLEEL + GY+P+T +
Sbjct: 435 TMIKRRLKKQIGFSLIELGGTSHLFRMGEKSHPQTTEIYHYLEELIHRITAAGYMPETES 494
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFA-----EHTRGLIVM----------LPFKYISEIK 404
+H+++ EE+E L++HSEKLA+A+ T + V+ L K++S ++
Sbjct: 495 VLHELEEEEREGALRYHSEKLAVAYGLMMSVGSTTPIRVIKNLRICGDCHLAIKFMSAVE 554
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
NREI+VRD RFHHF++GKCSC +YW
Sbjct: 555 NREIVVRDKHRFHHFKDGKCSCLEYW 580
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 107/222 (48%), Gaps = 2/222 (0%)
Query: 33 PIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQ 92
P + + +L A +GL + Y + TF +V +C++L+ L G
Sbjct: 66 PAPDSFLFSSLTRTAAHHGLPVAAIAFYRGLLSAALPFSSFTFTAVAKACADLSALRTGA 125
Query: 93 QIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHG 152
IHA + G D V+++L+ +YS+CG L + K F VV W++MI+ Y +G
Sbjct: 126 AIHAHSILLGFGSDRFVLTALVVLYSKCGQLGVARKLFDAIRDRSVVAWNAMISGYEQNG 185
Query: 153 KGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY 212
E I ++++M+ + + +TFV+ L AC+ G + G E +V + R +
Sbjct: 186 LAERGIGVYKEMQAAKAVPDSMTFVATLSACAQAGALDLGREVERRVVSE-RMDISVFLG 244
Query: 213 TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
+ +V++ RCG +D+A + + N + W ++++ H
Sbjct: 245 SALVNMYARCGVVDKARRWFDALQER-NVVTWTSMIAGYGMH 285
>gi|108707831|gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586055|gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group]
Length = 798
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 159/430 (36%), Positives = 254/430 (59%), Gaps = 15/430 (3%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
+ + G + + V M R+ W +I QN + L + M G RP+ +
Sbjct: 277 FGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSV 336
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
+S+++ C+ LA L G+++HA +++ +DV +S+LI+MY +CG LD + + F E
Sbjct: 337 ISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEP 396
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
D+V+W+SMI Y HG GE+A+ +F M + +T++ L ACS+ G ++G E
Sbjct: 397 KDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREI 456
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK 255
F+ M +P EHY+C+VDLLGR G ++EA LI+NMPV+ +A+IW L+ AC+ H+
Sbjct: 457 FNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHR 516
Query: 256 STDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWL 315
+ ++A A+++L + P +A PYVLLS+I+ S RW+ S+ R+ + RN+ K PG SW+
Sbjct: 517 NAEIAEFAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWI 576
Query: 316 EIKNQVHQFTMGDK-SHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLK 374
E +VH FT GD +HP I LE+L + GY D +HD+D E+K ++L+
Sbjct: 577 EYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADGSFVLHDIDEEQKSHSLR 636
Query: 375 HHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNREIIVRDASRFHHFR 420
+HSE+ A+A+ + G+ + + K I++I +REII+RDA+RFHHF+
Sbjct: 637 YHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKITSREIILRDANRFHHFK 696
Query: 421 NGKCSCGDYW 430
+G CSC DYW
Sbjct: 697 DGFCSCRDYW 706
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 85/159 (53%), Gaps = 4/159 (2%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F++D+ A S+L MY+K G+L + ++V ++++ W ++I G AQ+GL E L ++
Sbjct: 364 FDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFH 423
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV--ISSLISMYSR 119
MR+ G PD IT++ +++CS + +G++I + +S+ G S ++ + R
Sbjct: 424 DMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMT-VNSSIRPGAEHYSCMVDLLGR 482
Query: 120 CGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEA 157
G ++++ D V+W +++ A H E A
Sbjct: 483 SGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIA 521
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 126/271 (46%), Gaps = 27/271 (9%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+VA +++ Y ++G + E + MP RNV++W +I+G AQNG + NL R
Sbjct: 173 DVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNG-------EVNLAR 225
Query: 65 -MVGFRPDKITFVSVISSCSELATLGQGQQIH--AEVVKAGASLDVGVISSLISMYSRCG 121
+ P++ + +S + L Q + AE+ A V ++++ + + G
Sbjct: 226 KLFEVMPER----NEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRG 281
Query: 122 CLDDSVKTFLE--CEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
+ D+ KT E CE D WS+MI AY + EA++ F +M + N + +S+
Sbjct: 282 MV-DAAKTVFEKMCERDDGT-WSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISI 339
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L C+ + + G E M+ + + + ++ + +CG LD+A + K
Sbjct: 340 LTVCAALAVLDYGREVHAAML-RCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPK- 397
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGV 270
+ ++W ++++ H + E+ LG+
Sbjct: 398 DIVMWNSMITGYAQHG-------LGEQALGI 421
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 105/241 (43%), Gaps = 21/241 (8%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+ +AH+ ++G++ MP+R ++ L+AG +N L + L L R + R
Sbjct: 22 ARIAHL-ARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAAL---GLFRRMPSR 77
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVIS--SLISMYSRCGCLDDSV 127
D ++ ++IS S L + A A V+S SL+ Y R G L D++
Sbjct: 78 -DLASYNALISGLS----LRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAI 132
Query: 128 KTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCG 187
+ F + + V ++ ++ G+ EA LF++M ++ V + ++L G
Sbjct: 133 RLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDV----VAWTAMLSGYCQAG 188
Query: 188 LKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTL 247
+ FD M K+ + +T ++ + G ++ A L MP + N + W +
Sbjct: 189 RITEARALFDEMPKR-----NVVSWTAMISGYAQNGEVNLARKLFEVMPER-NEVSWTAM 242
Query: 248 L 248
L
Sbjct: 243 L 243
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 96/211 (45%), Gaps = 19/211 (9%)
Query: 28 VIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELAT 87
+ R MP R++ ++ LI+G + + + D + + F P ++F S++
Sbjct: 70 LFRRMPSRDLASYNALISGLSLR--RQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGL 127
Query: 88 LGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAA 147
L ++ ++ + ++ L+ G ++++ + F E DVV W++M++
Sbjct: 128 LADAIRLFQQMPERNHVSYTVLLGGLLD----AGRVNEARRLFDEMPDRDVVAWTAMLSG 183
Query: 148 YGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKP 207
Y G+ EA LF++M ++ N V++ +++ + G + F++M P
Sbjct: 184 YCQAGRITEARALFDEMPKR----NVVSWTAMISGYAQNGEVNLARKLFEVM-------P 232
Query: 208 RLEHYTCVVDLLG--RCGYLDEAAALIRNMP 236
+ L+G + G++++AA L MP
Sbjct: 233 ERNEVSWTAMLVGYIQAGHVEDAAELFNAMP 263
>gi|449437638|ref|XP_004136598.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 564
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 160/444 (36%), Positives = 257/444 (57%), Gaps = 15/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF L +SL + Y K + KV MP+RN++AW +I+G A+ G ++ ++ +
Sbjct: 122 GFGSSLFVQTSLVNFYGKCEEIGFARKVFEEMPVRNLVAWTAMISGHARVGAVDEAMELF 181
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G +PD +T VSV+S+C+ L G +HA + K D+ + ++L+ MY++C
Sbjct: 182 REMQKAGIQPDAMTLVSVVSACAVAGALDIGYWLHAYIEKYFVLTDLELSTALVDMYAKC 241
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
GC++ + + F+ D WSSMI + +HG ++AI+ F+QM + E + VTF+++L
Sbjct: 242 GCIERAKQVFVHMPVKDTTAWSSMIMGFAYHGLAQDAIDAFQQMLETEVTPDHVTFLAVL 301
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+H GL +G F+ LM+ ++ +P +EHY C VDLL R G ++EA + M + N
Sbjct: 302 SACAHGGLVSRGRRFWSLML-EFGIEPSVEHYGCKVDLLCRSGLVEEAYRITTTMKIPPN 360
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A W++LL CK K ++ +A +L + P +A Y+++SN+++S +W+ +SE R+
Sbjct: 361 AATWRSLLMGCKKKKLLNLGEIVARYLLELEPLNAENYIMISNLYSSLSQWEKMSELRKV 420
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+E+ +K PG S +E+ VH+F MGD+SHP + ++EE++ ++ GY P
Sbjct: 421 MKEKCIKPVPGCSSIEVDGVVHEFVMGDQSHPEVKMLREFMEEMSMRVRDSGYRPSISDV 480
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA-EHTRGLIVML-------------PFKYISEIKNR 406
+H + EEKE L HSE+ AIA+ TR IV+ K IS++ R
Sbjct: 481 LHKVVDEEKECALSEHSERFAIAYGLLKTRAPIVIRVVKNLRVCVDCHEVIKIISKLYER 540
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EIIVRD RFH F G CSC D+W
Sbjct: 541 EIIVRDRVRFHKFIKGTCSCKDFW 564
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 126/237 (53%), Gaps = 4/237 (1%)
Query: 20 GSLVEGEKVIRLMPIRNVIAWITLIAGKAQ-NGLAEDVLDQYNLMRMVGFR-PDKITFVS 77
G++ V +P N+ +W +LI G +Q + L+++ + + + G+ P+ T
Sbjct: 38 GNINYARSVFAQIPHPNIFSWNSLIKGYSQIHTLSKEPIFLFKKLTETGYPVPNSFTLAF 97
Query: 78 VISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSD 137
V+ +C+ + G+G Q+H+ V+K G + V +SL++ Y +C + + K F E +
Sbjct: 98 VLKACAIVTAFGEGLQVHSHVLKDGFGSSLFVQTSLVNFYGKCEEIGFARKVFEEMPVRN 157
Query: 138 VVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFD 197
+V W++MI+ + G +EA+ LF +M++ + + +T VS++ AC+ G + G +
Sbjct: 158 LVAWTAMISGHARVGAVDEAMELFREMQKAGIQPDAMTLVSVVSACAVAGALDIGY-WLH 216
Query: 198 LMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
++KY LE T +VD+ +CG ++ A + +MPVK + W +++ H
Sbjct: 217 AYIEKYFVLTDLELSTALVDMYAKCGCIERAKQVFVHMPVK-DTTAWSSMIMGFAYH 272
>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 157/441 (35%), Positives = 259/441 (58%), Gaps = 15/441 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D++ +++ ++Y + G + + +++++W ++I NGL + L+ + ++
Sbjct: 483 DIMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLK 542
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+PD I +S +S+ + L++L +G++IH +++ G L+ + SSL+ MY+ CG ++
Sbjct: 543 QTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVE 602
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+S K F + D++LW+SMI A G HG G EAI LF++M + + +TF++LLYACS
Sbjct: 603 NSRKMFHSVKQRDLILWTSMINANGMHGCGNEAIALFKKMTDENVIPDHITFLALLYACS 662
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL +G FF++M Y+ +P EHY C+VDLL R L+EA +R+MP+K ++ +W
Sbjct: 663 HSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYQFVRSMPIKPSSEVW 722
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
LL AC H + ++ A+E+L + +++ Y L+SNI A+ RW V E R M+
Sbjct: 723 CALLGACHIHSNKELGELAAKELLQSDTKNSGKYALISNIFAADGRWNDVEEVRLRMKGN 782
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEM-KLRGYVPDTGADMHD 363
+KK PG SW+E+ N++H F DKSHP++ +I L L + T + K GY+ T H+
Sbjct: 783 GLKKNPGCSWIEVDNKIHTFMARDKSHPQTDDIYLKLAQFTKLLGKKGGYIAQTKFVFHN 842
Query: 364 MDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVMLP------------FKYISEIKNREII 409
+ EEK L HSE+LA+ + +G + + FK SE+ R ++
Sbjct: 843 VSEEEKTQMLYRHSERLALGYGLLVTPKGTSIRITKNLRICDDCHTFFKIASEVSQRALV 902
Query: 410 VRDASRFHHFRNGKCSCGDYW 430
VRDA+RFHHF G CSCGD+W
Sbjct: 903 VRDANRFHHFERGLCSCGDFW 923
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 135/250 (54%), Gaps = 9/250 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ ++L MY K G + + E+V M R+ ++W TL++G QN L D L+ + M+
Sbjct: 282 DVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQ 341
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+PD+++ +++I++ L G+++HA ++ G ++ + ++LI MY++C C+
Sbjct: 342 NSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVK 401
Query: 125 DSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
F EC + D++ W+++IA Y + EAINLF +++ K + + + S+L AC
Sbjct: 402 HMGYAF-ECMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRAC 460
Query: 184 SHCGLKEKGM--EFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
S GLK + E + K+ L++ +V++ G G+ D A ++ K +
Sbjct: 461 S--GLKSRNFIREIHGYVFKRDLADIMLQN--AIVNVYGEVGHRDYARRAFESIRSK-DI 515
Query: 242 IIWKTLLSAC 251
+ W ++++ C
Sbjct: 516 VSWTSMITCC 525
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 119/249 (47%), Gaps = 4/249 (1%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
L + L HMY K GSL + KV M R + W ++ +G + ++ Y M
Sbjct: 77 LSAFLATKLLHMYEKCGSLKDAVKVFDEMTERTIFTWNAMMGAFVSSGKYLEAIELYKEM 136
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
R++G D TF SV+ +C L G +IH VK G V V ++LI+MY +CG L
Sbjct: 137 RVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDL 196
Query: 124 DDSVKTF--LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+ F + E D V W+S+I+A+ GK EA++LF +M++ +N TFV+ L
Sbjct: 197 GGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQ 256
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
+ GM +K + ++ + +CG +++A + +M + +
Sbjct: 257 GVEDPSFVKLGMGIHGAALKS-NHFADVYVANALIAMYAKCGRMEDAERVFASMLCR-DY 314
Query: 242 IIWKTLLSA 250
+ W TLLS
Sbjct: 315 VSWNTLLSG 323
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 128/256 (50%), Gaps = 7/256 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + ++ G++L MY K + M +++I+W T+IAG AQN + ++ +
Sbjct: 379 GLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQNECHLEAINLF 438
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+++ G D + SV+ +CS L + ++IH V K + D+ + ++++++Y
Sbjct: 439 RKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDLA-DIMLQNAIVNVYGEV 497
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G D + + F D+V W+SMI +G EA+ LF ++Q + + + +S L
Sbjct: 498 GHRDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISAL 557
Query: 181 YACSHCGLKEKGMEFFDLMVKK--YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
A ++ +KG E +++K + P + +VD+ CG ++ + + ++ +
Sbjct: 558 SATANLSSLKKGKEIHGFLIRKGFFLEGPIA---SSLVDMYACCGTVENSRKMFHSVKQR 614
Query: 239 ANAIIWKTLLSACKTH 254
+ I+W ++++A H
Sbjct: 615 -DLILWTSMINANGMH 629
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 86/172 (50%), Gaps = 8/172 (4%)
Query: 82 CSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLW 141
C + L QGQQ+HA ++K + L + + L+ MY +CG L D+VK F E + W
Sbjct: 56 CVAVKALPQGQQLHARLLK--SHLSAFLATKLLHMYEKCGSLKDAVKVFDEMTERTIFTW 113
Query: 142 SSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVK 201
++M+ A+ GK EAI L+++M + TF S+L AC G G E + VK
Sbjct: 114 NAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVK 173
Query: 202 KYRRKPRLEHYTC--VVDLLGRCGYLDEAAALIRN-MPVKANAIIWKTLLSA 250
+ + C ++ + G+CG L A L M K + + W +++SA
Sbjct: 174 CGFGEFV---FVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISA 222
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 116/253 (45%), Gaps = 6/253 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIR---LMPIRNVIAWITLIAGKAQNGLAEDVL 57
GF + ++L MY K G L G +V+ +M + ++W ++I+ G + L
Sbjct: 175 GFGEFVFVCNALIAMYGKCGDL-GGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEAL 233
Query: 58 DQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMY 117
+ M+ VG + TFV+ + + + + G IH +K+ DV V ++LI+MY
Sbjct: 234 SLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMY 293
Query: 118 SRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
++CG ++D+ + F D V W+++++ + +A+N F M+ + + V+ +
Sbjct: 294 AKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVL 353
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
+L+ A G G E ++ ++ ++D+ +C + M
Sbjct: 354 NLIAASGRSGNLLNGKEVHAYAIRN-GLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHE 412
Query: 238 KANAIIWKTLLSA 250
K + I W T+++
Sbjct: 413 K-DLISWTTIIAG 424
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 76/160 (47%), Gaps = 8/160 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF L+ SSL MY G++ K+ + R++I W ++I +G + + +
Sbjct: 580 GFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNEAIALF 639
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV--ISSLISMYS 118
M PD ITF++++ +CS + +G++ E++K G L+ + ++ + S
Sbjct: 640 KKMTDENVIPDHITFLALLYACSHSGLMVEGKRFF-EIMKYGYQLEPWPEHYACMVDLLS 698
Query: 119 RCGCLDDS---VKTFLECEYSDVVLWSSMIAAYGFHGKGE 155
R L+++ V++ S+V W +++ A H E
Sbjct: 699 RSNSLEEAYQFVRSMPIKPSSEV--WCALLGACHIHSNKE 736
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 167/451 (37%), Positives = 256/451 (56%), Gaps = 26/451 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF L ++ +Y K G + + + ++V++W TLI G L ++ L +
Sbjct: 246 GFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLF 305
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVK--AGASLDVGVISSLISMYS 118
M G P+ +T +SV+ +C+ L + G+ IH + K G + + +SLI MY+
Sbjct: 306 QEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYA 365
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+CG ++ + + F + + W++MI + HG+ A +LF +M + E +D+T V
Sbjct: 366 KCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVG 425
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
LL ACSH GL + G F + + Y P+LEHY C++DLLG G EA +I MP++
Sbjct: 426 LLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPME 485
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
+ +IW +LL ACK H + ++A A++++ + P+++ YVLLSNI+A+A RW+ V+ R
Sbjct: 486 PDGVIWCSLLKACKMHGNLELAESFAQKLMEIEPENSGSYVLLSNIYATAGRWEDVARIR 545
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
E + + +KK PG S +EI + VH+F +GDK HP+S EI LEE+ ++ G+VPDT
Sbjct: 546 EVLNGKGMKKVPGCSSIEIDSVVHEFIIGDKLHPQSREIYRMLEEMDVLLEEAGFVPDTS 605
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKY 399
+ +M+ E KE L+HHSEKLAIAF GLI P K
Sbjct: 606 EVLQEMEEEWKEGALRHHSEKLAIAF-----GLISTKPGTKLTVVKNLRVCRNCHEATKL 660
Query: 400 ISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
IS+I REI+ RD +RFHHFR+G CSC DYW
Sbjct: 661 ISKIYKREIVARDRTRFHHFRDGVCSCCDYW 691
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 153/310 (49%), Gaps = 13/310 (4%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+V+ ++L Y G + KV + R+V++W +I G +N E+ L+ + M
Sbjct: 148 DVVSCTALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMM 207
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVK-AGASLDVGVISSLISMYSRCGCL 123
RPD+ T VSV+S+C++ ++ G++IH V G + ++++ I +YS+CG +
Sbjct: 208 RTNVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDV 267
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
+ + F DVV W+++I Y +EA+ LF++M + NDVT +S+L AC
Sbjct: 268 EIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPAC 327
Query: 184 SHCGLKEKGM---EFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA- 239
+H G + G + D +K L T ++D+ +CG ++ A + +M K+
Sbjct: 328 AHLGAIDIGRWIHVYIDKRLKGVTNGSALR--TSLIDMYAKCGDIEAAHQVFNSMMHKSL 385
Query: 240 ---NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSE 296
NA+I+ + + + + D+ R+ + G+ P D LLS S G
Sbjct: 386 SSWNAMIFGFAMHG-RANAAFDLFSRMRKN--GIEPDDITLVGLLSACSHSGLLDLGRHI 442
Query: 297 FREAMRERNV 306
F+ ++ N+
Sbjct: 443 FKSVTQDYNI 452
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 131/286 (45%), Gaps = 37/286 (12%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
N++ W T++ G A + L+ Y M G P+ TF ++ SC++ T +G+QIH
Sbjct: 47 NLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIH 106
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTF--------LECEY------------ 135
A+V+K G LD +SLISMY+R G L+D+ K F + C
Sbjct: 107 AQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVR 166
Query: 136 -----------SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
DVV W++MI Y + EEA+ LF++M + ++ T VS+L AC+
Sbjct: 167 SARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACA 226
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
G E G E L+ + L+ + L +CG ++ A+ L + K + + W
Sbjct: 227 QSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCK-DVVSW 285
Query: 245 KTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASA 288
TL+ A + +E+L G +P D +LS + A A
Sbjct: 286 NTLIGGYTHMNLYKEALLLFQEMLRSGESPNDV---TMLSVLPACA 328
>gi|326532424|dbj|BAK05141.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 413
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 165/396 (41%), Positives = 239/396 (60%), Gaps = 14/396 (3%)
Query: 49 QNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVG 108
QNG+A+ + M++ PD T VS+I +C+ LA L G+ H V+ G + +
Sbjct: 18 QNGMADAAFLVFRKMQVCNVEPDVATMVSLIPACAHLAALQHGKCSHGSVIVRGMAPETS 77
Query: 109 VISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE 168
+ ++LI MY++CG + S + F D+V W++MIA YG HG G+EA LF M+
Sbjct: 78 ICNALIDMYAKCGRIAFSRQIFDAMPSRDIVSWNTMIAGYGIHGLGKEATALFLDMKNHA 137
Query: 169 FEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEA 228
E + VTF+ L+ ACSH GL +G +F +M +KY PR+EHY +VDLL R G+LDEA
Sbjct: 138 CEPDGVTFICLISACSHSGLVTEGKHWFHMMAQKYGITPRMEHYISMVDLLARGGFLDEA 197
Query: 229 AALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASA 288
I++MP+KA+ +W LL+AC+ HK+ D+ ++A I + P+ +VLLSNI ++A
Sbjct: 198 YQFIQSMPMKADVRVWGALLAACRVHKNIDLGKQVARVIQKLGPEGTGNFVLLSNIFSAA 257
Query: 289 KRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEM 348
R+ +E R +E+ KK PG SW+EI +H F GD+SHPRS EI L + ++
Sbjct: 258 GRFDEAAEVRIIQKEKGFKKSPGCSWIEINGSLHAFIGGDRSHPRSPEIYQELHNILVDI 317
Query: 349 KLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFAEHT----RGLIVM---------- 394
GY DT + D++ EEKE L +HSEKLAIAF T + + V
Sbjct: 318 NKLGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGILTLSEDKDIFVTKNLRVCGDCH 377
Query: 395 LPFKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
KY+S ++ R+IIVRDA+RFHHF+NG+CSCGD+W
Sbjct: 378 TVIKYMSLVRRRDIIVRDANRFHHFKNGQCSCGDFW 413
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 75/144 (52%), Gaps = 2/144 (1%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L MY K G + ++ MP R++++W T+IAG +GL ++ + M+
Sbjct: 80 NALIDMYAKCGRIAFSRQIFDAMPSRDIVSWNTMIAGYGIHGLGKEATALFLDMKNHACE 139
Query: 70 PDKITFVSVISSCSELATLGQGQQ-IHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
PD +TF+ +IS+CS + +G+ H K G + + S++ + +R G LD++ +
Sbjct: 140 PDGVTFICLISACSHSGLVTEGKHWFHMMAQKYGITPRMEHYISMVDLLARGGFLDEAYQ 199
Query: 129 TFLECEY-SDVVLWSSMIAAYGFH 151
+DV +W +++AA H
Sbjct: 200 FIQSMPMKADVRVWGALLAACRVH 223
>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
Length = 798
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 158/430 (36%), Positives = 254/430 (59%), Gaps = 15/430 (3%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
+ + G + + V M R+ W +I QN + L + M G RP+ +
Sbjct: 277 FGQRGMVDAAKTVFEKMRERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSV 336
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
+S+++ C+ LA L G+++HA +++ +DV +S+LI+MY +CG LD + + F E
Sbjct: 337 ISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEP 396
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
D+V+W+SMI Y HG GE+A+ +F M + +T++ L ACS+ G ++G E
Sbjct: 397 KDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREI 456
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK 255
F+ M +P EHY+C+VDLLGR G ++EA LI+NMPV+ +A+IW L+ AC+ H+
Sbjct: 457 FNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHR 516
Query: 256 STDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWL 315
+ ++A A+++L + P +A PYVLLS+I+ S RW+ S+ R+ + RN+ K PG SW+
Sbjct: 517 NAEIAEVAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWI 576
Query: 316 EIKNQVHQFTMGDK-SHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLK 374
E +VH FT GD +HP I LE+L + GY D +HD+D E+K ++L+
Sbjct: 577 EYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADGSFVLHDIDEEQKSHSLR 636
Query: 375 HHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNREIIVRDASRFHHFR 420
+HSE+ A+A+ + G+ + + K I++I +REI++RDA+RFHHF+
Sbjct: 637 YHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKITSREIVLRDANRFHHFK 696
Query: 421 NGKCSCGDYW 430
+G CSC DYW
Sbjct: 697 DGFCSCRDYW 706
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 85/159 (53%), Gaps = 4/159 (2%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F++D+ A S+L MY+K G+L + ++V ++++ W ++I G AQ+GL E L ++
Sbjct: 364 FDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFH 423
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV--ISSLISMYSR 119
MR+ G PD IT++ +++CS + +G++I + +S+ G S ++ + R
Sbjct: 424 DMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMT-VNSSIRPGAEHYSCMVDLLGR 482
Query: 120 CGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEA 157
G ++++ D V+W +++ A H E A
Sbjct: 483 SGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIA 521
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 123/269 (45%), Gaps = 23/269 (8%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+VA +++ Y ++G + E + MP RNV++W +I+G AQNG + NL R
Sbjct: 173 DVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNG-------EVNLAR 225
Query: 65 -MVGFRPDKITFVSVISSCSELATLGQGQQIH--AEVVKAGASLDVGVISSLISMYSRCG 121
+ P++ + +S + L Q + AE+ A V ++++ + + G
Sbjct: 226 KLFEVMPER----NEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRG 281
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+D + F + D WS+MI AY + EA++ F +M + N + +S+L
Sbjct: 282 MVDAAKTVFEKMRERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILT 341
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
C+ + + G E M+ + + + ++ + +CG LD+A + K +
Sbjct: 342 VCAALAVLDYGREVHAAML-RCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPK-DI 399
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGV 270
++W ++++ H + E+ LG+
Sbjct: 400 VMWNSMITGYAQHG-------LGEQALGI 421
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 105/241 (43%), Gaps = 21/241 (8%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+ +AH+ ++G++ MP+R ++ L+AG +N L + L L R + R
Sbjct: 22 ARIAHL-ARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAAL---GLFRRMPSR 77
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVIS--SLISMYSRCGCLDDSV 127
D ++ ++IS S L + A A V+S SL+ Y R G L D++
Sbjct: 78 -DLASYNALISGLS----LRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAI 132
Query: 128 KTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCG 187
+ F + + V ++ ++ G+ EA LF++M ++ V + ++L G
Sbjct: 133 RLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDV----VAWTAMLSGYCQAG 188
Query: 188 LKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTL 247
+ FD M K+ + +T ++ + G ++ A L MP + N + W +
Sbjct: 189 RITEARALFDEMPKR-----NVVSWTAMISGYAQNGEVNLARKLFEVMPER-NEVSWTAM 242
Query: 248 L 248
L
Sbjct: 243 L 243
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 96/211 (45%), Gaps = 19/211 (9%)
Query: 28 VIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELAT 87
+ R MP R++ ++ LI+G + + + D + + F P ++F S++
Sbjct: 70 LFRRMPSRDLASYNALISGLSLR--RQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGL 127
Query: 88 LGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAA 147
L ++ ++ + ++ L+ G ++++ + F E DVV W++M++
Sbjct: 128 LADAIRLFQQMPERNHVSYTVLLGGLLD----AGRVNEARRLFDEMPDRDVVAWTAMLSG 183
Query: 148 YGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKP 207
Y G+ EA LF++M ++ N V++ +++ + G + F++M P
Sbjct: 184 YCQAGRITEARALFDEMPKR----NVVSWTAMISGYAQNGEVNLARKLFEVM-------P 232
Query: 208 RLEHYTCVVDLLG--RCGYLDEAAALIRNMP 236
+ L+G + G++++AA L MP
Sbjct: 233 ERNEVSWTAMLVGYIQAGHVEDAAELFNAMP 263
>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 822
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 166/445 (37%), Positives = 259/445 (58%), Gaps = 15/445 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+LD+ ++L +Y K + K+ + +NV++W T+I G G L+ +
Sbjct: 378 GFDLDVYVSNALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGYENLGEGGKALNMF 437
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
++TF S + +C+ LA++ G Q+H +K + V V +SLI MY++C
Sbjct: 438 REALRNQVSVTEVTFSSALGACASLASMELGVQVHGLAIKTNNAKRVAVSNSLIDMYAKC 497
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + F E E DV W+++I+ Y HG G +A+ +F+ M+ + + N +TF+ +L
Sbjct: 498 GDIKVAQTVFNEMETIDVASWNALISGYSTHGLGRQALRIFDIMKGSDCKPNGLTFLGVL 557
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
CS+ GL ++G + F+ M+ + +P LEHYTC+V L GR G LD+A LI +P + +
Sbjct: 558 SGCSNAGLIDQGQDCFESMICDHGIEPCLEHYTCMVRLFGRSGQLDKAMNLIEGIPYEPS 617
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+IW+ +LSA + + A R AEEIL +NP+D A YVLLSN++A AK+W V+ R++
Sbjct: 618 VMIWRAMLSASMNQYNEEFARRSAEEILKINPKDEATYVLLSNMYAGAKQWANVASIRKS 677
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+E+ VKKEPG+SW+E + VH F++G HP I+ LE L + GYVPD A
Sbjct: 678 MKEKGVKKEPGLSWIEHQGDVHFFSVGSSDHPDMKLINGMLEWLNMKATRAGYVPDRNAV 737
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA----EHTRGLIVML-----------PFKYISEIKN 405
+ DMD EEK+ L HSE+LA+A+ +R I+++ K IS I
Sbjct: 738 LLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQ 797
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
R++++RD +RFHHF G CSC D+W
Sbjct: 798 RDLVIRDMNRFHHFHAGVCSCDDHW 822
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 135/268 (50%), Gaps = 2/268 (0%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
+ELD G L +Y + G + + KV MP +V+ W +IA QNG +D +
Sbjct: 278 YELDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFI 337
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
MR P++ T S+++ C+ G G+Q+H VVK G LDV V ++LI +Y++C
Sbjct: 338 RMREGFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCE 397
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+D +VK F E +VV W+++I Y G+G +A+N+F + + + +VTF S L
Sbjct: 398 KMDTAVKLFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALG 457
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
AC+ E G++ L +K K R+ ++D+ +CG + A + M +
Sbjct: 458 ACASLASMELGVQVHGLAIKTNNAK-RVAVSNSLIDMYAKCGDIKVAQTVFNEMET-IDV 515
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILG 269
W L+S TH A RI + + G
Sbjct: 516 ASWNALISGYSTHGLGRQALRIFDIMKG 543
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 121/250 (48%), Gaps = 6/250 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G++ + G++L + Y GS+ V + ++++ W +++ +NG ED L
Sbjct: 176 GYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYVENGCFEDSLQLL 235
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M M GF P+ TF + + + L + +H +++K LD V L+ +Y++
Sbjct: 236 SRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPRVGVGLLQLYTQL 295
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + D+ K F E +DVV WS MIA + +G +A+++F +M + N+ T S+L
Sbjct: 296 GDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFVVPNEFTLSSIL 355
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY--TCVVDLLGRCGYLDEAAALIRNMPVK 238
C+ G + L+VK L+ Y ++D+ +C +D A L + K
Sbjct: 356 NGCAIGKCSGLGEQLHGLVVKV---GFDLDVYVSNALIDVYAKCEKMDTAVKLFAELSSK 412
Query: 239 ANAIIWKTLL 248
N + W T++
Sbjct: 413 -NVVSWNTVI 421
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 124/270 (45%), Gaps = 12/270 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G LDL A + L + Y+K+G + + MP RN ++++TL G A +D + Y
Sbjct: 79 GSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSYVTLTQGYA----CQDPVGLY 134
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ + G + F S + L +H+ +VK G + V ++LI+ YS C
Sbjct: 135 SRLHREGHELNPHVFTSFLKLFVSLDKAEICWWLHSPIVKLGYDSNAFVGAALINAYSVC 194
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +D + F D+V+W+ +++ Y +G E+++ L +M F N+ TF + L
Sbjct: 195 GSVDSARSVFEGILCKDIVVWAGIVSCYVENGCFEDSLQLLSRMGMDGFMPNNYTFDTAL 254
Query: 181 YACSHCGLKEKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
A G ++K Y PR+ ++ L + G + +A + MP K
Sbjct: 255 KASIGLGAFHFAKSVHGQILKTCYELDPRVG--VGLLQLYTQLGDMSDAFKVFNEMP-KN 311
Query: 240 NAIIWKTLLSA-CKT---HKSTDMAGRIAE 265
+ + W +++ C+ +K+ D+ R+ E
Sbjct: 312 DVVPWSFMIARFCQNGFCNKAVDIFIRMRE 341
>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 874
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 180/473 (38%), Positives = 262/473 (55%), Gaps = 61/473 (12%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAG-------------- 46
GFE D ++L MY + G + + M +++++W T+I G
Sbjct: 420 GFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLL 479
Query: 47 -KAQNGLAE---DVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAG 102
Q G AE + D Y + +P+ +T ++V+ C+ LA LG+G++IHA VK
Sbjct: 480 HDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQM 539
Query: 103 ASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFE 162
S DV V S+L+ MY++CGCL+ S F + +V+ W+ +I AYG HGKGEEA+ LF
Sbjct: 540 LSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKGEEALKLFR 599
Query: 163 QM-----EQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVD 217
+M +E N+VT++++ + SH G+ ++G+ F M K+ +P +HY C+VD
Sbjct: 600 RMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPTSDHYACLVD 659
Query: 218 LLGRCGYLDEAAALIRNMPVKANAI-IWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAA 276
LLGR G ++EA LI+ MP + W +LL ACK H++ ++ G IA + L
Sbjct: 660 LLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGACKIHQNLEI-GEIAAKNL-------- 710
Query: 277 PYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSME 336
+VL N+ + S M+E+ V+KEPG SW+E ++VH+F GD SHP+S E
Sbjct: 711 -FVLDPNVLDYGTKQ---SMLGRKMKEKGVRKEPGCSWIEHGDEVHKFLAGDVSHPQSKE 766
Query: 337 IDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP 396
+ YLE L+ MK GYVPDT +H++ EEKE L HSE+LAIAF GL+ P
Sbjct: 767 VHEYLETLSLRMKKEGYVPDTSCVLHNVGEEEKETMLCGHSERLAIAF-----GLLNTSP 821
Query: 397 -------------------FKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
K+IS+I +REII+RD RFHHFRNG CSCGDYW
Sbjct: 822 GTTIRVAKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 874
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 130/290 (44%), Gaps = 23/290 (7%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRM-VG 67
G +L MY +G V M R + W +IAG +N + ++ + M +G
Sbjct: 326 GCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELG 385
Query: 68 FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV 127
P+ +T SV+ +C + + IH+ VVK G D V ++L+ MYSR G ++ +
Sbjct: 386 LSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIAR 445
Query: 128 KTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFE----------------- 170
F D+V W++MI Y G+ ++A+NL M++ + E
Sbjct: 446 SIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPL 505
Query: 171 -ANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAA 229
N VT +++L C+ KG E VK+ K + + +VD+ +CG L+ +
Sbjct: 506 KPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQMLSK-DVAVGSALVDMYAKCGCLNLSR 564
Query: 230 ALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAP 277
+ M V+ N I W L+ A H + A ++ ++ G N ++ P
Sbjct: 565 TVFEQMSVR-NVITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREIRP 613
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 123/247 (49%), Gaps = 8/247 (3%)
Query: 8 AGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVG 67
++L MY K G + E + + + +++++W T+I+ +QN E+ L ++M G
Sbjct: 223 TNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSG 282
Query: 68 FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVIS-SLISMYSRCGCLDDS 126
RP+ +T SV+ +CS L LG G++IHA V+ ++ + +L+ MY C +
Sbjct: 283 VRPNGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKG 342
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQME-QKEFEANDVTFVSLLYACSH 185
F + +W++MIA Y + EAI LF +M + N VT S+L AC
Sbjct: 343 RLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVR 402
Query: 186 CG--LKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
C L ++G+ +VK K + ++D+ R G ++ A ++ +M K + +
Sbjct: 403 CESFLDKEGIH--SCVVKWGFEKDKYVQ-NALMDMYSRMGRIEIARSIFGSMNRK-DIVS 458
Query: 244 WKTLLSA 250
W T+++
Sbjct: 459 WNTMITG 465
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 75/147 (51%), Gaps = 1/147 (0%)
Query: 40 WITLIAGKAQNGLA-EDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEV 98
W++ + + Q+ + Y M G PD F +V+ + + + L G+Q+HA V
Sbjct: 52 WVSHLRSQTQSSSTFHQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHV 111
Query: 99 VKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAI 158
K G +L V +SL++MY +CG +D + + F E D V W+SMI A + E A+
Sbjct: 112 FKFGQALPTAVPNSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAV 171
Query: 159 NLFEQMEQKEFEANDVTFVSLLYACSH 185
+LF M + T VS+ +ACS+
Sbjct: 172 HLFRLMLLENVGPTSFTLVSVAHACSN 198
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 92/186 (49%), Gaps = 2/186 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G L +SL +MY K G + +V + R+ ++W ++I + E + +
Sbjct: 115 GQALPTAVPNSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLF 174
Query: 61 NLMRMVGFRPDKITFVSVISSCSELAT-LGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
LM + P T VSV +CS L L G+Q+HA V++ G ++L++MY++
Sbjct: 175 RLMLLENVGPTSFTLVSVAHACSNLINGLLLGKQVHAFVLRNG-DWRTFTNNALVTMYAK 233
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G + ++ F + D+V W+++I++ + + EEA+ M Q N VT S+
Sbjct: 234 LGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASV 293
Query: 180 LYACSH 185
L ACSH
Sbjct: 294 LPACSH 299
>gi|356525712|ref|XP_003531467.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Glycine max]
Length = 691
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 167/440 (37%), Positives = 257/440 (58%), Gaps = 15/440 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D +L MY K GS+ + V MP + + W ++IA A +G +E+ L Y MR
Sbjct: 253 DHFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSLYFEMR 312
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G D T VI C+ LA+L +Q HA +V+ G + D+ ++L+ YS+ G ++
Sbjct: 313 DSGTTVDHFTISIVIRICARLASLEHAKQAHAALVRHGFATDIVANTALVDFYSKWGRME 372
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D+ F + +V+ W+++IA YG HG+G+EA+ +FEQM Q+ VTF+++L ACS
Sbjct: 373 DARHVFNRMRHKNVISWNALIAGYGNHGQGQEAVEMFEQMLQEGVTPTHVTFLAVLSACS 432
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
+ GL ++G E F M + ++ KPR HY C+++LLGR LDEA ALIR P K A +W
Sbjct: 433 YSGLSQRGWEIFYSMKRDHKVKPRAMHYACMIELLGRESLLDEAYALIRTAPFKPTANMW 492
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
LL+AC+ HK+ ++ AE++ G+ P+ Y++L N++ S+ + + + + ++++
Sbjct: 493 AALLTACRMHKNLELGKLAAEKLYGMEPEKLCNYIVLLNLYNSSGKLKEAAGILQTLKKK 552
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
++ P SW+E+K Q + F GDKSH ++ EI ++ L E+ GY + + D+
Sbjct: 553 GLRMLPACSWVEVKKQPYAFLCGDKSHSQTKEIYQKVDNLMVEICKHGYAEENETLLPDV 612
Query: 365 DSEEKEYNLKHHSEKLAIAFA----------EHTRGLIVM----LPFKYISEIKNREIIV 410
D EE+ LK+HSEKLAIAF + T+G V K I+ + REI+V
Sbjct: 613 DEEEQRI-LKYHSEKLAIAFGLINTPHWTPLQITQGHRVCGDCHSAIKLIAMVTGREIVV 671
Query: 411 RDASRFHHFRNGKCSCGDYW 430
RDASRFHHFRNG CSCGDYW
Sbjct: 672 RDASRFHHFRNGSCSCGDYW 691
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 141/309 (45%), Gaps = 4/309 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE DL + + M++K G +++ K+ MP ++V +W+T++ G G + +
Sbjct: 148 GFEPDLYVMNRVLFMHVKCGLMLDARKLFDEMPEKDVASWMTMVGGLVDTGNFSEAFRLF 207
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M TF ++I + + L + G+QIH+ +K G D V +LI MYS+C
Sbjct: 208 LCMWKEFNDGRSRTFATMIRASAGLGLVQVGKQIHSCALKRGVGDDHFVSCALIDMYSKC 267
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++D+ F + V W+S+IA+Y HG EEA++L+ +M + T ++
Sbjct: 268 GSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSLYFEMRDSGTTVDHFTISIVI 327
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
C+ E + +V ++ + T +VD + G +++A + M K N
Sbjct: 328 RICARLASLEHAKQAHAALV-RHGFATDIVANTALVDFYSKWGRMEDARHVFNRMRHK-N 385
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
I W L++ H A + E++L GV P +LS S +G F
Sbjct: 386 VISWNALIAGYGNHGQGQEAVEMFEQMLQEGVTPTHVTFLAVLSACSYSGLSQRGWEIFY 445
Query: 299 EAMRERNVK 307
R+ VK
Sbjct: 446 SMKRDHKVK 454
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 99/196 (50%), Gaps = 6/196 (3%)
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
G+ T+ +++S+C L ++ +++ ++ +G D+ V++ ++ M+ +CG + D+
Sbjct: 113 GYGVGASTYDALVSACVGLRSIRGVKRVFNYMINSGFEPDLYVMNRVLFMHVKCGLMLDA 172
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHC 186
K F E DV W +M+ G EA LF M ++ + TF +++ A +
Sbjct: 173 RKLFDEMPEKDVASWMTMVGGLVDTGNFSEAFRLFLCMWKEFNDGRSRTFATMIRASAGL 232
Query: 187 GLKEKGMEFFDLMVKKYRRKPRLEHY-TC-VVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
GL + G + +K R +H+ +C ++D+ +CG +++A + MP K + W
Sbjct: 233 GLVQVGKQIHSCALK---RGVGDDHFVSCALIDMYSKCGSIEDAHCVFDQMPEK-TTVGW 288
Query: 245 KTLLSACKTHKSTDMA 260
+++++ H ++ A
Sbjct: 289 NSIIASYALHGYSEEA 304
>gi|226505202|ref|NP_001141725.1| uncharacterized protein LOC100273856 [Zea mays]
gi|194705708|gb|ACF86938.1| unknown [Zea mays]
gi|413956425|gb|AFW89074.1| hypothetical protein ZEAMMB73_742653 [Zea mays]
Length = 635
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 162/450 (36%), Positives = 251/450 (55%), Gaps = 26/450 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + D V S+LA MY K G L + V MP+R+V++W ++ G + +
Sbjct: 192 GIDADAVVWSALADMYAKFGRLDDARSVFDRMPVRDVVSWTAMLDRYFDAGRDGEGFRLF 251
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G P++ T+ V+ +C+E + G+Q+H + K+ S+L+ MYS+
Sbjct: 252 VRMMRSGILPNEFTYAGVLRACAEFTSEKLGKQVHGRMAKSRTGDSCFAGSALVHMYSKY 311
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + +++ F D+V W++MI+ Y +G+ +EA++ F+ + F + VTFV +L
Sbjct: 312 GDMGTAMRVFRGMPKPDLVSWTAMISGYAQNGQPDEALHCFDMLLSSGFRPDHVTFVGVL 371
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+H GL +KG+ F + KY + +HY CV+DLL R G + A +I MPVK N
Sbjct: 372 SACAHAGLVDKGLGIFHSIKDKYGIEHTADHYACVIDLLSRSGLFERAEDMINTMPVKPN 431
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+W +LL C+ HK+ +A AE + + P++ A YV L+NI+AS + V R
Sbjct: 432 KFLWASLLGGCRIHKNVRLAWWAAEALFEIEPENPATYVTLANIYASVGLFDEVENMRRT 491
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M R + K P SW+E+ +VH F +GDKSHP++ EI L++L +M+ GYV DTG
Sbjct: 492 MELRGITKMPASSWIEVGTRVHVFLVGDKSHPQAEEIYALLKKLYVKMREEGYVADTGFV 551
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP--------------------FKYI 400
+HD++ E+K+ ++ +HSE+LA+AF I+ P K I
Sbjct: 552 LHDVEDEQKQQDIGYHSERLAVAFG------IIATPKGSPIKVFKNLRICGDCHTTIKLI 605
Query: 401 SEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
S+I REIIVRD++RFHHF+NG CSC DYW
Sbjct: 606 SKIVQREIIVRDSNRFHHFKNGSCSCRDYW 635
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 107/242 (44%), Gaps = 5/242 (2%)
Query: 22 LVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN-LMRMVGFR--PDKITFVSV 78
L + MP R+ +W +++ ++G L Y ++R G ++ T S
Sbjct: 109 LASARALFDRMPRRDHFSWSAIVSAHVRHGQPRAALAIYRRMLREPGGSGADNEFTASSA 168
Query: 79 ISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDV 138
+++ + G+++H VV+ G D V S+L MY++ G LDD+ F DV
Sbjct: 169 LAAATAARCARAGRELHCHVVRRGIDADAVVWSALADMYAKFGRLDDARSVFDRMPVRDV 228
Query: 139 VLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDL 198
V W++M+ Y G+ E LF +M + N+ T+ +L AC+ ++ G +
Sbjct: 229 VSWTAMLDRYFDAGRDGEGFRLFVRMMRSGILPNEFTYAGVLRACAEFTSEKLGKQVHGR 288
Query: 199 MVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTD 258
M K R + +V + + G + A + R MP K + + W ++S + D
Sbjct: 289 MAKS-RTGDSCFAGSALVHMYSKYGDMGTAMRVFRGMP-KPDLVSWTAMISGYAQNGQPD 346
Query: 259 MA 260
A
Sbjct: 347 EA 348
>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
Length = 1229
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 159/415 (38%), Positives = 248/415 (59%), Gaps = 19/415 (4%)
Query: 32 MPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQG 91
M +++++W +I +N + + ++ Y+ M GF PD ++ SV+ +C + + L G
Sbjct: 269 MGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLG 328
Query: 92 QQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFH 151
++IH + + ++ + ++LI MY++CGCL+ + F + DVV W++MI+AYGF
Sbjct: 329 KKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFS 388
Query: 152 GKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEH 211
G+G +A+ LF +++ + + FV+ L ACSH GL E+G F LM Y+ PRLEH
Sbjct: 389 GRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEH 448
Query: 212 YTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVN 271
C+VDLLGR G + EA I++M ++ N +W LL AC+ H TD+ A+++ +
Sbjct: 449 LACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLA 508
Query: 272 PQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSH 331
P+ + YVLLSNI+A A RW+ V+ R M+ + +KK PG S +E+ +H F +GD+SH
Sbjct: 509 PEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSH 568
Query: 332 PRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFA------ 385
P+S EI L+ L +MK GYVPD+ + +HD++ E+KE +L HSEKLAI FA
Sbjct: 569 PQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKE 628
Query: 386 --EHTRGLIVM-----------LPFKYISEIKNREIIVRDASRFHHFRNGKCSCG 427
E + I + + K IS+I +REII+RD +RFH FR G CSC
Sbjct: 629 EEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCA 683
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 134/313 (42%), Gaps = 18/313 (5%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G L Y + KV +P RNVI +I NG + + + M
Sbjct: 77 GVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNV 136
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
RPD TF V+ +CS T+ G++IH K G S + V + L+SMY +CG L ++
Sbjct: 137 RPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARL 196
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
E DVV W+S++ Y + + ++A+ + +ME + + T SLL A S+
Sbjct: 197 VLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT-T 255
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV---KANAIIWK 245
E M D+ K ++ L + ++ + + EA L M + +A+
Sbjct: 256 TENVMYVKDMFFKMGKKS--LVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSIT 313
Query: 246 TLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSN----IHASAKRWQGVSEFREAM 301
++L AC + + +I I + P +LL N ++A + + E M
Sbjct: 314 SVLPACGDTSALSLGKKIHGYI---ERKKLIPNLLLENALIDMYAKCGCLEKARDVFENM 370
Query: 302 RERNVKKEPGVSW 314
+ R+V VSW
Sbjct: 371 KSRDV-----VSW 378
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 47/88 (53%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
+L+ ++L MY K G L + V M R+V++W +I+ +G D + ++ ++
Sbjct: 343 NLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQ 402
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQ 92
G PD I FV+ +++CS L +G+
Sbjct: 403 DSGLVPDSIAFVTTLAACSHAGLLEEGR 430
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 89/206 (43%), Gaps = 13/206 (6%)
Query: 70 PDKITFV--SVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV 127
P + F+ V+ + ++ TL + +H+ ++ + + L+ Y+ + +
Sbjct: 38 PQETVFLLGQVLDTYPDIRTL---RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASAR 94
Query: 128 KTFLECEYSDVVLWSSMIAAY---GFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
K F E +V++ + MI +Y GF+G+G + +F M + TF +L ACS
Sbjct: 95 KVFDEIPERNVIIINVMIRSYVNNGFYGEG---VKVFGTMCGCNVRPDHYTFPCVLKACS 151
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
G G + K L +V + G+CG+L EA ++ M + + + W
Sbjct: 152 CSGTIVIGRKIHG-SATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMS-RRDVVSW 209
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGV 270
+L+ ++ D A + E+ V
Sbjct: 210 NSLVVGYAQNQRFDDALEVCREMESV 235
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Glycine max]
Length = 1047
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 169/449 (37%), Positives = 260/449 (57%), Gaps = 24/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ DL G++L +Y + G + + + ++ I+W +LI+G AQ+G E+ L +
Sbjct: 604 GYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLF 663
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M G + TF +S+ + +A + G+QIHA ++K G + V + LI++Y++C
Sbjct: 664 SQMSKAGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVLITLYAKC 723
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +DD+ + F E + + W++M+ Y HG G +A++LFE M+Q N VTFV +L
Sbjct: 724 GNIDDAERQFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVL 783
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL ++G+++F M + + P+ EHY CVVDLLGR G L A + MP++ +
Sbjct: 784 SACSHVGLVDEGIKYFQSMREVHGLVPKPEHYACVVDLLGRSGLLSRARRFVEEMPIQPD 843
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A++ +TLLSAC HK+ D+ A +L + P+D+A YVLLSN++A +W R+
Sbjct: 844 AMVCRTLLSACIVHKNIDIGEFAASHLLELEPKDSATYVLLSNMYAVTGKWGCRDRTRQM 903
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M++R VKKEPG SW+E+ N VH F GD+ HP +I YL +L GY+P T +
Sbjct: 904 MKDRGVKKEPGRSWIEVNNSVHAFFAGDQKHPNVDKIYEYLRDLNELAAENGYIPQTNSL 963
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
++D + +K HSEKLAIAF GL+ + KY+S
Sbjct: 964 LNDAERRQKGPTQIIHSEKLAIAF-----GLLSLSSSTPIHVFKNLRVCGDCHNWIKYVS 1018
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+I +R I+VRD+ RFHHF+ G CSC DYW
Sbjct: 1019 KISDRVIVVRDSYRFHHFKGGICSCKDYW 1047
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 154/305 (50%), Gaps = 5/305 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ ++ S L MY K G L K+ R + ++V++W +IAG AQ+ + L+ +
Sbjct: 503 GFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLF 562
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G D I F S IS+C+ + L QGQQIHA+ +G S D+ V ++L+S+Y+RC
Sbjct: 563 KEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARC 622
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + D+ F + D + W+S+I+ + G EEA++LF QM + E N TF +
Sbjct: 623 GKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAV 682
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
A ++ + G + +++K E ++ L +CG +D+A MP K N
Sbjct: 683 SAAANVANVKLGKQIHAMIIKT-GHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEK-N 740
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
I W +L+ H A + E++ LGV P +LS +G+ F
Sbjct: 741 EISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVDEGIKYF- 799
Query: 299 EAMRE 303
++MRE
Sbjct: 800 QSMRE 804
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 139/267 (52%), Gaps = 2/267 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF L+ ++L +Y + G+ + E+V M R+ +++ +LI+G +Q G ++ L+ +
Sbjct: 301 GFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELF 360
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M + +PD +T S++S+CS + L G+Q H+ +KAG S D+ + +L+ +Y +C
Sbjct: 361 KKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKC 420
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
+ + + FL E +VVLW+ M+ AYG E+ +F QM+ + E N T+ S+L
Sbjct: 421 SDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSIL 480
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
CS + G E V K + + + ++D+ + G LD A + R + K +
Sbjct: 481 RTCSSLRAVDLG-EQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEK-D 538
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEI 267
+ W +++ H+ A + +E+
Sbjct: 539 VVSWTAMIAGYAQHEKFAEALNLFKEM 565
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 126/252 (50%), Gaps = 6/252 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAW-ITLIAGKAQNGLAEDVLDQ 59
G D++ +L +Y+K + + NV+ W + L+A + L E
Sbjct: 402 GMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNES-FKI 460
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ M+M G P++ T+ S++ +CS L + G+QIH +V+K G +V V S LI MY++
Sbjct: 461 FTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAK 520
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G LD ++K F + DVV W++MIA Y H K EA+NLF++M+ + ++++ F S
Sbjct: 521 LGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASA 580
Query: 180 LYACSHCGLKEKGMEFF-DLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+ AC+ +G + V Y L +V L RCG + +A + K
Sbjct: 581 ISACAGIQALNQGQQIHAQACVSGY--SDDLSVGNALVSLYARCGKVRDAYFAFDKIFSK 638
Query: 239 ANAIIWKTLLSA 250
N I W +L+S
Sbjct: 639 DN-ISWNSLISG 649
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 125/250 (50%), Gaps = 2/250 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+E L + L +Y K+G L +KV + R+ ++W+ +++G +Q+G E+ + +
Sbjct: 200 GYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLF 259
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G P F SV+S+C+++ G+Q+H V+K G SL+ V ++L+++YSR
Sbjct: 260 CQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRL 319
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + F D V ++S+I+ G ++A+ LF++M + + VT SLL
Sbjct: 320 GNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLL 379
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACS G G +F +K + ++DL +C + A + + N
Sbjct: 380 SACSSVGALLVGKQFHSYAIKAGMSSDIILE-GALLDLYVKCSDIKTAHEFFLSTETE-N 437
Query: 241 AIIWKTLLSA 250
++W +L A
Sbjct: 438 VVLWNVMLVA 447
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 114/269 (42%), Gaps = 19/269 (7%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF ++V L +Y+ G L V MP+R + W ++ +A VL +
Sbjct: 98 GFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLF 157
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQG-------QQIHAEVVKAGASLDVGVISSL 113
M +PD+ T+ V+ C G G ++IHA + G + V + L
Sbjct: 158 RRMLQEKVKPDERTYAGVLRGC------GGGDVPFHCVEKIHARTITHGYENSLFVCNPL 211
Query: 114 ISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEAND 173
I +Y + G L+ + K F + D V W +M++ G EEA+ LF QM
Sbjct: 212 IDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTP 271
Query: 174 VTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC--VVDLLGRCGYLDEAAAL 231
F S+L AC+ + G + L++K+ LE Y C +V L R G A +
Sbjct: 272 YIFSSVLSACTKVEFYKVGEQLHGLVLKQ---GFSLETYVCNALVTLYSRLGNFIPAEQV 328
Query: 232 IRNMPVKANAIIWKTLLSACKTHKSTDMA 260
M ++ + + + +L+S +D A
Sbjct: 329 FNAM-LQRDEVSYNSLISGLSQQGYSDKA 356
>gi|224082530|ref|XP_002306730.1| predicted protein [Populus trichocarpa]
gi|222856179|gb|EEE93726.1| predicted protein [Populus trichocarpa]
Length = 578
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 167/446 (37%), Positives = 266/446 (59%), Gaps = 18/446 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D + G++L +Y K G + EKV M R++ +W LI+G AQ + L +
Sbjct: 135 GFIADALLGTTLLDVYAKVGEIDSAEKVFDEMVKRDIASWNALISGFAQGSKPTEALSLF 194
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M + GF+P++I+ + +S+C++L +G++IH + ++ V + +I MY++C
Sbjct: 195 KRMEIDGFKPNEISVLGALSACAQLGDFKEGEKIHGYIKVERFDMNAQVCNVVIDMYAKC 254
Query: 121 GCLDDSVKTF--LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
G +D + F + C D+V W++MI A+ HG+G +A+ LFE+M+Q +DV++++
Sbjct: 255 GFVDKAYLVFESMSCR-KDIVTWNTMIMAFAMHGEGCKALELFEKMDQSGVSPDDVSYLA 313
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+L AC+H GL E+G F+ M + KP ++HY VVDLLGR G L EA ++ +MP
Sbjct: 314 VLCACNHGGLVEEGFRLFNSM-ENCGVKPNVKHYGSVVDLLGRAGRLHEAYDIVNSMPTV 372
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
+ ++W+TLL A +TH++ ++A ++ +++ + +VLLSN++A+ +RW V R
Sbjct: 373 PDIVLWQTLLGASRTHRNVEIAETVSRKLVEMGSNHCGDFVLLSNVYAARERWADVGRVR 432
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
EAM+ R+VKK PG+S++E +H+F DKSH EI L+E+ +K GYV +T
Sbjct: 433 EAMKNRDVKKVPGLSYIEGNGVIHKFYNADKSHESWREIYAKLDEIRFRVKEYGYVAETS 492
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAF-----AEHTRGLIVM---------LPFKYISEIK 404
+HD+ E+KE L HHSEKLA+AF +E T ++ K IS+I
Sbjct: 493 FVLHDIGEEDKENVLGHHSEKLAVAFGLISTSEGTPIQVIKNLRICGDCHFVIKLISKIY 552
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
+REIIVRD RFH F+ G CSC DYW
Sbjct: 553 DREIIVRDRVRFHRFKEGFCSCRDYW 578
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 121/244 (49%), Gaps = 3/244 (1%)
Query: 40 WITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVV 99
W +I G Q+ + Y M + D +T V+ +C+ + + QIH +V
Sbjct: 73 WNAIIRGFIQSPNPTNAFAWYKSMISKSRKVDALTCSFVLKACARVLARLESIQIHTHIV 132
Query: 100 KAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAIN 159
+ G D + ++L+ +Y++ G +D + K F E D+ W+++I+ + K EA++
Sbjct: 133 RKGFIADALLGTTLLDVYAKVGEIDSAEKVFDEMVKRDIASWNALISGFAQGSKPTEALS 192
Query: 160 LFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLL 219
LF++ME F+ N+++ + L AC+ G ++G E +K R + V+D+
Sbjct: 193 LFKRMEIDGFKPNEISVLGALSACAQLGDFKEG-EKIHGYIKVERFDMNAQVCNVVIDMY 251
Query: 220 GRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAP 277
+CG++D+A + +M + + + W T++ A H A + E++ GV+P D +
Sbjct: 252 AKCGFVDKAYLVFESMSCRKDIVTWNTMIMAFAMHGEGCKALELFEKMDQSGVSPDDVSY 311
Query: 278 YVLL 281
+L
Sbjct: 312 LAVL 315
>gi|224068783|ref|XP_002302824.1| predicted protein [Populus trichocarpa]
gi|222844550|gb|EEE82097.1| predicted protein [Populus trichocarpa]
Length = 581
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 170/451 (37%), Positives = 250/451 (55%), Gaps = 28/451 (6%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + D S+ A M+ + G + K+ + ++++ W T I + + + L
Sbjct: 138 GLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTWATTIEAYVKADMPLEALGLL 197
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLD--VGVISSLISMYS 118
M + G PD IT + VI +CS LA+ +H ++ G + + V ++LI +Y
Sbjct: 198 KQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHG-IITTGFFYNQLLAVETALIDLYV 256
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+CG L + K F + +++ WS+MI+ YG HG G EA+NLF+QM + + + +TFVS
Sbjct: 257 KCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREALNLFDQM-KASVKPDHITFVS 315
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+L ACSH GL +G E F+ M + + PR EHY C+VD+LGR G LDEA I MPV+
Sbjct: 316 ILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACMVDILGRAGKLDEACDFIERMPVR 375
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
NA +W LL AC+ H + D+A +A + ++P +A YV+L NI+ + + R
Sbjct: 376 PNAAVWGALLGACRIHLNVDLAEMVARALFDLDPHNAGRYVILYNIYTLTGKRKEADSIR 435
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
M+ R VKK G S +EIKN+++ F GD+SHP++ I LE L ++ GY PD
Sbjct: 436 TLMKNRGVKKIAGYSVIEIKNKLYAFVAGDRSHPQTDLIYSELERLMDRIRQEGYTPDIN 495
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKY 399
+HD+D E KE L HSEKLAI F GL+ + P K+
Sbjct: 496 FVLHDVDEETKESMLYLHSEKLAIVF-----GLLNLGPGSVIRIRKNLRVCGDCHTATKF 550
Query: 400 ISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
IS++ REI+VRDA RFHHF+NG CSC DYW
Sbjct: 551 ISKVTGREIVVRDAHRFHHFKNGACSCRDYW 581
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 130/311 (41%), Gaps = 5/311 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G++ + +SL MY K +V MP +N ++W +I Q+ ++ +
Sbjct: 40 GYQSQVFISNSLITMYGKCDKYELSRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLF 99
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G RP + +++++ + + + + ++ VV+ G D V S+ M++RC
Sbjct: 100 RQMLSEGSRPSR---GAILNAMACVRSHEEADDVYRVVVENGLDFDQSVQSAAAGMFARC 156
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ + K F D+V W++ I AY EA+ L +QM + + +T + ++
Sbjct: 157 GRVEVARKLFDGIMSKDLVTWATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVI 216
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACS + ++ + L T ++DL +CG L A + M + N
Sbjct: 217 RACSTLASFQLAHIVHGIITTGFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQER-N 275
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEI-LGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
I W ++S H A + +++ V P +LS S +G F
Sbjct: 276 IITWSAMISGYGMHGWGREALNLFDQMKASVKPDHITFVSILSACSHSGLVAEGWECFNS 335
Query: 300 AMRERNVKKEP 310
R+ V P
Sbjct: 336 MARDFGVTPRP 346
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 55/102 (53%)
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M +G +PD TF +I +CS L G +IH +VVK G V + +SLI+MY +C
Sbjct: 1 MLRLGIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDK 60
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM 164
+ S + F E + V WS++I A + +E +LF QM
Sbjct: 61 YELSRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQM 102
>gi|297800868|ref|XP_002868318.1| hypothetical protein ARALYDRAFT_330113 [Arabidopsis lyrata subsp.
lyrata]
gi|297314154|gb|EFH44577.1| hypothetical protein ARALYDRAFT_330113 [Arabidopsis lyrata subsp.
lyrata]
Length = 1057
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 172/447 (38%), Positives = 254/447 (56%), Gaps = 27/447 (6%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
+ ++ +++ Y KSG E ++ R +P++N+ +W LI+G Q+G + + MR
Sbjct: 107 NTISWTAMVSGYAKSGRKEEALELFRRLPVKNLYSWTALISGFVQSGKGLEAFSVFTEMR 166
Query: 65 MVGFRP-DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
D + S++ +C+ LA G+Q+H V+ G V + ++LI MY++C +
Sbjct: 167 RERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDV 226
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
+ F + DVV W+S+I HG+ E+A+ L+++M + N+VTFV L+YAC
Sbjct: 227 IAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDEMVSHGVKPNEVTFVGLIYAC 286
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
SH G KG E F M K Y +P L+HYTC++DLLGR G LDEA LI MP +
Sbjct: 287 SHVGFVAKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPT 346
Query: 244 WKTLLSACKTHKSTDMAGRIAEEIL-GVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMR 302
W LLSACK M RIA+ ++ P+D + Y+LLSNI+ASA W VSE R +
Sbjct: 347 WAALLSACKRQGQGQMGVRIADHLVSSFKPKDPSTYILLSNIYASASLWGKVSEARRKLG 406
Query: 303 ERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLR-GYVPDTGADM 361
+ V+K+PG S +E++ + F G+ SH +I L++L EM++R GYVPDT +
Sbjct: 407 DMEVRKDPGYSSVEVRKETEVFYAGETSHALKEDIFRLLKKLEEEMRIRNGYVPDTSWIL 466
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISE 402
HDMD +EKE L HSE+ A+A+ GL+ +P K+ISE
Sbjct: 467 HDMDEQEKEKLLFWHSERSAVAY-----GLLKAVPGTPIRIVKNLRVCGDCHVVLKHISE 521
Query: 403 IKNREIIVRDASRFHHFRNGKCSCGDY 429
I REIIVRDA+R+HHF+ GKCSC D+
Sbjct: 522 ITEREIIVRDATRYHHFKGGKCSCNDF 548
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 98/200 (49%), Gaps = 8/200 (4%)
Query: 32 MPIRNVIAWITLIAGKAQNGLAEDVL-DQYNLMRMVGFRPDKITFVSVISSCSELATLGQ 90
MP R+ IAW +++ Q L+ L ++ G RPD F +++ +C+ L ++
Sbjct: 1 MPHRDHIAWASVLTALNQANLSGKTLWVFSSVGSSSGLRPDDFVFSALVKACANLGSIKL 60
Query: 91 GQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGF 150
G+Q+H + + S D V SSL+ MY++C LD + F + + W++M++ Y
Sbjct: 61 GKQVHCHFIVSEYSNDDVVKSSLVDMYAKCRLLDCAKAVFDSIRVKNTISWTAMVSGYAK 120
Query: 151 HGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLE 210
G+ EEA+ LF ++ K N ++ +L+ G KG+E F + + R + +
Sbjct: 121 SGRKEEALELFRRLPVK----NLYSWTALISGFVQSG---KGLEAFSVFTEMRRERVDIL 173
Query: 211 HYTCVVDLLGRCGYLDEAAA 230
+ ++G C L + A
Sbjct: 174 DPLVLSSIVGACANLAASIA 193
>gi|225434804|ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic [Vitis vinifera]
Length = 658
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 167/446 (37%), Positives = 272/446 (60%), Gaps = 16/446 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE + ++L MY + G ++ +V MP++NV++W +IA ++NG + L+ +
Sbjct: 213 GFEGHVHIMTTLLDMYARFGCVLNASRVFDQMPVKNVVSWSAMIACYSKNGKPLEALELF 272
Query: 61 NLMRMVG--FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
M + P+ +T VSV+ +C+ LA L QG+ +H +++ G + V+S+L+++Y+
Sbjct: 273 RKMMLENQDLLPNSVTMVSVLQACAALAALEQGKLMHGYILRRGLDSILPVVSALVTVYA 332
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
RCG L+ + F E DVV W+S+I++YG HG G +AI +F++M + + ++FVS
Sbjct: 333 RCGNLELGHRVFERMEKRDVVSWNSLISSYGIHGFGRKAIQIFKEMIDQGLSPSPISFVS 392
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+L ACSH GL E+G F+ MV+ ++ P +EHY C+VDLLGR LDEAA +I +M ++
Sbjct: 393 VLGACSHAGLVEEGKVLFESMVRGHKIFPSVEHYACMVDLLGRANRLDEAAKIIDDMRIE 452
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
+W +LL +C+ H + ++A R + + P +A YVLL++I+A AK W V +
Sbjct: 453 PGPKVWGSLLGSCRIHCNVELAERATSRLFELEPTNAGNYVLLADIYAEAKMWNEVKRVK 512
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
+ R ++K PG S +EI+ +++ F D+ +P+ ++ L +L+ EMK +GYVPDT
Sbjct: 513 MLLEARGLQKVPGRSCIEIRRKIYSFMSVDEFNPQIEQLHALLLKLSMEMKEKGYVPDTK 572
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVMLP------------FKYISEIK 404
++D+D EEKE + HSEKLA+AF +G + + K+IS+
Sbjct: 573 VVLYDLDPEEKERIVLGHSEKLALAFGLINSKKGETIRITKNLRLCEDCHSVTKFISKFA 632
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
NREI+VRD +RFH F++G CSCGDYW
Sbjct: 633 NREILVRDVNRFHLFQDGVCSCGDYW 658
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 139/280 (49%), Gaps = 10/280 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + D + L +MY + S+ KV R + W L G +VLD Y
Sbjct: 108 GSDQDPFLATKLINMYSELDSIDNARKVFDKTRKRTIYVWNALFRALTLAGYGREVLDLY 167
Query: 61 NLMRMVGFRPDKITFVSVISSC----SELATLGQGQQIHAEVVKAGASLDVGVISSLISM 116
M +G D+ T+ V+ +C + ++ L G++IH +++ G V ++++L+ M
Sbjct: 168 RRMNRIGVPSDRFTYTYVLKACVASEAFVSLLLNGREIHGHILRHGFEGHVHIMTTLLDM 227
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM--EQKEFEANDV 174
Y+R GC+ ++ + F + +VV WS+MIA Y +GK EA+ LF +M E ++ N V
Sbjct: 228 YARFGCVLNASRVFDQMPVKNVVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLPNSV 287
Query: 175 TFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRN 234
T VS+L AC+ E+G ++++ L + +V + RCG L+ +
Sbjct: 288 TMVSVLQACAALAALEQGKLMHGYILRR-GLDSILPVVSALVTVYARCGNLELGHRVFER 346
Query: 235 MPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNP 272
M K + + W +L+S+ H A +I +E++ G++P
Sbjct: 347 ME-KRDVVSWNSLISSYGIHGFGRKAIQIFKEMIDQGLSP 385
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 101/212 (47%), Gaps = 12/212 (5%)
Query: 49 QNGLAEDVLDQYNLMRMVGF-----RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGA 103
N L + + Q NL + + P + T+ +I SC+ +L QG +H ++ G+
Sbjct: 50 NNPLIQSLCKQGNLNQALQVLSQEPNPTQHTYELLILSCTRQNSLPQGIDLHRHLIHDGS 109
Query: 104 SLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQ 163
D + + LI+MYS +D++ K F + + +W+++ A G G E ++L+ +
Sbjct: 110 DQDPFLATKLINMYSELDSIDNARKVFDKTRKRTIYVWNALFRALTLAGYGREVLDLYRR 169
Query: 164 MEQKEFEANDVTFVSLLYAC----SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLL 219
M + ++ T+ +L AC + L G E ++ ++ + + T ++D+
Sbjct: 170 MNRIGVPSDRFTYTYVLKACVASEAFVSLLLNGREIHGHIL-RHGFEGHVHIMTTLLDMY 228
Query: 220 GRCGYLDEAAALIRNMPVKANAIIWKTLLSAC 251
R G + A+ + MPVK N + W ++ AC
Sbjct: 229 ARFGCVLNASRVFDQMPVK-NVVSWSAMI-AC 258
>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 707
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 167/440 (37%), Positives = 261/440 (59%), Gaps = 16/440 (3%)
Query: 6 LVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRM 65
+VA + + + +G + + M R+ W +I + GL + L + M+
Sbjct: 269 IVACNEMILQFGLAGEMHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQR 328
Query: 66 VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD 125
G + + +SV+S C+ LA+L G+Q+HA +V++ D+ V S LI+MY +CG L
Sbjct: 329 EGVALNFPSMISVLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVR 388
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
+ F + DVV+W+SMI Y HG GEEA+N+F M + ++VTF+ +L ACS+
Sbjct: 389 AKGIFNRFLFKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSY 448
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
G ++G E F+ M Y+ +P +EHY C+VDLLGR G +DEA L+ MP++ +AI+W
Sbjct: 449 SGKVKEGFEIFEAMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWG 508
Query: 246 TLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERN 305
LL AC+ H D+A E++ + P++A PYVLLS+++A+ RW+ V R+ + R
Sbjct: 509 ALLGACRNHMKLDLAEVAVEKLAKLEPKNAGPYVLLSHMYATKGRWRDVEVLRKKI-NRR 567
Query: 306 VKKEPGVSWLEIKNQVHQFTMGD-KSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
V K PG SW+E++ +VH FT GD KSHP I LE+L+ ++ GY PD +HD+
Sbjct: 568 VIKFPGCSWIEVEKKVHMFTGGDSKSHPEQHMITQMLEKLSGFLREAGYCPDGSFVLHDV 627
Query: 365 DSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNREIIV 410
D EEK ++L +HSE+LA+A+ + G+ + + K I+++ REII+
Sbjct: 628 DEEEKTHSLGYHSERLAVAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIIL 687
Query: 411 RDASRFHHFRNGKCSCGDYW 430
RDA+RFHHF++G CSC D+W
Sbjct: 688 RDANRFHHFKDGSCSCKDFW 707
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 99/187 (52%), Gaps = 9/187 (4%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F+ DL S L MY+K G LV + + ++V+ W ++I G +Q+GL E+ L+ ++
Sbjct: 366 FDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMITGYSQHGLGEEALNVFH 425
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV--ISSLISMYSR 119
M G +PD++TF+ V+S+CS + +G +I E +K ++ G+ + ++ + R
Sbjct: 426 DMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIF-EAMKCTYQVEPGIEHYACMVDLLGR 484
Query: 120 CGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGK---GEEAINLFEQMEQKEFEANDVT 175
G +D++++ + D ++W +++ A H K E A+ ++E K A
Sbjct: 485 AGRVDEAMELVEKMPMEPDAIVWGALLGACRNHMKLDLAEVAVEKLAKLEPK--NAGPYV 542
Query: 176 FVSLLYA 182
+S +YA
Sbjct: 543 LLSHMYA 549
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 106/199 (53%), Gaps = 12/199 (6%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
+ V+ + + Y+K+G + + KV +MP RNV++W +++ G Q G+ E+ + M
Sbjct: 82 NTVSFNGMISGYVKNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEMP 141
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
R + +++ +I + + + +++ + + DV V++++I Y + G LD
Sbjct: 142 ----RRNVVSWTVMIGGLLKESRIDDAKKLFDMIPEK----DVVVVTNMIGGYCQVGRLD 193
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
++ + F E + +V W++M++ Y +G+ + A LFE M ++ N+V++ ++L +
Sbjct: 194 EARELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVMPER----NEVSWTAMLMGYT 249
Query: 185 HCGLKEKGMEFFDLMVKKY 203
G ++ E F+ M K+
Sbjct: 250 QSGRMKEAFELFEAMPVKW 268
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 16/159 (10%)
Query: 110 ISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEF 169
+ +IS Y + G + D+ K F +VV W+SM+ Y G EEA LF +M ++
Sbjct: 86 FNGMISGYVKNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEMPRR-- 143
Query: 170 EANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLG---RCGYLD 226
N V++ ++ + + FD++ +K V +++G + G LD
Sbjct: 144 --NVVSWTVMIGGLLKESRIDDAKKLFDMIPEK--------DVVVVTNMIGGYCQVGRLD 193
Query: 227 EAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAE 265
EA L M V+ N W T++S + D+A ++ E
Sbjct: 194 EARELFDEMKVR-NVFTWTTMVSGYAKNGRVDVARKLFE 231
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 90/201 (44%), Gaps = 21/201 (10%)
Query: 111 SSLISMYSRCGCLDDSVKTF--LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE 168
+S IS Y R G + ++ K F + W++M++AY K +A+ LF+QM Q+
Sbjct: 23 TSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQMPQR- 81
Query: 169 FEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEA 228
N V+F ++ G+ + FD+M ++ + +T +V + G ++EA
Sbjct: 82 ---NTVSFNGMISGYVKNGMVADARKVFDVMPER-----NVVSWTSMVRGYVQEGMVEEA 133
Query: 229 AALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNI---H 285
L MP + N + W ++ D A ++ + I P+ V+++N+ +
Sbjct: 134 EKLFWEMP-RRNVVSWTVMIGGLLKESRIDDAKKLFDMI----PEKDV--VVVTNMIGGY 186
Query: 286 ASAKRWQGVSEFREAMRERNV 306
R E + M+ RNV
Sbjct: 187 CQVGRLDEARELFDEMKVRNV 207
>gi|302822426|ref|XP_002992871.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
gi|300139319|gb|EFJ06062.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
Length = 716
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 178/458 (38%), Positives = 264/458 (57%), Gaps = 32/458 (6%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ ++V ++L MY K GS VE KV M RNVI+W ++IA AQ+G ++ L
Sbjct: 263 GFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEAL--- 319
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
NL + + P ++F S +++C+ L L +G++IH VV+A + + +SL+SMY+RC
Sbjct: 320 NLFKRMDVEPSGVSFSSALNACALLGALDEGREIHHRVVEANLA-SPQMETSLLSMYARC 378
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G LDD+ + F + D ++MIAA+ HG+ ++A+ ++ +MEQ+ A+ +TFVS+L
Sbjct: 379 GSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRKMEQEGIPADGITFVSVL 438
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH L +F +V + P +EHY C+VD+LGR G L +A L+ MP +A+
Sbjct: 439 VACSHTSLVADCRDFLQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQAD 498
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A+ W TLLS CK H D R A ++ + P + PYV LSN++A+AKR+ R+
Sbjct: 499 AVAWMTLLSGCKRHGDLDRGERAARKVFELAPAETLPYVFLSNMYAAAKRFDDARRVRKE 558
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHP------RSME-IDLYLEELTSEMKLRGY 353
M ER V + VS++EI N++H FT G + R+ME + L EL MK GY
Sbjct: 559 MEERGVTRPVAVSYIEIDNELHMFTSGGRDEQQEGHDGRTMERVRSLLVELLEPMKQAGY 618
Query: 354 VPDTGA---DMHDMDS-EEKEYNLKHHSEKLAIAFA-------EHTRGLIVM-------- 394
VPDT + + S EEK+ +L HSE+LAIA+ + +R L V+
Sbjct: 619 VPDTREVYLEQQGVTSEEEKQRSLCFHSERLAIAYGLIAAKDPDDSRPLRVVNSHRVCSG 678
Query: 395 --LPFKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
K +S+I + I VRD SRFHHF G CSCGD+W
Sbjct: 679 CHSAIKLLSDITEKRIFVRDGSRFHHFEKGACSCGDHW 716
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 137/260 (52%), Gaps = 7/260 (2%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D V SL +MY+K +VE KV M RNV ++ +I+ Q G + L+ ++ M
Sbjct: 165 DDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMS 224
Query: 65 MV-GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
V P+ TF +++ + L L +G+++H + G +V V ++L++MY +CG
Sbjct: 225 KVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSP 284
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
++ K F +V+ W+SMIAAY HG +EA+NLF++M + E + V+F S L AC
Sbjct: 285 VEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRM---DVEPSGVSFSSALNAC 341
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
+ G ++G E +V+ P++E T ++ + RCG LD+A + M + +A
Sbjct: 342 ALLGALDEGREIHHRVVEANLASPQME--TSLLSMYARCGSLDDARRVFNRMKTR-DAFS 398
Query: 244 WKTLLSACKTHKSTDMAGRI 263
+++A H A RI
Sbjct: 399 CNAMIAAFTQHGRKKQALRI 418
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 132/256 (51%), Gaps = 5/256 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D+ ++L MY K GSL + ++V M I+++ AW ++IA A+ G E + Y
Sbjct: 60 GFRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLY 119
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G P+ +TF + C+ +A L G+ IH ++ + D + SL++MY +C
Sbjct: 120 RRMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKC 179
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE-FEANDVTFVSL 179
+ ++ K F + +V +++MI+AY G+ EA+ LF +M + E E N TF ++
Sbjct: 180 DEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATI 239
Query: 180 LYACSHCGLKEKGMEFF-DLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
L A G EKG + L + + +++ +V + G+CG EA + +M +
Sbjct: 240 LGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQN--ALVTMYGKCGSPVEARKVFDSMTAR 297
Query: 239 ANAIIWKTLLSACKTH 254
N I W ++++A H
Sbjct: 298 -NVISWTSMIAAYAQH 312
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 80/142 (56%)
Query: 43 LIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAG 102
+IA + G L+ + M G DK S++++C++L L +G+++H ++ G
Sbjct: 1 MIAACVREGRPLQALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITG 60
Query: 103 ASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFE 162
D+ + ++L+ MY++CG LDD+ + F E D+ WSS+IAAY G+GE A+ L+
Sbjct: 61 FRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYR 120
Query: 163 QMEQKEFEANDVTFVSLLYACS 184
+M + E N VTF L C+
Sbjct: 121 RMIAEGVEPNVVTFACALGGCA 142
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 164/449 (36%), Positives = 255/449 (56%), Gaps = 24/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + +SL MY K G + K+ M R+V+AW +I+G AQ ++ L+ +
Sbjct: 252 GLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLF 311
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M+ P+++T VSV+ SC+ L G+ +H + K L V + + LI Y++C
Sbjct: 312 HEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKC 371
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +D SV+ F E + +V W+++I +G+G+ A+ F M + + + NDVTF+ +L
Sbjct: 372 GYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVL 431
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH L ++G F+ M + + +PR+EHY C+VD+LGR G+L+EA I NMP N
Sbjct: 432 SACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPN 491
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A++W+TLL++C+ HK+ +MA + E I + P + Y+LLSN +A R + R
Sbjct: 492 AVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSL 551
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
++E+ +KK PG S +E+ VH+F D H S EI L+++ ++K GYVP+T
Sbjct: 552 IKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMKQIKRLGYVPNTDDA 611
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
+ + E KE ++ HHSEKLAIA+ GLI P K+IS
Sbjct: 612 RLEAEEESKETSVSHHSEKLAIAY-----GLIRTSPRTTIRISKNLRMCRDCHNATKFIS 666
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
++ R IIVRD +RFHHF++G CSC DYW
Sbjct: 667 QVFERMIIVRDRNRFHHFKDGLCSCNDYW 695
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 159/314 (50%), Gaps = 6/314 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ + ++L MY G + V MP R+++AW ++++G +NGL ++V+ +
Sbjct: 151 GFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLF 210
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ + D +T +SV+ +C LA L G+ I +V G + + +SLI MY++C
Sbjct: 211 RKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKC 270
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +D + K F E + DVV WS+MI+ Y + +EA+NLF +M++ N+VT VS+L
Sbjct: 271 GQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVL 330
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
Y+C+ G E G ++ +KK + K + T ++D +CGY+D + + + M K N
Sbjct: 331 YSCAMLGAYETG-KWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFK-N 388
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
W L+ + MA +L V P D +LS + QG F
Sbjct: 389 VFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHLFN 448
Query: 299 EAMRERNVKKEPGV 312
R+ ++ EP +
Sbjct: 449 SMRRDFDI--EPRI 460
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 109/213 (51%), Gaps = 4/213 (1%)
Query: 39 AWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEV 98
A+ +I G A ++ L + M + DK TF SV+ +CS + L +G+Q+HA +
Sbjct: 88 AYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHALI 147
Query: 99 VKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAI 158
+K+G + V ++LI MY+ CG + + F +V W+SM++ Y +G +E +
Sbjct: 148 LKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVV 207
Query: 159 NLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKK-YRRKPRLEHYTCVVD 217
LF ++ + E +DVT +S+L AC E G + +V K RR L T ++D
Sbjct: 208 KLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLT--TSLID 265
Query: 218 LLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+ +CG +D A L M K + + W ++S
Sbjct: 266 MYAKCGQVDTARKLFDEMD-KRDVVAWSAMISG 297
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 81/179 (45%), Gaps = 4/179 (2%)
Query: 92 QQIHAEVVKAGASLDVGVISSLISMYSRC--GCLDDSVKTFLECEYSDVVLWSSMIAAYG 149
QQ+HA ++K LD + +++ + +D ++ F + + ++ MI
Sbjct: 38 QQVHAHLLKTRRLLDPIITEAVLESAALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLA 97
Query: 150 FHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRL 209
F + A+ LF++M +K + + TF S+L ACS +G + L++K +
Sbjct: 98 FKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHALILKSGFKSNEF 157
Query: 210 EHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL 268
T ++ + CG + A + MP ++ + W ++LS + D ++ +IL
Sbjct: 158 VENT-LIQMYANCGQIGVARHVFDGMPERS-IVAWNSMLSGYTKNGLWDEVVKLFRKIL 214
>gi|297814598|ref|XP_002875182.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321020|gb|EFH51441.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 163/450 (36%), Positives = 258/450 (57%), Gaps = 25/450 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + ++ +L +MY + + V + V+ + +I G A+ + L +
Sbjct: 161 GVDDNVYVCPTLINMYTECEDVDAARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLF 220
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ +P++IT +SV+SSC+ L +L G+ IH K G V V ++LI M+++C
Sbjct: 221 REMQGKNLKPNEITLLSVLSSCALLGSLDLGKWIHEYAKKHGFCKYVKVNTALIDMFAKC 280
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G LDD+V F Y D WS+MI AY HG+ E ++ +FE+M + + +++TF+ LL
Sbjct: 281 GSLDDAVSIFENMRYKDTQAWSAMIVAYANHGQAENSMLMFERMRSENVQPDEITFLGLL 340
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL E+G E+F MV ++ P ++HY +VDLLGR G+L++A I +P+
Sbjct: 341 NACSHTGLVEEGREYFSWMVHEFGIVPSIKHYGSMVDLLGRAGHLEDAYEFIDKLPISPT 400
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
++W+ LL+AC +H + ++A +++E IL ++ YV+LSN++A K+W+ V R+
Sbjct: 401 PMLWRILLAACSSHNNLELAEKVSERILELDDSHGGDYVILSNLYARNKKWEAVDSLRKV 460
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M++R K PG S +E+ N VH+F GD + ++ L+E+ E+KL GYVPDT
Sbjct: 461 MKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLAGYVPDTSMV 520
Query: 361 MH-DMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPFKYISEIKN-------------- 405
+H DM +EKE L++HSEKLAIAF GL+ P I +KN
Sbjct: 521 VHADMGDQEKEITLRYHSEKLAIAF-----GLLNTPPGTTIRVVKNLRVCRDCHSAAKLI 575
Query: 406 -----REIIVRDASRFHHFRNGKCSCGDYW 430
R++++RD RFHHF +GKCSC D+W
Sbjct: 576 SLIFGRKVVLRDVQRFHHFEDGKCSCRDFW 605
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 106/204 (51%), Gaps = 2/204 (0%)
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
PD TF S++ +C+ L +G+Q+H +K G +V V +LI+MY+ C +D +
Sbjct: 129 PDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGVDDNVYVCPTLINMYTECEDVDAARCV 188
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F VV +++MI Y + EA++LF +M+ K + N++T +S+L +C+ G
Sbjct: 189 FDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKNLKPNEITLLSVLSSCALLGSL 248
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
+ G ++ KK+ ++ T ++D+ +CG LD+A ++ NM K + W ++
Sbjct: 249 DLG-KWIHEYAKKHGFCKYVKVNTALIDMFAKCGSLDDAVSIFENMRYK-DTQAWSAMIV 306
Query: 250 ACKTHKSTDMAGRIAEEILGVNPQ 273
A H + + + E + N Q
Sbjct: 307 AYANHGQAENSMLMFERMRSENVQ 330
>gi|225432810|ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Vitis vinifera]
Length = 590
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 166/448 (37%), Positives = 263/448 (58%), Gaps = 22/448 (4%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNG--------LAEDV 56
D ++L + Y K G + + + ++ +W ++++ N L+ +V
Sbjct: 143 DPFVQAALLNYYAKCGKVGACRYLFNQISKPDLASWNSILSAYVHNSGAICEDVSLSLEV 202
Query: 57 LDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISM 116
L + M+ + +++T V++IS+C+EL L QG H V+K L+ V ++LI M
Sbjct: 203 LTLFIEMQKSLIKANEVTLVALISACAELGALSQGAWAHVYVLKHNLKLNHFVGTALIDM 262
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
YS+CGCLD + + F + + D + +++MI + HG G +A++LF++M + +DVT
Sbjct: 263 YSKCGCLDLACQLFDQLPHRDTLCYNAMIGGFAIHGYGHQALDLFKKMTLEGLAPDDVTL 322
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
V + +CSH GL E+G + F+ M + Y +P+LEHY C+VDLLGR G L EA + NMP
Sbjct: 323 VVTMCSCSHVGLVEEGCDVFESMKEVYGVEPKLEHYGCLVDLLGRAGRLREAEERVLNMP 382
Query: 237 VKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSE 296
+K NA+IW++LL A + H + ++ + + ++ + P+ + YVLLSN++AS RW V
Sbjct: 383 MKPNAVIWRSLLGAARVHGNLEIGEVVLKHLIQLEPETSGNYVLLSNMYASINRWDDVKR 442
Query: 297 FREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPD 356
R+ M++ + K PG S +E+ +H+F MGDK+HPRS EI L LEE++ + G+ P
Sbjct: 443 VRKLMKDHGINKVPGSSLVEVGGAMHEFLMGDKTHPRSKEIYLKLEEMSRRLHEYGHKPR 502
Query: 357 TGADMHDMDSEEKEYNLKHHSEKLAIAFA----EHTRGLIVMLPF----------KYISE 402
T + D++ EEKE L +HSE+LAIAFA H + ++ K IS+
Sbjct: 503 TLEVLFDIEEEEKEDALSYHSERLAIAFALIASHHCAPIRIIKNLRVCGDCHTSSKLISK 562
Query: 403 IKNREIIVRDASRFHHFRNGKCSCGDYW 430
I REIIVRD +RFHHF+ G CSC DYW
Sbjct: 563 IYEREIIVRDRNRFHHFKEGACSCSDYW 590
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 121/252 (48%), Gaps = 24/252 (9%)
Query: 68 FRPDKITFVSVISSCSELATLGQGQQIHAEVVK-AGASLDVGVISSLISMYSRCGCLDDS 126
+P+ TF S+ +C L G+ +H V+K + D V ++L++ Y++CG +
Sbjct: 104 LKPNGFTFPSLFKACGSQPWLRHGRALHTHVLKFLEPTCDPFVQAALLNYYAKCGKVGAC 163
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGE---------EAINLFEQMEQKEFEANDVTFV 177
F + D+ W+S+++AY H G E + LF +M++ +AN+VT V
Sbjct: 164 RYLFNQISKPDLASWNSILSAY-VHNSGAICEDVSLSLEVLTLFIEMQKSLIKANEVTLV 222
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY--TCVVDLLGRCGYLDEAAALIRNM 235
+L+ AC+ G +G + + V K+ K L H+ T ++D+ +CG LD A L +
Sbjct: 223 ALISACAELGALSQG-AWAHVYVLKHNLK--LNHFVGTALIDMYSKCGCLDLACQLFDQL 279
Query: 236 PVKANAIIWKTLLSACKT----HKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRW 291
P + + + + ++ H++ D+ ++ E G+ P D V + +
Sbjct: 280 PHR-DTLCYNAMIGGFAIHGYGHQALDLFKKMTLE--GLAPDDVTLVVTMCSCSHVGLVE 336
Query: 292 QGVSEFREAMRE 303
+G F E+M+E
Sbjct: 337 EGCDVF-ESMKE 347
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 84/185 (45%), Gaps = 3/185 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
+L+ G++L MY K G L ++ +P R+ + + +I G A +G LD +
Sbjct: 248 NLKLNHFVGTALIDMYSKCGCLDLACQLFDQLPHRDTLCYNAMIGGFAIHGYGHQALDLF 307
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSR 119
M + G PD +T V + SCS + + +G + + + G + L+ + R
Sbjct: 308 KKMTLEGLAPDDVTLVVTMCSCSHVGLVEEGCDVFESMKEVYGVEPKLEHYGCLVDLLGR 367
Query: 120 CGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEAN-DVTFV 177
G L ++ + L + V+W S++ A HG E + + + Q E E + + +
Sbjct: 368 AGRLREAEERVLNMPMKPNAVIWRSLLGAARVHGNLEIGEVVLKHLIQLEPETSGNYVLL 427
Query: 178 SLLYA 182
S +YA
Sbjct: 428 SNMYA 432
>gi|449437940|ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Cucumis sativus]
Length = 598
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 180/449 (40%), Positives = 257/449 (57%), Gaps = 25/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ D+ GSSL MY K G + + + MP RNV++W +I G AQ + L +
Sbjct: 156 GYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLF 215
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ + TF SVI CS L G+ IH +K V S+LIS+YS+C
Sbjct: 216 KQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKC 275
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ + + F E ++ LW+SM+ A H + LFE+M + N ++F+S+L
Sbjct: 276 GVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVL 335
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
YACSH GL EKG E+F LM + Y +P EHY +VDLLGR G L EA ++I+ MP++
Sbjct: 336 YACSHAGLVEKGREYFSLM-RDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPT 394
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+W LL+ C+ HK T+MA +A+ IL ++ + +VLLSN +A+A R++ + R+
Sbjct: 395 ESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKM 454
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
+R+R VKKE G+SW+E N+VH FT GD+SH + +EI LEEL EM+ GYV DT
Sbjct: 455 LRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFV 514
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPFKYISEIKN--------------- 405
+ +D EEK +++HSE+LAIAF GLI P + I +KN
Sbjct: 515 LRAVDGEEKNETIRYHSERLAIAF-----GLITFPPGRPIRVMKNLRVCGDCHAAIKFMS 569
Query: 406 ----REIIVRDASRFHHFRNGKCSCGDYW 430
R +IVRD +RFH F +GKCSCGDYW
Sbjct: 570 KCCGRVLIVRDNNRFHRFEDGKCSCGDYW 598
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 126/275 (45%), Gaps = 4/275 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + + +L ++Y K+ + +V P ++ W ++I+ AQN L +
Sbjct: 55 GLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFF 114
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G RPD + S +C L G+ +H VK G DV V SSL+ MY++C
Sbjct: 115 RRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKC 174
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + D+ F E +VV WS MI Y G EA+ LF+Q ++ + ND TF S++
Sbjct: 175 GEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVI 234
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
CS E G L +K + ++ L +CG ++ A + +P + N
Sbjct: 235 RVCSSSTFLELGKLIHGLCLKMSFDSSSFVG-SALISLYSKCGVIEGAYQVFDEIPTR-N 292
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQ 273
+W ++L AC H T + EE+ +G+ P
Sbjct: 293 LGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPN 327
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 81/195 (41%), Gaps = 16/195 (8%)
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
N + F + +++ S + +L QG Q+HA ++K G V +LI++YS+
Sbjct: 14 NPLNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKT 73
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
S++ F E WSS+I+A+ + A+ F +M +D + S
Sbjct: 74 QLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSAT 133
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC-------VVDLLGRCGYLDEAAALIR 233
AC + G L VK Y C +VD+ +CG + +A L
Sbjct: 134 KACGFLRRSDVGKSVHCLAVKT--------GYYCDVFVGSSLVDMYAKCGEIGDARHLFD 185
Query: 234 NMPVKANAIIWKTLL 248
MP + N + W ++
Sbjct: 186 EMPER-NVVSWSGMI 199
>gi|356528388|ref|XP_003532785.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Glycine max]
Length = 721
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 171/443 (38%), Positives = 254/443 (57%), Gaps = 14/443 (3%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
+ D +SL Y + +V + ++V+ W L+ G N + L+ +
Sbjct: 279 WHFDEFVSASLVTFYAGCKQMEAACRVFGEVVYKSVVIWTALLTGYGLNDKHREALEVFG 338
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M + P++ +F S ++SC L + +G+ IHA VK G V SL+ MYS+CG
Sbjct: 339 EMMRIDVVPNESSFTSALNSCCGLEDIERGKVIHAAAVKMGLESGGYVGGSLVVMYSKCG 398
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+ D+V F +VV W+S+I HG G A+ LF QM ++ + + +T LL
Sbjct: 399 YVSDAVYVFKGINEKNVVSWNSVIVGCAQHGCGMWALALFNQMLREGVDPDGITVTGLLS 458
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
ACSH G+ +K FF +K +EHYT +VD+LGRCG L+EA A++ +MP+KAN+
Sbjct: 459 ACSHSGMLQKARCFFRYFGQKRSVTLTIEHYTSMVDVLGRCGELEEAEAVVMSMPMKANS 518
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
++W LLSAC+ H + D+A R A +I + P +A YVLLSN++AS+ RW V+ R M
Sbjct: 519 MVWLALLSACRKHSNLDLAKRAANQIFEIEPDCSAAYVLLSNLYASSSRWAEVALIRRKM 578
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
+ V K+PG SWL +K Q H+F D+SHP + +I LE L ++K GYVPD +
Sbjct: 579 KHNGVVKKPGSSWLTLKGQKHKFLSADRSHPLAEKIYQKLEWLGVKLKELGYVPDQQFAL 638
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFAEHT----RGLIVML----------PFKYISEIKNRE 407
HD+++E+KE L +HSE+LAIAF + + VM K +++I +RE
Sbjct: 639 HDVETEQKEEMLSYHSERLAIAFGLLSTVEGSAITVMKNLRVCGDCHNAIKLMAKIVDRE 698
Query: 408 IIVRDASRFHHFRNGKCSCGDYW 430
I+VRD+SRFH F+NG CSCGDYW
Sbjct: 699 IVVRDSSRFHDFKNGICSCGDYW 721
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 148/307 (48%), Gaps = 9/307 (2%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ A +++ H Y +G + + ++ MP R+VI+W ++IAG NG +E L + M
Sbjct: 180 DVAAWNAMIHGYCSNGRVDDALQLFCQMPSRDVISWSSMIAGLDHNGKSEQALVLFRDMV 239
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGA-SLDVGVISSLISMYSRCGCL 123
G V +S+ +++ G QIH V K G D V +SL++ Y+ C +
Sbjct: 240 ASGVCLSSGVLVCGLSAAAKIPAWRVGIQIHCSVFKLGDWHFDEFVSASLVTFYAGCKQM 299
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
+ + + F E Y VV+W++++ YG + K EA+ +F +M + + N+ +F S L +C
Sbjct: 300 EAACRVFGEVVYKSVVIWTALLTGYGLNDKHREALEVFGEMMRIDVVPNESSFTSALNSC 359
Query: 184 SHCGLK--EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
CGL+ E+G VK + VV + +CGY+ +A + + + K N
Sbjct: 360 --CGLEDIERGKVIHAAAVKMGLESGGYVGGSLVV-MYSKCGYVSDAVYVFKGINEK-NV 415
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
+ W +++ C H A + ++L GV+P LLS S + FR
Sbjct: 416 VSWNSVIVGCAQHGCGMWALALFNQMLREGVDPDGITVTGLLSACSHSGMLQKARCFFRY 475
Query: 300 AMRERNV 306
++R+V
Sbjct: 476 FGQKRSV 482
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 104/253 (41%), Gaps = 35/253 (13%)
Query: 12 LAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPD 71
+ H Y ++ L E + R +P ++V++W ++I G G D++ L + R
Sbjct: 92 MLHAYAQNHRLREAIDLFRRIPFKDVVSWNSIIKGCLHCG---DIVTARKLFDEMPRR-- 146
Query: 72 KITFVSVISSCSELATLGQGQQIHAEVV---KAGASLDVGVISSLISMYSRCGCLDDSVK 128
T VS + L LG Q+ AE + DV +++I Y G +DD+++
Sbjct: 147 --TVVSWTTLVDGLLRLGIVQE--AETLFWAMEPMDRDVAAWNAMIHGYCSNGRVDDALQ 202
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS---- 184
F + DV+ WSSMIA +GK E+A+ LF M + V L A +
Sbjct: 203 LFCQMPSRDVISWSSMIAGLDHNGKSEQALVLFRDMVASGVCLSSGVLVCGLSAAAKIPA 262
Query: 185 -------HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
HC + + G FD V +V C + EAA + V
Sbjct: 263 WRVGIQIHCSVFKLGDWHFDEFVS-----------ASLVTFYAGCKQM-EAACRVFGEVV 310
Query: 238 KANAIIWKTLLSA 250
+ +IW LL+
Sbjct: 311 YKSVVIWTALLTG 323
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 88/187 (47%), Gaps = 3/187 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E G SL MY K G + + V + + +NV++W ++I G AQ+G L +
Sbjct: 379 GLESGGYVGGSLVVMYSKCGYVSDAVYVFKGINEKNVVSWNSVIVGCAQHGCGMWALALF 438
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEV-VKAGASLDVGVISSLISMYSR 119
N M G PD IT ++S+CS L + + K +L + +S++ + R
Sbjct: 439 NQMLREGVDPDGITVTGLLSACSHSGMLQKARCFFRYFGQKRSVTLTIEHYTSMVDVLGR 498
Query: 120 CGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDV-TFV 177
CG L+++ + ++ ++W ++++A H + A Q+ + E + + +
Sbjct: 499 CGELEEAEAVVMSMPMKANSMVWLALLSACRKHSNLDLAKRAANQIFEIEPDCSAAYVLL 558
Query: 178 SLLYACS 184
S LYA S
Sbjct: 559 SNLYASS 565
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 10/127 (7%)
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
LD++ F + V L++ M+ AY + + EAI+LF ++ K+ V++ S++
Sbjct: 71 LDEARAIFDQIPTPHVSLYTIMLHAYAQNHRLREAIDLFRRIPFKDV----VSWNSIIKG 126
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM-PVKANA 241
C HCG + FD M ++ + +T +VD L R G + EA L M P+ +
Sbjct: 127 CLHCGDIVTARKLFDEMPRR-----TVVSWTTLVDGLLRLGIVQEAETLFWAMEPMDRDV 181
Query: 242 IIWKTLL 248
W ++
Sbjct: 182 AAWNAMI 188
>gi|297737088|emb|CBI26289.3| unnamed protein product [Vitis vinifera]
Length = 668
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 173/451 (38%), Positives = 261/451 (57%), Gaps = 30/451 (6%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
L+ V ++L MYMK G++ +++ RN++ + T+++ A+ GLA + L + M
Sbjct: 224 LNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEM 283
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQ-----IHAEVVKAGASLDVGVISSLISMYS 118
G RPD++T +S IS+ ++L L G+ +H + K G D+ + ++L+ M++
Sbjct: 284 LQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYWVHTYIEKNGIPCDMRLNTALVDMFA 343
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
RCG +++ F + DV W++ I G GE A LF QM + + + V FV
Sbjct: 344 RCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQ 403
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+L ACSH G E+G+ F LM + + P++EHY C+VDLLGR G L EA LI++MP++
Sbjct: 404 VLTACSHGGQVEQGLHIFSLM-EDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPME 462
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
N ++W +LL+AC+ HK+ +MA AE I + PQ A +VLLSNI+ASA +W V+ R
Sbjct: 463 PNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGKWTDVARVR 522
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
+RE+ V+K PG S +++ +H+FT GD+SHP I L L+E+ G++PD
Sbjct: 523 LNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQEMNCRFSDAGHIPDLS 582
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVM---LPFKYISEIK----------- 404
+ D+D +EKEY L HSEKLAIAF GLI +P + + ++
Sbjct: 583 NVLLDVDEQEKEYLLSRHSEKLAIAF-----GLIATGRSMPIRVVKNLRMCSDCHSFAKM 637
Query: 405 -----NREIIVRDASRFHHFRNGKCSCGDYW 430
NREIIVRD +RFH FR G CSC DYW
Sbjct: 638 ASIIYNREIIVRDNNRFHFFRQGLCSCCDYW 668
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 11/209 (5%)
Query: 42 TLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA 101
+LI G + GL + + Y M ++G P+ TF V+S C+++A +G Q+H VVK
Sbjct: 101 SLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVKM 160
Query: 102 GASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLF 161
G DV + + LI Y+ CG +D K F +VV W+S+I Y + +EA++LF
Sbjct: 161 GLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSLF 220
Query: 162 EQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGR 221
+M N V +L+ CG + FD V + L Y ++ R
Sbjct: 221 FEM------LNKVMVNALVDMYMKCGAIDAAKRLFDECVDR-----NLVLYNTILSNYAR 269
Query: 222 CGYLDEAAALIRNMPVKANAIIWKTLLSA 250
G EA A++ M + T+LSA
Sbjct: 270 QGLAREALAILDEMLQQGPRPDRVTMLSA 298
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 100/239 (41%), Gaps = 45/239 (18%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E D+ + L H Y + G + G KV M RNV++W +LI G A+
Sbjct: 161 GLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYAR----------- 209
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
G RP + +S E+ L+ ++++L+ MY +C
Sbjct: 210 ------GDRPKE-----AVSLFFEM-------------------LNKVMVNALVDMYMKC 239
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +D + + F EC ++VL++++++ Y G EA+ + ++M Q+ + VT +S +
Sbjct: 240 GAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAI 299
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKP----RLEHYTCVVDLLGRCGYLDEAAALIRNM 235
A + G V Y K + T +VD+ RCG A + M
Sbjct: 300 SASAQLVDLFYGKVCHGYWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKM 358
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 75/168 (44%), Gaps = 3/168 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D+ ++L M+ + G +V M R+V AW I A G E +
Sbjct: 327 GIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLF 386
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
N M + G +PD + FV V+++CS + QG I + + G S + ++ + R
Sbjct: 387 NQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLMEDHGISPQIEHYGCMVDLLGRA 446
Query: 121 GCLDDSVKTF--LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQ 166
G L ++ + E +DVV W S++AA H E A E++ +
Sbjct: 447 GLLREAFDLIKSMPMEPNDVV-WGSLLAACRVHKNVEMATYAAERINE 493
>gi|222622013|gb|EEE56145.1| hypothetical protein OsJ_05030 [Oryza sativa Japonica Group]
Length = 742
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 160/406 (39%), Positives = 243/406 (59%), Gaps = 8/406 (1%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
+E ++ GS+L MY K S+ E V R M RN+I+W +I G QN +E+ + ++
Sbjct: 309 YEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFS 368
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M+M G +PD T SVISSC+ LA+L +G Q H + +G + V ++L+++Y +CG
Sbjct: 369 EMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCG 428
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
++D+ + F E + D V W++++ Y GK +E I+LFE+M + + VTF+ +L
Sbjct: 429 SIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLS 488
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
ACS GL EKG ++FD M K + P +HYTC++DL R G EA I+ MP +A
Sbjct: 489 ACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDA 548
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
W TLLS+C+ + ++ AE +L +PQ+ A YVLL ++HA+ +W V+ R M
Sbjct: 549 FGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGM 608
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
R+R VKKEPG SW++ KN+VH F+ D+SHP S I LE L S+M GY PD + +
Sbjct: 609 RDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKMAEEGYKPDVSSVL 668
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVM---LPFKYISEIK 404
HD+ +K + + HHSEKLAIAF GLI + +P + + ++
Sbjct: 669 HDVADADKVHMISHHSEKLAIAF-----GLIFVPQEMPIRIVKNLR 709
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 122/228 (53%), Gaps = 4/228 (1%)
Query: 24 EGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCS 83
+ + + +LM R+ I W T++ G QNGL + LD + MR G D+ TF S++++C
Sbjct: 230 DAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACG 289
Query: 84 ELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSS 143
LA L +G+QIHA + + +V V S+L+ MYS+C + + F +++ W++
Sbjct: 290 ALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTA 349
Query: 144 MIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDL-MVKK 202
MI YG + EEA+ F +M+ + +D T S++ +C++ E+G +F L +V
Sbjct: 350 MIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSG 409
Query: 203 YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
R + + +V L G+CG +++A L M + + W L++
Sbjct: 410 LMRYITVSN--ALVTLYGKCGSIEDAHRLFDEMSFH-DQVSWTALVTG 454
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 127/299 (42%), Gaps = 40/299 (13%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN-LMRMVGF 68
S+LAH S + + E++ MP R+ +++ LI G + G + Y L+R
Sbjct: 87 SALAH----SRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESV 142
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
RP +IT ++I S L+ G +H +V++ G V S L+ MY++ G + D+ +
Sbjct: 143 RPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARR 202
Query: 129 TFLECEYSDVVL-------------------------------WSSMIAAYGFHGKGEEA 157
F E E VV+ W++M+ +G EA
Sbjct: 203 VFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEA 262
Query: 158 INLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVD 217
+++F +M + + TF S+L AC E+G + + + + + +VD
Sbjct: 263 LDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVG-SALVD 321
Query: 218 LLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQD 274
+ +C + A A+ R M + N I W ++ + ++ A R E+ G+ P D
Sbjct: 322 MYSKCRSIRLAEAVFRRMTCR-NIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDD 379
>gi|297819366|ref|XP_002877566.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323404|gb|EFH53825.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 591
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 164/454 (36%), Positives = 266/454 (58%), Gaps = 29/454 (6%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D + ++L +Y + + KV +P R+ ++W LI+ +N DVL +
Sbjct: 143 GFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPQRDTVSWNVLISCYLRNKRTRDVLVLF 202
Query: 61 NLMRM---VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMY 117
+ M+ +PD +T + + +C+ L L G+Q+H + + G S + + ++L+SMY
Sbjct: 203 DKMKNDVDRCVKPDNVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMY 262
Query: 118 SRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
SRCG +D + + F +VV W++MI+ +G G+EAI F +M + + T
Sbjct: 263 SRCGSMDKAYEVFNRMRERNVVSWTAMISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLT 322
Query: 178 SLLYACSHCGLKEKGMEFFDLMVK-KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
LL ACSH GL ++GM FFD M +++ KP L HY C+VDLLGR LD+A +LI++M
Sbjct: 323 GLLSACSHSGLVDEGMMFFDRMRSGEFKIKPNLHHYGCIVDLLGRARLLDKAYSLIKSME 382
Query: 237 VKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSE 296
+K ++ IW+TLL AC+ H + ++ R+ ++ ++A YVLL N ++S +W+ V+E
Sbjct: 383 MKPDSTIWRTLLGACRVHGNVELGERVIAHLIEFKAEEAGDYVLLLNTYSSVGKWEKVTE 442
Query: 297 FREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPD 356
R M+++ ++ PG S +E++ VH+F + D SHPR EI L E+ ++K+ GYV +
Sbjct: 443 LRSLMKKKRIQTNPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGYVAE 502
Query: 357 TGADMHDMDS-EEKEYNLKHHSEKLAIAFAEHTRGLIVMLP------------------- 396
+++H++DS EEK Y L++HSEKLAIAF G++V P
Sbjct: 503 ITSELHNLDSEEEKGYALRYHSEKLAIAF-----GILVTPPETTIRVTKNLRTCVDCHNF 557
Query: 397 FKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
K++S++ +R +IVRD SRFHHF+ G CSC D+W
Sbjct: 558 AKFVSDVYDRVVIVRDRSRFHHFKGGSCSCNDFW 591
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 117/256 (45%), Gaps = 8/256 (3%)
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
L R + F + ++ + C + L G QIH ++ G D ++++L+ +YS C
Sbjct: 103 LRRNISFPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCE 162
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQ---KEFEANDVTFVS 178
D+ K F E D V W+ +I+ Y + + + + LF++M+ + + ++VT +
Sbjct: 163 NSTDACKVFDEIPQRDTVSWNVLISCYLRNKRTRDVLVLFDKMKNDVDRCVKPDNVTCLL 222
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
L AC++ G + G + D + + L +V + RCG +D+A + M +
Sbjct: 223 ALQACANLGALDFGKQVHDF-IDENGLSGALNLSNTLVSMYSRCGSMDKAYEVFNRMRER 281
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSE 296
N + W ++S + A E+L G++P++ LLS S +G+
Sbjct: 282 -NVVSWTAMISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVDEGMM- 339
Query: 297 FREAMRERNVKKEPGV 312
F + MR K +P +
Sbjct: 340 FFDRMRSGEFKIKPNL 355
>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 760
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 151/409 (36%), Positives = 248/409 (60%), Gaps = 14/409 (3%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
NV++W ++IAG AQNG + L+ + M++ G +P+ +T S++ +C +A LG G+ H
Sbjct: 352 NVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTH 411
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGE 155
V+ +V V S+LI MY++CG ++ S F ++V W+S++ + HGK +
Sbjct: 412 GFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAK 471
Query: 156 EAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV 215
E +++FE + + + + ++F SLL AC GL ++G ++F +M ++Y KPRLEHY+C+
Sbjct: 472 EVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCM 531
Query: 216 VDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDA 275
V+LLGR G L EA LI+ MP + ++ +W LL++C+ + D+A AE++ + P++
Sbjct: 532 VNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENP 591
Query: 276 APYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSM 335
YVLLSNI+A+ W V R M +KK PG SW+++KN+V+ GDKSHP+
Sbjct: 592 GTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQID 651
Query: 336 EIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFA---------- 385
+I ++E++ EM+ G+ P+ +HD++ +E+E L HSEKLA+ F
Sbjct: 652 QITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPL 711
Query: 386 EHTRGLIVM----LPFKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+ + L + K+IS REI +RD +RFHHF++G CSCGD+W
Sbjct: 712 QVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 137/303 (45%), Gaps = 41/303 (13%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIR----NVIAWITLIAGKAQNGLAEDVLDQY 60
D+V S+L Y + G L E +++ M N+++W +++G ++G ++ + +
Sbjct: 181 DVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMF 240
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMY--- 117
+ +GF PD++T SV+ S + L G+ IH V+K G D VIS++I MY
Sbjct: 241 QKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKS 300
Query: 118 ----------------------------SRCGCLDDSVKTF-LECEYS---DVVLWSSMI 145
SR G +D +++ F L E + +VV W+S+I
Sbjct: 301 GHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSII 360
Query: 146 AAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRR 205
A +GK EA+ LF +M+ + N VT S+L AC + G V+ +
Sbjct: 361 AGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLL 420
Query: 206 KPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAE 265
+ + ++D+ +CG ++ + + MP K N + W +L++ H I E
Sbjct: 421 D-NVHVGSALIDMYAKCGRINLSQIVFNMMPTK-NLVCWNSLMNGFSMHGKAKEVMSIFE 478
Query: 266 EIL 268
++
Sbjct: 479 SLM 481
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 88/196 (44%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + D + L Y + + V++ +P + ++ +LI + L + +
Sbjct: 45 GAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVF 104
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M G PD ++ C+EL+ G+QIH +G +D V S+ MY RC
Sbjct: 105 SRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRC 164
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + D+ K F DVV S+++ AY G EE + + +ME EAN V++ +L
Sbjct: 165 GRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGIL 224
Query: 181 YACSHCGLKEKGMEFF 196
+ G ++ + F
Sbjct: 225 SGFNRSGYHKEAVVMF 240
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 81/175 (46%), Gaps = 33/175 (18%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
GS+L MY K G + + V +MP +N++ W +L+ G + +G A++V+ + +
Sbjct: 426 GSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRL 485
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
+PD I+F S++S+C ++ +G + Y + + +K
Sbjct: 486 KPDFISFTSLLSACGQVGLTDEGWK-----------------------YFKMMSEEYGIK 522
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
LE +S M+ G GK +EA +L ++M FE + + +LL +C
Sbjct: 523 PRLE-------HYSCMVNLLGRAGKLQEAYDLIKEM---PFEPDSCVWGALLNSC 567
>gi|297795617|ref|XP_002865693.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311528|gb|EFH41952.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 640
Score = 318 bits (815), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 170/435 (39%), Positives = 259/435 (59%), Gaps = 25/435 (5%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRM-VGFRPDKIT 74
YM+ G + M R+V++W T+I+G +QNG +D ++ + M+ RP+ +T
Sbjct: 211 YMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSQNGFFKDAVEVFREMKKGEDIRPNYVT 270
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
VSV+ + S L +L G+ +H +G +D + S+LI MYS+CG ++ ++ F
Sbjct: 271 LVSVLPAVSRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIMVFERLP 330
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGME 194
+V+ WS+MI + HG+ +AI+ F +M Q +DV +++LL ACSH GL E+G
Sbjct: 331 RENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHAGLVEEGRR 390
Query: 195 FFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
+F MV +PR+EHY C+VDLLGR G LDEA I NMP+K + +IWK LL AC+ H
Sbjct: 391 YFSQMVSVDGLEPRIEHYGCMVDLLGRLGLLDEAEEFILNMPIKPDDVIWKALLGACRMH 450
Query: 255 KSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSW 314
++ +M R+A ++ + P D+ YV LSN++AS W VSE R M+E +++K+PG SW
Sbjct: 451 RNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEMDIRKDPGCSW 510
Query: 315 LEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLK 374
++I +H+F + D SHPR+ EI+ L E++ +++L GY P T + +++ E+KE L
Sbjct: 511 IDIDGVLHEFLVEDDSHPRAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENALH 570
Query: 375 HHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREIIVRDASR 415
+HSEK+A AF GLI P K IS++ R+I VRD R
Sbjct: 571 YHSEKMATAF-----GLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKR 625
Query: 416 FHHFRNGKCSCGDYW 430
FHHF++G CSC DYW
Sbjct: 626 FHHFQDGSCSCMDYW 640
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 136/309 (44%), Gaps = 57/309 (18%)
Query: 27 KVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVG---FRPDKITFVSVISSCS 83
K+ MP RN +W T+I G +++ + ++ M+ P++ TF SV+ +C+
Sbjct: 73 KIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFCEMMSDEFIEPNRFTFPSVLKACA 132
Query: 84 ELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFL------------ 131
+ + QG+QIH +K G D V+S+L+ MY CG + D+ F
Sbjct: 133 KTGKIQQGKQIHGLALKYGFGGDEFVMSNLVRMYVICGLMKDACVLFYKNIIEREMVMMI 192
Query: 132 -----------------------ECEYS----------DVVLWSSMIAAYGFHGKGEEAI 158
+C+ + VV W++MI+ Y +G ++A+
Sbjct: 193 DRRKRDGEVVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSQNGFFKDAV 252
Query: 159 NLFEQMEQKE-FEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVD 217
+F +M++ E N VT VS+L A S G E G E+ L + + + ++D
Sbjct: 253 EVFREMKKGEDIRPNYVTLVSVLPAVSRLGSLELG-EWLHLYAEDSGIRIDDVLGSALID 311
Query: 218 LLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH----KSTDMAGRIAEEILGVNPQ 273
+ +CG +++A + +P + N I W +++ H + D ++ + GV P
Sbjct: 312 MYSKCGIIEKAIMVFERLP-RENVITWSAMINGFAIHGQAGDAIDCFCKMRQA--GVRPS 368
Query: 274 DAAPYVLLS 282
D A LL+
Sbjct: 369 DVAYINLLT 377
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 56/99 (56%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +D V GS+L MY K G + + V +P NVI W +I G A +G A D +D +
Sbjct: 298 GIRIDDVLGSALIDMYSKCGIIEKAIMVFERLPRENVITWSAMINGFAIHGQAGDAIDCF 357
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVV 99
MR G RP + +++++++CS + +G++ +++V
Sbjct: 358 CKMRQAGVRPSDVAYINLLTACSHAGLVEEGRRYFSQMV 396
>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 745
Score = 318 bits (815), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 172/449 (38%), Positives = 251/449 (55%), Gaps = 44/449 (9%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF + L ++L MY K G + + + ++V W LI+ A + V + +
Sbjct: 322 GFGMSLALVTALIDMYGKCGQVGYARALFNGVKKKDVKIWSVLISAYAHVSCMDQVFNLF 381
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M +P+ +T VS++S C+E L G+ HA + + G +DV + ++LI+MY++C
Sbjct: 382 VEMLNNDVKPNNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVDVILETALINMYAKC 441
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + F E D+ +W++M+A + HG G+EA+ LF +ME E ND+TFVS+
Sbjct: 442 GDVTIARSLFNEAMQRDIRMWNTMMAGFSMHGCGKEALELFSEMESHGVEPNDITFVSIF 501
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
+ACSH GL +EHY C+VDLLGR G+LDEA +I NMP++ N
Sbjct: 502 HACSHSGL--------------------MEHYGCLVDLLGRAGHLDEAHNIIENMPMRPN 541
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
IIW LL+ACK HK+ + A +IL ++PQ+ VL SNI+ASAKRW V+ REA
Sbjct: 542 TIIWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWNDVTSVREA 601
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M +KKEPG+SW+E+ VH F GDK+ ++ ++ + E+ +++ GY P+T A
Sbjct: 602 MSHSGMKKEPGLSWIEVSGSVHHFKSGDKACTQTTKVYEMVTEMCIKLRESGYTPNTAAV 661
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
+ ++D EEKE L +HSEKLA AF GLI P K +S
Sbjct: 662 LLNIDEEEKESALSYHSEKLATAF-----GLISTAPGTPIRIVKNLRICDDCHAATKLLS 716
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+I R IIVRD +RFHHF G CSC YW
Sbjct: 717 KIYGRTIIVRDRNRFHHFSEGYCSCMGYW 745
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 142/274 (51%), Gaps = 4/274 (1%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
++++ ++L MY K G L +++ + R+V++W +IAG ++ ++ +N
Sbjct: 223 KMEVSMTTALIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNR 282
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M P++IT +S+I+ C + TL G+ HA +++ G + + ++++LI MY +CG
Sbjct: 283 MLEEKLFPNEITLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQ 342
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
+ + F + DV +WS +I+AY ++ NLF +M + + N+VT VSLL
Sbjct: 343 VGYARALFNGVKKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSL 402
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
C+ G + G ++ + ++ + + T ++++ +CG + A +L N ++ +
Sbjct: 403 CAEAGALDLG-KWTHAYINRHGLEVDVILETALINMYAKCGDVTIARSLF-NEAMQRDIR 460
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQD 274
+W T+++ H A + E+ GV P D
Sbjct: 461 MWNTMMAGFSMHGCGKEALELFSEMESHGVEPND 494
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 134/286 (46%), Gaps = 6/286 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D+ ++L +MY K G LV V MP R+V++W T++ ++ + L
Sbjct: 118 GFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEALRLV 177
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVK--AGASLDVGVISSLISMYS 118
M+ VG + + +S+I+ L + G+ +H +V+ ++V + ++LI MY
Sbjct: 178 REMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALIDMYC 237
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+ GCL + + F VV W+ MIA + +E F +M +++ N++T +S
Sbjct: 238 KGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEITLLS 297
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
L+ C G + G ++F + + L T ++D+ G+CG + A AL + K
Sbjct: 298 LITECGFVGTLDLG-KWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVK-K 355
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILG--VNPQDAAPYVLLS 282
+ IW L+SA D + E+L V P + LLS
Sbjct: 356 KDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLS 401
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 96/211 (45%), Gaps = 3/211 (1%)
Query: 43 LIAGKAQNGLAEDVLDQYNLMRMVGFRP-DKITFVSVISSCSELATLGQGQQIHAEVVKA 101
LI+ N L + + Y MR D S++ +C++ ++ G+++H K
Sbjct: 58 LISSYTNNHLPQASFNCYLHMRSNDAAALDNFILPSLLKACAQASSGDLGRELHGFAQKN 117
Query: 102 GASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLF 161
G + DV V ++L++MY +CGCL + F + DVV W++M+ Y EA+ L
Sbjct: 118 GFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEALRLV 177
Query: 162 EQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKY-RRKPRLEHYTCVVDLLG 220
+M+ + + V +SL+ + + G +V+ K + T ++D+
Sbjct: 178 REMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALIDMYC 237
Query: 221 RCGYLDEAAALIRNMPVKANAIIWKTLLSAC 251
+ G L A L + K + + W +++ C
Sbjct: 238 KGGCLASAQRLFDRLS-KRSVVSWTVMIAGC 267
>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
Length = 687
Score = 318 bits (815), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 173/433 (39%), Positives = 253/433 (58%), Gaps = 14/433 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G DL AG+SL MY K+G + + + M +++ +++ L++G QNG AE+ +
Sbjct: 255 GVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVF 314
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ PD T VS+I +CS LA L G+ H V+ G + + + ++LI MY++C
Sbjct: 315 KKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKC 374
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +D S + F D+V W++MIA YG HG G+EA LF +M F + VTF+ LL
Sbjct: 375 GRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLL 434
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL +G +F +M Y PR+EHY C+VDLL R G+LDEA I++MP++A+
Sbjct: 435 SACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRAD 494
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+W LL AC+ +K+ D+ +++ I + P+ +VLLSNI+++A R+ +E R
Sbjct: 495 VRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRII 554
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
+ + KK PG SW+EI +H F GD+SHP+S EI L+ + +K GY PDT
Sbjct: 555 QKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFV 614
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEH----------TRGLIVM----LPFKYISEIKNR 406
+ D++ EEKE L HSEKLAIA+ T+ L V K+IS +K R
Sbjct: 615 LQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHISLVKRR 674
Query: 407 EIIVRDASRFHHF 419
IIVRDA+RFHHF
Sbjct: 675 AIIVRDANRFHHF 687
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 134/280 (47%), Gaps = 11/280 (3%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G++L MY K GSL+ +V MP RN + W LI G + M G
Sbjct: 161 GTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGL 220
Query: 69 ---RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD 125
P I S + +C+ L L G+Q+HA + K+G D+ +SL+SMY++ G +D
Sbjct: 221 CFLSPTSIA--SALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQ 278
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
++ F E D V +S++++ Y +G+ EEA +F++M+ E + T VSL+ ACSH
Sbjct: 279 AIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSH 338
Query: 186 CGLKEKG-MEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
+ G ++++ + + ++D+ +CG +D + + MP + + + W
Sbjct: 339 LAALQHGRCSHGSVIIRGLASETSI--CNALIDMYAKCGRIDLSRQVFNMMPSR-DIVSW 395
Query: 245 KTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLS 282
T+++ H A + E+ LG P LLS
Sbjct: 396 NTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLS 435
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 135/295 (45%), Gaps = 16/295 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + DL ++L MY+K L + + MP R+++AW ++AG A +G+ +
Sbjct: 40 GLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHL 99
Query: 61 --NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA--------GASLDVGVI 110
M+M RP+ T V+++ ++ L QG +HA ++A + L GV+
Sbjct: 100 LSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVL 159
Query: 111 --SSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM-EQK 167
++L+ MY++CG L + + F + V WS++I + + +A LF+ M Q
Sbjct: 160 LGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQG 219
Query: 168 EFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDE 227
+ + S L AC+ G + L+ K L ++ + + G +D+
Sbjct: 220 LCFLSPTSIASALRACASLDHLRMGEQLHALLAKS-GVHADLTAGNSLLSMYAKAGLIDQ 278
Query: 228 AAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQ-DAAPYVLL 281
A AL M VK + + + L+S + + A + +++ N + DAA V L
Sbjct: 279 AIALFDEMAVK-DTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSL 332
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 83/190 (43%), Gaps = 12/190 (6%)
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P+ TF + +CS LA G+ IH + AG D+ V ++L+ MY +C CL D+
Sbjct: 8 PNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHI 67
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAIN--LFEQMEQKEFEANDVTFVSLLYACSHCG 187
F D+V W++M+A Y HG A+ L QM+ N T V+LL + G
Sbjct: 68 FATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQG 127
Query: 188 LKEKGMEFFDLMVKKYRRKPRLEHY---------TCVVDLLGRCGYLDEAAALIRNMPVK 238
+G ++ R T ++D+ +CG L A + MP +
Sbjct: 128 ALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPAR 187
Query: 239 ANAIIWKTLL 248
N + W L+
Sbjct: 188 -NEVTWSALI 196
>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
Length = 1058
Score = 318 bits (815), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 175/443 (39%), Positives = 267/443 (60%), Gaps = 18/443 (4%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMP-IRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
D V ++L Y KSG + E + M R+ I+W ++I+G NG ++ +D LM
Sbjct: 617 DNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNGNLQEAMDCVWLM 676
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
G D TF ++++C+ +A L +G ++HA +++ DV V S+L+ MYS+CG +
Sbjct: 677 IHSGQIMDCCTFSIILNACASVAALERGMELHAFGIRSHLESDVVVESALVDMYSKCGRV 736
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
D + K F + W+SMI+ Y HG G +AI +FE+M + + VTFVS+L AC
Sbjct: 737 DYASKLFNSMTQRNEFSWNSMISGYARHGLGRKAIEIFEEMLRSRESPDHVTFVSVLSAC 796
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
SH GL E+G+E+F++M + P++EHY+CV+DLLGR G +D+ I+ MP++ NA+I
Sbjct: 797 SHAGLVERGLEYFEMM-PDHGILPQIEHYSCVIDLLGRAGKIDKIKEYIQRMPIEPNALI 855
Query: 244 WKTLLSACKTHK---STDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
W+T+L AC+ K + D+ + +L + PQ+ YVL SN HA+ W+ ++ R A
Sbjct: 856 WRTVLVACRQSKDGSNIDLGREASRVLLEIEPQNPVNYVLASNFHAATGMWEDTAKARTA 915
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
MR+ KKE G SW+ + + VH F GD+SHP + EI L L ++ GYVP T
Sbjct: 916 MRQATEKKEAGRSWVTLNDGVHTFIAGDRSHPNTKEIYEKLNFLIQNIRNAGYVPLTEYA 975
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAF--AEHTRGLIVML-----------PFKYISEIKNRE 407
++D++ E KE L +HSEKLAIAF + G I ++ F+YIS++ +R+
Sbjct: 976 LYDLEEENKEELLSYHSEKLAIAFVLTRSSSGPIRIMKNLRVCGDCHIAFRYISQMISRQ 1035
Query: 408 IIVRDASRFHHFRNGKCSCGDYW 430
II+RD+ RFHHF++GKCSCGDYW
Sbjct: 1036 IILRDSIRFHHFKDGKCSCGDYW 1058
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 118/249 (47%), Gaps = 2/249 (0%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
+L + + L +MY K G++ K+ +LM + I+W T+I+ QNG E+ + Y+L
Sbjct: 412 DLKIAVSNGLVNMYAKCGAIESASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSL 471
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
MR P +S +SSC+ L L GQQ+H + VK G LD V + L+ MY CG
Sbjct: 472 MRQSCISPSNFALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGA 531
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKG-EEAINLFEQMEQKEFEANDVTFVSLLY 181
+ D K F D V W++M+ E + +F M + N VTF++LL
Sbjct: 532 MSDYWKVFNSMAEHDEVSWNTMMGVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLA 591
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
A S + E G + ++K + + ++ + G + L NM + +A
Sbjct: 592 ALSPLSVLELGKQVHAAVMKHGVMEDNVVD-NALISCYAKSGDMGSCEHLFTNMSDRRDA 650
Query: 242 IIWKTLLSA 250
I W +++S
Sbjct: 651 ISWNSMISG 659
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 138/271 (50%), Gaps = 6/271 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITL--IAGKAQNGLAEDVLD 58
G +LD + L MY + G++ + KV M + ++W T+ + +Q ++E V
Sbjct: 511 GLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMMGVMASSQTPISEIVKV 570
Query: 59 QYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
N+MR G P+K+TF++++++ S L+ L G+Q+HA V+K G D V ++LIS Y+
Sbjct: 571 FNNMMRG-GLIPNKVTFINLLAALSPLSVLELGKQVHAAVMKHGVMEDNVVDNALISCYA 629
Query: 119 RCGCLDDSVKTFLE-CEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
+ G + F + D + W+SMI+ Y ++G +EA++ M + TF
Sbjct: 630 KSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNGNLQEAMDCVWLMIHSGQIMDCCTFS 689
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
+L AC+ E+GME ++ + + + +VD+ +CG +D A+ L +M
Sbjct: 690 IILNACASVAALERGMELHAFGIRSHLESDVVVE-SALVDMYSKCGRVDYASKLFNSM-T 747
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRIAEEIL 268
+ N W +++S H A I EE+L
Sbjct: 748 QRNEFSWNSMISGYARHGLGRKAIEIFEEML 778
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 123/292 (42%), Gaps = 12/292 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G DL + L + Y K L +V MP RN ++W L++G +G+AE+ +
Sbjct: 91 GLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLHGIAEEAFRVF 150
Query: 61 NLMR---MVGFRPDKITFVSVISSCSELAT--LGQGQQIHAEVVKAGASLDVGVISSLIS 115
M G RP TF +++ +C + LG Q+H V K + + V ++LIS
Sbjct: 151 RAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYASNTTVCNALIS 210
Query: 116 MYSRC--GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQK----EF 169
MY C G + + F D++ W+++++ Y G LF+ M++ +
Sbjct: 211 MYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFKDMQRGDSRIQL 270
Query: 170 EANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAA 229
+ TF SL+ A S ++ + V K L + +V R G DEA
Sbjct: 271 RPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSGCSSDLYVGSALVSAFARHGLTDEAK 330
Query: 230 ALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLL 281
+ ++ K NA+ L+ ++ A +I +A YV+L
Sbjct: 331 DIFLSLKQK-NAVTLNGLIVGLVRQDFSEEAVKIFVGTRNTVDVNADTYVVL 381
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 66/131 (50%), Gaps = 1/131 (0%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
E D+V S+L MY K G + K+ M RN +W ++I+G A++GL ++ +
Sbjct: 716 LESDVVVESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKAIEIFE 775
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M PD +TFVSV+S+CS + +G + + G + S +I + R G
Sbjct: 776 EMLRSRESPDHVTFVSVLSACSHAGLVERGLEYFEMMPDHGILPQIEHYSCVIDLLGRAG 835
Query: 122 CLDDSVKTFLE 132
+ D +K +++
Sbjct: 836 KI-DKIKEYIQ 845
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 72/167 (43%), Gaps = 13/167 (7%)
Query: 92 QQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFH 151
+ +H E++K G + D+ + + L++ Y++ L + + F E + V W+ +++ Y H
Sbjct: 81 ENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLH 140
Query: 152 GKGEEAINLFEQM---EQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPR 208
G EEA +F M Q TF +LL AC G G F + V K
Sbjct: 141 GIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLG---FAVQVHGLVSKTE 197
Query: 209 LEHYTCVVDLL----GRC--GYLDEAAALIRNMPVKANAIIWKTLLS 249
T V + L G C G A + P++ + I W L+S
Sbjct: 198 YASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIR-DLITWNALMS 243
>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 627
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 162/445 (36%), Positives = 257/445 (57%), Gaps = 16/445 (3%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
++ + GSSL MY K+G + E ++ +P R+V++ +IAG AQ GL E+ L+ +
Sbjct: 183 YDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQ 242
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
++ G RP+ +T+ S++++ S LA L G+Q H V++ + +SLI MYS+CG
Sbjct: 243 RLQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCG 302
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM-EQKEFEANDVTFVSLL 180
L + + F + W++M+ Y HG G E + LF M ++K + + VT +++L
Sbjct: 303 NLSYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVL 362
Query: 181 YACSHCGLKEKGMEFFDLMVK-KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
CSH +++ G+ +D MV +Y KP EHY C+VD+LGR G +DEA I+ MP K
Sbjct: 363 SGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKP 422
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
A + +LL AC+ H S D+ + ++ + P++A YV+LSN++ASA RW+ V+ R
Sbjct: 423 TAGVLGSLLGACRVHLSVDIGEYVGHRLIEIEPENAGNYVILSNLYASAGRWEDVNNVRA 482
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M ++ V KEPG SW++ + +H F D++HPR E+ ++E++ +MK GYVPD
Sbjct: 483 MMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDISC 542
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPF--------------KYISEIKN 405
++D+D E+KE L HSEKLA+ F T G + + K S++
Sbjct: 543 VLYDVDEEQKEKMLLGHSEKLALTFGLITTGEGIPIRVFKNLRICVDCHNFAKIFSKVFE 602
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
RE+ +RD +RFH G CSCGDYW
Sbjct: 603 REVSLRDKNRFHQIVKGICSCGDYW 627
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 125/243 (51%), Gaps = 10/243 (4%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y K L + KV+ MP +NV++W +I+ +Q G + + L + M +P++ TF
Sbjct: 96 YGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTF 155
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
+V++SC + L G+QIH +VK + V SSL+ MY++ G ++++ + F
Sbjct: 156 ATVLTSCIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPE 215
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
DVV +++IA Y G EEA+ +F++++ + N VT+ SLL A S L + G +
Sbjct: 216 RDVVSCTAIIAGYAQLGLDEEALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQA 275
Query: 196 FDLMVKKYRRKPRLEHYTC----VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSAC 251
++++ L Y ++D+ +CG L A L NMP + AI W +L
Sbjct: 276 HCHVLRR-----ELPFYAVLQNSLIDMYSKCGNLSYAQRLFDNMPER-TAISWNAMLVGY 329
Query: 252 KTH 254
H
Sbjct: 330 SKH 332
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 106/213 (49%), Gaps = 10/213 (4%)
Query: 36 NVIAWITLIAGKAQNG-LAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQI 94
+V+ I+ NG L E +L+ L +GF + +++++C + L +GQ++
Sbjct: 18 SVLQTFRPISQLCSNGRLQEALLEMVMLGPEIGFH----CYDALLNACLDKRALREGQRV 73
Query: 95 HAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKG 154
HA ++K + + L+ Y +C CL+D+ K E +VV W++MI+ Y G
Sbjct: 74 HAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHS 133
Query: 155 EEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC 214
EA+++F +M + + + N+ TF ++L +C G + L+V K+ + +
Sbjct: 134 SEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGLIV-KWNYDSHIFVGSS 192
Query: 215 VVDLLGRCGYLDEAAALIRNMP----VKANAII 243
++D+ + G ++EA + +P V AII
Sbjct: 193 LLDMYAKAGQIEEAREIFECLPERDVVSCTAII 225
>gi|297602077|ref|NP_001052059.2| Os04g0118700 [Oryza sativa Japonica Group]
gi|222628272|gb|EEE60404.1| hypothetical protein OsJ_13579 [Oryza sativa Japonica Group]
gi|255675134|dbj|BAF13973.2| Os04g0118700 [Oryza sativa Japonica Group]
Length = 856
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 167/445 (37%), Positives = 252/445 (56%), Gaps = 29/445 (6%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV--- 66
++L MY + G ++ ++ + +V++W TLI G G D M+ +
Sbjct: 417 NALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEG 476
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
G P+ IT ++++ C+ LA +G++IH V+ DV V S+L+ MY++CGCL S
Sbjct: 477 GVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALS 536
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQK-EFEANDVTFVSLLYACSH 185
F + + W+ +I AYG HG G EA LF++M E N+VTF++ L ACSH
Sbjct: 537 RAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSH 596
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI-IW 244
G+ ++G++ F M + + +P + CVVD+LGR G LDEA A++ +M + W
Sbjct: 597 SGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMETGEQQVSAW 656
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
T+L AC+ H++ + E +L + P++A+ YVLL NI+++A +W +E R MR R
Sbjct: 657 STMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRR 716
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
V KEPG SW+E+ +H+F G+ +HP S E+ ++E L EM RGY PDT +HDM
Sbjct: 717 GVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVARGYTPDTSCVLHDM 776
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKN 405
D +K L+ HSEKLAIAF GL+ P K++S++
Sbjct: 777 DDGDKAAVLRCHSEKLAIAF-----GLLRAAPGATIRVAKNLRVCNDCHEAAKFLSKMVG 831
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
REI++RD RFHHFRNG+CSCGDYW
Sbjct: 832 REIVLRDVRRFHHFRNGQCSCGDYW 856
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 117/251 (46%), Gaps = 8/251 (3%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPI--RNVIAWITLIAGKAQNGLAEDVLDQYNLMRM-V 66
S+L MY + + +V ++P + + W +I G AQ G+ E+ L + M
Sbjct: 313 SALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEA 372
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
GF P + T SV+ +C+ + +H VVK G + + V ++L+ MY+R G D +
Sbjct: 373 GFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVA 432
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE---FEANDVTFVSLLYAC 183
+ F + DVV W+++I G +A L +M+Q E N +T ++LL C
Sbjct: 433 RRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGC 492
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
+ +G E V ++ + + +VD+ +CG L + A+ +P + N I
Sbjct: 493 AILAAPARGKEIHGYAV-RHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLP-RRNTIT 550
Query: 244 WKTLLSACKTH 254
W L+ A H
Sbjct: 551 WNVLIMAYGMH 561
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 126/264 (47%), Gaps = 8/264 (3%)
Query: 10 SSLAHMYMKSGSLVEGEKVIR-LMPIR-NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVG 67
++L MY + G + + +++ P R +V+ W T+++ Q+G+ ++ + M +G
Sbjct: 209 NALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALG 268
Query: 68 FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGA-SLDVGVISSLISMYSRCGCLDDS 126
RPD +TF S + +CS L L G+++HA V+K + + V S+L+ MY+ + +
Sbjct: 269 VRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKA 328
Query: 127 VKTFLECEYS--DVVLWSSMIAAYGFHGKGEEAINLFEQME-QKEFEANDVTFVSLLYAC 183
+ F S + +W++MI Y G EEA+ LF +ME + F + T S+L AC
Sbjct: 329 RQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPAC 388
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
+ +VK+ R ++D+ R G D A I M + +
Sbjct: 389 ARSEAFAGKEAVHGYVVKRGMAGNRFVQ-NALMDMYARLGKTD-VARRIFAMVDLPDVVS 446
Query: 244 WKTLLSACKTHKSTDMAGRIAEEI 267
W TL++ C A ++A E+
Sbjct: 447 WNTLITGCVVQGHVADAFQLAREM 470
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 4/154 (2%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
+ D+ GS+L MY K G L V +P RN I W LI +GL + ++
Sbjct: 513 LDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFD 572
Query: 62 LMRMVG-FRPDKITFVSVISSCSELATLGQGQQI-HAEVVKAGASLDVGVISSLISMYSR 119
M G RP+++TF++ +++CS + +G Q+ HA G +++ ++ + R
Sbjct: 573 RMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGR 632
Query: 120 CGCLDD--SVKTFLECEYSDVVLWSSMIAAYGFH 151
G LD+ ++ T +E V WS+M+ A H
Sbjct: 633 AGRLDEAYAMVTSMETGEQQVSAWSTMLGACRLH 666
>gi|449516914|ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At5g52630-like [Cucumis
sativus]
Length = 598
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 180/449 (40%), Positives = 256/449 (57%), Gaps = 25/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ D+ GSSL MY K G + + + MP RNV++W +I G AQ + L +
Sbjct: 156 GYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLF 215
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ + TF SVI CS L G+ IH +K V S+LIS+YS+C
Sbjct: 216 KQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKC 275
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ + + F E ++ LW+SM+ A H + LFE+M + N + F+S+L
Sbjct: 276 GVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFIXFLSVL 335
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
YACSH GL EKG E+F LM + Y +P EHY +VDLLGR G L EA ++I+ MP++
Sbjct: 336 YACSHAGLVEKGREYFSLM-RDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPT 394
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+W LL+ C+ HK T+MA +A+ IL ++ + +VLLSN +A+A R++ + R+
Sbjct: 395 ESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKM 454
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
+R+R VKKE G+SW+E N+VH FT GD+SH + +EI LEEL EM+ GYV DT
Sbjct: 455 LRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFV 514
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPFKYISEIKN--------------- 405
+ +D EEK +++HSE+LAIAF GLI P + I +KN
Sbjct: 515 LRAVDGEEKNETIRYHSERLAIAF-----GLITFPPGRPIRVMKNLRVCGDCHAAIKFMS 569
Query: 406 ----REIIVRDASRFHHFRNGKCSCGDYW 430
R +IVRD +RFH F +GKCSCGDYW
Sbjct: 570 KCCGRVLIVRDNNRFHRFEDGKCSCGDYW 598
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 126/275 (45%), Gaps = 4/275 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + + +L ++Y K+ + +V P ++ W ++I+ AQN L +
Sbjct: 55 GLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFF 114
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G RPD + S +C L G+ +H VK G DV V SSL+ MY++C
Sbjct: 115 RRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKC 174
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + D+ F E +VV WS MI Y G EA+ LF+Q ++ + ND TF S++
Sbjct: 175 GEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVI 234
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
CS E G L +K + ++ L +CG ++ A + +P + N
Sbjct: 235 RVCSSSTFLELGKLIHGLCLKMSFDSSSFVG-SALISLYSKCGVIEGAYQVFDEIPTR-N 292
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQ 273
+W ++L AC H T + EE+ +G+ P
Sbjct: 293 LGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPN 327
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 81/195 (41%), Gaps = 16/195 (8%)
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
N + F + +++ S + +L QG Q+HA ++K G V +LI++YS+
Sbjct: 14 NPLNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKT 73
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
S++ F E WSS+I+A+ + A+ F +M +D + S
Sbjct: 74 QLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSAT 133
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC-------VVDLLGRCGYLDEAAALIR 233
AC + G L VK Y C +VD+ +CG + +A L
Sbjct: 134 KACGFLRRSDVGKSVHCLAVKT--------GYYCDVFVGSSLVDMYAKCGEIGDARHLFD 185
Query: 234 NMPVKANAIIWKTLL 248
MP + N + W ++
Sbjct: 186 EMPER-NVVSWSGMI 199
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 163/444 (36%), Positives = 259/444 (58%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E D G+SL Y+ G + M +N+++W +I+G +QNGL + L +
Sbjct: 481 GLETDFFVGTSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALF 540
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
G + +I VSV +CS+L+ L G++ H V+KA + D V S+I MY++
Sbjct: 541 RKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVGCSIIDMYAKS 600
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
GC+ +S K F + +V W+++I A+G HG G+EAI L+E+M++ + T++ +L
Sbjct: 601 GCIKESRKVFDGLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQMPDRFTYIGIL 660
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC H GL E+G+++F M +P+LEHY C++D+L R G LD+A L+ MP +A+
Sbjct: 661 MACGHAGLVEEGLKYFKEMQNFNLIEPKLEHYACLIDMLARAGRLDDALRLVNEMPEEAD 720
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
IW +LL +C+T + ++ ++A+++L + P A YVLLSN++A +W GV R+
Sbjct: 721 NRIWSSLLRSCRTFGALEIGEKVAKKLLELEPDKAENYVLLSNLYAGLGKWDGVRRVRQM 780
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+E ++K+ G SW+E+ +V+ F +GD P+S EI + L + GY P+T +
Sbjct: 781 MKEIGLQKDAGCSWIEVGGRVYSFVVGDSLQPKSAEIRVIWRRLEERISEIGYKPNTSSV 840
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNR 406
+H++ EEK L+ HSEKLAI+F + T+G + + K IS+ R
Sbjct: 841 LHEVGEEEKIDILRGHSEKLAISFGLLKTTKGTTLRIYKNLRICADCHNAAKLISKAVER 900
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EI+VRD RFHHFR+G CSC DYW
Sbjct: 901 EIVVRDNKRFHHFRDGLCSCCDYW 924
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 142/266 (53%), Gaps = 6/266 (2%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY-NLM 63
D V + L MY GS ++ V M +N+I W L++G +NGL DV+ + +L+
Sbjct: 78 DYVLNTRLIKMYAMCGSPLDSRLVFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFMDLV 137
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
F+PD TF SVI +C + + G+ IH V+K G LDV V ++L+ MY +CG +
Sbjct: 138 SDTDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAV 197
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEAND-VTFVSLLYA 182
D+++K F +++V W+SMI A+ +G ++ +L +M +E D VT V++L
Sbjct: 198 DEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPV 257
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAA-ALIRNMPVKANA 241
C+ G + GM L VK + + + +V + +CGYL+EA + ++N N
Sbjct: 258 CAGEGEVDIGMGIHGLAVKLGLSEEVMVN-NAMVYMYSKCGYLNEAQMSFVKNN--NKNV 314
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEI 267
+ W T++SA + A + +E+
Sbjct: 315 VSWNTMISAFSLEGDVNEAFNLLQEM 340
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 112/188 (59%), Gaps = 7/188 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G LD+ G++L MY K G++ E KV MP N+++W ++I ++NG + D D
Sbjct: 176 GLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDL- 234
Query: 61 NLMRMV---GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMY 117
LM M+ G PD +T V+++ C+ + G IH VK G S +V V ++++ MY
Sbjct: 235 -LMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMY 293
Query: 118 SRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM--EQKEFEANDVT 175
S+CG L+++ +F++ +VV W++MI+A+ G EA NL ++M + +E +AN+VT
Sbjct: 294 SKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVT 353
Query: 176 FVSLLYAC 183
+++L AC
Sbjct: 354 ILNVLPAC 361
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 114/239 (47%), Gaps = 2/239 (0%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y K G+L EKV + + V +W LI G AQNG L M G +PD T
Sbjct: 395 YAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTI 454
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
S++ +C+ L +L G++IH V++ G D V +SL+S Y CG + F +
Sbjct: 455 SSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMKD 514
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
++V W++MI+ Y +G E++ LF + + +++++ VS+ ACS G E
Sbjct: 515 KNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEA 574
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
++K + + + ++D+ + G + E+ + + K N W ++ A H
Sbjct: 575 HGYVLKALQTEDAFVGCS-IIDMYAKSGCIKESRKVFDGLKDK-NVASWNAIIVAHGIH 631
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 118/261 (45%), Gaps = 23/261 (8%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +++ +++ +MY K G L E + +NV++W T+I+ + G DV + +
Sbjct: 278 GLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEG---DVNEAF 334
Query: 61 NL---MRMVG--FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLIS 115
NL M++ G + +++T ++V+ +C + L +++H + V + ++ I
Sbjct: 335 NLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRHCFQ-HVELSNAFIL 393
Query: 116 MYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVT 175
Y++CG L+ + K F V W+++I + +G +A++L QM + + T
Sbjct: 394 AYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFT 453
Query: 176 FVSLLYACSHCGLKEKGMEFFDLMVKK------YRRKPRLEHYTCVVDLLGRCGYLDEAA 229
SLL AC+H + G E +++ + L HY CG A
Sbjct: 454 ISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYI-------HCGKASSAR 506
Query: 230 ALIRNMPVKANAIIWKTLLSA 250
L M K N + W ++S
Sbjct: 507 VLFDRMKDK-NLVSWNAMISG 526
>gi|38344863|emb|CAE01289.2| OSJNBa0020P07.6 [Oryza sativa Japonica Group]
Length = 854
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 167/445 (37%), Positives = 252/445 (56%), Gaps = 29/445 (6%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV--- 66
++L MY + G ++ ++ + +V++W TLI G G D M+ +
Sbjct: 415 NALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEG 474
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
G P+ IT ++++ C+ LA +G++IH V+ DV V S+L+ MY++CGCL S
Sbjct: 475 GVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALS 534
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQK-EFEANDVTFVSLLYACSH 185
F + + W+ +I AYG HG G EA LF++M E N+VTF++ L ACSH
Sbjct: 535 RAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSH 594
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI-IW 244
G+ ++G++ F M + + +P + CVVD+LGR G LDEA A++ +M + W
Sbjct: 595 SGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMETGEQQVSAW 654
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
T+L AC+ H++ + E +L + P++A+ YVLL NI+++A +W +E R MR R
Sbjct: 655 STMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRR 714
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
V KEPG SW+E+ +H+F G+ +HP S E+ ++E L EM RGY PDT +HDM
Sbjct: 715 GVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVARGYTPDTSCVLHDM 774
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKN 405
D +K L+ HSEKLAIAF GL+ P K++S++
Sbjct: 775 DDGDKAAVLRCHSEKLAIAF-----GLLRAAPGATIRVAKNLRVCNDCHEAAKFLSKMVG 829
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
REI++RD RFHHFRNG+CSCGDYW
Sbjct: 830 REIVLRDVRRFHHFRNGQCSCGDYW 854
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 117/251 (46%), Gaps = 8/251 (3%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPI--RNVIAWITLIAGKAQNGLAEDVLDQYNLMRM-V 66
S+L MY + + +V ++P + + W +I G AQ G+ E+ L + M
Sbjct: 311 SALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEA 370
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
GF P + T SV+ +C+ + +H VVK G + + V ++L+ MY+R G D +
Sbjct: 371 GFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVA 430
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE---FEANDVTFVSLLYAC 183
+ F + DVV W+++I G +A L +M+Q E N +T ++LL C
Sbjct: 431 RRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGC 490
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
+ +G E V ++ + + +VD+ +CG L + A+ +P + N I
Sbjct: 491 AILAAPARGKEIHGYAV-RHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLP-RRNTIT 548
Query: 244 WKTLLSACKTH 254
W L+ A H
Sbjct: 549 WNVLIMAYGMH 559
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 126/264 (47%), Gaps = 8/264 (3%)
Query: 10 SSLAHMYMKSGSLVEGEKVIR-LMPIR-NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVG 67
++L MY + G + + +++ P R +V+ W T+++ Q+G+ ++ + M +G
Sbjct: 207 NALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALG 266
Query: 68 FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGA-SLDVGVISSLISMYSRCGCLDDS 126
RPD +TF S + +CS L L G+++HA V+K + + V S+L+ MY+ + +
Sbjct: 267 VRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKA 326
Query: 127 VKTFLECEYS--DVVLWSSMIAAYGFHGKGEEAINLFEQME-QKEFEANDVTFVSLLYAC 183
+ F S + +W++MI Y G EEA+ LF +ME + F + T S+L AC
Sbjct: 327 RQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPAC 386
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
+ +VK+ R ++D+ R G D A I M + +
Sbjct: 387 ARSEAFAGKEAVHGYVVKRGMAGNRFVQ-NALMDMYARLGKTD-VARRIFAMVDLPDVVS 444
Query: 244 WKTLLSACKTHKSTDMAGRIAEEI 267
W TL++ C A ++A E+
Sbjct: 445 WNTLITGCVVQGHVADAFQLAREM 468
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 4/154 (2%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
+ D+ GS+L MY K G L V +P RN I W LI +GL + ++
Sbjct: 511 LDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFD 570
Query: 62 LMRMVG-FRPDKITFVSVISSCSELATLGQGQQI-HAEVVKAGASLDVGVISSLISMYSR 119
M G RP+++TF++ +++CS + +G Q+ HA G +++ ++ + R
Sbjct: 571 RMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGR 630
Query: 120 CGCLDD--SVKTFLECEYSDVVLWSSMIAAYGFH 151
G LD+ ++ T +E V WS+M+ A H
Sbjct: 631 AGRLDEAYAMVTSMETGEQQVSAWSTMLGACRLH 664
>gi|116308873|emb|CAH66009.1| H0613H07.7 [Oryza sativa Indica Group]
gi|116317921|emb|CAH65944.1| H0716A07.2 [Oryza sativa Indica Group]
Length = 854
Score = 318 bits (814), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 167/445 (37%), Positives = 252/445 (56%), Gaps = 29/445 (6%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV--- 66
++L MY + G ++ ++ + +V++W TLI G G D M+ +
Sbjct: 415 NALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEG 474
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
G P+ IT ++++ C+ LA +G++IH V+ DV V S+L+ MY++CGCL S
Sbjct: 475 GVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALS 534
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQK-EFEANDVTFVSLLYACSH 185
F + + W+ +I AYG HG G EA LF++M E N+VTF++ L ACSH
Sbjct: 535 RAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSH 594
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI-IW 244
G+ ++G++ F M + + +P + CVVD+LGR G LDEA A++ +M + W
Sbjct: 595 SGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAW 654
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
T+L AC+ H++ + E +L + P++A+ YVLL NI+++A +W +E R MR R
Sbjct: 655 STMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRR 714
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
V KEPG SW+E+ +H+F G+ +HP S E+ ++E L EM RGY PDT +HDM
Sbjct: 715 GVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVARGYTPDTSCVLHDM 774
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKN 405
D +K L+ HSEKLAIAF GL+ P K++S++
Sbjct: 775 DDGDKAAVLRCHSEKLAIAF-----GLLRAAPGATIRVAKNLRVCNDCHEAAKFLSKMVG 829
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
REI++RD RFHHFRNG+CSCGDYW
Sbjct: 830 REIVLRDVRRFHHFRNGQCSCGDYW 854
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 117/251 (46%), Gaps = 8/251 (3%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPI--RNVIAWITLIAGKAQNGLAEDVLDQYNLMRM-V 66
S+L MY + + +V ++P + + W +I G AQ G+ E+ L + M
Sbjct: 311 SALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEA 370
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
GF P + T SV+ +C+ + +H VVK G + + V ++L+ MY+R G D +
Sbjct: 371 GFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVA 430
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE---FEANDVTFVSLLYAC 183
+ F + DVV W+++I G +A L +M+Q E N +T ++LL C
Sbjct: 431 RRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGC 490
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
+ +G E V ++ + + +VD+ +CG L + A+ +P + N I
Sbjct: 491 AILAAPARGKEIHGYAV-RHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLP-RRNTIT 548
Query: 244 WKTLLSACKTH 254
W L+ A H
Sbjct: 549 WNVLIMAYGMH 559
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 127/264 (48%), Gaps = 8/264 (3%)
Query: 10 SSLAHMYMKSGSLVEGEKVIR-LMPIR-NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVG 67
++L MY + G + + +++ P R +V+ W T+++ Q+G+ ++ + M +G
Sbjct: 207 NALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALG 266
Query: 68 FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGA-SLDVGVISSLISMYSRCGCLDDS 126
RPD +TF S + +CS L L G+++HA V+K + + V S+L+ MY+ + +
Sbjct: 267 VRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKA 326
Query: 127 VKTFLECEYS--DVVLWSSMIAAYGFHGKGEEAINLFEQME-QKEFEANDVTFVSLLYAC 183
+ F S + +W++MI Y G EEA+ LF +ME + F + T S+L AC
Sbjct: 327 RQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPAC 386
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
+ +VK+ R ++D+ R G D A + + + + +
Sbjct: 387 ARSEAFAGKEAVHGYVVKRGMAGNRFVQ-NALMDMYARLGKTDVARRIFAMVDLP-DVVS 444
Query: 244 WKTLLSACKTHKSTDMAGRIAEEI 267
W TL++ C A ++A E+
Sbjct: 445 WNTLITGCVVQGHVADAFQLAREM 468
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 4/154 (2%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
+ D+ GS+L MY K G L V +P RN I W LI +GL + ++
Sbjct: 511 LDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFD 570
Query: 62 LMRMVG-FRPDKITFVSVISSCSELATLGQGQQI-HAEVVKAGASLDVGVISSLISMYSR 119
M G RP+++TF++ +++CS + +G Q+ HA G +++ ++ + R
Sbjct: 571 RMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGR 630
Query: 120 CGCLDD--SVKTFLECEYSDVVLWSSMIAAYGFH 151
G LD+ ++ T +E V WS+M+ A H
Sbjct: 631 AGRLDEAYAMVTSMEAGEQQVSAWSTMLGACRLH 664
>gi|115456255|ref|NP_001051728.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|29124127|gb|AAO65868.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711802|gb|ABF99597.1| expressed protein [Oryza sativa Japonica Group]
gi|113550199|dbj|BAF13642.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|125588431|gb|EAZ29095.1| hypothetical protein OsJ_13153 [Oryza sativa Japonica Group]
gi|215736898|dbj|BAG95827.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 602
Score = 318 bits (814), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 159/446 (35%), Positives = 255/446 (57%), Gaps = 16/446 (3%)
Query: 1 GFELDLVAGSSLAHMY--MKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLD 58
GF D ++L HMY G L + V MP + + W +I G + GL+ D +D
Sbjct: 157 GFATDQYVSNTLIHMYSCFGGGFLGDARNVFDRMPKESAVTWSAMIGGYVRGGLSSDAVD 216
Query: 59 QYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
+ M+ G + D++T + V+++ ++L L + + V + G V + ++LI +
Sbjct: 217 LFREMQANGVQADEVTVIGVLAAATDLGALELARWVRRFVEREGIGKSVTLCNALIDTLA 276
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+CG +D +V F + VV W+S+I A G+G+EA+ +FE+M+ +DV F+
Sbjct: 277 KCGDVDGAVAVFEGMQQRSVVSWTSVIDALAMEGRGKEAVRVFEEMKVAGVPPDDVAFIG 336
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+L ACSH G+ ++G +FD M +Y +P++EHY C+VD+ GR G ++ A +R MP++
Sbjct: 337 VLTACSHAGMVDEGCGYFDAMKVEYGIEPKIEHYGCMVDMFGRAGMVERAMEFVRTMPIQ 396
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
N +IW++L+SAC+ H ++ I +L P A Y++LSN+ A +RW+ SE R
Sbjct: 397 PNPVIWRSLVSACRAHGRLELGESITRSLLHEYPAHEANYIMLSNVFALTQRWKEKSEIR 456
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
M +R +KK PG S +E+ +VH+F GD+SHP+ +I +EE+ E++ G++ T
Sbjct: 457 REMSKRGIKKVPGCSIVELDGEVHEFIAGDESHPQYKDIYRMVEEMARELRRVGHIAATS 516
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIK 404
+ D+D E+KE L+ HSEKLAIAFA G V + K IS++
Sbjct: 517 EVLLDLDEEDKEGALQWHSEKLAIAFALLRTPPGTQVRVVKNLRVCSDCHAAIKCISQVY 576
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
REI+VRD SRFH F++G CSC D+W
Sbjct: 577 RREIVVRDRSRFHRFKDGSCSCKDFW 602
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 105/223 (47%), Gaps = 9/223 (4%)
Query: 60 YNLMRMVGFRPDKITFVSVISSCSEL-ATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
+ LM P+K TF ++ +C+ L + G Q HA +K G + D V ++LI MYS
Sbjct: 114 FPLMLRGAVVPNKFTFPFLLKACAALPGSPDVGLQAHAAALKFGFATDQYVSNTLIHMYS 173
Query: 119 RC---GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVT 175
C G L D+ F V WS+MI Y G +A++LF +M+ +A++VT
Sbjct: 174 -CFGGGFLGDARNVFDRMPKESAVTWSAMIGGYVRGGLSSDAVDLFREMQANGVQADEVT 232
Query: 176 FVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM 235
+ +L A + G E + V++ + ++D L +CG +D A A+ M
Sbjct: 233 VIGVLAAATDLGALELA-RWVRRFVEREGIGKSVTLCNALIDTLAKCGDVDGAVAVFEGM 291
Query: 236 PVKANAIIWKTLLSACKTHKSTDMAGRIAEE--ILGVNPQDAA 276
+ + + W +++ A A R+ EE + GV P D A
Sbjct: 292 QQR-SVVSWTSVIDALAMEGRGKEAVRVFEEMKVAGVPPDDVA 333
>gi|115451769|ref|NP_001049485.1| Os03g0235200 [Oryza sativa Japonica Group]
gi|108707037|gb|ABF94832.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113547956|dbj|BAF11399.1| Os03g0235200 [Oryza sativa Japonica Group]
gi|125585525|gb|EAZ26189.1| hypothetical protein OsJ_10058 [Oryza sativa Japonica Group]
gi|215706461|dbj|BAG93317.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 641
Score = 318 bits (814), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 159/447 (35%), Positives = 255/447 (57%), Gaps = 27/447 (6%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY-NLM 63
D V S+LA MY K G + + +V MP+R+ ++W ++ G + + +++
Sbjct: 201 DAVLWSALADMYAKCGRVDDARRVFDRMPVRDAVSWTAMVERYFDGGRGGEGFRLFLHML 260
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
R G RP++ T+ V+ +C++ A G+Q+H + K+G S+L+ MYS+CG +
Sbjct: 261 RTRGVRPNEFTYAGVLRACAQFAVESFGRQVHGRMAKSGTGDSCFAESALLRMYSKCGDM 320
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
+V+ F D+V W+++I+ Y +G+ EEA+ F+ + + + VTFV +L AC
Sbjct: 321 GSAVRVFEAMAKPDLVSWTAVISGYAQNGQPEEALRYFDMFLRSGIKPDHVTFVGVLSAC 380
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
+H GL +KG+E F + ++Y + +HY CV+DLL R G + A +I NM VK N +
Sbjct: 381 AHAGLVDKGLEIFHSIKEQYCIEHTADHYACVIDLLSRSGQFERAEKMIGNMAVKPNKFL 440
Query: 244 WKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
W +LL C+ HK+ +A R AE + + P++ A YV L+NI+AS + V + R M
Sbjct: 441 WASLLGGCRIHKNVGLARRAAEALFEIEPENPATYVTLANIYASVGLFDEVEDVRRIMES 500
Query: 304 RNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHD 363
+ + K P SW+E+ +VH F +GDKSHP++ EI L++L +M GYV D +HD
Sbjct: 501 KGITKMPASSWIEVGRRVHVFLVGDKSHPKADEIYALLKKLYVKMVEEGYVADIEFVLHD 560
Query: 364 MDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP--------------------FKYISEI 403
++ E+KE ++ +HSE+LA+AF I+ P K IS+I
Sbjct: 561 VEDEQKEQDIGYHSERLAVAFG------IIATPEGSPIKVFKNLRICGDCHAAIKLISQI 614
Query: 404 KNREIIVRDASRFHHFRNGKCSCGDYW 430
R+IIVRD++RFHHF++G CSC DYW
Sbjct: 615 VQRDIIVRDSNRFHHFKDGICSCRDYW 641
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 75/163 (46%), Gaps = 29/163 (17%)
Query: 103 ASLDVGVISSLISMYSRCG-CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLF 161
A+ D+ ++LIS SR L + + F D WS++++ Y HG+ E A+ L+
Sbjct: 90 AAPDICSHNTLISALSRSPRHLPSARELFDRMPQRDHFAWSALVSGYTRHGQPEAALALY 149
Query: 162 EQMEQK--------EFEANDVTFVSLLYACS------HCGLKEKGMEFF--DLMVKKYRR 205
+M+++ EF A+ + C HC + +G++ D ++
Sbjct: 150 RRMQEEPGNDGADNEFTASSALAAAAAARCGRAGRELHCHVVRRGIDAAGGDAVL----- 204
Query: 206 KPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
++ + D+ +CG +D+A + MPV+ +A+ W ++
Sbjct: 205 ------WSALADMYAKCGRVDDARRVFDRMPVR-DAVSWTAMV 240
>gi|225450911|ref|XP_002280644.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14330
[Vitis vinifera]
gi|296088358|emb|CBI36803.3| unnamed protein product [Vitis vinifera]
Length = 652
Score = 318 bits (814), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 158/441 (35%), Positives = 254/441 (57%), Gaps = 15/441 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D V ++L +Y + G E +V MP RNV++W +LIAG + + ++ + +M+
Sbjct: 212 DQVVNNALLRLYSEDGCFDEALRVFDGMPHRNVVSWNSLIAGLVKKDGVFEAIEAFRIMQ 271
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G +T +++ C+ + LG G++IHA +VK+ A D V++SL+ MY++CG +D
Sbjct: 272 GKGMGFSWVTLTTILPVCARVTALGSGKEIHAVIVKSTAKPDAPVLNSLVDMYAKCGAMD 331
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ F + D+ W+++I Y +G+ EA+ F++M F + +TF++LL CS
Sbjct: 332 YCRRVFNGMQGKDLTSWNTLITGYAINGRMTEAMESFQEMICSGFSPDGITFIALLSGCS 391
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL + G F++M Y P +EHY C+VD+LGR G + EA +++NMP K IW
Sbjct: 392 HAGLADDGCRLFEMMKMDYGISPTVEHYACLVDVLGRAGRIKEALEIVKNMPFKPTGSIW 451
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
+LL++C+ H + +A +A+ + + P +A YV+LSNI+A+A W+ V RE M +R
Sbjct: 452 GSLLNSCRLHGNVPLAEAVAKRLFELEPNNAGNYVMLSNIYANAGMWESVKVVREFMEKR 511
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPR-SMEIDLYLEELTSEMKLRGYVPDTGADMHD 363
+ KE G SWL+IK+++H F G + R S+E + L M+ GYVPDTG +HD
Sbjct: 512 GMTKEAGCSWLQIKSKIHTFVAGGSNEFRNSVEYKKVWKRLMEAMEEVGYVPDTGVVLHD 571
Query: 364 MDSEEKEYNLKHHSEKLAIAFA----------EHTRGLIVMLP----FKYISEIKNREII 409
+ E + + HSE+LA FA T+ L V + K +S++ R I+
Sbjct: 572 VSEEMRAMWVCGHSERLATMFALINTASGMPIRITKNLRVCVDCHSWVKTLSKVTGRVIV 631
Query: 410 VRDASRFHHFRNGKCSCGDYW 430
+RD +RFHHF++G CSC DYW
Sbjct: 632 LRDTNRFHHFKDGVCSCKDYW 652
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 112/245 (45%), Gaps = 4/245 (1%)
Query: 40 WITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVV 99
W+ + G ++NG ++ L Y M + F + +CS+L L G+ +HA+V+
Sbjct: 146 WVAMGIGYSRNGYPKEALLLYYEMVCQFGQLGNFAFSMALKACSDLGDLQTGRAVHAQVL 205
Query: 100 KAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAIN 159
KA D V ++L+ +YS GC D++++ F + +VV W+S+IA EAI
Sbjct: 206 KATEDPDQVVNNALLRLYSEDGCFDEALRVFDGMPHRNVVSWNSLIAGLVKKDGVFEAIE 265
Query: 160 LFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLL 219
F M+ K + VT ++L C+ G E ++VK KP +VD+
Sbjct: 266 AFRIMQGKGMGFSWVTLTTILPVCARVTALGSGKEIHAVIVKS-TAKPDAPVLNSLVDMY 324
Query: 220 GRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAP 277
+CG +D + M K + W TL++ + A +E++ G +P
Sbjct: 325 AKCGAMDYCRRVFNGMQGK-DLTSWNTLITGYAINGRMTEAMESFQEMICSGFSPDGITF 383
Query: 278 YVLLS 282
LLS
Sbjct: 384 IALLS 388
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 7/142 (4%)
Query: 113 LISMYSRCGCLDDSVKTFLECEYSDVVL----WSSMIAAYGFHGKGEEAINLFEQMEQKE 168
LI+++S C +D++ + F E DV L W +M Y +G +EA+ L+ +M +
Sbjct: 115 LITLFSVCRRVDEARRVF-EDGGEDVDLPESVWVAMGIGYSRNGYPKEALLLYYEMVCQF 173
Query: 169 FEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEA 228
+ + F L ACS G + G V K P ++ L G DEA
Sbjct: 174 GQLGNFAFSMALKACSDLGDLQTG-RAVHAQVLKATEDPDQVVNNALLRLYSEDGCFDEA 232
Query: 229 AALIRNMPVKANAIIWKTLLSA 250
+ MP + N + W +L++
Sbjct: 233 LRVFDGMPHR-NVVSWNSLIAG 253
>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 762
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 164/443 (37%), Positives = 262/443 (59%), Gaps = 15/443 (3%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E +LV+ +S+ ++K G++ + + MP R+V++W +++A AQ G + L ++
Sbjct: 320 ERNLVSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQ 379
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
MR VG +P + T VS++S+C+ L L +G +H + ++ V ++L+ MY++CG
Sbjct: 380 MRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGK 439
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
+ + + F E DV+ W+++IA HG +EA LF++M++ E ND+TFV++L A
Sbjct: 440 ISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSA 499
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
CSH G+ ++G + D M Y +P++EHY CV+DLL R G+L+EA LI MP++ N
Sbjct: 500 CSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPS 559
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMR 302
LL C+ H + ++ + + ++ + P + Y+LLSNI+A+AK+W + R M+
Sbjct: 560 ALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMK 619
Query: 303 ERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLR-GYVPDTGADM 361
+ K PGVS +E+K VH+F GD SHP S +I L E+ + +K GY DTG +
Sbjct: 620 VNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSAIGYSADTGNVL 679
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFA----------EHTRGLIVMLP----FKYISEIKNRE 407
DM+ E+KE+ L HSEKLAIA+ + L V K IS++ RE
Sbjct: 680 LDMEEEDKEHALAVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVIKLISKVYGRE 739
Query: 408 IIVRDASRFHHFRNGKCSCGDYW 430
IIVRD +RFHHF +G+CSC D+W
Sbjct: 740 IIVRDRNRFHHFEDGECSCLDFW 762
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 144/291 (49%), Gaps = 26/291 (8%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQN---GLAEDVL 57
GFE D SSL H+Y L +++ L R+V++W +I G ++ G A V
Sbjct: 225 GFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHARMVF 284
Query: 58 DQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMY 117
D RMV D I++ ++I+ + + + + +++ E+ + ++ +S+++ +
Sbjct: 285 D-----RMVCR--DVISWNTMINGYAIVGKIDEAKRLFDEMPER----NLVSWNSMLAGF 333
Query: 118 SRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
+CG ++D+ F E DVV W+SM+A Y GK EA+ LF+QM + + T V
Sbjct: 334 VKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVV 393
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY----TCVVDLLGRCGYLDEAAALIR 233
SLL AC+H G +KG L + Y R+E T +VD+ +CG + A +
Sbjct: 394 SLLSACAHLGALDKG-----LHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFN 448
Query: 234 NMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLS 282
M K + + W T+++ H + A ++ +E+ GV P D +LS
Sbjct: 449 AMESK-DVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILS 498
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 118/243 (48%), Gaps = 12/243 (4%)
Query: 42 TLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA 101
+LI + + + L Y+ M G +PD +T+ VI +C+E + G +H VVK+
Sbjct: 165 SLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNESSVTWFGLLVHTHVVKS 224
Query: 102 GASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLF 161
G D ++SSLI +Y+ L + + F C DVV W++MI Y H + A +F
Sbjct: 225 GFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHARMVF 284
Query: 162 EQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGR 221
++M ++ +++ +++ + G ++ FD M ++ L + ++ +
Sbjct: 285 DRMVCRDV----ISWNTMINGYAIVGKIDEAKRLFDEMPER-----NLVSWNSMLAGFVK 335
Query: 222 CGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYV 279
CG +++A L MP + + + W ++L+ + A + +++ +GV P +A
Sbjct: 336 CGNVEDAFGLFSEMPCR-DVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVS 394
Query: 280 LLS 282
LLS
Sbjct: 395 LLS 397
>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
Length = 987
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 158/443 (35%), Positives = 262/443 (59%), Gaps = 15/443 (3%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
+L++++ ++L Y+K G + ++ +M R+VIAW +I G QNG ++ ++ +
Sbjct: 545 DLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRS 604
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M ++G P+ T +V+S+C+ LA L G+QIH + +++ V V +++I++Y+R G
Sbjct: 605 MILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVYARSGS 664
Query: 123 LDDSVKTFLE-CEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+ + + F + C + + W+SMI A HG GE+A+ LFE+M + + + +T+V +L
Sbjct: 665 VPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFEEMVRVGVKPDHITYVGVLS 724
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
AC+H G +KG +++ M ++ P++ HY C+VDL R G L EA I+ MPV +
Sbjct: 725 ACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACMVDLHARAGLLTEAHEFIQRMPVAPDT 784
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
++W +LL+AC+ K+ D+A A ++L ++P ++ Y L+N++++ RW + +
Sbjct: 785 VVWGSLLAACRVRKNADLAELAAGKLLSIDPHNSGAYSALANVYSACGRWNDAARIWKLR 844
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
+++ VKKE G SW ++ +VH F D HP+ I E+ E+K G+VPD + +
Sbjct: 845 KDKGVKKETGFSWTHVRGKVHVFGADDVLHPQRDSIYRKAAEMWEEIKKAGFVPDLNSVL 904
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFA-----EHTRGLIVM---------LPFKYISEIKNRE 407
HD+D E KE L HSEKLAIAF E T I+ K+IS+ +RE
Sbjct: 905 HDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRIMKNLRVCNDCHTAIKFISKFVDRE 964
Query: 408 IIVRDASRFHHFRNGKCSCGDYW 430
IIVRDA+RFHHFR+G CSC DYW
Sbjct: 965 IIVRDATRFHHFRDGYCSCKDYW 987
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 128/263 (48%), Gaps = 13/263 (4%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+SL +Y KSG L + V MP R+ ++W +I G ++G D + + M GF
Sbjct: 285 NSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMVSEGFA 344
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P + T +V+SSC+ + G G+++H VVK G S V V +S++ MY +CG + +
Sbjct: 345 PSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAETARAV 404
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F + V W+ M++ Y G+ E A+++FE M ++ V++ +++ + GL
Sbjct: 405 FERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSI----VSWNTIIAGYNQNGLD 460
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYL------DEAAALIRNMPVKANAII 243
++FF M+ +P + +T V +L C L + + I + ++ I
Sbjct: 461 GMALKFFSRMLSASSMEP--DAFT-VTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQI 517
Query: 244 WKTLLSACKTHKSTDMAGRIAEE 266
L+S S + A RI ++
Sbjct: 518 MNALISTYAKSGSVETARRIMDQ 540
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 149/361 (41%), Gaps = 72/361 (19%)
Query: 12 LAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN-LMRMVGFRP 70
+ +Y G + + M R++++W T+IAG QNGL L ++ ++ P
Sbjct: 419 MVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMALKFFSRMLSASSMEP 478
Query: 71 DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD----- 125
D T SV+S+C+ L L G+Q+H+ +++ G ++++LIS Y++ G ++
Sbjct: 479 DAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALISTYAKSGSVETARRIM 538
Query: 126 -----------SVKTFLE-----------------CEYSDVVLWSSMIAAYGFHGKGEEA 157
S LE DV+ W++MI Y +G+ +EA
Sbjct: 539 DQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEA 598
Query: 158 INLFEQMEQKEFEANDVTFVSLLYACS-----------HC----GLKEKGMEFFDLMVKK 202
+ LF M E N T ++L AC+ HC L+E+ + + ++
Sbjct: 599 MELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITV 658
Query: 203 YRRKPRLE----------------HYTCVVDLLGRCGYLDEAAALIRNM---PVKANAII 243
Y R + +T ++ + + G ++A L M VK + I
Sbjct: 659 YARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFEEMVRVGVKPDHIT 718
Query: 244 WKTLLSACKTHKSTDMAGRIAEEIL---GVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+ +LSAC D R E++ G+ PQ + Y + ++HA A EF +
Sbjct: 719 YVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQ-MSHYACMVDLHARAGLLTEAHEFIQR 777
Query: 301 M 301
M
Sbjct: 778 M 778
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 83/215 (38%), Gaps = 45/215 (20%)
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAG---------------ASLDVG----------- 108
+ ++ C G+ IHA VKAG AS+ V
Sbjct: 212 YARLLQLCRTAVNPSAGRAIHAHAVKAGLLVSTYLCNNLLAYYASVGVSRGCFREARCLF 271
Query: 109 -----------VISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEA 157
+SL+S+Y++ G L D+ F E D V W+ MI G+ +A
Sbjct: 272 DDIPYARRNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDA 331
Query: 158 INLFEQMEQKEFEANDVTFVSLLYACS---HCGLKEKGMEFFDLMVKKYRRKPRLEHYTC 214
+ F M + F + T ++L +C+ CG+ K F V K +
Sbjct: 332 VKTFLDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPF----VVKLGLSSCVPVANS 387
Query: 215 VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
V+ + G+CG + A A+ M V++ + W ++S
Sbjct: 388 VLYMYGKCGDAETARAVFERMQVRSVS-SWNVMVS 421
>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 666
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 162/445 (36%), Positives = 266/445 (59%), Gaps = 16/445 (3%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
+E + GSSL MY KSG + + V +P R+V+A +I+G AQ GL E+ L +
Sbjct: 222 YESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFR 281
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
+++ G + +T+ SV+++ S LA L G+Q+H+ V+++G V +++SLI MYS+CG
Sbjct: 282 QLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCG 341
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM-EQKEFEANDVTFVSLL 180
+ + + F + W++M+ Y HG E + LF+ M E+ + + + +T++++L
Sbjct: 342 NVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVL 401
Query: 181 YACSHCGLKEKGME-FFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
CSH L++ G+E F++++ K +P + HY CVVDLLGR G ++EA I+ MP
Sbjct: 402 SGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVP 461
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
A IW +LL +C+ H ++ + +++L + P++A YV+LSN++ASA +W+ + R+
Sbjct: 462 TAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAGKWEDMRNIRD 521
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M+E+ V KEPG SW+E+ VH F D +HPR E+ ++EL+ + K GYVPD
Sbjct: 522 LMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEVAKKVKELSIKFKEDGYVPDLSC 581
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFA-------------EHTRGLIVMLPF-KYISEIKN 405
++D+D E+KE L HSEKLA+AF ++ R + F K++S +
Sbjct: 582 VLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGTTIRVIKNLRICVDCHSFAKFVSRLYA 641
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
R +I+RD +RFH+ G CSCGDYW
Sbjct: 642 RTVILRDKNRFHNIVGGVCSCGDYW 666
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 118/245 (48%), Gaps = 2/245 (0%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+ L +Y K L + ++ MP +NV++W +I+ +Q G A + L+ + M
Sbjct: 129 TRLIVLYNKCDCLGDAREMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTE 188
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P+ TF ++++SC G+QIH+ +K + V SSL+ MY++ G + D+
Sbjct: 189 PNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGV 248
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F DVV +++I+ Y G EEA+ LF Q++ + +N VT+ S+L A S
Sbjct: 249 FHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAAL 308
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
G + +++ + + ++D+ +CG + A + +MP + I W +L
Sbjct: 309 NHGKQVHSHVLRS-GQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPER-TCISWNAMLV 366
Query: 250 ACKTH 254
H
Sbjct: 367 GYSKH 371
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 98/196 (50%), Gaps = 9/196 (4%)
Query: 52 LAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVIS 111
L E +L L R V F + ++++ C + +GQ++H ++K V + +
Sbjct: 74 LKEALLQMAILGREVKFE----GYDTILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRT 129
Query: 112 SLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEA 171
LI +Y++C CL D+ + F E +VV W++MI+AY G EA+NLF +M + + E
Sbjct: 130 RLIVLYNKCDCLGDAREMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEP 189
Query: 172 NDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAAL 231
N TF ++L +C E G + + +K+ + + + ++D+ + G + +A +
Sbjct: 190 NHFTFATILTSCYGSLGFETGRQIHSIAIKR-NYESHMFVGSSLLDMYAKSGRICDAHGV 248
Query: 232 IRNMP----VKANAII 243
+P V AII
Sbjct: 249 FHCLPERDVVACTAII 264
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 168/451 (37%), Positives = 257/451 (56%), Gaps = 26/451 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF +L +SL +Y K G L + + ++VI+W TLI G L ++ L +
Sbjct: 296 GFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLF 355
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVK--AGASLDVGVISSLISMYS 118
M G RP+ +T +S++ +C+ L + G+ IH + K A+ + +SLI MY+
Sbjct: 356 QEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYA 415
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+CG ++ + + F + + W++MI + HG+ + A ++F +M + E +D+TFV
Sbjct: 416 KCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVG 475
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
LL ACS G+ + G F M + Y+ P+LEHY C++DLLG G EA +I NM ++
Sbjct: 476 LLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNMEME 535
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
+ +IW +LL ACK + ++ A+ ++ + P++ YVLLSNI+A+A RW V++ R
Sbjct: 536 PDGVIWCSLLKACKIRGNVELGESFAQNLIKIEPENPGCYVLLSNIYATAGRWNEVAKIR 595
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
+ ++ +KK PG S +EI + VH+F +GDK HPR+ EI LEE+ ++ G+VPDT
Sbjct: 596 ALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTS 655
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKY 399
+ +M+ E KE L+HHSEKLAIAF GLI P K
Sbjct: 656 EVLQEMEEEWKEGALRHHSEKLAIAF-----GLISTKPGTKLTIVKNLRVCRNCHEATKL 710
Query: 400 ISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
IS+I REII RD +RFHHFR+G CSC DYW
Sbjct: 711 ISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 156/307 (50%), Gaps = 8/307 (2%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+V+ ++L Y G + +K+ +P+++V++W +I+G A+ G ++ L+ + M
Sbjct: 199 DVVSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMM 258
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
RPD+ T V+V+S+C++ ++ G+Q+H+ + G ++ +++SL+ +YS+CG L+
Sbjct: 259 KTNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELE 318
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ F Y DV+ W+++I Y +EA+ LF++M + NDVT +S+L AC+
Sbjct: 319 TACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACA 378
Query: 185 HCGLKEKGM---EFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
H G + G + D +K L T ++D+ +CG + EAA + N + +
Sbjct: 379 HLGAIDIGRWIHVYIDKRLKSATNASSLR--TSLIDMYAKCGDI-EAAHQVFNSILHKSL 435
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
W ++ H D A I + +G+ P D LLS S G FR
Sbjct: 436 SSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRT 495
Query: 300 AMRERNV 306
++ +
Sbjct: 496 MTQDYKI 502
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 121/274 (44%), Gaps = 35/274 (12%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
N++ W T+ G A + L Y M +G P+ TF ++ SC++ +GQQIH
Sbjct: 98 NLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIH 157
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT-------------------------- 129
V+K G LD+ V +SLIS+Y + G L+D+ K
Sbjct: 158 GHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIE 217
Query: 130 -----FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
F E DVV W++MI+ Y G +EA+ LF++M + ++ T V+++ AC+
Sbjct: 218 SAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACA 277
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
G E G + + + L+ ++DL +CG L+ A L + K + I W
Sbjct: 278 QSGSIELGRQVHS-WIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYK-DVISW 335
Query: 245 KTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAA 276
TL+ A + +E+L G P D
Sbjct: 336 NTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVT 369
>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
Length = 897
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 150/356 (42%), Positives = 227/356 (63%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D G++L MY K G + + +K+ + +++W +I+G + +ED +
Sbjct: 514 GMGFDSFVGAALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFF 573
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M +G PD T+ +V+ +C+ LAT+G G+QIHA+++K DV + S+L+ MYS+C
Sbjct: 574 SRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQIHAQIIKQELQSDVYICSTLVDMYSKC 633
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + DS F + D V W++M+ Y HG GEEA+ LFE M+ + N TFVS+L
Sbjct: 634 GNMQDSQLMFEKAPNRDFVTWNAMLCGYAHHGLGEEALKLFESMQLVNVKPNHATFVSVL 693
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+H GL +KG+ +FD+M+ +Y P+ EHY+C+VD+LGR G +DEA L++ MP +A+
Sbjct: 694 RACAHMGLVDKGLHYFDVMLSEYGLDPQSEHYSCMVDILGRSGRIDEALNLVQKMPFEAD 753
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A+IW+ LLS CK H + ++A + +L ++PQD++ VLLSNI+A A W VSE R+
Sbjct: 754 AVIWRNLLSVCKIHGNVEVAEKATRALLQLDPQDSSACVLLSNIYADAGMWGNVSEMRKM 813
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPD 356
MR +KKEPG SW+E+K++VH F +GDK HPR EI L L EM+ GY+PD
Sbjct: 814 MRHNKLKKEPGCSWIELKDEVHAFLVGDKGHPRDEEIYEKLGVLIGEMQSVGYIPD 869
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 133/275 (48%), Gaps = 8/275 (2%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
++ +++ MY K +L E + +M R+ ++W +IA QNG E+ L + M
Sbjct: 417 NICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAHFASMI 476
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
PD T+ SV+ +C+ L G +IH ++K+G D V ++L+ MY +CG ++
Sbjct: 477 HSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIE 536
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ K E +V W+++I+ + + E+A F +M + ++ T+ ++L C+
Sbjct: 537 KADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCA 596
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTC--VVDLLGRCGYLDEAAALIRNMPVKANAI 242
+ G + ++K+ + + Y C +VD+ +CG + ++ + P + + +
Sbjct: 597 NLATVGLGKQIHAQIIKQELQS---DVYICSTLVDMYSKCGNMQDSQLMFEKAPNR-DFV 652
Query: 243 IWKTLLSACKTHKSTDMAGRIAE--EILGVNPQDA 275
W +L H + A ++ E +++ V P A
Sbjct: 653 TWNAMLCGYAHHGLGEEALKLFESMQLVNVKPNHA 687
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 129/254 (50%), Gaps = 2/254 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ D+V GS+L MY K L + V +P +N ++W +IAG QN + L+ +
Sbjct: 211 GFDCDVVTGSALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELF 270
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ VG + + S+ SC+ L+ L G+++H+ +K+ D+ V ++ + MY++C
Sbjct: 271 KEMQGVGVGVSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKC 330
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + D+ K + ++++I Y +G +A+ F+ + + +++T L
Sbjct: 331 GRMADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGAL 390
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+ +G + L VK + ++D+ G+C L EA+ L +M + +
Sbjct: 391 NACASIRGDLEGRQVHGLAVKSISMS-NICVANAILDMYGKCKALAEASDLF-DMMERRD 448
Query: 241 AIIWKTLLSACKTH 254
A+ W +++AC+ +
Sbjct: 449 AVSWNAIIAACEQN 462
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 133/276 (48%), Gaps = 4/276 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
F D++ G++ MY K G + + +KV+ MP ++ ++ +I G A++ L +
Sbjct: 312 AFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKSF 371
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
L+ G D+IT +++C+ + +G+Q+H VK+ + ++ V ++++ MY +C
Sbjct: 372 QLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAVKSISMSNICVANAILDMYGKC 431
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
L ++ F E D V W+++IAA +G EE + F M E +D T+ S+L
Sbjct: 432 KALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSVL 491
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+ GME ++K +VD+ +CG + E A I + +
Sbjct: 492 KACAGRQALNTGMEIHTRIIKSGMGFDSFVG-AALVDMYCKCGMI-EKADKIHDRTEQKT 549
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQD 274
+ W ++S + ++ A + +L GVNP +
Sbjct: 550 MVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDN 585
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 111/232 (47%), Gaps = 1/232 (0%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+V+ +S+ Y G + K MP R+V++W ++I+G QNG +D + M
Sbjct: 114 DVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFLEMG 173
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G D+ + V+ +C L G Q+H VVK G DV S+L+ MY++C LD
Sbjct: 174 RCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLD 233
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
DS+ F E + V WS+MIA + + E + LF++M+ + + SL +C+
Sbjct: 234 DSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCA 293
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
G E +K + T +D+ +CG + +A ++ +MP
Sbjct: 294 ALSALRLGKELHSHALKSAFGSDIIVG-TATLDMYAKCGRMADAQKVLSSMP 344
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 103/233 (44%), Gaps = 34/233 (14%)
Query: 70 PDKI-TFVSVISSCSELATLGQGQQIHAEVVKAGAS------------------------ 104
P KI TF + CS+ +L G+Q HA ++ G
Sbjct: 46 PAKIRTFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACK 105
Query: 105 -------LDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEA 157
DV +S+IS Y+ CG +D + K F E DVV W+S+I+ + +G+ ++
Sbjct: 106 VFDKMYLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKS 165
Query: 158 INLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVD 217
I++F +M + + + +L AC + G++ L+V K+ + + ++
Sbjct: 166 IDVFLEMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVV-KFGFDCDVVTGSALLG 224
Query: 218 LLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGV 270
+ +C LD++ ++ +P K N + W +++ C + + +E+ GV
Sbjct: 225 MYAKCKRLDDSLSVFSELPEK-NWVSWSAMIAGCVQNDRNVEGLELFKEMQGV 276
>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 881
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 150/370 (40%), Positives = 233/370 (62%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G LD GS++ MY K G LVE EK+ + R ++W ++I+G + E+ L +
Sbjct: 503 GMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYF 562
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M VG PD T+ +V+ C+ LAT+ G+QIH +++K DV + S+++ MYS+C
Sbjct: 563 SRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMYSKC 622
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + DS F + D V WS+MI AY +HG GE+AI LFE+M+ + + N F+S+L
Sbjct: 623 GNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVL 682
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+H G +KG+ +F M Y P++EHY+C+VDLLGR G ++EA LI +MP +A+
Sbjct: 683 RACAHMGFVDKGLHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMPFEAD 742
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+IW+TLL C+ + ++A + A +L ++PQD++ YVLLSN++A A W V++ R
Sbjct: 743 DVIWRTLLGICRLQGNVEVAEKAANSLLQLDPQDSSAYVLLSNVYAIAGMWGEVAKIRSF 802
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+ +KKEPG SW++++++VH F +GDK+HPRS EI L EMK GYVP+
Sbjct: 803 MKNYKLKKEPGCSWIQVRDEVHAFLVGDKAHPRSEEIYQQTHLLVDEMKWDGYVPEIDGF 862
Query: 361 MHDMDSEEKE 370
+ D + +E++
Sbjct: 863 LLDEEVDEQD 872
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 148/304 (48%), Gaps = 10/304 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + ++ +++ MY K G+L+E + M I++ ++W +IA QN E+ L +
Sbjct: 402 GLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALF 461
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M PD TF SV+ +C+ L G ++H V+K+G LD V S++I MY +C
Sbjct: 462 VSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKC 521
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L ++ K E V W+S+I+ + +GE A++ F +M Q ++ T+ ++L
Sbjct: 522 GMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVL 581
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
C++ E G + + K + + + +VD+ +CG + ++ + P K +
Sbjct: 582 DICANLATVELGKQIHG-QILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAP-KRD 639
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAP--YVLLSNIHASAKRW---QGVS 295
+ W ++ A H + A ++ EE+ Q+ P + +S + A A +G+
Sbjct: 640 YVTWSAMICAYAYHGLGEDAIKLFEEM---QLQNVKPNHTIFISVLRACAHMGFVDKGLH 696
Query: 296 EFRE 299
FRE
Sbjct: 697 YFRE 700
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 119/254 (46%), Gaps = 10/254 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ D+V G++L MY L + MP RN + W +IAG +N + L Y
Sbjct: 200 GFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLY 259
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+M G + TF S SC+ L+ G Q+HA +K D V ++ + MY++C
Sbjct: 260 KVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKC 319
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
+ D+ K F +++I Y + EA+ +F +++ + ++++ L
Sbjct: 320 DRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGAL 379
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV----VDLLGRCGYLDEAAALIRNMP 236
ACS +G++ L V K L+ CV +D+ +CG L EA + +M
Sbjct: 380 TACSAIKGYLEGIQLHGLAV-----KCGLDFNICVANTILDMYAKCGALMEACLIFDDME 434
Query: 237 VKANAIIWKTLLSA 250
+K +A+ W +++A
Sbjct: 435 IK-DAVSWNAIIAA 447
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 138/290 (47%), Gaps = 9/290 (3%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F D + G++ MY K +V+ KV P + LI G A+ + L+ +
Sbjct: 302 FGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFR 361
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
++ D+I+ +++CS + +G Q+H VK G ++ V ++++ MY++CG
Sbjct: 362 SLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCG 421
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
L ++ F + E D V W+++IAA+ + EE + LF M + E +D TF S++
Sbjct: 422 ALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVK 481
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY--TCVVDLLGRCGYLDEAAALIRNMPVKA 239
AC+ GME ++K L+ + + ++D+ +CG L EA + + +
Sbjct: 482 ACAGKKALNYGMEVHGRVIKS---GMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEER- 537
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHAS 287
+ W +++S + K + A +L GV P D Y + +I A+
Sbjct: 538 TTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIP-DNFTYATVLDICAN 586
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 110/232 (47%), Gaps = 1/232 (0%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+++ +++ Y G++ + + MP R+V++W ++++ QNG ++ + MR
Sbjct: 103 DVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMR 162
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
++ + D TF V+ +C+ + G G Q+H ++ G DV ++L+ MYS C LD
Sbjct: 163 LLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLD 222
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ F E + V WS++IA Y + + E + L++ M + + TF S +C+
Sbjct: 223 HAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCA 282
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
E G + +K + T +D+ +C + +A + P
Sbjct: 283 GLSAFELGTQLHAYALKTNFGYDNIVG-TATLDMYAKCDRMVDARKVFNTFP 333
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 88/214 (41%), Gaps = 41/214 (19%)
Query: 72 KITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFL 131
K+TF + CS L + G+Q HA++ G V V + L+ Y +C L+ + F
Sbjct: 38 KLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFD 97
Query: 132 ECEYSDVVLWSSMIAAY----------------------------------GFHGKGEEA 157
+ DV+ W++MI Y GFH K +
Sbjct: 98 KMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRK---S 154
Query: 158 INLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF-FDLMVKKYRRKPRLEHYTCVV 216
I +F +M E + + TF +L AC+ G+++ G+ + + + T +V
Sbjct: 155 IEIFTKMRLLEIQHDYATFAVVLKACT--GIEDYGLGLQVHCLAIQMGFDSDVVTGTALV 212
Query: 217 DLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
D+ C LD A + MP + N++ W +++
Sbjct: 213 DMYSTCKKLDHAFNIFCEMPER-NSVCWSAVIAG 245
>gi|297739965|emb|CBI30147.3| unnamed protein product [Vitis vinifera]
Length = 538
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 167/451 (37%), Positives = 264/451 (58%), Gaps = 31/451 (6%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE DL ++L H+Y G+L + +R+++++ T+I G A+ E L +
Sbjct: 65 GFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLF 124
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGA-SLDVGVISSLISMYSR 119
M+ D++T V+V+S+C+ L G++++ + ++ G + + + ++++ MY++
Sbjct: 125 GEMQ----NSDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAK 180
Query: 120 CGCLDDSVKTFLEC--EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
CG +D +++ F +++SMIA HG GE AI +F ++ + ++VTFV
Sbjct: 181 CGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFV 240
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
+L AC H GL E+G + F+ M Y KP++EHY C+VDLLGR G L+EA L++ MP
Sbjct: 241 GVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPF 300
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEF 297
+AN++IW+ LLSAC+TH + + +++L + Q A YVLLSNI A A +W+ +
Sbjct: 301 EANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLSNILADANQWEEARQV 360
Query: 298 REAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDT 357
R+ M + ++K PG S++E+ +H+F DKSHP+ EI+L L+++ +K GYVP+T
Sbjct: 361 RKVMEDHGIRKPPGWSYIELGGAIHRFVASDKSHPQGKEIELMLKDMAMRLKSAGYVPNT 420
Query: 358 GADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FK 398
M D+D EEKE + +HSEKLA+AF GL+ P FK
Sbjct: 421 AQVMFDIDEEEKESVVSYHSEKLALAF-----GLMYCSPTDTIRIVKNLRICADCHKAFK 475
Query: 399 YISEIKNREIIVRDASRFHHFRNGKCSCGDY 429
+SEI REI VRD RFHHFRNG CSC D+
Sbjct: 476 LVSEIYGREITVRDTMRFHHFRNGSCSCMDF 506
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 118/241 (48%), Gaps = 8/241 (3%)
Query: 40 WITLIAGKAQNGLAEDVLDQYNLMRMVGFRP-DKITFVSVISSCSELATLGQGQQIHAEV 98
W T+I G +++ + + Y M G P + TF +++SC+ L++L G ++H+ +
Sbjct: 2 WNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHI 61
Query: 99 VKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAI 158
+K G D+ V ++LI +YS G L+ + F E D+V +++MI Y + E A+
Sbjct: 62 IKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESAL 121
Query: 159 NLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDL 218
LF +M+ +++VT V++L AC+ G + G + ++ V+D+
Sbjct: 122 CLFGEMQN----SDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDM 177
Query: 219 LGRCGYLDEAAALIRNMPVK-ANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDA 275
+CG +D A + R + ++ ++++ H + A + E++ G+ P +
Sbjct: 178 YAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEV 237
Query: 276 A 276
Sbjct: 238 T 238
>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 934
Score = 317 bits (813), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 164/444 (36%), Positives = 250/444 (56%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFEL+ SSL MY + G L + ++ +N W +++ A G E+ L
Sbjct: 491 GFELETFVQSSLITMYAQCGDLNTSNYIFDVLANKNSSTWNAILSANAHYGPGEEALKLI 550
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
MR G D+ +F + L L +GQQ+H+ ++K G + V+++ + MY +C
Sbjct: 551 IKMRNDGIHLDQFSFSVAHAIIGNLTLLDEGQQLHSLIIKHGFESNDYVLNATMDMYGKC 610
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +DD + + W+ +I+A HG ++A F +M + VTFVSLL
Sbjct: 611 GEIDDVFRILPQPRSRSQRSWNILISALARHGFFQQAREAFHEMLDLGLRPDHVTFVSLL 670
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL ++G+ +F M K+ +EH C++DLLGR G L EA I MPV
Sbjct: 671 SACSHGGLVDEGLAYFSSMSTKFGVPTGIEHCVCIIDLLGRAGKLTEAENFINKMPVPPT 730
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
++W++LL+ACK H + ++A + A+ + ++ D + YVL SN+ AS +RW+ V R+
Sbjct: 731 DLVWRSLLAACKIHGNLELARKAADRLFELDSSDDSAYVLYSNVCASTRRWRDVENVRKQ 790
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M N+KK+P SW+++KNQV F MGD+ HP++ EI LEEL ++ GY+PDT
Sbjct: 791 MESHNIKKKPACSWVKLKNQVTTFGMGDQYHPQNAEIYAKLEELKKIIREAGYMPDTSYS 850
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNR 406
+ D D E+KE+NL +HSE++A+AF + G + + FK +S+I R
Sbjct: 851 LQDTDEEQKEHNLWNHSERIALAFGLINSSEGSPLRIFKNLRVCGDCHSVFKMVSQIIGR 910
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
+II+RDA RFHHF +GKCSC DYW
Sbjct: 911 KIILRDAYRFHHFSSGKCSCSDYW 934
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 140/286 (48%), Gaps = 7/286 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +L+ G++L MY K GS+ ++V ++MP R+ + W LI G A N ++ +
Sbjct: 389 GLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGHADNKEPNAAIEAF 448
Query: 61 NLMRMVGFRPDKITFVSVISS-CSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
NL+R G + IT V+++S+ S L G IHA +V AG L+ V SSLI+MY++
Sbjct: 449 NLLREEGVPVNYITIVNLLSAFLSPDDLLDHGMPIHAHIVVAGFELETFVQSSLITMYAQ 508
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG L+ S F + W+++++A +G GEEA+ L +M + +F
Sbjct: 509 CGDLNTSNYIFDVLANKNSSTWNAILSANAHYGPGEEALKLIIKMRNDGIHLDQFSFSVA 568
Query: 180 LYACSHCGLKEKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+ L ++G + L++K + + + T +D+ G+CG +D+ ++ P
Sbjct: 569 HAIIGNLTLLDEGQQLHSLIIKHGFESNDYVLNAT--MDMYGKCGEIDDVFRILPQ-PRS 625
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLS 282
+ W L+SA H A E+ LG+ P LLS
Sbjct: 626 RSQRSWNILISALARHGFFQQAREAFHEMLDLGLRPDHVTFVSLLS 671
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 121/254 (47%), Gaps = 10/254 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D+ G+SL H Y G + E + V + + N+++W +L+ G A NG ++V+ Y
Sbjct: 89 GLACDVFVGTSLLHFYGTFGWVAEVDMVFKEIEEPNIVSWTSLMVGYAYNGCVKEVMSVY 148
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+R G ++ +VI SC L G Q+ V+K+G V V +SLISM+ C
Sbjct: 149 RRLRRDGVYCNENAMATVIRSCGVLVDKMLGYQVLGSVIKSGLDTTVSVANSLISMFGNC 208
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
++++ F + + D + W+S+I A +G E+++ F QM + + +T +LL
Sbjct: 209 DSIEEASCVFDDMKERDTISWNSIITASVHNGHCEKSLEYFSQMRYTHAKTDYITISALL 268
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLL----GRCGYLDEAAALIRNMP 236
C G ++VK LE CV + L + G ++A + M
Sbjct: 269 PVCGSAQNLRWGRGLHGMVVKS-----GLESNVCVCNSLLSMYSQAGKSEDAEFVFHKMR 323
Query: 237 VKANAIIWKTLLSA 250
+ + I W +++++
Sbjct: 324 ER-DLISWNSMMAS 336
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 122/260 (46%), Gaps = 5/260 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + + +SL M+ S+ E V M R+ I+W ++I NG E L+ +
Sbjct: 190 GLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGHCEKSLEYF 249
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ MR + D IT +++ C L G+ +H VVK+G +V V +SL+SMYS+
Sbjct: 250 SQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQA 309
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +D+ F + D++ W+SM+A++ +G A+ L +M Q N VTF + L
Sbjct: 310 GKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTAL 369
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC + + F L+ + L +V + G+ G + A + + MP + +
Sbjct: 370 SACYNLETLKIVHAFVILLGLHH----NLIIGNALVTMYGKFGSMAAAQRVCKIMPDR-D 424
Query: 241 AIIWKTLLSACKTHKSTDMA 260
+ W L+ +K + A
Sbjct: 425 EVTWNALIGGHADNKEPNAA 444
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 116/237 (48%), Gaps = 3/237 (1%)
Query: 15 MYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKIT 74
MY K GS+ + V MP RN +W L++G + G + + + M G RP
Sbjct: 1 MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYV 60
Query: 75 FVSVISSCSELATLGQGQ-QIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLEC 133
S++++C + +G Q+HA V+K G + DV V +SL+ Y G + + F E
Sbjct: 61 AASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEI 120
Query: 134 EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGM 193
E ++V W+S++ Y ++G +E ++++ ++ + N+ +++ +C K G
Sbjct: 121 EEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGY 180
Query: 194 EFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+ ++K + ++ + G C ++EA+ + +M + + I W ++++A
Sbjct: 181 QVLGSVIKS-GLDTTVSVANSLISMFGNCDSIEEASCVFDDMKER-DTISWNSIITA 235
>gi|357519251|ref|XP_003629914.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523936|gb|AET04390.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 317 bits (813), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 168/441 (38%), Positives = 253/441 (57%), Gaps = 14/441 (3%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
LD +SL Y + + KV +NV+ W L+ G N + L+ ++ M
Sbjct: 287 LDEFVSASLVTFYASCKRMGDACKVFGETVCKNVVVWTALLTGCGLNDKHVEALEVFSEM 346
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
P++ +F S ++SC L L +G+ IHA +K G V +SL+ MYS+CG +
Sbjct: 347 MRFNVVPNESSFTSALNSCVGLEDLEKGRVIHAAGIKMGLENAVYTGNSLVVMYSKCGFI 406
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
D++ F +VV W+S+I HG G A+ LF++M ++ E++++T LL AC
Sbjct: 407 GDALCVFKGICEKNVVSWNSVIVGCAQHGCGTWALVLFKEMLREGVESDEITLTGLLSAC 466
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
S G+ +K FF +K K +EHY C+VD+LGRCG ++EA AL +MPV+AN+++
Sbjct: 467 SRSGMLQKARCFFGYFARKRSMKLTVEHYACMVDVLGRCGEVEEAEALATSMPVEANSMV 526
Query: 244 WKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
W LLSAC+ H S D+A R A+ I + P +A YVLLSN++AS++RW V+ R M+
Sbjct: 527 WLVLLSACRVHSSLDVAERAAKRIFEMEPDCSAAYVLLSNLYASSRRWLEVARIRMKMKH 586
Query: 304 RNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHD 363
+ K+PG SW+ +K H+F D+SHP + EI L L +++ GY+PD +HD
Sbjct: 587 NGIVKQPGSSWITLKGMRHEFLSADRSHPLTEEIYEKLVWLGVKLRELGYIPDQQFALHD 646
Query: 364 MDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNREII 409
++ E+ E L +HSE+LAIAF G + + +++I NREI+
Sbjct: 647 VEIEQNEEMLSYHSERLAIAFGLLSTVEGSTITIMKNLRVCGDCHTAITLMAKIVNREIV 706
Query: 410 VRDASRFHHFRNGKCSCGDYW 430
VRD+SRFHHF+NG CSCGDYW
Sbjct: 707 VRDSSRFHHFKNGICSCGDYW 727
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 145/310 (46%), Gaps = 11/310 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ +++ + Y +G + + ++ MP R+VI+W ++I G +NG + L +
Sbjct: 184 DVATWNAMVNGYCNNGRVNDALRLFCQMPSRDVISWTSIIVGLDRNGKSYQAL--FFFKN 241
Query: 65 MVGFRPDKI---TFVSVISSCSELATLGQGQQIHAEVVKAG--ASLDVGVISSLISMYSR 119
MVGF I T V +S+ +++ G QIH + K G LD V +SL++ Y+
Sbjct: 242 MVGFSGVGISSTTLVCGLSAAAKILDFYAGIQIHCCMFKFGFCCGLDEFVSASLVTFYAS 301
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
C + D+ K F E +VV+W++++ G + K EA+ +F +M + N+ +F S
Sbjct: 302 CKRMGDACKVFGETVCKNVVVWTALLTGCGLNDKHVEALEVFSEMMRFNVVPNESSFTSA 361
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L +C EKG +K + VV + +CG++ +A + + + K
Sbjct: 362 LNSCVGLEDLEKGRVIHAAGIKMGLENAVYTGNSLVV-MYSKCGFIGDALCVFKGICEK- 419
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEF 297
N + W +++ C H A + +E+L GV + LLS S + F
Sbjct: 420 NVVSWNSVIVGCAQHGCGTWALVLFKEMLREGVESDEITLTGLLSACSRSGMLQKARCFF 479
Query: 298 REAMRERNVK 307
R+R++K
Sbjct: 480 GYFARKRSMK 489
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 84/173 (48%), Gaps = 8/173 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E + G+SL MY K G + + V + + +NV++W ++I G AQ+G L +
Sbjct: 385 GLENAVYTGNSLVVMYSKCGFIGDALCVFKGICEKNVVSWNSVIVGCAQHGCGTWALVLF 444
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVV-KAGASLDVGVISSLISMYSR 119
M G D+IT ++S+CS L + + K L V + ++ + R
Sbjct: 445 KEMLREGVESDEITLTGLLSACSRSGMLQKARCFFGYFARKRSMKLTVEHYACMVDVLGR 504
Query: 120 CGCLD--DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFE 170
CG ++ +++ T + E + +V W +++A H ++++ E+ ++ FE
Sbjct: 505 CGEVEEAEALATSMPVEANSMV-WLVLLSACRVH----SSLDVAERAAKRIFE 552
>gi|357124715|ref|XP_003564043.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Brachypodium distachyon]
Length = 599
Score = 317 bits (813), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 157/447 (35%), Positives = 263/447 (58%), Gaps = 24/447 (5%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
+LD+V+ +++ + G + + K+ MP RN+I+W +I+G + G D L+ ++
Sbjct: 158 DLDVVSWTTMVGGLCRLGLVDDARKLFDGMPERNLISWNAMISGYVKAGRFLDALEVFDQ 217
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
MR +G + S + +C+ L +G+++H V ++G ++D + ++++ MY +CG
Sbjct: 218 MRALGIEGNGFVAASAVVACTGAGVLARGREVHRWVEQSGITMDEKLATAVVDMYCKCGS 277
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
++++ F + W+ MI HG+ ++AI LF +ME+++ +DVT V++L A
Sbjct: 278 VEEAWHVFKVLPTKGLTSWNCMIGGLAVHGRCKDAIELFHEMEREDVAPDDVTLVNVLTA 337
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
C+H G+ G +F+ +V++Y +P++EHY C+VDL GR G LDEA +I +MP++ +
Sbjct: 338 CAHTGMVSDGHNYFNYIVQRYGIEPKMEHYGCMVDLFGRAGLLDEAKKVIDDMPMEPDIG 397
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMR 302
+ L ACK H+ D+ I ++ ++PQ++ YVLL+N+ ASA +W V++ R M
Sbjct: 398 VLGALFGACKIHRDLDLGEAIGWRVIELDPQNSGRYVLLANLLASAGQWVDVAKVRRLMD 457
Query: 303 ERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMH 362
ERNV KE G S +EI +V +F G H + EI ++++ +++L GY+PDT +H
Sbjct: 458 ERNVSKEAGRSVIEIDGEVCEFQCGSLCHAQEKEIFAAVKDMMRKIRLEGYMPDTSDVLH 517
Query: 363 DMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEI 403
D+ EEKE L++HSEKLAIAF GL+ P K+IS +
Sbjct: 518 DITEEEKEVPLQYHSEKLAIAF-----GLLRTRPGDTVRITKNLRVCRDCHEATKFISRV 572
Query: 404 KNREIIVRDASRFHHFRNGKCSCGDYW 430
REI+VRD +RFHHF++G CSC DYW
Sbjct: 573 FEREIVVRDRNRFHHFKDGTCSCRDYW 599
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 65/131 (49%), Gaps = 1/131 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +D +++ MY K GS+ E V +++P + + +W +I G A +G +D ++ +
Sbjct: 257 GITMDEKLATAVVDMYCKCGSVEEAWHVFKVLPTKGLTSWNCMIGGLAVHGRCKDAIELF 316
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVV-KAGASLDVGVISSLISMYSR 119
+ M PD +T V+V+++C+ + G +V + G + ++ ++ R
Sbjct: 317 HEMEREDVAPDDVTLVNVLTACAHTGMVSDGHNYFNYIVQRYGIEPKMEHYGCMVDLFGR 376
Query: 120 CGCLDDSVKTF 130
G LD++ K
Sbjct: 377 AGLLDEAKKVI 387
>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1134
Score = 317 bits (813), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 165/416 (39%), Positives = 258/416 (62%), Gaps = 15/416 (3%)
Query: 30 RLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLG 89
R+ R+ ++W ++I+G +G+ +D M G + D TF +V+S+C+ +ATL
Sbjct: 719 RMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLE 778
Query: 90 QGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYG 149
+G ++HA V+A DV V S+L+ MY++CG +D + + F ++ W+SMI+ Y
Sbjct: 779 RGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYA 838
Query: 150 FHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRL 209
HG G++A+ +F +M+Q + VTFV +L ACSH GL ++G + F M + Y PR+
Sbjct: 839 RHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRI 898
Query: 210 EHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSAC--KTHKSTDMAGRIAEEI 267
EH++C+VDLLGR G + + I+ MP+ N +IW+T+L AC ++T++ R A+ +
Sbjct: 899 EHFSCMVDLLGRAGDVKKIEDFIKTMPMDPNILIWRTVLGACCRANGRNTELGQRAAKML 958
Query: 268 LGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMG 327
+ + PQ+A YVLLSN+HA+ W+ V E R AMR+ VKK+ G SW+ +K+ VH F G
Sbjct: 959 IELEPQNAVNYVLLSNMHAAGGNWEDVVEARLAMRKAAVKKDAGCSWVNMKDGVHLFVAG 1018
Query: 328 DKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFAEH 387
D++HP +I L+EL ++++ GYVP+T ++D++ E KE L +HSEKLAIAF
Sbjct: 1019 DQTHPEKEKIYEKLKELMNKIRDAGYVPETKYALYDLELENKEELLSYHSEKLAIAFVLT 1078
Query: 388 TRGLIVM-------------LPFKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+ + + FKYIS+I R+II+RD++RFHHF G CSCGDYW
Sbjct: 1079 RKSELPIRIMKNLRVCGDCHTAFKYISKIVGRQIILRDSNRFHHFGGGMCSCGDYW 1134
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 136/265 (51%), Gaps = 4/265 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQ-NGLAEDVLDQ 59
G +LD+ ++L +Y ++ S+ E +KV MP + ++W + I A+ L
Sbjct: 587 GLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKY 646
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ M G+RP+++TF++++++ S + LG G QIHA ++K + D + ++L++ Y +
Sbjct: 647 FLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGK 706
Query: 120 CGCLDDSVKTFLE-CEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
C ++D F E D V W+SMI+ Y G +A++L M Q+ + + TF +
Sbjct: 707 CEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFAT 766
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+L AC+ E+GME V+ + + +VD+ +CG +D A+ MPV+
Sbjct: 767 VLSACASVATLERGMEVHACAVRACLESDVVVG-SALVDMYAKCGKIDYASRFFELMPVR 825
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRI 263
N W +++S H A +I
Sbjct: 826 -NIYSWNSMISGYARHGHGQKALKI 849
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 129/256 (50%), Gaps = 6/256 (2%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G++L +MY K ++ V +LMP ++ ++W ++I+G N E+ + ++ M+ G
Sbjct: 494 GNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGM 553
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
P + +S +SSCS L L G+QIH E K G LDV V ++L+++Y+ +++ K
Sbjct: 554 VPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQK 613
Query: 129 TFLECEYSDVVLWSSMIAAYG-FHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCG 187
F + D V W+S I A + +A+ F +M Q + N VTF+++L A S
Sbjct: 614 VFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFS 673
Query: 188 LKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTL 247
+ G + L++ KY ++ G+C +++ + M + + + W ++
Sbjct: 674 VLGLGHQIHALIL-KYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSM 732
Query: 248 LS----ACKTHKSTDM 259
+S + HK+ D+
Sbjct: 733 ISGYLHSGILHKAMDL 748
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 134/277 (48%), Gaps = 13/277 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D+ ++L ++Y++ G+LV K+ MP +N+++W LI+G QN + ++ +
Sbjct: 170 GFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRMPDEACSLF 229
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLG--QGQQIHAEVVKAGASLDVGVISSLISMYS 118
+ G P+ S + +C + + G G QIHA + K D+ + + L+SMYS
Sbjct: 230 KGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSNVLMSMYS 289
Query: 119 RC-GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFE----AND 173
C G +DD+ + F E ++ + V W+S+I+ Y G A LF M+ + E N+
Sbjct: 290 DCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNE 349
Query: 174 VTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY---TCVVDLLGRCGYLDEAAA 230
T SL+ A C L + G+ + M+ + + L + +V+ R G +D A
Sbjct: 350 YTLCSLVTAA--CSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKM 407
Query: 231 LIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEI 267
+ + M NA+ L+ + A ++ +E+
Sbjct: 408 IFKQM-YDRNAVTMNGLMVGLARQHQGEEAAKVFKEM 443
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 126/257 (49%), Gaps = 13/257 (5%)
Query: 5 DLVAGSSLAHMYMK-SGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
D++ + L MY SGS+ + +V + RN + W ++I+ + G A +++M
Sbjct: 277 DMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVM 336
Query: 64 RMVG----FRPDKITFVSVISSCSELATLGQG--QQIHAEVVKAGASLDVGVISSLISMY 117
+M G RP++ T S++++ LA G +Q+ + K+G D+ V S+L++ +
Sbjct: 337 QMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGF 396
Query: 118 SRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
+R G +D + F + + V + ++ +GEEA +F++M+ E N + V
Sbjct: 397 ARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDL-VEINSESLV 455
Query: 178 SLLYACSH-CGLKE---KGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIR 233
LL + LKE KG E + + R+ +V++ G+C +D A ++ +
Sbjct: 456 VLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQ 515
Query: 234 NMPVKANAIIWKTLLSA 250
MP K + + W +++S
Sbjct: 516 LMPSK-DTVSWNSMISG 531
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 81/150 (54%), Gaps = 6/150 (4%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
E D+V GS+L MY K G + + LMP+RN+ +W ++I+G A++G + L +
Sbjct: 792 LESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFT 851
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSRC 120
M+ G PD +TFV V+S+CS + + +G + + + G S + S ++ + R
Sbjct: 852 RMKQHGQSPDHVTFVGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDLLGRA 911
Query: 121 G---CLDDSVKTFLECEYSDVVLWSSMIAA 147
G ++D +KT ++++W +++ A
Sbjct: 912 GDVKKIEDFIKTMP--MDPNILIWRTVLGA 939
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 100/194 (51%), Gaps = 10/194 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF DL GS+L + + + G + + + + M RN + L+ G A+ E+ +
Sbjct: 381 GFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVF 440
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQG----QQIHAEVVKAG---ASLDVGVISSL 113
M+ + + + V ++S+ +E + L +G Q++HA + ++G A + +G ++L
Sbjct: 441 KEMKDL-VEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIG--NAL 497
Query: 114 ISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEAND 173
++MY +C +D++ F D V W+SMI+ + + EEA++ F M++ ++
Sbjct: 498 VNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSN 557
Query: 174 VTFVSLLYACSHCG 187
+ +S L +CS G
Sbjct: 558 FSVISTLSSCSSLG 571
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 79/176 (44%), Gaps = 23/176 (13%)
Query: 86 ATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMI 145
++L +H ++ K G + DV ++LI++Y R G L + K F E ++V WS +I
Sbjct: 154 SSLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLI 213
Query: 146 AAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK--EKGMEFFDLMVKKY 203
+ Y + +EA +LF+ + N S L AC CG + GM+ + K
Sbjct: 214 SGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICK-- 271
Query: 204 RRKPRLEHYTCVVDLL---------GRC-GYLDEAAALIRNMPVKANAIIWKTLLS 249
CV D++ C G +D+A + + + N++ W +++S
Sbjct: 272 --------LPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFR-NSVTWNSIIS 318
>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 317 bits (813), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 163/444 (36%), Positives = 248/444 (55%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFELD SSL MY + G L + ++ +N W + + A G E+ L
Sbjct: 682 GFELDTYVQSSLITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFI 741
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
MR G D+ +F +++ L L +GQQ+H+ ++K G LD V+++ + MY +C
Sbjct: 742 ARMRNDGVDLDQFSFSVALATIGNLTVLDEGQQLHSWIIKLGFELDEYVLNATMDMYGKC 801
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +DD + + W+ +I+A HG +A F +M + + VTFVSLL
Sbjct: 802 GEIDDVFRILPIPKIRSKRSWNILISALARHGFFRQATEAFHEMLDLGLKPDHVTFVSLL 861
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL ++G+ +F M ++ +EH C++DLLGR G L EA I MPV N
Sbjct: 862 SACSHGGLVDEGLVYFSSMTSEFGVPTAIEHCVCIIDLLGRSGRLAEAEGFIDKMPVPPN 921
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+W++LL+ACK H + ++ + A+ + +N D + YVL SN+ AS +RW V R+
Sbjct: 922 EFVWRSLLAACKVHGNLELGRKAADRLFELNSSDDSAYVLYSNVCASTQRWGDVENVRKQ 981
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M +++KK+P SW+++KN+V F MGD+ HP+S +I LEEL + G++PDT
Sbjct: 982 MESQSLKKKPACSWIKLKNKVMTFGMGDQFHPQSAQIYAKLEELRKMTREEGHMPDTSYA 1041
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNR 406
+ D D E+KE+NL +HSE++A+AF G + + FK +S+I R
Sbjct: 1042 LQDTDEEQKEHNLWNHSERIALAFGLINSAEGSPLRIFKNLRVCGDCHSVFKLVSKIVGR 1101
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
+I+VRD+ RFHHF GKCSC DYW
Sbjct: 1102 KIVVRDSYRFHHFHGGKCSCSDYW 1125
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 138/283 (48%), Gaps = 9/283 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
+L+ G++L MY K G + E +KV ++MP R+V+ W LI G A + + +NLMR
Sbjct: 584 NLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFNLMR 643
Query: 65 MVGFRPDKITFVSVISSC-SELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
G + IT V+++ +C S L G IHA +V AG LD V SSLI+MY++CG L
Sbjct: 644 REGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFELDTYVQSSLITMYAQCGDL 703
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
+ S F + W+++ +A +G GEEA+ +M + + +F L
Sbjct: 704 NTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQFSFSVALATI 763
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHY--TCVVDLLGRCGYLDEAAALIRNMPVKANA 241
+ + ++G + ++K L+ Y +D+ G+CG +D+ ++ +P +
Sbjct: 764 GNLTVLDEGQQLHSWIIK---LGFELDEYVLNATMDMYGKCGEIDDVFRILP-IPKIRSK 819
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLS 282
W L+SA H A E+ LG+ P LLS
Sbjct: 820 RSWNILISALARHGFFRQATEAFHEMLDLGLKPDHVTFVSLLS 862
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 117/242 (48%), Gaps = 5/242 (2%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
+SL M+ S+ E +V M R+ I+W ++I A NG E+ L + MR
Sbjct: 389 ANSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHP 448
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
+ D IT +++ +C L G+ +H + K+G +V V +SL+SMY++ G +D+
Sbjct: 449 KTDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAEL 508
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F D++ W+SM+A++ GK AI L +M + N VTF + L AC +
Sbjct: 509 VFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNL-- 566
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
+ ++ V + L +V + G+ G +DEA + + MP + + + W L+
Sbjct: 567 --EKLKIVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPER-DVVTWNALI 623
Query: 249 SA 250
Sbjct: 624 GG 625
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 123/255 (48%), Gaps = 11/255 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G ++ G+SL H Y GS+ E K+ + N+++W +L+ A NG ++VL+ Y
Sbjct: 279 GLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIY 338
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGA-SLDVGVISSLISMYSR 119
+R G T +VI +C G QI +V+K+G + V V +SLISM+
Sbjct: 339 RHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGN 398
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
++++ + F + D + W+S+I A +G+ EE++ F M + + + +T +L
Sbjct: 399 YDSVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISAL 458
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLL----GRCGYLDEAAALIRNM 235
L AC + G L+ K LE CV + L + G ++A + M
Sbjct: 459 LPACGSAQHLKWGRGLHGLITKS-----GLESNVCVCNSLLSMYAQAGSSEDAELVFHTM 513
Query: 236 PVKANAIIWKTLLSA 250
P + + I W +++++
Sbjct: 514 PAR-DLISWNSMMAS 527
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 113/242 (46%), Gaps = 2/242 (0%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L +MY K GS+ + V M RN +W +I+G + G + + M G
Sbjct: 186 NTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVRVGWYHKAMQFFCHMFENGVT 245
Query: 70 PDKITFVSVISSCSELATLGQG-QQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
P S++++C + +G +QIH VVK G +V V +SL+ Y G + ++ K
Sbjct: 246 PSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANK 305
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F E E ++V W+S++ Y +G +E +N++ + T +++ C G
Sbjct: 306 LFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGD 365
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
K G + ++K + ++ + G ++EA+ + NM + + I W +++
Sbjct: 366 KTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQER-DTISWNSII 424
Query: 249 SA 250
+A
Sbjct: 425 TA 426
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 125/254 (49%), Gaps = 12/254 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E ++ +SL MY ++GS + E V MP R++I+W +++A ++G +
Sbjct: 482 GLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGKYSHAI--L 539
Query: 61 NLMRMVGFRP--DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
L+ M+ R + +TF + +S+C L L + +HA V+ ++ + ++L++MY
Sbjct: 540 LLVEMLKTRKAMNYVTFTTALSACYNLEKL---KIVHAFVIHFAVHHNLIIGNTLVTMYG 596
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+ G +D++ K DVV W+++I + I F M ++ +N +T V+
Sbjct: 597 KFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFNLMRREGLLSNYITIVN 656
Query: 179 LLYAC-SHCGLKEKGMEFF-DLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
LL C S L + GM ++V + ++ + ++ + +CG L+ ++ I ++
Sbjct: 657 LLGTCMSPDYLLKHGMPIHAHIVVAGFELDTYVQ--SSLITMYAQCGDLN-TSSYIFDVL 713
Query: 237 VKANAIIWKTLLSA 250
N+ W + SA
Sbjct: 714 ANKNSSTWNAIFSA 727
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 70/166 (42%), Gaps = 1/166 (0%)
Query: 83 SELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWS 142
SE++ G+ +HA VK + ++L++MYS+ G + + F + + W+
Sbjct: 158 SEISEGNVGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWN 217
Query: 143 SMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKK 202
+MI+ + G +A+ F M + + S++ AC G +G V K
Sbjct: 218 NMISGFVRVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVK 277
Query: 203 YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
+ T ++ G G + EA L + + N + W +L+
Sbjct: 278 CGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIE-EPNIVSWTSLM 322
>gi|302780908|ref|XP_002972228.1| hypothetical protein SELMODRAFT_97343 [Selaginella moellendorffii]
gi|300159695|gb|EFJ26314.1| hypothetical protein SELMODRAFT_97343 [Selaginella moellendorffii]
Length = 487
Score = 317 bits (813), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 169/448 (37%), Positives = 263/448 (58%), Gaps = 19/448 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E + V ++L +MY K+G L E +V R + +++++W L++ ++ L + L +
Sbjct: 41 GLESNTVVATALVNMYGKAGCLDEATRVFRGLERKDLVSWTALMSAYSREDLYREALQLF 100
Query: 61 NLMRMVGF---RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVIS-SLISM 116
M + G +PD+ F ++ +C+ L+ +G+ H + + G GV+ +I+M
Sbjct: 101 REMTLHGLDGTKPDRSYFAFLLQACATLSAAAEGRLAHRRIQECGYDSSDGVLGLGIINM 160
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
Y +CG L + + F D V W+++I+ Y HG EE++ +F +M+Q + + V+
Sbjct: 161 YGKCGNLRAAHEVFDGMSERDTVAWTTIISGYAHHGHSEESLLMFWRMQQDGSKPDGVSL 220
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
+ +L CSH GL E+G +FF + K++ +P +HY C++DLLGR G L+ A +IR MP
Sbjct: 221 LCVLSVCSHAGLVEQGWDFFLDITKEFGVEPGEKHYGCMIDLLGRSGDLEAAEVMIRRMP 280
Query: 237 VKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSE 296
+A A+ W L+ACK H T+ R AE++L + P AA YV LSNI+A+A W V
Sbjct: 281 FQATAMNWAIFLAACKVHSDTERGKRAAEKVLELEPVPAA-YVSLSNIYAAAGEWDQVDR 339
Query: 297 FREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPD 356
R AM+ ++K+PG S +E+ ++VH+F GDKSHPR+ EI LE LT +M+ GYVPD
Sbjct: 340 VRSAMKAMGLQKDPGRSSIEVNSRVHEFWAGDKSHPRAAEIYGLLESLTRQMEGSGYVPD 399
Query: 357 TGADMHDMDSEEKEYNLKHHSEKLAIAF------AEHTRGLIVML--------PFKYISE 402
T + ++ E+KE L HSEKLAIAF A + +I L K++S
Sbjct: 400 TKLVLLNVSEEQKERLLCFHSEKLAIAFGLLSTPAGSSLRIIKNLRVCGDCHTAAKFVSR 459
Query: 403 IKNREIIVRDASRFHHFRNGKCSCGDYW 430
I REI +RD+ RFHHF++G CSCGDYW
Sbjct: 460 IAGREIFMRDSQRFHHFQDGHCSCGDYW 487
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 123/264 (46%), Gaps = 27/264 (10%)
Query: 63 MRMVGFRPDKITFVSVISSCS-ELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M+ G PDKI FV+ +++C LA L G+ IH+ V++AG + V ++L++MY + G
Sbjct: 1 MQQEGVLPDKICFVATLNACGGALADLRLGKLIHSCVLEAGLESNTVVATALVNMYGKAG 60
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVT---FVS 178
CLD++ + F E D+V W+++++AY EA+ LF +M + F
Sbjct: 61 CLDEATRVFRGLERKDLVSWTALMSAYSREDLYREALQLFREMTLHGLDGTKPDRSYFAF 120
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC-------VVDLLGRCGYLDEAAAL 231
LL AC+ +G +RR + + ++++ G+CG L A +
Sbjct: 121 LLQACATLSAAAEGR-------LAHRRIQECGYDSSDGVLGLGIINMYGKCGNLRAAHEV 173
Query: 232 IRNMPVKANAIIWKTLLSACKTHKSTD----MAGRIAEEILGVNPQDAAPYVLLSNIHAS 287
M + + + W T++S H ++ M R+ ++ G P + +LS +
Sbjct: 174 FDGMSER-DTVAWTTIISGYAHHGHSEESLLMFWRMQQD--GSKPDGVSLLCVLSVCSHA 230
Query: 288 AKRWQGVSEFREAMRERNVKKEPG 311
QG F + +E V EPG
Sbjct: 231 GLVEQGWDFFLDITKEFGV--EPG 252
>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 638
Score = 317 bits (813), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 162/445 (36%), Positives = 266/445 (59%), Gaps = 16/445 (3%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
+E + GSSL MY KSG + + V +P R+V+A +I+G AQ GL E+ L +
Sbjct: 194 YESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFR 253
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
+++ G + +T+ SV+++ S LA L G+Q+H+ V+++G V +++SLI MYS+CG
Sbjct: 254 QLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCG 313
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM-EQKEFEANDVTFVSLL 180
+ + + F + W++M+ Y HG E + LF+ M E+ + + + +T++++L
Sbjct: 314 NVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVL 373
Query: 181 YACSHCGLKEKGME-FFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
CSH L++ G+E F++++ K +P + HY CVVDLLGR G ++EA I+ MP
Sbjct: 374 SGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVP 433
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
A IW +LL +C+ H ++ + +++L + P++A YV+LSN++ASA +W+ + R+
Sbjct: 434 TAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAGKWEDMRNIRD 493
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M+E+ V KEPG SW+E+ VH F D +HPR E+ ++EL+ + K GYVPD
Sbjct: 494 LMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEVANKVKELSIKFKEDGYVPDLSC 553
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFA-------------EHTRGLIVMLPF-KYISEIKN 405
++D+D E+KE L HSEKLA+AF ++ R + F K++S +
Sbjct: 554 VLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGTTIRVIKNLRICVDCHSFAKFVSRLYA 613
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
R +I+RD +RFH+ G CSCGDYW
Sbjct: 614 RTVILRDKNRFHNIVGGVCSCGDYW 638
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 117/245 (47%), Gaps = 2/245 (0%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+ L +Y K L + + MP RNV++W +I+ +Q G A + L+ + M
Sbjct: 101 TRLIVLYNKCDCLGDARGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTE 160
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P+ TF ++++SC G+QIH+ +K + V SSL+ MY++ G + D+
Sbjct: 161 PNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGV 220
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F DVV +++I+ Y G EEA+ LF Q++ + +N VT+ S+L A S
Sbjct: 221 FHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAAL 280
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
G + +++ + + ++D+ +CG + A + +MP + I W +L
Sbjct: 281 NHGKQVHSHVLRS-GQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPER-TCISWNAMLV 338
Query: 250 ACKTH 254
H
Sbjct: 339 GYSKH 343
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 111/238 (46%), Gaps = 15/238 (6%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
S + H+++ S + I P N + + Q L E +L L R V F
Sbjct: 10 SHVRHLFLSPVSRYTFSRQISFSPSPN----LKTLCSSGQ--LKEALLQMAILGREVKFE 63
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
+ S+++ C + +GQ++H ++K V + + LI +Y++C CL D+
Sbjct: 64 ----GYDSILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGM 119
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F E +VV W++MI+AY G EA+NLF +M + + E N TF ++L +C
Sbjct: 120 FDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGF 179
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP----VKANAII 243
E G + + +K+ + + + ++D+ + G + +A + +P V AII
Sbjct: 180 ETGRQIHSIAIKR-NYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAII 236
>gi|302804779|ref|XP_002984141.1| hypothetical protein SELMODRAFT_119895 [Selaginella moellendorffii]
gi|300147990|gb|EFJ14651.1| hypothetical protein SELMODRAFT_119895 [Selaginella moellendorffii]
Length = 487
Score = 317 bits (812), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 169/448 (37%), Positives = 263/448 (58%), Gaps = 19/448 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E + V ++L +MY K+G L E +V R + +++++W L++ ++ L + L +
Sbjct: 41 GLESNTVVATALVNMYGKAGCLDEATRVFRGLGRKDLVSWTALMSAYSREDLYREALQLF 100
Query: 61 NLMRMVGF---RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVIS-SLISM 116
M + G +PD+ F ++ +C+ L+ +G+ H + + G GV+ +I+M
Sbjct: 101 REMTLHGLDGTKPDRSYFAFLLQACATLSAAAEGRLAHRRIQECGYDSSDGVLGLGIINM 160
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
Y +CG L + + F D V W+++I+ Y HG EE++ +F +M+Q + + V+
Sbjct: 161 YGKCGNLRAAHEVFDGMSERDTVAWTTIISGYAHHGHSEESLLMFWRMQQDGSKPDGVSL 220
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
+ +L CSH GL E+G +FF + K++ +P +HY C++DLLGR G L+ A +IR MP
Sbjct: 221 LCVLSVCSHAGLVEQGWDFFLDITKEFGVEPGEKHYGCMIDLLGRSGDLEAAEVMIRRMP 280
Query: 237 VKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSE 296
+A A+ W L+ACK H T+ R AE++L + P AA YV LSNI+A+A W V
Sbjct: 281 FQATAMNWAIFLAACKVHSDTERGKRAAEKVLELEPVPAA-YVSLSNIYAAAGEWDQVDR 339
Query: 297 FREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPD 356
R AM+ ++K+PG S +E+ ++VH+F GDKSHPR+ EI LE LT +M+ GYVPD
Sbjct: 340 VRSAMKAMGLQKDPGRSSIEVNSRVHEFWAGDKSHPRAAEIYGLLESLTRQMEGSGYVPD 399
Query: 357 TGADMHDMDSEEKEYNLKHHSEKLAIAF------AEHTRGLIVML--------PFKYISE 402
T + ++ E+KE L HSEKLAIAF A + +I L K++S
Sbjct: 400 TKLVLLNVSEEQKERLLCFHSEKLAIAFGLLSTPAGSSLRIIKNLRVCGDCHTAAKFVSR 459
Query: 403 IKNREIIVRDASRFHHFRNGKCSCGDYW 430
I REI +RD+ RFHHF++G CSCGDYW
Sbjct: 460 IAGREIFMRDSQRFHHFQDGHCSCGDYW 487
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 122/264 (46%), Gaps = 27/264 (10%)
Query: 63 MRMVGFRPDKITFVSVISSCS-ELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M+ G PDKI FV+ +++C LA L G+ IH+ V++AG + V ++L++MY + G
Sbjct: 1 MQQEGVLPDKICFVATLNACGGALADLRLGKLIHSCVLEAGLESNTVVATALVNMYGKAG 60
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVT---FVS 178
CLD++ + F D+V W+++++AY EA+ LF +M + F
Sbjct: 61 CLDEATRVFRGLGRKDLVSWTALMSAYSREDLYREALQLFREMTLHGLDGTKPDRSYFAF 120
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC-------VVDLLGRCGYLDEAAAL 231
LL AC+ +G +RR + + ++++ G+CG L A +
Sbjct: 121 LLQACATLSAAAEGR-------LAHRRIQECGYDSSDGVLGLGIINMYGKCGNLRAAHEV 173
Query: 232 IRNMPVKANAIIWKTLLSACKTHKSTD----MAGRIAEEILGVNPQDAAPYVLLSNIHAS 287
M + + + W T++S H ++ M R+ ++ G P + +LS +
Sbjct: 174 FDGMSER-DTVAWTTIISGYAHHGHSEESLLMFWRMQQD--GSKPDGVSLLCVLSVCSHA 230
Query: 288 AKRWQGVSEFREAMRERNVKKEPG 311
QG F + +E V EPG
Sbjct: 231 GLVEQGWDFFLDITKEFGV--EPG 252
>gi|357112489|ref|XP_003558041.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Brachypodium distachyon]
Length = 706
Score = 317 bits (812), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 162/414 (39%), Positives = 244/414 (58%), Gaps = 15/414 (3%)
Query: 32 MPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQG 91
M R+ W +I QN + L + M G RP+ +F+S+++ C+ LAT G
Sbjct: 293 MCARDDGTWSAMIKVYEQNEFLMEALSTFREMLCRGIRPNYTSFISILTVCAALATADYG 352
Query: 92 QQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFH 151
+++HA +++ DV +S+LI+MY +CG LD + + F E DVV+W+SMI Y H
Sbjct: 353 RELHAAMLRCSFDTDVFAVSALITMYIKCGNLDKAKRVFNMFEPKDVVMWNSMITGYAQH 412
Query: 152 GKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEH 211
G GEEA+ +F+ + + +T++ +L ACS+ G ++G E F+ M + H
Sbjct: 413 GLGEEALGIFDDLRLARMAPDGITYIGVLTACSYTGKVKEGREIFNSMGMNSSIRLGAAH 472
Query: 212 YTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVN 271
Y+C+VDLLGR G +DEA LI NMPV+ +AIIW L+ AC+ HK+ ++A A+++L +
Sbjct: 473 YSCMVDLLGRAGLVDEALDLINNMPVEPDAIIWGALMGACRMHKNAEIAEVAAKKLLELE 532
Query: 272 PQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDK-S 330
P A PYVLLS+I+ S RW+ S+ R+ + RN+ K PG SW+E VH FT GD S
Sbjct: 533 PGSAGPYVLLSHIYTSTGRWEDASDMRKFISSRNLNKSPGCSWIEYNKMVHLFTSGDVLS 592
Query: 331 HPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFA--EHT 388
HP I LEEL + GY D +HD+D E+K +L++HSE+ A+A+ +
Sbjct: 593 HPEHAIILNMLEELDGLLMESGYSADGSFVLHDVDEEQKAQSLRYHSERQAVAYGLLKVP 652
Query: 389 RGLIVML------------PFKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
G+ + + K I++I +REII+RDA+RFHHF++G CSC DYW
Sbjct: 653 AGMPIRVMKNLRVCGDCHSAIKLITKITSREIILRDANRFHHFKDGLCSCRDYW 706
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 86/158 (54%), Gaps = 2/158 (1%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F+ D+ A S+L MY+K G+L + ++V + ++V+ W ++I G AQ+GL E+ L ++
Sbjct: 364 FDTDVFAVSALITMYIKCGNLDKAKRVFNMFEPKDVVMWNSMITGYAQHGLGEEALGIFD 423
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEV-VKAGASLDVGVISSLISMYSRC 120
+R+ PD IT++ V+++CS + +G++I + + + L S ++ + R
Sbjct: 424 DLRLARMAPDGITYIGVLTACSYTGKVKEGREIFNSMGMNSSIRLGAAHYSCMVDLLGRA 483
Query: 121 GCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEA 157
G +D+++ D ++W +++ A H E A
Sbjct: 484 GLVDEALDLINNMPVEPDAIIWGALMGACRMHKNAEIA 521
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 122/272 (44%), Gaps = 29/272 (10%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+VA +++ Y ++G + E + MP RNV++W +I+G AQNG + +M
Sbjct: 173 DVVARTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGKVILARKLFEVM- 231
Query: 65 MVGFRPDK--ITFVSVISSCSELATLGQGQQIHAE----VVKAGASLDVGVISSLISMYS 118
PD+ +++ +++ +G Q H E + A V ++++ +
Sbjct: 232 -----PDRNEVSWTAML--------VGYIQAGHVEDAEDLFNAMPDHPVAACNAMMVGFG 278
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+ G +D + F D WS+MI Y + EA++ F +M + N +F+S
Sbjct: 279 QHGMVDAAKAMFERMCARDDGTWSAMIKVYEQNEFLMEALSTFREMLCRGIRPNYTSFIS 338
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+L C+ + G E M+ + + + ++ + +CG LD+A + NM
Sbjct: 339 ILTVCAALATADYGRELHAAML-RCSFDTDVFAVSALITMYIKCGNLDKAKRVF-NMFEP 396
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILGV 270
+ ++W ++++ H + EE LG+
Sbjct: 397 KDVVMWNSMITGYAQHG-------LGEEALGI 421
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 105/245 (42%), Gaps = 20/245 (8%)
Query: 6 LVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRM 65
+VA ++ +++G++ MP+R ++ LIAG +N L + L ++ M
Sbjct: 17 VVAANARIAWLVRAGNIEGARAAFDAMPLRTTASYNALIAGYFRNHLPDAALGLFHRMP- 75
Query: 66 VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVIS--SLISMYSRCGCL 123
D ++ ++I+ S L + A A L V+S SL+ Y R G L
Sbjct: 76 ---SRDLGSYNALIAGLS----LRRHTLPDAAAALASIPLPPSVVSFTSLLRGYVRHGLL 128
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
D+++ F + + V ++ ++ + G+ EA LF++M K+ V ++L
Sbjct: 129 ADAIRLFHQMPERNHVTYTVLLGGFLDAGRVNEARKLFDEMPDKDV----VARTAMLSGY 184
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
G + FD M K+ + +T ++ + G + A L MP + N +
Sbjct: 185 CQAGRITEARALFDEMPKR-----NVVSWTAMISGYAQNGKVILARKLFEVMPDR-NEVS 238
Query: 244 WKTLL 248
W +L
Sbjct: 239 WTAML 243
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 317 bits (812), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 165/449 (36%), Positives = 255/449 (56%), Gaps = 24/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G ++ +SL MY+K G+L + MP +++++W T+I G A NGL + LD +
Sbjct: 245 GMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLF 304
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ +PD T V V+S+C+ L L G + + + + + ++LI MYS+C
Sbjct: 305 FQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKC 364
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + + F + D V+W++M+ +G + +LF +E+ ++ TF+ LL
Sbjct: 365 GSVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLL 424
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
C+H G +G +FF+ M + + P +EHY C+VDLLGR G L+EA LI NMP+K N
Sbjct: 425 CGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPN 484
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A++W LL CK HK T +A ++ ++++ + P ++ YV LSNI++ RW+ + R
Sbjct: 485 AVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRST 544
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+E+ ++K SW+EI VH+F +GDKSH S +I L+EL E+K G+VP T
Sbjct: 545 MKEQQIQKIRACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDELGRELKAVGHVPTTEFV 604
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
+ D++ EEKE+ L +HSEKLA+AF GLI P K IS
Sbjct: 605 LFDIEEEEKEHFLGYHSEKLAVAF-----GLIASPPNHVIRVVKNLRVCGDCHDAIKLIS 659
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+I REII+RD +RFH F +G CSC DYW
Sbjct: 660 KITKREIIIRDTNRFHTFIDGSCSCRDYW 688
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 132/249 (53%), Gaps = 4/249 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G++ D+ +SL +Y+K + + KV +P +NV++W +I G +G + + +
Sbjct: 144 GYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAF 203
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ +G +PD + V V+++C+ L G+ I + +G +V V +SL+ MY +C
Sbjct: 204 KKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKC 263
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L+ + F D+V WS+MI Y F+G ++A++LF QM+ + + + T V +L
Sbjct: 264 GNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVL 323
Query: 181 YACSHCGLKEKGMEFFDLMVK-KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
AC+ G + G+ LM + ++ P L T ++D+ +CG + +A + M K
Sbjct: 324 SACATLGALDLGIWASSLMDRNEFLSNPVLG--TALIDMYSKCGSVTQAWEIFTAMKRK- 380
Query: 240 NAIIWKTLL 248
+ ++W ++
Sbjct: 381 DRVVWNAMM 389
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 108/215 (50%), Gaps = 2/215 (0%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
N+ W T+I G +D + Y MR GF P+ T V+ +C+ + G +IH
Sbjct: 78 NIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIH 137
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGE 155
+ +VKAG DV V +SL+S+Y +C DD++K F + +VV W+++I Y G
Sbjct: 138 SLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFR 197
Query: 156 EAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV 215
EAI F+++ + + + + V +L AC+ G G E+ D + + T +
Sbjct: 198 EAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSG-EWIDRYISDSGMGRNVFVATSL 256
Query: 216 VDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+D+ +CG L+ A + MP K + + W T++
Sbjct: 257 LDMYVKCGNLERANLIFSAMPEK-DIVSWSTMIQG 290
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 76/167 (45%), Gaps = 4/167 (2%)
Query: 85 LATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSM 144
L Q + IHA +++ D +++ ++ G + S F + + ++ LW++M
Sbjct: 26 LNFFNQLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTM 85
Query: 145 IAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKK-Y 203
I ++AI+L+ M F N+ T +L AC+ G++ L+VK Y
Sbjct: 86 IRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGY 145
Query: 204 RRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
++ T ++ L +C D+A + ++P K N + W +++
Sbjct: 146 DHDVFVK--TSLLSLYVKCDNFDDALKVFDDIPDK-NVVSWTAIITG 189
>gi|296081589|emb|CBI20594.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 317 bits (812), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 173/439 (39%), Positives = 252/439 (57%), Gaps = 17/439 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIR--NVIAWITLIAGKAQNGLAEDVLD 58
GFE +L +SL MY K+G L+ + M +R NV+ W +IAG AQN D ++
Sbjct: 122 GFESNLFVRNSLIDMYFKAGYLLLARHLFDEMFVRDRNVVCWNAMIAGYAQNEKYSDAIE 181
Query: 59 QYNLMRMVG-FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMY 117
+ +M+ G P+ +T VSV+ +C+ L L G+ I + + +L + + ++L MY
Sbjct: 182 VFRMMQQFGGVVPNDVTLVSVLPACAHLGALDLGKWIDGFISRREMALGLFLGNALADMY 241
Query: 118 SRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
++CGC+ ++ + F + E DV+ WS +I +G +EA F +M + NDV F+
Sbjct: 242 AKCGCITEARRVFNKMEERDVISWSIIICGLAMYGHADEAFGCFYEMLDCGEKPNDVVFM 301
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
LL AC+H GL +KG+ F+ M K+Y P++EHY CVVDLL R G LD+A +I +MP+
Sbjct: 302 GLLTACTHAGLVKKGLNCFNTMDKEYGVSPKVEHYGCVVDLLSRAGELDKAEDMISSMPM 361
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEF 297
K N IIW LL C+ ++ + R+ + IL ++ + YV L+N+++S R ++
Sbjct: 362 KPNVIIWGALLGGCRIYRDSGRGQRVVQHILELDSDHSGSYVYLANVYSSMGRLDDAAKC 421
Query: 298 REAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDT 357
R MRE V K PG SW+E+ N VH+F MGD SHP S +I + EL +MKL GY P T
Sbjct: 422 RLRMRENGVLKTPGCSWIEVDNTVHEFFMGDLSHPESNKIYSMIRELMWKMKLAGYKPKT 481
Query: 358 GADMHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEI 403
+H +D EEKE L HSEKLAIAF + G + + K IS I
Sbjct: 482 DLVVHSIDEEEKEDALSIHSEKLAIAFGLISTSEGTTIRVVKNLRICNDCHDAAKIISGI 541
Query: 404 KNREIIVRDASRFHHFRNG 422
REIIVRD SRFHHF++G
Sbjct: 542 VKREIIVRDRSRFHHFKDG 560
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 118/245 (48%), Gaps = 7/245 (2%)
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
PD+ TF SV+ +C+ LA + GQ+IHA V K G ++ V +SLI MY + G L +
Sbjct: 90 PDEFTFTSVLKACAGLAHVVNGQKIHAMVTKQGFESNLFVRNSLIDMYFKAGYLLLARHL 149
Query: 130 FLECEYSD--VVLWSSMIAAYGFHGKGEEAINLFEQMEQ-KEFEANDVTFVSLLYACSHC 186
F E D VV W++MIA Y + K +AI +F M+Q NDVT VS+L AC+H
Sbjct: 150 FDEMFVRDRNVVCWNAMIAGYAQNEKYSDAIEVFRMMQQFGGVVPNDVTLVSVLPACAHL 209
Query: 187 GLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKT 246
G + G ++ D + + L + D+ +CG + EA + M + + I W
Sbjct: 210 GALDLG-KWIDGFISRREMALGLFLGNALADMYAKCGCITEARRVFNKMEER-DVISWSI 267
Query: 247 LLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
++ + D A E+L G P D LL+ + +G++ F +E
Sbjct: 268 IICGLAMYGHADEAFGCFYEMLDCGEKPNDVVFMGLLTACTHAGLVKKGLNCFNTMDKEY 327
Query: 305 NVKKE 309
V +
Sbjct: 328 GVSPK 332
>gi|125547017|gb|EAY92839.1| hypothetical protein OsI_14639 [Oryza sativa Indica Group]
Length = 702
Score = 317 bits (812), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 167/445 (37%), Positives = 252/445 (56%), Gaps = 29/445 (6%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV--- 66
++L MY + G ++ ++ + +V++W TLI G G D M+ +
Sbjct: 263 NALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEG 322
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
G P+ IT ++++ C+ LA +G++IH V+ DV V S+L+ MY++CGCL S
Sbjct: 323 GVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALS 382
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQK-EFEANDVTFVSLLYACSH 185
F + + W+ +I AYG HG G EA LF++M E N+VTF++ L ACSH
Sbjct: 383 RAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSH 442
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI-IW 244
G+ ++G++ F M + + +P + CVVD+LGR G LDEA A++ +M + W
Sbjct: 443 SGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAW 502
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
T+L AC+ H++ + E +L + P++A+ YVLL NI+++A +W +E R MR R
Sbjct: 503 STMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRR 562
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
V KEPG SW+E+ +H+F G+ +HP S E+ ++E L EM RGY PDT +HDM
Sbjct: 563 GVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVARGYTPDTSCVLHDM 622
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKN 405
D +K L+ HSEKLAIAF GL+ P K++S++
Sbjct: 623 DDGDKAAVLRCHSEKLAIAF-----GLLRAAPGATIRVAKNLRVCNDCHEAAKFLSKMVG 677
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
REI++RD RFHHFRNG+CSCGDYW
Sbjct: 678 REIVLRDVRRFHHFRNGQCSCGDYW 702
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 136/312 (43%), Gaps = 11/312 (3%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPI--RNVIAWITLIAGKAQNGLAEDVLDQYNLMRM-V 66
S+L MY + + +V ++P + + W +I G AQ G+ E+ L + M
Sbjct: 159 SALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEA 218
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
GF P + T SV+ +C+ + +H VVK G + + V ++L+ MY+R G D +
Sbjct: 219 GFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVA 278
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE---FEANDVTFVSLLYAC 183
+ F + DVV W+++I G +A L +M+Q E N +T ++LL C
Sbjct: 279 RRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGC 338
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
+ +G E V ++ + + +VD+ +CG L + A+ +P + N I
Sbjct: 339 AILAAPARGKEIHGYAV-RHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLP-RRNTIT 396
Query: 244 WKTLLSACKTHKSTDMAGRIAEEILG---VNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
W L+ A H A + + + P + L+ S +G+ F
Sbjct: 397 WNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAM 456
Query: 301 MRERNVKKEPGV 312
R+ V+ P +
Sbjct: 457 ERDHGVEPTPDI 468
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 126/264 (47%), Gaps = 8/264 (3%)
Query: 10 SSLAHMYMKSGSLVEGEKVIR-LMPIR-NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVG 67
++L MY + G + + +++ P R +V+ W T+++ Q+G+ ++ + M +G
Sbjct: 55 NALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALG 114
Query: 68 FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGA-SLDVGVISSLISMYSRCGCLDDS 126
RPD +TF S + +CS L L G+++HA V+K + + V S+L+ MY+ + +
Sbjct: 115 VRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKA 174
Query: 127 VKTFLECEYS--DVVLWSSMIAAYGFHGKGEEAINLFEQME-QKEFEANDVTFVSLLYAC 183
+ F S + +W++MI Y G EEA+ LF +ME + F + T S+L AC
Sbjct: 175 RQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPAC 234
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
+ +VK+ R ++D+ R G D A I M + +
Sbjct: 235 ARSEAFAGKEAVHGYVVKRGMAGNRFVQ-NALMDMYARLGKTD-VARRIFAMVDLPDVVS 292
Query: 244 WKTLLSACKTHKSTDMAGRIAEEI 267
W TL++ C A ++A E+
Sbjct: 293 WNTLITGCVVQGHVADAFQLAREM 316
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 4/154 (2%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
+ D+ GS+L MY K G L V +P RN I W LI +GL + ++
Sbjct: 359 LDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFD 418
Query: 62 LMRMVG-FRPDKITFVSVISSCSELATLGQGQQI-HAEVVKAGASLDVGVISSLISMYSR 119
M G RP+++TF++ +++CS + +G Q+ HA G +++ ++ + R
Sbjct: 419 RMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGR 478
Query: 120 CGCLDD--SVKTFLECEYSDVVLWSSMIAAYGFH 151
G LD+ ++ T +E V WS+M+ A H
Sbjct: 479 AGRLDEAYAMVTSMEAGEQQVSAWSTMLGACRLH 512
>gi|225424252|ref|XP_002280792.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
mitochondrial [Vitis vinifera]
gi|297737690|emb|CBI26891.3| unnamed protein product [Vitis vinifera]
Length = 610
Score = 317 bits (812), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 167/446 (37%), Positives = 259/446 (58%), Gaps = 16/446 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E + L MY+K G L E + M R+++AW LIA Q G + L +
Sbjct: 165 GLEFVAAVRTELMIMYVKFGELGCAEFLFGSMVERDLVAWNALIAVCVQTGFSSKALQSF 224
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M M G +PD +T VS +S+C L L G++I+ + G ++ V ++ + M ++C
Sbjct: 225 REMGMAGIKPDSVTIVSALSACGHLGCLETGEEIYEFAREEGIDSNIIVHNARLDMCAKC 284
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +D ++ F E +V+ WS++I Y +G+ E+A+ LF +M+ + + N VTF+++L
Sbjct: 285 GDMDKAMNLFDEMPQRNVISWSTVIGGYAVNGESEKALALFSRMKNQGVQPNYVTFLAVL 344
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRR--KPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
ACSH G +G ++F+ M + + +PR EHY C+VDLLGR G+L+EA I+ MP++
Sbjct: 345 SACSHTGRVNEGWQYFNFMAQSDDKNIQPRKEHYACMVDLLGRSGHLEEAYNFIKIMPIE 404
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
A+ IW LL AC H++ + +A+ + + P+ A+ +VLLSN++A+A RW V + R
Sbjct: 405 ADPGIWGALLGACAIHQNIKLGQHVADLLFELAPEIASYHVLLSNMYAAAGRWHCVEKVR 464
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
+ M+++ +K S +E ++H GDKSHP+S I LE+L +MK GY+P+T
Sbjct: 465 QRMKKKGARKVAAYSSVEFNGEIHILYGGDKSHPQSASILAKLEDLLKQMKSMGYIPETD 524
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAFA----EHTRGLIVMLPF----------KYISEIK 404
+ HD++ EEKE L HSEKLAIAF+ + VM K +S I
Sbjct: 525 SVFHDVEDEEKESTLSTHSEKLAIAFSLINGSPKFPIRVMKNLRICGDCHTFCKLVSRIT 584
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
REII+RD +RFHHF+NG CSC D+W
Sbjct: 585 MREIIMRDKNRFHHFKNGICSCKDFW 610
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 127/275 (46%), Gaps = 8/275 (2%)
Query: 40 WITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVV 99
W T++ G +NG+ + + Y MR +G RPD TF VI +C+ELA L G +H VV
Sbjct: 103 WNTIMKGYVKNGIPDKAVSVYGKMRHLGVRPDPFTFPFVIKACAELAELWAGLGMHGHVV 162
Query: 100 KAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAIN 159
K G V + L+ MY + G L + F D+V W+++IA G +A+
Sbjct: 163 KHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSMVERDLVAWNALIAVCVQTGFSSKALQ 222
Query: 160 LFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLL 219
F +M + + VT VS L AC H G E G E ++ ++ + H +D+
Sbjct: 223 SFREMGMAGIKPDSVTIVSALSACGHLGCLETGEEIYEFAREEGIDSNIIVH-NARLDMC 281
Query: 220 GRCGYLDEAAALIRNMPVKANAIIWKTLLSA----CKTHKSTDMAGRIAEEILGVNPQDA 275
+CG +D+A L MP + N I W T++ ++ K+ + R+ + GV P
Sbjct: 282 AKCGDMDKAMNLFDEMPQR-NVISWSTVIGGYAVNGESEKALALFSRMKNQ--GVQPNYV 338
Query: 276 APYVLLSNIHASAKRWQGVSEFREAMRERNVKKEP 310
+LS + + +G F + + +P
Sbjct: 339 TFLAVLSACSHTGRVNEGWQYFNFMAQSDDKNIQP 373
>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
Length = 716
Score = 317 bits (812), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 162/414 (39%), Positives = 243/414 (58%), Gaps = 24/414 (5%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
NV++W ++IA +QNG + L+ + M++ G +P+ +T ++ +C +A L G+ H
Sbjct: 308 NVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAH 367
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGE 155
++ G DV V S+LI MY++CG + S F ++V W+S++A Y HGK
Sbjct: 368 CFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMAGYAMHGKTF 427
Query: 156 EAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV 215
EAIN+FE M++ + + V+F +L AC+ GL E+G +FD M + + + R+EHY+C+
Sbjct: 428 EAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNHGVEARMEHYSCM 487
Query: 216 VDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDA 275
V LLGR G L+EA A+I+ MP + ++ +W LLS+C+ H D+ A+ + + P++
Sbjct: 488 VTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSCRVHNRVDLGEIAAKRVFELEPRNP 547
Query: 276 APYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSM 335
Y+LLSNI+AS W V R+ MR R +KK PG SW+EIKN+VH GD SHP+
Sbjct: 548 GNYILLSNIYASKAMWVEVDMVRDMMRSRGLKKNPGYSWIEIKNKVHMLLAGDSSHPQMP 607
Query: 336 EIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVML 395
+I L +LT EMK GYVP T + D++ ++KE L HSEKLA+ GL+
Sbjct: 608 QIIEKLAKLTVEMKKSGYVPHTDFVLQDVEEQDKEQILCGHSEKLAVVL-----GLLNTK 662
Query: 396 P-------------------FKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
P K+IS+ + REI VRD +RFH F+ G CSCGDYW
Sbjct: 663 PGFPLQVIKNLRICRDCHAVIKFISDFEKREIFVRDTNRFHQFKGGVCSCGDYW 716
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 139/344 (40%), Gaps = 92/344 (26%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIR------------------------- 35
G LD V SSL HMY++ L + V +P
Sbjct: 104 GLGLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELF 163
Query: 36 ----------NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSEL 85
N+++W +I+G ++G D + + M + G +PD + SV+ + +L
Sbjct: 164 YQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDL 223
Query: 86 ATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC----------------------- 122
G QIH V+K G D V+S+LI MY +C C
Sbjct: 224 DMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALV 283
Query: 123 --------LDDSVKTFLECEYSD--VVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEAN 172
+D++++ F + + D VV W+SMIA+ +GK EA+ LF +M+ + + N
Sbjct: 284 TGLSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPN 343
Query: 173 DVTFVSLLYAC-----------SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGR 221
VT LL AC +HC G+ F D+ V + ++D+ +
Sbjct: 344 SVTIPCLLPACGNIAALLHGKAAHCFSLRNGI-FNDVYVG-----------SALIDMYAK 391
Query: 222 CGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAE 265
CG + A+ L +M N + W +L++ H T A I E
Sbjct: 392 CGRM-LASRLCFDMMPNRNLVSWNSLMAGYAMHGKTFEAINIFE 434
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 87/168 (51%), Gaps = 6/168 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ GS+L MY K G ++ +MP RN+++W +L+AG A +G + ++ + LM+
Sbjct: 378 DVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMAGYAMHGKTFEAINIFELMQ 437
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSRCGCL 123
G +PD ++F V+S+C++ +G + + G + S ++++ R G L
Sbjct: 438 RCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNHGVEARMEHYSCMVTLLGRSGRL 497
Query: 124 DDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFE 170
+++ + + D +W +++++ H + ++L E ++ FE
Sbjct: 498 EEAYAMIKQMPFEPDSCVWGALLSSCRVHNR----VDLGEIAAKRVFE 541
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%)
Query: 56 VLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLIS 115
V+ ++ M G PD +VI +C+ L+ L G+Q+H + +G LD V+SSL+
Sbjct: 58 VIRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLLH 117
Query: 116 MYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVT 175
MY + L D+ F + VV S++I+ + G+ +E LF Q E N V+
Sbjct: 118 MYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVELNLVS 177
Query: 176 FVSLLYACSHCG 187
+ ++ + G
Sbjct: 178 WNGMISGFNRSG 189
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 317 bits (812), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 166/451 (36%), Positives = 252/451 (55%), Gaps = 26/451 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF +L ++L Y K G + + + ++VI+W LI G L ++ L +
Sbjct: 225 GFGSNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLF 284
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVK--AGASLDVGVISSLISMYS 118
M G P+ +T +S++ +C+ L + G+ IH + K G + + +SLI MYS
Sbjct: 285 QEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYS 344
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+CG ++ + + F + + W++MI + HG+ A ++F +M + E + +D+TFV
Sbjct: 345 KCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVG 404
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
LL ACSH G+ + G F M Y+ P+LEHY C++DLLG G EA +I M ++
Sbjct: 405 LLSACSHAGMLDLGRHIFRSMTHNYKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTME 464
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
+ +IW +LL ACK H + ++ + A+ + + P + YVLLSNI+A+A RW V+ R
Sbjct: 465 PDGVIWCSLLKACKMHGNVELGEKFAQNLFKIEPNNPGSYVLLSNIYATAGRWNEVARIR 524
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
+ ++ +KK PG S +EI + VH+F +GDK HPR+ EI LEE+ ++ G+VPDT
Sbjct: 525 GLLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLQEAGFVPDTS 584
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKY 399
+ +M+ E KE L+HHSEKLAIAF GLI P K
Sbjct: 585 EVLQEMEEEFKEGALRHHSEKLAIAF-----GLISTKPETKLTIVKNLRVCRNCHEATKL 639
Query: 400 ISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
IS+I REII RD +RFHHFR+G CSC DYW
Sbjct: 640 ISKIYKREIIARDRTRFHHFRDGVCSCNDYW 670
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 142/283 (50%), Gaps = 8/283 (2%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+V+ ++L Y G + + +P+++V++W +I+G + G ++ L+ + M
Sbjct: 128 DVVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMM 187
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
RPD+ T V+VIS+ + ++ G+Q+H+ + G ++ ++++LI YS+CG ++
Sbjct: 188 KTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEME 247
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ FL Y DV+ W+ +I Y +EA+ LF++M + NDVT +S+L+AC+
Sbjct: 248 TACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACA 307
Query: 185 HCGLKEKGM---EFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
H G + G + D +K L T ++D+ +CG + EAA + N + +
Sbjct: 308 HLGAIDIGRWIHVYIDKRLKGVTNASSLR--TSLIDMYSKCGDI-EAAHQVFNSMLHKSL 364
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILG--VNPQDAAPYVLLS 282
W ++ H + A I + + P D LLS
Sbjct: 365 PAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLS 407
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 125/286 (43%), Gaps = 38/286 (13%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
N++ W T+ G A + L Y M +G P+ TF ++ SC++L +G QIH
Sbjct: 27 NLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKLKASKEGLQIH 86
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT-------------------------- 129
V+K G LD+ V +SLISMY + L+D+ K
Sbjct: 87 GHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTALVTGYASRGYIE 146
Query: 130 -----FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
F E DVV W++MI+ Y G +EA+ LF++M + ++ T V+++ A +
Sbjct: 147 SARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTMVTVISASA 206
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
G E G + + + L+ ++D +CG ++ A L + K + I W
Sbjct: 207 RSGSIELGRQVHS-WIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSYK-DVISW 264
Query: 245 KTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASA 288
L+ A + +E+L G +P D +LS +HA A
Sbjct: 265 NILIGGYTHLNLYKEALLLFQEMLRSGESPNDVT---MLSILHACA 307
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 317 bits (812), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 165/449 (36%), Positives = 255/449 (56%), Gaps = 24/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G ++ +SL MY+K G+L + MP +++++W T+I G A NGL + LD +
Sbjct: 245 GMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLF 304
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ +PD T V V+S+C+ L L G + + + + + ++LI MYS+C
Sbjct: 305 FQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKC 364
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + + F + D V+W++M+ +G + +LF +E+ ++ TF+ LL
Sbjct: 365 GSVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLL 424
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
C+H G +G +FF+ M + + P +EHY C+VDLLGR G L+EA LI NMP+K N
Sbjct: 425 CGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPN 484
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A++W LL CK HK T +A ++ ++++ + P ++ YV LSNI++ RW+ + R
Sbjct: 485 AVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRST 544
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+E+ ++K SW+EI VH+F +GDKSH S +I L+EL E+K G+VP T
Sbjct: 545 MKEQQIQKIRACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDELGRELKAVGHVPTTEFV 604
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
+ D++ EEKE+ L +HSEKLA+AF GLI P K IS
Sbjct: 605 LFDIEEEEKEHFLGYHSEKLAVAF-----GLIASPPNHVIRVVKNLRVCGDCHDAIKLIS 659
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+I REII+RD +RFH F +G CSC DYW
Sbjct: 660 KITKREIIIRDTNRFHTFIDGSCSCRDYW 688
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 132/249 (53%), Gaps = 4/249 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G++ D+ +SL +Y+K + + KV +P +NV++W +I G +G + + +
Sbjct: 144 GYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAF 203
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ +G +PD + V V+++C+ L G+ I + +G +V V +SL+ MY +C
Sbjct: 204 KKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKC 263
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L+ + F D+V WS+MI Y F+G ++A++LF QM+ + + + T V +L
Sbjct: 264 GNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVL 323
Query: 181 YACSHCGLKEKGMEFFDLMVK-KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
AC+ G + G+ LM + ++ P L T ++D+ +CG + +A + M K
Sbjct: 324 SACATLGALDLGIWASSLMDRNEFLSNPVLG--TALIDMYSKCGSVTQAWEIFTAMK-KK 380
Query: 240 NAIIWKTLL 248
+ ++W ++
Sbjct: 381 DRVVWNAMM 389
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 108/215 (50%), Gaps = 2/215 (0%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
N+ W T+I G +D + Y MR GF P+ T V+ +C+ + G +IH
Sbjct: 78 NIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIH 137
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGE 155
+ +VKAG DV V +SL+S+Y +C DD++K F + +VV W+++I Y G
Sbjct: 138 SLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFR 197
Query: 156 EAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV 215
EAI F+++ + + + + V +L AC+ G G E+ D + + T +
Sbjct: 198 EAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSG-EWIDRYISDSGMGRNVFVATSL 256
Query: 216 VDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+D+ +CG L+ A + MP K + + W T++
Sbjct: 257 LDMYVKCGNLERANLIFSAMPEK-DIVSWSTMIQG 290
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 76/167 (45%), Gaps = 4/167 (2%)
Query: 85 LATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSM 144
L Q + IHA +++ D +++ ++ G + S F + + ++ LW++M
Sbjct: 26 LNFFNQLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTM 85
Query: 145 IAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKK-Y 203
I ++AI+L+ M F N+ T +L AC+ G++ L+VK Y
Sbjct: 86 IRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGY 145
Query: 204 RRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
++ T ++ L +C D+A + ++P K N + W +++
Sbjct: 146 DHDVFVK--TSLLSLYVKCDNFDDALKVFDDIPDK-NVVSWTAIITG 189
>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Cucumis sativus]
Length = 720
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 168/451 (37%), Positives = 266/451 (58%), Gaps = 21/451 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGS-LVEGEKVIRLMPIRNVIAWITLIAGKA-QNGLAEDVLD 58
G+ + GS L +Y K G +++ KV + +++ W T+I+G + L+++ L+
Sbjct: 270 GYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEALE 329
Query: 59 QYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAG-ASLDVGVISSLISMY 117
+ +++VG RPD + V VIS+CS +++ QG+Q+H +K S + V ++LI+MY
Sbjct: 330 CFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMY 389
Query: 118 SRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
S+CG L D+ F + V ++SMIA Y HG G ++++LF++M + F ++TF+
Sbjct: 390 SKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMGFTPTNITFI 449
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
S+L AC+H G E G +F++M +K+ +P H++C++DLLGR G L EA LI +P
Sbjct: 450 SVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPF 509
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEF 297
W LL AC+ H + ++A + A +L ++P +AAPYV+L+NI++ R Q +
Sbjct: 510 DPGFFFWSALLGACRIHGNVELAIKAANRLLQLDPLNAAPYVMLANIYSDNGRLQDAASV 569
Query: 298 REAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDT 357
R+ MR+R VKK+PG SW+E+ ++H F D HP +I YLEE+ ++K GY P+
Sbjct: 570 RKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHPMIKKIQEYLEEMMRKIKKVGYTPEV 629
Query: 358 GADMHDMD----SEEKEYNLKHHSEKLAIAFA-EHTRGLIVMLPF-------------KY 399
+ + D E+E L HHSEKLA++F TR +L F KY
Sbjct: 630 RSALVGGDDRVWQREEELRLGHHSEKLAVSFGLMSTREGEPILVFKNLRICVDCHNAIKY 689
Query: 400 ISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
ISE+ REI VRD+ RFH F++G+CSCG YW
Sbjct: 690 ISEVVKREITVRDSHRFHCFKDGQCSCGGYW 720
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 151/318 (47%), Gaps = 10/318 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIR-LMPIRNVIAWITLIAGKAQNGLAEDVLDQ 59
G + + G++L Y K+G L E ++ L R+ ++W +++ Q+ L+
Sbjct: 168 GLDSYVSVGNALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALEL 227
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
Y M + G D T SV+++ + + L G Q HA+++K+G + V S LI +YS+
Sbjct: 228 YLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSK 287
Query: 120 C-GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGK-GEEAINLFEQMEQKEFEANDVTFV 177
C GC+ D K F E D+VLW++MI+ Y + +EA+ F Q++ +D + V
Sbjct: 288 CGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLV 347
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
++ ACS+ +G + L +K R+ ++ + +CG L +A L MP
Sbjct: 348 CVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMP- 406
Query: 238 KANAIIWKTLLSACKTH----KSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQG 293
+ N + + ++++ H +S + R+ E +G P + +L+ + + G
Sbjct: 407 EHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLE--MGFTPTNITFISVLAACAHTGRVEDG 464
Query: 294 VSEFREAMRERNVKKEPG 311
F ++ ++ E G
Sbjct: 465 KIYFNMMKQKFGIEPEAG 482
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 137/298 (45%), Gaps = 13/298 (4%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
+ ++ + ++L Y K + ++ MP + +++ TLIA A+ G + +
Sbjct: 71 DCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLE 130
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
MR D T +I++C +G +Q+HA V G V V ++LI+ YS+ G
Sbjct: 131 MREAFLDMDGFTLSGIITACG--INVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGF 188
Query: 123 LDDSVKTF-LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
L ++ + F E D V W+SM+ AY H +G +A+ L+ +M + + T S+L
Sbjct: 189 LKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLT 248
Query: 182 ACSHCGLKEKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
A ++ G++F ++K Y + + + ++DL +CG + + +
Sbjct: 249 AFTNVQDLLGGLQFHAKLIKSGYHQNSHVG--SGLIDLYSKCGGCMLDCRKVFDEISNPD 306
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAE-----EILGVNPQDAAPYVLLSNIHASAKRWQG 293
++W T++S ++ D++ E +++G P D + ++S + QG
Sbjct: 307 LVLWNTMISGYSLYE--DLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQG 362
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 56/123 (45%), Gaps = 4/123 (3%)
Query: 74 TFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLEC 133
F + +C L G+ +HA +K+ + + + +YS+C L + + F
Sbjct: 10 NFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHT 69
Query: 134 EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGM 193
+V ++++I+AY E A LF++M Q + V++ +L+ A + G +
Sbjct: 70 HDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPD----SVSYNTLIAAYARRGDTQPAF 125
Query: 194 EFF 196
+ F
Sbjct: 126 QLF 128
>gi|449435364|ref|XP_004135465.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Cucumis sativus]
Length = 614
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 161/440 (36%), Positives = 256/440 (58%), Gaps = 14/440 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
DLV +++ K G + + MP R+ ++W +IAG AQ G + + L+ + LM+
Sbjct: 175 DLVCQTTMVSACAKCGDIGFARNLFDSMPQRDFVSWNAMIAGYAQRGQSREALNLFKLMQ 234
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
M G + ++++ +SV+++C+ L L QG+ HA + K + V + ++L+ MY +CG +D
Sbjct: 235 MDGVKVNEVSMISVVTACTHLGALDQGKWAHAYIEKNKIQMTVNLGTALVDMYFKCGNVD 294
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
++K F E +V WS+ I +G G++ + LF M+ + N++TF+S+L CS
Sbjct: 295 RALKVFWEMNEKNVYTWSTAIGGLAMNGYGQKCLELFSFMKHEGIAPNEITFISVLKGCS 354
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
G ++G FD M + + +PRLEHY C+VDL GR G L+EA I MP+K +A W
Sbjct: 355 VVGFVDEGRSHFDSMKRDHGIEPRLEHYGCMVDLYGRAGRLEEALNFINTMPLKPHAGAW 414
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
LL+AC+ +K+ ++ + +++ V ++ YV LSNI+A W VS R++M+
Sbjct: 415 GALLNACRMYKNMELGEFASRKLIEVEGKNHGAYVSLSNIYADTGNWDRVSNVRQSMKAE 474
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
+ K PG S +E+ +VH+F GDKSHP I+ E++ +KL GYV T + + D+
Sbjct: 475 GISKLPGCSVMEVNGEVHEFFSGDKSHPSYDVIETMWGEISKRLKLAGYVASTNSVLFDI 534
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHT--RGLIVML------------PFKYISEIKNREIIV 410
+ EEKE L HSEK+AIAF + GL + + K IS+I REIIV
Sbjct: 535 EEEEKEDALCKHSEKMAIAFGLFSLKEGLPIRIVKNLRICWDCHDVSKMISKIFEREIIV 594
Query: 411 RDASRFHHFRNGKCSCGDYW 430
RD +RFHHF++G+CSC D+W
Sbjct: 595 RDRNRFHHFKDGECSCKDFW 614
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 94/212 (44%), Gaps = 34/212 (16%)
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
PD TF ++ +C++ A G +H ++K G D V S LI MY+ CL +
Sbjct: 109 PDNYTFNFLVRTCAQSACEA-GPAVHGALIKHGFEYDPHVESGLIFMYAEMSCLSSCHRV 167
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEF-------------------- 169
F + D+V ++M++A G A NLF+ M Q++F
Sbjct: 168 FESVQKPDLVCQTTMVSACAKCGDIGFARNLFDSMPQRDFVSWNAMIAGYAQRGQSREAL 227
Query: 170 -----------EANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDL 218
+ N+V+ +S++ AC+H G ++G ++ ++K + + + T +VD+
Sbjct: 228 NLFKLMQMDGVKVNEVSMISVVTACTHLGALDQG-KWAHAYIEKNKIQMTVNLGTALVDM 286
Query: 219 LGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+CG +D A + M K N W T +
Sbjct: 287 YFKCGNVDRALKVFWEMNEK-NVYTWSTAIGG 317
>gi|79329389|ref|NP_001031987.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171830|sp|Q9FND7.1|PP410_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g40405
gi|10178152|dbj|BAB11597.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007161|gb|AED94544.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 159/442 (35%), Positives = 263/442 (59%), Gaps = 18/442 (4%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D V +++ + G +V K+ MP R+ IAW +I+G AQ G + + L+ ++LM+
Sbjct: 173 DFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQ 232
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+ G + + + +SV+S+C++L L QG+ H+ + + + V + ++L+ +Y++CG ++
Sbjct: 233 LEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDME 292
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+++ F E +V WSS + +G GE+ + LF M+Q N VTFVS+L CS
Sbjct: 293 KAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCS 352
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
G ++G FD M ++ +P+LEHY C+VDL R G L++A ++I+ MP+K +A +W
Sbjct: 353 VVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVW 412
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
+LL A + +K+ ++ ++++L + + YVLLSNI+A + W VS R++M+ +
Sbjct: 413 SSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSK 472
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
V+K+PG S +E+ +VH+F +GDKSHP+ +ID ++++ ++L GY DT M D+
Sbjct: 473 GVRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDI 532
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPFK----------------YISEIKNREI 408
D EEKE L HSEK AIAF L +P + IS+I NREI
Sbjct: 533 DEEEKEDALCLHSEKAAIAFG--IMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREI 590
Query: 409 IVRDASRFHHFRNGKCSCGDYW 430
IVRD +RFHHF++G CSC +W
Sbjct: 591 IVRDRNRFHHFKDGHCSCNGFW 612
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 108/248 (43%), Gaps = 35/248 (14%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVG--FRPDKITFVSVISSCSELATLGQGQQ 93
+ A ++I ++ + E D Y + G +PD T ++ +C+ L G Q
Sbjct: 70 TLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQ 129
Query: 94 IHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTF-------LECEYS---------- 136
+H ++ G D V + LIS+Y+ GCLD K F C +
Sbjct: 130 VHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGD 189
Query: 137 --------------DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
D + W++MI+ Y G+ EA+N+F M+ + + N V +S+L A
Sbjct: 190 VVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSA 249
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
C+ G ++G + +++ + K + T +VDL +CG +++A + M K N
Sbjct: 250 CTQLGALDQG-RWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEK-NVY 307
Query: 243 IWKTLLSA 250
W + L+
Sbjct: 308 TWSSALNG 315
>gi|356523117|ref|XP_003530188.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14330-like [Glycine max]
Length = 650
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 162/443 (36%), Positives = 259/443 (58%), Gaps = 15/443 (3%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E D V ++L +Y++ G E KV MP RNV++W TLIAG A G + L + +
Sbjct: 208 EADQVVNNALLGLYVEIGCFDEVLKVFEEMPQRNVVSWNTLIAGFAGQGRVFETLSAFRV 267
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M+ G IT +++ C+++ L G++IH +++K+ + DV +++SL+ MY++CG
Sbjct: 268 MQREGMGFSWITLTTMLPVCAQVTALHSGKEIHGQILKSRKNADVPLLNSLMDMYAKCGE 327
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
+ K F D+ W++M+A + +G+ EA+ LF++M + E N +TFV+LL
Sbjct: 328 IGYCEKVFDRMHSKDLTSWNTMLAGFSINGQIHEALCLFDEMIRYGIEPNGITFVALLSG 387
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
CSH GL +G F +++ + +P LEHY C+VD+LGR G DEA ++ N+P++ +
Sbjct: 388 CSHSGLTSEGKRLFSNVMQDFGVQPSLEHYACLVDILGRSGKFDEALSVAENIPMRPSGS 447
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMR 302
IW +LL++C+ + + +A +AE + + P + YV+LSNI+A+A W+ V RE M
Sbjct: 448 IWGSLLNSCRLYGNVALAEVVAERLFEIEPNNPGNYVMLSNIYANAGMWEDVKRVREMMA 507
Query: 303 ERNVKKEPGVSWLEIKNQVHQFTMGDKSHPR-SMEIDLYLEELTSEMKLRGYVPDTGADM 361
+KK+ G SW++IK+++H F G S R S E EL++ +K GYVP+TG +
Sbjct: 508 LTGMKKDAGCSWIQIKHKIHTFVAGGSSDFRCSAEYKKIWNELSNAVKNLGYVPNTGVVL 567
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFA----------EHTRGLIVMLP----FKYISEIKNRE 407
HD++ E K + HSE+LA FA T+ L V + K +S++ R
Sbjct: 568 HDINEEMKAVWVCEHSERLAAVFALINTGAGMPIRITKNLRVCVDCHSWMKAVSKVTRRL 627
Query: 408 IIVRDASRFHHFRNGKCSCGDYW 430
I++RD +RFHHF NG CSC DYW
Sbjct: 628 IVLRDTNRFHHFENGSCSCKDYW 650
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 137/308 (44%), Gaps = 17/308 (5%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRL---MPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV 66
+ L +Y G + E +V ++ P + W+ + G ++NG + + L Y M
Sbjct: 111 TKLITLYSVCGRVNEARRVFQIDDEKPPEEPV-WVAMAIGYSRNGFSHEALLLYRDMLSC 169
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVG-----VISSLISMYSRCG 121
+P F + +CS+L G+ IHA++VK DVG V ++L+ +Y G
Sbjct: 170 CVKPGNFAFSMALKACSDLDNALVGRAIHAQIVKH----DVGEADQVVNNALLGLYVEIG 225
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
C D+ +K F E +VV W+++IA + G+ E ++ F M+++ + +T ++L
Sbjct: 226 CFDEVLKVFEEMPQRNVVSWNTLIAGFAGQGRVFETLSAFRVMQREGMGFSWITLTTMLP 285
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
C+ G E ++K R+ + ++D+ +CG + + M K +
Sbjct: 286 VCAQVTALHSGKEIHGQILKS-RKNADVPLLNSLMDMYAKCGEIGYCEKVFDRMHSK-DL 343
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
W T+L+ + A + +E++ G+ P LLS S +G F
Sbjct: 344 TSWNTMLAGFSINGQIHEALCLFDEMIRYGIEPNGITFVALLSGCSHSGLTSEGKRLFSN 403
Query: 300 AMRERNVK 307
M++ V+
Sbjct: 404 VMQDFGVQ 411
>gi|357114903|ref|XP_003559233.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 611
Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 164/446 (36%), Positives = 259/446 (58%), Gaps = 16/446 (3%)
Query: 1 GFELDLVAGSSLAHMY--MKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLD 58
GF D ++L HMY +G L + V MP + + W +I G + GL+ D +
Sbjct: 166 GFAADHYVSNTLIHMYSCFGAGFLGDARNVFERMPRESAVTWSAMIGGYVRAGLSSDAVV 225
Query: 59 QYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
+ M++ G RPD++T + V+++ ++L L + + V + G V + ++LI +
Sbjct: 226 LFRGMQVSGVRPDEVTVIGVLAAAADLGALELTRWVGRFVEREGIGKSVTLCNALIDTLA 285
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+CG +D +V F E VV W+S+I A G+G+EA+ +FE+M+ +DV F+
Sbjct: 286 KCGDVDGAVAVFEGMEERTVVSWTSVIDALAMEGRGKEAVGVFEEMKAVGVLPDDVAFIG 345
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+L ACSH G+ ++G +FD M +Y +P++EHY C+VD+ GR G +++ +R MP+K
Sbjct: 346 VLTACSHAGMVDEGRGYFDSMKTEYGIEPKIEHYGCMVDMFGRAGMVEQGLEFVRAMPMK 405
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
N IIW+TL++AC+ H ++ I +L P A YV+LSN++A +RW+ SE R
Sbjct: 406 PNPIIWRTLVAACRAHGRLELGESITRNLLNEFPAHEANYVMLSNVYALTQRWKEKSEIR 465
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
M +R +KK PG S +E+ +VH+F GD+SHP+ EI +EE++ E++ G++ T
Sbjct: 466 REMSKRGIKKVPGCSLVELDGEVHEFIAGDESHPQYKEIYRMVEEMSRELRRIGHIAATS 525
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIK 404
+ D+D E+KE L+ HSEKLAIAF G V + K IS++
Sbjct: 526 EVLLDLDEEDKEGALQWHSEKLAIAFVLLRTPPGTQVRVVKNLRVCSDCHAAIKCISQVY 585
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
NREI+VRD SRFH F++G CSC D+W
Sbjct: 586 NREIVVRDRSRFHRFKDGSCSCKDFW 611
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 98/222 (44%), Gaps = 7/222 (3%)
Query: 60 YNLMRMVGFRPDKITFVSVISSCSEL-ATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
+ LM P+K TF ++ SC+ L + G Q HA +K G + D V ++LI MYS
Sbjct: 123 FPLMLRAAVAPNKFTFPFLLKSCAALPGSPDVGLQAHAAALKFGFAADHYVSNTLIHMYS 182
Query: 119 --RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
G L D+ F V WS+MI Y G +A+ LF M+ ++VT
Sbjct: 183 CFGAGFLGDARNVFERMPRESAVTWSAMIGGYVRAGLSSDAVVLFRGMQVSGVRPDEVTV 242
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
+ +L A + + + V++ + ++D L +CG +D A A+ M
Sbjct: 243 IGVLAA-AADLGALELTRWVGRFVEREGIGKSVTLCNALIDTLAKCGDVDGAVAVFEGME 301
Query: 237 VKANAIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAA 276
+ + W +++ A A + EE+ +GV P D A
Sbjct: 302 ER-TVVSWTSVIDALAMEGRGKEAVGVFEEMKAVGVLPDDVA 342
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 160/431 (37%), Positives = 242/431 (56%), Gaps = 14/431 (3%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L MY K L + + + +R++ W +I AQ E L+ + M+ G +
Sbjct: 555 TALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVK 614
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P++ T +S CS LA+L GQQ+H+ V K+G D+ V S+L+ MY++CGC++++
Sbjct: 615 PNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEAL 674
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F D + W+++I Y +G+G +A+ F M + + VTF +L ACSH GL
Sbjct: 675 FEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLV 734
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
E+G E F+ M + + P ++H C+VD+LGR G DE I+ M + NA+IW+T+L
Sbjct: 735 EEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLG 794
Query: 250 ACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKE 309
A K H + + + A ++ + P++ + Y+LLSNI A+ RW V R M + VKKE
Sbjct: 795 ASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKE 854
Query: 310 PGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEK 369
PG SW+E QVH F D SHP+ EI L L+EL E+ YVP T +H++ EK
Sbjct: 855 PGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLDELDRELASIQYVPKTEYVLHNVGETEK 914
Query: 370 EYNLKHHSEKLAIAFA---EHTRGLIVMLP-----------FKYISEIKNREIIVRDASR 415
+ NL+ HSE+LA+ FA + I + K+IS I N+EI+VRD R
Sbjct: 915 KENLRFHSERLALGFALISTSSEKKIRIFKNLRICRDCHDVMKHISSITNQEIVVRDVRR 974
Query: 416 FHHFRNGKCSC 426
FHHF+NG CSC
Sbjct: 975 FHHFKNGACSC 985
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 132/248 (53%), Gaps = 2/248 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE D+ ++L MYMK+G + +G K+ M R++I+W ++G G+ + L +
Sbjct: 445 GFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIF 504
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M GF P+ TF+S++ SCS L + G+Q+HA ++K + V ++LI MY++C
Sbjct: 505 YHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKC 564
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
L+D+ F D+ W+ +I Y +GE+A+N F QM+Q+ + N+ T L
Sbjct: 565 MYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCL 624
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
CS E G + MV K + + +VD+ +CG ++EA AL + ++ +
Sbjct: 625 SGCSSLASLEGGQQLHS-MVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEAL-IRRD 682
Query: 241 AIIWKTLL 248
I W T++
Sbjct: 683 TIAWNTII 690
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 118/250 (47%), Gaps = 2/250 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G LDL GS+L +Y K G + K+ MP +N + W L+ G AQ G VL +
Sbjct: 243 GLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLF 302
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M + + ++ T +V+ C+ L QGQ IH+ ++K G + + L+ MYS+C
Sbjct: 303 CSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKC 362
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G D++ F + D+V+WS++I G+ EE+I LF M + N T SLL
Sbjct: 363 GLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLL 422
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
A ++ G + G V KY + + +V + + G + + L +M V +
Sbjct: 423 SAATNTGNLQYGQS-IHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESM-VDRD 480
Query: 241 AIIWKTLLSA 250
I W LS
Sbjct: 481 LISWNAYLSG 490
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 121/249 (48%), Gaps = 2/249 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+E + G L MY K G ++ V + + +++ W LI Q G +E+ + +
Sbjct: 344 GYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLF 403
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+LMR+ P++ T S++S+ + L GQ IHA V K G DV V ++L++MY +
Sbjct: 404 HLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKN 463
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
GC+ D K + D++ W++ ++ G + + +F M ++ F N TF+S+L
Sbjct: 464 GCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISIL 523
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
+CS G + ++K T ++D+ +C YL++A + V+ +
Sbjct: 524 GSCSCLFDVHYGRQVHAHIIKNQLDDNNFV-CTALIDMYAKCMYLEDADVAFNRLSVR-D 581
Query: 241 AIIWKTLLS 249
W +++
Sbjct: 582 LFTWTVIIT 590
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 120/241 (49%), Gaps = 6/241 (2%)
Query: 11 SLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRP 70
SL ++Y K V+ MP R+V++W LI G G A D + + M+ G P
Sbjct: 152 SLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMP 211
Query: 71 DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTF 130
++ T + + +CS L G+Q+HA+ K G LD+ V S+L+ +Y++CG ++ + K F
Sbjct: 212 NEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMF 271
Query: 131 LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKE 190
+ + V W+ ++ Y G + LF M + + + N+ T ++L C++ +
Sbjct: 272 IGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLK 331
Query: 191 KGMEFFDLMVK-KYRRKPRLEHYTC-VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
+G L++K Y E C +VD+ +CG +A + + + K + ++W L+
Sbjct: 332 QGQVIHSLIIKCGYEGN---EFIGCGLVDMYSKCGLAIDAIGVFKTIK-KPDIVVWSALI 387
Query: 249 S 249
+
Sbjct: 388 T 388
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 85/170 (50%), Gaps = 6/170 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ GS+L MY K G + E E + + R+ IAW T+I G AQNG L + +M
Sbjct: 651 DMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMML 710
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSRCGCL 123
G PD +TF ++S+CS + +G++ + + G S V + ++ + R G
Sbjct: 711 DEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKF 770
Query: 124 DDSVKTFLECEYS-DVVLWSSMIAAYGFHGK---GEEAIN-LFEQMEQKE 168
D+ + + S + ++W +++ A H GE+A N LFE ++E
Sbjct: 771 DELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEE 820
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 89/178 (50%), Gaps = 6/178 (3%)
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
+ S++ C+ +LG + IH +VK + D + SL+++Y++C + +
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGME 194
DVV W+++I G ++I LF++M+ + N+ T + L ACS C + G +
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ 234
Query: 195 FFDLMVKKYRRKPRLEHY--TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+ + ++ L+ + + +VDL +CG ++ A+ + MP + N + W LL+
Sbjct: 235 ---MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMP-EQNDVTWNVLLNG 288
>gi|212274581|ref|NP_001130403.1| uncharacterized protein LOC100191499 [Zea mays]
gi|194689034|gb|ACF78601.1| unknown [Zea mays]
gi|413932819|gb|AFW67370.1| hypothetical protein ZEAMMB73_996266 [Zea mays]
Length = 606
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 164/414 (39%), Positives = 240/414 (57%), Gaps = 26/414 (6%)
Query: 37 VIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHA 96
V+++ +IA ++ + L + M+ G P +T +SV+S+C+ L L G+ +H
Sbjct: 199 VVSYNAMIAAAVRSSRPGEALVLFREMQAKGLNPTPVTVISVLSACALLGALQLGRWLHD 258
Query: 97 EVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEE 156
V K G V V ++L+ MY++CG L+D++ F E D WS MI AY HG G E
Sbjct: 259 YVRKLGLGSLVKVSTALVDMYAKCGSLEDAIAVFQGMESRDRQAWSVMIVAYANHGYGRE 318
Query: 157 AINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVV 216
AI+LFE+M+++ + +D+TF+ LLYACSH GL +G+ +FD M K + P ++HY CV
Sbjct: 319 AISLFEEMKKQGMKPDDITFLGLLYACSHSGLVSEGLRYFDDM-KDHGIVPGIKHYGCVT 377
Query: 217 DLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAA 276
DLL R G L+ A I +P+ I+W+TLLSAC H ++ R+ E IL ++
Sbjct: 378 DLLARSGQLERAYKFIDELPINPTPILWRTLLSACGGHGDVELGKRVFERILELDDSHGG 437
Query: 277 PYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSME 336
YV+ SN+ A+ W+ ++ R+ M ++ V K PG S +EI N VH+F GD HP+S E
Sbjct: 438 DYVIFSNLCANTGYWEEMNRVRKLMSDKGVVKVPGCSSIEIDNTVHEFFAGDGRHPKSQE 497
Query: 337 IDLYLEELTSEMKLRGYVPDTGADMH-DMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVML 395
++E+ ++KL GY+PDT H +M EEK +LK+HSEKLAIAF GL+
Sbjct: 498 ARKMVDEVIDQLKLVGYIPDTSHVFHVEMGEEEKAISLKYHSEKLAIAF-----GLLNTA 552
Query: 396 P-------------------FKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
P K++S + NR II+RD +RFHHF G CSCGDYW
Sbjct: 553 PGATLRVVKNLRVCPDCHSMAKFVSMVFNRRIILRDLNRFHHFERGICSCGDYW 606
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 124/255 (48%), Gaps = 9/255 (3%)
Query: 62 LMRMV--GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+RM+ G PD TFVS++ +C+ G+Q HA VK GA+ V +LI+MY+
Sbjct: 121 FVRMLEEGVAPDTYTFVSLLKACAAARAGEHGRQAHAVAVKLGAAGHDYVRPTLINMYAE 180
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG + TF + VV +++MIAA + EA+ LF +M+ K VT +S+
Sbjct: 181 CGDARAARVTFGRADGDCVVSYNAMIAAAVRSSRPGEALVLFREMQAKGLNPTPVTVISV 240
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L AC+ G + G D V+K ++ T +VD+ +CG L++A A+ + M +
Sbjct: 241 LSACALLGALQLGRWLHD-YVRKLGLGSLVKVSTALVDMYAKCGSLEDAIAVFQGMESR- 298
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLSNIHASAKRWQGVSEF 297
+ W ++ A H A + EE+ G+ P D LL S +G+ F
Sbjct: 299 DRQAWSVMIVAYANHGYGREAISLFEEMKKQGMKPDDITFLGLLYACSHSGLVSEGLRYF 358
Query: 298 REAMRERNVKKEPGV 312
+ M++ + PG+
Sbjct: 359 DD-MKDHGIV--PGI 370
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 90/195 (46%), Gaps = 4/195 (2%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L MY K GSL + V + M R+ AW +I A +G + + + M+ G +
Sbjct: 273 TALVDMYAKCGSLEDAIAVFQGMESRDRQAWSVMIVAYANHGYGREAISLFEEMKKQGMK 332
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
PD ITF+ ++ +CS + +G + ++ G + + + +R G L+ + K
Sbjct: 333 PDDITFLGLLYACSHSGLVSEGLRYFDDMKDHGIVPGIKHYGCVTDLLARSGQLERAYKF 392
Query: 130 FLECEYSDV-VLWSSMIAAYGFHGKGEEAINLFEQ-MEQKEFEANDVTFVSLLYACSHCG 187
E + +LW ++++A G HG E +FE+ +E + D S L C++ G
Sbjct: 393 IDELPINPTPILWRTLLSACGGHGDVELGKRVFERILELDDSHGGDYVIFSNL--CANTG 450
Query: 188 LKEKGMEFFDLMVKK 202
E+ LM K
Sbjct: 451 YWEEMNRVRKLMSDK 465
>gi|297737119|emb|CBI26320.3| unnamed protein product [Vitis vinifera]
Length = 522
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 159/393 (40%), Positives = 242/393 (61%), Gaps = 14/393 (3%)
Query: 52 LAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVIS 111
L + VL + M+ + +++T V++IS+C+EL L QG H V+K L+ V +
Sbjct: 130 LIKSVLTLFIEMQKSLIKANEVTLVALISACAELGALSQGAWAHVYVLKHNLKLNHFVGT 189
Query: 112 SLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEA 171
+LI MYS+CGCLD + + F + + D + +++MI + HG G +A++LF++M +
Sbjct: 190 ALIDMYSKCGCLDLACQLFDQLPHRDTLCYNAMIGGFAIHGYGHQALDLFKKMTLEGLAP 249
Query: 172 NDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAAL 231
+DVT V + +CSH GL E+G + F+ M + Y +P+LEHY C+VDLLGR G L EA
Sbjct: 250 DDVTLVVTMCSCSHVGLVEEGCDVFESMKEVYGVEPKLEHYGCLVDLLGRAGRLREAEER 309
Query: 232 IRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRW 291
+ NMP+K NA+IW++LL A + H + ++ + + ++ + P+ + YVLLSN++AS RW
Sbjct: 310 VLNMPMKPNAVIWRSLLGAARVHGNLEIGEVVLKHLIQLEPETSGNYVLLSNMYASINRW 369
Query: 292 QGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLR 351
V R+ M++ + K PG S +E+ +H+F MGDK+HPRS EI L LEE++ +
Sbjct: 370 DDVKRVRKLMKDHGINKVPGSSLVEVGGAMHEFLMGDKTHPRSKEIYLKLEEMSRRLHEY 429
Query: 352 GYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFA----EHTRGLIVMLPF---------- 397
G+ P T + D++ EEKE L +HSE+LAIAFA H + ++
Sbjct: 430 GHKPRTLEVLFDIEEEEKEDALSYHSERLAIAFALIASHHCAPIRIIKNLRVCGDCHTSS 489
Query: 398 KYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
K IS+I REIIVRD +RFHHF+ G CSC DYW
Sbjct: 490 KLISKIYEREIIVRDRNRFHHFKEGACSCSDYW 522
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 84/185 (45%), Gaps = 3/185 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
+L+ G++L MY K G L ++ +P R+ + + +I G A +G LD +
Sbjct: 180 NLKLNHFVGTALIDMYSKCGCLDLACQLFDQLPHRDTLCYNAMIGGFAIHGYGHQALDLF 239
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSR 119
M + G PD +T V + SCS + + +G + + + G + L+ + R
Sbjct: 240 KKMTLEGLAPDDVTLVVTMCSCSHVGLVEEGCDVFESMKEVYGVEPKLEHYGCLVDLLGR 299
Query: 120 CGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEAN-DVTFV 177
G L ++ + L + V+W S++ A HG E + + + Q E E + + +
Sbjct: 300 AGRLREAEERVLNMPMKPNAVIWRSLLGAARVHGNLEIGEVVLKHLIQLEPETSGNYVLL 359
Query: 178 SLLYA 182
S +YA
Sbjct: 360 SNMYA 364
>gi|125546238|gb|EAY92377.1| hypothetical protein OsI_14107 [Oryza sativa Indica Group]
Length = 602
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 158/446 (35%), Positives = 255/446 (57%), Gaps = 16/446 (3%)
Query: 1 GFELDLVAGSSLAHMY--MKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLD 58
GF D ++L HMY G L + V MP + + W +I G + GL+ D ++
Sbjct: 157 GFATDQYVSNTLIHMYSCFGGGFLGDARNVFDRMPKESAVTWSAMIGGYVRGGLSSDAVE 216
Query: 59 QYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
+ M+ G + D++T + V+++ ++L L + + V + G V + ++LI +
Sbjct: 217 LFREMQANGVQADEVTVIGVLAAATDLGALELARWVRRFVEREGIGKSVTLCNALIDTLA 276
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+CG +D +V F + VV W+S+I A G+G+EA+ +FE+M+ +DV F+
Sbjct: 277 KCGDVDGAVAVFEGMQQRSVVSWTSVIDALAMEGRGKEAVRVFEEMKVAGVPPDDVAFIG 336
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+L ACSH G+ ++G +FD M +Y +P++EHY C+VD+ GR G ++ A +R MP++
Sbjct: 337 VLTACSHAGMVDEGCGYFDAMKVEYGIEPKIEHYGCMVDMFGRAGMVERAMEFVRTMPIQ 396
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
N +IW++L+SAC+ H ++ I +L P A Y++LSN+ A +RW+ SE R
Sbjct: 397 PNPVIWRSLVSACRAHGRLELGESITRSLLHEYPAHEANYIMLSNVFALTQRWKEKSEIR 456
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
M +R +KK PG S +E+ +VH+F GD+SHP+ +I +EE+ E++ G++ T
Sbjct: 457 REMSKRGIKKVPGCSIVELDGEVHEFIAGDESHPQYKDIYRMVEEMARELRRVGHIAATS 516
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIK 404
+ D+D E+KE L+ HSEKLAIAFA G V + K IS++
Sbjct: 517 EVLLDLDEEDKEGALQWHSEKLAIAFALLRTPPGTQVRVVKNLRVCSDCHAAIKCISQVY 576
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
REI+VRD SRFH F++G CSC D+W
Sbjct: 577 RREIVVRDRSRFHRFKDGSCSCKDFW 602
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 104/223 (46%), Gaps = 9/223 (4%)
Query: 60 YNLMRMVGFRPDKITFVSVISSCSEL-ATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
+ LM P+K TF ++ +C+ L + G Q HA +K G + D V ++LI MYS
Sbjct: 114 FPLMLRGAVVPNKFTFPFLLKACAALPGSPDVGLQAHAAALKFGFATDQYVSNTLIHMYS 173
Query: 119 RC---GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVT 175
C G L D+ F V WS+MI Y G +A+ LF +M+ +A++VT
Sbjct: 174 -CFGGGFLGDARNVFDRMPKESAVTWSAMIGGYVRGGLSSDAVELFREMQANGVQADEVT 232
Query: 176 FVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM 235
+ +L A + G E + V++ + ++D L +CG +D A A+ M
Sbjct: 233 VIGVLAAATDLGALELA-RWVRRFVEREGIGKSVTLCNALIDTLAKCGDVDGAVAVFEGM 291
Query: 236 PVKANAIIWKTLLSACKTHKSTDMAGRIAEE--ILGVNPQDAA 276
+ + + W +++ A A R+ EE + GV P D A
Sbjct: 292 QQR-SVVSWTSVIDALAMEGRGKEAVRVFEEMKVAGVPPDDVA 333
>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
Length = 697
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 160/445 (35%), Positives = 262/445 (58%), Gaps = 15/445 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+E D ++L +Y+ + + +V M +++V AW ++ G + + + +
Sbjct: 253 GYENDKHIKTALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHF 312
Query: 61 NLMRMV-GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
N M + + D I + ++SSCS L QG+++HA +K + ++ V S++I MY+
Sbjct: 313 NKMLGIQNLKLDSIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYAN 372
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG L+D+ + F DVV W++MIA G +G G +AI+LF QM+ + ++ TFVS+
Sbjct: 373 CGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSV 432
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
LYACSH G+ +G++ F MVK P L+HY CV+D+LGR G LD A + I NMP +
Sbjct: 433 LYACSHAGMVYEGLQIFYHMVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQP 492
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
+ ++ TLL AC+ H + + I+++I + P DA YVLLSN++A A W+GV R
Sbjct: 493 DFDVYSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRA 552
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
++R + +KK+PG S +EI +++ F G+K HP+ +I+ L+ L ++K GYVP+T
Sbjct: 553 SLRSKRLKKDPGFSSIEINQEIYTFMAGEKDHPQYFKIEGILKGLILKIKKAGYVPNTNV 612
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKN 405
+ D+ + K+ L HHSEK+AIAF G I+ + K++S++
Sbjct: 613 LLQDVSDDMKKDILYHHSEKMAIAFGLMRTKPGTIIRITKNLRTCNDCHSASKFVSKVFG 672
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
R ++++DA+RFH F++G CSC DYW
Sbjct: 673 RVLVIKDANRFHVFQDGVCSCRDYW 697
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 139/282 (49%), Gaps = 4/282 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + +SL + Y+ G L + +++ P +NV++W LI+G A+N + +D +
Sbjct: 51 GLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTILISGLAKNDCFVEAIDVF 110
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M M F+P+ +T SV+ + + L + + +H V+ G +V V ++L+ MYS+
Sbjct: 111 REMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKF 170
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
GC+ + + F +VV W+++++ Y HG EEAI+LF M +K + T +SL+
Sbjct: 171 GCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLI 230
Query: 181 YACSHCGLKEKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
A G + G +++ Y ++ T ++D+ +D+A + M VK
Sbjct: 231 PASLSVGCLQVGTGIHGFIIRTGYENDKHIK--TALMDIYVSHNCVDDAHRVFSEMFVK- 287
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLL 281
+ W +L+ + + D A + ++LG+ VL+
Sbjct: 288 DVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLM 329
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 123/251 (49%), Gaps = 3/251 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE ++ ++L MY K G + ++ M RNV++W +++G + +G +E+ +D +
Sbjct: 152 GFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLF 211
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
NLMR G D T +S+I + + L G IH +++ G D + ++L+ +Y
Sbjct: 212 NLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSH 271
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQ-KEFEANDVTFVSL 179
C+DD+ + F E DV W+ M+ + + AI F +M + + + + + +
Sbjct: 272 NCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGI 331
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L +CSH G ++G L +K + + V+D+ CG L++A M K
Sbjct: 332 LSSCSHSGALQQGRRVHALAIKTCFAN-NIFVGSAVIDMYANCGNLEDAKRFFYGMGEK- 389
Query: 240 NAIIWKTLLSA 250
+ + W +++
Sbjct: 390 DVVCWNAMIAG 400
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 87/178 (48%), Gaps = 4/178 (2%)
Query: 84 ELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSS 143
+L L QQIHA+++ +G + + + +SL++ Y CG L D+ + F +VV W+
Sbjct: 33 KLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTI 92
Query: 144 MIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVK-K 202
+I+ + EAI++F +M F+ N VT S+L A ++ GL V+
Sbjct: 93 LISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGG 152
Query: 203 YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMA 260
+ +E T +VD+ + G + A L +M + N + W ++S H ++ A
Sbjct: 153 FEGNVFVE--TALVDMYSKFGCMGVARQLFESMSER-NVVSWNAIVSGYSDHGFSEEA 207
>gi|357151953|ref|XP_003575959.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Brachypodium distachyon]
Length = 689
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 171/451 (37%), Positives = 259/451 (57%), Gaps = 27/451 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF++D+ +++ Y K + V M +RN ++W ++I AQ+G ED L Y
Sbjct: 245 GFDMDVSVSNAMVDFYGKCRCAGKARAVFDGMRVRNSVSWCSMIVAYAQHGAEEDALAVY 304
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
R G P SV+++C+ L L G+ +HA V++ ++ V S+L+ MY +C
Sbjct: 305 MGARNTGEEPTDFMVSSVLTTCAGLLGLNFGRALHAVAVRSCIDANIFVASALVDMYGKC 364
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM-EQKEFEANDVTFVSL 179
G ++D+ + FL+ ++V W++MI Y G + A+ +F+ M N +T V++
Sbjct: 365 GGVEDAEQVFLDMPERNLVTWNAMIGGYAHIGDAQNALAVFDAMIRSGGTSPNHITLVNV 424
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
+ ACS GL + G E FD M +++ +PR EHY CVVDLLGR G + A +I+ MP++
Sbjct: 425 ITACSRGGLTKDGYELFDTMRERFGVEPRTEHYACVVDLLGRAGMEERAYEIIQRMPMRP 484
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIA-EEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
+ +W LL ACK H T++ GRIA E++ ++PQD+ +VLLSN+ ASA RW ++ R
Sbjct: 485 SISVWGALLGACKMHGKTEL-GRIASEKLFELDPQDSGNHVLLSNMLASAGRWAEATDVR 543
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
+ M+ +KKEPG SW+ KN VH F D H R+ EI L +L +M+ GY+PDT
Sbjct: 544 KEMKNVGIKKEPGCSWITWKNVVHVFYAKDTKHDRNSEIQALLAKLKKQMQASGYMPDTQ 603
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKY 399
++D++ EEKE + HSEKLA+AF GLI + P FK+
Sbjct: 604 YSLYDVEEEEKETEVFQHSEKLALAF-----GLIHIPPSVPIRITKNLRICVDCHRAFKF 658
Query: 400 ISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+S I REIIVRD +RFH+F+ +CSC DYW
Sbjct: 659 VSGIVGREIIVRDNNRFHYFKQFECSCKDYW 689
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 134/300 (44%), Gaps = 20/300 (6%)
Query: 15 MYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKIT 74
MY K+G L ++ MP RNVIAW ++ +G + Y +R G P+ ++
Sbjct: 158 MYFKTGCLGLARRLFEEMPNRNVIAWNAVMTNAVIDGRPLETFKAYFGLREAGGMPNVVS 217
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
+ ++C+ L G+Q H VV G +DV V ++++ Y +C C + F
Sbjct: 218 VCAFFNACAGAMFLSLGEQFHGFVVTCGFDMDVSVSNAMVDFYGKCRCAGKARAVFDGMR 277
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGME 194
+ V W SMI AY HG E+A+ ++ E D S+L C+ GL G+
Sbjct: 278 VRNSVSWCSMIVAYAQHGAEEDALAVYMGARNTGEEPTDFMVSSVLTTCA--GL--LGLN 333
Query: 195 FFDLMVKKYRRK---PRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSAC 251
F + R + + +VD+ G+CG +++A + +MP + N + W ++
Sbjct: 334 FGRALHAVAVRSCIDANIFVASALVDMYGKCGGVEDAEQVFLDMPER-NLVTWNAMIGGY 392
Query: 252 KTHKSTDMAGRIAEEIL---GVNPQDAAPYVLLSNIHASAKRWQGVS----EFREAMRER 304
A + + ++ G +P ++ L N+ + R G++ E + MRER
Sbjct: 393 AHIGDAQNALAVFDAMIRSGGTSPN----HITLVNVITACSR-GGLTKDGYELFDTMRER 447
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 104/244 (42%), Gaps = 7/244 (2%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVI--SSCSELATLGQGQQ 93
V+++ I+G AQ+ L + M VG RP+ TF S ++C+ G Q
Sbjct: 75 TVVSFTAFISGAAQHARPLAALSAFAAMLRVGLRPNDFTFPSAFKAAACAPPRCSTVGPQ 134
Query: 94 IHAEVVKAG-ASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHG 152
IHA ++ G D V + + MY + GCL + + F E +V+ W++++ G
Sbjct: 135 IHALALRFGYLPGDPFVSCAAMDMYFKTGCLGLARRLFEEMPNRNVIAWNAVMTNAVIDG 194
Query: 153 KGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY 212
+ E + + + N V+ + AC+ G +F +V +
Sbjct: 195 RPLETFKAYFGLREAGGMPNVVSVCAFFNACAGAMFLSLGEQFHGFVV-TCGFDMDVSVS 253
Query: 213 TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTD--MAGRIAEEILGV 270
+VD G+C +A A+ M V+ N++ W +++ A H + + +A + G
Sbjct: 254 NAMVDFYGKCRCAGKARAVFDGMRVR-NSVSWCSMIVAYAQHGAEEDALAVYMGARNTGE 312
Query: 271 NPQD 274
P D
Sbjct: 313 EPTD 316
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 159/440 (36%), Positives = 262/440 (59%), Gaps = 14/440 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
+LVA +++ Y K G + V M ++++ W +I+G A++ ++ L+ +N M+
Sbjct: 288 NLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQ 347
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+G +PD++T +SVI++C+ L L Q + IH V K G + + ++LI MY++CG L+
Sbjct: 348 SLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLE 407
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ + F + +V+ W+ MI+A+ HG A+ F QME + E N +TFV +LYACS
Sbjct: 408 RARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACS 467
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL E+G + F M+ ++ P+ HY C+VDL GR L EA L+ MP+ N IIW
Sbjct: 468 HAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREALELVEAMPLAPNVIIW 527
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
+L++AC+ H ++ A+ +L ++P +V LSNI+A A+RW+ V + R+ M+ +
Sbjct: 528 GSLMAACRVHGEIELGEFAAKRLLELDPDHDGAHVFLSNIYAKARRWEDVGQVRKLMKHK 587
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
+ KE G S E+ N++H+F + D+SH + EI L E+ S++KL GY P+T + + D+
Sbjct: 588 GISKERGCSRFELNNEIHEFLVADRSHKHADEIYEKLYEVVSKLKLVGYSPNTCSILVDL 647
Query: 365 DSEEKEYNLKHHSEKLAIAFA---EHTRGLIVMLP-----------FKYISEIKNREIIV 410
+ EEK+ + HSEKLA+ + + T I ++ K S++ REI+V
Sbjct: 648 EEEEKKEVVLWHSEKLALCYGLMRDGTGSCIRIIKNLRVCEDCHTFIKLASKVYEREIVV 707
Query: 411 RDASRFHHFRNGKCSCGDYW 430
RD +RFHH+++G CSC DYW
Sbjct: 708 RDRTRFHHYKDGVCSCKDYW 727
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 136/298 (45%), Gaps = 33/298 (11%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ D + L MY G + E + M R+V+ W +I G Q+GL D L +
Sbjct: 152 GFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLF 211
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ PD++ +V+S+C L G+ IH +++ +D + S+L++MY+ C
Sbjct: 212 EEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASC 271
Query: 121 GCLDDSVKTF-------------LECEYS------------------DVVLWSSMIAAYG 149
G +D ++ F + YS D+V WS+MI+ Y
Sbjct: 272 GSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYA 331
Query: 150 FHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRL 209
+EA+NLF +M+ + + VT +S++ AC+H G ++ ++ L V K L
Sbjct: 332 ESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQA-KWIHLFVDKNGFGGAL 390
Query: 210 EHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEI 267
++++ +CG L+ A + MP K N I W ++SA H A R ++
Sbjct: 391 PINNALIEMYAKCGSLERARRIFDKMPRK-NVISWTCMISAFAMHGDAGSALRFFHQM 447
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 87/186 (46%), Gaps = 3/186 (1%)
Query: 54 EDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSL 113
E L Y MR G D+ +F ++ + S + +L +G +IH K G D V + L
Sbjct: 104 EKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGL 163
Query: 114 ISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEAND 173
+ MY+ CG + ++ F + + DVV WS MI Y G +A+ LFE+M+ E ++
Sbjct: 164 VRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDE 223
Query: 174 VTFVSLLYACSHCGLKEKGMEFFD-LMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALI 232
+ ++L AC G G D +M P L+ + +V + CG +D A L
Sbjct: 224 MMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQ--SALVTMYASCGSMDLALNLF 281
Query: 233 RNMPVK 238
M K
Sbjct: 282 EKMTPK 287
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 91/187 (48%), Gaps = 7/187 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF L ++L MY K GSL ++ MP +NVI+W +I+ A +G A L +
Sbjct: 385 GFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFF 444
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV-ISSLISMYSR 119
+ M P+ ITFV V+ +CS + +G++I ++ V ++ ++ R
Sbjct: 445 HQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGR 504
Query: 120 CGCLDDSVKTFLECEYS-DVVLWSSMIAAYGFHGK---GEEAINLFEQMEQKEFEANDVT 175
L ++++ + +V++W S++AA HG+ GE A +++ A+
Sbjct: 505 ANLLREALELVEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLELDPDHDGAH--V 562
Query: 176 FVSLLYA 182
F+S +YA
Sbjct: 563 FLSNIYA 569
>gi|224129622|ref|XP_002328762.1| predicted protein [Populus trichocarpa]
gi|222839060|gb|EEE77411.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 166/448 (37%), Positives = 260/448 (58%), Gaps = 24/448 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D V+ +SL Y K G + E + +LMP +N +W ++A Q + ++ M+
Sbjct: 187 DSVSWTSLISGYSKWGLIDEAFTIFQLMPQKNSASWNAMMAAYVQTNRFHEAFALFDRMK 246
Query: 65 MVGFRP-DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
DK +++S+C+ L L QG+ IH + + G LD + ++++ MY +CGCL
Sbjct: 247 AENNNVLDKFVATTMLSACTGLGALDQGKWIHEYIKRNGIELDSKLTTAIVDMYCKCGCL 306
Query: 124 DDSVKTF----LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
+ +++ F L C + + W+ MI HG GE AI LF++ME++ +D+TF++L
Sbjct: 307 EKALQVFHSLPLPCRW--ISSWNCMIGGLAMHGNGEAAIQLFKEMERQRVAPDDITFLNL 364
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L AC+H GL E+G +F M++ Y +PR+EH+ C+VDLLGR G + EA LI MPV
Sbjct: 365 LTACAHSGLVEEGRNYFSYMIRVYGIEPRMEHFGCMVDLLGRAGMVPEARKLIDEMPVSP 424
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
+ + TLL ACK H++ ++ I ++ + P ++ YVLL+N++A+A +W+ ++ R+
Sbjct: 425 DVTVLGTLLGACKKHRNIELGEEIGRRVIELEPNNSGRYVLLANLYANAGKWEDAAKVRK 484
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M +R VKK PG S +E++ VH+F G+++HP++ E+ + E+ +K GYV DT
Sbjct: 485 LMDDRGVKKAPGFSMIELQGTVHEFIAGERNHPQAKELHAKVYEMLEHLKSVGYVADTNG 544
Query: 360 DM--HDMDSEEKEYN-LKHHSEKLAIAF-------AEHTRGLIVML-------PFKYISE 402
+ HD D EE N L +HSEKLAIAF E R L + K IS
Sbjct: 545 VLHGHDFDEEEDGENPLYYHSEKLAIAFGLSRTKPGETLRILKNLRICEDCHHACKLIST 604
Query: 403 IKNREIIVRDASRFHHFRNGKCSCGDYW 430
+ +REIIVRD +RFH F+ G+CSC DYW
Sbjct: 605 VFDREIIVRDRTRFHRFKMGQCSCQDYW 632
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 139/321 (43%), Gaps = 41/321 (12%)
Query: 19 SGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGL--AEDVLDQYNLMRMVGFRPDKITFV 76
S +L K+ +P + + T+I G + L +L Y+ M P+ TF
Sbjct: 70 SDALTYALKLFDSIPQPDAFLYNTIIKGFLHSQLLPTNSILLLYSHMLQNSVLPNNFTFP 129
Query: 77 SVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYS 136
S++ +C ++ G QIHA + K G ++SLI MY L+++ + F +
Sbjct: 130 SLLIACRKIQ---HGMQIHAHLFKFGFGAHSVCLNSLIHMYVTFQALEEARRVFHTIPHP 186
Query: 137 DVVLWSSMIAAYGFHGKGEEAINLFEQMEQK----------------------------E 168
D V W+S+I+ Y G +EA +F+ M QK +
Sbjct: 187 DSVSWTSLISGYSKWGLIDEAFTIFQLMPQKNSASWNAMMAAYVQTNRFHEAFALFDRMK 246
Query: 169 FEANDV--TFV--SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGY 224
E N+V FV ++L AC+ G ++G ++ +K+ + + T +VD+ +CG
Sbjct: 247 AENNNVLDKFVATTMLSACTGLGALDQG-KWIHEYIKRNGIELDSKLTTAIVDMYCKCGC 305
Query: 225 LDEAAALIRNMPVKANAI-IWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLL 281
L++A + ++P+ I W ++ H + + A ++ +E+ V P D LL
Sbjct: 306 LEKALQVFHSLPLPCRWISSWNCMIGGLAMHGNGEAAIQLFKEMERQRVAPDDITFLNLL 365
Query: 282 SNIHASAKRWQGVSEFREAMR 302
+ S +G + F +R
Sbjct: 366 TACAHSGLVEEGRNYFSYMIR 386
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 85/179 (47%), Gaps = 10/179 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPI--RNVIAWITLIAGKAQNGLAEDVLD 58
G ELD +++ MY K G L + +V +P+ R + +W +I G A +G E +
Sbjct: 285 GIELDSKLTTAIVDMYCKCGCLEKALQVFHSLPLPCRWISSWNCMIGGLAMHGNGEAAIQ 344
Query: 59 QYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMY 117
+ M PD ITF++++++C+ + +G+ + +++ G + ++ +
Sbjct: 345 LFKEMERQRVAPDDITFLNLLTACAHSGLVEEGRNYFSYMIRVYGIEPRMEHFGCMVDLL 404
Query: 118 SRCGCLDDSVKTFLECEYS-DVVLWSSMIAAYGFHGKGEEAINLFEQMEQK--EFEAND 173
R G + ++ K E S DV + +++ A K I L E++ ++ E E N+
Sbjct: 405 GRAGMVPEARKLIDEMPVSPDVTVLGTLLGA----CKKHRNIELGEEIGRRVIELEPNN 459
>gi|297794613|ref|XP_002865191.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311026|gb|EFH41450.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 174/445 (39%), Positives = 251/445 (56%), Gaps = 17/445 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF + +SL +Y + KV M V W L++G + N ED L+ +
Sbjct: 255 GFLYEEYVTASLITLYANCKRTEDSRKVFGEMVHEKVAVWTALLSGYSLNRKHEDALNVF 314
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M P++ TF S ++SCS L TL G++IH VK G V +SL+ MYS
Sbjct: 315 SEMIRNSILPNQSTFASGLNSCSALGTLDWGKEIHGVAVKLGLGTVAFVGNSLVVMYSDS 374
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++D+V F+E +V W+S+I HG+G+ A +F QM + E +++TF LL
Sbjct: 375 GNVNDAVSVFIEIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLL 434
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPR-LEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
ACSHCG +KG + F + R ++HYTC+VD+LGRCG L EA LI +M VK
Sbjct: 435 SACSHCGFLQKGRKLFYYISSGLNHIDRKIQHYTCMVDILGRCGELKEAEKLIESMVVKP 494
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
N ++W LLSAC+ H D + A I ++ + +A YVLLSNI+ASA RW VS+ R
Sbjct: 495 NEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSSVSKLRV 554
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M+++ + K+PG SW+ I+ + H+F GD+ P + I LE L ++K GYVPD +
Sbjct: 555 KMKQKGIMKKPGSSWVVIRGKKHEFFSGDR--PHCLRIFEKLEFLREKLKELGYVPDYRS 612
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKN 405
+HD++ E+KE L +HSE+LAIAF G V + K IS +
Sbjct: 613 ALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSTVTVMKNLRVCEDCHTVIKLISRVVG 672
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
+I++RD +RFHHF+NG CSCGDYW
Sbjct: 673 CKIVLRDPTRFHHFKNGMCSCGDYW 697
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 137/269 (50%), Gaps = 2/269 (0%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ A +++ H Y++ G + + K+ + MP +NVI+W T+I G QN + + L+ + M
Sbjct: 158 DIAAWNAMVHGYLQFGKVDDALKLFKQMPRKNVISWTTMICGLDQNERSGEALNLFKNML 217
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+ TF VI++C+ G Q+H ++K+G + V +SLI++Y+ C +
Sbjct: 218 RCCIKSTSRTFTCVITACANAPAFHMGTQVHGFIIKSGFLYEEYVTASLITLYANCKRTE 277
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
DS K F E + V +W+++++ Y + K E+A+N+F +M + N TF S L +CS
Sbjct: 278 DSRKVFGEMVHEKVAVWTALLSGYSLNRKHEDALNVFSEMIRNSILPNQSTFASGLNSCS 337
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
G + G E + VK + VV + G +++A ++ + K + + W
Sbjct: 338 ALGTLDWGKEIHGVAVKLGLGTVAFVGNSLVV-MYSDSGNVNDAVSVFIEI-FKKSIVSW 395
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQ 273
+++ C H A I +++ +N +
Sbjct: 396 NSIIVGCAQHGRGKWAFVIFGQMIRLNKE 424
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 124/258 (48%), Gaps = 20/258 (7%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDK--I 73
Y +S LV+ + MP+R+V++W ++I+G + G + + ++ M P++ +
Sbjct: 76 YTRSNRLVDALNLFDEMPLRDVVSWNSMISGCVECGDIDTAVKMFDEM------PERSVV 129
Query: 74 TFVSVISSCSELATLGQGQQIHAEV-VKAGASLDVGVISSLISMYSRCGCLDDSVKTFLE 132
++ ++++ C + Q +++ ++ VK D+ ++++ Y + G +DD++K F +
Sbjct: 130 SWTAMVNGCFRFGMVDQAERLFCQMPVK-----DIAAWNAMVHGYLQFGKVDDALKLFKQ 184
Query: 133 CEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKG 192
+V+ W++MI + + EA+NLF+ M + ++ TF ++ AC++ G
Sbjct: 185 MPRKNVISWTTMICGLDQNERSGEALNLFKNMLRCCIKSTSRTFTCVITACANAPAFHMG 244
Query: 193 MEFFDLMVKKYRRKPRLEHYTC--VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+ ++K E Y ++ L C +++ + M V +W LLS
Sbjct: 245 TQVHGFIIKS---GFLYEEYVTASLITLYANCKRTEDSRKVFGEM-VHEKVAVWTALLSG 300
Query: 251 CKTHKSTDMAGRIAEEIL 268
++ + A + E++
Sbjct: 301 YSLNRKHEDALNVFSEMI 318
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 10/152 (6%)
Query: 97 EVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEE 156
EV S V + + +IS Y+R L D++ F E DVV W+SMI+ G +
Sbjct: 56 EVFDQVPSPHVSLYTKMISGYTRSNRLVDALNLFDEMPLRDVVSWNSMISGCVECGDIDT 115
Query: 157 AINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVV 216
A+ +F++M ++ V++ +++ C G+ ++ F M K + + +V
Sbjct: 116 AVKMFDEMPERSV----VSWTAMVNGCFRFGMVDQAERLFCQMPVK-----DIAAWNAMV 166
Query: 217 DLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
+ G +D+A L + MP K N I W T++
Sbjct: 167 HGYLQFGKVDDALKLFKQMPRK-NVISWTTMI 197
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 61/116 (52%), Gaps = 9/116 (7%)
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
LD++ + F + V L++ MI+ Y + +A+NLF++M ++ V++ S++
Sbjct: 51 LDEAREVFDQVPSPHVSLYTKMISGYTRSNRLVDALNLFDEMPLRDV----VSWNSMISG 106
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
C CG + ++ FD M ++ + +T +V+ R G +D+A L MPVK
Sbjct: 107 CVECGDIDTAVKMFDEMPER-----SVVSWTAMVNGCFRFGMVDQAERLFCQMPVK 157
>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
Length = 627
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 161/439 (36%), Positives = 252/439 (57%), Gaps = 14/439 (3%)
Query: 6 LVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRM 65
+V+ +SL + G + E + MP R+ ++W +I G + L+ + M+
Sbjct: 189 VVSWTSLLSGLARLGQVDEARDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREMQY 248
Query: 66 VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD 125
D+ T VSVI++C++L L G+ + + + G +D V ++LI MYS+CG ++
Sbjct: 249 SNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIER 308
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
++ F + D W+++I +G EEAI +F +M + ++VTF+ +L AC+H
Sbjct: 309 ALDVFKGMHHRDKFTWTAIILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVLTACTH 368
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
GL +KG EFF M++ Y P + HY C++DLLGR G + EA I MP+ N+ IW
Sbjct: 369 AGLVDKGREFFLSMIEAYNIAPNVVHYGCIIDLLGRAGKITEALDTIDQMPMTPNSTIWG 428
Query: 246 TLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERN 305
TLL+AC+ H ++++ +AE +L ++P+++ Y+LLSNI+A RW+ V R A+ E+
Sbjct: 429 TLLAACRVHGNSEIGELVAERLLELDPENSMVYILLSNIYAKCNRWEDVRRLRHAIMEKG 488
Query: 306 VKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMD 365
+KKEPG S +E+ +H+F GD+SHP S EI LE + S++ GY PD ++
Sbjct: 489 IKKEPGCSLIEMDGIIHEFVAGDQSHPMSKEIYSKLESIISDLNNVGYFPDVTEVFVEVA 548
Query: 366 SEEKEYNLKHHSEKLAIAFA----------EHTRGLIVML----PFKYISEIKNREIIVR 411
+EK+ L HSEKLAIAFA + L + L K IS + RE++VR
Sbjct: 549 EKEKKKVLYWHSEKLAIAFALLSSKPNTVIRIVKNLRMCLDCHNAIKLISRLYGREVVVR 608
Query: 412 DASRFHHFRNGKCSCGDYW 430
D +RFHHFR+G CSC DYW
Sbjct: 609 DRTRFHHFRHGFCSCKDYW 627
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 102/230 (44%), Gaps = 33/230 (14%)
Query: 38 IAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSE-LATLGQGQQIHA 96
+AW LI+G + G + + M G P +T+VSV+S+C + + G Q+H
Sbjct: 88 VAWNALISGHNRGGRFGESCGSFVDMARAGAAPTPVTYVSVLSACGKGTRDVLLGMQVHG 147
Query: 97 EVVKAGASLDVGVISSLISMYSRC-------------------------------GCLDD 125
VV +G D+ V ++L+ MY+ C G +D+
Sbjct: 148 RVVGSGVLPDLRVENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQVDE 207
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
+ F D V W++MI Y + + EA+ +F +M+ A++ T VS++ AC+
Sbjct: 208 ARDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITACAQ 267
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM 235
G E G E+ + + + K ++D+ +CG ++ A + + M
Sbjct: 268 LGALEMG-EWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGM 316
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 96/188 (51%), Gaps = 3/188 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G ++D G++L MY K GS+ V + M R+ W +I G A NG E+ ++ +
Sbjct: 285 GIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRDKFTWTAIILGLAVNGYEEEAIEMF 344
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSR 119
+ M V PD++TF+ V+++C+ + +G++ +++A + +V +I + R
Sbjct: 345 HRMIRVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMIEAYNIAPNVVHYGCIIDLLGR 404
Query: 120 CGCLDDSVKTFLECEYS-DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
G + +++ T + + + +W +++AA HG E + E++ + + E N + ++
Sbjct: 405 AGKITEALDTIDQMPMTPNSTIWGTLLAACRVHGNSEIGELVAERLLELDPE-NSMVYIL 463
Query: 179 LLYACSHC 186
L + C
Sbjct: 464 LSNIYAKC 471
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 116/266 (43%), Gaps = 22/266 (8%)
Query: 54 EDVLDQYNLMRMVGFRPDKITFVSVISSCSELA----TLGQGQQIHAEVVKAGASLDVGV 109
ED + Y M G RPD TF +++ + + A + + +HA VV+ G + V
Sbjct: 1 EDAVAGYARMLARGGRPDAYTFPALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHV 60
Query: 110 ISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEF 169
SSL++ Y+ G + EC+ V W+++I+ + G+ E+ F M +
Sbjct: 61 ASSLVAAYTAGGDGAAARALVGECDTP--VAWNALISGHNRGGRFGESCGSFVDMARAGA 118
Query: 170 EANDVTFVSLLYACSHCGLKEK--GMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDE 227
VT+VS+L AC G ++ GM+ +V P L +VD+ C +
Sbjct: 119 APTPVTYVSVLSACGK-GTRDVLLGMQVHGRVVGS-GVLPDLRVENALVDMYAECADMGS 176
Query: 228 AAALIRNMPVKANAIIWKTLLSAC----KTHKSTDMAGRIAEEILGVNPQDAAPYVLLSN 283
A + M V+ + + W +LLS + ++ D+ R+ E +D + + +
Sbjct: 177 AWKVFDGMQVR-SVVSWTSLLSGLARLGQVDEARDLFDRMPE-------RDTVSWTAMID 228
Query: 284 IHASAKRWQGVSEFREAMRERNVKKE 309
+ A R++ E M+ NV +
Sbjct: 229 GYVWAARFREALEMFREMQYSNVSAD 254
>gi|357160830|ref|XP_003578890.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Brachypodium distachyon]
Length = 631
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 161/441 (36%), Positives = 258/441 (58%), Gaps = 24/441 (5%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G+++ +Y K + + V MP R ++ W +L AG QNGL E+ L + + G
Sbjct: 196 GTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYVQNGLHEEALHLFRCAQREGV 255
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
+ T +++S+C+ LA +G Q+HA ++K G + V +SL+ +Y+RCG ++ +
Sbjct: 256 ELTEFTLSAILSACASLALKIEGIQLHAVILKCGFHGNFFVAASLVDVYARCGQIEKAYA 315
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F E+ +VV+W++MIA++ H EA+ LFE+M+Q N+VT++S+L CSH GL
Sbjct: 316 LFAYMEHKNVVIWNAMIASFSRHAHSWEAMILFEKMQQLGIFPNEVTYLSVLSVCSHAGL 375
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
EKG +F L++ +P + HY+C+VD+LGR G DEA L+ MP + A +W +LL
Sbjct: 376 VEKGRHYFSLLMSDRTVEPNVLHYSCMVDVLGRSGKTDEAWELLNKMPFEPTASMWGSLL 435
Query: 249 SACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKK 308
+C+ + + +A AE++ + P + +VLLSN++A++ W+ V R+ +++ KK
Sbjct: 436 GSCRNYNNIRLARIAAEQLFQLEPDNGGNHVLLSNVYAASGNWENVLMARKYLKDSGAKK 495
Query: 309 EPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEE 368
E G SW+E K +VH F +G++ HPR +I LEE+ EM+ D+HD+ +E+
Sbjct: 496 EMGRSWIEAKGKVHVFVVGERKHPRITDIYNKLEEIYHEMRKFARRTSIECDLHDVHAEQ 555
Query: 369 KEYNLKHHSEKLAIAFAEHTRGLIVM---LPF----------------KYISEIKNREII 409
KE LKHHSEKLA++F GLI + +P K + I R +I
Sbjct: 556 KEELLKHHSEKLALSF-----GLISLPSNIPIIIHKNLRICGDCHSFMKIAAHITERLVI 610
Query: 410 VRDASRFHHFRNGKCSCGDYW 430
VRD +RFHHF++G CSCGD+W
Sbjct: 611 VRDTNRFHHFKDGSCSCGDFW 631
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 152/314 (48%), Gaps = 6/314 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D + + L ++Y K G V +M +R++++W T+IAG +G L +
Sbjct: 87 GLVTDTLTCNILINLYTKCGRNDCARLVFDIMHVRSIVSWNTMIAGYTHSGEDVQALKLF 146
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M G + T S I +C+ + + +Q+H +K + V ++++ +Y++C
Sbjct: 147 SRMHREGTHMSEFTLSSTICACAAKYAINECKQLHTIALKLALDSNSFVGTAILDVYAKC 206
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
+ D+ F + +V WSS+ A Y +G EEA++LF +++ E + T ++L
Sbjct: 207 NMIKDACWVFEKMPERTLVTWSSLFAGYVQNGLHEEALHLFRCAQREGVELTEFTLSAIL 266
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+ LK +G++ +++K + +VD+ RCG +++A AL M K N
Sbjct: 267 SACASLALKIEGIQLHAVILKCGFHGNFFVAAS-LVDVYARCGQIEKAYALFAYMEHK-N 324
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
+IW ++++ H + A + E++ LG+ P + +LS + +G F
Sbjct: 325 VVIWNAMIASFSRHAHSWEAMILFEKMQQLGIFPNEVTYLSVLSVCSHAGLVEKGRHYFS 384
Query: 299 EAMRERNVKKEPGV 312
M +R V EP V
Sbjct: 385 LLMSDRTV--EPNV 396
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 80/179 (44%), Gaps = 6/179 (3%)
Query: 76 VSVISS----CSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFL 131
VS IS C++ +L G+ H + G D + LI++Y++CG D + F
Sbjct: 57 VSAISQRLQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLVFD 116
Query: 132 ECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEK 191
+V W++MIA Y G+ +A+ LF +M ++ ++ T S + AC+ +
Sbjct: 117 IMHVRSIVSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAINE 176
Query: 192 GMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+ + +K T ++D+ +C + +A + MP + + W +L +
Sbjct: 177 CKQLHTIALKLALDSNSFVG-TAILDVYAKCNMIKDACWVFEKMPER-TLVTWSSLFAG 233
>gi|326497745|dbj|BAK05962.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 742
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 167/434 (38%), Positives = 248/434 (57%), Gaps = 24/434 (5%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y K G + + M +VI + +LI G G + L + MR G D T
Sbjct: 314 YCKVGHVDIARSLFDQMEDHDVITFNSLITGYIHGGRLREALLLFTKMRRHGLGADNFTM 373
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
V ++++ + L L QG+ +HA + + DV + ++L+ MY +CG +++++ F +
Sbjct: 374 VGLLTASASLGALPQGRALHACIEQRLVERDVYLGTALLDMYMKCGRVEEAMVAFKQMSV 433
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
DV WS+MI F+G G+ A+ F M+ F AN VT++++L ACSH L ++G +
Sbjct: 434 RDVHTWSAMIGGLAFNGMGKAALEHFFWMKCDGFHANSVTYIAVLTACSHSCLLDEGRLY 493
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK 255
FD M + +P++EHY C++DLLGR G LDEA L++ MP++ NA+IW ++LSAC+ HK
Sbjct: 494 FDEMRLLHNIRPQIEHYGCMIDLLGRSGLLDEAMDLVQTMPMQPNAVIWASILSACRVHK 553
Query: 256 STDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWL 315
+ D+A A +L + P + A YV + NI+ +++W+ S+ R M +R VKK G S +
Sbjct: 554 NVDLAQNAAHHLLKLEPAEDAVYVQMYNIYIDSRQWEDASKIRRLMEKRGVKKTAGYSSI 613
Query: 316 EIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKH 375
+ QVH+F +GD+SHP+ EI + +EE+ +K GY P T D+D EEKE L
Sbjct: 614 AVAGQVHKFIVGDRSHPQIAEIVVMMEEIGRRLKSAGYSPITSQITVDVDEEEKEQALLA 673
Query: 376 HSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREIIVRDASRF 416
HSEKLAIAF GL+ + P K IS + NREIIVRD SRF
Sbjct: 674 HSEKLAIAF-----GLVSLAPNLPVHIIKNLRVCEDCHSAIKLISRLWNREIIVRDRSRF 728
Query: 417 HHFRNGKCSCGDYW 430
HHFR G CSC D+W
Sbjct: 729 HHFRGGVCSCNDFW 742
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 125/266 (46%), Gaps = 33/266 (12%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+VA +++ K G L + +++ P+RNV+ W LI+G ++ G A + +D +N M
Sbjct: 170 DVVAWTTVISGLAKMGLLDDARRLLARAPVRNVVTWTGLISGYSRAGRAAEAVDCFNSML 229
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG--- 121
G PD++T + ++S+C +L L G +H V + ++ +LI MY++CG
Sbjct: 230 SDGIAPDEVTVIGMLSACGQLKDLNFGCSLHMLVGDKRMLMSDKLVVALIDMYAKCGDTG 289
Query: 122 -------------------------C----LDDSVKTFLECEYSDVVLWSSMIAAYGFHG 152
C +D + F + E DV+ ++S+I Y G
Sbjct: 290 RAREVFDALGRGRGPQPWNAMIDGYCKVGHVDIARSLFDQMEDHDVITFNSLITGYIHGG 349
Query: 153 KGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY 212
+ EA+ LF +M + A++ T V LL A + G +G + ++ + +
Sbjct: 350 RLREALLLFTKMRRHGLGADNFTMVGLLTASASLGALPQGRALHACIEQRLVERD-VYLG 408
Query: 213 TCVVDLLGRCGYLDEAAALIRNMPVK 238
T ++D+ +CG ++EA + M V+
Sbjct: 409 TALLDMYMKCGRVEEAMVAFKQMSVR 434
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 88/179 (49%), Gaps = 3/179 (1%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E D+ G++L MYMK G + E + M +R+V W +I G A NG+ + L+ +
Sbjct: 402 ERDVYLGTALLDMYMKCGRVEEAMVAFKQMSVRDVHTWSAMIGGLAFNGMGKAALEHFFW 461
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEV-VKAGASLDVGVISSLISMYSRCG 121
M+ GF + +T+++V+++CS L +G+ E+ + + +I + R G
Sbjct: 462 MKCDGFHANSVTYIAVLTACSHSCLLDEGRLYFDEMRLLHNIRPQIEHYGCMIDLLGRSG 521
Query: 122 CLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
LD+++ + V+W+S+++A H + A N + + E A D +V +
Sbjct: 522 LLDEAMDLVQTMPMQPNAVIWASILSACRVHKNVDLAQNAAHHLLKLE-PAEDAVYVQM 579
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 10/170 (5%)
Query: 60 YNLMRMVGFRPDKITFVSVISSCSEL-ATLGQGQQIHAEVVKAGASLDVGVISS-LISMY 117
Y M V PD TF + C+ A + G+ +HA + V +I+S +I MY
Sbjct: 91 YRRMHGVDVPPDAFTFHFLFKCCARGGAHVLLGRMLHAACFRTLLPSAVPLIASPIIHMY 150
Query: 118 SRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
+ G D+ + F E DVV W+++I+ G ++A L + + N VT+
Sbjct: 151 AELGLPGDARRAFDEASVKDVVAWTTVISGLAKMGLLDDARRLLARAPVR----NVVTWT 206
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDE 227
L+ S G + ++ F+ M+ + V+ +L CG L +
Sbjct: 207 GLISGYSRAGRAAEAVDCFNSMLSDGIAPDEVT----VIGMLSACGQLKD 252
>gi|147838430|emb|CAN76592.1| hypothetical protein VITISV_020294 [Vitis vinifera]
Length = 978
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 168/448 (37%), Positives = 256/448 (57%), Gaps = 18/448 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G++ D+V ++L Y +G + KV MP R++++W ++I+ Q GL E+ L Y
Sbjct: 531 GYDQDVVLCTNLIRSYAGNGLIETAHKVFEEMPARDLVSWNSMISCYCQTGLHEEALKMY 590
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ MR+ D T VS++SSC+ + L G Q+H + ++ V ++LI MY++C
Sbjct: 591 DQMRISNVGFDGFTLVSLLSSCAHVGALHMGVQMHRFAGERRLVENIFVGNALIDMYAKC 650
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L ++ F DV W+SMI YG HG+G+EAI F M N +TF+ LL
Sbjct: 651 GSLASALSIFNSMPKRDVFTWNSMIVGYGVHGRGDEAITFFGSMLMAGVRPNSITFLGLL 710
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
CSH GL ++G+++F +M ++ KP ++HY C+VDL GR G L EA +IR+ P + +
Sbjct: 711 CGCSHQGLVKEGVQYFHMMSSEFNLKPGIKHYGCMVDLFGRAGKLKEALEVIRSSPSQHD 770
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
++W+TLL +CK H++ ++ ++ + A VLLS I+A AK QGV+ R+
Sbjct: 771 PVLWRTLLGSCKIHRNVEIGEMAMRNLVQLGSLGAGDCVLLSGIYAEAKDLQGVARMRKL 830
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
++ R +K PG SW+E+ +QVH+F + DKSHP S EI LEE+ L GY + +
Sbjct: 831 IQSRGIKTTPGWSWIEVGDQVHRFVVDDKSHPDSREIYRKLEEVIHRASLVGYAMEESSL 890
Query: 361 MHDMDSEEKEY----NLKHHSEKLAIAFA-----EHTRGLIVMLP---------FKYISE 402
+ +S +EY + +HSEKLAIA+ E T LIV K++S+
Sbjct: 891 VAAPESNTQEYCWETSTSYHSEKLAIAYGLARTPEGTSLLIVKNLRVCRDCHNFTKFVSK 950
Query: 403 IKNREIIVRDASRFHHFRNGKCSCGDYW 430
+REIIVRD RFHHFR G CSC ++W
Sbjct: 951 AFDREIIVRDRVRFHHFRGGHCSCKEFW 978
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 136/299 (45%), Gaps = 9/299 (3%)
Query: 19 SGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNG--LAEDVLDQYNLMRMVGF-RPDKITF 75
SGSL + V + AW ++I G +Q+ L + YN M RPD TF
Sbjct: 445 SGSLAYAQLVFHRIHNPQTPAWNSMIRGFSQSPSPLQLQAIVFYNHMLSASHARPDTYTF 504
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
++ +C E G+ +++H +++ G DV + ++LI Y+ G ++ + K F E
Sbjct: 505 SFLLKACEEAKEEGKCREVHGFIIRFGYDQDVVLCTNLIRSYAGNGLIETAHKVFEEMPA 564
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
D+V W+SMI+ Y G EEA+ +++QM + T VSLL +C+H G G++
Sbjct: 565 RDLVSWNSMISCYCQTGLHEEALKMYDQMRISNVGFDGFTLVSLLSSCAHVGALHMGVQM 624
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK 255
++ R + ++D+ +CG L A ++ +MP K + W +++ H
Sbjct: 625 HRFAGER-RLVENIFVGNALIDMYAKCGSLASALSIFNSMP-KRDVFTWNSMIVGYGVHG 682
Query: 256 STDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGV 312
D A +L GV P LL +GV F E N+K PG+
Sbjct: 683 RGDEAITFFGSMLMAGVRPNSITFLGLLCGCSHQGLVKEGVQYFHMMSSEFNLK--PGI 739
>gi|302802241|ref|XP_002982876.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
gi|300149466|gb|EFJ16121.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
Length = 923
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 160/436 (36%), Positives = 246/436 (56%), Gaps = 15/436 (3%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L MY + GSL + ++ M RNVI+W ++ +Q GL + L + + + G
Sbjct: 488 NALVTMYARLGSLEDAREIFDAMTTRNVISWTAMVGVHSQLGLNREALRIFRSILLEGVA 547
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P+++TF +V+++C LA++ + + A + + G +V V + L+ +CG L++
Sbjct: 548 PNEVTFTAVLNACGNLASIPAAKLVQACLSETGFFGNVEVANGLLCTLGKCGSLEEVANF 607
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F + V W++ IAA HG G + LF+ M+ + + VT + +L +CSH GL
Sbjct: 608 FQVMAVKNQVSWNTAIAANAQHGNGVRGVELFQTMQLEGIDTGSVTLIGVLSSCSHAGLV 667
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII-WKTLL 248
+G +F M Y EHY+CV+DLL R G+L+ A ++ +P ++ W TLL
Sbjct: 668 AQGYSYFLNMHVDYGFPAEAEHYSCVIDLLSRAGWLEHAEEFVKRLPFGDQSVFPWITLL 727
Query: 249 SACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKK 308
CK H + GR + ILG+NP PY+++ N++A A +W + R++M E KK
Sbjct: 728 CGCKLHGDLERGGRATQRILGLNPGSTGPYLVMHNLYAGAGKWPEAAAVRKSMVELGPKK 787
Query: 309 EPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEE 368
EPG+SW+E+K ++H+F +GD SHPRS EI LE L EMK G+V D A ++D+ ++E
Sbjct: 788 EPGLSWIEVKGRIHEFRVGDTSHPRSSEIHRELERLNEEMKRAGFVCDIKAVVYDLQAKE 847
Query: 369 KEYNLKHHSEKLAIAFAEHTRG----LIVMLPF----------KYISEIKNREIIVRDAS 414
KE L HSEKLAIAF + L +M K+IS + REI+VRDA
Sbjct: 848 KESLLCQHSEKLAIAFGLISTAAGEPLRIMKNLRVCSDCHSATKFISGLVGREIVVRDAY 907
Query: 415 RFHHFRNGKCSCGDYW 430
RFHHFR G CSC D+W
Sbjct: 908 RFHHFRGGACSCEDFW 923
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 134/274 (48%), Gaps = 16/274 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E+ G+ L MY K GS E V + + ++V+AW +LI A++G ++ +
Sbjct: 70 GIEVGDFLGARLLAMYCKCGSPEEARAVFQGIQDKSVVAWTSLIGVNARSGHPKEAFHLF 129
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGA-SLDVGVISSLISMYSR 119
M++ G P+ +T+V+V+ +C + I A V G+ LDV V +++++ Y +
Sbjct: 130 REMQLQGVMPNDVTYVAVLGACGHPWEV---DTIRARVEACGSLELDVIVATAVMNAYGK 186
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG LD + F D +W++MI+ H +G+EA+ LF QM N T V+
Sbjct: 187 CGDLDSAWGVFDGILVRDAAVWNAMISLLVAHEQGDEALELFRQMRLGGVTPNKGTCVAA 246
Query: 180 LYACSHCGLKEKGMEFFD-LMVKKYRRKPRLEHYTCV----VDLLGRCGYLDEAAALIRN 234
L AC H +F + L + + R+ + T V V++ G+ G +D+A +
Sbjct: 247 LNACCH------SRDFSEALRIHAFARELAGDADTVVQTALVNMYGKFGKVDDAEEIFER 300
Query: 235 MPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL 268
+ + + + W +L+A + D A + E+L
Sbjct: 301 IQER-DVVSWNAMLTANACNGFHDKAFKCFREML 333
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 139/290 (47%), Gaps = 13/290 (4%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
+ D V ++L +MY K G + + E++ + R+V++W ++ A NG + +
Sbjct: 272 DADTVVQTALVNMYGKFGKVDDAEEIFERIQERDVVSWNAMLTANACNGFHDKAFKCFRE 331
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGA---SLDVGVISSLISMYSR 119
M +VG P +IT+V+++++C A L G + V+ G S+DV + +++++MYSR
Sbjct: 332 MLLVGELPSRITYVAILNACFLAAHLKHGDFVKTLAVEGGCGIESVDVVMGTAIMNMYSR 391
Query: 120 CGCLDDSVKTFLECE----YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVT 175
C + + L E +++W+++++ Y + + EEA +F M + V+
Sbjct: 392 CKSPKSAFSSSLLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFTIFRLMLLGGVTIDTVS 451
Query: 176 FVSLLYACSHCGLKEKGMEFFDLMVK-KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRN 234
+++ AC EKG L+ + + RK +++ +V + R G L++A +
Sbjct: 452 LMTVFNACGSSASLEKGKWIHSLLTESELTRKTPVQN--ALVTMYARLGSLEDAREIFDA 509
Query: 235 MPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLS 282
M + N I W ++ A RI IL GV P + +L+
Sbjct: 510 MTTR-NVISWTAMVGVHSQLGLNREALRIFRSILLEGVAPNEVTFTAVLN 558
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 131/260 (50%), Gaps = 16/260 (6%)
Query: 4 LDLVAGSSLAHMYMKSGS---------LVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAE 54
+D+V G+++ +MY + S L+E + R P +++ W T+++ +N E
Sbjct: 377 VDVVMGTAIMNMYSRCKSPKSAFSSSLLLEQD---RDQP--SIMMWNTVLSLYVENEQFE 431
Query: 55 DVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLI 114
+ + LM + G D ++ ++V ++C A+L +G+ IH+ + ++ + V ++L+
Sbjct: 432 EAFTIFRLMLLGGVTIDTVSLMTVFNACGSSASLEKGKWIHSLLTESELTRKTPVQNALV 491
Query: 115 SMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDV 174
+MY+R G L+D+ + F +V+ W++M+ + G EA+ +F + + N+V
Sbjct: 492 TMYARLGSLEDAREIFDAMTTRNVISWTAMVGVHSQLGLNREALRIFRSILLEGVAPNEV 551
Query: 175 TFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRN 234
TF ++L AC + + + + +E ++ LG+CG L+E A +
Sbjct: 552 TFTAVLNACGNLA-SIPAAKLVQACLSETGFFGNVEVANGLLCTLGKCGSLEEVANFFQV 610
Query: 235 MPVKANAIIWKTLLSACKTH 254
M VK N + W T ++A H
Sbjct: 611 MAVK-NQVSWNTAIAANAQH 629
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 116/254 (45%), Gaps = 39/254 (15%)
Query: 71 DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTF 130
D TF ++I C+ L L QG++IH +++ G + + + L++MY +CG +++ F
Sbjct: 39 DASTFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPEEARAVF 98
Query: 131 LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH----- 185
+ VV W+S+I G +EA +LF +M+ + NDVT+V++L AC H
Sbjct: 99 QGIQDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGACGHPWEVD 158
Query: 186 --------CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
CG E D++V T V++ G+CG LD A + + V
Sbjct: 159 TIRARVEACGSLE-----LDVIVA-----------TAVMNAYGKCGDLDSAWGVFDGILV 202
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVS 295
+ +A +W ++S H+ D A + ++ GV P L+ S
Sbjct: 203 R-DAAVWNAMISLLVAHEQGDEALELFRQMRLGGVTPNKGTCVAALNACCHS-------R 254
Query: 296 EFREAMRERNVKKE 309
+F EA+R +E
Sbjct: 255 DFSEALRIHAFARE 268
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 93/182 (51%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
ELD++ +++ + Y K G L V + +R+ W +I+ + ++ L+ +
Sbjct: 170 LELDVIVATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWNAMISLLVAHEQGDEALELFR 229
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
MR+ G P+K T V+ +++C + +IHA + D V ++L++MY + G
Sbjct: 230 QMRLGGVTPNKGTCVAALNACCHSRDFSEALRIHAFARELAGDADTVVQTALVNMYGKFG 289
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+DD+ + F + DVV W++M+ A +G ++A F +M + +T+V++L
Sbjct: 290 KVDDAEEIFERIQERDVVSWNAMLTANACNGFHDKAFKCFREMLLVGELPSRITYVAILN 349
Query: 182 AC 183
AC
Sbjct: 350 AC 351
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 71/158 (44%), Gaps = 3/158 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF ++ + L K GSL E ++M ++N ++W T IA AQ+G ++ +
Sbjct: 580 GFFGNVEVANGLLCTLGKCGSLEEVANFFQVMAVKNQVSWNTAIAANAQHGNGVRGVELF 639
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEV-VKAGASLDVGVISSLISMYSR 119
M++ G +T + V+SSCS + QG + V G + S +I + SR
Sbjct: 640 QTMQLEGIDTGSVTLIGVLSSCSHAGLVAQGYSYFLNMHVDYGFPAEAEHYSCVIDLLSR 699
Query: 120 CGCLDDSVKTFLECEYSD--VVLWSSMIAAYGFHGKGE 155
G L+ + + + D V W +++ HG E
Sbjct: 700 AGWLEHAEEFVKRLPFGDQSVFPWITLLCGCKLHGDLE 737
>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 952
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 158/407 (38%), Positives = 240/407 (58%), Gaps = 14/407 (3%)
Query: 38 IAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAE 97
I W +I G +N E+ ++ + M+ +GF+PD+ T S++ +CS L G++IH
Sbjct: 546 ITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCY 605
Query: 98 VVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEA 157
V + D+ ++L+ MY++CG L S F DV W++MI A G HG G+EA
Sbjct: 606 VFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKEA 665
Query: 158 INLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVD 217
++LFE+M + + TF +L ACSH L E+G++ F+ M + + +P EHYTCVVD
Sbjct: 666 LSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCVVD 725
Query: 218 LLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAP 277
+ R G L+EA I+ MP++ AI WK L+ C+ +K+ ++A A+++ ++P +A
Sbjct: 726 IYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAGCRVYKNVELAKISAKKLFEIDPNGSAN 785
Query: 278 YVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEI 337
YV L NI +AK W S+ R+ M+ER + K PG SW + N+VH F GDKS+ S +I
Sbjct: 786 YVTLFNILVTAKLWSEASKIRKLMKERGITKTPGCSWFHVGNRVHTFVAGDKSNMESDKI 845
Query: 338 DLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFA-EHTRGLIVMLP 396
+L+EL +++K GY PDT +HD+D EEK +L +HSEKLA+AF + G +
Sbjct: 846 YNFLDELFAKIKAAGYKPDTDYVLHDIDQEEKAESLCNHSEKLAVAFGILNLNGQSTIRV 905
Query: 397 F-------------KYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
F KY+S + I+VRD+ RFHHF+NG CSC D+W
Sbjct: 906 FKNLRICGDCHNAIKYMSNVVGVTIVVRDSLRFHHFKNGNCSCKDFW 952
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 157/345 (45%), Gaps = 37/345 (10%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D+ ++L ++Y + E + V LMP RNV+ W +L + G + L+ +
Sbjct: 373 GMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVF 432
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M + G +PD +T +S++ +CS+L L G+ IH V+ G DV V ++L+S+Y++C
Sbjct: 433 REMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKC 492
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
C+ ++ F + +V W+ ++ AY + + E+ + +F QM + E +A+++T+ ++
Sbjct: 493 VCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVI 552
Query: 181 YACSHCGLKEKGMEFFDLM----------------------------------VKKYRRK 206
C E+ ME F M V ++ +
Sbjct: 553 GGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWKD 612
Query: 207 PRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEE 266
L +VD+ +CG L + + MP+K + W T++ A H + A + E+
Sbjct: 613 WDLARTNALVDMYAKCGGLSLSRNVFDMMPIK-DVFSWNTMIFANGMHGNGKEALSLFEK 671
Query: 267 IL--GVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKE 309
+L V P A +LS S +GV F R+ V+ E
Sbjct: 672 MLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPE 716
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 128/257 (49%), Gaps = 6/257 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G ++ ++L ++Y + E + V LMP RNVI W +L + G + L+ +
Sbjct: 272 GMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVF 331
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M + G +PD + S++ +CS+L L G+ IH VK G DV V ++L+++Y+ C
Sbjct: 332 REMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANC 391
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
C+ ++ F + +VV W+S+ + Y G ++ +N+F +M + + VT +S+L
Sbjct: 392 LCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSIL 451
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC--VVDLLGRCGYLDEAAALIRNMPVK 238
+ACS + G V R + + C ++ L +C + EA + +P +
Sbjct: 452 HACSDLQDLKSGKVIHGFAV---RHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHR 508
Query: 239 ANAIIWKTLLSACKTHK 255
A W +L+A T+K
Sbjct: 509 EVA-SWNGILTAYFTNK 524
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 139/291 (47%), Gaps = 9/291 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D+ S+ + Y K + E + V LMP R+V+ W +L + G + L+ +
Sbjct: 171 GMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVF 230
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M + G +PD +T ++S+CS+L L G+ IH +K G +V V ++L+++Y C
Sbjct: 231 REMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESC 290
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
C+ ++ F + +V+ W+S+ + Y G ++ +N+F +M + + + S+L
Sbjct: 291 LCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSIL 350
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACS + G V K+ + T +V+L C + EA + MP + N
Sbjct: 351 PACSQLKDLKSGKTIHGFAV-KHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHR-N 408
Query: 241 AIIWKTLLSACKTHKSTDMAG-RIAEEIL--GVNPQDAAPYVLLSNIHASA 288
+ W + LS+C + G + E++ GV P +LS +HA +
Sbjct: 409 VVTWNS-LSSCYVNCGFPQKGLNVFREMVLNGVKPDLVT---MLSILHACS 455
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 132/289 (45%), Gaps = 3/289 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D+ G++ H Y K + +V + R+V+ W +L A G + L+ +
Sbjct: 70 GVMSDVSIGNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVF 129
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M + + + +T S++ CS+L L G++IH VV+ G DV V S+ ++ Y++C
Sbjct: 130 RKMGLNKVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKC 189
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
C+ ++ F + DVV W+S+ + Y G ++ +N+F +M + + VT +L
Sbjct: 190 LCVREAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCIL 249
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACS + G + K+ + +V+L C + EA A+ MP + N
Sbjct: 250 SACSDLQDLKSGKAIHGFAL-KHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHR-N 307
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAK 289
I W +L S C + G +G+N P + S + A ++
Sbjct: 308 VITWNSLAS-CYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQ 355
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 110/236 (46%), Gaps = 6/236 (2%)
Query: 50 NGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV 109
+GL + + Y R G +PDK F++V +C+ + +Q H + + G DV +
Sbjct: 18 HGLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSI 77
Query: 110 ISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEF 169
++ I Y +C C++ + + F + DVV W+S+ A Y G ++ +N+F +M +
Sbjct: 78 GNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKV 137
Query: 170 EANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAA 229
+AN +T S+L CS + G E +V+ + + V+ +C + EA
Sbjct: 138 KANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVS-SAFVNFYAKCLCVREAQ 196
Query: 230 ALIRNMPVKANAIIWKTLLSACKTHKSTDMAG-RIAEEIL--GVNPQDAAPYVLLS 282
+ MP + + + W + LS+C + G + E++ GV P +LS
Sbjct: 197 TVFDLMPHR-DVVTWNS-LSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILS 250
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 64/125 (51%), Gaps = 1/125 (0%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
+ DL ++L MY K G L V +MPI++V +W T+I +G ++ L +
Sbjct: 612 DWDLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKEALSLFEK 671
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAG-ASLDVGVISSLISMYSRCG 121
M + +PD TF V+S+CS + +G QI + + + + ++ +YSR G
Sbjct: 672 MLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAG 731
Query: 122 CLDDS 126
CL+++
Sbjct: 732 CLEEA 736
>gi|15231358|ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial; Flags: Precursor
gi|9294022|dbj|BAB01925.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641888|gb|AEE75409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 628
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 164/450 (36%), Positives = 257/450 (57%), Gaps = 26/450 (5%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
++ + GSSL MY K+G + E ++ +P R+V++ +IAG AQ GL E+ L+ ++
Sbjct: 184 YDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFH 243
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
+ G P+ +T+ S++++ S LA L G+Q H V++ + +SLI MYS+CG
Sbjct: 244 RLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCG 303
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM-EQKEFEANDVTFVSLL 180
L + + F + W++M+ Y HG G E + LF M ++K + + VT +++L
Sbjct: 304 NLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVL 363
Query: 181 YACSHCGLKEKGMEFFDLMVK-KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
CSH +++ G+ FD MV +Y KP EHY C+VD+LGR G +DEA I+ MP K
Sbjct: 364 SGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKP 423
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
A + +LL AC+ H S D+ + ++ + P++A YV+LSN++ASA RW V+ R
Sbjct: 424 TAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRA 483
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M ++ V KEPG SW++ + +H F D++HPR E+ ++E++ +MK GYVPD
Sbjct: 484 MMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSC 543
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVM---LPF----------------KYI 400
++D+D E+KE L HSEKLA+ F GLI +P K
Sbjct: 544 VLYDVDEEQKEKMLLGHSEKLALTF-----GLIATGEGIPIRVFKNLRICVDCHNFAKIF 598
Query: 401 SEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
S++ RE+ +RD +RFH +G CSCGDYW
Sbjct: 599 SKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 123/243 (50%), Gaps = 10/243 (4%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y K L + KV+ MP +NV++W +I+ +Q G + + L + M +P++ TF
Sbjct: 97 YGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTF 156
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
+V++SC + LG G+QIH +VK + V SSL+ MY++ G + ++ + F
Sbjct: 157 ATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPE 216
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
DVV +++IA Y G EEA+ +F ++ + N VT+ SLL A S L + G +
Sbjct: 217 RDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQA 276
Query: 196 FDLMVKKYRRKPRLEHYTC----VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSAC 251
++++ L Y ++D+ +CG L A L NMP + AI W +L
Sbjct: 277 HCHVLRR-----ELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPER-TAISWNAMLVGY 330
Query: 252 KTH 254
H
Sbjct: 331 SKH 333
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 104/216 (48%), Gaps = 10/216 (4%)
Query: 33 PIRNVIAWITLIAGKAQNG-LAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQG 91
P V+ I I+ NG L E +L+ L +GF + +++++C + L G
Sbjct: 16 PTNYVLQTILPISQLCSNGRLQEALLEMAMLGPEMGFH----GYDALLNACLDKRALRDG 71
Query: 92 QQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFH 151
Q++HA ++K + + L+ Y +C CL+D+ K E +VV W++MI+ Y
Sbjct: 72 QRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQT 131
Query: 152 GKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEH 211
G EA+ +F +M + + + N+ TF ++L +C G + L+V K+ +
Sbjct: 132 GHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIV-KWNYDSHIFV 190
Query: 212 YTCVVDLLGRCGYLDEAAALIRNMP----VKANAII 243
+ ++D+ + G + EA + +P V AII
Sbjct: 191 GSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAII 226
>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Vitis vinifera]
gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 165/435 (37%), Positives = 245/435 (56%), Gaps = 14/435 (3%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+SL MYMK G L K+ + R+V+ W +IAG A+NG A + + + M
Sbjct: 254 TSLVDMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNGRALESISMFRQMLADSVT 313
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P+ +TF S++ +CS L +L QG+ +H +++ G LDV +S I MY++CGC+ + +
Sbjct: 314 PNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYRV 373
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F + +V WS+MI +G HG EA+NLF +M N VTFVS+L ACSH G
Sbjct: 374 FCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRI 433
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
E+G F M + Y P EHY C+VDLLGR G +DEA + I NMP + A W LL
Sbjct: 434 EEGWSHFKSMSRDYGITPVEEHYACMVDLLGRAGKIDEALSFINNMPTEPGASAWGALLG 493
Query: 250 ACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKE 309
AC+ H+ ++A +A+++L + + YV+LSNI+A W+ V + R M E+ + K
Sbjct: 494 ACRIHRRAELAEEVAKKLLPLESDQSGVYVMLSNIYADVGMWEMVKKTRLKMCEKGIHKI 553
Query: 310 PGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEK 369
G + +EI+ +++ F+ D+ ++ +I+ L M+ GYVPD +HD+D E K
Sbjct: 554 VGFTSIEIEEKLYLFSSEDRFAYKNTQIESLWNSLKERMRELGYVPDLRFVLHDVDDEVK 613
Query: 370 EYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNREIIVRDASR 415
+ L HSEKLAI F G+ + + K+IS I R+II+RD R
Sbjct: 614 QEVLCGHSEKLAIVFGLLNSGEGMPIRITKNMRVCGDCHTASKFISLITRRKIIMRDVKR 673
Query: 416 FHHFRNGKCSCGDYW 430
FHH ++G CSCGDYW
Sbjct: 674 FHHVQDGVCSCGDYW 688
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 147/307 (47%), Gaps = 5/307 (1%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E D +L ++Y + GSL E KV +P++N + W +I G V + ++
Sbjct: 145 EGDPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSR 204
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAG-ASLDVGVISSLISMYSRCG 121
MR GF D +I +C + +G+ H +K + + +SL+ MY +CG
Sbjct: 205 MRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCG 264
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
LD ++K F E Y DVV+WS++IA + +G+ E+I++F QM N VTF S++
Sbjct: 265 FLDFALKLFEEISYRDVVVWSAIIAGFARNGRALESISMFRQMLADSVTPNSVTFASIVL 324
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
ACS G ++G M++ + +++YT +D+ +CG + A + +P K N
Sbjct: 325 ACSSLGSLKQGRSVHGYMIRN-GVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEK-NV 382
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVN--PQDAAPYVLLSNIHASAKRWQGVSEFRE 299
W T+++ H A + E+ VN P +LS S + +G S F+
Sbjct: 383 FSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRIEEGWSHFKS 442
Query: 300 AMRERNV 306
R+ +
Sbjct: 443 MSRDYGI 449
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 109/246 (44%), Gaps = 1/246 (0%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
L+ G + Y++ GSL K + N+ +W T++A ++N DVL + M
Sbjct: 46 SLLFGPMIFGAYIQLGSLHVASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRML 105
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G D V + +C L+ + H+ +K D V +L+++Y+ G L+
Sbjct: 106 KEGKLVDSFNLVFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLE 165
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
++ K F E + V+W MI + + LF +M + FE + L+ AC
Sbjct: 166 EAHKVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACG 225
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
+ ++G F L +KK T +VD+ +CG+LD A L + + + ++W
Sbjct: 226 NVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYR-DVVVW 284
Query: 245 KTLLSA 250
+++
Sbjct: 285 SAIIAG 290
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 103/214 (48%), Gaps = 23/214 (10%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G ELD+ +S MY K G +V +V +P +NV +W T+I G +GL + L+ +
Sbjct: 346 GVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEALNLF 405
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVI------SSLI 114
MR V P+ +TFVSV+S+CS + +G + S D G+ + ++
Sbjct: 406 YEMRSVNQLPNSVTFVSVLSACSHSGRIEEGWSHFKSM-----SRDYGITPVEEHYACMV 460
Query: 115 SMYSRCGCLDDSVKTFLECEYSD--VVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEAN 172
+ R G +D+++ +F+ ++ W +++ A H + E A + +++ E + +
Sbjct: 461 DLLGRAGKIDEAL-SFINNMPTEPGASAWGALLGACRIHRRAELAEEVAKKLLPLESDQS 519
Query: 173 DVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRK 206
V +V L + G+ E MVKK R K
Sbjct: 520 GV-YVMLSNIYADVGMWE--------MVKKTRLK 544
>gi|302805647|ref|XP_002984574.1| hypothetical protein SELMODRAFT_120669 [Selaginella moellendorffii]
gi|300147556|gb|EFJ14219.1| hypothetical protein SELMODRAFT_120669 [Selaginella moellendorffii]
Length = 369
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 159/367 (43%), Positives = 228/367 (62%), Gaps = 14/367 (3%)
Query: 78 VISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSD 137
V+ +C+ LA L G+++HA G +V V ++++ MYS+CGCLD++V+ F E D
Sbjct: 3 VLDACASLAALRDGKRVHAIARDHGVDSEVAVATAIVDMYSKCGCLDEAVEAFARIERHD 62
Query: 138 VVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFD 197
V W++M+AA+ HG + A+ F++M+++ + N VTFV LL ACSH GL E+G ++FD
Sbjct: 63 TVSWTAMLAAFAQHGHIDRALATFQRMQEQGHKPNYVTFVHLLSACSHKGLVEEGRKYFD 122
Query: 198 LMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKST 257
LM +Y P +HY C+VDLLGR GYLDEA + MP +A + K+LLSAC+++K
Sbjct: 123 LMTARYGIAPDAQHYACMVDLLGRAGYLDEAEGFLNRMPGAPHAAVLKSLLSACRSYKDV 182
Query: 258 DMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEI 317
D RIA+ +L ++ PYV+L++I+ +A +W+ + R M ER V+K+PG S +E+
Sbjct: 183 DRGERIAKRMLESFWDESMPYVVLASIYRAAGKWEEAARIRSLMVERGVRKDPGRSAIEV 242
Query: 318 KNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHS 377
+ +V +F GD SH + I L+EL+S MK GYVPDT +HD+ EEKE L HS
Sbjct: 243 EGRVFEFVAGDMSHVQMNPIRAKLQELSSAMKKAGYVPDTSLVLHDVAEEEKEQVLLWHS 302
Query: 378 EKLAIAFA--EHTRGLIVML------------PFKYISEIKNREIIVRDASRFHHFRNGK 423
EKLA+AF G + + K IS I+ R I+ RD SRFHHF NG
Sbjct: 303 EKLAVAFGLLNTPAGSPIRVIKNLRVCKDCHDAAKLISAIEQRRIVFRDLSRFHHFENGV 362
Query: 424 CSCGDYW 430
CSCGDYW
Sbjct: 363 CSCGDYW 369
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 64/127 (50%), Gaps = 1/127 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + ++ +++ MY K G L E + + + ++W ++A AQ+G + L +
Sbjct: 27 GVDSEVAVATAIVDMYSKCGCLDEAVEAFARIERHDTVSWTAMLAAFAQHGHIDRALATF 86
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQ-IHAEVVKAGASLDVGVISSLISMYSR 119
M+ G +P+ +TFV ++S+CS + +G++ + G + D + ++ + R
Sbjct: 87 QRMQEQGHKPNYVTFVHLLSACSHKGLVEEGRKYFDLMTARYGIAPDAQHYACMVDLLGR 146
Query: 120 CGCLDDS 126
G LD++
Sbjct: 147 AGYLDEA 153
>gi|298204424|emb|CBI16904.3| unnamed protein product [Vitis vinifera]
Length = 843
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 151/360 (41%), Positives = 230/360 (63%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
LD G +L MY K G + + EK+ + + V++W +I+G + +E+ ++ M
Sbjct: 463 LDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKM 522
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
+G PD T+ +++ +C+ L T+ G+QIHA+++K D + S+L+ MYS+CG +
Sbjct: 523 LEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNM 582
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
D F + D V W++M+ Y HG GEEA+ +FE M+ + + N TF+++L AC
Sbjct: 583 QDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRAC 642
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
H GL EKG+ +F M+ Y P+LEHY+CVVD++GR G + +A LI MP +A+A+I
Sbjct: 643 GHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVI 702
Query: 244 WKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
W+TLLS CK H + ++A + A IL + P+D+A YVLLSNI+A+A W V++ R+ MR
Sbjct: 703 WRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRF 762
Query: 304 RNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHD 363
+KKEPG SW+EIK++VH F +GDK+HPRS EI L+ LT EMK GY+PDT ++D
Sbjct: 763 NGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENLDVLTDEMKWVGYMPDTDFILND 822
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 112/232 (48%), Gaps = 1/232 (0%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D V+ +++ Y G + +K+ MP R+V++W +LI+G NG V+D + M
Sbjct: 107 DTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMG 166
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+G D+ TF V+ SCS L G G QIH VK G DV S+L+ MY++C LD
Sbjct: 167 RMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLD 226
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
S++ F + V WS++IA + + LF++M++ + TF S+ +C+
Sbjct: 227 CSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCA 286
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
G + +K + T +D+ +C L +A L ++P
Sbjct: 287 GLSALRLGSQLHGHALKT-DFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLP 337
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 115/254 (45%), Gaps = 24/254 (9%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ D+V GS+L MY K L + MP +N ++W +IAG QN L+ +
Sbjct: 204 GFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELF 263
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G + TF SV SC+ L+ L G Q+H +K DV + ++ + MY +C
Sbjct: 264 KEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKC 323
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
L D+ K F ++ ++++I Y KG + L E VSL
Sbjct: 324 NNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKG---LGLDE--------------VSLS 366
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV----VDLLGRCGYLDEAAALIRNMP 236
A C + + +E L V K + CV +D+ G+CG L EA + M
Sbjct: 367 GAFRACAVIKGDLE--GLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEM- 423
Query: 237 VKANAIIWKTLLSA 250
V +A+ W +++A
Sbjct: 424 VSRDAVSWNAIIAA 437
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 118/279 (42%), Gaps = 37/279 (13%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
++ +++ MY K G+LVE V M R+ ++W +IA QNG E L +
Sbjct: 396 NICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLF---- 451
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
IH ++K+ LD V +LI MYS+CG ++
Sbjct: 452 -----------------------------IHNRIIKSRLGLDSFVGIALIDMYSKCGMME 482
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ K VV W+++I+ + + EEA F +M + + ++ T+ ++L C+
Sbjct: 483 KAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCA 542
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
+ E G + ++KK + T +VD+ +CG + + + P + + + W
Sbjct: 543 NLVTVELGKQIHAQIIKKELQSDAYISST-LVDMYSKCGNMQDFQLIFEKAPNR-DFVTW 600
Query: 245 KTLLSACKTHKSTDMAGRIAE--EILGVNPQDAAPYVLL 281
++ H + A +I E ++ V P A +L
Sbjct: 601 NAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVL 639
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 87/211 (41%), Gaps = 33/211 (15%)
Query: 72 KITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD------- 124
K TF + CS+ L G+Q HA ++ V V + LI MY +C L+
Sbjct: 42 KKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFD 101
Query: 125 -----DSV-------------------KTFLECEYSDVVLWSSMIAAYGFHGKGEEAINL 160
D+V K F DVV W+S+I+ Y +G + I++
Sbjct: 102 GMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDV 161
Query: 161 FEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLG 220
F QM + + TF +L +CS G++ L V K + + ++D+
Sbjct: 162 FLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAV-KMGFDCDVVTGSALLDMYA 220
Query: 221 RCGYLDEAAALIRNMPVKANAIIWKTLLSAC 251
+C LD + +MP K N + W +++ C
Sbjct: 221 KCKKLDCSIQFFHSMPEK-NWVSWSAIIAGC 250
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 153/385 (39%), Positives = 240/385 (62%), Gaps = 1/385 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G++ + GS+L MY + G + + MP ++ ++W LI+G A+ G E L
Sbjct: 219 GYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLL 278
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ F+P T+ SV S+C+ + L QG+ +HA ++K+G L + ++L+ MY++
Sbjct: 279 WKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKA 338
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +DD+ + F DVV W++M+ HG G+E ++ FEQM + E N+++F+ +L
Sbjct: 339 GSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVL 398
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL ++G+ +F+LM KKY+ +P + HY VDLLGR G LD A IR MP++
Sbjct: 399 TACSHSGLLDEGLYYFELM-KKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPT 457
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A +W LL AC+ HK+ ++ AE ++P D+ P +LLSNI+ASA RW+ V++ R+
Sbjct: 458 AAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKM 517
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+E VKK+P SW+EI+N VH F D++HP+ EI EE++ ++K GYVPDT
Sbjct: 518 MKESGVKKQPACSWVEIENAVHLFVANDETHPQIKEIRGKWEEISGKIKEIGYVPDTSHV 577
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA 385
+ +D +E+E L++HSEKLA+AFA
Sbjct: 578 LLFVDQQEREEKLQYHSEKLALAFA 602
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 153/309 (49%), Gaps = 7/309 (2%)
Query: 6 LVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRM 65
LV + + +MY K G L + ++ MP ++++ W LIAG +QN D L + M
Sbjct: 123 LVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLR 182
Query: 66 VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD 125
+G +P+ T S++ + L G Q+HA +K G V V S+L+ MY+RCG +D
Sbjct: 183 LGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDA 242
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
+ F V W+++I+ + G+GE A++L +M++K F+ T+ S+ AC+
Sbjct: 243 AQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACAS 302
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
G E+G M+K + T ++D+ + G +D+A + + VK + + W
Sbjct: 303 IGALEQGKWVHAHMIKSGLKLIAFIGNT-LLDMYAKAGSIDDAKRVFDRL-VKPDVVSWN 360
Query: 246 TLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
T+L+ C H E++L G+ P + + +L+ S +G+ F E M++
Sbjct: 361 TMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYF-ELMKK 419
Query: 304 RNVKKEPGV 312
V EP V
Sbjct: 420 YKV--EPDV 426
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 102/192 (53%), Gaps = 5/192 (2%)
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLI-SMYSR 119
+L++ PD + ++ C+ L + QG+ +HA +V + + V+ ++I +MY++
Sbjct: 76 DLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAK 135
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CGCLDD+ + F E D+V W+++IA + + + +A+ LF QM + + N T SL
Sbjct: 136 CGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSL 195
Query: 180 LYAC-SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
L A S GL + G + + KY + + + +VD+ RCG++D A MP K
Sbjct: 196 LKASGSEHGL-DPGTQLHAFCL-KYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTK 253
Query: 239 ANAIIWKTLLSA 250
+ + W L+S
Sbjct: 254 SE-VSWNALISG 264
>gi|15218900|ref|NP_176180.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806498|sp|Q0WQW5.2|PPR85_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g59720, mitochondrial; Flags: Precursor
gi|332195486|gb|AEE33607.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 638
Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 178/464 (38%), Positives = 265/464 (57%), Gaps = 40/464 (8%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D+ + L H+Y G L KV MP R++++W ++I + G + L +
Sbjct: 181 GFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLF 240
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVK---AGASLDVGVISSLISMY 117
M+ F PD T SV+S+C+ L +L G HA +++ ++DV V +SLI MY
Sbjct: 241 REMQR-SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMY 299
Query: 118 SRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM--EQKEFEANDVT 175
+CG L + + F + D+ W++MI + HG+ EEA+N F++M +++ N VT
Sbjct: 300 CKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVT 359
Query: 176 FVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM 235
FV LL AC+H G KG ++FD+MV+ Y +P LEHY C+VDL+ R GY+ EA ++ +M
Sbjct: 360 FVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSM 419
Query: 236 PVKANAIIWKTLLSA-CKTHKSTDMAGRIAEEILGV-------NPQDAAPYVLLSNIHAS 287
P+K +A+IW++LL A CK S +++ IA I+G N + YVLLS ++AS
Sbjct: 420 PMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYAS 479
Query: 288 AKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSE 347
A RW V R+ M E ++KEPG S +EI H+F GD SHP++ +I L+ +
Sbjct: 480 ASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDR 539
Query: 348 MKLRGYVPD-TGADMHDMDSE-EKEYNLKHHSEKLAIAFAEHTRGLIVMLP--------- 396
++ GY+PD + A + D ++ KEY+L+ HSE+LAIAF GLI + P
Sbjct: 540 LRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAF-----GLINLPPQTPIRIFKN 594
Query: 397 ----------FKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
K IS++ N EIIVRD RFHHF++G CSC DYW
Sbjct: 595 LRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 108/225 (48%), Gaps = 6/225 (2%)
Query: 40 WITLIAGKAQN-GLAEDVLDQYNLMRMVG-FRPDKITFVSVISSCSELATLGQGQQIHAE 97
W TLI A + E+ Y M G PDK TF V+ +C+ + +G+Q+H +
Sbjct: 117 WNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQ 176
Query: 98 VVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEA 157
+VK G DV V + LI +Y CGCLD + K F E +V W+SMI A G+ + A
Sbjct: 177 IVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSA 236
Query: 158 INLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY--TCV 215
+ LF +M Q+ FE + T S+L AC+ G G +++K ++ +
Sbjct: 237 LQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSL 295
Query: 216 VDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMA 260
+++ +CG L A + + M K + W ++ TH + A
Sbjct: 296 IEMYCKCGSLRMAEQVFQGMQ-KRDLASWNAMILGFATHGRAEEA 339
>gi|225457427|ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 643
Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 162/431 (37%), Positives = 254/431 (58%), Gaps = 16/431 (3%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y K+G L K+ MP+++ ++W T+I G A NG + + ++ VG RP++++
Sbjct: 213 YTKAGELELARKLFLEMPVKDDVSWSTMIVGFAHNGFFYEAFGFFRELQQVGMRPNEVSL 272
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLEC-E 134
+S+C++ + G+ +H + K+G V V ++L+ YS+CG + + F E
Sbjct: 273 TGALSACADAGAIEFGKILHGFIEKSGFLWMVSVNNALLDTYSKCGNVGMARLVFERMPE 332
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGME 194
+V W+SMIA HG GEEAI LF +ME+ + + F+S+LYACSH GL EKG E
Sbjct: 333 KRSIVSWTSMIAGLAMHGYGEEAIQLFHEMEESGIRPDGIAFISILYACSHAGLIEKGYE 392
Query: 195 FFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
+F M Y +P +EHY C+VDL GR G LD+A I +MPV AIIW+TLL AC H
Sbjct: 393 YFYKMKDIYNIEPAIEHYGCMVDLYGRAGQLDKAYEFIIHMPVLPTAIIWRTLLGACSIH 452
Query: 255 KSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSW 314
+ +A R+ E + ++P ++ +VLLSNI+A A +W+ V+ R +M ++ + K PG S
Sbjct: 453 GNVKLAERVKERLSELDPNNSGDHVLLSNIYAVAGKWKDVAAVRRSMTDQRMNKTPGWSM 512
Query: 315 LEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRG-YVPDTGADMHDMDSEEKEYNL 373
+E+ ++ F G+ + + E L+E+ ++++ G Y+P+ G+ +HD++ EEKE ++
Sbjct: 513 IEVDKIMYSFVAGEVQNSITEEAYEKLKEIMLKLRVEGCYIPEVGSVLHDIEDEEKEDSV 572
Query: 374 KHHSEKLAIAF--AEHTRGLIVML------------PFKYISEIKNREIIVRDASRFHHF 419
HSEKLA+AF A +G I+ + K IS++ EI+VRD SRFH F
Sbjct: 573 SRHSEKLAVAFGIARLCKGSIIRIVKNLRVCRDCHTVMKLISKVYGLEIVVRDRSRFHSF 632
Query: 420 RNGKCSCGDYW 430
+ G CSC DYW
Sbjct: 633 KTGSCSCRDYW 643
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 111/278 (39%), Gaps = 42/278 (15%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + L G++L MY + G + +KV M NV+AW ++ + G DV
Sbjct: 136 GLDTHLFVGTTLVSMYSECGFVAFAKKVFEEMFEPNVVAWNAVVTACFRCG---DVKGAD 192
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ + FR ++ + +++ Y++
Sbjct: 193 MMFNRMPFR------------------------------------NLTSWNVMLAGYTKA 216
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L+ + K FLE D V WS+MI + +G EA F +++Q N+V+ L
Sbjct: 217 GELELARKLFLEMPVKDDVSWSTMIVGFAHNGFFYEAFGFFRELQQVGMRPNEVSLTGAL 276
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+ G E G + ++K + ++D +CG + A + MP K +
Sbjct: 277 SACADAGAIEFG-KILHGFIEKSGFLWMVSVNNALLDTYSKCGNVGMARLVFERMPEKRS 335
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAA 276
+ W ++++ H + A ++ E+ G+ P A
Sbjct: 336 IVSWTSMIAGLAMHGYGEEAIQLFHEMEESGIRPDGIA 373
>gi|414865780|tpg|DAA44337.1| TPA: hypothetical protein ZEAMMB73_255594 [Zea mays]
Length = 665
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 161/419 (38%), Positives = 241/419 (57%), Gaps = 14/419 (3%)
Query: 26 EKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSEL 85
+V M + +I+W ++A A N ++ + LM PD IT +V+ C EL
Sbjct: 247 RRVFDNMQFKELISWNAMLAVYANNEFHVKAVELFMLMEKDEVEPDSITLATVLPPCGEL 306
Query: 86 ATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMI 145
+ G++IH + + ++ + ++L+ MY+ CGCL D+ + F DV+ W+S+I
Sbjct: 307 SAFSVGKRIHEIIKRKNMCPNLLLENALMDMYASCGCLKDAREIFDLMSARDVISWTSII 366
Query: 146 AAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRR 205
+AYG HG G EA++LFE+M + E + + FV++L ACSH GL G +FD M +Y
Sbjct: 367 SAYGKHGHGREAVDLFEKMLGQGLEPDSIAFVAVLAACSHAGLLADGKHYFDSMTSRYHI 426
Query: 206 KPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAE 265
P+ EHYTC+VDLLGR G ++EA I M ++ N +W LL AC+ H + D+ A+
Sbjct: 427 IPKAEHYTCMVDLLGRAGCINEAYDFITTMLIEPNERVWGALLQACRIHSNMDIGLVAAD 486
Query: 266 EILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFT 325
+ + P+ YVLLSN++A A RW V+ R M + +KK PG S +E+ +QVH F
Sbjct: 487 NLFSLVPEQTGYYVLLSNMYARAGRWADVTSVRSVMVNKGIKKFPGTSIVELGDQVHTFH 546
Query: 326 MGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAF- 384
+GD+ HP+S I L+EL +++ GY P+ A +HD++ E+KE +L HSEKLAIAF
Sbjct: 547 IGDRCHPQSEMIYHKLDELLGKIRGMGYNPEVEATLHDVEEEDKEDHLSVHSEKLAIAFL 606
Query: 385 -AEHTRGLIVM------------LPFKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+ G I+ L K IS I REI+++D +R HH G CSCGDYW
Sbjct: 607 LLNTSPGTIIRVTMNLRTCSDCHLAAKLISIITCREIVLKDTNRIHHIVQGVCSCGDYW 665
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 140/334 (41%), Gaps = 32/334 (9%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR--PDKITFVSVISSCSELATLGQGQQ 93
+ + LI + L D L + MR G PD T+ + SCS L G Q
Sbjct: 85 TTVCFNVLIRALTASSLHRDALVLFASMRPRGPACFPDHYTYPLALKSCSASKDLLLGLQ 144
Query: 94 IHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGK 153
IH+ V K +V V S ISMYSRCG +D+ + F + DVV W++MIA + G
Sbjct: 145 IHSAVAKLRLDRNVYVAHSAISMYSRCGRPEDAYRVFDGMPHRDVVSWNAMIAGFARVGL 204
Query: 154 GEEAINLFEQMEQKEFEANDV-TFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY 212
+ AI +F+Q + D T +L A + K + F + + K L +
Sbjct: 205 FDRAIEVFKQFVVLQGSMPDAGTMAGILPAMGNA--KPDDIRFVRRVFDNMQFK-ELISW 261
Query: 213 TCVVDLLGRCGYLDEAAALIRNM---PVKANAIIWKTLLSACKTHKSTDMAGRIAEEILG 269
++ + + +A L M V+ ++I T+L C + + RI E I
Sbjct: 262 NAMLAVYANNEFHVKAVELFMLMEKDEVEPDSITLATVLPPCGELSAFSVGKRIHEII-- 319
Query: 270 VNPQDAAPYVLLSN----IHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFT 325
++ P +LL N ++AS + E + M R+V +SW I +
Sbjct: 320 -KRKNMCPNLLLENALMDMYASCGCLKDAREIFDLMSARDV-----ISWTSIIS-----A 368
Query: 326 MGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
G H R +DL+ +M +G PD+ A
Sbjct: 369 YGKHGHGRE-AVDLF-----EKMLGQGLEPDSIA 396
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 82/170 (48%), Gaps = 8/170 (4%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
+L+ ++L MY G L + ++ LM R+VI+W ++I+ ++G + +D + M
Sbjct: 327 NLLLENALMDMYASCGCLKDAREIFDLMSARDVISWTSIISAYGKHGHGREAVDLFEKML 386
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV-ISSLISMYSRCGCL 123
G PD I FV+V+++CS L G+ + + + ++ + R GC+
Sbjct: 387 GQGLEPDSIAFVAVLAACSHAGLLADGKHYFDSMTSRYHIIPKAEHYTCMVDLLGRAGCI 446
Query: 124 DDSVK--TFLECEYSDVVLWSSMIAAYGFHGKGE----EAINLFEQMEQK 167
+++ T + E ++ V W +++ A H + A NLF + ++
Sbjct: 447 NEAYDFITTMLIEPNERV-WGALLQACRIHSNMDIGLVAADNLFSLVPEQ 495
>gi|5080805|gb|AAD39314.1|AC007258_3 Hypothetical protein [Arabidopsis thaliana]
Length = 615
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 178/464 (38%), Positives = 265/464 (57%), Gaps = 40/464 (8%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D+ + L H+Y G L KV MP R++++W ++I + G + L +
Sbjct: 158 GFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLF 217
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVK---AGASLDVGVISSLISMY 117
M+ F PD T SV+S+C+ L +L G HA +++ ++DV V +SLI MY
Sbjct: 218 REMQR-SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMY 276
Query: 118 SRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM--EQKEFEANDVT 175
+CG L + + F + D+ W++MI + HG+ EEA+N F++M +++ N VT
Sbjct: 277 CKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVT 336
Query: 176 FVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM 235
FV LL AC+H G KG ++FD+MV+ Y +P LEHY C+VDL+ R GY+ EA ++ +M
Sbjct: 337 FVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSM 396
Query: 236 PVKANAIIWKTLLSA-CKTHKSTDMAGRIAEEILGV-------NPQDAAPYVLLSNIHAS 287
P+K +A+IW++LL A CK S +++ IA I+G N + YVLLS ++AS
Sbjct: 397 PMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYAS 456
Query: 288 AKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSE 347
A RW V R+ M E ++KEPG S +EI H+F GD SHP++ +I L+ +
Sbjct: 457 ASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDR 516
Query: 348 MKLRGYVPD-TGADMHDMDSE-EKEYNLKHHSEKLAIAFAEHTRGLIVMLP--------- 396
++ GY+PD + A + D ++ KEY+L+ HSE+LAIAF GLI + P
Sbjct: 517 LRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAF-----GLINLPPQTPIRIFKN 571
Query: 397 ----------FKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
K IS++ N EIIVRD RFHHF++G CSC DYW
Sbjct: 572 LRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 615
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 108/225 (48%), Gaps = 6/225 (2%)
Query: 40 WITLIAGKAQN-GLAEDVLDQYNLMRMVG-FRPDKITFVSVISSCSELATLGQGQQIHAE 97
W TLI A + E+ Y M G PDK TF V+ +C+ + +G+Q+H +
Sbjct: 94 WNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQ 153
Query: 98 VVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEA 157
+VK G DV V + LI +Y CGCLD + K F E +V W+SMI A G+ + A
Sbjct: 154 IVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSA 213
Query: 158 INLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY--TCV 215
+ LF +M Q+ FE + T S+L AC+ G G +++K ++ +
Sbjct: 214 LQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSL 272
Query: 216 VDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMA 260
+++ +CG L A + + M K + W ++ TH + A
Sbjct: 273 IEMYCKCGSLRMAEQVFQGMQ-KRDLASWNAMILGFATHGRAEEA 316
>gi|357126224|ref|XP_003564788.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Brachypodium distachyon]
Length = 515
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 155/418 (37%), Positives = 239/418 (57%), Gaps = 24/418 (5%)
Query: 32 MPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQG 91
MP R+V+ W +L+ G A++G + L Y M G PD+ + +SSC+ TL G
Sbjct: 103 MPRRDVVTWTSLLTGLARSGSHDAALRVYRDMVASGVEPDEYVVAAALSSCAGSTTLELG 162
Query: 92 QQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFH 151
Q +HA V+ G + V +SL+SMY++ G L ++ K F V W+++I Y +
Sbjct: 163 QSVHATAVRLGLEPFLSVGNSLVSMYAKTGSLREARKVFDATRLRCPVTWTALIVGYAQN 222
Query: 152 GKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEH 211
G+GEE++ ++ +M + VTF+ LL+ACSH GL + G F M + P +H
Sbjct: 223 GRGEESLQVYAEMVHSGCRPDYVTFIGLLFACSHAGLVDAGRAHFKSMQADHGITPGPDH 282
Query: 212 YTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVN 271
Y C+VD+LGR G LDEA L+ +K +A +WK LL AC+TH++ ++A R AE + ++
Sbjct: 283 YACMVDVLGRAGRLDEAMELLDQSTMKLDATVWKALLGACRTHRNAELAERAAEMVWRLD 342
Query: 272 PQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSH 331
P DA PY++LSN+++ +RW V+ R M+ R + KEPG SW+ H F + D+ H
Sbjct: 343 PTDAVPYIMLSNLYSRERRWSDVARIRTLMKSRGIAKEPGCSWVVASGVTHLFYVEDRGH 402
Query: 332 PRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGL 391
PR+ EI +EE+ +++ G+V DT + D E +E L HHSE+LA+AF GL
Sbjct: 403 PRTDEIYRKVEEMMEKVRAEGFVADTDWALQDEAPEGREKGLAHHSERLAVAF-----GL 457
Query: 392 IVM-------------------LPFKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+ + + K ++++ REII+RD++ FHH R+G CSCGDYW
Sbjct: 458 LALPAGAPVRVFKNLRVCGDCHVAIKMVAKVYGREIILRDSNCFHHMRDGVCSCGDYW 515
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 91/212 (42%), Gaps = 3/212 (1%)
Query: 38 IAWITLIAGKAQNGLAEDVLDQYNLMRMV-GFRPDKITFVSVISSCSELATLGQGQQIHA 96
+A+ I+ ++ GL + L ++ MR G D+ TF +++S + L +HA
Sbjct: 7 VAYNAAISRCSRAGLHQRALALFHEMRAARGLPADEYTFPPILNSAALLRVPAAADALHA 66
Query: 97 EVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEE 156
+++AG + V ++L+ Y++ + F E DVV W+S++ G +
Sbjct: 67 LLLRAGLVAHLHVANALVDAYAKLSRGGAARALFDEMPRRDVVTWTSLLTGLARSGSHDA 126
Query: 157 AINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVV 216
A+ ++ M E ++ + L +C+ E G V + +P L +V
Sbjct: 127 ALRVYRDMVASGVEPDEYVVAAALSSCAGSTTLELGQSVHATAV-RLGLEPFLSVGNSLV 185
Query: 217 DLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
+ + G L EA + ++ + W L+
Sbjct: 186 SMYAKTGSLREARKVFDATRLRC-PVTWTALI 216
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 166/452 (36%), Positives = 254/452 (56%), Gaps = 29/452 (6%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLM--PIRNVIAWITLIAGKAQNGLAEDVLDQY 60
E DL+ + L MY K S + + +NV+ W +I G AQ+G A D L +
Sbjct: 409 EDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLF 468
Query: 61 N--LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISS-LISMY 117
+ +P+ T + +C+ L L G+Q+HA ++ +V + + LI MY
Sbjct: 469 AQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMY 528
Query: 118 SRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
S+ G +D + F + +VV W+S++ YG HG+GEEA++LF+QM++ F + +TF+
Sbjct: 529 SKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFL 588
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
+LYACSH G+ ++GM +F MVK + P EHY C+VDLLGR G L+EA LI+NM +
Sbjct: 589 VVLYACSHSGMVDQGMIYFHDMVKGFGITPGAEHYACMVDLLGRAGRLNEAMELIKNMSM 648
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEF 297
+ A++W LLSA + H + ++ A ++ + ++ Y LLSN++A+A+RW+ V+
Sbjct: 649 EPTAVVWVALLSASRIHANIELGEYAASKLTELGAENDGSYTLLSNLYANARRWKDVARI 708
Query: 298 REAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDT 357
R M+ ++K PG SW++ K F +GD+SHP S +I L +L +K GYVP T
Sbjct: 709 RSLMKHTGIRKRPGCSWIQGKKSTTTFFVGDRSHPESEQIYNLLLDLIKRIKDMGYVPQT 768
Query: 358 GADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FK 398
+HD+D EEK L HSEKLA+A+ G++ P
Sbjct: 769 SFALHDVDDEEKGDLLFEHSEKLAVAY-----GILTTAPGQPIRIHKNLRICGDCHSALT 823
Query: 399 YISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
YIS I + EI++RD+SRFHHF+ G CSC YW
Sbjct: 824 YISMIIDHEIVLRDSSRFHHFKKGSCSCRSYW 855
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 154/359 (42%), Gaps = 51/359 (14%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITL----------------- 43
G D+ G++L MY K + E KV + ++V++W +
Sbjct: 264 GLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLF 323
Query: 44 ------------------IAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSEL 85
IAG AQ G + LD + M++ G P+ +T S++S C+ +
Sbjct: 324 KMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASV 383
Query: 86 ATLGQGQQIHAEVVKAGASL-------DVGVISSLISMYSRCGCLDDSVKTF--LECEYS 136
L G+Q HA V+K +L D+ V++ LI MY++C + F +E +
Sbjct: 384 GALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDK 443
Query: 137 DVVLWSSMIAAYGFHGKGEEAINLFEQM--EQKEFEANDVTFVSLLYACSHCGLKEKGME 194
+VV W+ MI Y HG+ +A+ LF Q+ ++ + N T L AC+ G G +
Sbjct: 444 NVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQ 503
Query: 195 FFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
++ L C++D+ + G +D A A+ NM ++ N + W +L++ H
Sbjct: 504 LHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLR-NVVSWTSLMTGYGMH 562
Query: 255 KSTDMAGRIAEEI--LGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPG 311
+ A + +++ LG V+L S QG+ F + ++ + PG
Sbjct: 563 GRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVKGFGIT--PG 619
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 124/253 (49%), Gaps = 10/253 (3%)
Query: 16 YMKSGSLVEGEKVI-RLMPIRNVIAWIT-LIAGKAQNGLAEDVLDQYNLMRMVGFRPDKI 73
Y++ G+ E ++ RL+P + + W LI + GL +D L Y M+ +G+ PD
Sbjct: 69 YIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHY 128
Query: 74 TFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTF--- 130
TF V+ +C E+ +L G +HA V G +V + +S+++MY RCG LDD+ + F
Sbjct: 129 TFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEV 188
Query: 131 LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQK---EFEANDVTFVSLLYACSHCG 187
LE + D+V W+S++AAY G+ A+ + +M + + +T V++L AC+
Sbjct: 189 LERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVF 248
Query: 188 LKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTL 247
+ G + V+ +V + +C ++EA + + K + + W +
Sbjct: 249 ALQHGKQVHGFSVRNGLVDDVFVG-NALVSMYAKCSKMNEANKVFEGIK-KKDVVSWNAM 306
Query: 248 LSACKTHKSTDMA 260
++ S D A
Sbjct: 307 VTGYSQIGSFDSA 319
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 138/311 (44%), Gaps = 56/311 (18%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLM---PIRNVIAWITLIAGKAQNGLAEDVL-------DQ 59
+S+ MY + G+L + ++ + I ++++W +++A Q G + L +
Sbjct: 166 NSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNH 225
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
Y+L RPD IT V+++ +C+ + L G+Q+H V+ G DV V ++L+SMY++
Sbjct: 226 YSLK----LRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAK 281
Query: 120 CGCLDDSVKTF-------------LECEYS----------------------DVVLWSSM 144
C ++++ K F + YS DV+ WS++
Sbjct: 282 CSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAV 341
Query: 145 IAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKY- 203
IA Y G G EA+++F QM+ E N VT SLL C+ G G + ++K
Sbjct: 342 IAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNIL 401
Query: 204 -----RRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK-ANAIIWKTLLSACKTHKST 257
++ L ++D+ +C A ++ ++ K N + W ++ H
Sbjct: 402 NLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEA 461
Query: 258 DMAGRIAEEIL 268
+ A ++ +I
Sbjct: 462 NDALKLFAQIF 472
>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 160/450 (35%), Positives = 263/450 (58%), Gaps = 25/450 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+E D ++L +Y+ + + +V M +++V AW ++ G + + + +
Sbjct: 253 GYENDKHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHF 312
Query: 61 N-LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
N ++ + + D I + ++SSCS L QG+++HA +K + ++ V S++I MY+
Sbjct: 313 NKMLGIQNLKLDSIALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYAN 372
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG L+D+ + F DVV W++MIA G +G G +AI+LF QM+ + ++ TFVS+
Sbjct: 373 CGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSV 432
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
LYACSH G+ +G++ F MVK P L+HY CV+D+LGR G LD A + I NMP +
Sbjct: 433 LYACSHAGMVYEGLQIFYHMVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQP 492
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
+ ++ TLL AC+ H + + I+++I + P DA YVLLSN++A A W+GV R
Sbjct: 493 DFDVYSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRA 552
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
++R + +KK+PG S +EI +++ F G+K HP+ +I+ L+ L ++K GYVP+T
Sbjct: 553 SLRSKRMKKDPGFSSIEINQEIYTFMAGEKDHPQYFKIEGILKGLILKIKKAGYVPNTNV 612
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYI 400
+ D+ + K+ L HHSEK+AIAF GL+ P K++
Sbjct: 613 LLQDVSDDMKKDILYHHSEKMAIAF-----GLMRTKPETIIRITKNLRTCDDCHTASKFV 667
Query: 401 SEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
S++ R ++++DA+RFH F++G CSC DYW
Sbjct: 668 SKVFGRVLVIKDANRFHVFQDGVCSCRDYW 697
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 136/271 (50%), Gaps = 4/271 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + +SL + Y+ G L + +++ P +NV++W LI+G A+N + +D +
Sbjct: 51 GLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILISGLAKNDCFVEAIDVF 110
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M M F+P+ +T SV+ + + L + + +H V+ G +V V ++L+ MYS+
Sbjct: 111 REMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKF 170
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
GC+ + + F +VV W+++++ Y HG EEAI+LF M +K + T +SL+
Sbjct: 171 GCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLI 230
Query: 181 YACSHCGLKEKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
A G + G +++ Y ++ T ++D+ +D+A + M VK
Sbjct: 231 PASLSVGCLQVGTGIHGFIIRTGYENDKHIK--TALMDIYVSHNCVDDAHRVFSEMSVK- 287
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGV 270
+ W +L+ + + D A + ++LG+
Sbjct: 288 DVAAWTLMLTGFSSGRHWDRAIKHFNKMLGI 318
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 122/251 (48%), Gaps = 3/251 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE ++ ++L MY K G + ++ M RNV+ W +++G + +G +E+ +D +
Sbjct: 152 GFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLF 211
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
NLMR G D T +S+I + + L G IH +++ G D + ++L+ +Y
Sbjct: 212 NLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSH 271
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQ-KEFEANDVTFVSL 179
C+DD+ + F E DV W+ M+ + + AI F +M + + + + + +
Sbjct: 272 NCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGI 331
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L +CSH G ++G L +K + + V+D+ CG L++A M K
Sbjct: 332 LSSCSHSGALQQGRRVHALAIKTCFAN-NIFVGSAVIDMYANCGNLEDAKRFFYGMGEK- 389
Query: 240 NAIIWKTLLSA 250
+ + W +++
Sbjct: 390 DVVCWNAMIAG 400
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 88/178 (49%), Gaps = 4/178 (2%)
Query: 84 ELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSS 143
+L L QQIHA+++ +G + + + +SL++ Y CG L D+ + F Y +VV W+
Sbjct: 33 KLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTI 92
Query: 144 MIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVK-K 202
+I+ + EAI++F +M F+ N VT S+L A ++ GL V+
Sbjct: 93 LISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGG 152
Query: 203 YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMA 260
+ +E T +VD+ + G + A L +M + N + W ++S H ++ A
Sbjct: 153 FEGNVFVE--TALVDMYSKFGCMGVARQLFESMSER-NVVTWNAIVSGYSDHGFSEEA 207
>gi|8778758|gb|AAF79766.1|AC009317_25 T30E16.32 [Arabidopsis thaliana]
Length = 695
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 178/464 (38%), Positives = 265/464 (57%), Gaps = 40/464 (8%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D+ + L H+Y G L KV MP R++++W ++I + G + L +
Sbjct: 238 GFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLF 297
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVK---AGASLDVGVISSLISMY 117
M+ F PD T SV+S+C+ L +L G HA +++ ++DV V +SLI MY
Sbjct: 298 REMQR-SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMY 356
Query: 118 SRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM--EQKEFEANDVT 175
+CG L + + F + D+ W++MI + HG+ EEA+N F++M +++ N VT
Sbjct: 357 CKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVT 416
Query: 176 FVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM 235
FV LL AC+H G KG ++FD+MV+ Y +P LEHY C+VDL+ R GY+ EA ++ +M
Sbjct: 417 FVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSM 476
Query: 236 PVKANAIIWKTLLSA-CKTHKSTDMAGRIAEEILGV-------NPQDAAPYVLLSNIHAS 287
P+K +A+IW++LL A CK S +++ IA I+G N + YVLLS ++AS
Sbjct: 477 PMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYAS 536
Query: 288 AKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSE 347
A RW V R+ M E ++KEPG S +EI H+F GD SHP++ +I L+ +
Sbjct: 537 ASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDR 596
Query: 348 MKLRGYVPD-TGADMHDMDSE-EKEYNLKHHSEKLAIAFAEHTRGLIVMLP--------- 396
++ GY+PD + A + D ++ KEY+L+ HSE+LAIAF GLI + P
Sbjct: 597 LRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAF-----GLINLPPQTPIRIFKN 651
Query: 397 ----------FKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
K IS++ N EIIVRD RFHHF++G CSC DYW
Sbjct: 652 LRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 695
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 108/225 (48%), Gaps = 6/225 (2%)
Query: 40 WITLIAGKAQN-GLAEDVLDQYNLMRMVG-FRPDKITFVSVISSCSELATLGQGQQIHAE 97
W TLI A + E+ Y M G PDK TF V+ +C+ + +G+Q+H +
Sbjct: 174 WNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQ 233
Query: 98 VVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEA 157
+VK G DV V + LI +Y CGCLD + K F E +V W+SMI A G+ + A
Sbjct: 234 IVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSA 293
Query: 158 INLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY--TCV 215
+ LF +M Q+ FE + T S+L AC+ G G +++K ++ +
Sbjct: 294 LQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSL 352
Query: 216 VDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMA 260
+++ +CG L A + + M K + W ++ TH + A
Sbjct: 353 IEMYCKCGSLRMAEQVFQGMQ-KRDLASWNAMILGFATHGRAEEA 396
>gi|414879360|tpg|DAA56491.1| TPA: hypothetical protein ZEAMMB73_164599 [Zea mays]
Length = 520
Score = 314 bits (805), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 154/418 (36%), Positives = 239/418 (57%), Gaps = 24/418 (5%)
Query: 32 MPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQG 91
MP R+V+ W +L+ G A+ G + Y+ M G +PD+ + +SSC+ L G
Sbjct: 108 MPRRDVVTWTSLLTGLARAGAHGAAVRAYHGMVASGVQPDEFAVPAALSSCAASTALDLG 167
Query: 92 QQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFH 151
+ +HA V+ G V +SL+SMY++ G L D+ F + W+++I Y +
Sbjct: 168 RSVHAAAVRLGLRPFRSVENSLVSMYAKTGALRDARAVFDAMPARCTITWTALIVGYAQN 227
Query: 152 GKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEH 211
G+G +++ ++ M + + VTF+ LL+ACSH GL + G F MV Y P +H
Sbjct: 228 GRGRQSLEVYADMVRSGCRPDYVTFIGLLFACSHAGLVDAGRAHFRSMVPVYGIAPGPDH 287
Query: 212 YTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVN 271
Y C+VDLLGR G LDEA L+ + +A +WK+LL AC+ H++ ++A R AE + ++
Sbjct: 288 YACMVDLLGRAGRLDEAMDLLNRSSTELDATVWKSLLGACRVHQNAELAERAAEMVWRLD 347
Query: 272 PQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSH 331
P DA PYV+LSN+++ A+RW V+ R M+ R V KEPG SW+ + H F + D+ H
Sbjct: 348 PADAVPYVMLSNLYSRARRWGDVARIRALMKARGVTKEPGCSWVGVNGITHLFHVEDRDH 407
Query: 332 PRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGL 391
PR+ EI +EE+T +++ GYVPDT + D E ++ L +HSE+LA+AF GL
Sbjct: 408 PRAAEIYRKVEEMTERIRVEGYVPDTDWALQDEVPEWRQRGLAYHSERLAVAF-----GL 462
Query: 392 IVM-------------------LPFKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+ + K ++++ REII+RDA+ FHH ++G+CSCGDYW
Sbjct: 463 LAVPAAAPIRVFKNLRVCGDCHTAIKMVAKVYGREIILRDANCFHHMKDGECSCGDYW 520
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 79/172 (45%), Gaps = 3/172 (1%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+SL MY K+G+L + V MP R I W LI G AQNG L+ Y M G R
Sbjct: 187 NSLVSMYAKTGALRDARAVFDAMPARCTITWTALIVGYAQNGRGRQSLEVYADMVRSGCR 246
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSRCGCLDDSVK 128
PD +TF+ ++ +CS + G+ +V G + + ++ + R G LD+++
Sbjct: 247 PDYVTFIGLLFACSHAGLVDAGRAHFRSMVPVYGIAPGPDHYACMVDLLGRAGRLDEAMD 306
Query: 129 TFLECEYS-DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
D +W S++ A H E A E + + + A+ V +V L
Sbjct: 307 LLNRSSTELDATVWKSLLGACRVHQNAELAERAAEMVWRLD-PADAVPYVML 357
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 85/215 (39%), Gaps = 5/215 (2%)
Query: 37 VIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHA 96
V+A+ I+ A+ GL L + MR G R D+ T +++S ++L +
Sbjct: 9 VVAYNAAISRCARAGLYARALALFREMRGRGLRADEYTLPPLLNSAAQLRGPPEAVAALH 68
Query: 97 EVVKAGASLD-VGVISSLISMYSRCG--CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGK 153
++ + V ++L+ Y+R + F E DVV W+S++ G
Sbjct: 69 ALLLRAGLAPHLHVANALVDAYARLPHAGAAAARAVFDEMPRRDVVTWTSLLTGLARAGA 128
Query: 154 GEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYT 213
A+ + M + ++ + L +C+ + G V+ R P
Sbjct: 129 HGAAVRAYHGMVASGVQPDEFAVPAALSSCAASTALDLGRSVHAAAVRLGLR-PFRSVEN 187
Query: 214 CVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
+V + + G L +A A+ MP + I W L+
Sbjct: 188 SLVSMYAKTGALRDARAVFDAMPARCT-ITWTALI 221
>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49710-like [Cucumis sativus]
Length = 720
Score = 314 bits (805), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 170/452 (37%), Positives = 265/452 (58%), Gaps = 23/452 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGS-LVEGEKVIRLMPIRNVIAWITLIAGKA-QNGLAEDVLD 58
G+ + GS L +Y K G +++ KV + +++ W T+I+G + L+++ L+
Sbjct: 270 GYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEALE 329
Query: 59 QYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAG-ASLDVGVISSLISMY 117
+ ++ VG RPD + V VIS+CS +++ QG+Q+H +K S + V ++LI+MY
Sbjct: 330 CFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMY 389
Query: 118 SRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
S+CG L D+ F + V ++SMIA Y HG G ++++LF++M + +F ++TF+
Sbjct: 390 SKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMDFTPTNITFI 449
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
S+L AC+H G E G +F++M +K+ +P H++C++DLLGR G L EA LI +P
Sbjct: 450 SVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPF 509
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEF 297
W LL AC+ H + ++A + A +L ++P +AAPYV+L+NI++ R Q +
Sbjct: 510 DPGFFXWSALLGACRIHGNVELAIKAANRLLQLDPLNAAPYVMLANIYSDNGRLQDAASV 569
Query: 298 REAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPD- 356
R+ MR+R VKK+PG SW+E+ ++H F D HP +I YLEE+ ++K GY P+
Sbjct: 570 RKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHPMIKKIQEYLEEMMRKIKKVGYTPEV 629
Query: 357 ----TGADMHDMDSEEKEYNLKHHSEKLAIAFA-EHTRGLIVMLPF-------------K 398
G D EE E L HHSEKLA++F TR +L F K
Sbjct: 630 RSASVGGDDRVWQREE-ELRLGHHSEKLAVSFGLMSTREGEPILVFKNLRICVDCHNAIK 688
Query: 399 YISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
YISE+ REI VRD+ RFH F++G+CSCG YW
Sbjct: 689 YISEVVKREITVRDSHRFHCFKDGQCSCGGYW 720
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 128/257 (49%), Gaps = 4/257 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIR-LMPIRNVIAWITLIAGKAQNGLAEDVLDQ 59
G + + G++L Y K+G L E ++ L R+ ++W +++ Q+ L+
Sbjct: 168 GLDSYVSVGNALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALEL 227
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
Y M + G D T SV+++ + + L G Q HA+++K+G + V S LI +YS+
Sbjct: 228 YLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSK 287
Query: 120 C-GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGK-GEEAINLFEQMEQKEFEANDVTFV 177
C GC+ D K F E D+VLW++MI+ Y + +EA+ F Q++ +D + V
Sbjct: 288 CGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLV 347
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
++ ACS+ +G + L +K R+ ++ + +CG L +A L MP
Sbjct: 348 CVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMP- 406
Query: 238 KANAIIWKTLLSACKTH 254
+ N + + ++++ H
Sbjct: 407 EHNTVSYNSMIAGYAQH 423
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 136/296 (45%), Gaps = 9/296 (3%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
+ ++ + ++L Y K + ++ MP + +++ TLIA A+ G + +
Sbjct: 71 DCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLE 130
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
MR D T +I++C +G +Q+HA V G V V ++LI+ YS+ G
Sbjct: 131 MREAFLDMDGFTLSGIITACG--INVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGF 188
Query: 123 LDDSVKTF-LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
L ++ + F E D V W+SM+ AY H +G +A+ L+ +M + + T S+L
Sbjct: 189 LKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLT 248
Query: 182 ACSHCGLKEKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
A ++ G++F ++K Y + + + ++DL +CG + + +
Sbjct: 249 AFTNVQDLLGGLQFHAKLIKSGYHQNSHVG--SGLIDLYSKCGGCMLDCRKVFDEISNPD 306
Query: 241 AIIWKTLLSACKTHKS-TDMAGRIAEEILGVN--PQDAAPYVLLSNIHASAKRWQG 293
++W T++S ++ +D A ++ GV P D + ++S + QG
Sbjct: 307 LVLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQG 362
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 57/123 (46%), Gaps = 4/123 (3%)
Query: 74 TFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLEC 133
+F + +C L G+ +HA +K+ + + + +YS+C L + + F
Sbjct: 10 SFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHT 69
Query: 134 EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGM 193
+V ++++I+AY E A LF++M Q + V++ +L+ A + G +
Sbjct: 70 HDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPD----SVSYNTLIAAYARRGDTQPAF 125
Query: 194 EFF 196
+ F
Sbjct: 126 QLF 128
>gi|334182623|ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191339|gb|AEE29460.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 928
Score = 314 bits (805), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 163/436 (37%), Positives = 252/436 (57%), Gaps = 14/436 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE D +SL MY K G L + + + RN+I W ++A A +G E+VL
Sbjct: 477 GFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLV 536
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ MR G D+ +F +S+ ++LA L +GQQ+H VK G D + ++ MYS+C
Sbjct: 537 SKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKC 596
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + VK + W+ +I+A G HG EE F +M + + VTFVSLL
Sbjct: 597 GEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLL 656
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL +KG+ ++D++ + + +P +EH CV+DLLGR G L EA I MP+K N
Sbjct: 657 TACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPN 716
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
++W++LL++CK H + D + AE + + P+D + YVL SN+ A+ RW+ V R+
Sbjct: 717 DLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQ 776
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M +N+KK+ SW+++K++V F +GD++HP++MEI LE++ +K GYV DT
Sbjct: 777 MGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQA 836
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNR 406
+ D D E+KE+NL +HSE+LA+A+A G V + +K++S + R
Sbjct: 837 LQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGR 896
Query: 407 EIIVRDASRFHHFRNG 422
I++RD RFHHF G
Sbjct: 897 RIVLRDQYRFHHFERG 912
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 152/321 (47%), Gaps = 19/321 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + + G++L MY K G + E +V+ MP R+V+AW LI G A++ + L +
Sbjct: 375 GLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAF 434
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATL-GQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
MR+ G + IT VSV+S+C L +G+ +HA +V AG D V +SLI+MY++
Sbjct: 435 QTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAK 494
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG L S F + +++ W++M+AA HG GEE + L +M + +F
Sbjct: 495 CGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEG 554
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEH----YTCVVDLLGRCGYLDEAAALIRNM 235
L A + + E+G + L VK EH + D+ +CG + E +++ +
Sbjct: 555 LSAAAKLAVLEEGQQLHGLAVKL-----GFEHDSFIFNAAADMYSKCGEIGE---VVKML 606
Query: 236 PVKANAII--WKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRW 291
P N + W L+SA H + E+L G+ P LL+
Sbjct: 607 PPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVD 666
Query: 292 QGVSEFREAMRERNVKKEPGV 312
+G++ + M R+ EP +
Sbjct: 667 KGLAYYD--MIARDFGLEPAI 685
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 129/272 (47%), Gaps = 11/272 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D+ +++ H+Y G + KV MP RNV++W +L+ G + G E+V+D Y
Sbjct: 72 GLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIY 131
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
MR G ++ + VISSC L G+QI +VVK+G + V +SLISM
Sbjct: 132 KGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSM 191
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +D + F + D + W+S+ AAY +G EE+ +F M + E N T +LL
Sbjct: 192 GNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLL 251
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGR----CGYLDEAAALIRNMP 236
H ++ G L+VK + CV + L R G EA + + MP
Sbjct: 252 SVLGHVDHQKWGRGIHGLVVKM-----GFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP 306
Query: 237 VKANAIIWKTLLSA-CKTHKSTDMAGRIAEEI 267
K + I W +L+++ +S D G + I
Sbjct: 307 TK-DLISWNSLMASFVNDGRSLDALGLLCSMI 337
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 124/256 (48%), Gaps = 5/256 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ + ++L MY +G VE V + MP +++I+W +L+A +G + D L
Sbjct: 274 GFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLL 333
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G + +TF S +++C +G+ +H VV +G + + ++L+SMY +
Sbjct: 334 CSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKI 393
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + +S + L+ DVV W+++I Y ++A+ F+ M + +N +T VS+L
Sbjct: 394 GEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVL 453
Query: 181 YACSHCG-LKEKGMEFFDLMVKKYRRKPRLEHY-TCVVDLLGRCGYLDEAAALIRNMPVK 238
AC G L E+G +V EH ++ + +CG L + L + +
Sbjct: 454 SACLLPGDLLERGKPLHAYIVSAGFESD--EHVKNSLITMYAKCGDLSSSQDLFNGLDNR 511
Query: 239 ANAIIWKTLLSACKTH 254
N I W +L+A H
Sbjct: 512 -NIITWNAMLAANAHH 526
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 117/233 (50%), Gaps = 3/233 (1%)
Query: 32 MPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATL-GQ 90
MP+RN ++W T+++G + GL + ++ + M +G +P S++++C ++ +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 91 GQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGF 150
G Q+H V K+G DV V ++++ +Y G + S K F E +VV W+S++ Y
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 151 HGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLE 210
G+ EE I++++ M + N+ + ++ +C + G + +VK + +L
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKS-GLESKLA 179
Query: 211 HYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRI 263
++ +LG G +D A + M + + I W ++ +A + + + RI
Sbjct: 180 VENSLISMLGSMGNVDYANYIFDQMSER-DTISWNSIAAAYAQNGHIEESFRI 231
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 116/260 (44%), Gaps = 2/260 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E L +SL M G++ + M R+ I+W ++ A AQNG E+ +
Sbjct: 173 GLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIF 232
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+LMR + T +++S + G+ IH VVK G V V ++L+ MY+
Sbjct: 233 SLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGA 292
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ F + D++ W+S++A++ G+ +A+ L M N VTF S L
Sbjct: 293 GRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSAL 352
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC EKG L+V ++ +V + G+ G + E+ ++ MP + +
Sbjct: 353 AACFTPDFFEKGRILHGLVVVSGLFYNQIIG-NALVSMYGKIGEMSESRRVLLQMP-RRD 410
Query: 241 AIIWKTLLSACKTHKSTDMA 260
+ W L+ + D A
Sbjct: 411 VVAWNALIGGYAEDEDPDKA 430
>gi|15237442|ref|NP_199458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170604|sp|Q9FHF9.1|PP419_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g46460, mitochondrial; Flags: Precursor
gi|10177583|dbj|BAB10814.1| unnamed protein product [Arabidopsis thaliana]
gi|332008005|gb|AED95388.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 314 bits (805), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 175/445 (39%), Positives = 246/445 (55%), Gaps = 17/445 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF + +SL Y + + KV V W L++G + N ED L +
Sbjct: 255 GFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIF 314
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M P++ TF S ++SCS L TL G+++H VK G D V +SL+ MYS
Sbjct: 315 SGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDS 374
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++D+V F++ +V W+S+I HG+G+ A +F QM + E +++TF LL
Sbjct: 375 GNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLL 434
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPR-LEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
ACSHCG EKG + F M R ++HYTC+VD+LGRCG L EA LI M VK
Sbjct: 435 SACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKP 494
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
N ++W LLSAC+ H D + A I ++ + +A YVLLSNI+ASA RW VS+ R
Sbjct: 495 NEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRV 554
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M++ + K+PG SW+ I+ + H+F GD+ P I LE L ++K GY PD +
Sbjct: 555 KMKKNGIMKKPGSSWVVIRGKKHEFFSGDQ--PHCSRIYEKLEFLREKLKELGYAPDYRS 612
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKN 405
+HD++ E+KE L +HSE+LAIAF G V + K IS +
Sbjct: 613 ALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVTVMKNLRVCEDCHTVIKLISGVVG 672
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
REI++RD RFHHF+NG CSCGDYW
Sbjct: 673 REIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 132/269 (49%), Gaps = 2/269 (0%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D A +S+ H Y++ G + + K+ + MP +NVI+W T+I G QN + + LD + M
Sbjct: 158 DTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNML 217
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+ F VI++C+ G Q+H ++K G + V +SLI+ Y+ C +
Sbjct: 218 RCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIG 277
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
DS K F E + V +W+++++ Y + K E+A+++F M + N TF S L +CS
Sbjct: 278 DSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCS 337
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
G + G E + VK + VV + G +++A ++ + K + + W
Sbjct: 338 ALGTLDWGKEMHGVAVKLGLETDAFVGNSLVV-MYSDSGNVNDAVSVFIKI-FKKSIVSW 395
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQ 273
+++ C H A I +++ +N +
Sbjct: 396 NSIIVGCAQHGRGKWAFVIFGQMIRLNKE 424
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 98/189 (51%), Gaps = 14/189 (7%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDK--I 73
Y +S LV+ + MP+R+V++W ++I+G + G D +++ P++ +
Sbjct: 76 YTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECG------DMNTAVKLFDEMPERSVV 129
Query: 74 TFVSVISSCSELATLGQGQQIHAEV-VKAGASLDVGVISSLISMYSRCGCLDDSVKTFLE 132
++ ++++ C + Q +++ ++ VK D +S++ Y + G +DD++K F +
Sbjct: 130 SWTAMVNGCFRSGKVDQAERLFYQMPVK-----DTAAWNSMVHGYLQFGKVDDALKLFKQ 184
Query: 133 CEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKG 192
+V+ W++MI + + EA++LF+ M + ++ F ++ AC++ G
Sbjct: 185 MPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMG 244
Query: 193 MEFFDLMVK 201
++ L++K
Sbjct: 245 IQVHGLIIK 253
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 73/149 (48%), Gaps = 10/149 (6%)
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
+D++ + F + V L++ MI Y + +A+NLF++M ++ V++ S++
Sbjct: 51 IDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDV----VSWNSMISG 106
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
C CG ++ FD M ++ + +T +V+ R G +D+A L MPVK A
Sbjct: 107 CVECGDMNTAVKLFDEMPER-----SVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTA- 160
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEILGVN 271
W +++ D A ++ +++ G N
Sbjct: 161 AWNSMVHGYLQFGKVDDALKLFKQMPGKN 189
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 10/152 (6%)
Query: 97 EVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEE 156
EV S V + + +I+ Y+R L D++ F E DVV W+SMI+ G
Sbjct: 56 EVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNT 115
Query: 157 AINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVV 216
A+ LF++M ++ V++ +++ C G ++ F M K + +V
Sbjct: 116 AVKLFDEMPERSV----VSWTAMVNGCFRSGKVDQAERLFYQMPVK-----DTAAWNSMV 166
Query: 217 DLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
+ G +D+A L + MP K N I W T++
Sbjct: 167 HGYLQFGKVDDALKLFKQMPGK-NVISWTTMI 197
>gi|125577145|gb|EAZ18367.1| hypothetical protein OsJ_33897 [Oryza sativa Japonica Group]
Length = 730
Score = 314 bits (805), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 164/461 (35%), Positives = 268/461 (58%), Gaps = 37/461 (8%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQ--NGLAEDV-- 56
G E +L +S ++Y++ G E ++ M ++I W +I+G AQ + +D+
Sbjct: 271 GCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQA 330
Query: 57 -------LDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV 109
L + ++ +PD TF S++S CS + L QG+QIHA+ +K+G DV V
Sbjct: 331 RSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVV 390
Query: 110 ISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEF 169
S+L++MY++CGC+ D+ K FLE V W+SMI+ Y HG+ +EAI LFE+M
Sbjct: 391 NSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGV 450
Query: 170 EANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAA 229
N++TFVSLL ACS+ GL E+ +FD+M K+Y +P ++HY C++D+ R G +++A
Sbjct: 451 RPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAF 510
Query: 230 ALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAK 289
+ I+ + N IW +L++ C++H + ++A A+++L + P+ Y+LL N++ S +
Sbjct: 511 SFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYISTE 570
Query: 290 RWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMK 349
RWQ V+ R+ M++ +V SW+ IK++V+ F D++HP++ E+ LE L + K
Sbjct: 571 RWQDVARVRKLMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQATELYQLLENLLEKAK 630
Query: 350 LRGYVPDTGADMHDMDSEEKEY--NLKHHSEKLAIAFAEHTRGLIVMLP----------- 396
GY P A++ D + +EK +LKHHSE+LA+A GL+ P
Sbjct: 631 AIGYEPYQNAELSDSEDDEKPAAGSLKHHSERLAVAL-----GLLQTPPGATVRVTKNIT 685
Query: 397 --------FKYISEIKNREIIVRDASRFHHFRNGKCSCGDY 429
K S ++NREIIVRD+ R H F++G+CSCGD+
Sbjct: 686 MCRDCHSSIKLFSLLENREIIVRDSKRLHKFKDGRCSCGDF 726
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 137/288 (47%), Gaps = 16/288 (5%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNG-LAEDVLDQYNLMRMVG 67
G+SL +Y K GSL + +P +NVI W T+I+ A++ E + + M M G
Sbjct: 177 GNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGMSLFIDMLMDG 236
Query: 68 FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV 127
P++ T SV+S C L G+Q+ A K G ++ V +S + +Y R G D+++
Sbjct: 237 VMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAM 296
Query: 128 KTFLECEYSDVVLWSSMIAAYG-----------FHGKGEEAINLFEQMEQKEFEANDVTF 176
+ F + E + ++ W++MI+ Y +G +A+ +F +++ + + TF
Sbjct: 297 RLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTF 356
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
S+L CS E+G + +K + + + +V++ +CG + +A MP
Sbjct: 357 SSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVN-SALVNMYNKCGCIQDANKAFLEMP 415
Query: 237 VKANAIIWKTLLSACKTHKSTDMAGRIAEE--ILGVNPQDAAPYVLLS 282
+ + W +++S H A ++ EE + GV P + LLS
Sbjct: 416 TR-TFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLS 462
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 103/225 (45%), Gaps = 13/225 (5%)
Query: 32 MPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQG 91
MP RNV+ W L+ G N L+ + M +G P T + +++C + G
Sbjct: 99 MPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLG 158
Query: 92 QQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFH 151
+Q+H +K GA + +SL S+Y++ G LD +++ F +V+ W++MI+A
Sbjct: 159 KQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAED 218
Query: 152 GKGEE-AINLFEQMEQKEFEANDVTFVSLLYACSHCGLK-----EKGMEFFDLMVKKYRR 205
+ E ++LF M N+ T S++ S CG + K ++ F +
Sbjct: 219 EECVELGMSLFIDMLMDGVMPNEFTLTSVM---SLCGTRLDLNLGKQVQAFSFKIGCETN 275
Query: 206 KPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
P +++ T + L R G DEA L M A+ I W ++S
Sbjct: 276 LP-VKNSTMYLYL--RKGETDEAMRLFEQME-DASIITWNAMISG 316
>gi|110737061|dbj|BAF00484.1| hypothetical protein [Arabidopsis thaliana]
Length = 629
Score = 314 bits (805), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 178/464 (38%), Positives = 265/464 (57%), Gaps = 40/464 (8%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D+ + L H+Y G L KV MP R++++W ++I + G + L +
Sbjct: 172 GFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLF 231
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVK---AGASLDVGVISSLISMY 117
M+ F PD T SV+S+C+ L +L G HA +++ ++DV V +SLI MY
Sbjct: 232 REMQR-SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMY 290
Query: 118 SRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM--EQKEFEANDVT 175
+CG L + + F + D+ W++MI + HG+ EEA+N F++M +++ N VT
Sbjct: 291 CKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVT 350
Query: 176 FVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM 235
FV LL AC+H G KG ++FD+MV+ Y +P LEHY C+VDL+ R GY+ EA ++ +M
Sbjct: 351 FVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSM 410
Query: 236 PVKANAIIWKTLLSA-CKTHKSTDMAGRIAEEILGV-------NPQDAAPYVLLSNIHAS 287
P+K +A+IW++LL A CK S +++ IA I+G N + YVLLS ++AS
Sbjct: 411 PMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYAS 470
Query: 288 AKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSE 347
A RW V R+ M E ++KEPG S +EI H+F GD SHP++ +I L+ +
Sbjct: 471 ASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDR 530
Query: 348 MKLRGYVPD-TGADMHDMDSE-EKEYNLKHHSEKLAIAFAEHTRGLIVMLP--------- 396
++ GY+PD + A + D ++ KEY+L+ HSE+LAIAF GLI + P
Sbjct: 531 LRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAF-----GLINLPPQTPIRIFKN 585
Query: 397 ----------FKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
K IS++ N EIIVRD RFHHF++G CSC DYW
Sbjct: 586 LRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 629
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 108/225 (48%), Gaps = 6/225 (2%)
Query: 40 WITLIAGKAQN-GLAEDVLDQYNLMRMVG-FRPDKITFVSVISSCSELATLGQGQQIHAE 97
W TLI A + E+ Y M G PDK TF V+ +C+ + +G+Q+H +
Sbjct: 108 WNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQ 167
Query: 98 VVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEA 157
+VK G DV V + LI +Y CGCLD + K F E +V W+SMI A G+ + A
Sbjct: 168 IVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSA 227
Query: 158 INLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY--TCV 215
+ LF +M Q+ FE + T S+L AC+ G G +++K ++ +
Sbjct: 228 LQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSL 286
Query: 216 VDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMA 260
+++ +CG L A + + M K + W ++ TH + A
Sbjct: 287 IEMYCKCGSLRMAEQVFQGMQ-KRDLASWNAMILGFATHGRAEEA 330
>gi|296090522|emb|CBI40853.3| unnamed protein product [Vitis vinifera]
Length = 749
Score = 314 bits (805), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 171/428 (39%), Positives = 247/428 (57%), Gaps = 18/428 (4%)
Query: 17 MKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFV 76
+ SG L+ G +I + + + W ++I G QNG E L ++ M P+ T
Sbjct: 295 LTSGRLIHG--LIVKAGLESAVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLS 352
Query: 77 SVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYS 136
SV+ +CS LA L QG+QIHA V+K G +D V ++LI Y +CG + + F
Sbjct: 353 SVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEV 412
Query: 137 DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFF 196
DVV +SMI +Y +G G EA+ LF M+ E N+VT++ +L AC++ GL E+G F
Sbjct: 413 DVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIF 472
Query: 197 DLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKS 256
+ +HY C+VDLLGR G L EA LI + + ++ +IW+TLLSAC+ H
Sbjct: 473 SSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNI-SDVVIWRTLLSACRIHGD 531
Query: 257 TDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLE 316
+MA R+ ++ + P+D +VLLSN++AS W V E + AMRE +KK P +SW++
Sbjct: 532 VEMAKRVMNRVIDLAPEDGGTHVLLSNLYASTGNWSKVIEMKSAMREMRLKKNPAMSWVD 591
Query: 317 IKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHH 376
++ ++H F GD SHP +I LEEL ++K GYVPDT + D+D E+K +L +H
Sbjct: 592 VEREIHTFMAGDWSHPNFRDIREKLEELIEKVKELGYVPDTRFVLQDLDEEKKIRSLYYH 651
Query: 377 SEKLAIAFA----EHTRGLIVMLP-----------FKYISEIKNREIIVRDASRFHHFRN 421
SEKLA+AFA + I +L K++S+I R+II RD RFHHFRN
Sbjct: 652 SEKLAVAFALWRSNYKNTTIRILKNLRVCGDCHTWMKFVSKIVGRDIIARDVKRFHHFRN 711
Query: 422 GKCSCGDY 429
G CSCGDY
Sbjct: 712 GLCSCGDY 719
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 131/257 (50%), Gaps = 8/257 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF L G+ L Y+K GS+V KV +P R+++AW ++IA +NG +++ +D Y
Sbjct: 108 GFHHSL--GNKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIY 165
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASL-DVGVISSLISMYSR 119
M G PD+ TF SV + S+L + +GQ+ H + V G + +V V S+L+ MY++
Sbjct: 166 QRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAK 225
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G + D+ + DVVL++++I Y HG+ E++ +F M +K EAN+ T S+
Sbjct: 226 FGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSV 285
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM---P 236
L C + G L+VK +T V+ L + G + A R M
Sbjct: 286 LVCCGNLEDLTSGRLIHGLIVKAGLESAVT--WTSVIVGLVQNGREEIALLKFRQMLRSS 343
Query: 237 VKANAIIWKTLLSACKT 253
+ N+ ++L AC +
Sbjct: 344 ITPNSFTLSSVLRACSS 360
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 77/158 (48%), Gaps = 1/158 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G ++D G++L Y K GS V + +V++ ++I AQNG + L +
Sbjct: 378 GLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLF 437
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAG-ASLDVGVISSLISMYSR 119
+ M+ G P+ +T++ V+S+C+ L +G I + +G L + ++ + R
Sbjct: 438 SGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGR 497
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEA 157
G L ++ + SDVV+W ++++A HG E A
Sbjct: 498 AGRLKEAEMLINQVNISDVVIWRTLLSACRIHGDVEMA 535
>gi|225456505|ref|XP_002280974.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50990
[Vitis vinifera]
Length = 523
Score = 314 bits (805), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 163/441 (36%), Positives = 252/441 (57%), Gaps = 17/441 (3%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
DL+ + + MK G ++V R M R+V+ W ++I G +N E+ L + M
Sbjct: 86 FDLITANLIIASLMKVGEFDFAKRVFRKMLRRDVVTWNSMIGGCVRNERFEEALRFFREM 145
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
PD TF SVI+ C+ L + + +H +++ L+ + S+LI +YS+CG +
Sbjct: 146 LNSNVEPDGFTFASVINGCARLGSSHHAELVHGLMIEKKIQLNFILSSALIDLYSKCGRI 205
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
+ + K F ++ DV +W+SMI HG +AI +F QME + + +TF+ +L AC
Sbjct: 206 NTAKKVFNSIQHDDVSVWNSMINGLAIHGLALDAIGVFSQMEMESVSPDSITFIGILTAC 265
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
SHCGL E+G +FDLM + Y +P+LEHY +VDLLGR G ++EA A+I+ MP++ + +I
Sbjct: 266 SHCGLVEQGRRYFDLMRRHYSIQPQLEHYGAMVDLLGRAGLVEEAYAMIKAMPMEPDIVI 325
Query: 244 WKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
W+ LLSAC+ K+ ++ G +A I ++ ++ Y+LLSN++ S ++W RE M+
Sbjct: 326 WRALLSACRNFKNPEL-GEVA--IAKISHLNSGDYILLSNMYCSLEKWDSAERVREMMKR 382
Query: 304 RNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHD 363
V+K G SW+E+ +HQF GD+SHP + I LE L KL G++P T + D
Sbjct: 383 DGVRKNRGRSWVELGGVIHQFKAGDRSHPETGAIYKVLEGLIRRTKLEGFMPATDLVLMD 442
Query: 364 MDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVMLP------------FKYISEIKNREII 409
+ EE+E NL HSEKLA+A+ + + G + + K +S + +R II
Sbjct: 443 VSDEEREENLNSHSEKLALAYVILKTSPGTEIRVSKNLRTCHDCHCWMKILSRLLSRVII 502
Query: 410 VRDASRFHHFRNGKCSCGDYW 430
VRD RFH F G CSC DYW
Sbjct: 503 VRDRIRFHQFEGGLCSCRDYW 523
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 105/256 (41%), Gaps = 42/256 (16%)
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
N +G D ++ +C + Q HA+++K G +I+SL+S Y+ C
Sbjct: 9 NYSPFLGILSDHQKLNCILEACKFSSDFRTAFQSHAKIIKFGYGTYPSLITSLVSTYAHC 68
Query: 121 GCLDDSVKTFLECEY---------------------------------SDVVLWSSMIAA 147
CLD + + E Y DVV W+SMI
Sbjct: 69 DCLDLAHQLLDEMPYWGFDLITANLIIASLMKVGEFDFAKRVFRKMLRRDVVTWNSMIGG 128
Query: 148 YGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKP 207
+ + EEA+ F +M E + TF S++ C+ G LM++K K
Sbjct: 129 CVRNERFEEALRFFREMLNSNVEPDGFTFASVINGCARLGSSHHAELVHGLMIEK---KI 185
Query: 208 RLEHY--TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK-STDMAGRIA 264
+L + ++DL +CG ++ A + ++ + +W ++++ H + D G +
Sbjct: 186 QLNFILSSALIDLYSKCGRINTAKKVFNSIQ-HDDVSVWNSMINGLAIHGLALDAIGVFS 244
Query: 265 E-EILGVNPQDAAPYV 279
+ E+ V+P D+ ++
Sbjct: 245 QMEMESVSP-DSITFI 259
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
+L+ + S+L +Y K G + +KV + +V W ++I G A +GLA D + ++
Sbjct: 186 QLNFILSSALIDLYSKCGRINTAKKVFNSIQHDDVSVWNSMINGLAIHGLALDAIGVFSQ 245
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV--ISSLISMYSRC 120
M M PD ITF+ ++++CS + QG++ + ++++ S+ + +++ + R
Sbjct: 246 MEMESVSPDSITFIGILTACSHCGLVEQGRR-YFDLMRRHYSIQPQLEHYGAMVDLLGRA 304
Query: 121 GCLDDSVKTFLECEY-SDVVLWSSMIAA 147
G ++++ D+V+W ++++A
Sbjct: 305 GLVEEAYAMIKAMPMEPDIVIWRALLSA 332
>gi|147860852|emb|CAN83162.1| hypothetical protein VITISV_022557 [Vitis vinifera]
Length = 562
Score = 314 bits (805), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 163/441 (36%), Positives = 252/441 (57%), Gaps = 17/441 (3%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
DL+ + + MK G ++V R M R+V+ W ++I G +N E+ L + M
Sbjct: 125 FDLITANLIIASLMKVGEFDFAKRVFRKMLRRDVVTWNSMIGGCVRNERFEEALRFFREM 184
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
PD TF SVI+ C+ L + + +H +++ L+ + S+LI +YS+CG +
Sbjct: 185 LNSNVEPDGFTFASVINGCARLGSSHHAELVHGLMIEKKIQLNFILSSALIDLYSKCGRI 244
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
+ + K F ++ DV +W+SMI HG +AI +F QME + + +TF+ +L AC
Sbjct: 245 NTAKKVFNSIQHDDVSVWNSMINGLAIHGLALDAIGVFSQMEMESVSPDSITFIGILTAC 304
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
SHCGL E+G +FDLM + Y +P+LEHY +VDLLGR G ++EA A+I+ MP++ + +I
Sbjct: 305 SHCGLVEQGRRYFDLMRRHYSIQPQLEHYGAMVDLLGRAGLVEEAYAMIKAMPMEPDIVI 364
Query: 244 WKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
W+ LLSAC+ K+ ++ G +A I ++ ++ Y+LLSN++ S ++W RE M+
Sbjct: 365 WRALLSACRNFKNPEL-GEVA--IAKISHLNSGDYILLSNMYCSLEKWDSAERVREMMKR 421
Query: 304 RNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHD 363
V+K G SW+E+ +HQF GD+SHP + I LE L KL G++P T + D
Sbjct: 422 DGVRKNRGRSWVELGGVIHQFKAGDRSHPETGAIYKVLEGLIRRTKLEGFMPATDLVLMD 481
Query: 364 MDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVMLP------------FKYISEIKNREII 409
+ EE+E NL HSEKLA+A+ + + G + + K +S + +R II
Sbjct: 482 VSDEEREENLNSHSEKLALAYVILKTSPGTEIRVSKNLRTCHDCHCWMKILSRLLSRVII 541
Query: 410 VRDASRFHHFRNGKCSCGDYW 430
VRD RFH F G CSC DYW
Sbjct: 542 VRDRIRFHQFEGGLCSCRDYW 562
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 101/239 (42%), Gaps = 42/239 (17%)
Query: 78 VISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY-- 135
++ +C + Q HA+++K G +I+SL+S Y+ C CLD + + E Y
Sbjct: 65 ILEACKFSSDFRTAFQSHAKIIKFGYGTYPSLITSLVSTYAHCDCLDLAHQLLDEMPYWG 124
Query: 136 -------------------------------SDVVLWSSMIAAYGFHGKGEEAINLFEQM 164
DVV W+SMI + + EEA+ F +M
Sbjct: 125 FDLITANLIIASLMKVGEFDFAKRVFRKMLRRDVVTWNSMIGGCVRNERFEEALRFFREM 184
Query: 165 EQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY--TCVVDLLGRC 222
E + TF S++ C+ G LM++K K +L + ++DL +C
Sbjct: 185 LNSNVEPDGFTFASVINGCARLGSSHHAELVHGLMIEK---KIQLNFILSSALIDLYSKC 241
Query: 223 GYLDEAAALIRNMPVKANAIIWKTLLSACKTHK-STDMAGRIAE-EILGVNPQDAAPYV 279
G ++ A + ++ + +W ++++ H + D G ++ E+ V+P D+ ++
Sbjct: 242 GRINTAKKVFNSIQ-HDDVSVWNSMINGLAIHGLALDAIGVFSQMEMESVSP-DSITFI 298
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
+L+ + S+L +Y K G + +KV + +V W ++I G A +GLA D + ++
Sbjct: 225 QLNFILSSALIDLYSKCGRINTAKKVFNSIQHDDVSVWNSMINGLAIHGLALDAIGVFSQ 284
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV--ISSLISMYSRC 120
M M PD ITF+ ++++CS + QG++ + ++++ S+ + +++ + R
Sbjct: 285 MEMESVSPDSITFIGILTACSHCGLVEQGRR-YFDLMRRHYSIQPQLEHYGAMVDLLGRA 343
Query: 121 GCLDDSVKTFLECEY-SDVVLWSSMIAA 147
G ++++ D+V+W ++++A
Sbjct: 344 GLVEEAYAMIKAMPMEPDIVIWRALLSA 371
>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Vitis vinifera]
Length = 877
Score = 314 bits (805), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 151/360 (41%), Positives = 230/360 (63%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
LD G +L MY K G + + EK+ + + V++W +I+G + +E+ ++ M
Sbjct: 510 LDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKM 569
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
+G PD T+ +++ +C+ L T+ G+QIHA+++K D + S+L+ MYS+CG +
Sbjct: 570 LEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNM 629
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
D F + D V W++M+ Y HG GEEA+ +FE M+ + + N TF+++L AC
Sbjct: 630 QDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRAC 689
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
H GL EKG+ +F M+ Y P+LEHY+CVVD++GR G + +A LI MP +A+A+I
Sbjct: 690 GHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVI 749
Query: 244 WKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
W+TLLS CK H + ++A + A IL + P+D+A YVLLSNI+A+A W V++ R+ MR
Sbjct: 750 WRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRF 809
Query: 304 RNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHD 363
+KKEPG SW+EIK++VH F +GDK+HPRS EI L+ LT EMK GY+PDT ++D
Sbjct: 810 NGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENLDVLTDEMKWVGYMPDTDFILND 869
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 134/279 (48%), Gaps = 4/279 (1%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
++ +++ MY K G+LVE V M R+ ++W +IA QNG E L + M
Sbjct: 410 NICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWML 469
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G PD+ T+ SV+ +C+ L G +IH ++K+ LD V +LI MYS+CG ++
Sbjct: 470 QSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMME 529
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ K VV W+++I+ + + EEA F +M + + ++ T+ ++L C+
Sbjct: 530 KAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCA 589
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
+ E G + ++KK + T +VD+ +CG + + + P + + + W
Sbjct: 590 NLVTVELGKQIHAQIIKKELQSDAYISST-LVDMYSKCGNMQDFQLIFEKAPNR-DFVTW 647
Query: 245 KTLLSACKTHKSTDMAGRIAE--EILGVNPQDAAPYVLL 281
++ H + A +I E ++ V P A +L
Sbjct: 648 NAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVL 686
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 143/277 (51%), Gaps = 8/277 (2%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F D+V G++ MYMK +L + +K+ +P N+ ++ +I G A++ + L +
Sbjct: 306 FGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFR 365
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
L++ G D+++ +C+ + +G Q+H +K+ ++ V ++++ MY +CG
Sbjct: 366 LLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCG 425
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
L ++ F E D V W+++IAA+ +G E+ ++LF M Q E ++ T+ S+L
Sbjct: 426 ALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLK 485
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYT--CVVDLLGRCGYLDEAAALIRNMPVKA 239
AC+ GME + ++K + L+ + ++D+ +CG +++A L + +
Sbjct: 486 ACAGWQALNCGMEIHNRIIKS---RLGLDSFVGIALIDMYSKCGMMEKAEKL-HDRLAEQ 541
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQD 274
+ W ++S K ++ A + ++L GV+P +
Sbjct: 542 TVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDN 578
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 122/250 (48%), Gaps = 2/250 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ D+V GS+L MY K L + MP +N ++W +IAG QN L+ +
Sbjct: 204 GFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELF 263
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G + TF SV SC+ L+ L G Q+H +K DV + ++ + MY +C
Sbjct: 264 KEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKC 323
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
L D+ K F ++ ++++I Y KG EA+ +F +++ ++V+
Sbjct: 324 NNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAF 383
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+ +G++ L +K + + ++D+ G+CG L EA + M V +
Sbjct: 384 RACAVIKGDLEGLQVHGLSMKSLCQS-NICVANAILDMYGKCGALVEACLVFEEM-VSRD 441
Query: 241 AIIWKTLLSA 250
A+ W +++A
Sbjct: 442 AVSWNAIIAA 451
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 112/232 (48%), Gaps = 1/232 (0%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D V+ +++ Y G + +K+ MP R+V++W +LI+G NG V+D + M
Sbjct: 107 DTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMG 166
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+G D+ TF V+ SCS L G G QIH VK G DV S+L+ MY++C LD
Sbjct: 167 RMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLD 226
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
S++ F + V WS++IA + + LF++M++ + TF S+ +C+
Sbjct: 227 CSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCA 286
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
G + +K + T +D+ +C L +A L ++P
Sbjct: 287 GLSALRLGSQLHGHALKT-DFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLP 337
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 88/211 (41%), Gaps = 33/211 (15%)
Query: 72 KITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTF- 130
K TF + CS+ L G+Q HA ++ V V + LI MY +C L+ + K F
Sbjct: 42 KKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFD 101
Query: 131 ------------LECEYS------------------DVVLWSSMIAAYGFHGKGEEAINL 160
+ Y+ DVV W+S+I+ Y +G + I++
Sbjct: 102 GMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDV 161
Query: 161 FEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLG 220
F QM + + TF +L +CS G++ L V K + + ++D+
Sbjct: 162 FLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAV-KMGFDCDVVTGSALLDMYA 220
Query: 221 RCGYLDEAAALIRNMPVKANAIIWKTLLSAC 251
+C LD + +MP K N + W +++ C
Sbjct: 221 KCKKLDCSIQFFHSMPEK-NWVSWSAIIAGC 250
>gi|297797743|ref|XP_002866756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312591|gb|EFH43015.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 649
Score = 314 bits (805), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 162/446 (36%), Positives = 256/446 (57%), Gaps = 25/446 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D V+ +S+ Y K+G + + R M +N I+W T+I+G Q G+ ++ L ++ M+
Sbjct: 209 DAVSWNSVIKGYAKAGKMDIALTLFRKMVEKNAISWTTMISGYVQAGMHKEALQLFHEMQ 268
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
PD ++ + +S+C++L L QG+ IH+ + K +D + LI MY++CG +
Sbjct: 269 NSDVEPDNVSLANALSACAQLGALEQGKWIHSYLTKTRIRMDSVLGCVLIDMYAKCGDMG 328
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
++++ F + V W+++I+ Y +HG G EAI+ F +M++ + N +TF ++L ACS
Sbjct: 329 EALEVFKNIQRKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTTVLTACS 388
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
+ GL E+G F M + Y KP +EHY CVVDLL R G LDEA I+ MP+K NA+IW
Sbjct: 389 YTGLVEEGKLIFYNMERDYNLKPTIEHYGCVVDLLSRAGLLDEAKRFIQEMPLKPNAVIW 448
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
LL AC+ HK+ ++ I E ++ ++P YV +NIHA K+W +E R M+E+
Sbjct: 449 GALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMGKKWDKAAETRRLMKEQ 508
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
V K PG S + ++ H+F GD+SHP +I + + +++ GYVP+ + D+
Sbjct: 509 GVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWKIMRRKLEENGYVPELEDMLLDL 568
Query: 365 DSEEKEYNLKH-HSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIK 404
+++ + H HSEKLAI + GLI P K IS+I
Sbjct: 569 VDDDERETIVHQHSEKLAITY-----GLIKTKPGTTIRIMKNLRVCKDCHKVTKLISKIY 623
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
R+I++RD +RFHHFR+GKCSCGDYW
Sbjct: 624 KRDIVMRDRTRFHHFRDGKCSCGDYW 649
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 131/306 (42%), Gaps = 37/306 (12%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
+ W +I G + + E L Y M + TF S++ +CS L+ L + QIH
Sbjct: 108 DTFLWNLMIRGFSCSDEPERSLLLYQRMLCCSAPHNAYTFPSLLKACSNLSALEETTQIH 167
Query: 96 AEVVKAGASLDVGVISSLISM-------------------------------YSRCGCLD 124
A++ K G DV ++SLI+ Y++ G +D
Sbjct: 168 AQITKLGYENDVYAVNSLINSYAATGNFKLAHLLFDRIPKPDAVSWNSVIKGYAKAGKMD 227
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
++ F + + + W++MI+ Y G +EA+ LF +M+ + E ++V+ + L AC+
Sbjct: 228 IALTLFRKMVEKNAISWTTMISGYVQAGMHKEALQLFHEMQNSDVEPDNVSLANALSACA 287
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV-VDLLGRCGYLDEAAALIRNMPVKANAII 243
G E+G + K R + CV +D+ +CG + EA + +N+ K+
Sbjct: 288 QLGALEQGKWIHSYLTKTRIRMDSV--LGCVLIDMYAKCGDMGEALEVFKNIQRKS-VQA 344
Query: 244 WKTLLS--ACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
W L+S A H ++ + + +G+ P +L+ + +G F
Sbjct: 345 WTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTTVLTACSYTGLVEEGKLIFYNME 404
Query: 302 RERNVK 307
R+ N+K
Sbjct: 405 RDYNLK 410
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 80/158 (50%), Gaps = 5/158 (3%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
+D V G L MY K G + E +V + + ++V AW LI+G A +G + + ++ M
Sbjct: 309 MDSVLGCVLIDMYAKCGDMGEALEVFKNIQRKSVQAWTALISGYAYHGHGREAISKFMEM 368
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVK-AGASLDVGVISSLISMYSRCGC 122
+ +G +P+ ITF +V+++CS + +G+ I + + + ++ + SR G
Sbjct: 369 QKMGIKPNVITFTTVLTACSYTGLVEEGKLIFYNMERDYNLKPTIEHYGCVVDLLSRAGL 428
Query: 123 LDDSVKTFLECEY-SDVVLWSSMIAAYGFHGK---GEE 156
LD++ + E + V+W +++ A H GEE
Sbjct: 429 LDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEE 466
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 77/197 (39%), Gaps = 44/197 (22%)
Query: 92 QQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLE--------CEYSDVVLWSS 143
+QIHA ++K G D I+ +S C+ + FL + D LW+
Sbjct: 60 KQIHARMLKTGLIQDSYAITKFLSC-----CISSTSSDFLPYAQIVFDGFDRPDTFLWNL 114
Query: 144 MIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS-----------HCGLKEKG 192
MI + + E ++ L+++M N TF SLL ACS H + + G
Sbjct: 115 MIRGFSCSDEPERSLLLYQRMLCCSAPHNAYTFPSLLKACSNLSALEETTQIHAQITKLG 174
Query: 193 ME-----------------FFDLMVKKYRR--KPRLEHYTCVVDLLGRCGYLDEAAALIR 233
E F L + R KP + V+ + G +D A L R
Sbjct: 175 YENDVYAVNSLINSYAATGNFKLAHLLFDRIPKPDAVSWNSVIKGYAKAGKMDIALTLFR 234
Query: 234 NMPVKANAIIWKTLLSA 250
M V+ NAI W T++S
Sbjct: 235 KM-VEKNAISWTTMISG 250
>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
Length = 869
Score = 314 bits (805), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 162/460 (35%), Positives = 252/460 (54%), Gaps = 44/460 (9%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVG-- 67
++L +Y + G + + + R+V++W TLI G G D M+ G
Sbjct: 415 NALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGHIHDAFQLVREMQQQGRF 474
Query: 68 ----------------FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVIS 111
P+ +T ++++ C+ LA +G++IH ++ D+ V S
Sbjct: 475 TDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKEIHGYAMRHALDSDIAVGS 534
Query: 112 SLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM-EQKEFE 170
+L+ MY++CGCL S F +V+ W+ +I AYG HG G+EAI LF++M E +
Sbjct: 535 ALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMAYGMHGLGDEAIALFDRMVMSNEAK 594
Query: 171 ANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAA 230
N+VTF++ L ACSH G+ ++GME F M + + +P + + C VD+LGR G LDEA +
Sbjct: 595 PNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQPTPDLHACAVDILGRAGRLDEAYS 654
Query: 231 LIRNM-PVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAK 289
+I +M P + W + L AC+ H++ + AE + + P +A+ YVLL NI+++A
Sbjct: 655 IITSMEPGEQQVSAWSSFLGACRLHRNVPLGEIAAERLFQLEPDEASHYVLLCNIYSAAG 714
Query: 290 RWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMK 349
W+ SE R MR+R V KEPG SW+E+ +H+F G+ +HP S + +++ L M+
Sbjct: 715 LWEKSSEVRNRMRQRGVSKEPGCSWIELDGVIHRFMAGESAHPESTLVHAHMDALWERMR 774
Query: 350 LRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP------------- 396
+GY PDT + +HD++ EK L++HSEKLAIAF GL+ P
Sbjct: 775 NQGYTPDTSSVLHDIEESEKAAILRYHSEKLAIAF-----GLLRTPPGATIRVAKNLRVC 829
Query: 397 ------FKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
K+IS + REI++RD RFHHF +G CSCGDYW
Sbjct: 830 NDCHEAAKFISRMVGREIVLRDVRRFHHFVDGACSCGDYW 869
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 137/326 (42%), Gaps = 26/326 (7%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPI--RNVIAWITLIAGKAQNGLAEDVLDQYNLMRM- 65
S+L MY + +V ++P R + W ++ G AQ G+ E+ L+ + M
Sbjct: 310 ASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGMDEEALELFARMEAE 369
Query: 66 VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD 125
G P + T V+ +C+ T + +H V+K G + + V ++L+ +Y+R G ++
Sbjct: 370 AGVVPSETTIAGVLPACARSETFAGKEAVHGYVLKRGMADNPFVQNALMDLYARLGDMEA 429
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQK------------------ 167
+ F E DVV W+++I G +A L +M+Q+
Sbjct: 430 ARWIFAAIEPRDVVSWNTLITGCVVQGHIHDAFQLVREMQQQGRFTDATTEDGIAGTDEE 489
Query: 168 EFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDE 227
N+VT ++LL C+ KG E + ++ + + +VD+ +CG L
Sbjct: 490 PVVPNNVTLMTLLPGCAMLAAPAKGKEIHGYAM-RHALDSDIAVGSALVDMYAKCGCLAL 548
Query: 228 AAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVN---PQDAAPYVLLSNI 284
+ A+ +P K N I W L+ A H D A + + ++ N P + L+
Sbjct: 549 SRAVFDRLP-KRNVITWNVLIMAYGMHGLGDEAIALFDRMVMSNEAKPNEVTFIAALAAC 607
Query: 285 HASAKRWQGVSEFREAMRERNVKKEP 310
S +G+ F R V+ P
Sbjct: 608 SHSGMVDRGMELFHSMKRNHGVQPTP 633
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 110/225 (48%), Gaps = 10/225 (4%)
Query: 33 PIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQ 92
P V+ W T+++ Q+G + ++ M G RPD ITF S + +CS+L L G+
Sbjct: 232 PGGGVVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGR 291
Query: 93 QIHAEVVK-AGASLDVGVISSLISMYS---RCGCLDDSVKTFLECEYSDVVLWSSMIAAY 148
++HA V+K + + + V S+L+ MY+ R G + V + + + LW++M+ Y
Sbjct: 292 EMHAYVLKDSDLAANSFVASALVDMYASHERVG-VARRVFDMVPGGHRQLGLWNAMVCGY 350
Query: 149 GFHGKGEEAINLFEQME-QKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKK-YRRK 206
G EEA+ LF +ME + ++ T +L AC+ ++K+
Sbjct: 351 AQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETFAGKEAVHGYVLKRGMADN 410
Query: 207 PRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSAC 251
P +++ ++DL R G + EAA I + + W TL++ C
Sbjct: 411 PFVQN--ALMDLYARLGDM-EAARWIFAAIEPRDVVSWNTLITGC 452
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 11/205 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ GS+L MY K G L V +P RNVI W LI +GL ++ + ++ M
Sbjct: 529 DIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMAYGMHGLGDEAIALFDRMV 588
Query: 65 MVG-FRPDKITFVSVISSCSELATLGQGQQI-HAEVVKAGASLDVGVISSLISMYSRCGC 122
M +P+++TF++ +++CS + +G ++ H+ G + + + + R G
Sbjct: 589 MSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQPTPDLHACAVDILGRAGR 648
Query: 123 LDD--SVKTFLECEYSDVVLWSSMIAAYGFHGK---GEEAINLFEQMEQKEFEANDVTFV 177
LD+ S+ T +E V WSS + A H GE A Q+E E +V
Sbjct: 649 LDEAYSIITSMEPGEQQVSAWSSFLGACRLHRNVPLGEIAAERLFQLEPDEAS----HYV 704
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKK 202
L S GL EK E + M ++
Sbjct: 705 LLCNIYSAAGLWEKSSEVRNRMRQR 729
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 93/202 (46%), Gaps = 10/202 (4%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
++L Y + G L + MP R+ + + +LIA LD M + G
Sbjct: 99 ANALLTAYARCGDLTAALALFNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGH 158
Query: 69 RPDKITFVSVISSCSELA-TLGQGQQIHAEVVKAGASLDVG---VISSLISMYSRCGCLD 124
T VSV+ +CS LA L G++ HA +K G LD ++L+SMY+R G +D
Sbjct: 159 PLSSFTLVSVLLACSHLAEDLRLGREAHAFALKNG-FLDGDERFAFNALLSMYARLGLVD 217
Query: 125 DSVKTFLECEYSD-----VVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
D+ F + +D VV W++M++ G+ EAI + M + + +TF S
Sbjct: 218 DAQMLFGSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASA 277
Query: 180 LYACSHCGLKEKGMEFFDLMVK 201
L ACS + G E ++K
Sbjct: 278 LPACSQLEMLSLGREMHAYVLK 299
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 76/187 (40%), Gaps = 8/187 (4%)
Query: 71 DKITFVSVISSCSELATLGQGQQIHAEVVKAGA--SLDVGVISSLISMYSRCGCLDDSVK 128
D S + L +L + IH ++ V ++L++ Y+RCG L ++
Sbjct: 58 DHFALPPAAKSAAALRSLIAVRSIHGAALRRDLLHGFTPAVANALLTAYARCGDLTAALA 117
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F D V ++S+IAA + A++ M + + T VS+L ACSH
Sbjct: 118 LFNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHLAE 177
Query: 189 KEK-GMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK----ANAI 242
+ G E +K + + ++ + R G +D+A L ++ +
Sbjct: 178 DLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGVV 237
Query: 243 IWKTLLS 249
W T++S
Sbjct: 238 TWNTMVS 244
>gi|387169573|gb|AFJ66232.1| hypothetical protein 34G24.32 [Capsella rubella]
Length = 598
Score = 314 bits (805), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 160/429 (37%), Positives = 257/429 (59%), Gaps = 18/429 (4%)
Query: 17 MKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY-NLMRMVGFRPDKITF 75
MK+G +KV+R +NVI W +I G +N E+ L N++ +P+K +F
Sbjct: 173 MKTGEYGLAKKVLRRASDQNVITWNLMIGGYVRNVQYEEALKTLKNMLSFSDIKPNKFSF 232
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
S +++C+ L L + +H+ ++ AG L+ + S+L+ +Y++CG ++ S + F ++
Sbjct: 233 ASALAACARLGDLHHAKWVHSLMIDAGIELNTILSSALVDVYAKCGDIETSREVFYSVKW 292
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
+DV +W++MI + HG EAI +F +ME + + +TF+ +L ACSHCGL E+G EF
Sbjct: 293 NDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGILTACSHCGLLEEGKEF 352
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK 255
F LM +++ +P+LEHY +VDLLGR G + EA LI +MP++ + +IW++LLS+ +T+K
Sbjct: 353 FGLMSQRFSIQPKLEHYGAMVDLLGRAGQVKEAYDLIESMPIEPDVVIWRSLLSSARTYK 412
Query: 256 STDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWL 315
+ ++ G IA I ++ + YVLLSNI++S K+W+ + RE M + ++K G SW+
Sbjct: 413 NPEL-GEIA--IQNLSKAKSGDYVLLSNIYSSTKKWENAQKVRELMTKEGIRKAKGKSWV 469
Query: 316 EIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKH 375
E +H+F GD SH + I LE L + K G+V DT + D+ EEKE NL +
Sbjct: 470 EFGGVIHRFKAGDTSHIDTKAIYKVLEGLIQKAKSEGFVSDTDLVLMDVSEEEKEENLNY 529
Query: 376 HSEKLAIAFA--EHTRGLIVMLP------------FKYISEIKNREIIVRDASRFHHFRN 421
HSEKLA+A+ + + G + + K +S++ NR II+RD RFH F +
Sbjct: 530 HSEKLALAYVILKSSPGSEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDRIRFHRFED 589
Query: 422 GKCSCGDYW 430
G CSC DYW
Sbjct: 590 GLCSCKDYW 598
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 98/214 (45%), Gaps = 14/214 (6%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G EL+ + S+L +Y K G + +V + +V W +I G A +GLA + + +
Sbjct: 259 GIELNTILSSALVDVYAKCGDIETSREVFYSVKWNDVSIWNAMITGFATHGLATEAIRVF 318
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV--ISSLISMYS 118
+ M PD ITF+ ++++CS L +G++ ++ S+ + +++ +
Sbjct: 319 SEMEAEHVSPDSITFLGILTACSHCGLLEEGKEFFG-LMSQRFSIQPKLEHYGAMVDLLG 377
Query: 119 RCGCLDDSVKTFLECEY-SDVVLWSSMIAA---YGFHGKGEEAINLFEQMEQKEFEANDV 174
R G + ++ DVV+W S++++ Y GE AI + ++ D
Sbjct: 378 RAGQVKEAYDLIESMPIEPDVVIWRSLLSSARTYKNPELGEIAIQNLSKA-----KSGDY 432
Query: 175 TFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPR 208
+S +Y+ + E + +LM K+ RK +
Sbjct: 433 VLLSNIYSSTKKW--ENAQKVRELMTKEGIRKAK 464
>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
Length = 814
Score = 314 bits (805), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 151/360 (41%), Positives = 230/360 (63%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
LD G +L MY K G + + EK+ + + V++W +I+G + +E+ ++ M
Sbjct: 447 LDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKM 506
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
+G PD T+ +++ +C+ L T+ G+QIHA+++K D + S+L+ MYS+CG +
Sbjct: 507 LEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNM 566
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
D F + D V W++M+ Y HG GEEA+ +FE M+ + + N TF+++L AC
Sbjct: 567 QDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRAC 626
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
H GL EKG+ +F M+ Y P+LEHY+CVVD++GR G + +A LI MP +A+A+I
Sbjct: 627 GHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVI 686
Query: 244 WKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
W+TLLS CK H + ++A + A IL + P+D+A YVLLSNI+A+A W V++ R+ MR
Sbjct: 687 WRTLLSXCKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRF 746
Query: 304 RNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHD 363
+KKEPG SW+EIK++VH F +GDK+HPRS EI L+ LT EMK GY+PDT ++D
Sbjct: 747 NGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENLDVLTDEMKWVGYMPDTDFILND 806
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 134/279 (48%), Gaps = 4/279 (1%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
++ +++ MY K G+LVE V M R+ ++W +IA QNG E L + M
Sbjct: 347 NICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWML 406
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G PD+ T+ SV+ +C+ L G +IH ++K+ LD V +LI MYS+CG ++
Sbjct: 407 QSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSKCGMME 466
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ K VV W+++I+ + + EEA F +M + + ++ T+ ++L C+
Sbjct: 467 KAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCA 526
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
+ E G + ++KK + T +VD+ +CG + + + P + + + W
Sbjct: 527 NLVTVELGKQIHAQIIKKELQSDAYISST-LVDMYSKCGNMQDFQLIFEKAPNR-DFVTW 584
Query: 245 KTLLSACKTHKSTDMAGRIAE--EILGVNPQDAAPYVLL 281
++ H + A +I E ++ V P A +L
Sbjct: 585 NAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVL 623
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 142/278 (51%), Gaps = 9/278 (3%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVE-GEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
F D+V G++ MYMK +L + ++ +P N+ ++ +I G A++ + L +
Sbjct: 242 FGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMF 301
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
L++ G D+++ +C+ + +G Q+H +K+ ++ V ++++ MY +C
Sbjct: 302 RLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKC 361
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L ++ F E D V W+++IAA+ +G E+ ++LF M Q E ++ T+ S+L
Sbjct: 362 GALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVL 421
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYT--CVVDLLGRCGYLDEAAALIRNMPVK 238
AC+ GME + ++K + L+ + ++D+ +CG +++A L + +
Sbjct: 422 KACAGWQALNCGMEIHNRIIKS---RMGLDSFVGIALIDMYSKCGMMEKAEKL-HDRLAE 477
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQD 274
+ W ++S K ++ A + ++L GV+P +
Sbjct: 478 QTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDN 515
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 128/319 (40%), Gaps = 73/319 (22%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLI---AGKAQNGLAEDVLD 58
F+ + + L MY+K L KV MP R+ ++W ++ AG+ G+A+ + D
Sbjct: 73 FKPTVFVTNCLIQMYIKCSDLGFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFD 132
Query: 59 -------------QYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASL 105
+ + RM G D+ TF V+ SCS L G G QIH VK G
Sbjct: 133 AMPGTGCGVVELFDFRMGRM-GTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDC 191
Query: 106 DVGVISSLISMYSRCGCLDDSVKTFLECEY----------------------SDVVLWSS 143
DV S+L+ MY++C +D ++ LE +DVV+ ++
Sbjct: 192 DVVTGSALLDMYAKCCVQNDDLRGGLELFKEMQKAGVGALQLHGHALKTDFGTDVVIGTA 251
Query: 144 --------------------------------MIAAYGFHGKGEEAINLFEQMEQKEFEA 171
+I Y KG EA+ +F +++
Sbjct: 252 TLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGL 311
Query: 172 NDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAAL 231
++V+ AC+ +G++ L +K + + ++D+ G+CG L EA +
Sbjct: 312 DEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQS-NICVANAILDMYGKCGALVEACLV 370
Query: 232 IRNMPVKANAIIWKTLLSA 250
M V +A+ W +++A
Sbjct: 371 FEEM-VSRDAVSWNAIIAA 388
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 72 KITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFL 131
K TF + CS+ L G+Q HA ++ V V + LI MY +C L + K F
Sbjct: 42 KKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFD 101
Query: 132 ECEYSDVVLWSSMIAAYGFHGKGEEAI--NLFEQM 164
D V W++M+ +G+ G+G+ + LF+ M
Sbjct: 102 GMPQRDTVSWNAML--FGYAGRGDIGVAQKLFDAM 134
>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 725
Score = 314 bits (805), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 163/446 (36%), Positives = 259/446 (58%), Gaps = 20/446 (4%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
+L +++ Y K+G L + + +++++ W T+I+ A++ ++ L + M
Sbjct: 280 NLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEALRVFEEMC 339
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G +PD +T +SVIS+C L TL + + +H G + + ++LI+MY++CG LD
Sbjct: 340 CSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYTHLNGLESVLPIDNALINMYAKCGGLD 399
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ F + +VV WSSMI A+ HG+ ++++LF QM+Q+ E N+VTFV +LY CS
Sbjct: 400 AARDVFEKMPTRNVVSWSSMINAFAMHGEASDSLSLFAQMKQENVEPNEVTFVGVLYGCS 459
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL E+G + F M +Y P++EHY C+VDL GR L EA +I +MP+ N +IW
Sbjct: 460 HSGLVEEGKKIFASMTDEYNITPKIEHYGCMVDLFGRANLLREALEVIESMPMAPNVVIW 519
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
+L+SAC+ H ++ A+ IL + P VL+SNI+A RW V R M ++
Sbjct: 520 GSLMSACRVHGELELGELAAKRILKLEPDHDGALVLMSNIYAREYRWDYVRIIRWIMEKK 579
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
V KE G+S +++ + H+F +GDK H +S EI L E+ S++KL GYVPD G+ + D+
Sbjct: 580 KVFKEKGLSRIDLNGKSHEFLIGDKRHKQSNEIYTKLYEVVSKLKLAGYVPDGGSVLVDV 639
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTR---------GLIVMLP-----------FKYISEIK 404
+ EEK+ + HSEKLA+ F + G+I ++ FK +S++
Sbjct: 640 EEEEKKDLVLWHSEKLALCFGLMNKEKEEEKGSCGVIRIVKNLRVCEDCHAFFKLVSKVY 699
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
EIIVRD +RFH +++G CSC DYW
Sbjct: 700 ELEIIVRDRTRFHRYKDGLCSCRDYW 725
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 125/285 (43%), Gaps = 41/285 (14%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D + L MY G + V M R+V+ W T+I + GL ++ + M+
Sbjct: 148 DPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNTMIERYCRFGLLDEAFKLFEEMK 207
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC-- 122
PD++ +++S+C + + I+ +++ +D ++++L++MY+ GC
Sbjct: 208 DSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDTHLLTALVTMYAGAGCMD 267
Query: 123 -----------------------------LDDSVKTFLECEYSDVVLWSSMIAAYGFHGK 153
LDD+ F + E D+V W++MI+AY
Sbjct: 268 MAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLVCWTTMISAYAESDH 327
Query: 154 GEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY- 212
+EA+ +FE+M + + VT +S++ AC + G +K V +Y LE
Sbjct: 328 PQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAK-----WVHRYTHLNGLESVL 382
Query: 213 ---TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
++++ +CG LD A + MP + N + W ++++A H
Sbjct: 383 PIDNALINMYAKCGGLDAARDVFEKMPTR-NVVSWSSMINAFAMH 426
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 98/206 (47%), Gaps = 1/206 (0%)
Query: 33 PIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQ 92
P+ I + +L+ +++G + Y +R VG R D+I+F ++ + S+++ L +G
Sbjct: 75 PLPESIVFNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVSKVSALFEGM 134
Query: 93 QIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHG 152
++H K D V + L+ MY+ CG ++ + F E DVV W++MI Y G
Sbjct: 135 ELHGFAFKIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNTMIERYCRFG 194
Query: 153 KGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY 212
+EA LFE+M+ +++ +++ AC G +D +++ R
Sbjct: 195 LLDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDT-HLL 253
Query: 213 TCVVDLLGRCGYLDEAAALIRNMPVK 238
T +V + G +D A R M V+
Sbjct: 254 TALVTMYAGAGCMDMAMEFFRKMSVR 279
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 123/277 (44%), Gaps = 32/277 (11%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E L ++L +MY K G L V MP RNV++W ++I A +G A D L +
Sbjct: 377 GLESVLPIDNALINMYAKCGGLDAARDVFEKMPTRNVVSWSSMINAFAMHGEASDSLSLF 436
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVV-KAGASLDVGVISSLISMYSR 119
M+ P+++TFV V+ CS + +G++I A + + + + ++ ++ R
Sbjct: 437 AQMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKIEHYGCMVDLFGR 496
Query: 120 CGCLDDSVKTFLECEYS-DVVLWSSMIAAYGFHGKGE-----------------EAINLF 161
L ++++ + +VV+W S+++A HG+ E A+ L
Sbjct: 497 ANLLREALEVIESMPMAPNVVIWGSLMSACRVHGELELGELAAKRILKLEPDHDGALVLM 556
Query: 162 EQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDL-------MVKKYRRKPRLEHYTC 214
+ +E+ + V + + KEKG+ DL ++ R K E YT
Sbjct: 557 SNIYAREYRWDYVRIIRWIMEKKKV-FKEKGLSRIDLNGKSHEFLIGDKRHKQSNEIYTK 615
Query: 215 ---VVDLLGRCGYLDEAAALIRNM--PVKANAIIWKT 246
VV L GY+ + +++ ++ K + ++W +
Sbjct: 616 LYEVVSKLKLAGYVPDGGSVLVDVEEEEKKDLVLWHS 652
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 314 bits (804), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 169/451 (37%), Positives = 258/451 (57%), Gaps = 26/451 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF +L ++L +Y K G L + +P ++VI+W TLI G L ++ L +
Sbjct: 296 GFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLF 355
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVK--AGASLDVGVISSLISMYS 118
M G P+ +T +S++ +C+ L + G+ IH + K G + + +SLI MY+
Sbjct: 356 QEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYA 415
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+CG ++ + + F + + W++MI + HG+ + + +LF +M + + +D+TFV
Sbjct: 416 KCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVG 475
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
LL ACSH G+ + G F M + Y+ P+LEHY C++DLLG G EA +I M ++
Sbjct: 476 LLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEME 535
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
+ +IW +LL ACK H + ++ AE ++ + P++ YVLLSNI+ASA RW V++ R
Sbjct: 536 PDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTR 595
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
+ ++ +KK PG S +EI + VH+F +GDK HPR+ EI LEE+ ++ G+VPDT
Sbjct: 596 ALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTS 655
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKY 399
+ +M+ E KE L+HHSEKLAIAF GLI P K
Sbjct: 656 EVLQEMEEEWKEGALRHHSEKLAIAF-----GLISTKPGTKLTIVKNLRVCRNCHEATKL 710
Query: 400 ISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
IS+I REII RD +RFHHFR+G CSC DYW
Sbjct: 711 ISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 154/304 (50%), Gaps = 8/304 (2%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+V+ ++L Y G + +K+ +P+++V++W +I+G A+ G ++ L+ + M
Sbjct: 199 DVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMM 258
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
RPD+ T V+V+S+C++ ++ G+Q+H + G ++ ++++LI +YS+CG L+
Sbjct: 259 KTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELE 318
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ F Y DV+ W+++I Y +EA+ LF++M + NDVT +S+L AC+
Sbjct: 319 TACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACA 378
Query: 185 HCGLKEKGM---EFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
H G + G + D +K L T ++D+ +CG + EAA + N + +
Sbjct: 379 HLGAIDIGRWIHVYIDKRLKGVTNASSLR--TSLIDMYAKCGDI-EAAHQVFNSILHKSL 435
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
W ++ H D + + + +G+ P D LLS S G FR
Sbjct: 436 SSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRT 495
Query: 300 AMRE 303
++
Sbjct: 496 MTQD 499
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 122/274 (44%), Gaps = 35/274 (12%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
N++ W T+ G A + L Y M +G P+ TF V+ SC++ +GQQIH
Sbjct: 98 NLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIH 157
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT-------------------------- 129
V+K G LD+ V +SLISMY + G L+D+ K
Sbjct: 158 GHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIE 217
Query: 130 -----FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
F E DVV W++MI+ Y G +EA+ LF+ M + ++ T V+++ AC+
Sbjct: 218 NAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACA 277
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
G E G + L + + L+ ++DL +CG L+ A L +P K + I W
Sbjct: 278 QSGSIELGRQ-VHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK-DVISW 335
Query: 245 KTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAA 276
TL+ A + +E+L G P D
Sbjct: 336 NTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVT 369
>gi|115485519|ref|NP_001067903.1| Os11g0482400 [Oryza sativa Japonica Group]
gi|77550880|gb|ABA93677.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|113645125|dbj|BAF28266.1| Os11g0482400 [Oryza sativa Japonica Group]
Length = 770
Score = 314 bits (804), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 164/461 (35%), Positives = 268/461 (58%), Gaps = 37/461 (8%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQ--NGLAEDV-- 56
G E +L +S ++Y++ G E ++ M ++I W +I+G AQ + +D+
Sbjct: 311 GCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQA 370
Query: 57 -------LDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV 109
L + ++ +PD TF S++S CS + L QG+QIHA+ +K+G DV V
Sbjct: 371 RSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVV 430
Query: 110 ISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEF 169
S+L++MY++CGC+ D+ K FLE V W+SMI+ Y HG+ +EAI LFE+M
Sbjct: 431 NSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGV 490
Query: 170 EANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAA 229
N++TFVSLL ACS+ GL E+ +FD+M K+Y +P ++HY C++D+ R G +++A
Sbjct: 491 RPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAF 550
Query: 230 ALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAK 289
+ I+ + N IW +L++ C++H + ++A A+++L + P+ Y+LL N++ S +
Sbjct: 551 SFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYISTE 610
Query: 290 RWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMK 349
RWQ V+ R+ M++ +V SW+ IK++V+ F D++HP++ E+ LE L + K
Sbjct: 611 RWQDVARVRKLMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQATELYQLLENLLEKAK 670
Query: 350 LRGYVPDTGADMHDMDSEEKEY--NLKHHSEKLAIAFAEHTRGLIVMLP----------- 396
GY P A++ D + +EK +LKHHSE+LA+A GL+ P
Sbjct: 671 AIGYEPYQNAELSDSEDDEKPAAGSLKHHSERLAVAL-----GLLQTPPGATVRVTKNIT 725
Query: 397 --------FKYISEIKNREIIVRDASRFHHFRNGKCSCGDY 429
K S ++NREIIVRD+ R H F++G+CSCGD+
Sbjct: 726 MCRDCHSSIKLFSLLENREIIVRDSKRLHKFKDGRCSCGDF 766
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 137/288 (47%), Gaps = 16/288 (5%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNG-LAEDVLDQYNLMRMVG 67
G+SL +Y K GSL + +P +NVI W T+I+ A++ E + + M M G
Sbjct: 217 GNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGMSLFIDMLMDG 276
Query: 68 FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV 127
P++ T SV+S C L G+Q+ A K G ++ V +S + +Y R G D+++
Sbjct: 277 VMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAM 336
Query: 128 KTFLECEYSDVVLWSSMIAAYG-----------FHGKGEEAINLFEQMEQKEFEANDVTF 176
+ F + E + ++ W++MI+ Y +G +A+ +F +++ + + TF
Sbjct: 337 RLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTF 396
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
S+L CS E+G + +K + + + +V++ +CG + +A MP
Sbjct: 397 SSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVN-SALVNMYNKCGCIQDANKAFLEMP 455
Query: 237 VKANAIIWKTLLSACKTHKSTDMAGRIAEE--ILGVNPQDAAPYVLLS 282
+ + W +++S H A ++ EE + GV P + LLS
Sbjct: 456 TR-TFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLS 502
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 117/256 (45%), Gaps = 13/256 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D+ +SL + YM+ + + ++ MP RNV+ W L+ G N L+ +
Sbjct: 108 GASADMFVATSLVNAYMRCSAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVF 167
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M +G P T + +++C + G+Q+H +K GA + +SL S+Y++
Sbjct: 168 VEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKL 227
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEE-AINLFEQMEQKEFEANDVTFVSL 179
G LD +++ F +V+ W++MI+A + E ++LF M N+ T S+
Sbjct: 228 GSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSV 287
Query: 180 LYACSHCGLK-----EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRN 234
+ S CG + K ++ F + P +++ T + L R G DEA L
Sbjct: 288 M---SLCGTRLDLNLGKQVQAFSFKIGCETNLP-VKNSTMYLYL--RKGETDEAMRLFEQ 341
Query: 235 MPVKANAIIWKTLLSA 250
M A+ I W ++S
Sbjct: 342 ME-DASIITWNAMISG 356
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 81/177 (45%), Gaps = 2/177 (1%)
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
+V ++ C E +LG + +H + K GAS D+ V +SL++ Y RC D+ + F
Sbjct: 81 YVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSAARDARRLFDGMP 140
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGME 194
+VV W++++ Y + + + +F +M + + T + L AC + G +
Sbjct: 141 ERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQ 200
Query: 195 FFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSAC 251
+ KY + + L + G LD A +P K N I W T++SAC
Sbjct: 201 VHGYAI-KYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEK-NVITWTTMISAC 255
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 314 bits (804), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 167/451 (37%), Positives = 259/451 (57%), Gaps = 26/451 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF +L ++L +Y K G L + + + ++VI+W TLI G L ++ L +
Sbjct: 265 GFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLF 324
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVK--AGASLDVGVISSLISMYS 118
M G +P+ +T +S++S+C+ L + G+ IH + K G + + +SLI MY+
Sbjct: 325 QDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYA 384
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+CG ++ + + F + W++MI + HG+ A ++F +M + E +D+TFV
Sbjct: 385 KCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVG 444
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
LL ACSH G+ + G F M + Y+ P+LEHY C++DL G G EA +I M ++
Sbjct: 445 LLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEME 504
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
+ +IW +LL ACK H + ++ A+ ++ + P++ YVLLSNI+A+A+RW V++ R
Sbjct: 505 PDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPENPGSYVLLSNIYATAERWNEVAKTR 564
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
+ ++ +KK PG S +EI + VH+F +GDK HPR+ EI LEE+ ++ G+VPDT
Sbjct: 565 ALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTS 624
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKY 399
+ +M+ E KE L+HHSEKLAIAF GLI P K
Sbjct: 625 EVLQEMEEEWKEGALRHHSEKLAIAF-----GLISTKPGTKLTIVKNLRVCRNCHEATKL 679
Query: 400 ISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
IS+I REII RD +RFHHFR+G+CSC DYW
Sbjct: 680 ISKIYKREIIARDRTRFHHFRDGECSCNDYW 710
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 151/304 (49%), Gaps = 8/304 (2%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+V+ ++L Y G + K+ +P+++V++W I+G A+ G ++ L+ + M
Sbjct: 168 DVVSYTALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMM 227
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
RPD+ T V+V+S+C++ ++ G+Q+H+ + G ++ ++++LI +YS+CG L+
Sbjct: 228 KTNVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELE 287
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ F DV+ W+++I Y +EA+ LF+ M + + NDVT +S+L AC+
Sbjct: 288 TACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACA 347
Query: 185 HCGLKEKGM---EFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
H G + G + D +K L T ++D+ +CG ++ A + +M + +
Sbjct: 348 HLGAIDIGRWIHVYIDKRLKGVTNASSLR--TSLIDMYAKCGDIEAAQQVFDSM-LNRSL 404
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
W ++ H + A I + G+ P D LLS S G FR
Sbjct: 405 SSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRS 464
Query: 300 AMRE 303
R+
Sbjct: 465 MTRD 468
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 124/279 (44%), Gaps = 35/279 (12%)
Query: 37 VIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHA 96
++ W T+ G A + L Y M +G P+ TF ++ SC++ +GQQ+H
Sbjct: 68 LLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQLHG 127
Query: 97 EVVKAGASLDVGVISSLISMYSRCGCLDDSVKT--------------------------- 129
+V+K G LD+ + +SLISMY + G L+D+ K
Sbjct: 128 QVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIES 187
Query: 130 ----FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
F E DVV W++ I+ Y G +EA+ LF++M + ++ T V++L AC+
Sbjct: 188 AHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQ 247
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
G E G + + + L+ ++DL +CG L+ A L + + K + I W
Sbjct: 248 SGSIELGRQVHS-WINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNK-DVISWN 305
Query: 246 TLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLS 282
TL+ A + +++L G P D +LS
Sbjct: 306 TLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILS 344
>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Brachypodium distachyon]
Length = 661
Score = 314 bits (804), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 162/414 (39%), Positives = 236/414 (57%), Gaps = 24/414 (5%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
NV++W +++A QNG + +D + M+ +G P+ +T V+ + + +A L G+ H
Sbjct: 253 NVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANVAALMHGRSAH 312
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGE 155
++ G DV V S+L+ MY++CG + F +VV W++MI Y HG
Sbjct: 313 CFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRNVVSWNAMIGGYAMHGDAA 372
Query: 156 EAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV 215
A+ LF M++ + + + VTF +L ACS GL E+G +F+ M + + PR+EHY C+
Sbjct: 373 NAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRRYFNEMQQGHGISPRMEHYACM 432
Query: 216 VDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDA 275
V LLGR G LDEA LI MP + ++ IW +LL +C+ + + +A AE++ + P +A
Sbjct: 433 VTLLGRSGKLDEAYDLINEMPFEPDSCIWGSLLGSCRVYGNVLLAEVAAEKLFQLEPGNA 492
Query: 276 APYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSM 335
YVLLSNI+AS K W GV+ R+ M+ +KKE G SW+EIKN+VH GD SHP
Sbjct: 493 GNYVLLSNIYASKKMWDGVNRVRDEMKNMGLKKEKGCSWIEIKNKVHMLLAGDNSHPMMT 552
Query: 336 EIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVML 395
I L +LT EM G+ P +HD++ +EK+ L HSEKLA+A GLI
Sbjct: 553 AITEKLNQLTIEMNRLGFAPSRDFVLHDVEEQEKDNILAVHSEKLAVAL-----GLISTR 607
Query: 396 P-------------------FKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
P K+IS + REI VRD +RFHHF++GKCSCGDYW
Sbjct: 608 PGTPLRVIKNLRICGDCHEAMKFISSFEQREISVRDTNRFHHFKDGKCSCGDYW 661
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 128/325 (39%), Gaps = 74/325 (22%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D SSL H Y++ G+ V MP +NV+ W LIAG + G AE
Sbjct: 47 GLAEDPFVASSLLHSYIRLGATGAARSVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLL 106
Query: 61 NLMRMVGFRPDKITFVSVIS------------------------------SCSELATLGQ 90
MR G P+ IT+ ++S SC+ L+ +G
Sbjct: 107 EQMRSAGVEPNVITWNGLVSGLNRSGRALDAVTALVRMHSEGFFPDATGVSCA-LSAVGD 165
Query: 91 ------GQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSM 144
G+Q+H VVKAG LD V+++LI MY +CG D+ V+ F E + DV +++
Sbjct: 166 VKEVSVGKQVHGYVVKAGCRLDACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNAL 225
Query: 145 IAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYR 204
+A + + EA+ LF + + E N V++ S++ C G + ++ F M +
Sbjct: 226 VAGLSRNAQVSEALLLFREFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTM-QSIG 284
Query: 205 RKPRLEHYTCV-----------------------------------VDLLGRCGYLDEAA 229
+P CV VD+ +CG A
Sbjct: 285 VEPNSVTIPCVLPAFANVAALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHAR 344
Query: 230 ALIRNMPVKANAIIWKTLLSACKTH 254
+ MP + N + W ++ H
Sbjct: 345 TIFDAMPSR-NVVSWNAMIGGYAMH 368
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 91/189 (48%), Gaps = 11/189 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D+ GS+L MY K G + MP RNV++W +I G A +G A + + +
Sbjct: 319 GFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRNVVSWNAMIGGYAMHGDAANAVQLF 378
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSR 119
M+ +PD +TF V+ +CS+ +G++ E+ + G S + + ++++ R
Sbjct: 379 CSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRRYFNEMQQGHGISPRMEHYACMVTLLGR 438
Query: 120 CGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFE-----AND 173
G LD++ E + D +W S++ + +G + L E +K F+ A +
Sbjct: 439 SGKLDEAYDLINEMPFEPDSCIWGSLLGSCRVYGN----VLLAEVAAEKLFQLEPGNAGN 494
Query: 174 VTFVSLLYA 182
+S +YA
Sbjct: 495 YVLLSNIYA 503
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 111/270 (41%), Gaps = 29/270 (10%)
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
Y+ +R V F PD S + SC + +HA V +G + D V SSL+ Y R
Sbjct: 8 YHFLRHVSFPPDPHLLPSALKSCPAQPL---ARALHAAAVVSGLAEDPFVASSLLHSYIR 64
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G + F +VV WS++IA Y G E A L EQM E N +T+ L
Sbjct: 65 LGATGAARSVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNGL 124
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRK--PRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
+ + G + ++ +V+ + P +C + +G + + V
Sbjct: 125 VSGLNRSG---RALDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEV-SVGKQVHGYVV 180
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRI--AEEILGVNPQD-----AAPYVLLSNIHASAKR 290
KA L AC DM G+ A+EI+ V + A+ L++ + +A+
Sbjct: 181 KAG-----CRLDACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQV 235
Query: 291 WQGVSEFREAM---RERNVKKEPGVSWLEI 317
+ + FRE + E NV VSW I
Sbjct: 236 SEALLLFREFICRGVELNV-----VSWTSI 260
>gi|302771271|ref|XP_002969054.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
gi|300163559|gb|EFJ30170.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
Length = 696
Score = 314 bits (804), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 175/458 (38%), Positives = 260/458 (56%), Gaps = 32/458 (6%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ ++V ++L MY K GS VE KV M RNVI+W ++IA AQ+G ++ L
Sbjct: 243 GFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEAL--- 299
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
NL + + P ++F S +++C+ L L +G++IH VV+A + + +SL+SMY+RC
Sbjct: 300 NLFKRMDVEPSGVSFSSALNACALLGALDEGREIHHRVVEAHLA-SPQMETSLLSMYARC 358
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G LDD+ + F + D ++MIAA+ HG+ ++A+ ++ +MEQ+ A+ +TFVS+L
Sbjct: 359 GSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPADGITFVSVL 418
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH L +FF +V + P +EHY C+VD+LGR G L +A L+ MP + +
Sbjct: 419 VACSHTSLVADCRDFFQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQTD 478
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A+ W TLLS CK H + R A ++ + P + PYV LSN++A+AKR+ R+
Sbjct: 479 AVAWMTLLSGCKRHGDLNRGERAARKVFELAPAETLPYVFLSNMYAAAKRFDDARRVRKE 538
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHP------RSME-IDLYLEELTSEMKLRGY 353
M ER V VS++EI N++H FT G + R+ME + L EL MK GY
Sbjct: 539 MEERGVTTPVAVSYIEIDNELHMFTSGGRDEQQEGHDGRTMERVRSLLLELLEPMKQAGY 598
Query: 354 VPDTG----ADMHDMDSEEKEYNLKHHSEKLAIAFA-------EHTRGLIVM-------- 394
VPDT EEK+ +L HSE+LAIA+ + +R L V+
Sbjct: 599 VPDTREVYLEQQGGTSEEEKQRSLCFHSERLAIAYGLIAAKDPDDSRPLRVVNSHRVCSD 658
Query: 395 --LPFKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
K +S+I + I VRD +RFHHF G CSCGD+W
Sbjct: 659 CHSAIKLLSDIIEKTIFVRDGNRFHHFEKGACSCGDHW 696
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 138/260 (53%), Gaps = 7/260 (2%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D V SL +MY+K +VE KV M RNV ++ +I+ Q G + L+ ++ M
Sbjct: 145 DDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMS 204
Query: 65 MV-GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
V P+ TF +++ + L L +G+++H + G +V V ++L++MY +CG
Sbjct: 205 KVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSP 264
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
++ K F +V+ W+SMIAAY HG +EA+NLF++M + E + V+F S L AC
Sbjct: 265 VEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRM---DVEPSGVSFSSALNAC 321
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
+ G ++G E +V+ + P++E T ++ + RCG LD+A + M + +A
Sbjct: 322 ALLGALDEGREIHHRVVEAHLASPQME--TSLLSMYARCGSLDDARRVFNRMKTR-DAFS 378
Query: 244 WKTLLSACKTHKSTDMAGRI 263
+++A H A RI
Sbjct: 379 CNAMIAAFTQHGRKKQALRI 398
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 132/256 (51%), Gaps = 5/256 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D+ ++L MY K GSL + ++V M I+++ AW ++I+ A+ G E + Y
Sbjct: 40 GFRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLY 99
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G P+ +TF + C+ +A L G+ IH ++ + D + SL++MY +C
Sbjct: 100 RRMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKC 159
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE-FEANDVTFVSL 179
+ ++ K F + +V +++MI+AY G+ EA+ LF +M + E E N TF ++
Sbjct: 160 DEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATI 219
Query: 180 LYACSHCGLKEKGMEFF-DLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
L A G EKG + L + + +++ +V + G+CG EA + +M +
Sbjct: 220 LGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQN--ALVTMYGKCGSPVEARKVFDSMTAR 277
Query: 239 ANAIIWKTLLSACKTH 254
N I W ++++A H
Sbjct: 278 -NVISWTSMIAAYAQH 292
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 71/118 (60%)
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
G DK S++++C++L L +G+++H ++ G D+ + ++L+ MY++CG LDD+
Sbjct: 5 GIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDA 64
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ F E D+ WSS+I+AY G+GE A+ L+ +M + E N VTF L C+
Sbjct: 65 KRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCA 122
>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 865
Score = 314 bits (804), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 170/479 (35%), Positives = 262/479 (54%), Gaps = 49/479 (10%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWI------------------- 41
G ++L S+L +Y K S+ E V LMP R+V++W
Sbjct: 295 GMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLF 354
Query: 42 ----------------TLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSEL 85
+I G +NG +E+ ++ + M+ +GF+P++IT S++ +CS
Sbjct: 355 LKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFS 414
Query: 86 ATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMI 145
L G++IH V + D+ ++L+ MY++CG L+ S F DVV W++MI
Sbjct: 415 ENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMI 474
Query: 146 AAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRR 205
A HG G+EA+ LF++M + N VTF +L CSH L E+G++ F+ M + +
Sbjct: 475 IANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLV 534
Query: 206 KPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAE 265
+P HY+CVVD+ R G L+EA I+ MP++ A W LL+AC+ +K+ ++A A+
Sbjct: 535 EPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAK 594
Query: 266 EILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFT 325
++ + P + YV L NI +AK W S+ R M+ER + K PG SWL++ N+VH F
Sbjct: 595 KLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSWLQVGNKVHTFV 654
Query: 326 MGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFA 385
+GDKS+ S +I +L+EL +MK+ GY PDT + D+D EEK +L +HSEKLA+AF
Sbjct: 655 VGDKSNIESDKIYNFLDELVEKMKMAGYKPDTDYVLQDIDQEEKAESLCNHSEKLAVAFG 714
Query: 386 -EHTRGLIVMLPF-------------KYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+ G + F KY+S++ I+VRD+ RFHHF+NG CSC D W
Sbjct: 715 ILNLNGQSTIRVFKNLRICGDCHNAIKYMSKVVGVIIVVRDSLRFHHFKNGNCSCKDLW 773
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 159/346 (45%), Gaps = 39/346 (11%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D+ G++L H Y K + +V + +R+V++W +L + + G +D +
Sbjct: 194 GVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVF 253
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G +P+ +T S++ +C+EL L G++IH V+ G +++ V S+L+S+Y++C
Sbjct: 254 REMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKC 313
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAY--------GF---------------------- 150
+ ++ F + DVV W+ ++ AY GF
Sbjct: 314 LSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVI 373
Query: 151 -----HGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRR 205
+G+ EEA+ +F +M++ F+ N++T S+L ACS G E V ++ +
Sbjct: 374 GGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKE-IHCYVFRHWK 432
Query: 206 KPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAE 265
L T ++ + +CG L+ + + +M + + + W T++ A H + A + +
Sbjct: 433 VGDLTSTTALLYMYAKCGDLNLSRNVF-DMMRRKDVVAWNTMIIANAMHGNGKEALFLFD 491
Query: 266 EIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKE 309
++L V P +LS S +GV F R+ V+ +
Sbjct: 492 KMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPD 537
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 113/244 (46%), Gaps = 6/244 (2%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G L + + G ++ +P + TLI+ +GL+ + + Y+ ++ G
Sbjct: 101 GLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGI 160
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
+PD F++ +C+ + +++H + + G DV V ++LI Y +C C++ + +
Sbjct: 161 KPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARR 220
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F + DVV W+S+ + Y G + +++F +M + N +T S+L AC+
Sbjct: 221 VFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKD 280
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTC--VVDLLGRCGYLDEAAALIRNMPVKANAIIWKT 246
+ G E V R + + C +V L +C + EA + MP + + + W
Sbjct: 281 LKSGKEIHGFAV---RHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHR-DVVSWNG 336
Query: 247 LLSA 250
+L+A
Sbjct: 337 VLTA 340
>gi|125534384|gb|EAY80932.1| hypothetical protein OsI_36110 [Oryza sativa Indica Group]
Length = 770
Score = 313 bits (803), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 164/461 (35%), Positives = 268/461 (58%), Gaps = 37/461 (8%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQ--NGLAEDV-- 56
G E +L +S ++Y++ G E ++ M ++I W +I+G AQ + +D+
Sbjct: 311 GCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQA 370
Query: 57 -------LDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV 109
L + ++ +PD TF S++S CS + L QG+QIHA+ +K+G DV V
Sbjct: 371 RSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVV 430
Query: 110 ISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEF 169
S+L++MY++CGC+ D+ K FLE V W+SMI+ Y HG+ +EAI LFE+M
Sbjct: 431 NSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGV 490
Query: 170 EANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAA 229
N++TFVSLL ACS+ GL E+ +FD+M K+Y +P ++HY C++D+ R G +++A
Sbjct: 491 RPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAF 550
Query: 230 ALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAK 289
+ I+ + N IW +L++ C++H + ++A A+++L + P+ Y+LL N++ S +
Sbjct: 551 SFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYISTE 610
Query: 290 RWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMK 349
RWQ V+ R+ M++ +V SW+ IK++V+ F D++HP++ E+ LE L + K
Sbjct: 611 RWQDVARVRKLMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQATELYQLLENLLEKAK 670
Query: 350 LRGYVPDTGADMHDMDSEEKEY--NLKHHSEKLAIAFAEHTRGLIVMLP----------- 396
GY P A++ D + +EK +LKHHSE+LA+A GL+ P
Sbjct: 671 AIGYEPYQNAELSDSEDDEKPAAGSLKHHSERLAVAL-----GLLQTPPGATVRVTKNIT 725
Query: 397 --------FKYISEIKNREIIVRDASRFHHFRNGKCSCGDY 429
K S ++NREIIVRD+ R H F++G+CSCGD+
Sbjct: 726 MCRDCHSSIKLFSLLENREIIVRDSKRLHKFKDGRCSCGDF 766
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 137/288 (47%), Gaps = 16/288 (5%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNG-LAEDVLDQYNLMRMVG 67
G+SL +Y K GSL + +P +NVI W T+I+ A++ E L + M M G
Sbjct: 217 GNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGLSLFIDMLMDG 276
Query: 68 FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV 127
P++ T SV+S C L G+Q+ A K G ++ V +S + +Y R G D+++
Sbjct: 277 VMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAM 336
Query: 128 KTFLECEYSDVVLWSSMIAAYG-----------FHGKGEEAINLFEQMEQKEFEANDVTF 176
+ F + E + ++ W++MI+ Y +G +A+ +F +++ + + TF
Sbjct: 337 RLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTF 396
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
S+L CS E+G + +K + + + +V++ +CG + +A MP
Sbjct: 397 SSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVN-SALVNMYNKCGCIQDANKAFLEMP 455
Query: 237 VKANAIIWKTLLSACKTHKSTDMAGRIAEE--ILGVNPQDAAPYVLLS 282
+ + W +++S H A ++ EE + GV P + LLS
Sbjct: 456 TR-TFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLS 502
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 118/256 (46%), Gaps = 13/256 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D+ +SL + YM+ G+ + ++ MP RNV+ W L+ G N L+ +
Sbjct: 108 GAGADMFVATSLVNAYMRCGAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVF 167
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M +G P T + +++C + G+Q+H +K GA + +SL S+Y++
Sbjct: 168 VEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKL 227
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEE-AINLFEQMEQKEFEANDVTFVSL 179
G LD +++ F +V+ W++MI+A + E ++LF M N+ T S+
Sbjct: 228 GSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGLSLFIDMLMDGVMPNEFTLTSV 287
Query: 180 LYACSHCGLK-----EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRN 234
+ S CG + K ++ F + P +++ T + L R G DEA L
Sbjct: 288 M---SLCGTRLDLNLGKQVQAFSFKIGCETNLP-VKNSTMYLYL--RKGETDEAMRLFEQ 341
Query: 235 MPVKANAIIWKTLLSA 250
M A+ I W ++S
Sbjct: 342 ME-DASIITWNAMISG 356
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 2/177 (1%)
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
+V ++ C E+ +LG + +H + K GA D+ V +SL++ Y RCG D+ + F
Sbjct: 81 YVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGAARDARRLFDGMP 140
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGME 194
+VV W++++ Y + + + +F +M + + T + L AC + G +
Sbjct: 141 ERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQ 200
Query: 195 FFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSAC 251
+ KY + + L + G LD A +P K N I W T++SAC
Sbjct: 201 VHGYAI-KYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEK-NVITWTTMISAC 255
>gi|222629025|gb|EEE61157.1| hypothetical protein OsJ_15124 [Oryza sativa Japonica Group]
Length = 383
Score = 313 bits (803), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 157/388 (40%), Positives = 237/388 (61%), Gaps = 25/388 (6%)
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M G +PD + V ++ + + L++L +G++IH +++ ++ V+SSL+ MYS CG
Sbjct: 1 MLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAVVSSLVDMYSGCGS 60
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
++ ++K F E + DVVLW++MI A G HG G++AI +F++M + + V+F++LLYA
Sbjct: 61 MNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVSFLALLYA 120
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
CSH L ++G + D+MV KY+ +P EHY CVVDLLGR G +EA I++MP++ ++
Sbjct: 121 CSHSKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTEEAYKFIKSMPLEPKSV 180
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMR 302
+W LL AC+ HK+ ++A +++L + P + YVL+SN+ A +W V E R M
Sbjct: 181 VWCALLGACRIHKNHELAMIATDKLLELEPDNPGNYVLVSNVFAEMGKWNNVKEIRTKMT 240
Query: 303 ERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRG-YVPDTGADM 361
E+ ++K+P SW+EI N VH FT D SH S I L L E+T +++ G YV DT +
Sbjct: 241 EQGLRKDPACSWIEIGNTVHTFTARDHSHRDSQAIHLKLAEITEKLRREGQYVEDTSFVL 300
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVM---LPF----------------KYISE 402
HD+ EEK L HSE+LAI+F GLI P K +S+
Sbjct: 301 HDVSEEEKIDLLHRHSERLAISF-----GLISTASGTPLRIAKNLRVCGDCHEFTKLVSK 355
Query: 403 IKNREIIVRDASRFHHFRNGKCSCGDYW 430
+ REI+VRDA+RFHHF G CSCGD+W
Sbjct: 356 LFEREIVVRDANRFHHFSGGTCSCGDFW 383
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 43/91 (47%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F ++ SSL MY GS+ KV ++V+ W +I +G + + +
Sbjct: 41 FPVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFK 100
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQ 92
M G PD ++F++++ +CS + +G+
Sbjct: 101 RMLETGVSPDHVSFLALLYACSHSKLVDEGK 131
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 313 bits (803), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 165/444 (37%), Positives = 255/444 (57%), Gaps = 16/444 (3%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E D V +++ Y S +V+ MP ++++AW LI+ QNG + L ++
Sbjct: 295 EKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHE 354
Query: 63 MRMV-GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
+++ + ++IT VS +S+C+++ L G+ IH+ + K G ++ V S+LI MYS+CG
Sbjct: 355 LQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCG 414
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
L+ S + F E DV +WS+MI HG G EA+++F +M++ + N VTF ++
Sbjct: 415 DLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFC 474
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
ACSH GL ++ F M Y P +HY C+VD+LGR GYL++A I MP+ +
Sbjct: 475 ACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPST 534
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
+W LL ACK H + ++A +L + P++ +VLLSNI+A +W+ VSE R+ M
Sbjct: 535 SVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHM 594
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
R +KKEPG S +EI +H+F GD +HP S ++ L E+ ++K GY P+ +
Sbjct: 595 RVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVL 654
Query: 362 HDMDSEE-KEYNLKHHSEKLAIAF----AEHTRGLIVMLPF----------KYISEIKNR 406
++ EE KE +L HSEKLAI + E + + V+ K IS++ +R
Sbjct: 655 QIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDR 714
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EIIVRD RFHHFRNG+CSC D+W
Sbjct: 715 EIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 144/296 (48%), Gaps = 19/296 (6%)
Query: 20 GSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVG---FRPDKITFV 76
SL KV +P N AW TLI A + VL + + MV P+K TF
Sbjct: 78 ASLEYARKVFDEIPKPNSFAWNTLIRAYASG--PDPVLSIWAFLDMVSESQCYPNKYTFP 135
Query: 77 SVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYS 136
+I + +E+++L GQ +H VK+ DV V +SLI Y CG LD + K F +
Sbjct: 136 FLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEK 195
Query: 137 DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFF 196
DVV W+SMI + G ++A+ LF++ME ++ +A+ VT V +L AC+ K + +EF
Sbjct: 196 DVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACA----KIRNLEFG 251
Query: 197 DLM---VKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKT 253
+ +++ R L ++D+ +CG +++A L M K N + W T+L
Sbjct: 252 RQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDN-VTWTTMLDGYAI 310
Query: 254 HKSTDMAGRIAEEILGVNPQD--AAPYVLLSNIHASAKRWQGVSEFREAMRERNVK 307
+ + A E+L PQ A L+S + K + + F E ++N+K
Sbjct: 311 SEDYEA----AREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMK 362
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 142/297 (47%), Gaps = 38/297 (12%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ +SL H Y G L KV + ++V++W ++I G Q G + L+ + M
Sbjct: 165 DVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKME 224
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+ +T V V+S+C+++ L G+Q+ + + + ++++ + ++++ MY++CG ++
Sbjct: 225 SEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIE 284
Query: 125 DSVKTFLECE-------------------------------YSDVVLWSSMIAAYGFHGK 153
D+ + F E D+V W+++I+AY +GK
Sbjct: 285 DAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGK 344
Query: 154 GEEAINLFEQME-QKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY 212
EA+ +F +++ QK + N +T VS L AC+ G E G + +KK+ +
Sbjct: 345 PNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELG-RWIHSYIKKHGIRMNFHVT 403
Query: 213 TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH----KSTDMAGRIAE 265
+ ++ + +CG L+++ + ++ K + +W ++ H ++ DM ++ E
Sbjct: 404 SALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQE 459
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 71/156 (45%), Gaps = 4/156 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G ++ S+L HMY K G L + +V + R+V W +I G A +G + +D +
Sbjct: 395 GIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMF 454
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQI-HAEVVKAGASLDVGVISSLISMYSR 119
M+ +P+ +TF +V +CS + + + + H G + + ++ + R
Sbjct: 455 YKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGR 514
Query: 120 CGCLDDSVKTFLECE--YSDVVLWSSMIAAYGFHGK 153
G L+ +VK F+E +W +++ A H
Sbjct: 515 SGYLEKAVK-FIEAMPIPPSTSVWGALLGACKIHAN 549
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 313 bits (803), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 165/444 (37%), Positives = 254/444 (57%), Gaps = 16/444 (3%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E D V +++ Y S +V+ MP ++++AW LI+ QNG + L ++
Sbjct: 297 EKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHE 356
Query: 63 MRMV-GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
+++ + ++IT VS +S+C+++ L G+ IH+ + K G ++ V S+LI MYS+CG
Sbjct: 357 LQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCG 416
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
L+ + + F E DV +WS+MI HG G EA+++F +M++ + N VTF ++
Sbjct: 417 DLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFC 476
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
ACSH GL ++ F M Y P +HY C+VD+LGR GYL++A I MP+ +
Sbjct: 477 ACSHTGLVDEAESLFYKMESSYGIVPEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPPST 536
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
+W LL ACK H + +A +L + P++ +VLLSNI+A + +W VSE R+ M
Sbjct: 537 SVWGALLGACKIHANLSLAEMACTRLLELEPRNDGAHVLLSNIYAKSGKWDNVSELRKHM 596
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
R +KKEPG S +EI +H+F GD +HP S ++ L E+ ++K GY P+ +
Sbjct: 597 RVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEMSHVL 656
Query: 362 HDMDSEE-KEYNLKHHSEKLAIAF----AEHTRGLIVMLPF----------KYISEIKNR 406
++ EE KE +L HSEKLAI + E + + V+ K IS++ NR
Sbjct: 657 QIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKAIRVIKNLRMCGDCHAVAKLISQLYNR 716
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EIIVRD RFHHFRNG+CSC D+W
Sbjct: 717 EIIVRDRYRFHHFRNGQCSCNDFW 740
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 142/297 (47%), Gaps = 20/297 (6%)
Query: 20 GSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR----PDKITF 75
SL KV +P N W TLI A + V + + MV P+K TF
Sbjct: 79 ASLEYARKVFDEIPQPNSFTWNTLIRAYASG--PDPVCSIWAFLDMVSSESQCYPNKYTF 136
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
+I + +E+++L GQ +H +K+ DV V +SLI Y CG LD + K F +
Sbjct: 137 PFLIKAAAEVSSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKE 196
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
DVV W+SMI + G ++A+ LF++ME ++ +A+ VT V +L AC+ K + +EF
Sbjct: 197 KDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACA----KIRDLEF 252
Query: 196 FDLM---VKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACK 252
+ +++ R L ++D+ +CG +++A L M K N + W T+L
Sbjct: 253 GRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDN-VTWTTMLDGYA 311
Query: 253 THKSTDMAGRIAEEILGVNPQD--AAPYVLLSNIHASAKRWQGVSEFREAMRERNVK 307
+ + A E+L P+ A L+S + K + + F E ++N+K
Sbjct: 312 ISEDYEA----AREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIK 364
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 141/297 (47%), Gaps = 38/297 (12%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ +SL H Y G L KV + ++V++W ++I G Q G + L+ + M
Sbjct: 167 DVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKME 226
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+ +T V V+S+C+++ L G+++ + + + ++++ + ++++ MY++CG ++
Sbjct: 227 SEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIE 286
Query: 125 DSVKTFLECE-------------------------------YSDVVLWSSMIAAYGFHGK 153
D+ + F E D+V W+++I+AY +GK
Sbjct: 287 DAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGK 346
Query: 154 GEEAINLFEQME-QKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY 212
EA+ +F +++ QK + N +T VS L AC+ G E G + +KK K
Sbjct: 347 PNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELG-RWIHSYIKKNGIKMNFYVT 405
Query: 213 TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH----KSTDMAGRIAE 265
+ ++ + +CG L++A + ++ K + +W ++ H ++ DM ++ E
Sbjct: 406 SALIHMYSKCGDLEKAREVFNSVE-KRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQE 461
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 74/155 (47%), Gaps = 4/155 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +++ S+L HMY K G L + +V + R+V W +I G A +G + +D +
Sbjct: 397 GIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMF 456
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSR 119
M+ +P+ +TF +V +CS + + + + ++ + G + + ++ + R
Sbjct: 457 YKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHYACIVDVLGR 516
Query: 120 CGCLDDSVKTFLECE--YSDVVLWSSMIAAYGFHG 152
G L+ +VK F+E +W +++ A H
Sbjct: 517 SGYLEKAVK-FIEAMPIPPSTSVWGALLGACKIHA 550
>gi|125554650|gb|EAZ00256.1| hypothetical protein OsI_22267 [Oryza sativa Indica Group]
Length = 602
Score = 313 bits (803), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 157/449 (34%), Positives = 253/449 (56%), Gaps = 24/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G LD+V+ +++ + G + + +V MP RN+++W ++I+G + D L+ +
Sbjct: 159 GGALDVVSWTTMVGGLCRLGLVDDAREVFDAMPARNLVSWNSMISGYVKADRFLDALEVF 218
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ MR +G + S + +C+ LG+G++I+ V ++G +D + ++++ MY +C
Sbjct: 219 DEMRALGVEGNGFVATSALVACTGAGALGRGREIYRWVEQSGIEVDAKLATAVVDMYCKC 278
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
GC+D++ + F + W+ MI + HG+ ++A+ LF QME +DVT +++L
Sbjct: 279 GCVDEAWRVFDSLPARGLTTWNCMIGGFAVHGRCDDALELFHQMEAAGVAPDDVTLLNVL 338
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+H G +G + + +V ++ +P+ EHY C+VDL GR G LDEA +I MP+ +
Sbjct: 339 TACAHAGEVSEGRRYLNHIVSRHGIEPKGEHYGCMVDLFGRAGQLDEAKKVIDEMPMDPD 398
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+ LL ACK H D+ I ++ ++P ++ YVLL+N+ A A RW V + R
Sbjct: 399 LAVLGALLGACKIHGDVDLGEAIGWRVIDLDPDNSGRYVLLANLLAGAGRWDEVGKVRRL 458
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M ERNV KE G S +E+ + +F G+ HP++ EI ++ S ++ GYVPDTG
Sbjct: 459 MDERNVSKEAGRSVIEVDGEACEFRCGNLRHPQAREIYAMAVDMVSRIRAEGYVPDTGEA 518
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
+HD+ E+KE L HSEKLAIAF GL+ P KY+S
Sbjct: 519 LHDVAEEDKEAALLCHSEKLAIAF-----GLLRARPRETLRITKNLRVCRDCHEATKYVS 573
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+ REI+VRD SRFHHF++G CSC DYW
Sbjct: 574 RVFGREIVVRDRSRFHHFKDGMCSCKDYW 602
>gi|359487598|ref|XP_002278925.2| PREDICTED: pentatricopeptide repeat-containing protein At3g56550
[Vitis vinifera]
Length = 603
Score = 313 bits (803), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 167/448 (37%), Positives = 255/448 (56%), Gaps = 18/448 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G++ D+V ++L Y +G + KV MP R++++W ++I+ Q GL E+ L Y
Sbjct: 156 GYDQDVVLCTNLIRSYAGNGLIETAHKVFEEMPARDLVSWNSMISCYCQTGLHEEALKMY 215
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ MR+ D T VS++SSC+ + L G Q+H + ++ V ++LI MY++C
Sbjct: 216 DQMRISNVGFDGFTLVSLLSSCAHVGALHMGVQMHRFAGERRLVENIFVGNALIDMYAKC 275
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L ++ F DV W+SMI YG HG+G+EAI F M N +TF+ LL
Sbjct: 276 GSLASALSIFNSMPKRDVFTWNSMIVGYGVHGRGDEAITFFGSMLMAGVRPNSITFLGLL 335
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
CSH GL ++G+++F +M ++ KP ++HY C+VDL GR G L EA +IR+ P + +
Sbjct: 336 CGCSHQGLVKEGVQYFHMMSSEFNLKPGIKHYGCMVDLFGRAGKLKEALEVIRSSPSQHD 395
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
++W+TLL +CK H++ ++ ++ + A VLLS I+A AK QGV+ R+
Sbjct: 396 PVLWRTLLGSCKIHRNVEIGEMAMRNLVQLGSLGAGDCVLLSGIYAEAKDLQGVARMRKL 455
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
++ R +K PG SW+E+ +QVH+F + DKSHP S EI LEE+ L GY + +
Sbjct: 456 IQSRGIKTTPGWSWIEVGDQVHRFVVDDKSHPDSREIYRKLEEVIHRASLVGYAMEESSL 515
Query: 361 MHDMDSEEKEY----NLKHHSEKLAIAFA-----EHTRGLIVMLP---------FKYISE 402
+ +S +EY + +HSEKLAIA+ E T LIV K++S
Sbjct: 516 VAAPESNTQEYCWETSTSYHSEKLAIAYGLARTPEGTSLLIVKNLRVCRDCHNFTKFVSM 575
Query: 403 IKNREIIVRDASRFHHFRNGKCSCGDYW 430
+REIIVRD RFHHF+ G CSC ++W
Sbjct: 576 AFDREIIVRDRVRFHHFKGGHCSCKEFW 603
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 136/299 (45%), Gaps = 9/299 (3%)
Query: 19 SGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNG--LAEDVLDQYNLMRMVGF-RPDKITF 75
SGSL + V + AW ++I G +Q+ L + YN M RPD TF
Sbjct: 70 SGSLAYAQLVFHRIHNPQTPAWNSMIRGFSQSPSPLQLQAIVFYNHMLSASHARPDTYTF 129
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
++ +C E G+ +++H +++ G DV + ++LI Y+ G ++ + K F E
Sbjct: 130 SFLLKACEEAKEEGKCREVHGFIIRFGYDQDVVLCTNLIRSYAGNGLIETAHKVFEEMPA 189
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
D+V W+SMI+ Y G EEA+ +++QM + T VSLL +C+H G G++
Sbjct: 190 RDLVSWNSMISCYCQTGLHEEALKMYDQMRISNVGFDGFTLVSLLSSCAHVGALHMGVQM 249
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK 255
++ R + ++D+ +CG L A ++ +MP K + W +++ H
Sbjct: 250 HRFAGER-RLVENIFVGNALIDMYAKCGSLASALSIFNSMP-KRDVFTWNSMIVGYGVHG 307
Query: 256 STDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGV 312
D A +L GV P LL +GV F E N+K PG+
Sbjct: 308 RGDEAITFFGSMLMAGVRPNSITFLGLLCGCSHQGLVKEGVQYFHMMSSEFNLK--PGI 364
>gi|357509743|ref|XP_003625160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360204|gb|ABN08217.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355500175|gb|AES81378.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 596
Score = 313 bits (803), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 170/447 (38%), Positives = 257/447 (57%), Gaps = 18/447 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
+ LD+ GSS+ MY K G + V MP RNV++W LI G Q G ++ L +
Sbjct: 151 AYHLDIFVGSSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLIYGYVQLGEDDESLRLF 210
Query: 61 N--LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
L+ + T SV+ C L G+ IH K V SSLIS+YS
Sbjct: 211 KRFLVEEENEGVNDFTLSSVLRVCGGSTLLQMGRLIHGLSFKTSFDSSCFVASSLISLYS 270
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQ-KEFEANDVTFV 177
+CG ++++ F E ++ +W++M+ A H ++ LF++M+ +AN +TF+
Sbjct: 271 KCGVVEEAYDVFEEVTVRNLGMWNAMLIACAQHAHTDKTFELFDKMKSVGGMKANFITFL 330
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
+LYACSH GL EKG +F+LM K Y +P +HY+ +VDLLGR G L++A LI MP+
Sbjct: 331 CVLYACSHAGLVEKGKYYFELM-KDYGIEPGTQHYSTMVDLLGRAGKLNDAVKLIEEMPM 389
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEF 297
+ +W LL+ C+ H +T +A +A+ + + + +V+LSN +A+A RW+ ++
Sbjct: 390 EPTESVWGALLTGCRLHGNTKLASYVADRVSELGSVSSGLHVMLSNAYAAAGRWEEAAKA 449
Query: 298 REAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDT 357
R+ MR+R +KKE G+SW+E N++H F GD+SH +S+EI L+EL EM GYV DT
Sbjct: 450 RKMMRDRGIKKETGLSWVEEGNRIHTFAAGDRSHAKSVEIYDKLDELGEEMDKAGYVADT 509
Query: 358 GADMHDMDSEEKEYNLKHHSEKLAIAFA----EHTRGLIVM----------LPFKYISEI 403
+ ++D EEK ++++HSE+LAIAF H + + VM K+IS+
Sbjct: 510 SFVLKEVDGEEKSRSIRYHSERLAIAFGFITFPHGQPIRVMKNLRVCGDCHTAIKFISKC 569
Query: 404 KNREIIVRDASRFHHFRNGKCSCGDYW 430
R IIVRD +RFH F +GKC+CGDYW
Sbjct: 570 TGRVIIVRDNNRFHRFEDGKCTCGDYW 596
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 141/307 (45%), Gaps = 12/307 (3%)
Query: 12 LAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPD 71
L + Y K+ ++ P ++ W ++I+ AQN L L+ + LM G PD
Sbjct: 61 LINFYSKTHLPYSSLQIFHDSPHKSATTWSSVISSFAQNDLPLLSLNYFRLMLRQGVPPD 120
Query: 72 KITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFL 131
F S SC L++L + +H +K LD+ V SS+I MY++CG + + F
Sbjct: 121 DHIFPSATKSCGILSSLPVAKMLHCFALKTAYHLDIFVGSSVIDMYAKCGDICYAHNVFD 180
Query: 132 ECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQ--MEQKEFEANDVTFVSLLYACSHCGLK 189
E Y +VV WS +I Y G+ +E++ LF++ +E++ ND T S+L C L
Sbjct: 181 EMPYRNVVSWSGLIYGYVQLGEDDESLRLFKRFLVEEENEGVNDFTLSSVLRVCGGSTLL 240
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
+ G L K + ++ L +CG ++EA + + V+ N +W +L
Sbjct: 241 QMGRLIHGLSFKTSFDSSCFV-ASSLISLYSKCGVVEEAYDVFEEVTVR-NLGMWNAMLI 298
Query: 250 ACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSE----FREAMRERN 305
AC H TD + +++ V A L ++A + G+ E + E M++
Sbjct: 299 ACAQHAHTDKTFELFDKMKSVGGMKANFITFLCVLYACSH--AGLVEKGKYYFELMKDYG 356
Query: 306 VKKEPGV 312
+ EPG
Sbjct: 357 I--EPGT 361
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 72/173 (41%), Gaps = 24/173 (13%)
Query: 87 TLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIA 146
+L +G Q+HA ++K G + LI+ YS+ S++ F + + WSS+I+
Sbjct: 35 SLPKGLQLHAHIIKLGLQTIPLLSHHLINFYSKTHLPYSSLQIFHDSPHKSATTWSSVIS 94
Query: 147 AYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS-----------HCGLKEKGMEF 195
++ + ++N F M ++ +D F S +C HC K
Sbjct: 95 SFAQNDLPLLSLNYFRLMLRQGVPPDDHIFPSATKSCGILSSLPVAKMLHC-FALKTAYH 153
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
D+ V + V+D+ +CG + A + MP + N + W L+
Sbjct: 154 LDIFVG-----------SSVIDMYAKCGDICYAHNVFDEMPYR-NVVSWSGLI 194
>gi|242032459|ref|XP_002463624.1| hypothetical protein SORBIDRAFT_01g003150 [Sorghum bicolor]
gi|241917478|gb|EER90622.1| hypothetical protein SORBIDRAFT_01g003150 [Sorghum bicolor]
Length = 607
Score = 313 bits (803), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 168/446 (37%), Positives = 253/446 (56%), Gaps = 16/446 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGS--LVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLD 58
GF D ++L HMY G L + V M +V+ W +I G + GL+ D +
Sbjct: 162 GFATDQYVSNTLIHMYSCFGGEFLGDARNVFDRMDKSSVVTWSAMIGGYVRGGLSSDAVG 221
Query: 59 QYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
+ M+ G RPD++T + V+++ ++L L + + V + G V + ++LI +
Sbjct: 222 LFREMQASGVRPDEVTVIGVLAAAADLGALELARWVGRFVEREGIGKSVTLCNALIDALA 281
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+CG +D +V F E VV W+S+I A G+G+EA+ +FE M+ +DV F+
Sbjct: 282 KCGDVDGAVAVFQGMEERTVVSWTSVIDALAMEGRGKEAVAVFEAMKTAGVRPDDVVFIG 341
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+L ACSH G+ ++G +FD M +Y P++EHY C+VD+ GR G ++ A I MP+K
Sbjct: 342 VLTACSHAGMVDEGYGYFDSMKMEYGIDPKIEHYGCMVDMFGRAGMVERAMEFIHTMPMK 401
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
N IIW+TL++AC+ H ++ I +L P A YV+LSN++A +RW+ SE R
Sbjct: 402 PNPIIWRTLVAACRAHGRLELGESITRNLLNEYPAHEANYVMLSNVYALTQRWKEKSEIR 461
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
M +R +KK PG S +E+ +VH+F GD+SHP+ EI + +EE+ E+K G++ T
Sbjct: 462 REMSKRGIKKVPGCSLVELDGEVHEFIAGDESHPQWKEIYMMVEEMARELKHVGHISATS 521
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIK 404
+ D+D E+KE L+ HSEKLAIAF G V + K IS +
Sbjct: 522 EVLLDLDEEDKEGALQWHSEKLAIAFVLLRTPPGTQVRVVKNLRVCSDCHAAIKCISLVY 581
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
NREIIVRD SRFH F+NG CSC D+W
Sbjct: 582 NREIIVRDRSRFHRFKNGSCSCNDFW 607
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 107/241 (44%), Gaps = 10/241 (4%)
Query: 42 TLIAGKAQNGLAEDVLDQ---YNLMRMVGFRPDKITFVSVISSCSELATL-GQGQQIHAE 97
TLI A + L L + LM P+K TF ++ +C+ L G G Q HA
Sbjct: 98 TLIRAHAASPLPSARLRAAAFFPLMLRSAVLPNKFTFPFLLKACAALPGFPGVGLQAHAA 157
Query: 98 VVKAGASLDVGVISSLISMYSRCG--CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGE 155
+K G + D V ++LI MYS G L D+ F + S VV WS+MI Y G
Sbjct: 158 ALKFGFATDQYVSNTLIHMYSCFGGEFLGDARNVFDRMDKSSVVTWSAMIGGYVRGGLSS 217
Query: 156 EAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV 215
+A+ LF +M+ ++VT + +L A + + + V++ + +
Sbjct: 218 DAVGLFREMQASGVRPDEVTVIGVLAA-AADLGALELARWVGRFVEREGIGKSVTLCNAL 276
Query: 216 VDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQ 273
+D L +CG +D A A+ + M + + W +++ A A + E + GV P
Sbjct: 277 IDALAKCGDVDGAVAVFQGMEER-TVVSWTSVIDALAMEGRGKEAVAVFEAMKTAGVRPD 335
Query: 274 D 274
D
Sbjct: 336 D 336
>gi|359481819|ref|XP_002283419.2| PREDICTED: MATE efflux family protein 1 [Vitis vinifera]
Length = 977
Score = 313 bits (803), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 166/449 (36%), Positives = 254/449 (56%), Gaps = 36/449 (8%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G++ D+ GSS+ MY K G + + K+ MP RNV++W +I G +Q G E+ L +
Sbjct: 40 GYDCDVFVGSSMVDMYAKCGEIGDARKMFDEMPDRNVVSWSGMIYGYSQMGEDEEALRLF 99
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ + TF SV+ C L G+QIH +K V SSLIS+YS+C
Sbjct: 100 KQALIEDLDVNDFTFSSVVRVCGNSTLLELGKQIHGLCLKTSYDSSSFVGSSLISLYSKC 159
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++D+ F E ++ +W++M+ A H E+A +LF+QME + N +TF+ +L
Sbjct: 160 GVIEDAYLVFHEIPIRNLGMWNAMLIACAQHAHTEKAFDLFKQMEGVGMKPNFITFLCVL 219
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
YACSH GL EKG +F+LM K+Y +P +HY +VDLLGR G L +A ++I+ MP++
Sbjct: 220 YACSHAGLVEKGQFYFELM-KEYGIEPGAQHYASMVDLLGRAGKLKDAVSIIKKMPMEPT 278
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+W LL+ C+ H T++A +A+ + + P + ++A R++ + R+
Sbjct: 279 ESVWGALLTGCRIHGDTELASFVADRVFELGP-----------VSSAAGRYEEAARARKM 327
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
+R++ VKKE G+SW+E N++H F GD+SHP + +I LEEL EM+ GY+ DT
Sbjct: 328 LRDQGVKKETGLSWVEEGNRIHTFAAGDRSHPYTKDIYKKLEELGEEMERAGYIADTSFV 387
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
+ ++D EEK +++HSE+LAIAF GLI P K++S
Sbjct: 388 LQEVDGEEKNQTIRYHSERLAIAF-----GLISFPPERPIRVMKNLRVCGDCHTAIKFMS 442
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+ R IIVRD +RFH F +G CSC DYW
Sbjct: 443 KCCGRTIIVRDNNRFHRFEDGNCSCRDYW 471
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 107/204 (52%), Gaps = 2/204 (0%)
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
G RPD F S +C L+ GQ +H+ VK G DV V SS++ MY++CG + D+
Sbjct: 5 GVRPDDHIFPSATKACGILSRCDIGQSVHSFAVKTGYDCDVFVGSSMVDMYAKCGEIGDA 64
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHC 186
K F E +VV WS MI Y G+ EEA+ LF+Q ++ + ND TF S++ C +
Sbjct: 65 RKMFDEMPDRNVVSWSGMIYGYSQMGEDEEALRLFKQALIEDLDVNDFTFSSVVRVCGNS 124
Query: 187 GLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKT 246
L E G + L +K + ++ L +CG +++A + +P++ N +W
Sbjct: 125 TLLELGKQIHGLCLKTSYDSSSFVG-SSLISLYSKCGVIEDAYLVFHEIPIR-NLGMWNA 182
Query: 247 LLSACKTHKSTDMAGRIAEEILGV 270
+L AC H T+ A + +++ GV
Sbjct: 183 MLIACAQHAHTEKAFDLFKQMEGV 206
>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Glycine max]
Length = 986
Score = 313 bits (802), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 168/445 (37%), Positives = 251/445 (56%), Gaps = 19/445 (4%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPI--RNVIAWITLIAGKAQNGLAEDVLDQYNL 62
DL + L MY K S K+ + R+V+ W +I G AQ+G A + L ++
Sbjct: 542 DLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSG 601
Query: 63 MRMV--GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAG-ASLDVGVISSLISMYSR 119
M + +P+ T + +C+ LA L G+Q+HA V++ S+ + V + LI MYS+
Sbjct: 602 MFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSK 661
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G +D + F + V W+S++ YG HG+GE+A+ +F++M + + +TF+ +
Sbjct: 662 SGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVV 721
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
LYACSH G+ + G+ FF+ M K + P EHY C+VDL GR G L EA LI MP++
Sbjct: 722 LYACSHSGMVDHGINFFNRMSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKLINEMPMEP 781
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
++W LLSAC+ H + ++ A +L + + Y LLSNI+A+A+RW+ V+ R
Sbjct: 782 TPVVWVALLSACRLHSNVELGEFAANRLLELESGNDGSYTLLSNIYANARRWKDVARIRY 841
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M+ +KK PG SW++ + V F +GD+SHP+S +I L +L +K GYVP T
Sbjct: 842 TMKRTGIKKRPGCSWIQGRKGVATFYVGDRSHPQSQQIYETLADLIQRIKAIGYVPQTSF 901
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFA---EHTRGLIVML-----------PFKYISEIKN 405
+HD+D EEK L HSEKLA+A+ H R I + YIS+I
Sbjct: 902 ALHDVDDEEKGDLLFEHSEKLALAYGILTLHPRAPIRITKNLRICGDCHSAITYISKIIE 961
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
EII+RD+SRFHHF+NG CSC YW
Sbjct: 962 HEIILRDSSRFHHFKNGSCSCKGYW 986
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 153/359 (42%), Gaps = 50/359 (13%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAE------ 54
G D+ G+++ MY K G + E KV + M ++V++W ++ G +Q G E
Sbjct: 394 GLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLF 453
Query: 55 -----------------------------DVLDQYNLMRMVGFRPDKITFVSVISSCSEL 85
+ LD + M G RP+ +T VS++S+C +
Sbjct: 454 ERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSV 513
Query: 86 ATLGQGQQIHAEVVKAGASL--------DVGVISSLISMYSRCGCLDDSVKTF--LECEY 135
L G++ H +K +L D+ VI+ LI MY++C + + K F + +
Sbjct: 514 GALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKD 573
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQ--KEFEANDVTFVSLLYACSHCGLKEKGM 193
DVV W+ MI Y HG A+ LF M + K + ND T L AC+ G
Sbjct: 574 RDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGR 633
Query: 194 EFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKT 253
+ +++ + L C++D+ + G +D A + NMP + NA+ W +L++
Sbjct: 634 QVHAYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQR-NAVSWTSLMTGYGM 692
Query: 254 HKSTDMAGRIAEEILGVN--PQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEP 310
H + A R+ +E+ V P V+L S G++ F ++ V P
Sbjct: 693 HGRGEDALRVFDEMRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMSKDFGVDPGP 751
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 119/226 (52%), Gaps = 8/226 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLM---PIRNVIAWITLIAGKAQNGLAEDVL 57
GF ++ +++ MY K G+L + + I+++++W ++++ A L
Sbjct: 289 GFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTAL 348
Query: 58 DQYNLMRMVGF-RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISM 116
++ M PD I+ V+++ +C+ LA +G+Q+H +++G DV V ++++ M
Sbjct: 349 ALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDM 408
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
Y++CG ++++ K F ++ DVV W++M+ Y G+ E A++LFE+M ++ E + VT+
Sbjct: 409 YAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTW 468
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRC 222
+++ + G + ++ F M R + +V LL C
Sbjct: 469 TAVITGYAQRGQGCEALDVFRQMCDCGSR----PNVVTLVSLLSAC 510
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 161/366 (43%), Gaps = 32/366 (8%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIR--NVIAWITLIAGKAQNGLAEDVLDQYNLMRMV 66
++L Y+ S S ++ +P +V W LI G DV Y M+ +
Sbjct: 194 ATNLIGTYIASNSTAYAILLLERLPPSPSSVFWWNQLIRRALHLGSPRDVFTLYRQMKSL 253
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
G+ PD TF V +C+ L++L G +HA V ++G + +V V ++++SMY +CG L +
Sbjct: 254 GWTPDHYTFPFVFKACANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRHA 313
Query: 127 VKTFLE-CE--YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDV-TFVSLLYA 182
F + C D+V W+S+++AY + A+ LF +M + + DV + V++L A
Sbjct: 314 HNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNILPA 373
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
C+ +G + ++ VVD+ +CG ++EA + + M K + +
Sbjct: 374 CASLAASLRGRQVHGFSIRSGLVDDVFVG-NAVVDMYAKCGKMEEANKVFQRMKFK-DVV 431
Query: 243 IWKTLLS----ACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
W +++ A + + + R+ EE + + D + + I A+R QG
Sbjct: 432 SWNAMVTGYSQAGRLEHALSLFERMTEENIEL---DVVTWTAV--ITGYAQRGQGCEALD 486
Query: 299 EAMRERNVKKEPG----VSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYV 354
+ + P VS L V G ++H +++ L L+
Sbjct: 487 VFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLDG----------- 535
Query: 355 PDTGAD 360
PD GAD
Sbjct: 536 PDPGAD 541
>gi|449470352|ref|XP_004152881.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g56550-like [Cucumis sativus]
Length = 579
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 174/447 (38%), Positives = 254/447 (56%), Gaps = 19/447 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G++ D++ ++L Y GS+ +V MP R+++AW +I+ +Q GL ++ L Y
Sbjct: 135 GYDADVIVCTNLVKCYSAMGSVCIARQVFDKMPARDLVAWNAMISCFSQQGLHQEALQTY 194
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
N MR D T V +ISSC+ L L G Q+H + G + V ++LI MY++C
Sbjct: 195 NQMRSENVDIDGFTLVGLISSCAHLGALNIGVQMHRFARENGLDQSLYVGNALIDMYAKC 254
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G LD ++ F + D+ W+SMI YG HG+G EAI F+QM + + N VTF+ LL
Sbjct: 255 GSLDQAILIFDRMQRKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEARIQPNPVTFLGLL 314
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
CSH GL ++G+++F+LM K+R KP ++HY C+VDL GR G LD+A ++ N +
Sbjct: 315 CGCSHQGLVQEGVKYFNLMSSKFRLKPEVKHYGCLVDLYGRAGKLDKALEIVSNSS-HND 373
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILG-VNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
+++W+ LL +CK HK+ + G IA L + A +LL+ I+A K GV+ R+
Sbjct: 374 SVLWRILLGSCKIHKNVTI-GEIAMNRLSELGATSAGDCILLATIYAGEKDKAGVARMRK 432
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
++ + K PG SW+EI QVH+F + DKSH S+E+ L E+ + GYV D
Sbjct: 433 MIKSQGKKTTPGWSWIEIGEQVHKFVVDDKSHRYSVEVYEKLREVIHQASFFGYVGDESI 492
Query: 360 DMHDMDS--EEKEYNLKHHSEKLAIAF-----AEHTRGLIVM---------LPFKYISEI 403
DM S E + + +HSEKLAIAF A+ T+ IV K +S
Sbjct: 493 SSLDMLSTMETLKTSCTYHSEKLAIAFGLARTADGTQIRIVKNLRVCRDCHSFIKAVSVA 552
Query: 404 KNREIIVRDASRFHHFRNGKCSCGDYW 430
NREIIVRD RFHHF+ G+CSC DYW
Sbjct: 553 FNREIIVRDRVRFHHFKGGECSCNDYW 579
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 120/254 (47%), Gaps = 17/254 (6%)
Query: 19 SGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR-PDKITFVS 77
SGSL + + M AW ++I G AQ+ D + YN M F PD TF
Sbjct: 51 SGSLAYAQLLFHQMECPQTEAWNSIIRGFAQSSSPIDAIVFYNQMVCDSFSIPDTFTFSF 110
Query: 78 VISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSD 137
V+ +C + + +++H V++ G DV V ++L+ YS G + + + F + D
Sbjct: 111 VLKACERIKAERKCKEVHGSVIRCGYDADVIVCTNLVKCYSAMGSVCIARQVFDKMPARD 170
Query: 138 VVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFD 197
+V W++MI+ + G +EA+ + QM + + + T V L+ +C+H G G++
Sbjct: 171 LVAWNAMISCFSQQGLHQEALQTYNQMRSENVDIDGFTLVGLISSCAHLGALNIGVQ--- 227
Query: 198 LMVKKYRRKPRLEHY----TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKT 253
+ ++ R+ L+ ++D+ +CG LD+A + M K + W +++
Sbjct: 228 --MHRFARENGLDQSLYVGNALIDMYAKCGSLDQAILIFDRMQRK-DIFTWNSMIVGYGV 284
Query: 254 HKSTDMAGRIAEEI 267
H GR +E I
Sbjct: 285 H------GRGSEAI 292
>gi|296089786|emb|CBI39605.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 163/441 (36%), Positives = 252/441 (57%), Gaps = 33/441 (7%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
SS MY G LVE +++ + + + + G + L+ ++ M+ R
Sbjct: 197 SSAIRMYASFGRLVEARRILD-----DKGGEVDAVCMPDRKGCFMEALEIFHQMQKEKIR 251
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P K SV+S+C+ L L QG+ IH + LD + +SL+ MY++CG +D + +
Sbjct: 252 PRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEV 311
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F + +V W++MI HG+ E+AI+LF +M+ N++TFV +L AC+H GL
Sbjct: 312 FEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMD---INPNEITFVGVLNACAHGGLV 368
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
+KG+ F+ M K+Y +P++EHY C+VDLLGR G L EA ++ ++P + +W LL
Sbjct: 369 QKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLG 428
Query: 250 ACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKE 309
AC+ H + ++ R+ + +L + PQ++ Y LLSNI+A A RW+ V E R+ M+ER +K
Sbjct: 429 ACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTT 488
Query: 310 PGVSWLEI-KNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEE 368
PG S +++ + +VH+F +GD SHP+ +I L+++ +++ GY PD + D+D EE
Sbjct: 489 PGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDPSQVLFDIDEEE 548
Query: 369 KEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREII 409
KE + HSEKLAI F GLI P K IS++ NREII
Sbjct: 549 KETAVWQHSEKLAIGF-----GLINTSPGTTIRIVKNLRVCEDCHSATKLISQVYNREII 603
Query: 410 VRDASRFHHFRNGKCSCGDYW 430
VRD R+HHFRNG CSC D+W
Sbjct: 604 VRDRIRYHHFRNGACSCKDFW 624
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 126/278 (45%), Gaps = 16/278 (5%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
NV W +I +N + Y M + FRP+K T+ +V+ +CS+ + +G Q+H
Sbjct: 122 NVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVH 181
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGE 155
A +VK G D ++SS I MY+ G L ++ + L+ + +V + G
Sbjct: 182 AHLVKHGLGGDGHILSSAIRMYASFGRLVEA-RRILDDKGGEV----DAVCMPDRKGCFM 236
Query: 156 EAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLE----H 211
EA+ +F QM++++ S+L AC++ G ++G + Y ++ ++
Sbjct: 237 EALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGR-----WIHTYAKRNSIQLDGVL 291
Query: 212 YTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVN 271
T +VD+ +CG +D A + M K + W ++ H + A + + + +N
Sbjct: 292 GTSLVDMYAKCGRIDLAWEVFEKMSNKEVS-SWNAMIGGLAMHGRAEDAIDLFSK-MDIN 349
Query: 272 PQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKE 309
P + +L+ +G++ F +E V+ +
Sbjct: 350 PNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQ 387
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 90/187 (48%), Gaps = 12/187 (6%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
+LD V G+SL MY K G + +V M + V +W +I G A +G AED +D ++
Sbjct: 285 IQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFS 344
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSRC 120
M + P++ITFV V+++C+ + +G I + K G + ++ + R
Sbjct: 345 KMDI---NPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRA 401
Query: 121 GCLDDSVKTF--LECEYSDVVLWSSMIAAYGFHGK---GEEAINLFEQMEQKEFEANDVT 175
G L ++ K + E + V W +++ A HG GE + ++E + + T
Sbjct: 402 GLLTEAEKVVSSIPTEPTPAV-WGALLGACRKHGNVELGERVGKILLELEPQ--NSGRYT 458
Query: 176 FVSLLYA 182
+S +YA
Sbjct: 459 LLSNIYA 465
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 5/115 (4%)
Query: 92 QQIHAEVVKAGASLDVGVISSLISMYS-----RCGCLDDSVKTFLECEYSDVVLWSSMIA 146
+Q HA +++ G D + SL+ Y+ R + S++ F +V LW+ MI
Sbjct: 72 KQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIK 131
Query: 147 AYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVK 201
+ + +AI L+ +M F N T+ ++L ACS G+ +G++ +VK
Sbjct: 132 VCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVK 186
>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
Length = 739
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 154/393 (39%), Positives = 244/393 (62%), Gaps = 5/393 (1%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y ++G L E + V MP ++ ++W ++A +Q G +E+ L + M G ++ F
Sbjct: 327 YAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAF 386
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
V+S+C+++A L G Q+H +++AG + V ++L++MY +CG ++D+ F E E
Sbjct: 387 ACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEE 446
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
DVV W++MIA Y HG G+EA+ +F+ M + +D+T V +L ACSH GL EKG+ +
Sbjct: 447 RDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISY 506
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK 255
F M + + EHYTC++DLLGR G L EA L+++MP + ++ +W LL A + H+
Sbjct: 507 FYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHR 566
Query: 256 STDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWL 315
+ ++ AE+I + P++A YVLLSNI+AS+ +W+ + R M ER VKK PG SW+
Sbjct: 567 NPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWI 626
Query: 316 EIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKH 375
E++N+VH F+ GD HP +I +LE+L MK GYV T +HD++ EEKE+ LK+
Sbjct: 627 EVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKY 686
Query: 376 HSEKLAIAFAEHTRGLIVMLPFKYISEIKNREI 408
HSEKLA+A+ G++ + P + I IKN +
Sbjct: 687 HSEKLAVAY-----GILNIPPGRPIRVIKNLRV 714
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/315 (20%), Positives = 137/315 (43%), Gaps = 26/315 (8%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+V+ + + Y + G +VE ++ P+R+V W +++G AQNG+ E+ ++ M
Sbjct: 223 DVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAM- 281
Query: 65 MVGFRPDK--ITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
P++ +++ +++++ + + + + E+ +V +++++ Y++ G
Sbjct: 282 -----PERNAVSWNAMVAAYIQRRMMDEAK----ELFNMMPCRNVASWNTMLTGYAQAGM 332
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
L+++ F D V W++M+AAY G EE + LF +M + N F +L
Sbjct: 333 LEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLST 392
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVD-----LLGRCGYLDEAAALIRNMPV 237
C+ E GM+ +++ C V + +CG +++A M
Sbjct: 393 CADIAALECGMQLHGRLIRAGY------GVGCFVGNALLAMYFKCGNMEDARNAFEEMEE 446
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRIAE--EILGVNPQDAAPYVLLSNIHASAKRWQGVS 295
+ + + W T+++ H A I + P D +L+ S +G+S
Sbjct: 447 R-DVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGIS 505
Query: 296 EFREAMRERNVKKEP 310
F + V +P
Sbjct: 506 YFYSMHHDFGVTAKP 520
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 95/198 (47%), Gaps = 25/198 (12%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ + G++L MY K G++ + M R+V++W T+IAG A++G ++ L+ +
Sbjct: 413 GYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIF 472
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASL------DVGVISS-- 112
++MR +PD IT V V+++CS H+ +V+ G S D GV +
Sbjct: 473 DMMRTTSTKPDDITLVGVLAACS-----------HSGLVEKGISYFYSMHHDFGVTAKPE 521
Query: 113 ----LISMYSRCGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQK 167
+I + R G L ++ + + D +W +++ A H E + E++ +
Sbjct: 522 HYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFEL 581
Query: 168 EFE-ANDVTFVSLLYACS 184
E E A +S +YA S
Sbjct: 582 EPENAGMYVLLSNIYASS 599
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/286 (19%), Positives = 127/286 (44%), Gaps = 41/286 (14%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
E +++ + +M++G + + E++ MP R+ + ++AG + NG + +
Sbjct: 34 LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANG---RLPLAAS 90
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEV-VKAGASLDV--------GVIS- 111
L R + RPD ++ +++ + + ++L + + E+ V+ + +V G++S
Sbjct: 91 LFRAIP-RPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSL 149
Query: 112 -----------------SLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKG 154
+++ Y R G ++++ F DV+ W+++++ Y GK
Sbjct: 150 ARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKM 209
Query: 155 EEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC 214
EA LF++M ++ V++ ++ + G + FD + + +T
Sbjct: 210 SEARELFDRMPGRDV----VSWNIMVSGYARRGDMVEARRLFDAAPVR-----DVFTWTA 260
Query: 215 VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMA 260
VV + G L+EA + MP + NA+ W +++A + D A
Sbjct: 261 VVSGYAQNGMLEEARRVFDAMPER-NAVSWNAMVAAYIQRRMMDEA 305
>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 687
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 170/479 (35%), Positives = 262/479 (54%), Gaps = 49/479 (10%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWI------------------- 41
G ++L S+L +Y K S+ E V LMP R+V++W
Sbjct: 209 GMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLF 268
Query: 42 ----------------TLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSEL 85
+I G +NG +E+ ++ + M+ +GF+P++IT S++ +CS
Sbjct: 269 LKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFS 328
Query: 86 ATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMI 145
L G++IH V + D+ ++L+ MY++CG L+ S F DVV W++MI
Sbjct: 329 ENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMI 388
Query: 146 AAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRR 205
A HG G+EA+ LF++M + N VTF +L CSH L E+G++ F+ M + +
Sbjct: 389 IANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLV 448
Query: 206 KPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAE 265
+P HY+CVVD+ R G L+EA I+ MP++ A W LL+AC+ +K+ ++A A+
Sbjct: 449 EPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAK 508
Query: 266 EILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFT 325
++ + P + YV L NI +AK W S+ R M+ER + K PG SWL++ N+VH F
Sbjct: 509 KLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSWLQVGNKVHTFV 568
Query: 326 MGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFA 385
+GDKS+ S +I +L+EL +MK+ GY PDT + D+D EEK +L +HSEKLA+AF
Sbjct: 569 VGDKSNIESDKIYNFLDELVEKMKMAGYKPDTDYVLQDIDQEEKAESLCNHSEKLAVAFG 628
Query: 386 -EHTRGLIVMLPF-------------KYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+ G + F KY+S++ I+VRD+ RFHHF+NG CSC D W
Sbjct: 629 ILNLNGQSTIRVFKNLRICGDCHNAIKYMSKVVGVIIVVRDSLRFHHFKNGNCSCKDLW 687
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 159/346 (45%), Gaps = 39/346 (11%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D+ G++L H Y K + +V + +R+V++W +L + + G +D +
Sbjct: 108 GVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVF 167
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G +P+ +T S++ +C+EL L G++IH V+ G +++ V S+L+S+Y++C
Sbjct: 168 REMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKC 227
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAY--------GF---------------------- 150
+ ++ F + DVV W+ ++ AY GF
Sbjct: 228 LSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVI 287
Query: 151 -----HGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRR 205
+G+ EEA+ +F +M++ F+ N++T S+L ACS G E V ++ +
Sbjct: 288 GGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKE-IHCYVFRHWK 346
Query: 206 KPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAE 265
L T ++ + +CG L+ + + +M + + + W T++ A H + A + +
Sbjct: 347 VGDLTSTTALLYMYAKCGDLNLSRNVF-DMMRRKDVVAWNTMIIANAMHGNGKEALFLFD 405
Query: 266 EIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKE 309
++L V P +LS S +GV F R+ V+ +
Sbjct: 406 KMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPD 451
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 113/244 (46%), Gaps = 6/244 (2%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G L + + G ++ +P + TLI+ +GL+ + + Y+ ++ G
Sbjct: 15 GLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGI 74
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
+PD F++ +C+ + +++H + + G DV V ++LI Y +C C++ + +
Sbjct: 75 KPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARR 134
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F + DVV W+S+ + Y G + +++F +M + N +T S+L AC+
Sbjct: 135 VFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKD 194
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTC--VVDLLGRCGYLDEAAALIRNMPVKANAIIWKT 246
+ G E V R + + C +V L +C + EA + MP + + + W
Sbjct: 195 LKSGKEIHGFAV---RHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHR-DVVSWNG 250
Query: 247 LLSA 250
+L+A
Sbjct: 251 VLTA 254
>gi|296089864|emb|CBI39683.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 167/448 (37%), Positives = 255/448 (56%), Gaps = 18/448 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G++ D+V ++L Y +G + KV MP R++++W ++I+ Q GL E+ L Y
Sbjct: 138 GYDQDVVLCTNLIRSYAGNGLIETAHKVFEEMPARDLVSWNSMISCYCQTGLHEEALKMY 197
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ MR+ D T VS++SSC+ + L G Q+H + ++ V ++LI MY++C
Sbjct: 198 DQMRISNVGFDGFTLVSLLSSCAHVGALHMGVQMHRFAGERRLVENIFVGNALIDMYAKC 257
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L ++ F DV W+SMI YG HG+G+EAI F M N +TF+ LL
Sbjct: 258 GSLASALSIFNSMPKRDVFTWNSMIVGYGVHGRGDEAITFFGSMLMAGVRPNSITFLGLL 317
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
CSH GL ++G+++F +M ++ KP ++HY C+VDL GR G L EA +IR+ P + +
Sbjct: 318 CGCSHQGLVKEGVQYFHMMSSEFNLKPGIKHYGCMVDLFGRAGKLKEALEVIRSSPSQHD 377
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
++W+TLL +CK H++ ++ ++ + A VLLS I+A AK QGV+ R+
Sbjct: 378 PVLWRTLLGSCKIHRNVEIGEMAMRNLVQLGSLGAGDCVLLSGIYAEAKDLQGVARMRKL 437
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
++ R +K PG SW+E+ +QVH+F + DKSHP S EI LEE+ L GY + +
Sbjct: 438 IQSRGIKTTPGWSWIEVGDQVHRFVVDDKSHPDSREIYRKLEEVIHRASLVGYAMEESSL 497
Query: 361 MHDMDSEEKEY----NLKHHSEKLAIAFA-----EHTRGLIVMLP---------FKYISE 402
+ +S +EY + +HSEKLAIA+ E T LIV K++S
Sbjct: 498 VAAPESNTQEYCWETSTSYHSEKLAIAYGLARTPEGTSLLIVKNLRVCRDCHNFTKFVSM 557
Query: 403 IKNREIIVRDASRFHHFRNGKCSCGDYW 430
+REIIVRD RFHHF+ G CSC ++W
Sbjct: 558 AFDREIIVRDRVRFHHFKGGHCSCKEFW 585
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 136/299 (45%), Gaps = 9/299 (3%)
Query: 19 SGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNG--LAEDVLDQYNLMRMVGF-RPDKITF 75
SGSL + V + AW ++I G +Q+ L + YN M RPD TF
Sbjct: 52 SGSLAYAQLVFHRIHNPQTPAWNSMIRGFSQSPSPLQLQAIVFYNHMLSASHARPDTYTF 111
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
++ +C E G+ +++H +++ G DV + ++LI Y+ G ++ + K F E
Sbjct: 112 SFLLKACEEAKEEGKCREVHGFIIRFGYDQDVVLCTNLIRSYAGNGLIETAHKVFEEMPA 171
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
D+V W+SMI+ Y G EEA+ +++QM + T VSLL +C+H G G++
Sbjct: 172 RDLVSWNSMISCYCQTGLHEEALKMYDQMRISNVGFDGFTLVSLLSSCAHVGALHMGVQM 231
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK 255
++ R + ++D+ +CG L A ++ +MP K + W +++ H
Sbjct: 232 HRFAGER-RLVENIFVGNALIDMYAKCGSLASALSIFNSMP-KRDVFTWNSMIVGYGVHG 289
Query: 256 STDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGV 312
D A +L GV P LL +GV F E N+K PG+
Sbjct: 290 RGDEAITFFGSMLMAGVRPNSITFLGLLCGCSHQGLVKEGVQYFHMMSSEFNLK--PGI 346
>gi|224074129|ref|XP_002304264.1| predicted protein [Populus trichocarpa]
gi|222841696|gb|EEE79243.1| predicted protein [Populus trichocarpa]
Length = 499
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 166/446 (37%), Positives = 262/446 (58%), Gaps = 16/446 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + D + ++L +Y E KV M R+ IAW LI+ +N DVL +
Sbjct: 54 GHQSDSLLLTNLMDLYSLCDKGSEACKVFDEMRQRDTIAWNVLISCYMRNRRTRDVLVIF 113
Query: 61 NLMRM--VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
+ M +G PD +T + ++ +C+ L L G+++H +V+ G + +SLI+MYS
Sbjct: 114 DGMLSGELGCEPDDVTCLLLLQACANLGALEFGEKVHGHIVERGYDNATNLCNSLIAMYS 173
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+ G LD + F +VV WS++I+ +G G EAI FE+M + +D+TF
Sbjct: 174 QFGNLDKAFGVFKGMHNKNVVTWSAIISGLAMNGYGREAIGAFEEMLKMGVLPDDLTFTG 233
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+L ACS+CGL +KGM F M K++ P + HY C+VDLLGR G L +A LI +M VK
Sbjct: 234 VLSACSNCGLVDKGMIIFARMSKEFGIVPNIHHYGCMVDLLGRAGQLHQAYQLIMSMRVK 293
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
++ IW+TLL AC+ H++ + + E ++ + Q+A YVLL N+++S W+ V+E R
Sbjct: 294 PDSTIWRTLLGACRIHRNVILGEHVVEHLIELKAQEAGDYVLLFNLYSSVDNWKKVTELR 353
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
+ M+E+ ++ P S +E+K +VH+F + D SHP+ EI L+E++ ++K+ GYV +
Sbjct: 354 KFMKEKGIQTTPASSSIELKGKVHEFVVDDVSHPQKDEIYEMLDEISKQLKIAGYVAEIT 413
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAF-------------AEHTRGLIVMLPF-KYISEIK 404
+++ ++D+EEK Y L +HSEKLAIAF A++ R + F K +S +
Sbjct: 414 SELPNLDAEEKRYVLSYHSEKLAIAFGVLATPPGTTIRIAKNLRICVDCHNFAKILSGVY 473
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
NR++I+ D +RFHHFR G CSC DYW
Sbjct: 474 NRQVIITDHTRFHHFRGGHCSCNDYW 499
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 109/228 (47%), Gaps = 8/228 (3%)
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
Y MR G R D ++ VI + +L G+Q+HA ++ G D ++++L+ +YS
Sbjct: 12 YQEMRKKGLRADPVSLSFVIRCYIRICSLIGGEQVHARILSDGHQSDSLLLTNLMDLYSL 71
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEF--EANDVTFV 177
C ++ K F E D + W+ +I+ Y + + + + +F+ M E E +DVT +
Sbjct: 72 CDKGSEACKVFDEMRQRDTIAWNVLISCYMRNRRTRDVLVIFDGMLSGELGCEPDDVTCL 131
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
LL AC++ G E G + +V++ Y L ++ + + G LD+A + + M
Sbjct: 132 LLLQACANLGALEFGEKVHGHIVERGYDNATNL--CNSLIAMYSQFGNLDKAFGVFKGMH 189
Query: 237 VKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLS 282
K N + W ++S + A EE+L GV P D +LS
Sbjct: 190 NK-NVVTWSAIISGLAMNGYGREAIGAFEEMLKMGVLPDDLTFTGVLS 236
>gi|15232821|ref|NP_190337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206890|sp|Q9SN85.1|PP267_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g47530
gi|6522536|emb|CAB61979.1| putative protein [Arabidopsis thaliana]
gi|62320272|dbj|BAD94558.1| hypothetical protein [Arabidopsis thaliana]
gi|332644772|gb|AEE78293.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 591
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 163/454 (35%), Positives = 266/454 (58%), Gaps = 29/454 (6%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D + ++L +Y + + KV +P R+ ++W L + +N DVL +
Sbjct: 143 GFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLF 202
Query: 61 NLMR--MVG-FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMY 117
+ M+ + G +PD +T + + +C+ L L G+Q+H + + G S + + ++L+SMY
Sbjct: 203 DKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMY 262
Query: 118 SRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
SRCG +D + + F +VV W+++I+ +G G+EAI F +M + + T
Sbjct: 263 SRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLT 322
Query: 178 SLLYACSHCGLKEKGMEFFDLMVK-KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
LL ACSH GL +GM FFD M +++ KP L HY CVVDLLGR LD+A +LI++M
Sbjct: 323 GLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSME 382
Query: 237 VKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSE 296
+K ++ IW+TLL AC+ H ++ R+ ++ + ++A YVLL N +++ +W+ V+E
Sbjct: 383 MKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTE 442
Query: 297 FREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPD 356
R M+E+ + +PG S +E++ VH+F + D SHPR EI L E+ ++K+ GYV +
Sbjct: 443 LRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGYVAE 502
Query: 357 TGADMHDMDS-EEKEYNLKHHSEKLAIAFAEHTRGLIVMLP------------------- 396
+++H+++S EEK Y L++HSEKLAIAF G++V P
Sbjct: 503 ITSELHNLESEEEKGYALRYHSEKLAIAF-----GILVTPPGTTIRVTKNLRTCVDCHNF 557
Query: 397 FKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
K++S++ +R +IVRD SRFHHF+ G CSC D+W
Sbjct: 558 AKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 107/239 (44%), Gaps = 8/239 (3%)
Query: 79 ISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDV 138
+ C + L G QIH ++ G D ++++L+ +YS C D+ K F E D
Sbjct: 120 LKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDT 179
Query: 139 VLWSSMIAAYGFHGKGEEAINLFEQMEQKE---FEANDVTFVSLLYACSHCGLKEKGMEF 195
V W+ + + Y + + + + LF++M+ + + VT + L AC++ G + G +
Sbjct: 180 VSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQV 239
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK 255
D + + L +V + RCG +D+A + M + N + W L+S +
Sbjct: 240 HDF-IDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRER-NVVSWTALISGLAMNG 297
Query: 256 STDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGV 312
A E+L G++P++ LLS S +G+ F + MR K +P +
Sbjct: 298 FGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMM-FFDRMRSGEFKIKPNL 355
>gi|302781642|ref|XP_002972595.1| hypothetical protein SELMODRAFT_97496 [Selaginella moellendorffii]
gi|300160062|gb|EFJ26681.1| hypothetical protein SELMODRAFT_97496 [Selaginella moellendorffii]
Length = 606
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 156/446 (34%), Positives = 253/446 (56%), Gaps = 25/446 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D V +SL +MY + G + + E+ MP R+ ++W T++AG+ Q G L+ +M
Sbjct: 166 DPVVANSLLNMYRRCGGMDDFERAFWAMPSRDEVSWTTMLAGRIQCGREASALELLRVMD 225
Query: 65 MVGFR-PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
GFR +TF +++ +C L+ + QG+ +H ++ +G +DV + ++L++MY++CG +
Sbjct: 226 QDGFRITSALTFATLVDACGNLSAIAQGRHLHDRIITSGVCIDVVLHTALLNMYAKCGRV 285
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
D++ + F + + + +SSM+ AY +G +A+ LF MEQ ++ + VTF +LYAC
Sbjct: 286 DEARELFDQTLEPNNITFSSMVVAYARNGHFGDALKLFWSMEQDGYKPDSVTFTHVLYAC 345
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
SH G ++ +F + EH+ C VDLL R G+L +A + MP+ +++
Sbjct: 346 SHGGFVDQAWHYFTTLEPDRGIPLVAEHFGCAVDLLARAGWLADAEKFLNRMPIPPDSVS 405
Query: 244 WKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
W +LL AC+ H++ ++ R AE + + P A PY LLSNI++ A +W ++ ++ MR+
Sbjct: 406 WMSLLQACRIHRNVEIGARAAEHVFRLAPHRAGPYSLLSNIYSDAGKWDMAAKVQKLMRD 465
Query: 304 RNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHD 363
R +KK G SW+EI + +F +GD HP ++I ++ ++ MK GYVPDT +HD
Sbjct: 466 RGIKKPGGRSWIEINGKTSEFIVGDSWHPDLVQICQEIQRVSKVMKEHGYVPDTKQVLHD 525
Query: 364 MDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPFKYISEIKN------------------ 405
+ EEKE L HSEKLAI GLI P IS +KN
Sbjct: 526 AEEEEKEDILYFHSEKLAIGL-----GLIKTPPKTTISIVKNIRVCPDCHTAAKVISKVT 580
Query: 406 -REIIVRDASRFHHFRNGKCSCGDYW 430
R+I++RD + FHH +GKCSC DYW
Sbjct: 581 ERKIVIRDINLFHHMEDGKCSCRDYW 606
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 113/242 (46%), Gaps = 3/242 (1%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+ L Y + G + V P NV +W+ LI+ +N L L Y M++ G
Sbjct: 70 NKLVQAYGQCGDVESAHAVFACQPDPNVFSWMMLISACLRNALPRAALGHYRAMQLRGCH 129
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
PD ++ + ++ A L G+ I A + D V +SL++MY RCG +DD +
Sbjct: 130 PDAHVVSAIFCAVADTANLELGRSITAPLASTAMLHDPVVANSLLNMYRRCGGMDDFERA 189
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFE-ANDVTFVSLLYACSHCGL 188
F D V W++M+A G+ A+ L M+Q F + +TF +L+ AC +
Sbjct: 190 FWAMPSRDEVSWTTMLAGRIQCGREASALELLRVMDQDGFRITSALTFATLVDACGNLSA 249
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
+G D ++ + H T ++++ +CG +DEA L + ++ N I + +++
Sbjct: 250 IAQGRHLHDRIITSGVCIDVVLH-TALLNMYAKCGRVDEARELF-DQTLEPNNITFSSMV 307
Query: 249 SA 250
A
Sbjct: 308 VA 309
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 2/153 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +D+V ++L +MY K G + E ++ N I + +++ A+NG D L +
Sbjct: 264 GVCIDVVLHTALLNMYAKCGRVDEARELFDQTLEPNNITFSSMVVAYARNGHFGDALKLF 323
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEV-VKAGASLDVGVISSLISMYSR 119
M G++PD +TF V+ +CS + Q + G L + + +R
Sbjct: 324 WSMEQDGYKPDSVTFTHVLYACSHGGFVDQAWHYFTTLEPDRGIPLVAEHFGCAVDLLAR 383
Query: 120 CGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFH 151
G L D+ K D V W S++ A H
Sbjct: 384 AGWLADAEKFLNRMPIPPDSVSWMSLLQACRIH 416
>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 152/370 (41%), Positives = 234/370 (63%), Gaps = 1/370 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G LD GS+L MY K G L+E EK+ + + ++W ++I+G + +E+ +
Sbjct: 471 GMGLDWFVGSALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYF 530
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M +G PD T+ +V+ C+ +AT+ G+QIHA+++K DV + S+L+ MYS+C
Sbjct: 531 SQMLEMGIIPDNYTYATVLDVCANMATIELGKQIHAQILKLQLHSDVYIASTLVDMYSKC 590
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + DS F + D V WS+MI AY +HG GE+AINLFE+M+ + N F+S+L
Sbjct: 591 GNMQDSRLMFEKAPKRDYVTWSAMICAYAYHGLGEKAINLFEEMQLLNVKPNHTIFISVL 650
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+H G +KG+ +F M+ Y P++EHY+C+VDLLGR G ++EA LI +MP +A+
Sbjct: 651 RACAHMGYVDKGLHYFQKMLSHYGLDPQMEHYSCMVDLLGRSGQVNEALKLIESMPFEAD 710
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+IW+TLLS CK + ++A + +L ++PQD++ YVLL+N++A W V++ R
Sbjct: 711 DVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLANVYAIVGMWGEVAKMRSI 770
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+ +KKEPG SW+E++++VH F +GDK+HPRS EI L EMK GYVPD
Sbjct: 771 MKNCKLKKEPGCSWIEVRDEVHTFLVGDKAHPRSEEIYEQTHLLVDEMKWAGYVPDIDF- 829
Query: 361 MHDMDSEEKE 370
M D + EE++
Sbjct: 830 MLDEEMEEQD 839
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 127/254 (50%), Gaps = 10/254 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE D+V GS+L MY K L + +V R MP RN++ W +IAG QN + L +
Sbjct: 168 GFENDVVTGSALVDMYSKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLF 227
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M VG + T+ SV SC+ L+ G Q+H +K+ + D + ++ + MY++C
Sbjct: 228 KDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKC 287
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
+ D+ K F ++++I Y +G +A+++F+ +++ ++++ L
Sbjct: 288 ERMFDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGAL 347
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV----VDLLGRCGYLDEAAALIRNMP 236
ACS +G++ L V K L CV +D+ G+CG L EA + M
Sbjct: 348 TACSVIKRHLEGIQLHGLAV-----KCGLGFNICVANTILDMYGKCGALMEACLIFEEME 402
Query: 237 VKANAIIWKTLLSA 250
+ +A+ W +++A
Sbjct: 403 -RRDAVSWNAIIAA 415
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 128/275 (46%), Gaps = 4/275 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G ++ +++ MY K G+L+E + M R+ ++W +IA QN L +
Sbjct: 370 GLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKTLSLF 429
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M PD T+ SV+ +C+ L G +IH ++K+G LD V S+L+ MY +C
Sbjct: 430 VSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYGKC 489
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L ++ K E V W+S+I+ + + E A F QM + ++ T+ ++L
Sbjct: 490 GMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYATVL 549
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
C++ E G + + K + + + +VD+ +CG + ++ + P K +
Sbjct: 550 DVCANMATIELGKQ-IHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAP-KRD 607
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEE--ILGVNPQ 273
+ W ++ A H + A + EE +L V P
Sbjct: 608 YVTWSAMICAYAYHGLGEKAINLFEEMQLLNVKPN 642
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 135/277 (48%), Gaps = 8/277 (2%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F D + G++ MY K + + KV +P ++ +I G A+ LD +
Sbjct: 270 FAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALDIFQ 329
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
++ D+I+ +++CS + +G Q+H VK G ++ V ++++ MY +CG
Sbjct: 330 SLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCG 389
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
L ++ F E E D V W+++IAA+ + + + ++LF M + E +D T+ S++
Sbjct: 390 ALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVK 449
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY--TCVVDLLGRCGYLDEAAALIRNMPVKA 239
AC+ G E ++K L+ + + +VD+ G+CG L EA + + K
Sbjct: 450 ACAGQQALNYGTEIHGRIIKS---GMGLDWFVGSALVDMYGKCGMLMEAEKIHARLEEK- 505
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQD 274
+ W +++S + K ++ A R ++L G+ P +
Sbjct: 506 TTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDN 542
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 120/249 (48%), Gaps = 17/249 (6%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+++ ++L Y G++ + + MP R+V++W +L++ NG+ ++ + MR
Sbjct: 71 DVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMR 130
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+ D TF ++ +CS + G G Q+H ++ G DV S+L+ MYS+C LD
Sbjct: 131 SLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLD 190
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D+ + F E ++V WS++IA Y + + E + LF+ M + + T+ S+ +C+
Sbjct: 191 DAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCA 250
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHY------TCVVDLLGRCGYLDEAAALIRNMPVK 238
G+ F L + + + + T +D+ +C + +A + +P
Sbjct: 251 -------GLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNP 303
Query: 239 A----NAII 243
NAII
Sbjct: 304 PRQSYNAII 312
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 92/215 (42%), Gaps = 43/215 (20%)
Query: 72 KITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFL 131
K+TF ++ CS L L G+Q+H +++ G + V + L+ Y + ++ + K F
Sbjct: 6 KLTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFD 65
Query: 132 ECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEK 191
DV+ W+++I Y G A +LF+ M +++ V++ SLL H G+ K
Sbjct: 66 RMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDV----VSWNSLLSCYLHNGVNRK 121
Query: 192 GMEFFDLMVKKYRRKPR--------------LEHY----------------------TCV 215
+E F M + + P +E Y + +
Sbjct: 122 SIEIFVRM--RSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSAL 179
Query: 216 VDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
VD+ +C LD+A + R MP + N + W +++
Sbjct: 180 VDMYSKCKKLDDAFRVFREMPER-NLVCWSAVIAG 213
>gi|242037817|ref|XP_002466303.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
gi|241920157|gb|EER93301.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
Length = 606
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 165/414 (39%), Positives = 241/414 (58%), Gaps = 26/414 (6%)
Query: 37 VIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHA 96
V+++ +IA ++ + L + M+ G +P +T +SV+S+C+ L L G+ +H
Sbjct: 199 VVSYNAMIAAAVRSSRPGEALVLFREMQGKGLKPTSVTVISVLSACALLGALELGRWVHD 258
Query: 97 EVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEE 156
V K G V V ++LI MY++CG L+D++ F E D WS MI AY HG G E
Sbjct: 259 YVRKIGLGSLVKVSTALIDMYAKCGSLEDAIDVFQGMESKDRQAWSVMIVAYANHGYGRE 318
Query: 157 AINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVV 216
AI+LFE+M+++ + +D+TF+ +LYACSH GL +G+++FD M K + P ++HY CV
Sbjct: 319 AISLFEEMKKEGMKPDDITFLGVLYACSHSGLVSEGLQYFDDM-KDHGIVPGIKHYGCVT 377
Query: 217 DLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAA 276
DLL R G L+ A I +P+ I+W+TLLSAC H ++ R+ E IL ++
Sbjct: 378 DLLARSGQLERAYKFIDELPINPTPILWRTLLSACGGHGDFELGKRVFERILKLDDSHGG 437
Query: 277 PYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSME 336
YV+ SN+ A+ W+ ++ R+ M E+ V K PG S +EI N VH+F GD HP+S E
Sbjct: 438 DYVIFSNLCANTGYWEEMNMVRKLMSEKGVVKVPGCSSIEIDNTVHEFFAGDGRHPKSQE 497
Query: 337 IDLYLEELTSEMKLRGYVPDTGADMH-DMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVML 395
++E+ ++KL GYVP+T H +M EEK +LK+HSEKLAIAF GL+
Sbjct: 498 ARKMVDEVIDQLKLVGYVPNTSHVFHVEMGEEEKAISLKYHSEKLAIAF-----GLLNTA 552
Query: 396 P-------------------FKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
P K +S + NR II+RD +RFHHF G CSCGDYW
Sbjct: 553 PGATLRVVKNLRVCPDCHSMAKLVSMVFNRRIILRDLNRFHHFEEGICSCGDYW 606
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 109/217 (50%), Gaps = 6/217 (2%)
Query: 62 LMRMV--GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+RM+ G PD TFVS++ +C+ +G+Q HA VK GA+ V +LI+MY+
Sbjct: 121 FVRMLEEGVAPDTYTFVSLLKACAAARAGEEGRQAHALAVKLGAADHDYVRPTLINMYAE 180
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG + F + VV +++MIAA + EA+ LF +M+ K + VT +S+
Sbjct: 181 CGDARAARVMFGGTDGGCVVSYNAMIAAAVRSSRPGEALVLFREMQGKGLKPTSVTVISV 240
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L AC+ G E G D V+K ++ T ++D+ +CG L++A + + M K
Sbjct: 241 LSACALLGALELGRWVHD-YVRKIGLGSLVKVSTALIDMYAKCGSLEDAIDVFQGMESK- 298
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQD 274
+ W ++ A H A + EE+ G+ P D
Sbjct: 299 DRQAWSVMIVAYANHGYGREAISLFEEMKKEGMKPDD 335
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 93/194 (47%), Gaps = 2/194 (1%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L MY K GSL + V + M ++ AW +I A +G + + + M+ G +
Sbjct: 273 TALIDMYAKCGSLEDAIDVFQGMESKDRQAWSVMIVAYANHGYGREAISLFEEMKKEGMK 332
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
PD ITF+ V+ +CS + +G Q ++ G + + + +R G L+ + K
Sbjct: 333 PDDITFLGVLYACSHSGLVSEGLQYFDDMKDHGIVPGIKHYGCVTDLLARSGQLERAYKF 392
Query: 130 FLECEYSDV-VLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
E + +LW ++++A G HG E +FE++ + + +++ +V C++ G
Sbjct: 393 IDELPINPTPILWRTLLSACGGHGDFELGKRVFERILKLD-DSHGGDYVIFSNLCANTGY 451
Query: 189 KEKGMEFFDLMVKK 202
E+ LM +K
Sbjct: 452 WEEMNMVRKLMSEK 465
>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 868
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 149/356 (41%), Positives = 230/356 (64%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G L + GS+L MY K G + E EK+ + + +++W +I+G + +ED +
Sbjct: 490 GMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFF 549
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M +G PD T+ +V+ +C+ LAT+G G+QIHA+++K DV + S+L+ MYS+C
Sbjct: 550 SHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITSTLVDMYSKC 609
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + DS+ F + D V W++MI + +HG GEEA+ LFE M + + N TFVS+L
Sbjct: 610 GNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPNHATFVSVL 669
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH G +KG+ +F M Y +P+LEHY+C+VD+LGR G ++EA LI++MP +A+
Sbjct: 670 RACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLIQDMPFEAD 729
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
AIIW+TLLS CK + ++A + A +L ++P+D++ Y LLSNI+A A WQ VS+ R+
Sbjct: 730 AIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQQVSKIRQT 789
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPD 356
MR N+KKEPG SW+E+K++VH F + DK+HP+ I L+ L +M+ G P+
Sbjct: 790 MRSHNLKKEPGCSWIEVKDEVHTFLVCDKAHPKCEMIYSLLDLLICDMRRSGCAPE 845
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 130/260 (50%), Gaps = 10/260 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ D+V GS+L MY K SL + V +P +N I+W IAG QN L +
Sbjct: 187 GFDYDVVTGSALVDMYAKCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLF 246
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G + T+ SV SC+ L+ G Q+H +K DV V ++ + MY++C
Sbjct: 247 KEMQRKGIGVSQSTYASVFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKC 306
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
+ D+ K F ++ +++MI Y + +G +A LF Q+++ F ++V+ L
Sbjct: 307 DNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGAL 366
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV----VDLLGRCGYLDEAAALIRNMP 236
A + +G++ L +K L CV +D+ G+CG L EA+ L M
Sbjct: 367 SAAAVIKGHSEGLQLHGLAIKS-----NLSSNICVANAILDMYGKCGALVEASGLFDEME 421
Query: 237 VKANAIIWKTLLSACKTHKS 256
++ + + W +++AC+ ++S
Sbjct: 422 IR-DPVSWNAIITACEQNES 440
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 131/274 (47%), Gaps = 4/274 (1%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
++ +++ MY K G+LVE + M IR+ ++W +I QN L + M
Sbjct: 393 NICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTLSHFGAML 452
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
PD+ T+ SV+ +C+ G ++H ++K+G L + V S+L+ MYS+CG ++
Sbjct: 453 RSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMME 512
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
++ K E +V W+++I+ + K E++ F M + E ++ T+ ++L C+
Sbjct: 513 EAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCA 572
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
+ G + M+ K + + +VD+ +CG + ++ + R P K +++ W
Sbjct: 573 NLATVGLGKQIHAQMI-KLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAP-KRDSVTW 630
Query: 245 KTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAA 276
++ H + A + E +L + P A
Sbjct: 631 NAMICGFAYHGLGEEALELFEHMLHENIKPNHAT 664
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 134/275 (48%), Gaps = 4/275 (1%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F D++ G++ MY K ++ + K+ L+P N+ ++ +I G A+N +
Sbjct: 289 FGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFL 348
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
++ F D+++ +S+ + + +G Q+H +K+ S ++ V ++++ MY +CG
Sbjct: 349 QLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCG 408
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
L ++ F E E D V W+++I A + + ++ F M + + E ++ T+ S+L
Sbjct: 409 ALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLK 468
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
AC+ GME ++K ++ + +VD+ +CG ++EA + + +
Sbjct: 469 ACAGQRAFSNGMEVHGRIIKS-GMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLE-EQTM 526
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQD 274
+ W ++S K ++ + R +L GV P +
Sbjct: 527 VSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDN 561
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 108/233 (46%), Gaps = 2/233 (0%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIR-NVIAWITLIAGKAQNGLAEDVLDQYNLM 63
D+V+ +++ +G + + V MP +V++W +LI+G QNG + + + M
Sbjct: 89 DIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVFLKM 148
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
R +G D T + CS L G QIH V+ G DV S+L+ MY++C L
Sbjct: 149 RDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNSL 208
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
+DS+ F E + + WS+ IA + + + LF++M++K + T+ S+ +C
Sbjct: 209 EDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVFRSC 268
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
+ G + +K + T +D+ +C + +A L +P
Sbjct: 269 AGLSASRLGTQLHCHALKTDFGSDVIVG-TATLDMYAKCDNMSDAYKLFSLLP 320
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 87/210 (41%), Gaps = 34/210 (16%)
Query: 74 TFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLE- 132
TF + CS L G++ HA ++ +G + V V + LI MY +C L+ + K F E
Sbjct: 26 TFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEM 85
Query: 133 --------------C-----------------EYSDVVLWSSMIAAYGFHGKGEEAINLF 161
C + DVV W+S+I+ Y +G +++I +F
Sbjct: 86 PQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVF 145
Query: 162 EQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGR 221
+M + T L CS + G++ + V+ + + +VD+ +
Sbjct: 146 LKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTG-SALVDMYAK 204
Query: 222 CGYLDEAAALIRNMPVKANAIIWKTLLSAC 251
C L+++ + +P K N I W ++ C
Sbjct: 205 CNSLEDSLDVFSELPDK-NWISWSAAIAGC 233
>gi|302780547|ref|XP_002972048.1| hypothetical protein SELMODRAFT_96927 [Selaginella moellendorffii]
gi|300160347|gb|EFJ26965.1| hypothetical protein SELMODRAFT_96927 [Selaginella moellendorffii]
Length = 606
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 156/446 (34%), Positives = 253/446 (56%), Gaps = 25/446 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D V +SL +MY + G + + E+ MP R+ ++W T++AG+ Q G L+ +M
Sbjct: 166 DPVVANSLLNMYRRCGGMDDFERAFWAMPSRDEVSWTTMLAGRIQCGREASALELLRVMD 225
Query: 65 MVGFR-PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
GFR +TF +++ +C L+ + QG+ +H ++ +G +DV + ++L++MY++CG +
Sbjct: 226 QDGFRITSALTFATLVDACGNLSAIAQGRHLHDRIITSGVCIDVVLHTALLNMYAKCGRV 285
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
D++ + F + + + +SSM+AAY +G +A+ LF MEQ ++ + VTF +LYAC
Sbjct: 286 DEARELFDQTLEPNNITFSSMVAAYARNGHFGDALKLFWSMEQDGYKPDSVTFTHVLYAC 345
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
SH G ++ +F + EH+ C VDLL R G+L +A + MP+ +++
Sbjct: 346 SHGGFVDQAWHYFTTLEPDRGIPLVAEHFGCAVDLLARAGWLADAEKFLNRMPIPPDSVS 405
Query: 244 WKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
W +LL AC+ H++ ++ R AE + + P A PY LLSNI++ A +W ++ ++ MR+
Sbjct: 406 WMSLLQACRIHRNVEIGARAAEHVFRLAPHRAGPYSLLSNIYSDAGKWDMAAKVQKLMRD 465
Query: 304 RNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHD 363
R +KK G SW+EI + +F +GD HP ++I ++ ++ MK GYVPDT +HD
Sbjct: 466 RGIKKPGGRSWIEINGKTSEFIVGDSWHPDLVQICQEIQRVSKVMKEHGYVPDTKQVLHD 525
Query: 364 MDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPFKYISEIKN------------------ 405
+ EEKE L HSEKLAI GLI P IS +KN
Sbjct: 526 AEEEEKEDILYFHSEKLAIGL-----GLIKTPPKTTISIVKNIRVCPDCHTAAKVISKVT 580
Query: 406 -REIIVRDASRFHHFRNGKCSCGDYW 430
R+I++RD + FHH +G CSC DYW
Sbjct: 581 ERKIVIRDINLFHHMEDGNCSCRDYW 606
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 113/242 (46%), Gaps = 3/242 (1%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+ L Y + G + V P NV +W+ LI+ +N L Y M++ G
Sbjct: 70 NKLVQAYGQCGDVESAHAVFARQPDPNVFSWMMLISACLRNARPRAALGHYRAMQLRGCH 129
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
PD ++ + ++ A L G+ I A + D V +SL++MY RCG +DD +
Sbjct: 130 PDAHVVSAIFCAVADTANLELGRSITAPLASTAMLHDPVVANSLLNMYRRCGGMDDFERA 189
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFE-ANDVTFVSLLYACSHCGL 188
F D V W++M+A G+ A+ L M+Q F + +TF +L+ AC +
Sbjct: 190 FWAMPSRDEVSWTTMLAGRIQCGREASALELLRVMDQDGFRITSALTFATLVDACGNLSA 249
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
+G D ++ + H T ++++ +CG +DEA L + ++ N I + +++
Sbjct: 250 IAQGRHLHDRIITSGVCIDVVLH-TALLNMYAKCGRVDEARELF-DQTLEPNNITFSSMV 307
Query: 249 SA 250
+A
Sbjct: 308 AA 309
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 2/153 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +D+V ++L +MY K G + E ++ N I + +++A A+NG D L +
Sbjct: 264 GVCIDVVLHTALLNMYAKCGRVDEARELFDQTLEPNNITFSSMVAAYARNGHFGDALKLF 323
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEV-VKAGASLDVGVISSLISMYSR 119
M G++PD +TF V+ +CS + Q + G L + + +R
Sbjct: 324 WSMEQDGYKPDSVTFTHVLYACSHGGFVDQAWHYFTTLEPDRGIPLVAEHFGCAVDLLAR 383
Query: 120 CGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFH 151
G L D+ K D V W S++ A H
Sbjct: 384 AGWLADAEKFLNRMPIPPDSVSWMSLLQACRIH 416
>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 874
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 161/432 (37%), Positives = 249/432 (57%), Gaps = 14/432 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+++ +S+ + + + K MP R+ ++W +I G + ++VL + M+
Sbjct: 305 DVISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQ 364
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
M +PD+ T VS++++C+ L L G+ + K D + ++LI MY +CG ++
Sbjct: 365 MSNVKPDEFTMVSILTACAHLGALELGEWAKTYIDKNKIKNDTFIGNALIDMYFKCGNVE 424
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ K F E + D W++MI +G GEEA+ +F M + +++T++ ++ AC+
Sbjct: 425 KAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEALTMFSYMLEASVTPDEITYIGVMCACT 484
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL KG FF M ++ KP L HY C+VDLLGR G+L EA +I NMPVK N+I+W
Sbjct: 485 HVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHLKEALEVIMNMPVKPNSIVW 544
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
+LL AC+ HK+ +A A EIL + P++ A YVLL NI+A+ K+W+ + R+ M ER
Sbjct: 545 GSLLGACRVHKNVQLAEMAANEILELEPENGAVYVLLCNIYAACKKWKNLHNVRKMMMER 604
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
+KK PG S +E+ V++F GDKSHP+S EI LE + ++ GY PDT D+
Sbjct: 605 GIKKIPGCSLMEMNGIVYEFVAGDKSHPQSKEIYAKLENMKQDLSNAGYSPDTSEVFLDV 664
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPF--------------KYISEIKNREIIV 410
E+KE L HSEKLAIA+A + G V + +S++ NRE+IV
Sbjct: 665 GEEDKETALYMHSEKLAIAYALISSGKGVTIRIVKNLRMCVDCHHMAMVVSKVYNRELIV 724
Query: 411 RDASRFHHFRNG 422
RD +RFHHFR+G
Sbjct: 725 RDKTRFHHFRHG 736
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 136/296 (45%), Gaps = 9/296 (3%)
Query: 18 KSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVS 77
+SG + KV +P +V W T+I G ++ +E + Y LM + +PD TF
Sbjct: 81 ESGDVYYARKVFDEIPQPSVFIWNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFPF 140
Query: 78 VISSCSELATLGQGQQI--HAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
++ ++ L G+ + HA V+ ++ V I ++S CG ++ + K F +
Sbjct: 141 LLKGFTKDMALKYGKVLLNHA-VIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDG 199
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQK--EFEANDVTFVSLLYACSHCGLKEKGM 193
+VV W+ +++ Y + EE+ LF +ME+K N VT V +L ACS G
Sbjct: 200 WEVVTWNVVLSGYNRFKRYEESKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGK 259
Query: 194 EFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKT 253
++ +K+ +P L ++D+ CG +D A + M + + I W ++++
Sbjct: 260 CIYNKYIKEGIVEPNLILENALIDMFASCGEMDAARGVFDEMKTR-DVISWTSIVTGFAN 318
Query: 254 HKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKE 309
D+A + +++ +D + + + + R++ V M+ NVK +
Sbjct: 319 TCRIDLARKYFDQM---PERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPD 371
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 119/278 (42%), Gaps = 36/278 (12%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM- 63
+L H++ G + K+ + V+ W +++G + E+ + M
Sbjct: 170 NLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFKRYEESKRLFIEME 229
Query: 64 -RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAG-ASLDVGVISSLISMYSRCG 121
+ P+ +T V ++S+CS+L L G+ I+ + +K G ++ + ++LI M++ CG
Sbjct: 230 KKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFASCG 289
Query: 122 CLDDSVKTFLECEYSDVVLWSS-------------------------------MIAAYGF 150
+D + F E + DV+ W+S MI Y
Sbjct: 290 EMDAARGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDGYLR 349
Query: 151 HGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLE 210
+ +E + LF M+ + ++ T VS+L AC+H G E G E+ + K + K
Sbjct: 350 MNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELG-EWAKTYIDKNKIKNDTF 408
Query: 211 HYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
++D+ +CG +++A + M K + W ++
Sbjct: 409 IGNALIDMYFKCGNVEKAKKIFNEMQ-KKDKFTWTAMI 445
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 87/227 (38%), Gaps = 7/227 (3%)
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISM--YSR 119
L RM+ P S IS T+ + QIH++ +K G S + ++ +I
Sbjct: 22 LKRMISNTPLHSFVKSPISLLETCNTMYEINQIHSQTIKTGLSSNHLFLTKVIIFCCTKE 81
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G + + K F E V +W++MI Y E ++L++ M + + TF L
Sbjct: 82 SGDVYYARKVFDEIPQPSVFIWNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFPFL 141
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L + + G + V L + L CG ++ A I +M
Sbjct: 142 LKGFTKDMALKYGKVLLNHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYARK-IFDMGDGW 200
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILG----VNPQDAAPYVLLS 282
+ W +LS K + + R+ E+ V+P ++LS
Sbjct: 201 EVVTWNVVLSGYNRFKRYEESKRLFIEMEKKCECVSPNSVTLVLMLS 247
>gi|242096366|ref|XP_002438673.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
gi|241916896|gb|EER90040.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
Length = 588
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 161/443 (36%), Positives = 260/443 (58%), Gaps = 15/443 (3%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
FEL + GSSL MY KS ++ E +V ++P R+V+++ +++G Q GL E+ LD +
Sbjct: 147 FELHMFVGSSLLDMYAKSENIQEARRVFDMLPARDVVSYTAILSGYTQLGLDEEALDLFR 206
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
L+ G + +++TF +++++ S L+++ G+Q+H +++ + + +SLI MYS+CG
Sbjct: 207 LLYNEGMQCNQVTFTALLNALSGLSSMDYGKQVHGLILRRELPFFMALQNSLIDMYSKCG 266
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
L S + F VV W++M+ YG HG E + LF M E + + VT +++L
Sbjct: 267 KLLYSRRVFDSMPERSVVSWNAMLMGYGRHGLAHEVVQLFRSM-CDEVKPDSVTLLAVLS 325
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
SH GL ++G++ FD +VK+ EHY CV+DLLGR G L +A LI MP +
Sbjct: 326 GYSHGGLVDEGLDMFDHIVKEQSTLLNTEHYGCVIDLLGRSGQLQKALNLIEKMPFQPTR 385
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
IW +LL AC+ H + + +A+++L + P++A YV+LSNI+A+A W+ V R+ M
Sbjct: 386 AIWGSLLGACRVHTNVHVGEFVAQKLLDIEPENAGNYVILSNIYAAAGMWKDVFRVRKLM 445
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
++ V KEPG SW+ + +H F ++ HPR +I+ ++E+ +K G+VPD +
Sbjct: 446 LKKTVIKEPGRSWMILDKVIHTFHSCERFHPRKEDINAKIKEIYVAIKAAGFVPDLSCVL 505
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFA-------------EHTRGLIVMLPF-KYISEIKNRE 407
HD+D E+KE L HSEKLAI F ++ R + F K++S++ RE
Sbjct: 506 HDVDDEQKERMLLGHSEKLAITFGLMSTPSDLTIQVMKNLRICVDCHNFAKFVSKVYGRE 565
Query: 408 IIVRDASRFHHFRNGKCSCGDYW 430
I +RD +RFH G C+CGDYW
Sbjct: 566 ISLRDKNRFHLITEGACTCGDYW 588
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 123/257 (47%), Gaps = 28/257 (10%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ L + L MY + G+L + V+ MP RNV++W +I+G +QN
Sbjct: 65 GYRPALYLATRLVIMYARCGALEDARNVLDGMPERNVVSWTAMISGYSQNE--------- 115
Query: 61 NLMRMVGFRPDKI--TFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
RPD+ F+ ++ A + Q +Q+HA VK L + V SSL+ MY+
Sbjct: 116 --------RPDQAWELFIMMLR-----AGIHQVKQVHAFAVKTNFELHMFVGSSLLDMYA 162
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+ + ++ + F DVV ++++++ Y G EEA++LF + + + N VTF +
Sbjct: 163 KSENIQEARRVFDMLPARDVVSYTAILSGYTQLGLDEEALDLFRLLYNEGMQCNQVTFTA 222
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKP-RLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
LL A S + G + L+++ R P + ++D+ +CG L + + +MP
Sbjct: 223 LLNALSGLSSMDYGKQVHGLILR--RELPFFMALQNSLIDMYSKCGKLLYSRRVFDSMPE 280
Query: 238 KANAIIWKTLLSACKTH 254
++ + W +L H
Sbjct: 281 RS-VVSWNAMLMGYGRH 296
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 142/336 (42%), Gaps = 59/336 (17%)
Query: 79 ISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDV 138
I+ C E L +G+Q+HA +V AG + + + L+ MY+RCG L+D+ +V
Sbjct: 42 ITECVERRALREGRQVHARMVAAGYRPALYLATRLVIMYARCGALEDARNVLDGMPERNV 101
Query: 139 VLWSSMIAAYGFHGKGEEAINLF--------EQMEQ-------KEFEANDVTFVSLLYAC 183
V W++MI+ Y + + ++A LF Q++Q FE + SLL
Sbjct: 102 VSWTAMISGYSQNERPDQAWELFIMMLRAGIHQVKQVHAFAVKTNFELHMFVGSSLLDMY 161
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIR---NMPVKAN 240
+ ++ FD++ + + YT ++ + G +EA L R N ++ N
Sbjct: 162 AKSENIQEARRVFDMLPAR-----DVVSYTAILSGYTQLGLDEEALDLFRLLYNEGMQCN 216
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVL-----LSNIHASAKRWQGVS 295
+ + LL+A S D +++ G+ + P+ + L ++++ +
Sbjct: 217 QVTFTALLNALSGLSSMD----YGKQVHGLILRRELPFFMALQNSLIDMYSKCGKLLYSR 272
Query: 296 EFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMK------ 349
++M ER+V VSW + MG H + E+ + E+K
Sbjct: 273 RVFDSMPERSV-----VSW-------NAMLMGYGRHGLAHEVVQLFRSMCDEVKPDSVTL 320
Query: 350 ---LRGY----VPDTGADMHDMDSEEKE--YNLKHH 376
L GY + D G DM D +E+ N +H+
Sbjct: 321 LAVLSGYSHGGLVDEGLDMFDHIVKEQSTLLNTEHY 356
>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 755
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 168/462 (36%), Positives = 261/462 (56%), Gaps = 39/462 (8%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQN-GLAED---- 55
G+ ++ +S+ ++Y+K G L+E +K+ M N++ W +IAG A+ LAED
Sbjct: 296 GYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAA 355
Query: 56 ------VLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV 109
L + + G +PD TF SV+S CS L L QG+QIH +++K+G DV V
Sbjct: 356 HKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVV 415
Query: 110 ISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEF 169
++L+SMY++CG +D + K FLE ++ W+SMI + HG ++A+ LFE M
Sbjct: 416 GTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGI 475
Query: 170 EANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAA 229
+ N VTFV +L ACSH GL ++ + +F+LM K+Y KP ++H+ C++D+ R G ++EA
Sbjct: 476 KPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAF 535
Query: 230 ALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAK 289
++ M + N IW L++ C++H +D+ AE++L + P+D YV L N+H SA
Sbjct: 536 DVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMHISAG 595
Query: 290 RWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMK 349
RW+ VS+ R+ M+E V K SW+ IK +V+ F DKSH +S+E+ LE + +E+K
Sbjct: 596 RWKDVSKVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQSLEMYKLLETVLNEVK 655
Query: 350 LRGYVP--DTGADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP----------- 396
GY P D + + E + HSEKLAIAF ++ LP
Sbjct: 656 ALGYEPIEDVEVIEKEENEERVLSSTVLHSEKLAIAFG------LLNLPTATPIRVVKSI 709
Query: 397 ---------FKYISEIKNREIIVRDASRFHHFRNGKCSCGDY 429
++IS +K REI++RD+ + H F NG CSCG Y
Sbjct: 710 TMCRDCHNFIRFISLLKGREIVIRDSKQLHKFLNGYCSCGGY 751
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 153/318 (48%), Gaps = 15/318 (4%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
+ D G+SL+ Y K L K +++ ++VI+W ++I+ NG A L +
Sbjct: 197 DFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMD 256
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M G +P++ T SV+S+C + TL G QIH+ +K G + + +S++ +Y +CG
Sbjct: 257 MLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGW 316
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAY-----------GFHGKGEEAINLFEQMEQKEFEA 171
L ++ K F E ++V W++MIA + H G A+ +F+++ + +
Sbjct: 317 LIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKP 376
Query: 172 NDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAAL 231
+ TF S+L CS+ E+G + ++K + T +V + +CG +D+A+
Sbjct: 377 DLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVG-TALVSMYNKCGSIDKASKA 435
Query: 232 IRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEE--ILGVNPQDAAPYVLLSNIHASAK 289
MP + I W ++++ H + A ++ E+ ++G+ P +LS +
Sbjct: 436 FLEMPSR-TMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGL 494
Query: 290 RWQGVSEFREAMRERNVK 307
+ + F ++ N+K
Sbjct: 495 ADEALYYFELMQKQYNIK 512
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 122/251 (48%), Gaps = 4/251 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF DL + L ++Y K G + KV +P RNV AW TL+ G QN L +
Sbjct: 94 GFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLF 153
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G P T V+++CS L ++ G+Q+HA ++K D + +SL S YS+
Sbjct: 154 IKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKF 213
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
L+ ++K F + DV+ W+S+I++ +G+ +++ F M + N+ T S+L
Sbjct: 214 RRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVL 273
Query: 181 YACSHCGLKEKGMEFFDLMVK-KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
AC + G + L +K Y +++ ++ L +CG+L EA L M
Sbjct: 274 SACCVMLTLDLGAQIHSLSIKLGYGSSILIKN--SIMYLYLKCGWLIEAQKLFEGMET-L 330
Query: 240 NAIIWKTLLSA 250
N + W +++
Sbjct: 331 NLVTWNAMIAG 341
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 89/193 (46%), Gaps = 16/193 (8%)
Query: 66 VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD 125
+G R + + ++ C + + + IH +VK G D+ V++ L+++YS+CG ++
Sbjct: 58 LGTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMES 117
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
+ K F +V W++++ Y + A+ LF +M + ++ T +L ACS
Sbjct: 118 AHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSS 177
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLG-------RCGYLDEAAALIRNMPVK 238
E G + V Y K ++ T + + L R + +A +I+ +
Sbjct: 178 LQSIEFGKQ-----VHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIK----E 228
Query: 239 ANAIIWKTLLSAC 251
+ I W +++S+C
Sbjct: 229 KDVISWTSVISSC 241
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 160/448 (35%), Positives = 250/448 (55%), Gaps = 46/448 (10%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E +L ++L MY K GS+ V M ++++I+W T+I
Sbjct: 384 ESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMIGE---------------- 427
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
+PD T ++ +C+ L+ L +G++IH +++ G S D V ++L+ +Y +CG
Sbjct: 428 -----LKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGV 482
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
L + F D+V W+ MI+ YG HG G EAI F +M E ++V+F+S+LYA
Sbjct: 483 LGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYA 542
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
CSH GL E+G FF +M + +P+LEHY C+VDLL R G L +A I +P+ +A
Sbjct: 543 CSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDAT 602
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMR 302
IW LL C+ + ++A ++AE + + P++ YVLL+NI+A A++W+ V RE +
Sbjct: 603 IWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIG 662
Query: 303 ERNVKKEPGVSWLEIKNQVHQFTMGDK-SHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
++ ++K PG SW+EIK +V+ F G+ SHP S +I+ L+++ +MK GY P T +
Sbjct: 663 KKGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYAL 722
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPFKYISEIKN---------------- 405
+ D +KE L HSEKLA+AF GL+ + P K + KN
Sbjct: 723 INADEMQKEMALCGHSEKLAMAF-----GLLALPPRKTVRVTKNLRVCGDCHEMAKFMSK 777
Query: 406 ---REIIVRDASRFHHFRNGKCSCGDYW 430
REI++RD++RFHHF+NG CSC +W
Sbjct: 778 ETRREIVLRDSNRFHHFKNGYCSCRGFW 805
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 121/223 (54%), Gaps = 2/223 (0%)
Query: 35 RNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQI 94
R+VI+W ++I+G NGL E L+ Y M +G D T +SV+ C+ TL G+ +
Sbjct: 214 RDVISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAV 273
Query: 95 HAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKG 154
H+ +K+ + ++L+ MYS+CG LD +++ F + +VV W+SMIA Y G+
Sbjct: 274 HSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRS 333
Query: 155 EEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC 214
+ AI L +QME++ + + V S+L+AC+ G + G + D +K + L
Sbjct: 334 DGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDY-IKANNMESNLFVCNA 392
Query: 215 VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKST 257
++D+ +CG +D A ++ M VK + I W T++ K T
Sbjct: 393 LMDMYTKCGSMDGANSVFSTMVVK-DIISWNTMIGELKPDSRT 434
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 125/294 (42%), Gaps = 25/294 (8%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
FE + ++L MY K G L +V M RNV++W ++IAG ++G ++ +
Sbjct: 282 FERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQ 341
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M G + D + S++ +C+ +L G+ +H + ++ V ++L+ MY++CG
Sbjct: 342 QMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCG 401
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+D + F D++ W++MI E + + T +L
Sbjct: 402 SMDGANSVFSTMVVKDIISWNTMIG---------------------ELKPDSRTMACILP 440
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
AC+ E+G E +++ R +VDL +CG L A L +P K +
Sbjct: 441 ACASLSALERGKEIHGYILRNGYSSDR-HVANALVDLYVKCGVLGLARLLFDMIPSK-DL 498
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLSNIHASAKRWQG 293
+ W ++S H + A E+ G+ P + + +L S QG
Sbjct: 499 VSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQG 552
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 88/174 (50%), Gaps = 10/174 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ D ++L +Y+K G L + ++P +++++W +I+G +G + + +
Sbjct: 462 GYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATF 521
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV--ISSLISMYS 118
N MR G PD+++F+S++ +CS L QG + ++K +++ + + ++ + S
Sbjct: 522 NEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFY-IMKNDFNIEPKLEHYACMVDLLS 580
Query: 119 RCGCLDDSVKTFLECE--YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFE 170
R G L + + F+E D +W +++ + I L E++ ++ FE
Sbjct: 581 RTGNLSKAYE-FIETLPIAPDATIWGALLCGCRIY----HDIELAEKVAERVFE 629
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 101/245 (41%), Gaps = 53/245 (21%)
Query: 74 TFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK----- 128
T+ SV+ C+ +L G+++H+ + ++D + L+S+Y+ CG L + +
Sbjct: 101 TYSSVLQLCAGSKSLTDGKKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTM 160
Query: 129 --------TFLECEYS--------------------------------------DVVLWS 142
F+ EY+ DV+ W+
Sbjct: 161 EKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWN 220
Query: 143 SMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKK 202
SMI+ Y +G E + +++QM + + T +S+L C++ G G L +K
Sbjct: 221 SMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKS 280
Query: 203 YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGR 262
+ R+ ++D+ +CG LD A + M + N + W ++++ +D A R
Sbjct: 281 TFER-RINFSNTLLDMYSKCGDLDGALRVFEKMGER-NVVSWTSMIAGYTRDGRSDGAIR 338
Query: 263 IAEEI 267
+ +++
Sbjct: 339 LLQQM 343
>gi|224111152|ref|XP_002315764.1| predicted protein [Populus trichocarpa]
gi|222864804|gb|EEF01935.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 157/440 (35%), Positives = 256/440 (58%), Gaps = 14/440 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
+LV +++ Y + G + + + M ++++ W +I+G A++ ++ L+ ++ M+
Sbjct: 13 NLVVLTAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYAESDKPQEALNLFSEMQ 72
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+ G +PD++T +SVIS+C+ L L + + IH V K G + V ++LI MY++CG L
Sbjct: 73 VFGIKPDQVTILSVISACARLGVLDRAKWIHMYVDKNGLGGALPVNNALIDMYAKCGNLG 132
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ F + + +V+ W+SMI A+ HG A+ F QM+ + + N VTFV +LYACS
Sbjct: 133 AARGVFEKMQSRNVISWTSMINAFAIHGDASNALKFFYQMKDENIKPNGVTFVGVLYACS 192
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL E+G F M ++ P+ EHY C+VDL GR L +A L+ MP+ N +IW
Sbjct: 193 HAGLVEEGRRTFASMTNEHNITPKHEHYGCMVDLFGRANLLRDALELVETMPLAPNVVIW 252
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
+L++AC+ H ++ A+++L + P V LSNI+A +RWQ V E R M++R
Sbjct: 253 GSLMAACQIHGENELGEFAAKQVLELEPDHDGALVQLSNIYAKDRRWQDVGELRNLMKQR 312
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
+ KE G S +E+ NQV++F M DK H ++ +I L+E+ E+KL GY P+T + + D+
Sbjct: 313 GISKERGCSRIELNNQVYEFVMADKKHKQADKIYEKLDEVVKELKLVGYTPNTRSVLVDV 372
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRG------LIVMLP--------FKYISEIKNREIIV 410
+ E K+ + HSEKLA+ + G ++ L K +S++ EIIV
Sbjct: 373 EEEGKKEVVLWHSEKLALCYGLMGEGKGSCIRIVKNLRVCEDCHTFIKLVSKVYGMEIIV 432
Query: 411 RDASRFHHFRNGKCSCGDYW 430
RD +RFHH++ G CSC DYW
Sbjct: 433 RDRTRFHHYKAGVCSCNDYW 452
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 85/152 (55%), Gaps = 2/152 (1%)
Query: 103 ASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFE 162
+S ++ V++++IS YSR G ++D+ F + E D+V WS+MI+ Y K +EA+NLF
Sbjct: 10 SSRNLVVLTAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYAESDKPQEALNLFS 69
Query: 163 QMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRC 222
+M+ + + VT +S++ AC+ G+ ++ ++ + V K L ++D+ +C
Sbjct: 70 EMQVFGIKPDQVTILSVISACARLGVLDRA-KWIHMYVDKNGLGGALPVNNALIDMYAKC 128
Query: 223 GYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
G L A + M + N I W ++++A H
Sbjct: 129 GNLGAARGVFEKMQSR-NVISWTSMINAFAIH 159
>gi|15227067|ref|NP_178398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546779|sp|Q8LK93.2|PP145_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g02980
gi|3461822|gb|AAC32916.1| hypothetical protein [Arabidopsis thaliana]
gi|330250557|gb|AEC05651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 603
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 160/450 (35%), Positives = 256/450 (56%), Gaps = 25/450 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + ++ +L +MY + + V + V+ + +I G A+ + L +
Sbjct: 159 GLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLF 218
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ +P++IT +SV+SSC+ L +L G+ IH K V V ++LI M+++C
Sbjct: 219 REMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKC 278
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G LDD+V F + Y D WS+MI AY HGK E+++ +FE+M + + +++TF+ LL
Sbjct: 279 GSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLL 338
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH G E+G ++F MV K+ P ++HY +VDLL R G L++A I +P+
Sbjct: 339 NACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPT 398
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
++W+ LL+AC +H + D+A +++E I ++ YV+LSN++A K+W+ V R+
Sbjct: 399 PMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKV 458
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M++R K PG S +E+ N VH+F GD + ++ L+E+ E+KL GYVPDT
Sbjct: 459 MKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMV 518
Query: 361 MH-DMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPFKYISEIKN-------------- 405
+H +M+ +EKE L++HSEKLAI F GL+ P I +KN
Sbjct: 519 VHANMNDQEKEITLRYHSEKLAITF-----GLLNTPPGTTIRVVKNLRVCRDCHNAAKLI 573
Query: 406 -----REIIVRDASRFHHFRNGKCSCGDYW 430
R++++RD RFHHF +GKCSCGD+W
Sbjct: 574 SLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 116/241 (48%), Gaps = 16/241 (6%)
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
G PD TF S++ +C+ L +G+Q+H +K G +V V +LI+MY+ C +D +
Sbjct: 124 GILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSA 183
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHC 186
F VV +++MI Y + EA++LF +M+ K + N++T +S+L +C+
Sbjct: 184 RCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALL 243
Query: 187 GLKEKGMEFFDLMVKKYRRKPRLEHY----TCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
G + G + KY +K Y T ++D+ +CG LD+A ++ M K +
Sbjct: 244 GSLDLGK-----WIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYK-DTQ 297
Query: 243 IWKTLLSACKTH----KSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
W ++ A H KS M R+ E V P + LL+ + + +G F
Sbjct: 298 AWSAMIVAYANHGKAEKSMLMFERMRSE--NVQPDEITFLGLLNACSHTGRVEEGRKYFS 355
Query: 299 E 299
+
Sbjct: 356 Q 356
Score = 38.5 bits (88), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 87/224 (38%), Gaps = 40/224 (17%)
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC---GCLDDSVKTFLE 132
+ +IS C+ L L QI A +K+ DV ++ LI+ + + + F
Sbjct: 33 ILLISKCNSLREL---MQIQAYAIKSHIE-DVSFVAKLINFCTESPTESSMSYARHLFEA 88
Query: 133 CEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKG 192
D+V+++SM Y E +LF ++ + ++ TF SLL AC+ E+G
Sbjct: 89 MSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEG 148
Query: 193 MEFFDL---------------MVKKYRRKPRLEHYTCVVDLL---------------GRC 222
+ L ++ Y ++ CV D + R
Sbjct: 149 RQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARR 208
Query: 223 GYLDEAAALIRNMP---VKANAIIWKTLLSACKTHKSTDMAGRI 263
+EA +L R M +K N I ++LS+C S D+ I
Sbjct: 209 NRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWI 252
>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130 [Vitis vinifera]
gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 165/450 (36%), Positives = 259/450 (57%), Gaps = 20/450 (4%)
Query: 1 GFELDL--VAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLD 58
GF + + + S++ +Y K G L E +KV + +N+I+W LI G AQ G + +D
Sbjct: 236 GFPISIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMD 295
Query: 59 QYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
+ +R D ++ ++LA + QG+Q+H ++K + LD+ V +S+I MY
Sbjct: 296 LFRQLRESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYL 355
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+CG +++ + F E + +VV W+ MI YG HG GE+AI+LF +M+ E ++V +++
Sbjct: 356 KCGLTEEAERLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLA 415
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
LL ACSH GL + E+F + ++ KP +EHY C+VD+LGR G L EA LI NM +K
Sbjct: 416 LLSACSHSGLIRESQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKEAKNLIENMKLK 475
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
N IW+TLLSAC+ H + ++ + E + ++ + YV++SNI+A A W+ R
Sbjct: 476 PNEGIWQTLLSACRVHGNLEIGREVGEILFRMDTDNPVNYVMMSNIYAEAGYWKECERVR 535
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLR-GYVPDT 357
+ ++ + +KKE G SW+EI ++H F GD +HP + +I L+E+ +K GY
Sbjct: 536 KLVKAKGLKKEAGQSWVEINKEIHFFYGGDDTHPLTEKIHEMLKEMERRVKEEVGYAYGL 595
Query: 358 GADMHDMDSEEKEYNLKHHSEKLAIAFA------EHTRGLIVMLP-----------FKYI 400
+HD++ E KE NL+ HSEKLAI A E G+I + K +
Sbjct: 596 RFALHDVEEESKEENLRVHSEKLAIGLALVCDGMEKKGGVIRVFKNLRVCGDCHEFIKGL 655
Query: 401 SEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
S+I + +VRDA+RFH F +G CSCGDYW
Sbjct: 656 SKILKKVFVVRDANRFHRFEDGLCSCGDYW 685
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 123/251 (49%), Gaps = 2/251 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF DL+ + L MY K + V M RNV++W L+ G Q G A+ L
Sbjct: 34 GFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLERNVVSWTALMCGYLQEGNAKGSLALL 93
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G +P++ TF + + +C L + G QIH VK+G V ++ I MYS+C
Sbjct: 94 CEMGYSGVKPNEFTFSTSLKACGALGVVENGMQIHGMCVKSGFEWVSVVGNATIDMYSKC 153
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + + F + + ++V W++MIA + G G +++ LF++M+ + ++ TF S L
Sbjct: 154 GRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQGEVPDEFTFTSTL 213
Query: 181 YACSHCGLKEKGMEFF-DLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
AC G G + L+ + + R + +VDL +CGYL EA + + K
Sbjct: 214 KACGALGAIRGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQK- 272
Query: 240 NAIIWKTLLSA 250
N I W L+
Sbjct: 273 NLISWSALIQG 283
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 88/192 (45%), Gaps = 11/192 (5%)
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
++ ++ +CS+ QG Q+HA V G D+ + + LI MY +C +D +
Sbjct: 2 SERQRLAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSV 61
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F +VV W++++ Y G + ++ L +M + N+ TF + L AC G+
Sbjct: 62 FDRMLERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVV 121
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCV----VDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
E GM+ + V K E + V +D+ +CG + A + MP + N + W
Sbjct: 122 ENGMQIHGMCV-----KSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFR-NLVSWN 175
Query: 246 TLLSACKTHKST 257
+++ TH+
Sbjct: 176 AMIAG-HTHEGN 186
>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 158/409 (38%), Positives = 241/409 (58%), Gaps = 14/409 (3%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
N +W +I G QNG E L+ + M+ GF+P++IT SV+ +C+ L +L G+QIH
Sbjct: 279 NYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIH 338
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGE 155
+ + D+ ++L+ MY++CG L+ S + F D V W++MI A HG GE
Sbjct: 339 GYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNGE 398
Query: 156 EAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV 215
EA+ LF +M N VTF +L CSH L ++G+ FD M + + +P +H++C+
Sbjct: 399 EALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGLLIFDSMSRDHSVEPDADHHSCM 458
Query: 216 VDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDA 275
VD+L R G L+EA I+ MP++ A W LL C+ +K+ ++ A + + +
Sbjct: 459 VDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGGCRVYKNVELGRIAANRLFEIESDNP 518
Query: 276 APYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSM 335
YVLLSNI SAK W SE R+ MR+R V K PG SW++++N+VH F +GDKS+ +S
Sbjct: 519 GNYVLLSNILVSAKLWSEASETRKLMRDRGVTKNPGCSWIQVRNRVHTFVVGDKSNDQSD 578
Query: 336 EIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAF------AEHTR 389
EI +L+ + +M++ GY+P+T + D+D EEKE L +HSEKLA+AF E +
Sbjct: 579 EIYRFLDYMGEKMRIAGYLPNTDFVLQDVDQEEKEEVLCNHSEKLAVAFGVLNLNGESSI 638
Query: 390 GLIVML--------PFKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+ L K++++I +IIVRD+ RFHHFR+G CSC D+W
Sbjct: 639 RVFKNLRICGDCHNAIKFMAKIVGVKIIVRDSLRFHHFRDGLCSCQDFW 687
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 154/346 (44%), Gaps = 39/346 (11%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D++ G++L MY K V MP R+VI+W ++ + GL + L +
Sbjct: 108 GFCSDVLLGNALIDMYGKCRCSEGARLVFEGMPFRDVISWTSMASCYVNCGLLREALGAF 167
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M + G RP+ +T S++ +C++L L G+++H VV+ G +V V S+L++MY+ C
Sbjct: 168 RKMGLNGERPNSVTVSSILPACTDLKDLKSGREVHGFVVRNGMGGNVFVSSALVNMYASC 227
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGF------------------------------ 150
+ + F D V W+ +I AY
Sbjct: 228 LSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVI 287
Query: 151 -----HGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRR 205
+G+ E+A+ + +M+ F+ N +T S+L AC++ G + + + +
Sbjct: 288 GGCMQNGRTEKALEVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFF 347
Query: 206 KPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAE 265
+ L T +V + +CG L E + + +M K + + W T++ A H + + A +
Sbjct: 348 QD-LTTTTALVFMYAKCGDL-ELSRRVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFR 405
Query: 266 EIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKE 309
E++ GV P +LS S +G+ F R+ +V+ +
Sbjct: 406 EMVDSGVRPNSVTFTGVLSGCSHSRLVDEGLLIFDSMSRDHSVEPD 451
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 122/262 (46%), Gaps = 7/262 (2%)
Query: 15 MYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVG-FRPDKI 73
+Y SG L + +P ++ W LI+ ++G + + + YN R PDK+
Sbjct: 20 VYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEPDKL 79
Query: 74 TFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLEC 133
+SV +C+ L + +++H + ++ G DV + ++LI MY +C C + + F
Sbjct: 80 LLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVFEGM 139
Query: 134 EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGM 193
+ DV+ W+SM + Y G EA+ F +M N VT S+L AC+ + G
Sbjct: 140 PFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLKSGR 199
Query: 194 EFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSAC-- 251
E +V+ + + +V++ C + +A + +M + + + W L++A
Sbjct: 200 EVHGFVVRN-GMGGNVFVSSALVNMYASCLSIRQAQLVFDSMS-RRDTVSWNVLITAYFL 257
Query: 252 --KTHKSTDMAGRIAEEILGVN 271
+ K + GR+ E +G+N
Sbjct: 258 NKECEKGLSVFGRMMSEGVGLN 279
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 1/126 (0%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F DL ++L MY K G L +V +M R+ ++W T+I + +G E+ L +
Sbjct: 346 FFQDLTTTTALVFMYAKCGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFR 405
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSRC 120
M G RP+ +TF V+S CS + +G I + + D S ++ + SR
Sbjct: 406 EMVDSGVRPNSVTFTGVLSGCSHSRLVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRA 465
Query: 121 GCLDDS 126
G L+++
Sbjct: 466 GRLEEA 471
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 64/159 (40%), Gaps = 19/159 (11%)
Query: 100 KAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAIN 159
K SL + I +YS G L + F + D+ W+ +I+A HG+ EAI
Sbjct: 4 KLPTSLPPHLALKFIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQ 63
Query: 160 LFEQMEQKE-FEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC---- 214
+ K E + + +S+ AC+ D+M K + + C
Sbjct: 64 YYNDFRHKNCVEPDKLLLLSVAKACA---------SLRDVMNAKRVHEDAIRFGFCSDVL 114
Query: 215 ----VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
++D+ G+C + A + MP + + I W ++ S
Sbjct: 115 LGNALIDMYGKCRCSEGARLVFEGMPFR-DVISWTSMAS 152
>gi|302818616|ref|XP_002990981.1| hypothetical protein SELMODRAFT_132724 [Selaginella moellendorffii]
gi|300141312|gb|EFJ08025.1| hypothetical protein SELMODRAFT_132724 [Selaginella moellendorffii]
Length = 578
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 163/446 (36%), Positives = 251/446 (56%), Gaps = 16/446 (3%)
Query: 1 GFELDLVAGSSLAH-MYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQ 59
G + D V ++L + MY + GSL + ++ M RNVI+W ++ +Q GL + L
Sbjct: 133 GGDADTVVQTALVNIMYARLGSLEDAREIFDAMTTRNVISWTAMVGVHSQLGLNREALRI 192
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ + + G P+ +TF +V+++ LA++ + + A + + G +V V + L+ +
Sbjct: 193 FRSILLEGVTPNDVTFTAVLNASGNLASIRAAKLVQACLSETGFLGNVEVANGLLCALGK 252
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG L++ K F + V W+S IAA HG G + LF+ M+ + + VT + +
Sbjct: 253 CGSLEEVAKFFRVMPVQNQVSWNSAIAANAQHGNGVRGVELFQTMQLEGIDTGSVTLIGV 312
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L +CSH GL +G +F M Y EHY+CV+DLL R G+L+ A ++ +P
Sbjct: 313 LSSCSHAGLVAQGYSYFLNMHVDYGLPAEAEHYSCVIDLLSRAGWLEHAEEFVKRLPFGD 372
Query: 240 NAII-WKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
++ W TLL CK H + GR + ILG+NP PY+++ N++A A +W + R
Sbjct: 373 ESVFPWITLLCGCKLHGDLERGGRATQRILGLNPGSTGPYLVMHNLYAGAGKWPEAAAVR 432
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
++M + KKEPG+SW+E+K ++H+F +GD SHPRS EI LE L +MK G+V DT
Sbjct: 433 KSMVDLGPKKEPGLSWIEVKGRIHEFRVGDTSHPRSSEIHRELERLNDKMKRAGFVCDTK 492
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRG----LIVMLPF----------KYISEIK 404
A ++D+ ++EKE L HSEKLAIAF + L +M K+IS +
Sbjct: 493 AVVYDLQAKEKESLLCQHSEKLAIAFGLISTAAGEPLRIMKNLRVCSDCHSATKFISGLV 552
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
REI+VRDA RFHHFR G CSC D+W
Sbjct: 553 GREIVVRDAYRFHHFRGGACSCEDFW 578
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 123/254 (48%), Gaps = 3/254 (1%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
ELD++ +++ + Y K G L + + +R+ W +I+ + ++ L+
Sbjct: 33 LELDVIVATAVMNAYGKCGDLDSARGLFDRILVRDAAVWNAMISLLVVHEQGDEALELCR 92
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLIS-MYSRC 120
MR+ G P K T V+ +++C +G +IHA + G D V ++L++ MY+R
Sbjct: 93 QMRLDGVTPSKGTCVAALNACCHSRDFSEGLRIHAFARELGGDADTVVQTALVNIMYARL 152
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L+D+ + F +V+ W++M+ + G EA+ +F + + NDVTF ++L
Sbjct: 153 GSLEDAREIFDAMTTRNVISWTAMVGVHSQLGLNREALRIFRSILLEGVTPNDVTFTAVL 212
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
A + + + + + +E ++ LG+CG L+E A R MPV+ N
Sbjct: 213 NASGNLA-SIRAAKLVQACLSETGFLGNVEVANGLLCALGKCGSLEEVAKFFRVMPVQ-N 270
Query: 241 AIIWKTLLSACKTH 254
+ W + ++A H
Sbjct: 271 QVSWNSAIAANAQH 284
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 62/155 (40%), Gaps = 39/155 (25%)
Query: 172 NDVTFVSLLYACSH-------------CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDL 218
NDVT+V++L AC H CG E D++V T V++
Sbjct: 3 NDVTYVAILGACGHPWEVDTIRARVEACGSLE-----LDVIVA-----------TAVMNA 46
Query: 219 LGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAA 276
G+CG LD A L + V+ +A +W ++S H+ D A + ++ GV P
Sbjct: 47 YGKCGDLDSARGLFDRILVR-DAAVWNAMISLLVVHEQGDEALELCRQMRLDGVTPSKGT 105
Query: 277 PYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPG 311
L+ S +F E +R +E G
Sbjct: 106 CVAALNACCHS-------RDFSEGLRIHAFARELG 133
>gi|296085345|emb|CBI29077.3| unnamed protein product [Vitis vinifera]
Length = 671
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 164/441 (37%), Positives = 256/441 (58%), Gaps = 15/441 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+V+ +++ Y+K + V M R+VI+W T+I G A G + L ++ MR
Sbjct: 231 DVVSWNAMIDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMR 290
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
VG +P + T VS++S+C+ L L +G +H + ++ V ++L+ MY++CG +
Sbjct: 291 AVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKIS 350
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ + F E DV+ W+++IA HG +EA LF++M++ E ND+TFV++L ACS
Sbjct: 351 LATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACS 410
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H G+ ++G + D M Y +P++EHY CV+DLL R G+L+EA LI MP++ N
Sbjct: 411 HAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSAL 470
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
LL C+ H + ++ + + ++ + P + Y+LLSNI+A+AK+W + R M+
Sbjct: 471 GALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVN 530
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLR-GYVPDTGADMHD 363
+ K PGVS +E+K VH+F GD SHP S +I L E+ + +K GY DTG + D
Sbjct: 531 GISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSAIGYSADTGNVLLD 590
Query: 364 MDSEEKEYNLKHHSEKLAIAFA----------EHTRGLIVMLP----FKYISEIKNREII 409
M+ E+KE+ L HSEKLAIA+ + L V K IS++ REII
Sbjct: 591 MEEEDKEHALAVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVIKLISKVYGREII 650
Query: 410 VRDASRFHHFRNGKCSCGDYW 430
VRD +RFHHF +G+CSC D+W
Sbjct: 651 VRDRNRFHHFEDGECSCLDFW 671
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 123/278 (44%), Gaps = 43/278 (15%)
Query: 42 TLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA 101
+LI + + + L Y+ M G +PD +T+ VI +C+E + G +H VVK+
Sbjct: 136 SLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNESSVTWFGLLVHTHVVKS 195
Query: 102 GASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFH---------- 151
G D ++SSLI +Y+ L + + F C DVV W++MI Y H
Sbjct: 196 GFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHARMVF 255
Query: 152 ---------------------GKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKE 190
GK EA+ LF+QM + + T VSLL AC+H G +
Sbjct: 256 DRMVCRDVISWNTMINGYAICGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALD 315
Query: 191 KGMEFFDLMVKKYRRKPRLEHY----TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKT 246
KG L + Y R+E T +VD+ +CG + A + M K + + W T
Sbjct: 316 KG-----LHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESK-DVLAWNT 369
Query: 247 LLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLS 282
+++ H + A ++ +E+ GV P D +LS
Sbjct: 370 IIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILS 407
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 55/93 (59%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
E++ + G++L MY K G + +V M ++V+AW T+IAG A +G ++ +
Sbjct: 329 IEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFK 388
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQI 94
M+ G P+ ITFV+++S+CS + +GQ++
Sbjct: 389 EMKEAGVEPNDITFVAILSACSHAGMVDEGQKL 421
>gi|15235472|ref|NP_195434.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097747|sp|O23169.1|PP353_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g37170
gi|2464864|emb|CAB16758.1| putative protein [Arabidopsis thaliana]
gi|7270666|emb|CAB80383.1| putative protein [Arabidopsis thaliana]
gi|332661361|gb|AEE86761.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 160/444 (36%), Positives = 256/444 (57%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + D V SSL MY K G + E + + ++V++W ++I ++ + +
Sbjct: 248 GLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLF 307
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ + RP++ TF V+++C++L T G+Q+H + + G SSL+ MY++C
Sbjct: 308 SELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKC 367
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ + C D+V W+S+I +G+ +EA+ F+ + + + + VTFV++L
Sbjct: 368 GNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVL 427
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+H GL EKG+EFF + +K+R +HYTC+VDLL R G ++ ++I MP+K +
Sbjct: 428 SACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPS 487
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+W ++L C T+ + D+A A+E+ + P++ YV ++NI+A+A +W+ + R+
Sbjct: 488 KFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKR 547
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M+E V K PG SW EIK + H F D SHP +I +L EL +MK GYVP T
Sbjct: 548 MQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLV 607
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA----EHTRGLIVML----------PFKYISEIKNR 406
+HD++ E+KE NL +HSEKLA+AFA E + V K+IS I R
Sbjct: 608 LHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKR 667
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
+I VRD++RFH F NG+CSCGDYW
Sbjct: 668 KITVRDSTRFHCFENGQCSCGDYW 691
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 144/316 (45%), Gaps = 36/316 (11%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGL-------- 52
GF +V + L MY K GSLV+ KV MP R++ +W ++ G A+ GL
Sbjct: 115 GFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLF 174
Query: 53 -----------------------AEDVLDQYNLM-RMVGFRPDKITFVSVISSCSELATL 88
E+ L Y+LM R+ RP+ T +++ + + +
Sbjct: 175 DEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCI 234
Query: 89 GQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAY 148
+G++IH +V+AG D + SSL+ MY +CGC+D++ F + DVV W+SMI Y
Sbjct: 235 RRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRY 294
Query: 149 GFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPR 208
+ E +LF ++ N+ TF +L AC+ +E G + M + P
Sbjct: 295 FKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMT-RVGFDPY 353
Query: 209 LEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL 268
+ +VD+ +CG ++ A ++ P K + + W +L+ C + D A + + +L
Sbjct: 354 SFASSSLVDMYTKCGNIESAKHVVDGCP-KPDLVSWTSLIGGCAQNGQPDEALKYFDLLL 412
Query: 269 --GVNPQDAAPYVLLS 282
G P +LS
Sbjct: 413 KSGTKPDHVTFVNVLS 428
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 106/239 (44%), Gaps = 46/239 (19%)
Query: 51 GLAEDVLDQYNLMR----MVGF--RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGAS 104
G A DVL L+R ++G +P T+ ++I CS+ L +G+++H + +G
Sbjct: 58 GEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFV 117
Query: 105 LDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM 164
+ + + L+ MY++CG L D+ K F E D+ W+ M+ Y G EEA LF++M
Sbjct: 118 PGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEM 177
Query: 165 EQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEH------------- 211
+K+ ++ +++ E+ + + LM + +P +
Sbjct: 178 TEKD----SYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKC 233
Query: 212 ----------------------YTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
++ ++D+ G+CG +DEA + + V+ + + W +++
Sbjct: 234 IRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKI-VEKDVVSWTSMI 291
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 165/438 (37%), Positives = 255/438 (58%), Gaps = 14/438 (3%)
Query: 7 VAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV 66
V+ +SL ++++G + K+ MP ++++W T+I Q + ++ ++ + +M+
Sbjct: 408 VSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQSE 467
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
G DK+T V V S+C L L + IH + K D+ + ++L+ M++RCG +
Sbjct: 468 GITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFARCGDPQSA 527
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHC 186
++ F + DV W++ I A G G AI LF++M Q+ + + V FV+LL A SH
Sbjct: 528 MQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVALLTALSHG 587
Query: 187 GLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKT 246
GL E+G F M Y P+ HY C+VDLLGR G L EA +LI +M ++ N +IW +
Sbjct: 588 GLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLINSMQMEPNDVIWGS 647
Query: 247 LLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNV 306
LL+AC+ HK+ D+A AE I ++P+ +VLLSNI+ASA RW V++ R ++E+
Sbjct: 648 LLAACRVHKNVDIAAYAAERISELDPERTGIHVLLSNIYASAGRWDDVAKVRLHLKEKGA 707
Query: 307 KKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDS 366
K PG S +EI ++ +FT GD+SHP I+ L+E+ ++ GYVPD + D++
Sbjct: 708 HKMPGSSSIEINGKIFEFTTGDESHPEMTHIEPMLKEICCRLRDIGYVPDLTNVLLDVNE 767
Query: 367 EEKEYNLKHHSEKLAIAFA--EHTRGLIVMLP------------FKYISEIKNREIIVRD 412
+EKEY L HSEKLAIAFA +G+ + + K +S+ +REIIVRD
Sbjct: 768 KEKEYLLSRHSEKLAIAFALISTGQGMPIRVAKNLRICSDCHSFAKLVSKSYSREIIVRD 827
Query: 413 ASRFHHFRNGKCSCGDYW 430
+RFH F+ G CSCGDYW
Sbjct: 828 NNRFHFFQQGFCSCGDYW 845
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 133/285 (46%), Gaps = 41/285 (14%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE D+ +SL H Y + G + +V M RNV++W +LI G A+ G ++ + +
Sbjct: 169 GFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLF 228
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M VG RP+ +T V VIS+C++L L G+Q+ + + ++ ++++L+ MY +C
Sbjct: 229 FEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYMKC 288
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +D + K F EC ++VL++++++ Y G E + + +M + + +T +S +
Sbjct: 289 GAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAV 348
Query: 181 YACSH-----------------------------------CGLKEKGMEFFDLMVKKYRR 205
ACS CG +E FD M+ K R
Sbjct: 349 SACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLNKTRV 408
Query: 206 KPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+ ++ R G ++ A + MP ++ + W T++ A
Sbjct: 409 S-----WNSLIAGFVRNGDMESAWKIFSAMP-DSDLVSWNTMIGA 447
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 148/330 (44%), Gaps = 35/330 (10%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
E++ + ++L MYMK G++ + K+ +N++ + T+++ + GLA +VL
Sbjct: 271 LEVNALMVNALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLG 330
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M G RPD+IT +S +S+CSEL + G+ H V++ G V +++I+MY +CG
Sbjct: 331 EMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCG 390
Query: 122 -----C--------------------------LDDSVKTFLECEYSDVVLWSSMIAAYGF 150
C ++ + K F SD+V W++MI A
Sbjct: 391 KQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQ 450
Query: 151 HGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLE 210
+EAI LF M+ + A+ VT V + AC + G + ++ +KK +
Sbjct: 451 ESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLA-KWIHGYIKKKDIHFDMH 509
Query: 211 HYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL-- 268
T +VD+ RCG ++A + N VK + W + A + A + +E+L
Sbjct: 510 LGTALVDMFARCGD-PQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQ 568
Query: 269 GVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
G+ P LL+ + QG FR
Sbjct: 569 GIKPDGVVFVALLTALSHGGLVEQGWHIFR 598
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 106/208 (50%), Gaps = 2/208 (0%)
Query: 42 TLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA 101
+LI G + GL + + + +G PD TF V+S+C++ A L +G Q+H +VK
Sbjct: 109 SLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIVKM 168
Query: 102 GASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLF 161
G D+ V +SLI Y CG +D + F + +VV W+S+I Y G +EA++LF
Sbjct: 169 GFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLF 228
Query: 162 EQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGR 221
+M + N VT V ++ AC+ + G E + + + +VD+ +
Sbjct: 229 FEMVEVGIRPNSVTMVGVISACAKLQDLQLG-EQVCTCIGELELEVNALMVNALVDMYMK 287
Query: 222 CGYLDEAAALIRNMPVKANAIIWKTLLS 249
CG +D+A I + V N +++ T++S
Sbjct: 288 CGAIDKARK-IFDECVDKNLVLYNTIMS 314
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 83/183 (45%), Gaps = 5/183 (2%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
D+ G++L M+ + G +V M R+V AW I A G ++ ++ M
Sbjct: 506 FDMHLGTALVDMFARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEM 565
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSRCGC 122
G +PD + FV+++++ S + QG I + G + ++ + R G
Sbjct: 566 LQQGIKPDGVVFVALLTALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDLLGRAGL 625
Query: 123 LDDSVKTF--LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDV-TFVSL 179
L +++ ++ E +DV+ W S++AA H + A E++ + + E + +S
Sbjct: 626 LSEALSLINSMQMEPNDVI-WGSLLAACRVHKNVDIAAYAAERISELDPERTGIHVLLSN 684
Query: 180 LYA 182
+YA
Sbjct: 685 IYA 687
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 81/190 (42%), Gaps = 26/190 (13%)
Query: 77 SVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYS 136
S S + T+ + +Q+H+++ K G + +++LIS + G TF EY+
Sbjct: 35 SPTGSFKKCKTMTELKQLHSQITKNGLNHHPLSLTNLISSCTEMG-------TFESLEYA 87
Query: 137 DVVL---------------WSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
L +SS+I + G G +AI +F Q+ ++ TF +L
Sbjct: 88 QKALELFIEDNGIMGTHYMFSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLS 147
Query: 182 ACSHCGLKEKGMEFFDLMVK-KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+ +G + +VK + R +E+ ++ G CG +D + M + N
Sbjct: 148 ACTKSAALTEGFQVHGAIVKMGFERDMFVENS--LIHFYGECGEIDCMRRVFDKMSER-N 204
Query: 241 AIIWKTLLSA 250
+ W +L+
Sbjct: 205 VVSWTSLIGG 214
>gi|302143669|emb|CBI22530.3| unnamed protein product [Vitis vinifera]
Length = 539
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 151/371 (40%), Positives = 232/371 (62%), Gaps = 26/371 (7%)
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+N + G TF S++S + + +G+G+QIH ++K G + + ++LISMYSR
Sbjct: 195 FNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSR 254
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG ++ + + F E E +V+ W+SMI + HG A+ +F QM + + N++T+V++
Sbjct: 255 CGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHQMLETGTKPNEITYVAV 314
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L ACSH G+ +G + F+ M K++ PR+EHY C+VDLLGR G L EA I +MP+ A
Sbjct: 315 LSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMA 374
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
+A++W+TLL AC H +T++ AE IL P D A Y+LLSN+HASA +W+ V + R+
Sbjct: 375 DALVWRTLLGACHVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRK 434
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
+M+ERN+ KE G SW+E++N+VH+F +G+ SHP++ +I L++L S++K GY+PDT
Sbjct: 435 SMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDT-- 492
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPFKYISEIKNREIIVRDASRFHHF 419
++NL+ + HT KYIS REI+VRD++RFHH
Sbjct: 493 ----------DFNLR-------VCGDCHT-------AIKYISMATGREIVVRDSNRFHHI 528
Query: 420 RNGKCSCGDYW 430
+NG CSC DYW
Sbjct: 529 KNGVCSCNDYW 539
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 91/170 (53%), Gaps = 2/170 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G++ + ++L MY + G++ +V M RNVI+W ++I G A++G A L+ +
Sbjct: 237 GYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMF 296
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSR 119
+ M G +P++IT+V+V+S+CS + + +GQ+ + K G + + ++ + R
Sbjct: 297 HQMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGR 356
Query: 120 CGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE 168
G L ++++ +D ++W +++ A HG E + E + ++E
Sbjct: 357 SGLLVEAMEFINSMPLMADALVWRTLLGACHVHGNTELGRHAAEMILEQE 406
>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 749
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 168/462 (36%), Positives = 261/462 (56%), Gaps = 39/462 (8%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQN-GLAED---- 55
G+ ++ +S+ ++Y+K G L+E +K+ M N++ W +IAG A+ LAED
Sbjct: 290 GYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAA 349
Query: 56 ------VLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV 109
L + + G +PD TF SV+S CS L L QG+QIH +++K+G DV V
Sbjct: 350 HKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVV 409
Query: 110 ISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEF 169
++L+SMY++CG +D + K FLE ++ W+SMI + HG ++A+ LFE M
Sbjct: 410 GTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGI 469
Query: 170 EANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAA 229
+ N VTFV +L ACSH GL ++ + +F+LM K+Y KP ++H+ C++D+ R G ++EA
Sbjct: 470 KPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAF 529
Query: 230 ALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAK 289
++ M + N IW L++ C++H +D+ AE++L + P+D YV L N+H SA
Sbjct: 530 DVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMHISAG 589
Query: 290 RWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMK 349
RW+ VS+ R+ M+E V K SW+ IK +V+ F DKSH +S+E+ LE + +E+K
Sbjct: 590 RWKDVSKVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQSLEMYKLLETVLNEVK 649
Query: 350 LRGYVP--DTGADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP----------- 396
GY P D + + E + HSEKLAIAF ++ LP
Sbjct: 650 ALGYEPIEDVEVIEKEENEERVLSSTVLHSEKLAIAFG------LLNLPTATPIRVVKSI 703
Query: 397 ---------FKYISEIKNREIIVRDASRFHHFRNGKCSCGDY 429
++IS +K REI++RD+ + H F NG CSCG Y
Sbjct: 704 TMCRDCHNFIRFISLLKGREIVIRDSKQLHKFLNGYCSCGGY 745
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 153/318 (48%), Gaps = 15/318 (4%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
+ D G+SL+ Y K L K +++ ++VI+W ++I+ NG A L +
Sbjct: 191 DFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMD 250
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M G +P++ T SV+S+C + TL G QIH+ +K G + + +S++ +Y +CG
Sbjct: 251 MLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGW 310
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAY-----------GFHGKGEEAINLFEQMEQKEFEA 171
L ++ K F E ++V W++MIA + H G A+ +F+++ + +
Sbjct: 311 LIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKP 370
Query: 172 NDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAAL 231
+ TF S+L CS+ E+G + ++K + T +V + +CG +D+A+
Sbjct: 371 DLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVG-TALVSMYNKCGSIDKASKA 429
Query: 232 IRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEE--ILGVNPQDAAPYVLLSNIHASAK 289
MP + I W ++++ H + A ++ E+ ++G+ P +LS +
Sbjct: 430 FLEMPSR-TMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGL 488
Query: 290 RWQGVSEFREAMRERNVK 307
+ + F ++ N+K
Sbjct: 489 ADEALYYFELMQKQYNIK 506
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 122/251 (48%), Gaps = 4/251 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF DL + L ++Y K G + KV +P RNV AW TL+ G QN L +
Sbjct: 88 GFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLF 147
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G P T V+++CS L ++ G+Q+HA ++K D + +SL S YS+
Sbjct: 148 IKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKF 207
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
L+ ++K F + DV+ W+S+I++ +G+ +++ F M + N+ T S+L
Sbjct: 208 RRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVL 267
Query: 181 YACSHCGLKEKGMEFFDLMVK-KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
AC + G + L +K Y +++ ++ L +CG+L EA L M
Sbjct: 268 SACCVMLTLDLGAQIHSLSIKLGYGSSILIKN--SIMYLYLKCGWLIEAQKLFEGMET-L 324
Query: 240 NAIIWKTLLSA 250
N + W +++
Sbjct: 325 NLVTWNAMIAG 335
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 89/193 (46%), Gaps = 16/193 (8%)
Query: 66 VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD 125
+G R + + ++ C + + + IH +VK G D+ V++ L+++YS+CG ++
Sbjct: 52 LGTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMES 111
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
+ K F +V W++++ Y + A+ LF +M + ++ T +L ACS
Sbjct: 112 AHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSS 171
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLG-------RCGYLDEAAALIRNMPVK 238
E G + V Y K ++ T + + L R + +A +I+ +
Sbjct: 172 LQSIEFGKQ-----VHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIK----E 222
Query: 239 ANAIIWKTLLSAC 251
+ I W +++S+C
Sbjct: 223 KDVISWTSVISSC 235
>gi|297792601|ref|XP_002864185.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310020|gb|EFH40444.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 588
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 166/444 (37%), Positives = 260/444 (58%), Gaps = 15/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G++ D+ GSSL MY K G +V K+ MP+RNV+ W ++ G AQ G E+ L +
Sbjct: 146 GYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPLRNVVTWSGMMYGYAQMGENEEALWLF 205
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ +F +VIS C+ L G+QI +K+ V SSL+S+YS+C
Sbjct: 206 KEALFENLAVNDYSFSTVISVCANSTLLELGRQIQGLCIKSSFDSSSFVGSSLVSLYSKC 265
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L+ + + F E ++ +W++M+ A H ++ I LF++M+ + N +TF+++L
Sbjct: 266 GDLEGAYQVFDEVPMRNLGIWNAMLKACAQHSHTQKVIELFKRMKLSGMKPNFITFLNVL 325
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL ++G +FDLM K+ R +P +HY +VD+LGR G L+EA ++ NMP+
Sbjct: 326 NACSHAGLVDEGKYYFDLM-KESRIEPTDKHYASLVDMLGRAGKLEEALEIVTNMPIDPT 384
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+W LL++C HK+T++A A+++ + P + ++ LSN +A+ R++ ++ R+
Sbjct: 385 ESVWGALLTSCTIHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKL 444
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
+R+R KKE G+SW+E +N+VH F G++ H RS EI L EL EM+ GYV DT
Sbjct: 445 LRDRGEKKETGLSWVEERNKVHTFAAGERRHERSKEIYEKLAELGEEMEKAGYVADTSYV 504
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHT----RGLIVML----------PFKYISEIKNR 406
+ ++D +EK +++HSE+LAIAF T R + VM K++S R
Sbjct: 505 LREVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSICTRR 564
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
IIVRD +RFH F +GKCSC DYW
Sbjct: 565 VIIVRDNNRFHRFEDGKCSCNDYW 588
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 120/257 (46%), Gaps = 2/257 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G L + ++L + Y KS + + P ++ W ++I+ AQN L L+
Sbjct: 45 GLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSATTWSSIISCFAQNELPWMSLEFL 104
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M RPD S SC L+ G+ +H +K G DV V SSL+ MY++C
Sbjct: 105 RKMMAGSLRPDDHVLPSATKSCGILSRCDIGKSVHCLSMKTGYDADVFVGSSLVDMYAKC 164
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + K F E +VV WS M+ Y G+ EEA+ LF++ + ND +F +++
Sbjct: 165 GEIVYARKMFDEMPLRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSTVI 224
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
C++ L E G + L +K + +V L +CG L+ A + +P++ N
Sbjct: 225 SVCANSTLLELGRQIQGLCIKSSFDSSSFVG-SSLVSLYSKCGDLEGAYQVFDEVPMR-N 282
Query: 241 AIIWKTLLSACKTHKST 257
IW +L AC H T
Sbjct: 283 LGIWNAMLKACAQHSHT 299
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 73/173 (42%), Gaps = 24/173 (13%)
Query: 87 TLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIA 146
++ +G Q+H +VK+G SL V ++LI+ YS+ DS + F + WSS+I+
Sbjct: 30 SIVKGLQLHGYIVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSATTWSSIIS 89
Query: 147 AYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS-----------HCGLKEKGMEF 195
+ + ++ +M +D S +C HC + G +
Sbjct: 90 CFAQNELPWMSLEFLRKMMAGSLRPDDHVLPSATKSCGILSRCDIGKSVHCLSMKTGYD- 148
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
D+ V + +VD+ +CG + A + MP++ N + W ++
Sbjct: 149 ADVFVG-----------SSLVDMYAKCGEIVYARKMFDEMPLR-NVVTWSGMM 189
>gi|115467246|ref|NP_001057222.1| Os06g0231400 [Oryza sativa Japonica Group]
gi|51535413|dbj|BAD37283.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595262|dbj|BAF19136.1| Os06g0231400 [Oryza sativa Japonica Group]
gi|125596589|gb|EAZ36369.1| hypothetical protein OsJ_20697 [Oryza sativa Japonica Group]
Length = 602
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 157/449 (34%), Positives = 252/449 (56%), Gaps = 24/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G LD+V+ +++ + G + + +V MP RN+++W ++I+G + D L+ +
Sbjct: 159 GGALDVVSWTTMVGGLCRLGLVDDAREVFDAMPARNLVSWNSMISGYVKADRFLDALEVF 218
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ MR +G + S + +C+ LG+G++I+ V ++G +D + ++++ MY +C
Sbjct: 219 DEMRALGVEGNGFVATSALVACTGAGALGRGREIYRWVEQSGIEVDAKLATAVVDMYCKC 278
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
GC+D++ F + W+ MI + HG+ ++A+ LF QME +DVT +++L
Sbjct: 279 GCVDEAWGVFDSLPARGLTTWNCMIGGFAVHGRCDDALELFHQMEAAGVAPDDVTLLNVL 338
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+H G +G + + +V ++ +P+ EHY C+VDL GR G LDEA +I MP+ +
Sbjct: 339 TACAHAGEVSEGRRYLNHIVSRHGIEPKGEHYGCMVDLFGRAGQLDEAKKVIDEMPMDPD 398
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+ LL ACK H D+ I ++ ++P ++ YVLL+N+ A A RW V + R
Sbjct: 399 LAVLGALLGACKIHGDVDLGEAIGWRVIDLDPDNSGRYVLLANLLAGAGRWDEVGKVRRL 458
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M ERNV KE G S +E+ + +F G+ HP++ EI ++ S ++ GYVPDTG
Sbjct: 459 MDERNVSKEAGRSVIEVDGEACEFRCGNLRHPQAREIYAMAVDMVSRIRAEGYVPDTGEA 518
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
+HD+ E+KE L HSEKLAIAF GL+ P KY+S
Sbjct: 519 LHDVAEEDKEAALLCHSEKLAIAF-----GLLRARPRETLRITKNLRVCRDCHEATKYVS 573
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+ REI+VRD SRFHHF++G CSC DYW
Sbjct: 574 RVFGREIVVRDRSRFHHFKDGMCSCKDYW 602
>gi|296087881|emb|CBI35164.3| unnamed protein product [Vitis vinifera]
Length = 663
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 160/439 (36%), Positives = 252/439 (57%), Gaps = 46/439 (10%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L MY K G L ++ + + V++W +IAG ++ E+ + M+
Sbjct: 233 TALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIF 292
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P++IT ++ K +D + ++L+ MY++CG ++ + +
Sbjct: 293 PNEITMLN----------------------KERVEVDCILNTALVDMYAKCGDINAAGRL 330
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F+E D+ +W+++I + HG GEEA+++F +ME++ + ND+TF+ LL+ACSH GL
Sbjct: 331 FIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLV 390
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
+G + F+ MV + P++EHY C+VDLLGR G LDEA +I++MP+K N I+W L++
Sbjct: 391 TEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVA 450
Query: 250 ACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKE 309
AC+ HK+ + A ++L + P++ VL+SNI+A+A RW + R+ M+ +KKE
Sbjct: 451 ACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKE 510
Query: 310 PGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEK 369
PG S +E+ VH+F MGD+SHP+ I+ L E+ ++ GYVPDT + ++D EEK
Sbjct: 511 PGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEK 570
Query: 370 EYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREIIV 410
E L +HSEKLA+AF GLI P K +S+I R IIV
Sbjct: 571 ETALTYHSEKLAMAF-----GLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIV 625
Query: 411 RDASRFHHFRNGKCSCGDY 429
RD +RFHHFR G CSCGDY
Sbjct: 626 RDRNRFHHFREGYCSCGDY 644
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 108/253 (42%), Gaps = 23/253 (9%)
Query: 40 WITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVV 99
W +I + + L+ Y +R + F D SV+ +C +++ G++IH V+
Sbjct: 127 WNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVL 186
Query: 100 KAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLW----SSMIAAYGFHGKGE 155
K G DV V ++L+ MY C C++ + F + DVV W ++++ Y G
Sbjct: 187 KKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWIPTTTALLDMYAKCGHLG 246
Query: 156 EAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFF------------DLMVKKY 203
A LF + QK V++ +++ C E+G + F M+ K
Sbjct: 247 LARQLFNGLTQKTV----VSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLNKE 302
Query: 204 RRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRI 263
R + T +VD+ +CG ++ A L + + +W +++ H + A I
Sbjct: 303 RVEVDCILNTALVDMYAKCGDINAAGRLFIEA-ISRDICMWNAIITGFAMHGYGEEALDI 361
Query: 264 AEEI--LGVNPQD 274
E+ GV P D
Sbjct: 362 FAEMERQGVKPND 374
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 89/188 (47%), Gaps = 7/188 (3%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E+D + ++L MY K G + ++ R++ W +I G A +G E+ LD +
Sbjct: 305 EVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAE 364
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSRCG 121
M G +P+ ITF+ ++ +CS + +G+++ ++V G + ++ + R G
Sbjct: 365 MERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAG 424
Query: 122 CLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGK---GEEAINLFEQMEQKEFEANDVTFV 177
LD++ + + ++W +++AA H GE A ++E + N +
Sbjct: 425 LLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYN--VLM 482
Query: 178 SLLYACSH 185
S +YA ++
Sbjct: 483 SNIYAAAN 490
>gi|359491266|ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 663
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 164/442 (37%), Positives = 249/442 (56%), Gaps = 16/442 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D++ +S+ Y G LV ++ +MP RN ++W ++AG + + L +N M
Sbjct: 222 DVITWTSVVKGYAMRGELVRARELFDMMPGRNDVSWAVMVAGYVGHRFYNEALQCFNDML 281
Query: 65 MVG-FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
+P++ VS++S+C+ L L QG+ IH + K L + ++LI MY++CG +
Sbjct: 282 CHDEVKPNEAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTALIDMYAKCGRI 341
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
D + + F D++ W+SMI+ HG G E + F +M + F+ +D+T + +L C
Sbjct: 342 DCARRVFDGLHKRDLLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPDDITLLGVLNGC 401
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
SH GL E+G+ F M+ + P+LEHY C++DLLGR G L+ A I++MP++ + +
Sbjct: 402 SHSGLVEEGLSIFHDMIPLWGIVPKLEHYGCLIDLLGRAGRLESAFEAIKSMPMEPDVVA 461
Query: 244 WKTLLSACKTHKSTDMAGRIAEEILGVNP-QDAAPYVLLSNIHASAKRWQGVSEFREAMR 302
W+ LLSAC+ H D+ RI I + P YVLLSN++AS +W+ V++ R+AM
Sbjct: 462 WRALLSACRIHGDVDLGERIINHIAELCPGSHGGGYVLLSNLYASMGQWESVTKVRKAMS 521
Query: 303 ERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLR-GYVPDTGADM 361
+R + PG SW+EI VH+F DK HPR EI+ L E+ + + GYVP T +
Sbjct: 522 QRGSEGCPGCSWIEIDGVVHEFLAADKLHPRISEINKKLNEVLRRISIEGGYVPSTKQVL 581
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML-----------PFKYISEIKNREI 408
D++ E+KE + HSEKLA+AF G I + K IS + NREI
Sbjct: 582 FDLNEEDKEQAVSWHSEKLAVAFGLLSTQEGTIRITKNLRTCEDCHSAMKTISLVFNREI 641
Query: 409 IVRDASRFHHFRNGKCSCGDYW 430
+VRD SRFH FR G CSC DYW
Sbjct: 642 VVRDRSRFHTFRYGNCSCTDYW 663
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 140/329 (42%), Gaps = 42/329 (12%)
Query: 12 LAHMYMKSGSLVEGEKVIRLMP-IRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRP 70
L H Y+ +L V P + I W +I ++ +++ L ++ M G RP
Sbjct: 93 LIHSYIGCRNLSFARIVFDQFPSLPPTIIWNLMIQAYSKTPSSQESLYLFHQMLAHG-RP 151
Query: 71 ---DKITFVSVISSCSELATL-GQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
DK TF V ++CS TL G G+ +H VVK G D+ V +SL++MYS + D+
Sbjct: 152 TSADKYTFTFVFTACSRHPTLRGYGENVHGMVVKDGYESDIFVGNSLVNMYSIFSRMVDA 211
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQK------------------- 167
+ F E DV+ W+S++ Y G+ A LF+ M +
Sbjct: 212 KRVFDEMPQRDVITWTSVVKGYAMRGELVRARELFDMMPGRNDVSWAVMVAGYVGHRFYN 271
Query: 168 -------------EFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC 214
E + N+ VS+L AC+H G ++G ++ + + K R T
Sbjct: 272 EALQCFNDMLCHDEVKPNEAVLVSILSACAHLGALDQG-KWIHVYIDKNRILLSSNISTA 330
Query: 215 VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNP 272
++D+ +CG +D A + + K + + W +++S H E+L G P
Sbjct: 331 LIDMYAKCGRIDCARRVFDGLH-KRDLLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKP 389
Query: 273 QDAAPYVLLSNIHASAKRWQGVSEFREAM 301
D +L+ S +G+S F + +
Sbjct: 390 DDITLLGVLNGCSHSGLVEEGLSIFHDMI 418
>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Vitis vinifera]
Length = 913
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 169/455 (37%), Positives = 251/455 (55%), Gaps = 32/455 (7%)
Query: 1 GFELDLVAGSSLAHMYMKSG------SLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAE 54
G + DLV + + Y G +++ K + L P NV++W LI+G +Q G
Sbjct: 466 GIKPDLVTWNGMISGYAMWGCGKEALAVLHQTKSLGLTP--NVVSWTALISGSSQAGNNR 523
Query: 55 DVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLI 114
D L + M+ G P+ + ++ +C+ L+ L +G++IH ++ G DV V ++LI
Sbjct: 524 DSLKFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALI 583
Query: 115 SMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDV 174
MYS+ L ++ K F + + W+ MI + G G+EAI++F +M++ + +
Sbjct: 584 DMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAI 643
Query: 175 TFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRN 234
TF +LL AC + GL +G ++FD M+ YR PRLEHY C+VDLLGR GYLDEA LI
Sbjct: 644 TFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHT 703
Query: 235 MPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGV 294
MP+K +A IW LL +C+ HK+ A A+ + + P ++A Y+L+ N+++ RW+ +
Sbjct: 704 MPLKPDATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDM 763
Query: 295 SEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYV 354
RE M V+ SW++I +VH F+ +K HP + +I L +L SEMK GYV
Sbjct: 764 DHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYV 823
Query: 355 PDTGADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVML---PF-------------- 397
PD +MD EK+ L H+EKLAI T GLI M P
Sbjct: 824 PDVNCVYQNMDEVEKQKILLSHTEKLAI-----TYGLIKMKAGEPIRVIKNTRICSDCHS 878
Query: 398 --KYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
KYIS +K RE+ +RD RFHHFR GKCSC D+W
Sbjct: 879 AAKYISLVKARELFLRDGVRFHHFREGKCSCNDFW 913
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 85/154 (55%), Gaps = 2/154 (1%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
+++ W L++G +G E+VL+ M+ GF+P+ + SV+ + SEL L G++ H
Sbjct: 334 DIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETH 393
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGE 155
V++ G DV V +SLI MY + L + F + ++ W+S+++ Y F G E
Sbjct: 394 GYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFE 453
Query: 156 EAINLFEQMEQKEFEANDVTFVSLL--YACSHCG 187
+A+ L QME++ + + VT+ ++ YA CG
Sbjct: 454 DALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCG 487
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 123/287 (42%), Gaps = 41/287 (14%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+LD+ +L + Y + L + +V MP + W I Q+ + ++ +
Sbjct: 163 GFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELF 222
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR- 119
M+ + + T V V+ +C ++ L +QIH V + G DV + + LISMYS+
Sbjct: 223 RKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKN 282
Query: 120 ------------------------------CGCLDDSVKTFLECEYS----DVVLWSSMI 145
G L+D+ F E E S D+V W+ ++
Sbjct: 283 GKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLL 342
Query: 146 AAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRR 205
+ + HG EE +N+ ++M+ + F+ N + S+L A S G G E ++ R
Sbjct: 343 SGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVL---RN 399
Query: 206 KPRLEHY--TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+ Y T ++D+ + L A A+ NM + N W +L+S
Sbjct: 400 GFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNR-NIFAWNSLVSG 445
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 119/286 (41%), Gaps = 64/286 (22%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ D+ G+SL MY+K+ SL + V M RN+ AW +L++G + G+ ED L
Sbjct: 400 GFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLL 459
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
N M G +PD +T+ +IS A G G++ A V+ SL G+ +++S
Sbjct: 460 NQMEKEGIKPDLVTWNGMISG---YAMWGCGKEALA-VLHQTKSL--GLTPNVVS----- 508
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
W+++I+ G +++ F QM+Q+ N + LL
Sbjct: 509 --------------------WTALISGSSQAGNNRDSLKFFAQMQQEGVMPNSASITCLL 548
Query: 181 YACSHCGLKEKGMEFFDLMV----------------------------KKYRR--KPRLE 210
AC+ L +KG E L + K +RR L
Sbjct: 549 RACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLA 608
Query: 211 HYTCVVDLLGRCGYLDEAAALIRNMP---VKANAIIWKTLLSACKT 253
+ C++ G EA ++ M V +AI + LLSACK
Sbjct: 609 SWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKN 654
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 117/296 (39%), Gaps = 34/296 (11%)
Query: 8 AGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAG-KAQNGLAEDVLDQYNLMRMV 66
A +L Y+ G V + RN + W + + K+ G VL+ + +
Sbjct: 68 AAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGK 127
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
G D + + +C+ + + G +IH ++K G LDV + +L++ Y RC L+ +
Sbjct: 128 GVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKA 187
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHC 186
+ F E + +LW+ I K ++ + LF +M+ +A T V +L AC
Sbjct: 188 NQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKM 247
Query: 187 GLKEKGMEF------FDL---------MVKKYRRKPRLE---------------HYTCVV 216
G + F L ++ Y + +LE + ++
Sbjct: 248 GALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMI 307
Query: 217 DLLGRCGYLDEAAAL---IRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILG 269
G+L++A +L + + +K + + W LLS H + I + + G
Sbjct: 308 SSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQG 363
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 164/449 (36%), Positives = 257/449 (57%), Gaps = 24/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF +V + L +Y K G + + +N+ +W +I G ++ E+ L +
Sbjct: 217 GFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLF 276
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G + DK+T S++ +C+ L L G+ +HA + K +DV + ++L+ MY++C
Sbjct: 277 REMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKC 336
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ +++ F E DV+ W+++I G+ E A+ F++M K + + +TFV +L
Sbjct: 337 GSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVL 396
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH G ++G+ F+ M Y +P +EHY +VD+LGR G + EA LI++MP+ +
Sbjct: 397 AACSHAGFVDEGISHFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPD 456
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+ LL AC+ H + + A R A+++L ++P + YVLLSNI+ S+K+W+ RE
Sbjct: 457 QFVLGGLLGACRIHGNLEAAERAAKQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTREL 516
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M ER ++K PG S +E+ VH+F GD SH +S EI+ LE++ S++K GYVPD
Sbjct: 517 MAERGMRKPPGCSQIEVHGVVHEFVKGDSSHRQSSEINEMLEDMISKLKNAGYVPDKSEV 576
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLI---VMLPF----------------KYIS 401
+ DM EEKE L HSEKLAIAF GL+ V P K IS
Sbjct: 577 LFDMAEEEKETELSLHSEKLAIAF-----GLLSTSVGTPIRVVKNLRICSDCHSATKLIS 631
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
++ NREIIVRD +RFHHF++G CSC +W
Sbjct: 632 KLYNREIIVRDRNRFHHFKDGTCSCRGFW 660
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 151/301 (50%), Gaps = 7/301 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D A ++L +MY G LV KV M + V++W T+I AQ + + +
Sbjct: 115 GFASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLF 174
Query: 61 N-LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ +M+ +P+++T V+V+++C+ L ++IH + + G V + + L+ +Y +
Sbjct: 175 DRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCK 234
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CGC+ + F + + ++ W+ MI + EEA+ LF +M+ K + + VT SL
Sbjct: 235 CGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASL 294
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L AC+H G E G ++ +KK R + T +VD+ +CG ++ A + MP K
Sbjct: 295 LLACTHLGALELG-KWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEK- 352
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEE--ILGVNPQDAAPYV-LLSNIHASAKRWQGVSE 296
+ + W L+ + A + +E I GV P DA +V +L+ + +G+S
Sbjct: 353 DVMTWTALILGLAMCGQAENALQYFDEMHIKGVKP-DAITFVGVLAACSHAGFVDEGISH 411
Query: 297 F 297
F
Sbjct: 412 F 412
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 88/168 (52%), Gaps = 4/168 (2%)
Query: 18 KSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVS 77
+SGSL V +P ++I G L ++ L Y M + G PD+ TF S
Sbjct: 34 ESGSLQYARLVFSQIPNPTSYTCNSIIRGCTDKNLHQEALLFYQEMMVQGLIPDRYTFPS 93
Query: 78 VISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSD 137
+ SC + +G+QIH K G + D ++L++MYS CGCL + K F + E
Sbjct: 94 LFKSCRNSS---EGKQIHCHSTKLGFASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKT 150
Query: 138 VVLWSSMIAAYGFHGKGEEAINLFEQMEQKE-FEANDVTFVSLLYACS 184
VV W++MI + + EA+ LF++M + E + N+VT V++L AC+
Sbjct: 151 VVSWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACA 198
>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 938
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 157/450 (34%), Positives = 250/450 (55%), Gaps = 26/450 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+LD SSL MY K G L + + + W +IA A+ G E+ L
Sbjct: 495 GFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAANARYGFGEEALKLV 554
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
MR G D+ F + +S ++LA L +GQQ+H +K G LD +I++ + MY +C
Sbjct: 555 VRMRSAGIEFDQFNFSTALSVAADLAMLEEGQQLHGSTIKLGFELDHFIINAAMDMYGKC 614
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G LDD+++ + + W+++I+ HG+ +A F M + + N V+FV LL
Sbjct: 615 GELDDALRILPQPTDRSRLSWNTLISISARHGQFHKAKETFHDMLKLGVKPNHVSFVCLL 674
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL ++G+ ++ M Y +P +EH C++DLLGR G L EA A I MP+ N
Sbjct: 675 SACSHGGLVDEGLAYYASMTSVYGIQPGIEHCVCMIDLLGRSGRLVEAEAFITEMPIPPN 734
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
++W++LL++C+ +++ D+ + A+ +L ++P D + YVL SN+ A+ RW+ V + R
Sbjct: 735 DLVWRSLLASCRIYRNLDLGRKAAKHLLELDPSDDSAYVLYSNVFATIGRWEDVEDVRGQ 794
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M ++K+P SW++ K + F MGD++HP+ +I+ L L + GYVPDT
Sbjct: 795 MGAHKIQKKPAHSWVKWKGNISIFGMGDQTHPQMEQINGKLLGLMKIVGEAGYVPDTSYS 854
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP--------------------FKYI 400
+ D D E+KE+N+ HSE++A+AF ++ +P FK++
Sbjct: 855 LQDTDEEQKEHNMWSHSERIALAFG------LINIPEGSTVRIFKNLRVCGDCHSFFKFV 908
Query: 401 SEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
S + R+I++RD RFHHF NG CSC DYW
Sbjct: 909 SGVLGRKIVLRDPYRFHHFTNGNCSCSDYW 938
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 137/288 (47%), Gaps = 10/288 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + +L+ G++L Y K + E +KV + MP + + W LI G A N + + +
Sbjct: 392 GLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKLDKVTWNALIGGFANNAELNEAVAAF 451
Query: 61 NLMRMVGFRP-DKITFVSVISSC-SELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
LMR D IT V+++ SC + + G IHA V G LD V SSLI+MY+
Sbjct: 452 KLMREGSTSGVDYITIVNILGSCLTHEDLIKYGIPIHAHTVVTGFDLDQHVQSSLITMYA 511
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+CG L S F + + +W+++IAA +G GEEA+ L +M E + F +
Sbjct: 512 KCGDLHSSSYIFDQLVFKTSSVWNAIIAANARYGFGEEALKLVVRMRSAGIEFDQFNFST 571
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY--TCVVDLLGRCGYLDEAAALIRNMP 236
L + + E+G + +K L+H+ +D+ G+CG LD+A ++ P
Sbjct: 572 ALSVAADLAMLEEGQQLHGSTIK---LGFELDHFIINAAMDMYGKCGELDDALRILPQ-P 627
Query: 237 VKANAIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLS 282
+ + W TL+S H A ++ LGV P + LLS
Sbjct: 628 TDRSRLSWNTLISISARHGQFHKAKETFHDMLKLGVKPNHVSFVCLLS 675
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 114/251 (45%), Gaps = 3/251 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D+ G+S H Y G + +K+ MP RNV++W +L+ + NG ++V++ Y
Sbjct: 89 GLIYDVFVGTSFVHFYASYGIVSNAQKMFNEMPDRNVVSWTSLMVSYSDNGSKKEVINTY 148
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
MR G ++ VISSC L + G Q+ +K G V +SLI M+ C
Sbjct: 149 KRMRHEGICCNENNIALVISSCGFLMDIILGHQLLGHALKFGLETKVSAANSLIFMFGGC 208
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++++ F E D + W+S+I+A + EE+ F M E N T LL
Sbjct: 209 GDINEACSIFNEMNERDTISWNSIISANAQNTLHEESFRYFHWMRLVHEEINYTTLSILL 268
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
C + G L V KY + + ++ + G +A + R MP + +
Sbjct: 269 SICGSVDYLKWGKGVHGLAV-KYGLESNICLCNTLLSVYSDAGRSKDAELIFRRMPER-D 326
Query: 241 AIIWKTLLSAC 251
I W ++L AC
Sbjct: 327 LISWNSML-AC 336
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 130/287 (45%), Gaps = 3/287 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E + A +SL M+ G + E + M R+ I+W ++I+ AQN L E+ +
Sbjct: 190 GLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNTLHEESFRYF 249
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ MR+V + T ++S C + L G+ +H VK G ++ + ++L+S+YS
Sbjct: 250 HWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSDA 309
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G D+ F D++ W+SM+A Y G+ A+ +F +M + E N VTF S L
Sbjct: 310 GRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFTSAL 369
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC G +V + + T ++ G+C + EA + + MP K +
Sbjct: 370 AACLDPEFFTNGKILHGFVVVLGLQDELIIGNT-LITFYGKCHKMAEAKKVFQRMP-KLD 427
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHAS 287
+ W L+ + + A A +++ Y+ + NI S
Sbjct: 428 KVTWNALIGGFANNAELNEA-VAAFKLMREGSTSGVDYITIVNILGS 473
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 115/237 (48%), Gaps = 3/237 (1%)
Query: 15 MYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKIT 74
MY K G + + V M RN +W +++G + G + + + + +G +P
Sbjct: 1 MYSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFM 60
Query: 75 FVSVISSCSELATLG-QGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLEC 133
S++++C++ + + +G Q H +K G DV V +S + Y+ G + ++ K F E
Sbjct: 61 IASLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEM 120
Query: 134 EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGM 193
+VV W+S++ +Y +G +E IN +++M + N+ ++ +C G
Sbjct: 121 PDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGH 180
Query: 194 EFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+ + K+ + ++ ++ + G CG ++EA ++ M + + I W +++SA
Sbjct: 181 QLLGHAL-KFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNER-DTISWNSIISA 235
>gi|414880007|tpg|DAA57138.1| TPA: hypothetical protein ZEAMMB73_430226 [Zea mays]
Length = 648
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 158/410 (38%), Positives = 242/410 (59%), Gaps = 15/410 (3%)
Query: 35 RNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQI 94
+N++AW +++G ++ G+ + L + M+ VG PD++T VSVIS+C++ L G+ +
Sbjct: 240 KNLVAWSAMVSGYSRVGMVNEALGLFREMQAVGVEPDEVTMVSVISACAKAGALDLGKWV 299
Query: 95 HAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKG 154
HA + + G ++D+ + ++LI MY++CG ++ + F D WS+MI + HG
Sbjct: 300 HAYIDRKGITVDLELSTALIDMYAKCGLIERARGVFDAMVEKDTKAWSAMIVGFAIHGLV 359
Query: 155 EEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC 214
E+A+ LF +M + + N+VTF+ +L AC+H GL E G ++ +M + KP +E+Y C
Sbjct: 360 EDALGLFSRMLELKVRPNNVTFIGVLSACAHSGLVEDGRRYWSIM-QNLGIKPSMENYGC 418
Query: 215 VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQD 274
+VDLL R G LD+A + + MPV N++IW+TLL ACK+ D+A + +L + P +
Sbjct: 419 MVDLLCRSGLLDDAYSFVIGMPVSPNSVIWRTLLVACKSSNRIDIAESATKRLLELEPHN 478
Query: 275 AAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRS 334
YVLLSN++AS +W VS R M+ +NV G S +EI +H+F + D SHP
Sbjct: 479 PENYVLLSNLYASNSQWDRVSYLRRKMKGKNVTAIAGRSSIEINGHLHEFVVSDDSHPEI 538
Query: 335 MEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAF------AEHT 388
EI L L E+ ++ G+ P T A +HD+ EEKE L HSE+LAIA+ A H
Sbjct: 539 REIRLVLREMADRVRRAGHKPWTAAVLHDVGEEEKEAALCQHSERLAIAYGLLKTRAPHV 598
Query: 389 RGLIVMLPF--------KYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
++ L F K IS+ NREI+VRD RFH F G CSC D+W
Sbjct: 599 IRVVKNLRFCLDCHEVAKIISKAYNREIVVRDRVRFHKFMGGSCSCKDFW 648
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 109/225 (48%), Gaps = 5/225 (2%)
Query: 32 MPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQG 91
+P + +LI G A + ++R RP+ T + +C+ + G+G
Sbjct: 135 IPDPTAFCYNSLIRALPAAGSAPALAVYRRMLRAGSPRPNSFTLAFALKACAAVPAPGEG 194
Query: 92 QQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSD--VVLWSSMIAAYG 149
+Q+HA+ ++ G + V + L+++Y++C + + +T + D +V WS+M++ Y
Sbjct: 195 RQLHAQALRQGLATSAYVQTGLLNLYAKCEQVALA-RTVFDGMAGDKNLVAWSAMVSGYS 253
Query: 150 FHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRL 209
G EA+ LF +M+ E ++VT VS++ AC+ G + G ++ + + L
Sbjct: 254 RVGMVNEALGLFREMQAVGVEPDEVTMVSVISACAKAGALDLG-KWVHAYIDRKGITVDL 312
Query: 210 EHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
E T ++D+ +CG ++ A + M V+ + W ++ H
Sbjct: 313 ELSTALIDMYAKCGLIERARGVFDAM-VEKDTKAWSAMIVGFAIH 356
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 86/188 (45%), Gaps = 10/188 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +DL ++L MY K G + V M ++ AW +I G A +GL ED L +
Sbjct: 307 GITVDLELSTALIDMYAKCGLIERARGVFDAMVEKDTKAWSAMIVGFAIHGLVEDALGLF 366
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M + RP+ +TF+ V+S+C+ + G++ + + G + ++ + R
Sbjct: 367 SRMLELKVRPNNVTFIGVLSACAHSGLVEDGRRYWSIMQNLGIKPSMENYGCMVDLLCRS 426
Query: 121 GCLDDSVKTFLECEYS-DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFE-----ANDV 174
G LDD+ + S + V+W +++ A K I++ E ++ E +
Sbjct: 427 GLLDDAYSFVIGMPVSPNSVIWRTLLVAC----KSSNRIDIAESATKRLLELEPHNPENY 482
Query: 175 TFVSLLYA 182
+S LYA
Sbjct: 483 VLLSNLYA 490
>gi|5280987|emb|CAB46001.1| hypothetical protein [Arabidopsis thaliana]
gi|7268109|emb|CAB78447.1| hypothetical protein [Arabidopsis thaliana]
Length = 686
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 171/447 (38%), Positives = 250/447 (55%), Gaps = 41/447 (9%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
+ ++ +++ Y KSG E ++ R++P++N+ +W LI+G Q+G + + MR
Sbjct: 238 NTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMR 297
Query: 65 MVGFRP-DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
D + S++ +C+ LA G+Q+H ++LI MY++C +
Sbjct: 298 RERVDILDPLVLSSIVGACANLAASIAGRQVHG--------------NALIDMYAKCSDV 343
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
+ F + DVV W+S+I HG+ E+A+ L++ M + N+VTFV L+YAC
Sbjct: 344 IAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYAC 403
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
SH G EKG E F M K Y +P L+HYTC++DLLGR G LDEA LI MP +
Sbjct: 404 SHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPT 463
Query: 244 WKTLLSACKTHKSTDMAGRIAEEIL-GVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMR 302
W LLSACK M RIA+ ++ +D + Y+LLSNI+ASA W VSE R +
Sbjct: 464 WAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLG 523
Query: 303 ERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLR-GYVPDTGADM 361
E V+K+PG S +E++ + F G+ SHP +I L++L EM++R GYVPDT +
Sbjct: 524 EMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWIL 583
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISE 402
HDMD +EKE L HSE+ A+A+ GL+ +P K+ISE
Sbjct: 584 HDMDEQEKEKLLFWHSERSAVAY-----GLLKAVPGTPIRIVKNLRVCGDCHVVLKHISE 638
Query: 403 IKNREIIVRDASRFHHFRNGKCSCGDY 429
I REIIVRDA+R+HHF+ GKCSC D+
Sbjct: 639 ITEREIIVRDATRYHHFKGGKCSCNDF 665
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 115/236 (48%), Gaps = 11/236 (4%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVG- 67
++L ++Y K G+ +V MP R+ IAW +++ Q L+ L ++ +
Sbjct: 109 ANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSG 168
Query: 68 FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV 127
RPD F +++ +C+ L ++ G+Q+H + + + D V SSL+ MY++CG L+ +
Sbjct: 169 LRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAK 228
Query: 128 KTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCG 187
F + + W++M++ Y G+ EEA+ LF + K N ++ +L+ G
Sbjct: 229 AVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVK----NLYSWTALISGFVQSG 284
Query: 188 LKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
KG+E F + + R + + + ++G C L AA I V NA+I
Sbjct: 285 ---KGLEAFSVFTEMRRERVDILDPLVLSSIVGACANL---AASIAGRQVHGNALI 334
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 131/292 (44%), Gaps = 24/292 (8%)
Query: 25 GEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQ-----YNLMRMVGFRPDKITFVSVI 79
GEKV+ L+P V ++I K NG + ++ + ++L + F+ F
Sbjct: 21 GEKVV-LIPPPLVELISSIIFLKKLNGFRKSIVVRRKKLLFSLTFIFMFK--LFVFFDFG 77
Query: 80 SSCSELA-TLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDV 138
S S + TL + +HA +VK G + ++L+++Y +CG +++ F E + D
Sbjct: 78 SYFSRMNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 137
Query: 139 VLWSSMIAAYG-FHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFF- 196
+ W+S++ A + G+ +D F +L+ AC++ G + G +
Sbjct: 138 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 197
Query: 197 DLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKS 256
+V +Y ++ + +VD+ +CG L+ A A+ ++ VK N I W ++S
Sbjct: 198 HFIVSEYANDEVVK--SSLVDMYAKCGLLNSAKAVFDSIRVK-NTISWTAMVSGYAK--- 251
Query: 257 TDMAGRIAE--EILGVNPQDA--APYVLLSNIHASAKRWQGVSEFREAMRER 304
+GR E E+ + P + L+S S K + S F E RER
Sbjct: 252 ---SGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRER 300
>gi|293335745|ref|NP_001168519.1| uncharacterized protein LOC100382299 [Zea mays]
gi|223948835|gb|ACN28501.1| unknown [Zea mays]
Length = 599
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 158/410 (38%), Positives = 242/410 (59%), Gaps = 15/410 (3%)
Query: 35 RNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQI 94
+N++AW +++G ++ G+ + L + M+ VG PD++T VSVIS+C++ L G+ +
Sbjct: 191 KNLVAWSAMVSGYSRVGMVNEALGLFREMQAVGVEPDEVTMVSVISACAKAGALDLGKWV 250
Query: 95 HAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKG 154
HA + + G ++D+ + ++LI MY++CG ++ + F D WS+MI + HG
Sbjct: 251 HAYIDRKGITVDLELSTALIDMYAKCGLIERARGVFDAMVEKDTKAWSAMIVGFAIHGLV 310
Query: 155 EEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC 214
E+A+ LF +M + + N+VTF+ +L AC+H GL E G ++ +M + KP +E+Y C
Sbjct: 311 EDALGLFSRMLELKVRPNNVTFIGVLSACAHSGLVEDGRRYWSIM-QNLGIKPSMENYGC 369
Query: 215 VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQD 274
+VDLL R G LD+A + + MPV N++IW+TLL ACK+ D+A + +L + P +
Sbjct: 370 MVDLLCRSGLLDDAYSFVIGMPVSPNSVIWRTLLVACKSSNRIDIAESATKRLLELEPHN 429
Query: 275 AAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRS 334
YVLLSN++AS +W VS R M+ +NV G S +EI +H+F + D SHP
Sbjct: 430 PENYVLLSNLYASNSQWDRVSYLRRKMKGKNVTAIAGRSSIEINGHLHEFVVSDDSHPEI 489
Query: 335 MEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAF------AEHT 388
EI L L E+ ++ G+ P T A +HD+ EEKE L HSE+LAIA+ A H
Sbjct: 490 REIRLVLREMADRVRRAGHKPWTAAVLHDVGEEEKEAALCQHSERLAIAYGLLKTRAPHV 549
Query: 389 RGLIVMLPF--------KYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
++ L F K IS+ NREI+VRD RFH F G CSC D+W
Sbjct: 550 IRVVKNLRFCLDCHEVAKIISKAYNREIVVRDRVRFHKFMGGSCSCKDFW 599
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 109/225 (48%), Gaps = 5/225 (2%)
Query: 32 MPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQG 91
+P + +LI G A + ++R RP+ T + +C+ + G+G
Sbjct: 86 IPDPTAFCYNSLIRALPAAGSAPALAVYRRMLRAGSPRPNSFTLAFALKACAAVPAPGEG 145
Query: 92 QQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSD--VVLWSSMIAAYG 149
+Q+HA+ ++ G + V + L+++Y++C + + +T + D +V WS+M++ Y
Sbjct: 146 RQLHAQALRQGLATSAYVQTGLLNLYAKCEQVALA-RTVFDGMAGDKNLVAWSAMVSGYS 204
Query: 150 FHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRL 209
G EA+ LF +M+ E ++VT VS++ AC+ G + G ++ + + L
Sbjct: 205 RVGMVNEALGLFREMQAVGVEPDEVTMVSVISACAKAGALDLG-KWVHAYIDRKGITVDL 263
Query: 210 EHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
E T ++D+ +CG ++ A + M V+ + W ++ H
Sbjct: 264 ELSTALIDMYAKCGLIERARGVFDAM-VEKDTKAWSAMIVGFAIH 307
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 86/188 (45%), Gaps = 10/188 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +DL ++L MY K G + V M ++ AW +I G A +GL ED L +
Sbjct: 258 GITVDLELSTALIDMYAKCGLIERARGVFDAMVEKDTKAWSAMIVGFAIHGLVEDALGLF 317
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M + RP+ +TF+ V+S+C+ + G++ + + G + ++ + R
Sbjct: 318 SRMLELKVRPNNVTFIGVLSACAHSGLVEDGRRYWSIMQNLGIKPSMENYGCMVDLLCRS 377
Query: 121 GCLDDSVKTFLECEYS-DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFE-----ANDV 174
G LDD+ + S + V+W +++ A K I++ E ++ E +
Sbjct: 378 GLLDDAYSFVIGMPVSPNSVIWRTLLVAC----KSSNRIDIAESATKRLLELEPHNPENY 433
Query: 175 TFVSLLYA 182
+S LYA
Sbjct: 434 VLLSNLYA 441
>gi|15226299|ref|NP_178260.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216969|sp|Q9ZVF4.1|PP140_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g01510, mitochondrial; Flags: Precursor
gi|3785980|gb|AAC67327.1| hypothetical protein [Arabidopsis thaliana]
gi|330250369|gb|AEC05463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 584
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 169/451 (37%), Positives = 254/451 (56%), Gaps = 26/451 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF + + L MYMK G L E + M +++++AW +A Q G + L+ +
Sbjct: 139 GFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYF 198
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
N M + D T VS++S+C +L +L G++I+ K ++ V ++ + M+ +C
Sbjct: 199 NKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKC 258
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + F E + +VV WS+MI Y +G EA+ LF M+ + N VTF+ +L
Sbjct: 259 GNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVL 318
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRR--KPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
ACSH GL +G +F LMV+ + +PR EHY C+VDLLGR G L+EA I+ MPV+
Sbjct: 319 SACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVE 378
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
+ IW LL AC H+ + ++A+ ++ P + +VLLSNI+A+A +W V + R
Sbjct: 379 PDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVR 438
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
MR+ KK S +E + ++H F GDKSHP+S I L+E+ +++ GYVPDT
Sbjct: 439 SKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTC 498
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKY 399
+ HD++ EEKE +L HHSEKLAIAF GLI P K+
Sbjct: 499 SVFHDVEMEEKECSLSHHSEKLAIAF-----GLIKGRPGHPIRVMKNLRTCDDCHAFSKF 553
Query: 400 ISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+S + + EII+RD +RFHHFRNG CSC ++W
Sbjct: 554 VSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 102/236 (43%), Gaps = 16/236 (6%)
Query: 20 GSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVI 79
G + +V M + W TL G +N L + L Y MR +G RPD+ T+ V+
Sbjct: 57 GDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVV 116
Query: 80 SSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVV 139
+ S+L G +HA VVK G V + L+ MY + G L + F + D+V
Sbjct: 117 KAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLV 176
Query: 140 LWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLM 199
W++ +A G A+ F +M + + T VS+L AC G E G E +D
Sbjct: 177 AWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYD-- 234
Query: 200 VKKYRRKPRLEHYTCVV-------DLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
+ R E C + D+ +CG + A L M + N + W T++
Sbjct: 235 ------RARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQR-NVVSWSTMI 283
>gi|356545826|ref|XP_003541335.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 607
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 170/478 (35%), Positives = 266/478 (55%), Gaps = 48/478 (10%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D A ++L H+Y GSL + +V M NV++W +L++G +Q GL ++ +
Sbjct: 130 GFGGDTYALNNLIHVYFAFGSLDDARRVFCTMSDPNVVSWTSLVSGYSQWGLVDEAFRVF 189
Query: 61 NLM----------RMVG-------FRP----------------DKITFVSVISSCSELAT 87
LM M+ FR D+ +++S+C+ +
Sbjct: 190 ELMPCKKNSVSWNAMIACFVKGNRFREAFALFRRMRVEKKMELDRFVAATMLSACTGVGA 249
Query: 88 LGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAA 147
L QG IH V K G LD + +++I MY +CGCLD + F + V W+ MI
Sbjct: 250 LEQGMWIHKYVEKTGIVLDSKLATTIIDMYCKCGCLDKAFHVFCGLKVKRVSSWNCMIGG 309
Query: 148 YGFHGKGEEAINLFEQMEQKEFEAND-VTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRK 206
+ HGKGE+AI LF++ME++ A D +TFV++L AC+H GL E+G +F MV +
Sbjct: 310 FAMHGKGEDAIRLFKEMEEEAMVAPDSITFVNVLTACAHSGLVEEGWYYFRYMVDVHGID 369
Query: 207 PRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEE 266
P EHY C+VDLL R G L+EA +I MP+ +A + LL AC+ H + ++ +
Sbjct: 370 PTKEHYGCMVDLLARAGRLEEAKKVIDEMPMSPDAAVLGALLGACRIHGNLELGEEVGNR 429
Query: 267 ILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTM 326
++ ++P+++ YV+L N++AS +W+ V+ R+ M +R VKKEPG S +E++ V++F
Sbjct: 430 VIELDPENSGRYVILGNMYASCGKWEQVAGVRKLMDDRGVKKEPGFSMIEMEGVVNEFVA 489
Query: 327 GDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFA- 385
G + HP + I + E+ +++ G+VPDT +HD+ EE+E L +HSEKLAIA+
Sbjct: 490 GGRDHPLAEAIYAKIYEMLESIRVVGFVPDTDGVLHDLVEEERENPLFYHSEKLAIAYGL 549
Query: 386 -EHTRGLIVML------------PFKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+ RG + + K IS++ + +II+RD SRFHHF NG+CSC DYW
Sbjct: 550 LKTKRGETLRVTKNLRVCKDCHQASKMISKVYDCDIIIRDRSRFHHFSNGECSCKDYW 607
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 121/290 (41%), Gaps = 51/290 (17%)
Query: 18 KSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDV---LDQYNLMRMVGFRPDKIT 74
K G + K+ +P + + TL KA L++ L Y+ M P+ T
Sbjct: 48 KHGDINYALKLFTTLPNPDTFLYNTLF--KAFFSLSQTPSLSLLFYSHMLQHCVTPNAFT 105
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
F S+I +C + +Q+HA V+K G D +++LI +Y G LDD+ + F
Sbjct: 106 FPSLIRACK---LEEEAKQLHAHVLKFGFGGDTYALNNLIHVYFAFGSLDDARRVFCTMS 162
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQME----------------------------- 165
+VV W+S+++ Y G +EA +FE M
Sbjct: 163 DPNVVSWTSLVSGYSQWGLVDEAFRVFELMPCKKNSVSWNAMIACFVKGNRFREAFALFR 222
Query: 166 ----QKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRL----EHYTCVVD 217
+K+ E + ++L AC+ G E+GM + KY K + + T ++D
Sbjct: 223 RMRVEKKMELDRFVAATMLSACTGVGALEQGM-----WIHKYVEKTGIVLDSKLATTIID 277
Query: 218 LLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEI 267
+ +CG LD+A + + VK W ++ H + A R+ +E+
Sbjct: 278 MYCKCGCLDKAFHVFCGLKVK-RVSSWNCMIGGFAMHGKGEDAIRLFKEM 326
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 160/447 (35%), Positives = 257/447 (57%), Gaps = 25/447 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +L ++L +MY K GS+ E V +P++++++W T+I G +QN L + L+ +
Sbjct: 702 GMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELF 761
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ F+PD IT V+ +C+ LA L +G++IH +++ G D+ V +L+ MY++C
Sbjct: 762 LDMQK-QFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKC 820
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L + F D++ W+ MIA YG HG G EAI+ F +M E ++ +F +L
Sbjct: 821 GLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVIL 880
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL +G +FF+ M + +P+LEHY CVVDLL R G L +A I +MP+K +
Sbjct: 881 NACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPD 940
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
IW LLS C+ H +A ++AE I + P + YV+L+N++A A++W+ V + R+
Sbjct: 941 TTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKR 1000
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M++R K+ PG SW+E+ + + F G+ HP++ ID+ L +LT +M+ Y
Sbjct: 1001 MQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKRIDVLLRKLTMQMQNEDYFSMFRYV 1060
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
+ + D EKE HSEK A+AF G++ + P K++S
Sbjct: 1061 LINEDDMEKEMIQCGHSEKSAMAF-----GILNLPPGRTVRVSKNQRVCGDCHEMGKFMS 1115
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGD 428
+ REI++RD++RFHHF++G CSC D
Sbjct: 1116 KTTKREIVLRDSNRFHHFKDGLCSCRD 1142
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 158/311 (50%), Gaps = 7/311 (2%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F ++V ++L MY K G+L +V M +++W + IA + GL D + ++
Sbjct: 602 FSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFD 661
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M+ G RPD T S++ +C+ ++L +G+ +H+ V+K G ++ V ++LI+MY++CG
Sbjct: 662 EMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCG 721
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
++++ F + D+V W++MI Y + EA+ LF M QK+F+ +D+T +L
Sbjct: 722 SVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDM-QKQFKPDDITMACVLP 780
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC-VVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+ +KG E ++++ H C +VD+ +CG L A L +P K +
Sbjct: 781 ACAGLAALDKGREIHGHILRRGYFSDL--HVACALVDMYAKCGLLVLAQLLFDMIP-KKD 837
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEE--ILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
I W +++ H + A E I G+ P +++ V+L+ S +G F
Sbjct: 838 LISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFN 897
Query: 299 EAMRERNVKKE 309
E V+ +
Sbjct: 898 SMRNECGVEPK 908
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 129/250 (51%), Gaps = 2/250 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF + +SL Y K G + + + +V++W ++I G NG + + L+ +
Sbjct: 500 GFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIF 559
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M ++G D T VSV+ + + + L G+ +H VKA S +V ++L+ MYS+C
Sbjct: 560 IQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKC 619
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L+ + + F++ + +V W+S IAAY G +AI LF++M+ K + T S++
Sbjct: 620 GNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIV 679
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
+AC+ +KG + ++K L ++++ +CG ++EA + +PVK +
Sbjct: 680 HACACSSSLDKGRDVHSYVIKN-GMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVK-D 737
Query: 241 AIIWKTLLSA 250
+ W T++
Sbjct: 738 IVSWNTMIGG 747
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 133/293 (45%), Gaps = 13/293 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +D G+ L MY+ G LV+G K+ + V W L++ A+ G + + +
Sbjct: 399 GISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLF 458
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ +G + TF V+ + L + + +++H V+K G + V++SLI+ Y +
Sbjct: 459 KKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKF 518
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMI---AAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
G ++ + F E DVV W+SMI GF G G E +F QM E + T V
Sbjct: 519 GGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLE---IFIQMLILGVEVDLTTLV 575
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
S+L A ++ G G VK + + T ++D+ +CG L+ A + M
Sbjct: 576 SVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNT-LLDMYSKCGNLNGATEVFVKMG- 633
Query: 238 KANAIIWKTLLSA-CKTHKSTDMAGRIAE-EILGVNPQDAAPYVLLSNIHASA 288
+ W + ++A + +D G E + GV P Y + S +HA A
Sbjct: 634 DTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPD---IYTVTSIVHACA 683
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 59/107 (55%)
Query: 74 TFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLEC 133
++ SV+ C+E +L G+++H+ ++ G S+D + + L+ MY CG L K F +
Sbjct: 371 SYCSVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKI 430
Query: 134 EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
V LW+ +++ Y G E+++LF++M++ N TF +L
Sbjct: 431 MNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVL 477
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 161/441 (36%), Positives = 253/441 (57%), Gaps = 24/441 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
+ LDL++ +S+ Y+K + + + MP ++V++W ++I+G AQN L ++ L +
Sbjct: 437 AYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALF 496
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+M GF+PD+ T VSVIS+C+ LA L QG+ +HA + + G +++V + ++LI MY +C
Sbjct: 497 QEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKC 556
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
GC++ +++ F + W+++I +G E ++++F M++ N++TF+ +L
Sbjct: 557 GCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVL 616
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC H GL ++G F M+ ++ +P ++HY C+VDLLGR G L EA L+ MP+ +
Sbjct: 617 GACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPD 676
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
W LL ACK H ++M R+ +++ + P +VLLSNI+AS +W V E R
Sbjct: 677 VATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGM 736
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M + V K PG S +E +H+F GDK+HP I+ L E+ ++KL GY PD
Sbjct: 737 MTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDINEV 796
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPFKYISEIKN--------------- 405
+ D+D EEKE L HSEKLAIAF GLI + P I +KN
Sbjct: 797 LLDVDEEEKESTLFRHSEKLAIAF-----GLINISPPTPIRIMKNLRICNDCHTAAKLIS 851
Query: 406 ----REIIVRDASRFHHFRNG 422
R+I+VRD RFHHF G
Sbjct: 852 KAFCRKIVVRDRHRFHHFEQG 872
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 132/277 (47%), Gaps = 33/277 (11%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E ++A +S+ ++ G +VE K+ M ++++ W LIA QN + E+ + +
Sbjct: 307 ERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVG 366
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M +G D++ VS +S+C+ L + G+ IH+ +K G + + ++LI MYS+CG
Sbjct: 367 MHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGD 426
Query: 123 L------------------DDSVKTFLECEY-------------SDVVLWSSMIAAYGFH 151
+ + + +L+C DVV WSSMI+ Y +
Sbjct: 427 IMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQN 486
Query: 152 GKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEH 211
+E + LF++M+ F+ ++ T VS++ AC+ E+G ++ +K+ +
Sbjct: 487 DLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQG-KWVHAYIKRNGLTINVIL 545
Query: 212 YTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
T ++D+ +CG ++ A + M ++ W L+
Sbjct: 546 GTTLIDMYMKCGCVETALEVFYGM-IEKGISTWNALI 581
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 71/132 (53%), Gaps = 4/132 (3%)
Query: 71 DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTF 130
D T+ +I +CS + + +Q+H V+K G DV V ++LI+ +S C + D+ + F
Sbjct: 212 DNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVF 271
Query: 131 LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKE 190
E D V W+S++A Y G EEA +++ QM ++ A++ S++ GL
Sbjct: 272 NESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASN----SMIVLFGMRGLVV 327
Query: 191 KGMEFFDLMVKK 202
+ + FD M++K
Sbjct: 328 EACKLFDEMLEK 339
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 67/323 (20%), Positives = 129/323 (39%), Gaps = 79/323 (24%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ D+ ++L + + ++ + +V + + ++W +++AG + G E+ Y
Sbjct: 243 GFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIY 302
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M P++ S+I+S +S+I ++
Sbjct: 303 HQM------PER----SIIAS-----------------------------NSMIVLFGMR 323
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + ++ K F E D+V WS++IA + + EEAI F M + ++V VS L
Sbjct: 324 GLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSAL 383
Query: 181 YACSHCGLKEKGMEFFDLMVK-----------------------KYRRKPRLEHYTCVVD 217
AC++ + G L +K RK E Y ++D
Sbjct: 384 SACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAY--LLD 441
Query: 218 LLG---------RCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL 268
L+ +C +D A A+ +MP K + + W +++S + D + +E+
Sbjct: 442 LISWNSMISGYLKCNLVDNAKAIFDSMPEK-DVVSWSSMISGYAQNDLFDETLALFQEMQ 500
Query: 269 --GVNPQDAAPYVLLSNIHASAK 289
G P + L+S I A A+
Sbjct: 501 MSGFKPDETT---LVSVISACAR 520
>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 678
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 159/444 (35%), Positives = 253/444 (56%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G ++ +SL MY K GS+ E V M ++++ W +I G A NGL + ++ +
Sbjct: 235 GLSRNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELF 294
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
MR V RPD V +SSC+ L L G + + + +SLI Y++C
Sbjct: 295 FEMRKVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKC 354
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +++++ + + D V+++++I+ +G+ A +F QM + N+ TFV LL
Sbjct: 355 GSMEEALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLL 414
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
C+H GL + G +F+ M + P +EHY C+VDLL R G+LDEA LI+ MP+KAN
Sbjct: 415 CGCTHAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKAN 474
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
I+W +LL C+ H+ T +A + ++++ + P ++ YVLLSNI+++++RW + R
Sbjct: 475 VIVWGSLLGGCRLHRETQLAEHVLKQLIELEPWNSGHYVLLSNIYSASRRWDEAEKIRST 534
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
+ E+ ++K PG SW+E+ VH+F +GD SHP S +I LE L ++K GY P T
Sbjct: 535 VNEKGMQKLPGYSWVEVDGVVHEFLVGDTSHPLSQKIYEKLESLFKDLKEAGYNPTTEFV 594
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVML--------------PFKYISEIKNR 406
+ D++ EEKE+ L HSEKLA+AFA + G ++ K+IS++ R
Sbjct: 595 LFDVEEEEKEHFLGCHSEKLAVAFALISTGAKYVIRVVKNLRVCGDCHEAIKHISKVTGR 654
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EI++RD +RFH F +G CSC DYW
Sbjct: 655 EIVIRDNNRFHCFSDGACSCRDYW 678
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 136/277 (49%), Gaps = 6/277 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ D+ +++ Y K G L + KV M ++NV++W +I G + G + +D +
Sbjct: 134 GFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVDLF 193
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ G RPD V V+ +C+ L L G+ I + + G S +V V +SL+ MY++C
Sbjct: 194 RGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMYTKC 253
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++++ F D+V WS+MI Y +G EAI LF +M + + V L
Sbjct: 254 GSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVGAL 313
Query: 181 YACSHCGLKEKGMEFFDLM-VKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
+C+ G E G LM +++ P L T ++D +CG ++EA + + M K
Sbjct: 314 SSCASLGALELGNWAKGLMNYEEFLSNPVLG--TSLIDFYAKCGSMEEALGVYKMMKEK- 370
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQD 274
+ +++ ++S + A + ++ G+ P +
Sbjct: 371 DRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNE 407
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 2/215 (0%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
N + T+I G + + Y M PD TF V+ +C+ L G IH
Sbjct: 68 NTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIH 127
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGE 155
+ V K G DV V ++++ YS+CG L D+ K F + +VV W+ MI GK
Sbjct: 128 SLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFR 187
Query: 156 EAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV 215
EA++LF + + + V +L AC+ G E G + D +++ + T +
Sbjct: 188 EAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESG-RWIDRCMRECGLSRNVFVATSL 246
Query: 216 VDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
VD+ +CG ++EA + M V+ + + W ++
Sbjct: 247 VDMYTKCGSMEEARFVFDGM-VEKDIVCWSAMIQG 280
>gi|297744892|emb|CBI38389.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 170/453 (37%), Positives = 263/453 (58%), Gaps = 28/453 (6%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMP----IRNVIAWITLIAGKAQNGLAEDV 56
GF + + + +Y K G L + +V MP ++ + W +I G +N
Sbjct: 167 GFSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEETNRA 226
Query: 57 LDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISM 116
L+ + M+ RP++ T V V+S+CS+L L G+ +H+ + K L++ V ++LI+M
Sbjct: 227 LEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINM 286
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
YSRCG +D++ F E + DV+ +++MI+ +GK +AI LF M + +VTF
Sbjct: 287 YSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTF 346
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
V +L ACSH GL + G E F M + YR +P++EHY C+VDLLGR G L+EA LIR M
Sbjct: 347 VGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMK 406
Query: 237 VKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSE 296
+ + I+ TLLSACK HK+ ++ ++A+E+ D+ YVLLS+++AS+ +W+ ++
Sbjct: 407 MTPDHIMLGTLLSACKMHKNLELGEQVAKELEDRGQADSGTYVLLSHVYASSGKWKEAAQ 466
Query: 297 FREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPD 356
R M+E ++KEPG S +E+ N++H+F +GD HP+ I LEEL ++L GY P+
Sbjct: 467 VRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPQKERIYEKLEELNRLLRLEGYHPE 526
Query: 357 TGADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------F 397
+ D++ EKE+ L HSE+LAI + GLI P
Sbjct: 527 KEVVLQDIEDGEKEWALAMHSERLAICY-----GLISTEPCTMIRVMKNLRVCYDCHSAI 581
Query: 398 KYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
K I++I R+I+VRD +RFH+F NG CSCGDYW
Sbjct: 582 KLIAKITRRKIVVRDRNRFHYFENGACSCGDYW 614
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 109/238 (45%), Gaps = 6/238 (2%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
NV + LI G +G + + Y+ M PD S++ +C L +G+++H
Sbjct: 101 NVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVH 160
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE----YSDVVLWSSMIAAYGFH 151
+ +K G S + V ++ +Y +CG L D+ + F E D V W++MI + +
Sbjct: 161 SRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRN 220
Query: 152 GKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEH 211
+ A+ F M+ + N+ T V +L ACS G E G M +K+ + L
Sbjct: 221 EETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYM-RKFEIELNLFV 279
Query: 212 YTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILG 269
++++ RCG +DEA + M + + I + T++S + + A + ++G
Sbjct: 280 GNALINMYSRCGSIDEAQTVFDEMKDR-DVITYNTMISGLSMNGKSRQAIELFRVMVG 336
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 93/204 (45%), Gaps = 9/204 (4%)
Query: 78 VISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSD 137
+IS + Q IHA++++ G S D ++ L+ S+C +D + + F +
Sbjct: 42 IISLLQRSRHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPN 101
Query: 138 VVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC-SHCGLKEKGMEFF 196
V L++++I + G EAI L+ +M + ++ S+L AC S L+E G E
Sbjct: 102 VYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALRE-GREVH 160
Query: 197 DLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP---VKANAIIWKTLLSACKT 253
+K RL +++L G+CG L +A + MP V + + W ++
Sbjct: 161 SRALKLGFSSNRLVRLR-IMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVR 219
Query: 254 HKSTDMAGRIAEEILGVNPQDAAP 277
++ T+ R E G+ ++ P
Sbjct: 220 NEETN---RALEAFRGMQGENVRP 240
>gi|242055643|ref|XP_002456967.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
gi|241928942|gb|EES02087.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
Length = 785
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 162/449 (36%), Positives = 254/449 (56%), Gaps = 27/449 (6%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F D GS+L +Y SG + +G + R +P ++++ W ++I+G QN L E L +
Sbjct: 344 FHDDDYIGSALIDLYSDSGCMEDGYRCFRSLPKQDIVTWTSMISGCVQNELFEKALRLFQ 403
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
G +PD T SV+++C+ LA G+QI +K G + + +S I M +R G
Sbjct: 404 ESICYGLKPDLFTMSSVMNACASLAVARTGEQIQCLAIKYGFNRFTAMGNSFIHMCARSG 463
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+D + F E E DVV WS++I+++ HG +A+ +F +M + N+VTF+++L
Sbjct: 464 DVDAVTRRFQEMESRDVVSWSAVISSHAQHGCARDALRIFNEMMNAKVAPNEVTFLNVLT 523
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
ACSH GL + G+ ++++M +Y P ++H TCVVDLLGR G L +A A IR+ +A
Sbjct: 524 ACSHGGLVDDGLRYYEIMKNEYGLSPTIKHVTCVVDLLGRAGRLADAEAFIRDSAFHDDA 583
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
++W++LL++C+ H + +A++I+ + P +A YV+L N++ A S+ R+ M
Sbjct: 584 VVWRSLLASCRIHGDMERGQLVADQIMDLEPTSSASYVILYNMYLDAGELSLASKTRDLM 643
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
+ER VKKEPG+SW+E+++ VH F GDKSHP S I L E+ S+++ +
Sbjct: 644 KERGVKKEPGLSWIELRSGVHSFVAGDKSHPESNAIYKKLAEMLSKIEKLANTDNASTGS 703
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP--------------------FKYIS 401
+ S E+ + HSEK+A+AF ++ LP K IS
Sbjct: 704 DGISSSEQNL-VGCHSEKIAVAFG------MIHLPQSAPIRVMKNLRVCRDCHSTMKLIS 756
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+NREII+RD RFHHFR G CSCGDYW
Sbjct: 757 GSENREIILRDGIRFHHFRGGSCSCGDYW 785
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 134/290 (46%), Gaps = 10/290 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLA------E 54
G + DL S++ MY K G+L + + +P NVI + +IAG ++ A
Sbjct: 236 GLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKEVSR 295
Query: 55 DVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLI 114
+ L Y+ M+ G +P + TF S++ +C+ G G+QIH +V+K D + S+LI
Sbjct: 296 EALSLYSEMQSRGMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIGSALI 355
Query: 115 SMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDV 174
+YS GC++D + F D+V W+SMI+ + E+A+ LF++ + +
Sbjct: 356 DLYSDSGCMEDGYRCFRSLPKQDIVTWTSMISGCVQNELFEKALRLFQESICYGLKPDLF 415
Query: 175 TFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRN 234
T S++ AC+ + G E + KY + + R G +D +
Sbjct: 416 TMSSVMNACASLAVARTG-EQIQCLAIKYGFNRFTAMGNSFIHMCARSGDVDAVTRRFQE 474
Query: 235 MPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNI 284
M + + + W ++S+ H A RI E++ N + A V N+
Sbjct: 475 MESR-DVVSWSAVISSHAQHGCARDALRIFNEMM--NAKVAPNEVTFLNV 521
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 141/275 (51%), Gaps = 16/275 (5%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+SLA MY G + E +V + ++W +L++G + G E+ L ++LM G
Sbjct: 142 NSLASMYASCGEMGEARRVFDAAEEHDDVSWNSLLSGYVRAGAREETLKVFSLMCHHGLG 201
Query: 70 PDKITFVSVISSCSELATLGQ--GQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSV 127
+ S+I C+ + +G+ + +H VVKAG D+ + S++I MY++ G L ++V
Sbjct: 202 WNSFALGSIIKCCASGSDVGRHIAEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAV 261
Query: 128 KTFLECEYSDVVLWSSMIAAY----GFHGK--GEEAINLFEQMEQKEFEANDVTFVSLLY 181
F +V+++++MIA + GK EA++L+ +M+ + + ++ TF S+L
Sbjct: 262 ALFKSVPDPNVIVFNAMIAGFCRDEAAVGKEVSREALSLYSEMQSRGMQPSEFTFSSILR 321
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY--TCVVDLLGRCGYLDEAAALIRNMPVKA 239
AC+ G G + ++K + Y + ++DL G +++ R++P K
Sbjct: 322 ACNLAGEFGFGKQIHGQVLKHSFHD---DDYIGSALIDLYSDSGCMEDGYRCFRSLP-KQ 377
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNP 272
+ + W +++S C ++ + A R+ +E + G+ P
Sbjct: 378 DIVTWTSMISGCVQNELFEKALRLFQESICYGLKP 412
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 147/331 (44%), Gaps = 18/331 (5%)
Query: 13 AHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV-GFRPD 71
A+ + G+ + ++I MP RN +++ LI+ ++ GL L+ + R G R D
Sbjct: 43 AYCRLGVGAPLHAARLIDEMPRRNAVSYNLLISSYSRAGLPGRALETFARARAAAGLRVD 102
Query: 72 KITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFL 131
+ T+ + +++CS L G+ +HA V G V + +SL SMY+ CG + ++ + F
Sbjct: 103 RFTYAAALAACSRALDLRTGKAVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFD 162
Query: 132 ECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC-SHCGLKE 190
E D V W+S+++ Y G EE + +F M N S++ C S +
Sbjct: 163 AAEEHDDVSWNSLLSGYVRAGAREETLKVFSLMCHHGLGWNSFALGSIIKCCASGSDVGR 222
Query: 191 KGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
E V K L + ++D+ + G L A AL +++P N I++ +++
Sbjct: 223 HIAEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVP-DPNVIVFNAMIAG 281
Query: 251 -CKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKE 309
C+ + + ++ E L L S + + + + F +R N+ E
Sbjct: 282 FCRDEAA--VGKEVSREALS----------LYSEMQSRGMQPSEFT-FSSILRACNLAGE 328
Query: 310 PGVSWLEIKNQVHQFTMGDKSHPRSMEIDLY 340
G +I QV + + D + S IDLY
Sbjct: 329 FGFGK-QIHGQVLKHSFHDDDYIGSALIDLY 358
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 87/171 (50%), Gaps = 4/171 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF G+S HM +SG + + + M R+V++W +I+ AQ+G A D L +
Sbjct: 444 GFNRFTAMGNSFIHMCARSGDVDAVTRRFQEMESRDVVSWSAVISSHAQHGCARDALRIF 503
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA--GASLDVGVISSLISMYS 118
N M P+++TF++V+++CS + G + + E++K G S + ++ ++ +
Sbjct: 504 NEMMNAKVAPNEVTFLNVLTACSHGGLVDDGLRYY-EIMKNEYGLSPTIKHVTCVVDLLG 562
Query: 119 RCGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE 168
R G L D+ + + D V+W S++A+ HG E + +Q+ E
Sbjct: 563 RAGRLADAEAFIRDSAFHDDAVVWRSLLASCRIHGDMERGQLVADQIMDLE 613
>gi|357119334|ref|XP_003561397.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Brachypodium distachyon]
Length = 635
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 161/445 (36%), Positives = 251/445 (56%), Gaps = 24/445 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+V +++ Y+++G + +V MP+R+ ++W TL+ G + G + L + M
Sbjct: 196 DVVTWNAVLAGYVRAGMVRAAREVFEEMPVRDEVSWSTLVGGYVKEGELDVALGVFRDMV 255
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G R ++ V+ +S+ +++ L G+ +H V + G + V V ++L+ M+S+CGC+
Sbjct: 256 EKGVRVNEAAVVTALSAAAQMGLLEHGRFVHEVVQRTGMPVSVNVGAALVDMFSKCGCVA 315
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ + F DV W++MI HG G++A+ LF + + D+TFV +L ACS
Sbjct: 316 VAREVFDGMPRRDVFAWNAMICGLASHGLGQDAVELFWRFLDEGLWPTDITFVGVLNACS 375
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
CGL +G +F LMV KYR +P +EHY C+VDLLGR G + EA LI M + + ++W
Sbjct: 376 RCGLVAEGRRYFKLMVDKYRIEPEMEHYGCMVDLLGRAGLVSEAIELIEGMHIAPDPVLW 435
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
T+LSACKTH D+ + +++ + P YVLL++I+A AK+W V E R+ M R
Sbjct: 436 GTVLSACKTHNLVDLGITVGNKLIELEPAHDGHYVLLASIYAKAKKWDEVREVRKLMSSR 495
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
K G S +E + +H+F +GD H S++I L+ + + GYVPD + +HD+
Sbjct: 496 GTGKSAGWSLMEAQGNLHKFLVGDMDHKDSVQIYNMLDMINRRLADAGYVPDVSSVLHDI 555
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVM---LPF----------------KYISEIKN 405
EEK + +K HSE+LAIA+ G IV P K ++++ N
Sbjct: 556 GDEEKVHAIKVHSERLAIAY-----GFIVTEVGSPIRIVKNLQVCGDCHEFSKMVTKVFN 610
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
REIIVRD SRFHH + GKCSC DYW
Sbjct: 611 REIIVRDGSRFHHMKEGKCSCLDYW 635
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 89/181 (49%), Gaps = 3/181 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + + G++L M+ K G + +V MP R+V AW +I G A +GL +D ++ +
Sbjct: 293 GMPVSVNVGAALVDMFSKCGCVAVAREVFDGMPRRDVFAWNAMICGLASHGLGQDAVELF 352
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVV-KAGASLDVGVISSLISMYSR 119
G P ITFV V+++CS + +G++ +V K ++ ++ + R
Sbjct: 353 WRFLDEGLWPTDITFVGVLNACSRCGLVAEGRRYFKLMVDKYRIEPEMEHYGCMVDLLGR 412
Query: 120 CGCLDDSVKTFLECEYS-DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
G + ++++ + D VLW ++++A H + I + ++ + E A+D +V
Sbjct: 413 AGLVSEAIELIEGMHIAPDPVLWGTVLSACKTHNLVDLGITVGNKLIELE-PAHDGHYVL 471
Query: 179 L 179
L
Sbjct: 472 L 472
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 79/196 (40%), Gaps = 34/196 (17%)
Query: 91 GQQIHAEVVKAGASLDVGVISSLISMYSRCG-------CLDD------------------ 125
G +HA VKAGA+ D+ V ++L Y CG D+
Sbjct: 149 GSHVHALAVKAGAAGDLYVRNALTHFYGVCGDVGAMRTVFDELPRVRDVVTWNAVLAGYV 208
Query: 126 -------SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+ + F E D V WS+++ Y G+ + A+ +F M +K N+ V+
Sbjct: 209 RAGMVRAAREVFEEMPVRDEVSWSTLVGGYVKEGELDVALGVFRDMVEKGVRVNEAAVVT 268
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
L A + GL E G F +V++ + +VD+ +CG + A + MP +
Sbjct: 269 ALSAAAQMGLLEHG-RFVHEVVQRTGMPVSVNVGAALVDMFSKCGCVAVAREVFDGMP-R 326
Query: 239 ANAIIWKTLLSACKTH 254
+ W ++ +H
Sbjct: 327 RDVFAWNAMICGLASH 342
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 162/445 (36%), Positives = 252/445 (56%), Gaps = 30/445 (6%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E D+V+ +S+ + + G++ + + M +NVI W ++ Q+G ED L YN+
Sbjct: 434 EKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNV 493
Query: 63 M-RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M RPD +T+V++ C++L G QI VK G LD V +++I+MYS+CG
Sbjct: 494 MLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCG 553
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+ ++ K F D+V W++MI Y HG G++AI +F+ + ++ + + +++V++L
Sbjct: 554 RILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLS 613
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
CSH GL ++G +FD+M + + P LEH++C+VDLLGR G+L EA LI MP+K A
Sbjct: 614 GCSHSGLVQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTA 673
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
+W LLSACK H + ++A A+ + ++ D+ Y+L++ I+A A + ++ R+ M
Sbjct: 674 EVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLM 733
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
R++ +KK PG SW+E+ N+VH F D SHP+ + I L+EL ++ GYV
Sbjct: 734 RDKGIKKNPGYSWMEVNNKVHVFKADDVSHPQVIAIRKKLDELMEKIARLGYVR------ 787
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP----------------FKYISEIKN 405
DS E HHSEKLA+AF L +P K IS +
Sbjct: 788 --TDSPRSEI---HHSEKLAVAFG--LMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTG 840
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
RE ++RDA RFHHF G CSCGDYW
Sbjct: 841 REFVIRDAVRFHHFNGGSCSCGDYW 865
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 147/346 (42%), Gaps = 44/346 (12%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
+D S+L +Y K G E + V + RN +AW LIAG Q+G + ++ +N M
Sbjct: 303 IDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQM 362
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
R D+ ++IS C L G+Q+H+ +K+G V V +SLISMY++C L
Sbjct: 363 RAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNL 422
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
+ F D+V W+SMI A+ G +A F+ M K N +T+ ++L A
Sbjct: 423 QSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTK----NVITWNAMLGAY 478
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHY------------------------------- 212
G +E G+ +++M+ + +P Y
Sbjct: 479 IQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILD 538
Query: 213 ----TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL 268
V+ + +CG + EA + + VK + + W +++ H A I ++IL
Sbjct: 539 TSVANAVITMYSKCGRILEARKVFDFLNVK-DIVSWNAMITGYSQHGMGKQAIEIFDDIL 597
Query: 269 --GVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGV 312
G P + +LS S +G S F R N+ PG+
Sbjct: 598 KRGAKPDYISYVAVLSGCSHSGLVQEGKSYFDMMKRVHNI--SPGL 641
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 121/235 (51%), Gaps = 2/235 (0%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y+K+ + ++ MP R+V++W +++ +Q+G + LD M+ G R D T+
Sbjct: 214 YVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTY 273
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
S +++C+ L++L G+Q+HA+V++ +D V S+L+ +Y++CGC ++ F
Sbjct: 274 TSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHD 333
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
+ V W+ +IA + HG E++ LF QM + + +L+ C G +
Sbjct: 334 RNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQL 393
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
L +K + + + + ++ + +C L A ++ R M K + + W ++++A
Sbjct: 394 HSLCLKSGQIQAVVVSNS-LISMYAKCDNLQSAESIFRFMNEK-DIVSWTSMITA 446
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 117/273 (42%), Gaps = 38/273 (13%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVG-FRPDKIT 74
Y+K G L + ++ MP R+V +W TL++G Q+ L+ + M G P+ T
Sbjct: 81 YVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFT 140
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLE-- 132
F + SC L Q+ V K G+ D V ++L+ M+ RCG +D + + F+
Sbjct: 141 FAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRIK 200
Query: 133 -----CEYS------------------------DVVLWSSMIAAYGFHGKGEEAINLFEQ 163
C S DVV W+ M++A G+ EA+++
Sbjct: 201 EPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVD 260
Query: 164 MEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY--TCVVDLLGR 221
M+ K + T+ S L AC+ G + L + R P ++ Y + +V+L +
Sbjct: 261 MQSKGVRLDSTTYTSSLTACARLSSLRWGKQ---LHAQVIRNLPCIDPYVASALVELYAK 317
Query: 222 CGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
CG EA + ++ + N + W L++ H
Sbjct: 318 CGCFKEAKGVFNSLHDR-NNVAWTVLIAGFLQH 349
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 85/160 (53%), Gaps = 4/160 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G LD +++ MY K G ++E KV + ++++++W +I G +Q+G+ + ++ +
Sbjct: 534 GLILDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIF 593
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV--ISSLISMYS 118
+ + G +PD I++V+V+S CS + +G+ + +++K ++ G+ S ++ +
Sbjct: 594 DDILKRGAKPDYISYVAVLSGCSHSGLVQEGKS-YFDMMKRVHNISPGLEHFSCMVDLLG 652
Query: 119 RCGCLDDSVKTFLECEYSDVV-LWSSMIAAYGFHGKGEEA 157
R G L ++ E +W ++++A HG E A
Sbjct: 653 RAGHLTEAKDLIDEMPMKPTAEVWGALLSACKIHGNNELA 692
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 83/190 (43%), Gaps = 32/190 (16%)
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFL-EC 133
F + SC L + +H +V G + V + ++L+ Y CG L D+ + L +
Sbjct: 7 FADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRLLLTDI 66
Query: 134 EYSDVVLWSSMIAAYGFHGKGEEAINLFEQM----------------EQKEFEANDVTFV 177
+ +V+ + M+ Y G+ +A+ LF +M + +++ A+ +FV
Sbjct: 67 AHPNVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFV 126
Query: 178 SL-------------LYACSHCG-LKEKGMEFFDL-MVKKYRRKPRLEHYTCVVDLLGRC 222
S+ YA CG L E+ + L MV+K+ + + +VD+ RC
Sbjct: 127 SMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRC 186
Query: 223 GYLDEAAALI 232
G +D A+ L
Sbjct: 187 GTVDLASRLF 196
>gi|7488184|pir||E71401 probable selenium-binding protein - Arabidopsis thaliana
Length = 1070
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 171/447 (38%), Positives = 250/447 (55%), Gaps = 41/447 (9%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
+ ++ +++ Y KSG E ++ R++P++N+ +W LI+G Q+G + + MR
Sbjct: 107 NTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMR 166
Query: 65 MVGFRP-DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
D + S++ +C+ LA G+Q+H ++LI MY++C +
Sbjct: 167 RERVDILDPLVLSSIVGACANLAASIAGRQVHG--------------NALIDMYAKCSDV 212
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
+ F + DVV W+S+I HG+ E+A+ L++ M + N+VTFV L+YAC
Sbjct: 213 IAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYAC 272
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
SH G EKG E F M K Y +P L+HYTC++DLLGR G LDEA LI MP +
Sbjct: 273 SHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPT 332
Query: 244 WKTLLSACKTHKSTDMAGRIAEEIL-GVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMR 302
W LLSACK M RIA+ ++ +D + Y+LLSNI+ASA W VSE R +
Sbjct: 333 WAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLG 392
Query: 303 ERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLR-GYVPDTGADM 361
E V+K+PG S +E++ + F G+ SHP +I L++L EM++R GYVPDT +
Sbjct: 393 EMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWIL 452
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISE 402
HDMD +EKE L HSE+ A+A+ GL+ +P K+ISE
Sbjct: 453 HDMDEQEKEKLLFWHSERSAVAY-----GLLKAVPGTPIRIVKNLRVCGDCHVVLKHISE 507
Query: 403 IKNREIIVRDASRFHHFRNGKCSCGDY 429
I REIIVRDA+R+HHF+ GKCSC D+
Sbjct: 508 ITEREIIVRDATRYHHFKGGKCSCNDF 534
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 104/213 (48%), Gaps = 11/213 (5%)
Query: 32 MPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVG-FRPDKITFVSVISSCSELATLGQ 90
MP R+ IAW +++ Q L+ L ++ + RPD F +++ +C+ L ++
Sbjct: 1 MPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDH 60
Query: 91 GQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGF 150
G+Q+H + + + D V SSL+ MY++CG L+ + F + + W++M++ Y
Sbjct: 61 GRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAK 120
Query: 151 HGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLE 210
G+ EEA+ LF + K N ++ +L+ G KG+E F + + R + +
Sbjct: 121 SGRKEEALELFRILPVK----NLYSWTALISGFVQSG---KGLEAFSVFTEMRRERVDIL 173
Query: 211 HYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
+ ++G C L AA I V NA+I
Sbjct: 174 DPLVLSSIVGACANL---AASIAGRQVHGNALI 203
>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
Length = 653
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 163/447 (36%), Positives = 257/447 (57%), Gaps = 18/447 (4%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
+ ++ +L +Y+K G L +V + ++VI+W LI G AQ G + ++ +
Sbjct: 207 YSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTALILGYAQEGNLAESMELFR 266
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
+R + D S++ ++ A + QG+Q+HA +K + +D+ V +S++ MY +CG
Sbjct: 267 QLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVPSGVDISVCNSILDMYLKCG 326
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
++++ + F E +V+ W+ MI YG HG G+EAI LF++M+ E +DVT++++L
Sbjct: 327 MINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFDEMQLDSTEPDDVTYLAVLL 386
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
CSH GL EKG E+F + + K R+EHY C+VDLLGR G L EA L+ +MP++AN
Sbjct: 387 GCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMVDLLGRAGRLKEAKNLVDSMPLEANV 446
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
IW+TLLSAC+ H ++ + +L ++ ++ YV++SNI+A A W+ RE +
Sbjct: 447 GIWQTLLSACRVHGDLELGKEVGGILLRLDSENPVNYVMMSNIYADAGYWKECERIRELV 506
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLR-GYVPDTGAD 360
+ + +KKE G SW+EI +VH F GD +HP + +I L+E+ MK GYV
Sbjct: 507 KSKKLKKEAGRSWVEIDKEVHFFYGGDDTHPLTEKIHEILKEMERRMKEELGYVYGVKYA 566
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA------EHTRGLIVMLP-----------FKYISEI 403
+HD++ E K NL+ HSEKLAI A E R +I + K +S+I
Sbjct: 567 LHDVEEESKMDNLRVHSEKLAIGLALVCGGLEEGRKVIRVFKNLRVCGDCHEFIKGLSKI 626
Query: 404 KNREIIVRDASRFHHFRNGKCSCGDYW 430
+VRDA+RFH F +G CSC DYW
Sbjct: 627 LRVVFVVRDANRFHRFEDGLCSCRDYW 653
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 126/249 (50%), Gaps = 2/249 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF DL+ + L MY K G L V M RNV++W L+ G QNG + L +
Sbjct: 2 GFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLF 61
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M + G +P+ TF + + +C L L G+QIH VK G + V +S+I MYS+C
Sbjct: 62 SKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKC 121
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++++ F +++ W++MIA Y G E+A+ LF++M++ ++ TF S L
Sbjct: 122 GRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTL 181
Query: 181 YACSHCGLKEKGMEFFDLMVK-KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
ACS G ++G + ++ + ++DL +CG L A + ++ K
Sbjct: 182 KACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEK- 240
Query: 240 NAIIWKTLL 248
+ I W L+
Sbjct: 241 HVISWTALI 249
>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 939
Score = 311 bits (797), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 151/374 (40%), Positives = 231/374 (61%), Gaps = 3/374 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G LD G +L MY K G + E +K+ + + +++W +IAG +ED +
Sbjct: 509 GLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFF 568
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M + +PD T+ V+ +C+ LA++G G+QIH +++K DV + S+L+ MYS+C
Sbjct: 569 YEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITSTLVDMYSKC 628
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + DS F + D V W++MI Y HG GEEA+ FE+M+ + N TFVS+L
Sbjct: 629 GNMQDSALVFEKAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHATFVSIL 688
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+H G +KG+ +F+ M+ +Y +P++EHY+C++D++GR G + EA LI+ MP +A+
Sbjct: 689 RACAHMGFIDKGLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLIQEMPFEAD 748
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A+IW+TLLS CK H + ++A + IL + P+D++ +LLSNI+A A W VSE R+
Sbjct: 749 AVIWRTLLSICKIHGNIEIAEKATNAILQLEPEDSSACILLSNIYADAGMWGKVSEMRKM 808
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
MR +KKEPG SW+E+K++VH F +G+K+HPR EI L L EMK GY+PD
Sbjct: 809 MRYNKLKKEPGCSWIEVKDEVHAFLVGNKTHPRYEEIYKILSVLLDEMKWIGYIPDID-- 866
Query: 361 MHDMDSEEKEYNLK 374
+D E +EY K
Sbjct: 867 -FLIDEESEEYEQK 879
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 129/265 (48%), Gaps = 9/265 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
++ +S+ MY K +L E + M R+ ++W +IA QNG E+ L+ + M
Sbjct: 412 NICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASML 471
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+ PD+ T+ SV+ +CS L G +IH ++K+G LD V +LI MY +CG ++
Sbjct: 472 RLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIE 531
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
++ K E +V W+++IA + E+A + F +M + + ++ T+ +L AC+
Sbjct: 532 EAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACA 591
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
+ G + ++ K + + +VD+ +CG + ++A + P K + + W
Sbjct: 592 NLASVGLGKQIHGQII-KLELHSDVYITSTLVDMYSKCGNMQDSALVFEKAPNK-DFVTW 649
Query: 245 KTLLSACKTHKSTDMAGRIAEEILG 269
++ H + EE LG
Sbjct: 650 NAMICGYAQHG-------LGEEALG 667
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 121/250 (48%), Gaps = 2/250 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D+V GS+L MY K L + K+ +P++N + W +IAG QN L+ +
Sbjct: 206 GFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELF 265
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ VG + + SV SC+ L+ L G Q+HA +K D+ V ++ + MY++C
Sbjct: 266 KEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKC 325
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L D+ + F + ++++I + KG EA+ F+ + + N+++
Sbjct: 326 GSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAF 385
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+ G + L VK R + ++D+ G+C L EA + M + +
Sbjct: 386 SACASIKGDLDGRQLHSLSVKSTLR-SNICVANSILDMYGKCEALSEACCMFDEME-RRD 443
Query: 241 AIIWKTLLSA 250
A+ W +++A
Sbjct: 444 AVSWNAVIAA 453
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 139/284 (48%), Gaps = 8/284 (2%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F D+ G++ MY K GSL + +++ +P ++ + +I G +N + L +
Sbjct: 308 FGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQ 367
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
L+ G ++I+ S+C+ + G+Q+H+ VK+ ++ V +S++ MY +C
Sbjct: 368 LLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCE 427
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
L ++ F E E D V W+++IAA+ +G EE +NLF M + E + T+ S+L
Sbjct: 428 ALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLK 487
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYT--CVVDLLGRCGYLDEAAALIRNMPVKA 239
ACS GME + ++K L+ + ++D+ +CG ++EA I + +
Sbjct: 488 ACSSQQALNSGMEIHNRIIKS---GLGLDSFVGGALIDMYCKCGMIEEAKK-IHDRIEQQ 543
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLL 281
+ W +++ K ++ A E+L V P + ++L
Sbjct: 544 TMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVL 587
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 122/246 (49%), Gaps = 10/246 (4%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM- 63
D+++ +++ Y +G + + P R+V++W ++++G QNG +D + M
Sbjct: 108 DVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFLDMG 167
Query: 64 --RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
VGF D+ TF V+ +CS L G G Q+H +V+ G DV S+L+ MY++C
Sbjct: 168 RSEEVGF--DQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKCK 225
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
LDDS+K F E + V WS++IA + + + LF++M++ + + S+
Sbjct: 226 RLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVFR 285
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA-- 239
+C+ + G + + K + T +D+ +CG L +A + ++P +
Sbjct: 286 SCAGLSALKVGTQLHAHAL-KCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQ 344
Query: 240 --NAII 243
NAII
Sbjct: 345 CYNAII 350
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 35/215 (16%)
Query: 70 PDKI-TFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
P KI TF +I CS+ +L G+Q HA ++ +G DV + + L+ MY RC L+ + K
Sbjct: 40 PTKIRTFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYK 99
Query: 129 TFLECEYSDVVLWSSMIAAY-----------------------------GFHGKGE--EA 157
F + DV+ +++MI+ Y GF GE ++
Sbjct: 100 VFEKMSQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKS 159
Query: 158 INLFEQM-EQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVV 216
I++F M +E + TF +L ACS G++ L+V+ K + + ++
Sbjct: 160 IDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTG-SALL 218
Query: 217 DLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSAC 251
D+ +C LD++ + +PVK N + W +++ C
Sbjct: 219 DMYAKCKRLDDSLKIFSEIPVK-NWVCWSAIIAGC 252
>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
Length = 665
Score = 311 bits (797), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 162/414 (39%), Positives = 239/414 (57%), Gaps = 24/414 (5%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
NV++W +++A QNG + ++ + M+ G P+ +T V+ + + +A L G+ H
Sbjct: 257 NVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLPAFANVAALMHGRSAH 316
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGE 155
++ G DV V S+L+ MY++CG + D+ F +VV W++MI Y +G+
Sbjct: 317 CFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSRNVVSWNAMIGGYAMYGEAV 376
Query: 156 EAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV 215
A+ +F M + + + + VTF LL AC+ GL E+G +F M +Y PR+EHY C+
Sbjct: 377 NAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEEGRHYFKEMHNEYGVSPRMEHYACM 436
Query: 216 VDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDA 275
V LLGR G LDEA LI +MP + +A IW +LL +C+ H + D+A AE++ + P++A
Sbjct: 437 VTLLGRAGKLDEAYDLISDMPFEPDAYIWGSLLGSCRVHGNVDLAEVAAEKLFHLEPENA 496
Query: 276 APYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSM 335
YVLLSNI+AS K W V+ RE M++ +KKE G SW+EIKN+VH GD SHP
Sbjct: 497 GNYVLLSNIYASKKMWDRVNRVREMMKDVGLKKEKGCSWIEIKNKVHMLLAGDDSHPMMT 556
Query: 336 EIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVML 395
I + +L +M+ G+VP T +HD++ +EK+ L HSEKLA+A GLI
Sbjct: 557 AIIEKINQLNIQMRKLGFVPSTDFVLHDVEEQEKDDILAVHSEKLAVAL-----GLISTS 611
Query: 396 P-------------------FKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
P K+IS + REI VRD +RFHHF GKCSCGD+W
Sbjct: 612 PGTTLRVIKNLRICGDCHEAMKFISSFEGREISVRDTNRFHHFSGGKCSCGDFW 665
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 85/165 (51%), Gaps = 1/165 (0%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF-RPDKITFVSVISSCSELATLGQGQQI 94
NVI W L++G ++G A D + M G RPD +S+ ++ + GQQ+
Sbjct: 120 NVITWNGLVSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQL 179
Query: 95 HAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKG 154
H VKAG D V+++LI MY +CG + V+ F E + DV +++IA + +
Sbjct: 180 HGYAVKAGCRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQV 239
Query: 155 EEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLM 199
EA+ LF++ + E N V++ S++ C G + +EFF M
Sbjct: 240 CEALRLFKEFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREM 284
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 90/185 (48%), Gaps = 3/185 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D+ S+L MY K G + + + M RNV++W +I G A G A + + +
Sbjct: 323 GFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSRNVVSWNAMIGGYAMYGEAVNAVWMF 382
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEV-VKAGASLDVGVISSLISMYSR 119
+ M +PD +TF ++++C++ +G+ E+ + G S + + ++++ R
Sbjct: 383 HSMLKCKQKPDMVTFTCLLAACTQAGLTEEGRHYFKEMHNEYGVSPRMEHYACMVTLLGR 442
Query: 120 CGCLDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFE-ANDVTFV 177
G LD++ + + D +W S++ + HG + A E++ E E A + +
Sbjct: 443 AGKLDEAYDLISDMPFEPDAYIWGSLLGSCRVHGNVDLAEVAAEKLFHLEPENAGNYVLL 502
Query: 178 SLLYA 182
S +YA
Sbjct: 503 SNIYA 507
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 111/268 (41%), Gaps = 21/268 (7%)
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
++ +R V F PD + SC TL + +HA +G + D V SSL+ Y R
Sbjct: 8 HHFLRHVSFPPDPHLLPTAFKSCP---TLPLARALHAVAEVSGLARDPFVASSLLHAYLR 64
Query: 120 CGCLDDSVKTF--LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQK-EFEANDVTF 176
G ++ F + VV WS+++AA+ G E A L E+M + E N +T+
Sbjct: 65 LGTTGNARALFDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVITW 124
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
L+ + G + M + +P +C + +G G + L
Sbjct: 125 NGLVSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQL-HGYA 183
Query: 237 VKANAIIWKTLLSACKTHKSTDMAGRI--AEEILGVNPQD-----AAPYVLLSNIHASAK 289
VKA AC DM G+ A E++ V + A+ L++ + +A+
Sbjct: 184 VKAGC-----RADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQ 238
Query: 290 RWQGVSEFREAMRERNVKKEPGVSWLEI 317
+ + F+E + +R V+ VSW I
Sbjct: 239 VCEALRLFKEFV-DRGVELNV-VSWTSI 264
>gi|302753382|ref|XP_002960115.1| hypothetical protein SELMODRAFT_70183 [Selaginella moellendorffii]
gi|300171054|gb|EFJ37654.1| hypothetical protein SELMODRAFT_70183 [Selaginella moellendorffii]
Length = 653
Score = 311 bits (797), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 171/450 (38%), Positives = 252/450 (56%), Gaps = 25/450 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ D ++L MY + GSL + + + + AW T++A AQ +D L Y
Sbjct: 209 GFDRDFAMQNNLISMYTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFLY 268
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M + GF PD+ TF SV+ SC+ L L +G+ IH G DV + ++L++MY++C
Sbjct: 269 KNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALVNMYAKC 328
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L D+ K+F DVV WS+MIAA HG EEA+ L M + N+VT S+L
Sbjct: 329 GSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNEVTASSVL 388
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
+ACSH G +G+++F + + + + E+ +DLLGR G+L EA ++ MP K +
Sbjct: 389 HACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLHTMPFKVS 448
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+ TLL CK H + I+ + P++ YVLL+N++A+A RW V++ R
Sbjct: 449 FVALVTLLGGCKVHGDVRRGKAFTKRIVALEPENPGSYVLLNNMYAAAGRWDDVAKLRRY 508
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMK-LRGYVPDTGA 359
MR++ VK++ G S +E ++++++F++GD S+PR++EI LE L S MK GYVPDT
Sbjct: 509 MRKKGVKRQTGCSSIEYRDKIYEFSVGDTSNPRNLEIRAELERLYSRMKEEEGYVPDTRD 568
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPFKYISEIKN-------------- 405
HD+ ++KE LK HSEK+A+ F GLI P + IKN
Sbjct: 569 VFHDVSDDKKEELLKFHSEKMAMGF-----GLITSPPGSTLRIIKNLRVCSDCHTVGKLA 623
Query: 406 -----REIIVRDASRFHHFRNGKCSCGDYW 430
R IIVRD +RFHHF G CSCGDYW
Sbjct: 624 SKITGRRIIVRDGTRFHHFEGGICSCGDYW 653
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 149/329 (45%), Gaps = 34/329 (10%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIR------------------------------ 30
GFE D+V +SL H++ K G L E E V R
Sbjct: 78 GFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGAMRDIISVTAMIGAYCGSLKDSKSLFL 137
Query: 31 LMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQ 90
M +++V++W +IA G +D ++ M +G PD TF S++ +C+ L
Sbjct: 138 TMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLED 197
Query: 91 GQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGF 150
G+ +H + G D + ++LISMY+RCG L+ + + F E ++ W++M+AAY
Sbjct: 198 GRMLHVRITARGFDRDFAMQNNLISMYTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQ 257
Query: 151 HGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLE 210
KG++A+ L++ M + F + TF S++ +C+ G +G +F + +
Sbjct: 258 FDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREG-KFIHECSTSCGFEKDVI 316
Query: 211 HYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAE--EIL 268
T +V++ +CG L +A + K + + W +++A H + A ++ +
Sbjct: 317 LGTALVNMYAKCGSLADAKKSFDGISNK-DVVSWSAMIAASAQHGHAEEALELSHLMNLQ 375
Query: 269 GVNPQDAAPYVLLSNIHASAKRWQGVSEF 297
G+ + +L + ++G+ F
Sbjct: 376 GIAQNEVTASSVLHACSHGGRLYEGIDYF 404
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 113/247 (45%), Gaps = 34/247 (13%)
Query: 35 RNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQI 94
RN +W L+ QN + ++ L+ Y M D T SV+++C++L + +G+ +
Sbjct: 11 RNAFSWSILVECYVQNAMYQEALEVYKEMVREEISIDAYTLSSVLAACTKLLDVEEGRMV 70
Query: 95 HAEVVKAGASLDVGVISSLISMYSRCGCLD------------------------------ 124
+ + G DV V +SLI ++++CGCL+
Sbjct: 71 QRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGAMRDIISVTAMIGAYCGSLK 130
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
DS FL + DVV W++MIAAY +G ++A +LF +M + TF S+L AC+
Sbjct: 131 DSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACA 190
Query: 185 HCGLKEKG-MEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
E G M + + + R +++ ++ + RCG L+ A ++ K
Sbjct: 191 SPKRLEDGRMLHVRITARGFDRDFAMQNN--LISMYTRCGSLESARRYFYSIE-KKELGA 247
Query: 244 WKTLLSA 250
W T+L+A
Sbjct: 248 WNTMLAA 254
>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
gi|223942207|gb|ACN25187.1| unknown [Zea mays]
gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 885
Score = 311 bits (797), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 162/445 (36%), Positives = 254/445 (57%), Gaps = 30/445 (6%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E D+V+ +S+ Y + G++ + + M +NVI W ++ Q+G ED L Y +
Sbjct: 454 EKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKV 513
Query: 63 MRMVGF-RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M + RPD +T+V++ C++L G QI VK G +D V +++I+MYS+CG
Sbjct: 514 MLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCG 573
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+ ++ K F D+V W++MI Y HG G++AI +F+ + ++ + + +++V++L
Sbjct: 574 RILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLS 633
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
CSH GL ++G +FD+M + + P LEH++C+VDLLGR G+L EA LI +MP+K A
Sbjct: 634 GCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTA 693
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
+W LLSACK H + ++A A+ + ++ D+ Y+L++ I+A A + ++ R+ M
Sbjct: 694 EVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLM 753
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
R++ +KK PG SW+E+ N+VH F D SHP+ + I L+EL ++ GYV
Sbjct: 754 RDKGIKKNPGYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDELMEKIARLGYVR------ 807
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP----------------FKYISEIKN 405
DS E HHSEKLA+AF T L +P K IS +
Sbjct: 808 --TDSTRSEI---HHSEKLAVAFGLMT--LPTWMPIHIMKNLRICGDCHTVIKLISTVTG 860
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
RE ++RDA RFHHF G CSCGDYW
Sbjct: 861 REFVIRDAVRFHHFNGGSCSCGDYW 885
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 146/346 (42%), Gaps = 44/346 (12%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
+D S+L +Y KSG E + V + RN +AW LI+G Q G + ++ +N M
Sbjct: 323 IDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQM 382
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
R D+ ++IS C L G+Q+H+ +K+G V V +SLISMY++C L
Sbjct: 383 RAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNL 442
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
+ F D+V W+SMI AY G +A F+ M +K N +T+ ++L A
Sbjct: 443 QSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEK----NVITWNAMLGAY 498
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHY------------------------------- 212
G +E G+ + +M+ + +P Y
Sbjct: 499 IQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIID 558
Query: 213 ----TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL 268
V+ + +CG + EA + + VK + + W +++ H A I ++IL
Sbjct: 559 TSVANAVITMYSKCGRILEARKVFDFLNVK-DIVSWNAMITGYSQHGMGKQAIEIFDDIL 617
Query: 269 --GVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGV 312
G P + +LS S +G F R N+ PG+
Sbjct: 618 KRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNI--SPGL 661
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 120/235 (51%), Gaps = 2/235 (0%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y+K+ + ++ MP R+V++W +++ +Q+G + LD M+ G R D T+
Sbjct: 234 YVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTY 293
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
S +++C+ L++L G+Q+HA+V++ +D V S+L+ +Y++ GC ++ F
Sbjct: 294 TSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHD 353
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
+ V W+ +I+ + +G E++ LF QM + + +L+ C G +
Sbjct: 354 RNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQL 413
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
L +K + + + + ++ + +C L A A+ R M K + + W ++++A
Sbjct: 414 HSLCLKSGQIQAVVVSNS-LISMYAKCDNLQSAEAIFRFMNEK-DIVSWTSMITA 466
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 113/269 (42%), Gaps = 38/269 (14%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR-PDKIT 74
Y K G L + ++ MP R+V +W TL++G Q+ L+ + M G P+ T
Sbjct: 101 YAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFT 160
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLE-- 132
+ SC L Q+ A V K + D V ++L+ M+ RCG +D + + F+
Sbjct: 161 LACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIK 220
Query: 133 -----CEYS------------------------DVVLWSSMIAAYGFHGKGEEAINLFEQ 163
C S DVV W+ M++A G+ EA+++
Sbjct: 221 EPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVD 280
Query: 164 MEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY--TCVVDLLGR 221
M+ K + T+ S L AC+ G + L + R P ++ Y + +V+L +
Sbjct: 281 MQSKGVRLDSTTYTSSLTACARLSSLRWGKQ---LHAQVIRNLPHIDPYVASALVELYAK 337
Query: 222 CGYLDEAAALIRNMPVKANAIIWKTLLSA 250
G EA + ++ + N + W L+S
Sbjct: 338 SGCFKEAKGVFNSLHDR-NNVAWTVLISG 365
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 85/160 (53%), Gaps = 4/160 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +D +++ MY K G ++E KV + ++++++W +I G +Q+G+ + ++ +
Sbjct: 554 GLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIF 613
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV--ISSLISMYS 118
+ + G +PD I++V+V+S CS + +G + + +++K ++ G+ S ++ +
Sbjct: 614 DDILKRGAKPDYISYVAVLSGCSHSGLVQEG-KFYFDMMKRAHNISPGLEHFSCMVDLLG 672
Query: 119 RCGCLDDSVKTFLECEYSDVV-LWSSMIAAYGFHGKGEEA 157
R G L ++ + +W ++++A HG E A
Sbjct: 673 RAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELA 712
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 74/191 (38%), Gaps = 34/191 (17%)
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFL-EC 133
F + SC L + +H +V G + V + ++L+ Y CG L D+ + L +
Sbjct: 27 FADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDI 86
Query: 134 EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEA---------------------- 171
+ +V+ + M+ Y G+ +A+ LF +M ++ +
Sbjct: 87 AHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFL 146
Query: 172 ----------NDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGR 221
N T + +C G ++ MV+K+ + E +VD+ R
Sbjct: 147 SMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLL-AMVQKFDSQDDSEVAAALVDMFVR 205
Query: 222 CGYLDEAAALI 232
CG +D A+ L
Sbjct: 206 CGAVDLASRLF 216
>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 311 bits (797), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 168/453 (37%), Positives = 258/453 (56%), Gaps = 31/453 (6%)
Query: 4 LDLVAGSSLAHMYMKSGSL---VEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
LD V+ +S+ Y+K G + +E K+ M +++++W LI+G QNG+ E+ L +
Sbjct: 193 LDSVSWNSILAGYVKKGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMF 252
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS-- 118
M G R D++ VSV+S+C+ L+ + G+ IH V++ G V + ++LI MYS
Sbjct: 253 IEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSDM 312
Query: 119 --RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
+CGC++++++ F E V W+++I +G E ++++F +M+ N++TF
Sbjct: 313 YMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITF 372
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
+ +L AC H GL ++G F M++K+ +P ++HY C+VDLLGR G L+EA LI +MP
Sbjct: 373 MGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMP 432
Query: 237 VKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSE 296
+ + W LL ACK H T+M R+ +++ + P +VLLSNI AS W+ V E
Sbjct: 433 MAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLE 492
Query: 297 FREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPD 356
R M+++ V K PG S +E VH+F GDK+HP +++ L E+ +K+ GY PD
Sbjct: 493 VRGMMKQQGVVKTPGCSLIEANGVVHEFLAGDKTHPWINKVEGMLNEMAKRLKMEGYAPD 552
Query: 357 TGADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPFKYISEIKN----------- 405
T D+D EEKE L HSEKLAIAF GL+ + P I +KN
Sbjct: 553 TNEVSLDIDEEEKETTLFRHSEKLAIAF-----GLLTISPPTPIRIMKNLRICNDCHTAA 607
Query: 406 --------REIIVRDASRFHHFRNGKCSCGDYW 430
REI+VRD RFH+F+ G CSC DYW
Sbjct: 608 KLISKAYAREIVVRDRHRFHYFKEGACSCMDYW 640
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 96/193 (49%), Gaps = 11/193 (5%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
N W T++ Q+ AE L Y LM PD T+ V+ +C+ G++IH
Sbjct: 93 NGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIH 152
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAY---GFHG 152
V+K G DV V ++LI+MY+ CG + D+ K F E D V W+S++A Y G G
Sbjct: 153 DHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDMG 212
Query: 153 KGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY 212
+ EA LF +M++K+ V++ +L+ G+ E+ + F ++ RL+
Sbjct: 213 QVMEAWKLFNEMDEKDM----VSWSALISGYEQNGMYEEALVMF---IEMNANGMRLDE- 264
Query: 213 TCVVDLLGRCGYL 225
VV +L C +L
Sbjct: 265 VVVVSVLSACAHL 277
>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 870
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 154/444 (34%), Positives = 261/444 (58%), Gaps = 15/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E L ++L MY+K G++ E + + + +++I+W TLI G ++N LA + +
Sbjct: 428 GMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLF 487
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M ++ RP+ +T ++ + + L++L +G+++HA ++ G D V ++LI MY +C
Sbjct: 488 TEM-LLQLRPNAVTMTCILPAAASLSSLERGREMHAYALRRGYLEDDFVANALIDMYVKC 546
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L + + F +++ W+ M+A YG HG+G +AI LFEQM + +F ++L
Sbjct: 547 GALLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAIL 606
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
YACSH GL+++G FFD M K+++ +PRL+HYTC+VDLL G L EA I +MP++ +
Sbjct: 607 YACSHSGLRDEGWRFFDAMRKEHKIEPRLKHYTCMVDLLINTGNLKEAYEFIDSMPIEPD 666
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+ IW +LL C+ H++ +A +AE + + P++ YVLL+NI+A A+RW+ V + +
Sbjct: 667 SSIWVSLLRGCRIHRNVKLAEEVAERVFELEPENTGYYVLLANIYAEAERWEAVRKLKNK 726
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
+ R +++ G SW+E K +VH F +++HP+ I +L E+ M+ G+ P
Sbjct: 727 IGGRGLRENTGCSWIEAKGKVHVFIADNRNHPQGTRIAEFLNEVAKRMQEEGHDPKKKYA 786
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIKNR 406
+ D+ L HS KLA+AF + G ++ + K+IS++ +R
Sbjct: 787 LMGADNAVHGEALCGHSSKLAVAFGVLNLSEGRLIRVTKNSRVCSHCHEAAKFISKMCSR 846
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EII+RD++RFHHF G+CSC YW
Sbjct: 847 EIILRDSNRFHHFEQGRCSCRGYW 870
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 124/268 (46%), Gaps = 2/268 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF G++L Y KS + V MP R+VI+W ++I+G NGL + ++ +
Sbjct: 226 GFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMISGCTSNGLYDKAIELF 285
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M + G D T +SV+ +C+EL L G+ +H VK G + + L+ MYS C
Sbjct: 286 VRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNC 345
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
+ K F +VV W++MI +Y G ++ LF++M + + S L
Sbjct: 346 SDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSAL 405
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
+A + L + G ++ K L ++++ +CG ++E A LI + V +
Sbjct: 406 HAFAGNELLKHGKSVHGYAIRNGMEKV-LAVTNALMEMYVKCGNMEE-AKLIFDGVVSKD 463
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEIL 268
I W TL+ + + A + E+L
Sbjct: 464 MISWNTLIGGYSRNNLANEAFSLFTEML 491
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 134/291 (46%), Gaps = 14/291 (4%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMP-IRNVIAWITLIAGKAQNG-LAEDVLDQYN 61
+D V G L MY+K G L +V MP + +V W L++G A+ G L E VL +
Sbjct: 127 MDNVLGQKLVLMYLKCGDLENARRVFDEMPQVSDVRVWTALMSGYAKAGDLREGVL-LFR 185
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M G RPD T V+ + L ++ G+ +H + K G V ++L++ Y++
Sbjct: 186 KMHCCGVRPDAYTISCVLKCIAGLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSN 245
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
D++ F + DV+ W+SMI+ +G ++AI LF +M + E + T +S+L
Sbjct: 246 RTKDAILVFDGMPHRDVISWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLP 305
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYT----CVVDLLGRCGYLDEAAALIRNMPV 237
AC+ E + F +V Y K T ++D+ C + RNM V
Sbjct: 306 ACA-----ELHLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNM-V 359
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASA 288
+ N + W ++++ D + +E +G+ + + S +HA A
Sbjct: 360 QKNVVSWTAMITSYTRAGLYDKVAGLFQE-MGLEGTRPDIFAITSALHAFA 409
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 311 bits (796), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 167/451 (37%), Positives = 256/451 (56%), Gaps = 28/451 (6%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D+ ++L Y K G + + ++ + RN ++W T+I Q G E L +
Sbjct: 278 GLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLF 337
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M + ++T+ S++ +C+ LA L G Q+H K DV V ++LI MY++C
Sbjct: 338 SNMLRYQVQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKC 397
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + D+ F + D V W+++I Y HG G EAI +F M++ + + +++TFV +L
Sbjct: 398 GSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVL 457
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACS+ G ++G ++F M + Y +P +EHYTC+V L+GR G LD+A I ++P + +
Sbjct: 458 SACSNTGRLDEGKQYFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPS 517
Query: 241 AIIWKTLLSACKTHKSTDMAGRI-AEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
+IW+ LL AC H ++ GRI A+ +L + P+D A +VLLSNI+A A+RW V+ R+
Sbjct: 518 VMIWRALLGACVIHNDVEL-GRISAQRVLELEPRDEASHVLLSNIYARARRWGNVAYVRK 576
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M+ + VKKEPG+SW+E + VH FT+ D SH I+ LE L + + GY P A
Sbjct: 577 HMKRKGVKKEPGLSWIENQGNVHCFTVADTSHADLKLINGMLEFLNMKTRKAGYSPQLNA 636
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP--------------------FKY 399
+ D++ +EKE L HSE+LA+AF +V +P K
Sbjct: 637 VLLDVEDDEKERLLWLHSERLALAFG------LVRMPAGCPIRIIKNLRICVDCHSVIKL 690
Query: 400 ISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
IS+I R+IIVRD +RFHHF NG CSC DYW
Sbjct: 691 ISKIVGRDIIVRDMNRFHHFENGSCSCADYW 721
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 134/253 (52%), Gaps = 2/253 (0%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
+E DL G L +Y + G + + MP +VI W +I+ AQ+G +E L+ +
Sbjct: 178 YERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFC 237
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
MR P++ TF SV+ + +++ +L + IH +KAG S DV V ++L++ Y++CG
Sbjct: 238 QMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCG 297
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
C++ S++ F + V W+++I +Y G GE A++LF M + + +A +VT+ S+L
Sbjct: 298 CIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILR 357
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
AC+ E G++ L K + + ++D+ +CG + +A + + ++ +
Sbjct: 358 ACATLAALELGLQVHCLTAKTIYGQD-VAVGNALIDMYAKCGSIKDARFMFDMLDLR-DK 415
Query: 242 IIWKTLLSACKTH 254
+ W ++ H
Sbjct: 416 VSWNAIICGYSMH 428
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 150/328 (45%), Gaps = 50/328 (15%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ + G++L Y SG + +V + +++++W +IA A+N + L+ +
Sbjct: 76 GYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIASYAENDCFSEALEFF 135
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ MR+ GF+P+ TF V+ +C L G+ +H V+K D+ V L+ +Y+RC
Sbjct: 136 SQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTRC 195
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G DD+ + F + +DV+ WS MI+ + G+ E+A+ +F QM + N TF S+L
Sbjct: 196 GDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVL 255
Query: 181 YAC-----------------------------------SHCGLKEKGMEFFDLMVKKYRR 205
A + CG E+ ME F+ +
Sbjct: 256 QASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEAL----SD 311
Query: 206 KPRLEHYTCVVDLLGRCGYLDEAAALIRNM---PVKANAIIWKTLLSACKTHKSTDMAGR 262
+ + T +V + + G + A +L NM V+A + + ++L AC T + ++ +
Sbjct: 312 RNDVSWNTIIVSYV-QLGDGERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQ 370
Query: 263 I----AEEILGVNPQDAAPYVLLSNIHA 286
+ A+ I G QD A L +++A
Sbjct: 371 VHCLTAKTIYG---QDVAVGNALIDMYA 395
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 105/224 (46%), Gaps = 14/224 (6%)
Query: 32 MPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQG 91
MP RN ++++TLI G AQ+ + + + + G + F +V+ + G
Sbjct: 6 MPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEWAELG 65
Query: 92 QQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFH 151
+ +H V+K G + + ++LI YS GC+ + + F E D+V W+ MIA+Y +
Sbjct: 66 RIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIASYAEN 125
Query: 152 GKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFD------LMVKKYRR 205
EA+ F QM F+ N+ TF +L AC G++ FD V K
Sbjct: 126 DCFSEALEFFSQMRVAGFKPNNFTFAGVLKAC-------LGLQNFDAGKTVHCSVLKTNY 178
Query: 206 KPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
+ L +++L RCG D+A +MP K + I W ++S
Sbjct: 179 ERDLYVGVGLLELYTRCGDNDDAWRAFGDMP-KNDVIPWSFMIS 221
>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
Length = 1175
Score = 311 bits (796), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 156/408 (38%), Positives = 247/408 (60%), Gaps = 5/408 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ D+ ++L ++Y + G + E + ++ I W L++G AQ+GL E+ L +
Sbjct: 476 GYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVF 535
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G + + TFVS +S+ + LA + QG+QIHA V+K G S + V ++LIS+Y +C
Sbjct: 536 MRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKC 595
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +D+ F E + V W+++I + HG+G EA++LF+QM+++ + NDVTF+ +L
Sbjct: 596 GSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVL 655
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL E+G+ +F M +Y +PR +HY CV+D+ GR G LD A I MP+ A+
Sbjct: 656 AACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAAD 715
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A++W+TLLSACK HK+ ++ A+ +L + P D+A YVLLSN +A ++W + R+
Sbjct: 716 AMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKM 775
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
MR+R V+KEPG SW+E+KN VH F +GD+ HP + +I +L + + GY +
Sbjct: 776 MRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQEKYHL 835
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPFKYISEIKNREI 408
HD + E ++ HSEKLA+ F GL+ + P + IKN +
Sbjct: 836 FHDKEQEGRDPTDLVHSEKLAVTF-----GLMSLPPCMPLRVIKNLRV 878
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 163/314 (51%), Gaps = 8/314 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE D+ L MY K G L + +V+ ++ ++V++W ++IAG Q+ +D L +
Sbjct: 375 GFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAF 434
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G PD I S IS C+ + + QG QIHA + +G S DV + ++L+++Y+RC
Sbjct: 435 KEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARC 494
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + ++ +F E E+ D + W+ +++ + G EEA+ +F +M+Q + N TFVS L
Sbjct: 495 GRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSAL 554
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
A ++ ++G + ++K E ++ L G+CG ++A M + N
Sbjct: 555 SASANLAEIKQGKQIHARVIKT-GHSFETEVGNALISLYGKCGSFEDAKMEFSEMSER-N 612
Query: 241 AIIWKTLLSACKTH----KSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSE 296
+ W T++++C H ++ D+ ++ +E G+ P D +L+ +G+S
Sbjct: 613 EVSWNTIITSCSQHGRGLEALDLFDQMKKE--GIKPNDVTFIGVLAACSHVGLVEEGLSY 670
Query: 297 FREAMRERNVKKEP 310
F+ E ++ P
Sbjct: 671 FKSMSDEYGIRPRP 684
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 130/244 (53%), Gaps = 2/244 (0%)
Query: 7 VAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV 66
+ G+ L +Y K+G ++ +V + R+ ++W+ +++G AQNGL E+ L Y M
Sbjct: 78 IVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRA 137
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
G P SV+SSC++ QG+ IHA+ K G ++ V +++I++Y RCG +
Sbjct: 138 GVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLA 197
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHC 186
+ F + + D V ++++I+ + G GE A+ +FE+M+ + VT SLL AC+
Sbjct: 198 ERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASL 257
Query: 187 GLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKT 246
G +KG + + K + + ++DL +CG + E A +I N + N ++W
Sbjct: 258 GDLQKGTQLHSYLFKAGISSDYIMEGS-LLDLYVKCGDV-ETALVIFNSSDRTNVVLWNL 315
Query: 247 LLSA 250
+L A
Sbjct: 316 MLVA 319
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 136/255 (53%), Gaps = 2/255 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF ++ G+++ +Y++ GS E+V MP R+ + + TLI+G AQ G E L+ +
Sbjct: 173 GFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIF 232
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G PD +T S++++C+ L L +G Q+H+ + KAG S D + SL+ +Y +C
Sbjct: 233 EEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKC 292
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ ++ F + ++VVLW+ M+ A+G ++ LF QM+ N T+ +L
Sbjct: 293 GDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCIL 352
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
C+ + G + L VK + + ++D+ + G+L++A ++ + K +
Sbjct: 353 RTCTCTREIDLGEQIHSLSVKT-GFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEK-D 410
Query: 241 AIIWKTLLSACKTHK 255
+ W ++++ H+
Sbjct: 411 VVSWTSMIAGYVQHE 425
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 121/252 (48%), Gaps = 6/252 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAW-ITLIAGKAQNGLAEDVLDQ 59
G D + SL +Y+K G + + NV+ W + L+A N LA+ +
Sbjct: 274 GISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKS-FEL 332
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ M+ G RP++ T+ ++ +C+ + G+QIH+ VK G D+ V LI MYS+
Sbjct: 333 FCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSK 392
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G L+ + + + DVV W+SMIA Y H ++A+ F++M++ +++ S
Sbjct: 393 YGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASA 452
Query: 180 LYACSHCGLKEKGMEFF-DLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+ C+ +G++ + V Y + + +V+L RCG + EA + + K
Sbjct: 453 ISGCAGINAMRQGLQIHARIYVSGYSGDVSI--WNALVNLYARCGRIREAFSSFEEIEHK 510
Query: 239 ANAIIWKTLLSA 250
+ I W L+S
Sbjct: 511 -DEITWNGLVSG 521
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 14/202 (6%)
Query: 81 SCSELATLGQGQ------QIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
+C+ A G G+ +IHA+ V G V + LI +YS+ G + + + F E
Sbjct: 45 ACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELS 104
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGME 194
D V W +M++ Y +G GEEA+ L+ QM + S+L +C+ L +G
Sbjct: 105 ARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRL 164
Query: 195 FFDLMVKKYRRKPRLEHY--TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACK 252
+ + Y+ E + V+ L RCG A + +MP + + + + TL+S
Sbjct: 165 ---IHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHR-DTVTFNTLISGHA 220
Query: 253 THKSTDMAGRIAEEIL--GVNP 272
+ A I EE+ G++P
Sbjct: 221 QCGHGEHALEIFEEMQFSGLSP 242
>gi|413932592|gb|AFW67143.1| hypothetical protein ZEAMMB73_912965 [Zea mays]
Length = 619
Score = 311 bits (796), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 163/446 (36%), Positives = 253/446 (56%), Gaps = 16/446 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGS--LVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLD 58
GF D ++L HMY G L + V M + + W +I G ++GL+ D +
Sbjct: 174 GFTTDQYVSNTLIHMYSCFGGEFLGDARNVFDRMAKSSAVTWSAMIGGYVRSGLSSDAVG 233
Query: 59 QYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
+ M+ G RPD++T + V+++ ++L L + + V K G V + ++LI +
Sbjct: 234 LFREMQASGVRPDEVTMIGVLAAAADLGALELARWVGRFVEKEGIGKSVTLCNALIDALA 293
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+CG LD ++ F + +V W+S+I A G+G+EA+ +FE+M+ +DV F+
Sbjct: 294 KCGDLDGAMAVFQGMKERTIVSWTSVIDALAMEGRGKEAVAVFEEMKTAGVRPDDVAFIG 353
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+L ACSH G+ ++G +F+ M Y P++EHY C+VD+ GR G ++ A + MP+K
Sbjct: 354 VLTACSHAGMVDEGYGYFESMRMAYGIDPKIEHYGCMVDMFGRAGMVERAMEFVHKMPMK 413
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
N IIW+TL++AC+ H ++ I +L P A YV+LSN++A +RW+ SE R
Sbjct: 414 PNPIIWRTLVAACRAHGRLELGETITRNLLNEYPAHEANYVMLSNVYALTRRWKEKSEIR 473
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
M +R +KK PG S +E+ +VH+F GD+SHP+ EI + +EE+ E++ G++ T
Sbjct: 474 REMSKRGIKKVPGCSLVELDGEVHEFIAGDESHPQWKEIYMMVEEMARELRRAGHISATS 533
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYISEIK 404
+ D+D E+KE L+ HSEKLAIAF G V + K IS +
Sbjct: 534 EVLLDLDEEDKEVALQWHSEKLAIAFVLLRTPPGTQVRVVKNLRVCSDCHAAIKCISLVY 593
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
NREIIVRD SRFH F+NG CSC D+W
Sbjct: 594 NREIIVRDRSRFHRFKNGSCSCNDFW 619
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 126/282 (44%), Gaps = 16/282 (5%)
Query: 31 LMPIRNVIAWI--TLIAGKAQNGLAEDVLDQ---YNLMRMVGFRPDKITFVSVISSCSEL 85
L+P + A++ TLI A + L L + LM P+K TF ++ +C+
Sbjct: 100 LVPSVPIDAFLANTLIRAHAASPLPSARLRAASFFPLMLRSATLPNKFTFPFLLKACA-- 157
Query: 86 ATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG--CLDDSVKTFLECEYSDVVLWSS 143
A G G Q HA +K G + D V ++LI MYS G L D+ F S V WS+
Sbjct: 158 AFPGVGVQAHAAALKFGFTTDQYVSNTLIHMYSCFGGEFLGDARNVFDRMAKSSAVTWSA 217
Query: 144 MIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKY 203
MI Y G +A+ LF +M+ ++VT + +L A + + + V+K
Sbjct: 218 MIGGYVRSGLSSDAVGLFREMQASGVRPDEVTMIGVLAA-AADLGALELARWVGRFVEKE 276
Query: 204 RRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII-WKTLLSACKTHKSTDMAGR 262
+ ++D L +CG LD A A+ + M K I+ W +++ A A
Sbjct: 277 GIGKSVTLCNALIDALAKCGDLDGAMAVFQGM--KERTIVSWTSVIDALAMEGRGKEAVA 334
Query: 263 IAEEI--LGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMR 302
+ EE+ GV P D A +L+ + +G F E+MR
Sbjct: 335 VFEEMKTAGVRPDDVAFIGVLTACSHAGMVDEGYGYF-ESMR 375
>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 865
Score = 311 bits (796), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 162/445 (36%), Positives = 254/445 (57%), Gaps = 30/445 (6%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E D+V+ +S+ Y + G++ + + M +NVI W ++ Q+G ED L Y +
Sbjct: 434 EKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKV 493
Query: 63 MRMVGF-RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M + RPD +T+V++ C++L G QI VK G +D V +++I+MYS+CG
Sbjct: 494 MLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCG 553
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+ ++ K F D+V W++MI Y HG G++AI +F+ + ++ + + +++V++L
Sbjct: 554 RILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLS 613
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
CSH GL ++G +FD+M + + P LEH++C+VDLLGR G+L EA LI +MP+K A
Sbjct: 614 GCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTA 673
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
+W LLSACK H + ++A A+ + ++ D+ Y+L++ I+A A + ++ R+ M
Sbjct: 674 EVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLM 733
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
R++ +KK PG SW+E+ N+VH F D SHP+ + I L+EL ++ GYV
Sbjct: 734 RDKGIKKNPGYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDELMEKIARLGYVR------ 787
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP----------------FKYISEIKN 405
DS E HHSEKLA+AF T L +P K IS +
Sbjct: 788 --TDSTRSEI---HHSEKLAVAFGLMT--LPTWMPIHIMKNLRICGDCHTVIKLISTVTG 840
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
RE ++RDA RFHHF G CSCGDYW
Sbjct: 841 REFVIRDAVRFHHFNGGSCSCGDYW 865
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 146/346 (42%), Gaps = 44/346 (12%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
+D S+L +Y KSG E + V + RN +AW LI+G Q G + ++ +N M
Sbjct: 303 IDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQM 362
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCL 123
R D+ ++IS C L G+Q+H+ +K+G V V +SLISMY++C L
Sbjct: 363 RAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNL 422
Query: 124 DDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
+ F D+V W+SMI AY G +A F+ M +K N +T+ ++L A
Sbjct: 423 QSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEK----NVITWNAMLGAY 478
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHY------------------------------- 212
G +E G+ + +M+ + +P Y
Sbjct: 479 IQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIID 538
Query: 213 ----TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL 268
V+ + +CG + EA + + VK + + W +++ H A I ++IL
Sbjct: 539 TSVANAVITMYSKCGRILEARKVFDFLNVK-DIVSWNAMITGYSQHGMGKQAIEIFDDIL 597
Query: 269 --GVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGV 312
G P + +LS S +G F R N+ PG+
Sbjct: 598 KRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNI--SPGL 641
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 120/235 (51%), Gaps = 2/235 (0%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y+K+ + ++ MP R+V++W +++ +Q+G + LD M+ G R D T+
Sbjct: 214 YVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTY 273
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
S +++C+ L++L G+Q+HA+V++ +D V S+L+ +Y++ GC ++ F
Sbjct: 274 TSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHD 333
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
+ V W+ +I+ + +G E++ LF QM + + +L+ C G +
Sbjct: 334 RNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQL 393
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
L +K + + + + ++ + +C L A A+ R M K + + W ++++A
Sbjct: 394 HSLCLKSGQIQAVVVSNS-LISMYAKCDNLQSAEAIFRFMNEK-DIVSWTSMITA 446
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 113/269 (42%), Gaps = 38/269 (14%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR-PDKIT 74
Y K G L + ++ MP R+V +W TL++G Q+ L+ + M G P+ T
Sbjct: 81 YAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFT 140
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLE-- 132
+ SC L Q+ A V K + D V ++L+ M+ RCG +D + + F+
Sbjct: 141 LACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIK 200
Query: 133 -----CEYS------------------------DVVLWSSMIAAYGFHGKGEEAINLFEQ 163
C S DVV W+ M++A G+ EA+++
Sbjct: 201 EPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVD 260
Query: 164 MEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY--TCVVDLLGR 221
M+ K + T+ S L AC+ G + L + R P ++ Y + +V+L +
Sbjct: 261 MQSKGVRLDSTTYTSSLTACARLSSLRWGKQ---LHAQVIRNLPHIDPYVASALVELYAK 317
Query: 222 CGYLDEAAALIRNMPVKANAIIWKTLLSA 250
G EA + ++ + N + W L+S
Sbjct: 318 SGCFKEAKGVFNSLHDR-NNVAWTVLISG 345
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 85/160 (53%), Gaps = 4/160 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +D +++ MY K G ++E KV + ++++++W +I G +Q+G+ + ++ +
Sbjct: 534 GLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIF 593
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV--ISSLISMYS 118
+ + G +PD I++V+V+S CS + +G + + +++K ++ G+ S ++ +
Sbjct: 594 DDILKRGAKPDYISYVAVLSGCSHSGLVQEG-KFYFDMMKRAHNISPGLEHFSCMVDLLG 652
Query: 119 RCGCLDDSVKTFLECEYSDVV-LWSSMIAAYGFHGKGEEA 157
R G L ++ + +W ++++A HG E A
Sbjct: 653 RAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELA 692
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 74/191 (38%), Gaps = 34/191 (17%)
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFL-EC 133
F + SC L + +H +V G + V + ++L+ Y CG L D+ + L +
Sbjct: 7 FADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDI 66
Query: 134 EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEA---------------------- 171
+ +V+ + M+ Y G+ +A+ LF +M ++ +
Sbjct: 67 AHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFL 126
Query: 172 ----------NDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGR 221
N T + +C G ++ MV+K+ + E +VD+ R
Sbjct: 127 SMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLL-AMVQKFDSQDDSEVAAALVDMFVR 185
Query: 222 CGYLDEAAALI 232
CG +D A+ L
Sbjct: 186 CGAVDLASRLF 196
>gi|449477795|ref|XP_004155125.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g56550-like [Cucumis sativus]
Length = 579
Score = 311 bits (796), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 173/447 (38%), Positives = 253/447 (56%), Gaps = 19/447 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G++ D++ ++L Y G + +V MP R+++AW +I+ +Q GL ++ L Y
Sbjct: 135 GYDADVIVCTNLVKCYSAMGLVCIARQVFDKMPARDLVAWNAMISCFSQQGLHQEALQTY 194
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
N MR D T V +ISSC+ L L G Q+H + G + V ++LI MY++C
Sbjct: 195 NQMRSENVDVDGFTLVGLISSCAHLGALNIGVQMHRFARENGLDQSLYVGNALIDMYAKC 254
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G LD ++ F + D+ W+SMI YG HG+G EAI F+QM + + N VTF+ LL
Sbjct: 255 GSLDQAILIFDRMQRKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEARIQPNPVTFLGLL 314
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
CSH GL ++G+++F+LM K+R KP ++HY C+VDL GR G LD+A ++ N +
Sbjct: 315 CGCSHQGLVQEGVKYFNLMSSKFRLKPEVKHYGCLVDLYGRAGKLDKALEIVSNSS-HND 373
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILG-VNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
+++W+ LL +CK HK+ + G IA L + A +LL+ I+A K GV+ R+
Sbjct: 374 SVLWRILLGSCKIHKNVTI-GEIAMNRLSELGATSAGDCILLATIYAGEKDKAGVARMRK 432
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
++ + K PG SW+EI QVH+F + DKSH S+E+ L E+ + GYV D
Sbjct: 433 MIKSQGKKTTPGWSWIEIGEQVHKFVVDDKSHRYSVEVYEKLREVIHQASFFGYVGDESI 492
Query: 360 DMHDMDS--EEKEYNLKHHSEKLAIAF-----AEHTRGLIVM---------LPFKYISEI 403
DM S E + + +HSEKLAIAF A+ T+ IV K +S
Sbjct: 493 SSLDMLSTMETLKTSCTYHSEKLAIAFGLARTADGTQIRIVKNLRVCRDCHSFIKAVSVA 552
Query: 404 KNREIIVRDASRFHHFRNGKCSCGDYW 430
NREIIVRD RFHHF+ G+CSC DYW
Sbjct: 553 FNREIIVRDRVRFHHFKGGECSCNDYW 579
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 120/254 (47%), Gaps = 17/254 (6%)
Query: 19 SGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR-PDKITFVS 77
SGSL + + M AW ++I G AQ+ D + YN M F PD TF
Sbjct: 51 SGSLAYAQLLFHQMECPQTEAWNSIIRGFAQSSSPIDAIVFYNQMVCDSFSIPDTFTFSF 110
Query: 78 VISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSD 137
V+ +C + + +++H V++ G DV V ++L+ YS G + + + F + D
Sbjct: 111 VLKACERIKAERKCKEVHGSVIRCGYDADVIVCTNLVKCYSAMGLVCIARQVFDKMPARD 170
Query: 138 VVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFD 197
+V W++MI+ + G +EA+ + QM + + + T V L+ +C+H G G++
Sbjct: 171 LVAWNAMISCFSQQGLHQEALQTYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQ--- 227
Query: 198 LMVKKYRRKPRLEHY----TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKT 253
+ ++ R+ L+ ++D+ +CG LD+A + M K + W +++
Sbjct: 228 --MHRFARENGLDQSLYVGNALIDMYAKCGSLDQAILIFDRMQRK-DIFTWNSMIVGYGV 284
Query: 254 HKSTDMAGRIAEEI 267
H GR +E I
Sbjct: 285 H------GRGSEAI 292
>gi|357111415|ref|XP_003557509.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Brachypodium distachyon]
Length = 615
Score = 311 bits (796), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 164/440 (37%), Positives = 251/440 (57%), Gaps = 26/440 (5%)
Query: 11 SLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRP 70
+L +MY + G + + V+++ +I ++ + L + M+ G +
Sbjct: 182 TLINMYAECGDARAARTMFGRVDGECVVSYNAMITAAVRSSRPGEALVLFREMQAKGLKL 241
Query: 71 DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTF 130
+T +SV+S+C+ L L G+ IH V K V V ++LI MY +CG L+D++ F
Sbjct: 242 TSVTLISVLSACALLGALELGRWIHEYVRKVQLDSLVKVNTALIDMYGKCGSLEDAISVF 301
Query: 131 LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKE 190
E D WS MI AY H G EAI+LFE+M+++ + +DVTF+ +LYACSH GL
Sbjct: 302 QGMESRDRQAWSVMIVAYANHSYGREAISLFEEMKKQGIKPDDVTFLGVLYACSHSGLVS 361
Query: 191 KGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+G+++FD M +++ P ++HY CV DLL R G LD A I +P+K AI+W+TLLSA
Sbjct: 362 EGLQYFDSM-REFGLVPGIKHYGCVADLLARSGQLDRAYEFIDELPIKPTAILWRTLLSA 420
Query: 251 CKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEP 310
C + D+ ++ E IL ++ YV+ SN+ A+ RW+ ++ R+ M E+ V K P
Sbjct: 421 CGSRGDADLGKQVFERILELDDSHGGDYVIFSNLCANTGRWEEMNRVRKLMNEKGVVKVP 480
Query: 311 GVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMH-DMDSEEK 369
G S +E+ N+VH+F GD HP+S++ ++ + ++KL GYVP+T H +M EEK
Sbjct: 481 GCSSIEVDNRVHEFFAGDGRHPKSLDARRMVDGVIEQLKLAGYVPNTSHVFHVEMGEEEK 540
Query: 370 EYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREIIV 410
+L++HSEKLAI+F GL+ P K +S + NR II+
Sbjct: 541 AVSLRYHSEKLAISF-----GLLNTSPGTTLRVVKNLRVCPDCHSMAKLVSMVFNRRIIL 595
Query: 411 RDASRFHHFRNGKCSCGDYW 430
RD +RFHHF +G CSCGDYW
Sbjct: 596 RDLNRFHHFEDGVCSCGDYW 615
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 139/300 (46%), Gaps = 21/300 (7%)
Query: 18 KSGSLVEGEKVIRLMPIRNVIAWI-TLIAGKAQ-------NGLAEDVLDQYNLMRMVGFR 69
K L +V +P + W TL+ G A+ AE+ + M G
Sbjct: 80 KPAQLSYARQVFDRIPGPGDVVWYNTLLRGYARCSAAGGARPPAEEAARVFVRMLEEGVA 139
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
PD TFVS++ +C+ +G+Q H VK GA+ V+ +LI+MY+ CG +
Sbjct: 140 PDTYTFVSLLKACAAARAGEEGRQAHGVAVKVGAAEHEYVLPTLINMYAECGDARAARTM 199
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F + VV +++MI A + EA+ LF +M+ K + VT +S+L AC+ G
Sbjct: 200 FGRVDGECVVSYNAMITAAVRSSRPGEALVLFREMQAKGLKLTSVTLISVLSACALLGAL 259
Query: 190 EKGMEFFDLMVKKYRRKPRLEHY----TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
E G + +Y RK +L+ T ++D+ G+CG L++A ++ + M + + W
Sbjct: 260 ELGR-----WIHEYVRKVQLDSLVKVNTALIDMYGKCGSLEDAISVFQGMESR-DRQAWS 313
Query: 246 TLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
++ A H A + EE+ G+ P D +L S +G+ F ++MRE
Sbjct: 314 VMIVAYANHSYGREAISLFEEMKKQGIKPDDVTFLGVLYACSHSGLVSEGLQYF-DSMRE 372
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 88/195 (45%), Gaps = 4/195 (2%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L MY K GSL + V + M R+ AW +I A + + + + M+ G +
Sbjct: 282 TALIDMYGKCGSLEDAISVFQGMESRDRQAWSVMIVAYANHSYGREAISLFEEMKKQGIK 341
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
PD +TF+ V+ +CS + +G Q + + G + + + +R G LD + +
Sbjct: 342 PDDVTFLGVLYACSHSGLVSEGLQYFDSMREFGLVPGIKHYGCVADLLARSGQLDRAYEF 401
Query: 130 FLECEYSDV-VLWSSMIAAYGFHGKGEEAINLFEQ-MEQKEFEANDVTFVSLLYACSHCG 187
E +LW ++++A G G + +FE+ +E + D S L C++ G
Sbjct: 402 IDELPIKPTAILWRTLLSACGSRGDADLGKQVFERILELDDSHGGDYVIFSNL--CANTG 459
Query: 188 LKEKGMEFFDLMVKK 202
E+ LM +K
Sbjct: 460 RWEEMNRVRKLMNEK 474
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 61/145 (42%), Gaps = 26/145 (17%)
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
+ + C+ L L Q +HA VK+G ++ L+++ C D +
Sbjct: 34 LLPYLPQCTTLRALAQ---LHAAAVKSGLQAHPAFVTRLLTL-----CTDQGAAKPAQLS 85
Query: 135 YS-----------DVVLWSSMIAAY-------GFHGKGEEAINLFEQMEQKEFEANDVTF 176
Y+ DVV +++++ Y G EEA +F +M ++ + TF
Sbjct: 86 YARQVFDRIPGPGDVVWYNTLLRGYARCSAAGGARPPAEEAARVFVRMLEEGVAPDTYTF 145
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVK 201
VSLL AC+ E+G + + VK
Sbjct: 146 VSLLKACAAARAGEEGRQAHGVAVK 170
>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
Length = 649
Score = 311 bits (796), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 160/439 (36%), Positives = 249/439 (56%), Gaps = 14/439 (3%)
Query: 6 LVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRM 65
+V+ +SL + G + E + MP R+ ++W +I G Q + L+ + M+
Sbjct: 211 VVSWTSLLSGLTRLGRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQC 270
Query: 66 VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDD 125
D+ T VSVI++C++L L G+ + + + G +D V ++LI MYS+CG ++
Sbjct: 271 SNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIER 330
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
++ F + + D W+++I +G GEEAI +F +M ++VTF+ +L AC+H
Sbjct: 331 ALDVFKDMHHRDKFTWTAIILGLAVNGYGEEAIEMFHRMIGVSETPDEVTFIGVLTACTH 390
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
GL +KG EFF M + Y P + HY C++DL GR G + EA I MP+ N+ IW
Sbjct: 391 AGLVDKGREFFLSMRETYNIAPNVVHYGCIIDLFGRAGKITEALDAIDQMPMTPNSTIWG 450
Query: 246 TLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERN 305
TLL+AC+ H ++++ + E +L ++P+++ Y LLSNI+A RW+ V R + E+
Sbjct: 451 TLLAACRVHGNSEIGELVTERLLQMDPENSTVYTLLSNIYAKCNRWEDVRRLRHTIMEKG 510
Query: 306 VKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMD 365
+KKEPG S +E+ +H+F GD+SHP S EI LE + +++ GY PD ++
Sbjct: 511 IKKEPGCSLIEMNGIIHEFVAGDQSHPMSKEIYCKLESIINDLNNVGYFPDVTEVFVEVA 570
Query: 366 SEEKEYNLKHHSEKLAIAFA----------EHTRGLIVML----PFKYISEIKNREIIVR 411
EEK+ L HSEKLAIAFA + L + L K IS + RE++VR
Sbjct: 571 EEEKQKVLFWHSEKLAIAFALLSSEPNTVIRIVKNLRMCLDCHNAIKLISRLYGREVVVR 630
Query: 412 DASRFHHFRNGKCSCGDYW 430
D +RFHHFR+G CSC DYW
Sbjct: 631 DRTRFHHFRHGFCSCKDYW 649
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 95/185 (51%), Gaps = 3/185 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G ++D G++L MY K GS+ V + M R+ W +I G A NG E+ ++ +
Sbjct: 307 GIKMDAFVGNALIDMYSKCGSIERALDVFKDMHHRDKFTWTAIILGLAVNGYGEEAIEMF 366
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSR 119
+ M V PD++TF+ V+++C+ + +G++ + + + +V +I ++ R
Sbjct: 367 HRMIGVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMRETYNIAPNVVHYGCIIDLFGR 426
Query: 120 CGCLDDSVKTFLECEYS-DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDV-TFV 177
G + +++ + + + +W +++AA HG E + E++ Q + E + V T +
Sbjct: 427 AGKITEALDAIDQMPMTPNSTIWGTLLAACRVHGNSEIGELVTERLLQMDPENSTVYTLL 486
Query: 178 SLLYA 182
S +YA
Sbjct: 487 SNIYA 491
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 100/230 (43%), Gaps = 33/230 (14%)
Query: 38 IAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSE-LATLGQGQQIHA 96
+ W LI+G + + + M G P +T+VSV+S+C + + G Q+H
Sbjct: 110 VVWNALISGHNRCRRFGEACCSFVDMARAGAAPTPVTYVSVLSACGKGTGDVLLGMQVHG 169
Query: 97 EVVKAGASLDVGVISSLISMYSRC-------------------------------GCLDD 125
VV +G D+ V ++L+ MY+ C G +D+
Sbjct: 170 RVVGSGVLPDLRVENALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLSGLTRLGRVDE 229
Query: 126 SVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
+ F D V W++MI Y + EA+ +F +M+ A++ T VS++ AC+
Sbjct: 230 ARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQ 289
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNM 235
G E G E+ + + + K ++D+ +CG ++ A + ++M
Sbjct: 290 LGALEMG-EWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDM 338
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 113/261 (43%), Gaps = 14/261 (5%)
Query: 54 EDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSL 113
ED + Y M G PD TF ++ + + ++ + +HA VVK G + V +SL
Sbjct: 25 EDAVAGYARMLARGAMPDAYTFPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHVATSL 84
Query: 114 ISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEAND 173
++ Y+ G + E E V+W+++I+ + + EA F M +
Sbjct: 85 VTAYAAGGDGAAARALLSERERDTPVVWNALISGHNRCRRFGEACCSFVDMARAGAAPTP 144
Query: 174 VTFVSLLYACSH-CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALI 232
VT+VS+L AC G GM+ +V P L +VD+ C ++ A L
Sbjct: 145 VTYVSVLSACGKGTGDVLLGMQVHGRVVGS-GVLPDLRVENALVDMYAECADMESAWKLF 203
Query: 233 RNMPVKANAIIWKTLLSAC----KTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASA 288
M V++ + W +LLS + ++ D+ GR+ E +D + + + + A
Sbjct: 204 DGMQVRS-VVSWTSLLSGLTRLGRVDEARDLFGRMPE-------RDTVSWTAMIDGYVQA 255
Query: 289 KRWQGVSEFREAMRERNVKKE 309
R++ E M+ NV +
Sbjct: 256 ARFREALEMFREMQCSNVSAD 276
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 311 bits (796), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 163/451 (36%), Positives = 255/451 (56%), Gaps = 26/451 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF +L ++L MY K G ++ + ++VI+W T+I G + L E+ L +
Sbjct: 293 GFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALF 352
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSR 119
+M +P+ +TF+ ++ +C+ L L G+ +HA + K S + + +SLI MY++
Sbjct: 353 EVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAK 412
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE-FEANDVTFVS 178
CGC++ + + F ++ W++M++ + HG E A+ LF +M K F +D+TFV
Sbjct: 413 CGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVG 472
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+L AC+ GL + G ++F M++ Y P+L+HY C++DLL R +EA L++NM ++
Sbjct: 473 VLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEME 532
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
+ IW +LLSACK H + +AE + + P++A +VLLSNI+A A RW V+ R
Sbjct: 533 PDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPENAGAFVLLSNIYAGAGRWDDVARIR 592
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
+ ++ +KK PG + +EI VH+F +GDK HP I L E+ ++ G+VP+T
Sbjct: 593 TRLNDKGMKKVPGCTSIEIDGDVHEFLVGDKFHPECNNIYKMLNEVDKLLEENGFVPNTS 652
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKY 399
++DMD E KE L HSEKLAI+F GLI P K
Sbjct: 653 EVLYDMDEEWKEGALSQHSEKLAISF-----GLIKTKPGTTIRIVKNLRVCGNCHSATKL 707
Query: 400 ISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
IS+I NREII RD +RFHHF++G CSC D W
Sbjct: 708 ISKIFNREIIARDRNRFHHFKDGFCSCNDCW 738
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 150/308 (48%), Gaps = 4/308 (1%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D V+ ++L Y+ G L + ++ +P+++V++W +I+G Q+G E+ + + M+
Sbjct: 196 DAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQ 255
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
P+K T V V+S+C + G+ I + V G ++ + ++LI MY +CG D
Sbjct: 256 EANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETD 315
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ + F E DV+ W++MI Y + EEA+ LFE M + + NDVTF+ +L+AC+
Sbjct: 316 IARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACA 375
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
G + G + K R +T ++D+ +CG ++ A + R+M + N W
Sbjct: 376 CLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSR-NLASW 434
Query: 245 KTLLSACKTHKSTDMAGRIAEEILG---VNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
+LS H + A + E++ P D +LS + G FR +
Sbjct: 435 NAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMI 494
Query: 302 RERNVKKE 309
++ + +
Sbjct: 495 QDYGISPK 502
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 120/286 (41%), Gaps = 38/286 (13%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
NV W +LI G + + L ++ M G +P+ TF + SC++ +G+Q+H
Sbjct: 95 NVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLH 154
Query: 96 AEVVKAGASLDVGVISSLISMYSRC-------------------------------GCLD 124
A +K + V +S+I MY+ GCLD
Sbjct: 155 AHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLD 214
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
D+ + F E DVV W++MI+ Y G+ EEAI F +M++ N T V +L AC
Sbjct: 215 DARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACG 274
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H E G ++ V+ L+ ++D+ +CG D A L + K + I W
Sbjct: 275 HTRSGELG-KWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEK-DVISW 332
Query: 245 KTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASA 288
T++ + A + E +L V P D L +HA A
Sbjct: 333 NTMIGGYSYLSLYEEALALFEVMLRSNVKPNDV---TFLGILHACA 375
Score = 38.9 bits (89), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 89/199 (44%), Gaps = 12/199 (6%)
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISM--YSRCGCLDDSVKTFLE 132
+++++ C + T +QIH+ ++K G + V V S LI S G L ++ F E
Sbjct: 31 YLNLLEKCKNINTF---KQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEE 87
Query: 133 CEY---SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
+ +V +W+S+I Y +++LF +M + N TF L +C+
Sbjct: 88 NQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKAT 147
Query: 190 EKGMEFFDLMVK-KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
+G + +K P + +T V+ + G +D A L+ + +A+ + L+
Sbjct: 148 HEGKQLHAHALKLALHFNPHV--HTSVIHMYASVGEMD-FARLVFDKSSLRDAVSFTALI 204
Query: 249 SACKTHKSTDMAGRIAEEI 267
+ + D A R+ +EI
Sbjct: 205 TGYVSQGCLDDARRLFDEI 223
>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 311 bits (796), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 159/446 (35%), Positives = 249/446 (55%), Gaps = 46/446 (10%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
+L ++L MY K GS+ V M ++++I+W T++
Sbjct: 248 NLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGE------------------ 289
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+PD T ++ +C+ L+ L +G++IH +++ G S D V ++L+ +Y +CG L
Sbjct: 290 ---LKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLG 346
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ F D+V W+ MIA YG HG G EAI F +M E ++V+F+S+LYACS
Sbjct: 347 LARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACS 406
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL E+G FF +M + +P+LEHY C+VDLL R G L +A I +P+ +A IW
Sbjct: 407 HSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIW 466
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
LL C+ + ++A ++AE + + P++ YVLL+NI+A A++W+ V RE + ++
Sbjct: 467 GALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKK 526
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDK-SHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHD 363
++K PG SW+EIK +V+ F G+ SHP S +I+ L+++ +MK GY P T + +
Sbjct: 527 GLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALIN 586
Query: 364 MDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPFKYISEIKN------------------ 405
D +KE L HSEKLA+AF GL+ + P K I KN
Sbjct: 587 ADEMQKEMALCGHSEKLAMAF-----GLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKET 641
Query: 406 -REIIVRDASRFHHFRNGKCSCGDYW 430
REI++RD++RFHHF++G CSC +W
Sbjct: 642 RREIVLRDSNRFHHFKDGYCSCRGFW 667
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 119/223 (53%), Gaps = 2/223 (0%)
Query: 35 RNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQI 94
R+VI+W ++I+G NGL E L Y M +G D T +SV+ C++ TL G+ +
Sbjct: 76 RDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSGTLSLGKAV 135
Query: 95 HAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKG 154
H+ +K+ + ++L+ MYS+CG LD +++ F + +VV W+SMIA Y G
Sbjct: 136 HSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWS 195
Query: 155 EEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC 214
+ AI L +QME++ + + V S+L+AC+ G + G + D +K L
Sbjct: 196 DGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDY-IKANNMASNLFVCNA 254
Query: 215 VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKST 257
++D+ +CG ++ A ++ M VK + I W T++ K T
Sbjct: 255 LMDMYAKCGSMEGANSVFSTMVVK-DIISWNTMVGELKPDSRT 296
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 132/311 (42%), Gaps = 27/311 (8%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
FE + ++L MY K G L +V M RNV++W ++IAG ++G ++ +
Sbjct: 144 FERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQ 203
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M G + D + S++ +C+ +L G+ +H + + ++ V ++L+ MY++CG
Sbjct: 204 QMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCG 263
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
++ + F D++ W++M+ E + + T +L
Sbjct: 264 SMEGANSVFSTMVVKDIISWNTMVG---------------------ELKPDSRTMACILP 302
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
AC+ E+G E +++ R +VDL +CG L A L +P K +
Sbjct: 303 ACASLSALERGKEIHGYILRNGYSSDR-HVANALVDLYVKCGVLGLARLLFDMIPSK-DL 360
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
+ W +++ H + A E+ G+ P + + +L S QG F
Sbjct: 361 VSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYI 420
Query: 300 AMRERNVKKEP 310
+ N+ EP
Sbjct: 421 MKNDFNI--EP 429
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/189 (20%), Positives = 71/189 (37%), Gaps = 53/189 (28%)
Query: 113 LISMYSRCGCLDDSVK-------------TFLECEYS----------------------- 136
L+S Y+ CG L + + F+ EY+
Sbjct: 2 LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGK 61
Query: 137 ---------------DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
DV+ W+SMI+ Y +G E + +++QM + + T +S+L
Sbjct: 62 RSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLV 121
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
C+ G G L +K + R+ ++D+ +CG LD A + M + N
Sbjct: 122 GCAKSGTLSLGKAVHSLAIKSSFER-RINFSNTLLDMYSKCGDLDGALRVFEKMGER-NV 179
Query: 242 IIWKTLLSA 250
+ W ++++
Sbjct: 180 VSWTSMIAG 188
>gi|297720639|ref|NP_001172681.1| Os01g0884800 [Oryza sativa Japonica Group]
gi|20161229|dbj|BAB90156.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|255673935|dbj|BAH91411.1| Os01g0884800 [Oryza sativa Japonica Group]
Length = 517
Score = 310 bits (795), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 159/441 (36%), Positives = 241/441 (54%), Gaps = 25/441 (5%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L Y K L V MP R+V+ W +L+ G A+ G + Y M G
Sbjct: 82 NALVDAYAKLSRLGAARAVFDEMPRRDVVTWTSLVTGLARAGSHGLAVRAYRDMVAAGVA 141
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
D+ +V+SSC+ L G+ +HA V++G + V +SL+SMY++ G L D+
Sbjct: 142 TDEFAVAAVLSSCAGSTALELGRSVHAAAVRSGHEPFLSVGNSLVSMYAKTGSLRDARTV 201
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F + W+++I Y +G+G E++ ++ M + + VTFV LL+ACSH GL
Sbjct: 202 FDAMRSRCAITWTALIVGYAQNGRGRESLAVYADMARSGCRPDYVTFVGLLFACSHAGLL 261
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP-VKANAIIWKTLL 248
+ G F M ++ P +HY C+VDLLGR G L EA L+ P + +A +WK LL
Sbjct: 262 DAGRAHFQSMQSEHGISPGPDHYACMVDLLGRAGRLGEAVDLLDRSPAAELDATVWKALL 321
Query: 249 SACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKK 308
+AC+TH++ +A R A + ++P DA PYV+LSN+++ A+RW V+ R MR R + K
Sbjct: 322 AACRTHRNAALAERAAGMVWRLDPTDAMPYVMLSNLYSRARRWGDVARVRALMRSRGISK 381
Query: 309 EPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEE 368
EPG SW+ + H F GD+ H R+ EI EE+ + ++ RG+VPDT + D E
Sbjct: 382 EPGCSWVVVAGVTHVFHAGDRDHQRAAEIYRKAEEMAARIRARGHVPDTEWALQDEAPEG 441
Query: 369 KEYNLKHHSEKLAIAFAEHTRGLIVM-------------------LPFKYISEIKNREII 409
+E L HH E+LA+AF GL+ + K ++E+ REII
Sbjct: 442 REMGLAHHGERLAVAF-----GLLAVPAAAPIRVYKNLRVCGDCHAAIKMVAEVYGREII 496
Query: 410 VRDASRFHHFRNGKCSCGDYW 430
+RD++ FHH ++G CSCGDYW
Sbjct: 497 LRDSNCFHHMKDGSCSCGDYW 517
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 85/214 (39%), Gaps = 3/214 (1%)
Query: 35 RNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQI 94
+ ++A I+ ++ GL L + MR G R D+ T +++S + L
Sbjct: 7 KGLVACNAAISRCSRAGLHRRALALFTEMRARGLRADEYTLPPILNSAALLRAPPAAALH 66
Query: 95 HAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKG 154
+ AS + V ++L+ Y++ L + F E DVV W+S++ G
Sbjct: 67 ALLLRAGLAS-HLHVANALVDAYAKLSRLGAARAVFDEMPRRDVVTWTSLVTGLARAGSH 125
Query: 155 EEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC 214
A+ + M ++ ++L +C+ E G V+ +P L
Sbjct: 126 GLAVRAYRDMVAAGVATDEFAVAAVLSSCAGSTALELGRSVHAAAVRSG-HEPFLSVGNS 184
Query: 215 VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
+V + + G L +A + M + AI W L+
Sbjct: 185 LVSMYAKTGSLRDARTVFDAMRSRC-AITWTALI 217
>gi|20146226|dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
gi|125573391|gb|EAZ14906.1| hypothetical protein OsJ_04836 [Oryza sativa Japonica Group]
Length = 785
Score = 310 bits (795), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 164/450 (36%), Positives = 252/450 (56%), Gaps = 35/450 (7%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F+ D GS+L +Y SG + +G + R P +++ W +++G QN L E L ++
Sbjct: 350 FQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFH 409
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
G +PD T SV+++C+ LA G+QI K+G + +S + MY+R G
Sbjct: 410 ESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSG 469
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+D + + F E E DVV WS++I+ + HG +A++ F++M + N++TF+ +L
Sbjct: 470 DVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLT 529
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
ACSH GL ++G+ +++ M K Y P ++H TCVVDLLGR G L +A A I N A+
Sbjct: 530 ACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNSIFHADP 589
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
+IW++LL++C+ H+ + +A I+ + P +A YV+L N++ A S+ R+ M
Sbjct: 590 VIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVILYNMYLDAGELSLASKTRDLM 649
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
++R VKKEPG+SW+E+K VH F GDKSHP S I LEE+ S ++
Sbjct: 650 KQRGVKKEPGLSWIELKCGVHSFVAGDKSHPESSAIYTKLEEMLSRIEKLATT------- 702
Query: 362 HDMDSEEKEYNLKH-HSEKLAIAFAEHTRGLIVMLP--------------------FKYI 400
D + ++E NL + HSEKLA+A ++ LP K I
Sbjct: 703 -DTEISKREQNLMNCHSEKLAVALG------MIHLPQSAPIRVMKNLRVCRDCHSTMKLI 755
Query: 401 SEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
S+ +NREII+RD RFHHFR+G CSC DYW
Sbjct: 756 SKSENREIILRDPIRFHHFRDGSCSCADYW 785
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 138/277 (49%), Gaps = 10/277 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + +SL MY K G + E +V + R+ ++W +L++G + G E+++ +
Sbjct: 139 GLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVF 198
Query: 61 NLMRMVGFRPDKITFVSVISSCSEL--ATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
+MR G + SVI CS T+ + +H V+KAG DV ++S++I MY+
Sbjct: 199 AMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYA 258
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAY----GFHGK--GEEAINLFEQMEQKEFEAN 172
+ G L ++ F + +VV++++MIA + GK EA+ L+ +++ + +
Sbjct: 259 KKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPT 318
Query: 173 DVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALI 232
+ TF S+L AC+ G E G + ++ KY + + ++DL G +++
Sbjct: 319 EFTFSSVLRACNLAGYLEFGKQIHGQVI-KYTFQEDDFIGSALIDLYFNSGCMEDGFRCF 377
Query: 233 RNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILG 269
R+ P K + + W ++S C ++ + A + E LG
Sbjct: 378 RSSP-KHDIVTWTAMVSGCVQNELHEKALSLFHESLG 413
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 161/352 (45%), Gaps = 29/352 (8%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L Y + G + +++ MP RN +++ LI ++ GLA L+ R G
Sbjct: 47 NTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVD 106
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
D+ ++ + +++CS L G+ +HA + G S V V +SL+SMYS+CG + ++ +
Sbjct: 107 VDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRV 166
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F E D V W+S+++ Y G EE + +F M + N S++ CS G
Sbjct: 167 FDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCS--GRG 224
Query: 190 EKGMEFFDLM---VKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKT 246
+ M+ + + V K + + ++D+ + G L EAAAL R++ + N +++ T
Sbjct: 225 DGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQ-EPNVVMFNT 283
Query: 247 LLSA-CKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERN 305
+++ C+T T + +A E L L S + + + + F +R N
Sbjct: 284 MIAGFCRTE--TVIGKEVASEAL----------TLYSEVQSRGMQPTEFT-FSSVLRACN 330
Query: 306 VKKEPGVSWLEIKNQVH----QFTMGDKSHPRSMEIDLYLEELTSEMKLRGY 353
+ +LE Q+H ++T + S IDLY E R +
Sbjct: 331 L-----AGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCF 377
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 127/264 (48%), Gaps = 16/264 (6%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNG------LAE 54
G + D+ S++ MY K G+LVE + R + NV+ + T+IAG + +A
Sbjct: 242 GLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVAS 301
Query: 55 DVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLI 114
+ L Y+ ++ G +P + TF SV+ +C+ L G+QIH +V+K D + S+LI
Sbjct: 302 EALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALI 361
Query: 115 SMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDV 174
+Y GC++D + F D+V W++M++ + E+A++LF + + +
Sbjct: 362 DLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLF 421
Query: 175 TFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV----VDLLGRCGYLDEAAA 230
T S++ AC+ + G + ++ + K + +T + V + R G +D A
Sbjct: 422 TISSVMNACASLAVARAGEQ-----IQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATR 476
Query: 231 LIRNMPVKANAIIWKTLLSACKTH 254
+ M + + W ++S H
Sbjct: 477 RFQEME-SHDVVSWSAVISCHAQH 499
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 89/171 (52%), Gaps = 7/171 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ V G+S HMY +SG + + + M +V++W +I+ AQ+G A D L +
Sbjct: 450 GFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFF 509
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSR 119
+ M P++ITF+ V+++CS + +G + + + K G S + + ++ + R
Sbjct: 510 DEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDLLGR 569
Query: 120 CGCLDDSVKTFLECE--YSDVVLWSSMIAAYGFHG---KGEEAINLFEQME 165
G L D+ + F+ ++D V+W S++A+ H +G+ N ++E
Sbjct: 570 AGRLADA-EAFISNSIFHADPVIWRSLLASCRIHRDLERGQLVANRIMELE 619
>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1176
Score = 310 bits (795), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 156/408 (38%), Positives = 247/408 (60%), Gaps = 5/408 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ D+ ++L ++Y + G + E + ++ I W L++G AQ+GL E+ L +
Sbjct: 476 GYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVF 535
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G + + TFVS +S+ + LA + QG+QIHA V+K G S + V ++LIS+Y +C
Sbjct: 536 MRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKC 595
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +D+ F E + V W+++I + HG+G EA++LF+QM+++ + NDVTF+ +L
Sbjct: 596 GSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVL 655
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL E+G+ +F M +Y +PR +HY CV+D+ GR G LD A I MP+ A+
Sbjct: 656 AACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAAD 715
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A++W+TLLSACK HK+ ++ A+ +L + P D+A YVLLSN +A ++W + R+
Sbjct: 716 AMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKM 775
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
MR+R V+KEPG SW+E+KN VH F +GD+ HP + +I +L + + GY +
Sbjct: 776 MRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQEKYHL 835
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPFKYISEIKNREI 408
HD + E ++ HSEKLA+ F GL+ + P + IKN +
Sbjct: 836 FHDKEQEGRDPTDLVHSEKLAVTF-----GLMSLPPCMPLRVIKNLRV 878
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 163/314 (51%), Gaps = 8/314 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE D+ L MY K G L + +V+ ++ ++V++W ++IAG Q+ +D L +
Sbjct: 375 GFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAF 434
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G PD I S IS C+ + + QG QIHA + +G S DV + ++L+++Y+RC
Sbjct: 435 KEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARC 494
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + ++ +F E E+ D + W+ +++ + G EEA+ +F +M+Q + N TFVS L
Sbjct: 495 GRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSAL 554
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
A ++ ++G + ++K E ++ L G+CG ++A M + N
Sbjct: 555 SASANLAEIKQGKQIHARVIKT-GHSFETEVGNALISLYGKCGSFEDAKMEFSEMSER-N 612
Query: 241 AIIWKTLLSACKTH----KSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSE 296
+ W T++++C H ++ D+ ++ +E G+ P D +L+ +G+S
Sbjct: 613 EVSWNTIITSCSQHGRGLEALDLFDQMKKE--GIKPNDVTFIGVLAACSHVGLVEEGLSY 670
Query: 297 FREAMRERNVKKEP 310
F+ E ++ P
Sbjct: 671 FKSMSDEYGIRPRP 684
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 130/244 (53%), Gaps = 2/244 (0%)
Query: 7 VAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV 66
+ G+ L +Y K+G ++ +V + R+ ++W+ +++G AQNGL E+ L Y M
Sbjct: 78 IVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRA 137
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
G P SV+SSC++ QG+ IHA+ K G ++ V +++I++Y RCG +
Sbjct: 138 GVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLA 197
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHC 186
+ F + + D V ++++I+ + G GE A+ +FE+M+ + VT SLL AC+
Sbjct: 198 ERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASL 257
Query: 187 GLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKT 246
G +KG + + K + + ++DL +CG + E A +I N + N ++W
Sbjct: 258 GDLQKGTQLHSYLFKAGISSDYIMEGS-LLDLYVKCGDV-ETALVIFNSSDRTNVVLWNL 315
Query: 247 LLSA 250
+L A
Sbjct: 316 MLVA 319
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 136/255 (53%), Gaps = 2/255 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF ++ G+++ +Y++ GS E+V MP R+ + + TLI+G AQ G E L+ +
Sbjct: 173 GFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIF 232
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G PD +T S++++C+ L L +G Q+H+ + KAG S D + SL+ +Y +C
Sbjct: 233 EEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKC 292
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ ++ F + ++VVLW+ M+ A+G ++ LF QM+ N T+ +L
Sbjct: 293 GDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCIL 352
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
C+ + G + L VK + + ++D+ + G+L++A ++ + K +
Sbjct: 353 RTCTCTREIDLGEQIHSLSVKT-GFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEK-D 410
Query: 241 AIIWKTLLSACKTHK 255
+ W ++++ H+
Sbjct: 411 VVSWTSMIAGYVQHE 425
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 121/252 (48%), Gaps = 6/252 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAW-ITLIAGKAQNGLAEDVLDQ 59
G D + SL +Y+K G + + NV+ W + L+A N LA+ +
Sbjct: 274 GISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKS-FEL 332
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ M+ G RP++ T+ ++ +C+ + G+QIH+ VK G D+ V LI MYS+
Sbjct: 333 FCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSK 392
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G L+ + + + DVV W+SMIA Y H ++A+ F++M++ +++ S
Sbjct: 393 YGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASA 452
Query: 180 LYACSHCGLKEKGMEFF-DLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+ C+ +G++ + V Y + + +V+L RCG + EA + + K
Sbjct: 453 ISGCAGINAMRQGLQIHARIYVSGYSGDVSI--WNALVNLYARCGRIREAFSSFEEIEHK 510
Query: 239 ANAIIWKTLLSA 250
+ I W L+S
Sbjct: 511 -DEITWNGLVSG 521
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 14/202 (6%)
Query: 81 SCSELATLGQGQ------QIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
+C+ A G G+ +IHA+ V G V + LI +YS+ G + + + F E
Sbjct: 45 ACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELS 104
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGME 194
D V W +M++ Y +G GEEA+ L+ QM + S+L +C+ L +G
Sbjct: 105 ARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRL 164
Query: 195 FFDLMVKKYRRKPRLEHY--TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACK 252
+ + Y+ E + V+ L RCG A + +MP + + + + TL+S
Sbjct: 165 ---IHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHR-DTVTFNTLISGHA 220
Query: 253 THKSTDMAGRIAEEIL--GVNP 272
+ A I EE+ G++P
Sbjct: 221 QCGHGEHALEIFEEMQFSGLSP 242
>gi|302804548|ref|XP_002984026.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
gi|300148378|gb|EFJ15038.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
Length = 745
Score = 310 bits (795), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 170/450 (37%), Positives = 253/450 (56%), Gaps = 25/450 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ D ++L M+ + GSL + + + + AW T++A AQ +D L Y
Sbjct: 301 GFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFLY 360
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M + GF PD+ TF SV+ SC+ L L +G+ IH G DV + ++L++MY++C
Sbjct: 361 KNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALVNMYAKC 420
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L D+ K+F DVV WS+MIAA HG EEA+ L M + N+VT S+L
Sbjct: 421 GSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNEVTASSVL 480
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
+ACSH G +G+++F + + + + E+ +DLLGR G+L EA ++ MP K +
Sbjct: 481 HACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLHTMPFKVS 540
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+ TLL CK H + + I+ + P++ YVLL+N++A+A RW V++ R
Sbjct: 541 FVALVTLLGGCKVHGDVRRGKALTKRIVALEPENPGSYVLLNNMYAAAGRWDDVAKLRRY 600
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMK-LRGYVPDTGA 359
MR++ VK++ G S +E ++++++F++GD S+PR++EI LE L S MK GYVPDT
Sbjct: 601 MRKKGVKRQTGCSSIEYRDKIYEFSVGDTSNPRNLEIRAELERLYSRMKEEEGYVPDTRD 660
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPFKYISEIKN-------------- 405
HD+ ++KE LK HSEK+A+ F GLI P + IKN
Sbjct: 661 VFHDVSDDKKEELLKFHSEKMAMGF-----GLITSPPGSTLRIIKNLRVCSDCHTVGKLA 715
Query: 406 -----REIIVRDASRFHHFRNGKCSCGDYW 430
R IIVRD +RFHHF G CSCGDYW
Sbjct: 716 SKITGRRIIVRDGTRFHHFEGGICSCGDYW 745
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 135/252 (53%), Gaps = 5/252 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLM-PIRNVIAWITLIAGKAQNGLAEDVLDQ 59
GFE D+V +SL H++ K G L E E V R M +R++I+ +I ++G + LD
Sbjct: 98 GFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDT 157
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
Y MR G PD T+ +++ +CS L G+ IH ++++ ++ V ++LI+MY++
Sbjct: 158 YWKMRSQGLEPDAFTYAAILGACSSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAK 217
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG L DS FL + DVV W++MIAAY +G ++A +LF +M + TF S+
Sbjct: 218 CGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSI 277
Query: 180 LYACSHCGLKEKG-MEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
L AC+ E G M + + + R +++ ++ + RCG L+ A ++ K
Sbjct: 278 LGACASPKRLEDGRMLHVRITARGFDRDFAMQNN--LISMFTRCGSLESARRYFYSIE-K 334
Query: 239 ANAIIWKTLLSA 250
W T+L+A
Sbjct: 335 KELGAWNTMLAA 346
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 142/290 (48%), Gaps = 4/290 (1%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L MY K GSL + + + M +++V++W +IA G +D ++ M +G
Sbjct: 209 NALITMYAKCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHT 268
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
PD TF S++ +C+ L G+ +H + G D + ++LISM++RCG L+ + +
Sbjct: 269 PDIYTFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMFTRCGSLESARRY 328
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F E ++ W++M+AAY KG++A+ L++ M + F + TF S++ +C+ G
Sbjct: 329 FYSIEKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGAL 388
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
+G +F + + T +V++ +CG L +A + K + + W +++
Sbjct: 389 REG-KFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNK-DVVSWSAMIA 446
Query: 250 ACKTHKSTDMAGRIAE--EILGVNPQDAAPYVLLSNIHASAKRWQGVSEF 297
A H + A ++ + G+ + +L + ++G+ F
Sbjct: 447 ASAQHGHAEEALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEGIDYF 496
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 121/247 (48%), Gaps = 3/247 (1%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D + + MY K S + +V + RN +W L+ QN + ++ L+ Y M
Sbjct: 1 DTFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMV 60
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
D T SV+++C++L + +G+ + + + G DV V +SLI ++++CGCL+
Sbjct: 61 RKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLE 120
Query: 125 DSVKTFLEC-EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
++ F D++ ++MI AY HGK + A++ + +M + E + T+ ++L AC
Sbjct: 121 EAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGAC 180
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
S G +++ + + ++ + +CG L ++ +L M VK + +
Sbjct: 181 SSPDFLLDGKHIHKHILES-KHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVK-DVVS 238
Query: 244 WKTLLSA 250
W +++A
Sbjct: 239 WNAMIAA 245
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 76/159 (47%), Gaps = 9/159 (5%)
Query: 106 DVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQME 165
D + + +I MY +C +D+ + F + + WS ++ Y + +EA+ ++++M
Sbjct: 1 DTFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMV 60
Query: 166 QKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEH----YTCVVDLLGR 221
+KE + T S+L AC+ E+G MV++ + E T ++ L +
Sbjct: 61 RKEISIDAYTLSSVLAACTKLLDVEEGR-----MVQRKAEELGFEKDVVVATSLIHLFAK 115
Query: 222 CGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMA 260
CG L+EA ++ R+M + I ++ A H D+A
Sbjct: 116 CGCLEEAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLA 154
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 310 bits (795), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 161/448 (35%), Positives = 249/448 (55%), Gaps = 46/448 (10%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E +L ++L MY K GS+ V M ++++I+W T+I
Sbjct: 384 ESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGE---------------- 427
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
+PD T V+ +C+ L+ L +G++IH +++ G S D V ++L+ +Y +CG
Sbjct: 428 -----LKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGV 482
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
L + F D+V W+ MIA YG HG G EAI F +M E ++V+F+S+LYA
Sbjct: 483 LGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYA 542
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
CSH GL E+G FF +M + +P+LEHY C+VDLL R G L +A I +P+ +A
Sbjct: 543 CSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDAT 602
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMR 302
IW LL C+ + ++A ++AE + + P+++ YVLL+NI+A A++W+ V RE +
Sbjct: 603 IWGALLCGCRNYHDIELAEKVAERVFELEPENSGYYVLLANIYAEAEKWEEVKRLREKIG 662
Query: 303 ERNVKKEPGVSWLEIKNQVHQFTMGDK-SHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
++ ++K PG SW+EIK +V+ F G+ SHP S I+ L+++ +MK G+ P T +
Sbjct: 663 KQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHFPKTKYAL 722
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPFKYISEIKN---------------- 405
+ D +KE L HSEKLA+AF GL+ + P K I KN
Sbjct: 723 INADEMQKEMALCGHSEKLAMAF-----GLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSK 777
Query: 406 ---REIIVRDASRFHHFRNGKCSCGDYW 430
REI++RD +RFHHF++G CSC +W
Sbjct: 778 ETRREIVLRDPNRFHHFKDGYCSCRGFW 805
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 120/223 (53%), Gaps = 2/223 (0%)
Query: 35 RNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQI 94
R+VI+W ++I+G NGL E L Y M +G D T +SV+ C+ TL G+ +
Sbjct: 214 RDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAV 273
Query: 95 HAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKG 154
H+ +K+ + ++L+ MYS+CG LD +++ F + +VV W+SMIA Y G+
Sbjct: 274 HSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRS 333
Query: 155 EEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC 214
+ AI L +QME++ + + V S+L+AC+ G + G + D +K + L
Sbjct: 334 DGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDY-IKANNMESNLFVCNA 392
Query: 215 VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKST 257
++D+ +CG ++ A ++ M VK + I W T++ K T
Sbjct: 393 LMDMYAKCGSMEAANSVFSTMVVK-DIISWNTMIGELKPDSRT 434
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 125/294 (42%), Gaps = 25/294 (8%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
FE + ++L MY K G L +V M RNV++W ++IAG ++G ++ +
Sbjct: 282 FERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQ 341
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M G + D + S++ +C+ +L G+ +H + ++ V ++L+ MY++CG
Sbjct: 342 QMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCG 401
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
++ + F D++ W++MI E + + T +L
Sbjct: 402 SMEAANSVFSTMVVKDIISWNTMIG---------------------ELKPDSRTMACVLP 440
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
AC+ E+G E +++ R +VDL +CG L A L +P K +
Sbjct: 441 ACASLSALERGKEIHGYILRNGYSSDR-HVANALVDLYVKCGVLGLARLLFDMIPSK-DL 498
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLSNIHASAKRWQG 293
+ W +++ H + A E+ G+ P + + +L S QG
Sbjct: 499 VSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQG 552
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 88/174 (50%), Gaps = 10/174 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ D ++L +Y+K G L + ++P +++++W +IAG +G + + +
Sbjct: 462 GYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATF 521
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV--ISSLISMYS 118
N MR G PD+++F+S++ +CS L QG + ++K +++ + + ++ + S
Sbjct: 522 NEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFY-IMKNDFNIEPKLEHYACMVDLLS 580
Query: 119 RCGCLDDSVKTFLECE--YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFE 170
R G L + + F+E D +W +++ + I L E++ ++ FE
Sbjct: 581 RTGNLSKAYE-FIETLPIAPDATIWGALLCGC----RNYHDIELAEKVAERVFE 629
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 99/245 (40%), Gaps = 53/245 (21%)
Query: 74 TFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK----- 128
T+ SV+ C+ L + G+++H+ + +D + L+S Y+ CG L + +
Sbjct: 101 TYSSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTM 160
Query: 129 --------TFLECEYS--------------------------------------DVVLWS 142
F+ EY+ DV+ W+
Sbjct: 161 EKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWN 220
Query: 143 SMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKK 202
SMI+ Y +G E + +++QM + + T +S+L C++ G G L +K
Sbjct: 221 SMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKS 280
Query: 203 YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGR 262
+ R+ ++D+ +CG LD A + M + N + W ++++ +D A +
Sbjct: 281 SFER-RINFSNTLLDMYSKCGDLDGALRVFEKMGER-NVVSWTSMIAGYTRDGRSDGAIK 338
Query: 263 IAEEI 267
+ +++
Sbjct: 339 LLQQM 343
>gi|357124213|ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 637
Score = 310 bits (795), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 164/441 (37%), Positives = 254/441 (57%), Gaps = 15/441 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ + L MY K G + + V + +R+ + W ++IA QNG + L M
Sbjct: 197 DMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAAYGQNGRPMEALSLCRDMA 256
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G P T VS IS+ ++ A L +G+++H + G + +SL+ MY++ G +
Sbjct: 257 ANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDRQDKLKTSLVDMYAKSGWVQ 316
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQME-QKEFEANDVTFVSLLYAC 183
+ F + ++V W++MI YG HG +EA+ LF +M + + +++TFV +L AC
Sbjct: 317 VARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMRVEAQVTPDNITFVGVLSAC 376
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
+H G+ ++ EFF LMV Y KP ++H+TC+VD+LG G +EA LI+ MP++ ++ I
Sbjct: 377 NHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHAGRFEEAYDLIKGMPMQPDSGI 436
Query: 244 WKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
W LL+ CK HK+ ++ ++++ + P+DA YVLLSNI+A + +W+ + R+ M
Sbjct: 437 WGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVLLSNIYAQSGKWEKAARVRKLMTN 496
Query: 304 RNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHD 363
R +KK G SW+E+K + H F +GD SHPRS EI LE L M GY+PDT HD
Sbjct: 497 RGLKKIIGCSWIELKGKTHGFLVGDASHPRSAEIYEELERLEGLMSDAGYMPDTMPVFHD 556
Query: 364 MDSEEKEYNLKHHSEKLAIAFA-----EHTRGLIVM---------LPFKYISEIKNREII 409
+ +EK ++ HSE+LAIAF T+ L+ + K IS+I REII
Sbjct: 557 VGDDEKRNMMRSHSERLAIAFGLISTPSGTKLLVTKNLRVCEDCHVVIKLISQIVQREII 616
Query: 410 VRDASRFHHFRNGKCSCGDYW 430
+RD +R+HHF NG+CSC DYW
Sbjct: 617 IRDVNRYHHFVNGECSCKDYW 637
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 122/261 (46%), Gaps = 4/261 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G D V + L +Y G + ++ MP RNV W LI A++G E + Y
Sbjct: 92 GLGPDTVLATKLVDLYAACGLVGHARRLFDGMPKRNVFLWNVLIRAYARDGPHEVAIQLY 151
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G PD T+ + +C+ L L G+++H V+ D+ V + L+ MY++C
Sbjct: 152 RGMVDYGVEPDNFTYPLALKACAALLDLETGREVHERVLGTHWGEDMFVCAGLVDMYAKC 211
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
GC+DD+ F D V+W+SMIAAYG +G+ EA++L M T VS +
Sbjct: 212 GCVDDARAVFDRIRVRDSVVWNSMIAAYGQNGRPMEALSLCRDMAANGVGPTIATLVSTI 271
Query: 181 YACSHCGLKEKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
A + +G E ++ + R+ +L+ T +VD+ + G++ A L + +K
Sbjct: 272 SAAADAAALPRGRELHGFGWRRGFDRQDKLK--TSLVDMYAKSGWVQVARVLFEQL-MKR 328
Query: 240 NAIIWKTLLSACKTHKSTDMA 260
+ W ++ H D A
Sbjct: 329 ELVSWNAMICGYGMHGHFDEA 349
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 94/178 (52%), Gaps = 6/178 (3%)
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
+ SV+ SC +LG G+Q+H ++ +G D + + L+ +Y+ CG + + + F
Sbjct: 65 YTSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLFDGMP 124
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGME 194
+V LW+ +I AY G E AI L+ M E ++ T+ L AC+ E G E
Sbjct: 125 KRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETGRE 184
Query: 195 FFDLMVKKYRRKPRLEHYTC--VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+ ++ + + + + C +VD+ +CG +D+A A+ + V+ ++++W ++++A
Sbjct: 185 VHERVLGTHWGE---DMFVCAGLVDMYAKCGCVDDARAVFDRIRVR-DSVVWNSMIAA 238
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ +SL MY KSG + + + R +++W +I G +G ++ L +
Sbjct: 294 GFDRQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLF 353
Query: 61 NLMRM-VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYS 118
N MR+ PD ITFV V+S+C+ + + ++ +V V + L+ +
Sbjct: 354 NKMRVEAQVTPDNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLG 413
Query: 119 RCGCLDDSVKTFLECEYS-DVVLWSSMIAAYGFHGK---GEEAINLFEQMEQKEFEANDV 174
G +++ D +W +++ H GE A+ ++E + +A +
Sbjct: 414 HAGRFEEAYDLIKGMPMQPDSGIWGALLNGCKIHKNVELGELALQKLIELEPE--DAGNY 471
Query: 175 TFVSLLYACSHCGLKEKGMEFFDLMVKKYRRK 206
+S +YA S G EK LM + +K
Sbjct: 472 VLLSNIYAQS--GKWEKAARVRKLMTNRGLKK 501
>gi|414867973|tpg|DAA46530.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
Length = 923
Score = 310 bits (795), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 159/440 (36%), Positives = 257/440 (58%), Gaps = 24/440 (5%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+SL MY G L + + ++VI+W +IA ++G E+ + + + G +
Sbjct: 489 NSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDSQHAGNK 548
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
D+ +SS + LA+L +G Q+H VK G D V+++ + MY +CG +D +KT
Sbjct: 549 LDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKT 608
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
+ + W+++I+ Y +G +EA + F+ M + + VTFV+LL ACSH GL
Sbjct: 609 LPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSACSHAGLI 668
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
+KGM++++ M + P ++H C+VDLLGR G EA I MPV N +IW++LLS
Sbjct: 669 DKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPNDLIWRSLLS 728
Query: 250 ACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKE 309
+ +THK+ D+ + A+ +L ++P D + YVLLSN++A+ RW V + R M+ + K
Sbjct: 729 SSRTHKNLDIGRKAAKNLLELDPFDDSAYVLLSNLYATNARWVDVDKLRSHMKTIKLNKR 788
Query: 310 PGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEK 369
P SWL++KN+V F +GD+SH + +I + L+E+ +++ GYV DT + +HD D E+K
Sbjct: 789 PACSWLKLKNEVSTFGIGDRSHMHAEKIYVKLDEILLKLREVGYVADTSSALHDTDEEQK 848
Query: 370 EYNLKHHSEKLAIAFAEHTRGLIVM-------------------LPFKYISEIKNREIIV 410
E+NL +HSEKLA+A+ GL+V+ L FK +S + +REI++
Sbjct: 849 EHNLWNHSEKLALAY-----GLLVVPEGSTIRIFKNLRVCADCHLVFKLVSMVFHREIVL 903
Query: 411 RDASRFHHFRNGKCSCGDYW 430
RD RFH F++G CSC D+W
Sbjct: 904 RDPYRFHQFKHGSCSCSDFW 923
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 125/252 (49%), Gaps = 15/252 (5%)
Query: 6 LVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRM 65
L+ G+SL MY K S+ + E+V MP +V++ L G A + + ++ MR
Sbjct: 383 LLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWMRG 442
Query: 66 VGFRPDKITFVSVISSCSELATL-GQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G +P+ IT +++ +C L L G +HA V + G D + +SLI+MY+ CG L+
Sbjct: 443 TGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLE 502
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
S F V+ W+++IAA HG+GEEAI LF + + + L + +
Sbjct: 503 SSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSA 562
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVV----DLLGRCGYLDEAAALIRNMPVKAN 240
+ E+GM+ L VK L+ + VV D+ G+CG +D +++ +P A+
Sbjct: 563 NLASLEEGMQLHGLSVKN-----GLDCDSHVVNATMDMYGKCGKMD---CMLKTLPDPAH 614
Query: 241 --AIIWKTLLSA 250
W TL+S
Sbjct: 615 RPTQCWNTLISG 626
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 117/252 (46%), Gaps = 6/252 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G ++ G++L H+Y G ++ +++ MP RNV++W ++ + NG E+ L Y
Sbjct: 74 GLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGCMEEALVAY 133
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
MR G + +V+S C L G Q+ A VV +G V V +SLI+M+
Sbjct: 134 RRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLITMFGNL 193
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
+ D+ + F E D + W++MI+ Y + + M E + + T SL+
Sbjct: 194 RRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVTTLCSLV 253
Query: 181 YACSHCGLKEKGMEFFDLMVKK--YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
C+ L G L V + P + +V++ G LDEA +L RNM +
Sbjct: 254 SVCASSDLVALGSGIHSLCVSSGLHCSVPLIN---ALVNMYSTAGKLDEAESLFRNMS-R 309
Query: 239 ANAIIWKTLLSA 250
+ I W T++S+
Sbjct: 310 RDVISWNTMISS 321
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 116/248 (46%), Gaps = 6/248 (2%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY-NLMRMVGF 68
++L +MY +G L E E + R M R+VI+W T+I+ Q+ + L+ L++
Sbjct: 285 NALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEG 344
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
P+ +TF S + +CS L G+ IHA +++ + + +SL++MYS+C ++D+ +
Sbjct: 345 PPNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTER 404
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCG- 187
F DVV + + Y A+ +F M + N +T ++L C G
Sbjct: 405 VFESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGD 464
Query: 188 LKEKGMEFFDLMVKKYRRKPRLEHYT-CVVDLLGRCGYLDEAAALIRNMPVKANAIIWKT 246
L GM + + E+ T ++ + CG L+ + + + K+ I W
Sbjct: 465 LHSYGMPLHAYVTQTGLLSD--EYITNSLITMYATCGDLESSTGIFSRINNKS-VISWNA 521
Query: 247 LLSACKTH 254
+++A H
Sbjct: 522 IIAANVRH 529
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 112/239 (46%), Gaps = 6/239 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + +SL M+ + + E++ M R+ I+W +I+ + +
Sbjct: 175 GLLTHVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVL 234
Query: 61 NLMRMVGFRPDKITFVSVISSC--SELATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
+ MR +PD T S++S C S+L LG G IH+ V +G V +I++L++MYS
Sbjct: 235 SDMRHGEVKPDVTTLCSLVSVCASSDLVALGSG--IHSLCVSSGLHCSVPLINALVNMYS 292
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQK-EFEANDVTFV 177
G LD++ F DV+ W++MI++Y EA+ Q+ Q E N +TF
Sbjct: 293 TAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFS 352
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
S L ACS G +++++ + L + ++ + +C +++ + +MP
Sbjct: 353 SALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNS-LLTMYSKCNSMEDTERVFESMP 410
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 70/155 (45%), Gaps = 3/155 (1%)
Query: 32 MPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELA---TL 88
MP R +W T ++G A+ GL +MR S++++C
Sbjct: 1 MPHRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGA 60
Query: 89 GQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAY 148
G IHA +AG +V + ++L+ +Y G + ++ + F E +VV W++++ A
Sbjct: 61 ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVAL 120
Query: 149 GFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
+G EEA+ + +M ++ N +++ C
Sbjct: 121 SSNGCMEEALVAYRRMRKEGVMCNANALATVVSLC 155
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 310 bits (795), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 167/451 (37%), Positives = 256/451 (56%), Gaps = 26/451 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF +L ++L +Y+K G + + + ++VI+W TLI G L ++ L +
Sbjct: 250 GFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLF 309
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVK--AGASLDVGVISSLISMYS 118
M G P+ +T +S++ +C+ L + G+ IH + K G + +SLI MY+
Sbjct: 310 QEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYA 369
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+CG ++ + + F + W++MI + HG+ A ++F +M + E E +D+TFV
Sbjct: 370 KCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVG 429
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
LL ACSH G+ + G F M + Y+ P+LEHY C++DLLG G EA +I M ++
Sbjct: 430 LLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEME 489
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
+ +IW +LL ACK H + ++ A+ ++ + P++ YVLLSNI+A+A RW V++ R
Sbjct: 490 PDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIR 549
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
+ ++ +KK PG S +EI + VH+F +GDK HPR+ EI LEE+ ++ G+VPDT
Sbjct: 550 ALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTS 609
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKY 399
+ +M+ E KE L+HHSEKLAIAF GLI P K
Sbjct: 610 EVLQEMEEEWKEGALRHHSEKLAIAF-----GLISTKPGTKLTIVKNLRVCRNCHEATKL 664
Query: 400 ISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
IS+I REII RD +RFHHFR+G CSC DYW
Sbjct: 665 ISKIYKREIIARDRTRFHHFRDGVCSCNDYW 695
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 155/302 (51%), Gaps = 5/302 (1%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+V+ ++L Y G + +K+ +PI++V++W +I+G A+ G ++ L+ + M
Sbjct: 153 DVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMM 212
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
RPD+ T VSV+S+C++ A++ G+Q+H+ + G ++ ++++LI +Y +CG ++
Sbjct: 213 KTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVE 272
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ F Y DV+ W+++I Y +EA+ LF++M + NDVT +S+L AC+
Sbjct: 273 TACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACA 332
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRL-EHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
H G E G + K+ + H T ++D+ +CG + EAA + + + +
Sbjct: 333 HLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDI-EAAQQVFDSILNRSLSS 391
Query: 244 WKTLLSACKTHKSTDMAGRIAEEILG--VNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
W ++ H + A I + + P D LLS S G FR +M
Sbjct: 392 WNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFR-SM 450
Query: 302 RE 303
+E
Sbjct: 451 KE 452
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 124/279 (44%), Gaps = 35/279 (12%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
N++ W T+ G A + L Y M +G P+ TF ++ SC++ +GQQIH
Sbjct: 52 NLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIH 111
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY-------------------- 135
V+K G LD+ V +SLISMY + G L+D+ K F + +
Sbjct: 112 GHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIA 171
Query: 136 -----------SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
DVV W++MI+ Y G +EA+ LF++M + ++ T VS++ AC+
Sbjct: 172 SAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACA 231
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
E G + + + L+ ++DL +CG ++ A L + K + I W
Sbjct: 232 QSASIELGRQVHS-WIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYK-DVISW 289
Query: 245 KTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLL 281
TL+ A + +E+L G +P D +L
Sbjct: 290 NTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSIL 328
>gi|357485423|ref|XP_003612999.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355514334|gb|AES95957.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 676
Score = 310 bits (795), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 172/445 (38%), Positives = 251/445 (56%), Gaps = 16/445 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E + + +SL MY K + + KV + + + W + I G QNG E L +
Sbjct: 233 GLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMF 292
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M P+ TF S++ +CS LA L G+QIHA VK G + V ++LI +Y +C
Sbjct: 293 REMIRCSISPNHFTFSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKC 352
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ + F DVV ++MI AY +G G EA+ LFE+M++ + N VTF+S+L
Sbjct: 353 GNVEKARSVFESLTELDVVSINTMIYAYAQNGFGHEALELFERMKKLGHKPNVVTFISIL 412
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC++ GL E+G + F L+ + + +HYTC++DLLGR +EAA LI +
Sbjct: 413 LACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEAAMLIEEGK-NPD 471
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
I W+TLL+ACK H +MA + +++L P+D ++LL+NI+ASA +W V E + A
Sbjct: 472 VIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIEMKSA 531
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
R+ +KK P +SW++I +VH F GD SHPR+ EI L EL ++ GY PDT
Sbjct: 532 GRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRAHEISEMLHELIEKVITLGYNPDTKFV 591
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAE-HTRGLIVMLPF--------------KYISEIKN 405
+ D++ E+K L +HSEKLAIAFA T G + K++S +
Sbjct: 592 LQDLEEEKKISALYYHSEKLAIAFALWKTCGKNTAIRIFKNLRVCGDCHSWIKFVSLLTG 651
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
R+II RDA RFHHF+ G CSC DYW
Sbjct: 652 RDIIARDAKRFHHFKGGICSCKDYW 676
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 127/249 (51%), Gaps = 6/249 (2%)
Query: 1 GFEL-DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQ 59
GFE+ D + + MY K G + + V + ++V+ + LI G Q GL + L+
Sbjct: 131 GFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQRGLDGEALEV 190
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ M +P++ T SV+ SC L L G+ IH VVK+G V +SL++MYS+
Sbjct: 191 FEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSK 250
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
C ++DS+K F Y+ V W+S I +G+ E A+++F +M + N TF S+
Sbjct: 251 CNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCSISPNHFTFSSI 310
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP--- 236
L+ACS + E G + + VK + ++ L G+CG +++A ++ ++
Sbjct: 311 LHACSSLAMLEAGEQIHAVTVKLGVDGNKYVD-AALIHLYGKCGNVEKARSVFESLTELD 369
Query: 237 -VKANAIIW 244
V N +I+
Sbjct: 370 VVSINTMIY 378
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 117/241 (48%), Gaps = 3/241 (1%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G L Y+K + E K+ MP R+++ W ++I+ G ++ ++ Y+ M G
Sbjct: 38 GHKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSRGKTKEAIELYDNMLFEGV 97
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISS-LISMYSRCGCLDDSV 127
PD TF ++ + SE+ +GQ+ H V G + G +++ ++ MY++ G + D+
Sbjct: 98 LPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDAR 157
Query: 128 KTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCG 187
F DVVL++++I Y G EA+ +FE M + N+ T S+L +C + G
Sbjct: 158 FVFDRVLDKDVVLFTALIVGYNQRGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLG 217
Query: 188 LKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTL 247
G L+VK + + T ++ + +C ++++ + ++ A+ + W +
Sbjct: 218 DLVNGKLIHGLVVKS-GLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAY-ASHVTWTSF 275
Query: 248 L 248
+
Sbjct: 276 I 276
>gi|21780142|gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thaliana]
Length = 603
Score = 310 bits (794), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 159/450 (35%), Positives = 254/450 (56%), Gaps = 25/450 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + ++ +L +MY + + V + V+ + +I G A+ + L +
Sbjct: 159 GLDDNVYVCPTLINMYTECEDVDSARXVFDRIVEPCVVCYNAMITGYARRNRPNEALSLF 218
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ +P++IT +SV+SSC+ L +L G+ IH K V V ++LI M+++C
Sbjct: 219 REMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKC 278
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G LDD+V F + Y D WS+MI AY HGK E+++ +FE+M + + +++TF+ LL
Sbjct: 279 GSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLL 338
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH G E+G ++F MV K+ P ++HY +VDLL G L++A I +P+
Sbjct: 339 NACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSXAGNLEDAYEFIDKLPISPT 398
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
++W+ LL+AC +H + D+A +++E I ++ YV+LSN++A K+W+ V R+
Sbjct: 399 PMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKV 458
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M++R K PG S +E+ N VH+F GD + ++ L+E+ E+KL GYVPDT
Sbjct: 459 MKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMV 518
Query: 361 MH-DMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPFKYISEIKN-------------- 405
+H +M+ +EKE L++HSEKLAI F GL+ P I +KN
Sbjct: 519 VHANMNDQEKEITLRYHSEKLAITF-----GLLNTPPGTTIRVVKNLRVCRDCHNAAKLI 573
Query: 406 -----REIIVRDASRFHHFRNGKCSCGDYW 430
R+++ RD RFHHF +GKCSCGD+W
Sbjct: 574 SLIFGRKVVXRDVQRFHHFEDGKCSCGDFW 603
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 116/241 (48%), Gaps = 16/241 (6%)
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
G PD TF S++ +C+ L +G+Q+H +K G +V V +LI+MY+ C +D +
Sbjct: 124 GILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSA 183
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHC 186
F VV +++MI Y + EA++LF +M+ K + N++T +S+L +C+
Sbjct: 184 RXVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALL 243
Query: 187 GLKEKGMEFFDLMVKKYRRKPRLEHY----TCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
G + G + KY +K Y T ++D+ +CG LD+A ++ M K +
Sbjct: 244 GSLDLGK-----WIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYK-DTQ 297
Query: 243 IWKTLLSACKTH----KSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
W ++ A H KS M R+ E V P + LL+ + + +G F
Sbjct: 298 AWSAMIVAYANHGKAEKSMLMFERMRSE--NVQPDEITFLGLLNACSHTGRVEEGRKYFS 355
Query: 299 E 299
+
Sbjct: 356 Q 356
>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
Length = 842
Score = 310 bits (794), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 162/440 (36%), Positives = 258/440 (58%), Gaps = 15/440 (3%)
Query: 6 LVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR- 64
+V +S+ Y+++G + + MP +N+++W T+I+G Q L E+ ++ + M+
Sbjct: 403 VVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQS 462
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G D +T +S+ S+C L L + I+ + K G LDV + ++L+ M+SRCG +
Sbjct: 463 QEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPE 522
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
++ F DV W++ I A G E AI LF+ M ++ + + V FV L ACS
Sbjct: 523 SAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACS 582
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL ++G E F M+K + P HY C+VDLLGR G L+EA LI +MP++ N +IW
Sbjct: 583 HGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIW 642
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
+LL+AC+ + +MA AE+I + P+ YVLLSN++ASA RW +++ R +M+E+
Sbjct: 643 NSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEK 702
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
++K PG S ++I+ + H+FT GD+SHP I+ L+E++ G+VPD + D+
Sbjct: 703 GLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDV 762
Query: 365 DSEEKEYNLKHHSEKLAIAFA--EHTRGLIVMLP------------FKYISEIKNREIIV 410
D +EK + L HSEKLA+A+ +G + + K+ S++ NREII+
Sbjct: 763 DEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIIL 822
Query: 411 RDASRFHHFRNGKCSCGDYW 430
RD +RFH+ R GKCSCGD+W
Sbjct: 823 RDNNRFHYIRQGKCSCGDFW 842
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 133/281 (47%), Gaps = 32/281 (11%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ DL +SL H Y + G L KV M RNV++W ++I G A+ A+D +D +
Sbjct: 164 GYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLF 223
Query: 61 -NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
++R P+ +T V VIS+C++L L G++++A + +G ++ ++S+L+ MY +
Sbjct: 224 FRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMK 283
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
C +D + + F E S++ L ++M + Y G EA+ +F M + ++ +S
Sbjct: 284 CNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSA 343
Query: 180 LYACS-----------HCGLKEKGME--------FFDLMVKKYRRKP------RLEHYTC 214
+ +CS H + G E D+ +K +R+ R+ + T
Sbjct: 344 ISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTV 403
Query: 215 VVDLLGRCGY-----LDEAAALIRNMPVKANAIIWKTLLSA 250
V GY +D A MP K N + W T++S
Sbjct: 404 VTWNSIVAGYVENGEVDAAWETFETMPEK-NIVSWNTIISG 443
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 101/203 (49%), Gaps = 24/203 (11%)
Query: 42 TLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA 101
+LI G A +GL + + + M G PDK TF +S+C++ G G QIH +VK
Sbjct: 104 SLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKM 163
Query: 102 GASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLF 161
G + D+ V +SL+ Y+ CG LD + K F E +VV W+SMI Y ++A++LF
Sbjct: 164 GYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLF 223
Query: 162 EQM-EQKEFEANDVTFVSLLYACS-----------HCGLKEKGMEFFDLMVKKYRRKPRL 209
+M +E N VT V ++ AC+ + ++ G+E DLMV
Sbjct: 224 FRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMV--------- 274
Query: 210 EHYTCVVDLLGRCGYLDEAAALI 232
+ +VD+ +C +D A L
Sbjct: 275 ---SALVDMYMKCNAIDVAKRLF 294
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 122/267 (45%), Gaps = 33/267 (12%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E++ + S+L MYMK ++ +++ N+ + + + GL + L +
Sbjct: 266 GIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVF 325
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
NLM G RPD+I+ +S ISSCS+L + G+ H V++ G + ++LI MY +C
Sbjct: 326 NLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKC 385
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGK--------------------------- 153
D + + F VV W+S++A Y +G+
Sbjct: 386 HRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLV 445
Query: 154 ----GEEAINLFEQMEQKE-FEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPR 208
EEAI +F M+ +E A+ VT +S+ AC H G + ++ ++K +
Sbjct: 446 QGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLA-KWIYYYIEKNGIQLD 504
Query: 209 LEHYTCVVDLLGRCGYLDEAAALIRNM 235
+ T +VD+ RCG + A ++ ++
Sbjct: 505 VRLGTTLVDMFSRCGDPESAMSIFNSL 531
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 85/168 (50%), Gaps = 4/168 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +LD+ G++L M+ + G + + R+V AW I A G AE ++ +
Sbjct: 500 GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELF 559
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSR 119
+ M G +PD + FV +++CS + QG++I ++K G S + ++ + R
Sbjct: 560 DDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGR 619
Query: 120 CGCLDDSVKTF--LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQME 165
G L+++V+ + E +DV+ W+S++AA G E A E+++
Sbjct: 620 AGLLEEAVQLIEDMPMEPNDVI-WNSLLAACRVQGNVEMAAYAAEKIQ 666
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 72/173 (41%), Gaps = 6/173 (3%)
Query: 80 SSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC---LDDSVKTFLECE-Y 135
SS T+ + + H + K G DV I+ L++ G L + + F E Y
Sbjct: 37 SSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESY 96
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
+++S+I Y G EAI LF +M + TF L AC+ K G++
Sbjct: 97 GTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQI 156
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
L+VK K + +V CG LD A + M + N + W +++
Sbjct: 157 HGLIVKMGYAKDLFVQNS-LVHFYAECGELDSARKVFDEMSER-NVVSWTSMI 207
>gi|449434268|ref|XP_004134918.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Cucumis sativus]
gi|449533166|ref|XP_004173548.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Cucumis sativus]
Length = 712
Score = 310 bits (794), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 163/410 (39%), Positives = 233/410 (56%), Gaps = 14/410 (3%)
Query: 35 RNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQI 94
RNV+ W L+ G N D L + M + P++ + S ++SC L + +G+++
Sbjct: 303 RNVVVWTALLTGYGLNCRHTDALQVFKGMMRMSVLPNQSSLTSALNSCCGLEAVDRGREV 362
Query: 95 HAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKG 154
HA K G D+ V +SL+ MY++CG ++D + F +VV W+S+I HG G
Sbjct: 363 HAVAHKLGLESDIFVSNSLVVMYTKCGHINDGIAVFTRMSRKNVVSWNSIIVGCAQHGFG 422
Query: 155 EEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC 214
A+ LF QM + + +++T LL AC H G+ KG FF K + + EHY+
Sbjct: 423 RWALTLFAQMIRTRVDPDEITLAGLLSACGHSGMLTKGRCFFKHFGKNFGIEMTNEHYSS 482
Query: 215 VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQD 274
+VDLLGR G L+EA ALI MP KAN ++W LLS+ H + +A R A+ +L + P
Sbjct: 483 MVDLLGRYGQLEEAEALIHIMPGKANYMVWLALLSSSINHSNVHVAERAAKCVLDLQPNC 542
Query: 275 AAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRS 334
+A Y LLSN++AS +W VS+ R+ M++ + K+PG SW+ IK H F GD+SHP S
Sbjct: 543 SAAYTLLSNLYASTGKWTEVSKIRKKMKDEGILKQPGSSWITIKGIKHNFISGDQSHPLS 602
Query: 335 MEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFA----EHTRG 390
+I LE L ++K GYVPD HD+++E+KE L +HSE+LAI F
Sbjct: 603 RKIYQKLEWLGGKLKELGYVPDPKFSFHDVETEQKEEMLSYHSERLAIGFGLISTVEGST 662
Query: 391 LIVMLPF----------KYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+IVM K S++ REI+VRD SRFHHF NG CSCGDYW
Sbjct: 663 IIVMKNLRICGDCHNAVKLTSKVVGREIVVRDPSRFHHFHNGTCSCGDYW 712
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 130/252 (51%), Gaps = 7/252 (2%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+ A +S+ H + +G + + ++ MP RNVI+W ++I G NG + + L ++ M
Sbjct: 173 DVTAWNSMVHGFFSNGRVEDAIELFEKMPNRNVISWTSVIGGLDHNGRSFEALVVFHKM- 231
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+ F+ T +++C+ + T G QIH +VK G + + +SLIS Y+ C +D
Sbjct: 232 LASFKATSSTLACALTACANICTPFIGVQIHGLIVKTGYCFNEYISASLISFYANCKLID 291
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
++ F + +VV+W++++ YG + + +A+ +F+ M + N + S L +C
Sbjct: 292 NASSIFNDNVSRNVVVWTALLTGYGLNCRHTDALQVFKGMMRMSVLPNQSSLTSALNSC- 350
Query: 185 HCGLK--EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
CGL+ ++G E + K + + +V + +CG++++ A+ M K N +
Sbjct: 351 -CGLEAVDRGRE-VHAVAHKLGLESDIFVSNSLVVMYTKCGHINDGIAVFTRMSRK-NVV 407
Query: 243 IWKTLLSACKTH 254
W +++ C H
Sbjct: 408 SWNSIIVGCAQH 419
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 112/236 (47%), Gaps = 13/236 (5%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y G L + K+ MP++++I+W +++ G + G D+ N+ + R + +++
Sbjct: 91 YADEGRLEDALKLFYEMPVKDLISWNSMLKGCLKCG---DLTMACNMFDKMSER-NVVSW 146
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
++I+ E + ++ + + + DV +S++ + G ++D+++ F +
Sbjct: 147 TTIINGLLEFGRV----EVAECLFRVMPTKDVTAWNSMVHGFFSNGRVEDAIELFEKMPN 202
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
+V+ W+S+I +G+ EA+ +F +M F+A T L AC++ G++
Sbjct: 203 RNVISWTSVIGGLDHNGRSFEALVVFHKM-LASFKATSSTLACALTACANICTPFIGVQI 261
Query: 196 FDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
L+VK Y + ++ C +D A++ I N V N ++W LL+
Sbjct: 262 HGLIVKTGYCFNEYIS--ASLISFYANCKLIDNASS-IFNDNVSRNVVVWTALLTG 314
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 68/148 (45%), Gaps = 10/148 (6%)
Query: 103 ASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFE 162
+S V + + +I Y+ G L+D++K F E D++ W+SM+ G A N+F+
Sbjct: 77 SSPGVNLYTMMIGGYADEGRLEDALKLFYEMPVKDLISWNSMLKGCLKCGDLTMACNMFD 136
Query: 163 QMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRC 222
+M ++ N V++ +++ G E F +M K + + +V
Sbjct: 137 KMSER----NVVSWTTIINGLLEFGRVEVAECLFRVMPTK-----DVTAWNSMVHGFFSN 187
Query: 223 GYLDEAAALIRNMPVKANAIIWKTLLSA 250
G +++A L MP + N I W +++
Sbjct: 188 GRVEDAIELFEKMPNR-NVISWTSVIGG 214
>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like, partial [Cucumis sativus]
Length = 658
Score = 310 bits (794), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 172/448 (38%), Positives = 248/448 (55%), Gaps = 27/448 (6%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
FE D+V SL MY K G + M N+I W +I+G A NG E+ + +
Sbjct: 219 FEPDIVI--SLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFR 276
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M R D IT S + + +++ +L + + + K+ D V + LI MY++CG
Sbjct: 277 EMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCG 336
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+ + F DVVLWS MI YG HG G+EAI L+ +M+Q ND TF+ LL
Sbjct: 337 SIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLT 396
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
AC + GL ++G E F LM + +P +HY+CVVDLLGR GYL++A I +MP+K
Sbjct: 397 ACKNSGLVKEGWELFHLM-PDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGV 455
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
+W LLSACK H+ + AE++ ++P + YV LSN++ASA W V+ R M
Sbjct: 456 SVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMM 515
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
++ + K+ G S +EI + F +GD+SHP+S EI L+ L +K GYVP + +
Sbjct: 516 TQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDRLEKRLKAAGYVPHMESVL 575
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISE 402
HD++ EE E L HHSE+LA+A+ G+I P K IS+
Sbjct: 576 HDLNHEEIEETLCHHSERLAVAY-----GIISTAPGTTLRITKNLRACINCHSAIKLISK 630
Query: 403 IKNREIIVRDASRFHHFRNGKCSCGDYW 430
+ +REII+RDA RFHHF++G CSCGD+W
Sbjct: 631 LVDREIIIRDAKRFHHFKDGVCSCGDFW 658
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 139/284 (48%), Gaps = 4/284 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF ++ +SL MY K G + V + R V++W ++I+G QNG + L+ +
Sbjct: 115 GFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVF 174
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
MR +PD I VSV+++ + + LGQG+ IH V K G + ++ SL +MY++
Sbjct: 175 KEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKR 234
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ + F E +++LW++MI+ Y +G GEEAI LF +M K + +T S +
Sbjct: 235 GLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAV 294
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
A + G E + D + K + T ++D+ +CG + A + + K +
Sbjct: 295 LASAQVGSLELA-RWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADK-D 352
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLS 282
++W ++ H A + E+ GV P D LL+
Sbjct: 353 VVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLT 396
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 120/253 (47%), Gaps = 4/253 (1%)
Query: 20 GSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVI 79
G + K R + +++ W +I G Q + + + Y M++ P+ TF+ V+
Sbjct: 33 GDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVL 92
Query: 80 SSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVV 139
+C + G G+QIH + K G +V V +SL+SMY++ G + + F + VV
Sbjct: 93 KACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVV 152
Query: 140 LWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLM 199
W+S+I+ Y +G EA+N+F++M Q + + + VS++ A ++ +G L+
Sbjct: 153 SWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLV 212
Query: 200 VK-KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTD 258
K +P + + + + G L E A N K N I+W ++S + +
Sbjct: 213 TKLGLEFEPDI--VISLTTMYAKRG-LVEVARFFFNRMEKPNLILWNAMISGYANNGYGE 269
Query: 259 MAGRIAEEILGVN 271
A ++ E++ N
Sbjct: 270 EAIKLFREMITKN 282
>gi|224122234|ref|XP_002318784.1| predicted protein [Populus trichocarpa]
gi|222859457|gb|EEE97004.1| predicted protein [Populus trichocarpa]
Length = 511
Score = 310 bits (794), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 168/443 (37%), Positives = 248/443 (55%), Gaps = 17/443 (3%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
+ +DLV + + M++ + + V M R+V+ W T+I G + E+ L +
Sbjct: 72 WSIDLVELNLIIDKLMRTENYRVAKMVFNKMRARDVVTWNTMIGGYVRKARFEEALRLFR 131
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M PDK TF SVI+ C++L L Q +H +++ L+ + S+LI MYS+CG
Sbjct: 132 FMNKSNVEPDKYTFASVINGCAKLGALKHAQWVHELLIEKRIELNFILSSALIDMYSKCG 191
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+ + + F + ++V +W++MI+ HG +AI +F +ME + + +TF+ +L
Sbjct: 192 KIQTAKEIFDGVQRNNVCIWNAMISGLAVHGLALDAIKVFTKMEVENVLPDAITFLGILT 251
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
ACSHCGL ++G ++FDLM +Y +P +EHY +VDLLGR G L+EA A+I++MP++ +
Sbjct: 252 ACSHCGLVKEGRKYFDLMRSRYSVQPHIEHYGAMVDLLGRAGLLEEAFAMIKSMPMEPDV 311
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
+IW+ LL AC+T+K ++ I + D YVLLSNI+ S KRW E M
Sbjct: 312 VIWRALLGACRTYKKPELGEAAMANISRLRSGD---YVLLSNIYCSQKRWDTAQGVWEMM 368
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
+++ V K G S E +H F GD+SHP + I LE L KL GYVP T
Sbjct: 369 KKKGVHKVRGKSCFEWAGFLHPFKAGDRSHPETEAIYKMLEGLIQRTKLAGYVPTTDLVT 428
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVMLP------------FKYISEIKNRE 407
D+ EEKE NL HHSEKLA+A+ + T G V + K +S + +R
Sbjct: 429 MDVSEEEKEGNLYHHSEKLALAYGILKTTSGAEVRISKNLRICYDCHSWIKIVSRLLSRV 488
Query: 408 IIVRDASRFHHFRNGKCSCGDYW 430
IIVRD RFH F NG CSCGDYW
Sbjct: 489 IIVRDRIRFHRFENGLCSCGDYW 511
>gi|449521367|ref|XP_004167701.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like, partial [Cucumis sativus]
Length = 390
Score = 310 bits (794), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 156/390 (40%), Positives = 238/390 (61%), Gaps = 14/390 (3%)
Query: 55 DVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLI 114
+ L+ ++ M + P++ T + +S + L+ L G Q+HA K+G +V V ++LI
Sbjct: 1 EALNLFSKMEIDCIPPNEYTMAVLFNSAAGLSALCLGDQLHARAEKSGLKGNVMVGNALI 60
Query: 115 SMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDV 174
MY + G + + F +++ W+++I + HG G+EA+++F+ M N V
Sbjct: 61 IMYFKSGDILAAQSVFSNMTCCNIITWNAIITGHSHHGLGKEALSMFQDMMATGERPNYV 120
Query: 175 TFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRN 234
TF+ ++ AC+H L ++G +F+ ++K++R P LEHYTC+V LL R G LDEA +R+
Sbjct: 121 TFIGVILACAHLKLVDEGFYYFNHLMKQFRIVPGLEHYTCIVGLLSRSGRLDEAENFMRS 180
Query: 235 MPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGV 294
+ + + W+TLL+AC HK D +IAE +L + P+D Y+LLSN+HA +RW V
Sbjct: 181 HQINWDVVSWRTLLNACYVHKHYDKGKKIAEYLLQLEPRDVGTYILLSNMHARVRRWDHV 240
Query: 295 SEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYV 354
E R+ MRERNVKKEPGVSWLEI+N H FT D HP + I +++L S+++ GYV
Sbjct: 241 VEIRKLMRERNVKKEPGVSWLEIRNVAHVFTSEDIKHPEANLIYENVKDLLSKIRPLGYV 300
Query: 355 PDTGADMHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVML------------PFKYI 400
PD +HD++ E+K NL +HSEKLA+A+ + G + + K I
Sbjct: 301 PDIDNVLHDIEDEQKVDNLSYHSEKLAVAYGLMKTPSGAPIRVIKNLRMCDDCHTAIKLI 360
Query: 401 SEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
S++ NR I+VRDA+RFHHF+NG CSCGDYW
Sbjct: 361 SKVANRVIVVRDANRFHHFQNGYCSCGDYW 390
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 89/174 (51%), Gaps = 7/174 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + +++ G++L MY KSG ++ + V M N+I W +I G + +GL ++ L +
Sbjct: 48 GLKGNVMVGNALIIMYFKSGDILAAQSVFSNMTCCNIITWNAIITGHSHHGLGKEALSMF 107
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLD-VGVISSLISMYSR 119
M G RP+ +TF+ VI +C+ L + +G ++K + + + ++ + SR
Sbjct: 108 QDMMATGERPNYVTFIGVILACAHLKLVDEGFYYFNHLMKQFRIVPGLEHYTCIVGLLSR 167
Query: 120 CGCLDDSVKTFLECEYS--DVVLWSSMIAAYGFH---GKGEEAINLFEQMEQKE 168
G LD++ + F+ DVV W +++ A H KG++ Q+E ++
Sbjct: 168 SGRLDEA-ENFMRSHQINWDVVSWRTLLNACYVHKHYDKGKKIAEYLLQLEPRD 220
>gi|359495599|ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 168/445 (37%), Positives = 260/445 (58%), Gaps = 24/445 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+VA + + Y G + E V + ++ + W +I G +N L+ + M+
Sbjct: 211 DVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEETNRALEAFRGMQ 270
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
RP++ T V V+S+CS+L L G+ +H+ + K L++ V ++LI+MYSRCG +D
Sbjct: 271 GENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSID 330
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
++ F E + DV+ +++MI+ +GK +AI LF M + +VTFV +L ACS
Sbjct: 331 EAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACS 390
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H GL + G E F M + YR +P++EHY C+VDLLGR G L+EA LIR M + + I+
Sbjct: 391 HGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIML 450
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
TLLSACK HK+ ++ ++A+E+ D+ YVLLS+++AS+ +W+ ++ R M+E
Sbjct: 451 GTLLSACKMHKNLELGEQVAKELEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEA 510
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
++KEPG S +E+ N++H+F +GD HP+ I LEEL ++L GY P+ + D+
Sbjct: 511 GMQKEPGCSSIEVNNEIHEFLLGDLRHPQKERIYEKLEELNRLLRLEGYHPEKEVVLQDI 570
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKN 405
+ EKE+ L HSE+LAI + GLI P K I++I
Sbjct: 571 EDGEKEWALAMHSERLAICY-----GLISTEPCTMIRVMKNLRVCYDCHSAIKLIAKITR 625
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
R+I+VRD +RFH+F NG CSCGDYW
Sbjct: 626 RKIVVRDRNRFHYFENGACSCGDYW 650
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 111/264 (42%), Gaps = 32/264 (12%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
NV + LI G +G + + Y+ M PD S++ +C L +G+++H
Sbjct: 111 NVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVH 170
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLE------------CEYS------- 136
+ +K G S + V ++ +Y +CG L D+ + F E YS
Sbjct: 171 SRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVASTVMISSYSDQGLVEE 230
Query: 137 -----------DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSH 185
D V W++MI + + + A+ F M+ + N+ T V +L ACS
Sbjct: 231 AGAVFSRVRRKDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQ 290
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
G E G M +K+ + L ++++ RCG +DEA + M + + I +
Sbjct: 291 LGALEIGRWVHSYM-RKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDR-DVITYN 348
Query: 246 TLLSACKTHKSTDMAGRIAEEILG 269
T++S + + A + ++G
Sbjct: 349 TMISGLSMNGKSRQAIELFRVMVG 372
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 101/206 (49%), Gaps = 14/206 (6%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
EL+L G++L +MY + GS+ E + V M R+VI + T+I+G + NG + ++ +
Sbjct: 309 IELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFR 368
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQI-HAEVVKAGASLDVGVISSLISMYSRC 120
+M RP +TFV V+++CS + G +I H+ + ++ + R
Sbjct: 369 VMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRV 428
Query: 121 GCLDDSVKTFLECEYS-DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G L+++ + + D ++ ++++A H E + +++E + +A+ T+V L
Sbjct: 429 GRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKELEDRG-QADSGTYVLL 487
Query: 180 --LYACS---------HCGLKEKGME 194
+YA S +KE GM+
Sbjct: 488 SHVYASSGKWKEAAQVRAKMKEAGMQ 513
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 3/160 (1%)
Query: 78 VISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSD 137
+IS + Q IHA++++ G S D ++ L+ S+C +D + + F +
Sbjct: 52 IISLLQRSRHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPN 111
Query: 138 VVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC-SHCGLKEKGMEFF 196
V L++++I + G EAI L+ +M + ++ S+L AC S L+E G E
Sbjct: 112 VYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALRE-GREVH 170
Query: 197 DLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
+K RL +++L G+CG L +A + MP
Sbjct: 171 SRALKLGFSSNRLVRLR-IMELYGKCGELGDARRVFEEMP 209
>gi|302824741|ref|XP_002994011.1| hypothetical protein SELMODRAFT_137997 [Selaginella moellendorffii]
gi|300138173|gb|EFJ04951.1| hypothetical protein SELMODRAFT_137997 [Selaginella moellendorffii]
Length = 434
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 170/435 (39%), Positives = 245/435 (56%), Gaps = 25/435 (5%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y + G ++ + P RN +W +IAG AQNG + L + M G R D +TF
Sbjct: 5 YARHGRMIHAKTTFDAAPRRNSSSWNAMIAGYAQNGHCKAALHLFRAMNNEGQRCDMVTF 64
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
V+ I +C+ L+ L G+ +H+ AG V + +++++MY++CG LDD+ F
Sbjct: 65 VAAIDACAGLSALVAGRSLHSIAAAAGLVAHVEISTAIVNMYAKCGNLDDATIVFSSIRN 124
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
+++ WS+MI A+ +G + A++ F M + VTF S+L ACSH GL E G
Sbjct: 125 KNLISWSTMITAFVQNGHTDRALDAFLAMNVDGLFPDAVTFKSILSACSHAGLFEHGFFH 184
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK 255
FDL+V + P ++H+ C+VDLLGR G L EA L++ MP + + W TLL+AC+ HK
Sbjct: 185 FDLLVHDFGITPTMDHFKCMVDLLGRSGRLLEAEELVQTMPFVPDDVTWNTLLAACRVHK 244
Query: 256 STDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWL 315
S + R AE +L + + YVLLSNIHA+A ++ R+ M R V+K+PG S +
Sbjct: 245 SVERGKRAAEVLLELTSEIPGYYVLLSNIHAAAGDHAEKAKVRDLMEARGVRKKPGWSTI 304
Query: 316 EIKNQVHQFTMGDK-SHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLK 374
EI ++ H+FT G+K HP+ +I L+ L+ MK GYVPDT + ++ +EKE L
Sbjct: 305 EINDRFHEFTAGEKFQHPKKQQILEELKRLSVLMKEDGYVPDTTEVLRLVNEDEKESLLF 364
Query: 375 HHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREIIVRDASR 415
HSEKLAIA GLI P K+IS+I R+IIVRD +R
Sbjct: 365 FHSEKLAIAC-----GLISTPPGTTLRVVKNLRVCSDCHSATKFISKITGRKIIVRDLNR 419
Query: 416 FHHFRNGKCSCGDYW 430
FHH NG CSCGDYW
Sbjct: 420 FHHTENGVCSCGDYW 434
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 72/145 (49%), Gaps = 4/145 (2%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
+++ +MY K G+L + V + +N+I+W T+I QNG + LD + M + G
Sbjct: 100 TAIVNMYAKCGNLDDATIVFSSIRNKNLISWSTMITAFVQNGHTDRALDAFLAMNVDGLF 159
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVV--KAGASLDVGVISSLISMYSRCGCLDDSV 127
PD +TF S++S+CS G H +++ G + + ++ + R G L ++
Sbjct: 160 PDAVTFKSILSACSHAGLFEHG-FFHFDLLVHDFGITPTMDHFKCMVDLLGRSGRLLEAE 218
Query: 128 KTFLECEY-SDVVLWSSMIAAYGFH 151
+ + D V W++++AA H
Sbjct: 219 ELVQTMPFVPDDVTWNTLLAACRVH 243
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 80/168 (47%), Gaps = 5/168 (2%)
Query: 113 LISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEAN 172
+I+ Y+R G + + TF + W++MIA Y +G + A++LF M + +
Sbjct: 1 MIAAYARHGRMIHAKTTFDAAPRRNSSSWNAMIAGYAQNGHCKAALHLFRAMNNEGQRCD 60
Query: 173 DVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALI 232
VTFV+ + AC+ G + +E T +V++ +CG LD+A +
Sbjct: 61 MVTFVAAIDACAGLSALVAGRSLHSIAAAA-GLVAHVEISTAIVNMYAKCGNLDDATIVF 119
Query: 233 RNMPVKANAIIWKTLLSACKTHKSTDMA--GRIAEEILGVNPQDAAPY 278
++ K N I W T+++A + TD A +A + G+ P DA +
Sbjct: 120 SSIRNK-NLISWSTMITAFVQNGHTDRALDAFLAMNVDGLFP-DAVTF 165
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 160/448 (35%), Positives = 249/448 (55%), Gaps = 46/448 (10%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E +L ++L MY K GS+ V M ++++I+W T+I
Sbjct: 384 ESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGE---------------- 427
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
+PD T V+ +C+ L+ L +G++IH +++ G S D V ++L+ +Y +CG
Sbjct: 428 -----LKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGV 482
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
L + F D+V W+ MIA YG HG G EAI F +M E ++V+F+S+LYA
Sbjct: 483 LGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYA 542
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
CSH GL E+G FF +M + +P+LEHY C+VDLL R G L +A + +P+ +A
Sbjct: 543 CSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDAT 602
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMR 302
IW LL C+ + ++A ++AE + + P++ YVLL+NI+A A++W+ V RE +
Sbjct: 603 IWGALLCGCRNYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRLREKIG 662
Query: 303 ERNVKKEPGVSWLEIKNQVHQFTMGDK-SHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
++ ++K PG SW+EIK +V+ F G+ SHP S I+ L+++ +MK G+ P T +
Sbjct: 663 KQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHFPKTKYAL 722
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPFKYISEIKN---------------- 405
+ D +KE L HSEKLA+AF GL+ + P K I KN
Sbjct: 723 INADEMQKEMALCGHSEKLAMAF-----GLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSK 777
Query: 406 ---REIIVRDASRFHHFRNGKCSCGDYW 430
REI++RD++RFHHF++G CSC +W
Sbjct: 778 ETRREIVLRDSNRFHHFKDGYCSCRGFW 805
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 120/223 (53%), Gaps = 2/223 (0%)
Query: 35 RNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQI 94
R+VI+W ++I+G NGL E L Y M +G D T +SV+ C+ TL G+ +
Sbjct: 214 RDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAV 273
Query: 95 HAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKG 154
H+ +K+ + ++L+ MYS+CG LD +++ F + +VV W+SMIA Y G+
Sbjct: 274 HSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRS 333
Query: 155 EEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC 214
+ AI L +QME++ + + V S+L+AC+ G + G + D +K + L
Sbjct: 334 DGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDY-IKANNMESNLFVCNA 392
Query: 215 VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKST 257
++D+ +CG ++ A ++ M VK + I W T++ K T
Sbjct: 393 LMDMYAKCGSMEAANSVFSTMVVK-DIISWNTMIGELKPDSRT 434
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 125/294 (42%), Gaps = 25/294 (8%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
FE + ++L MY K G L +V M RNV++W ++IAG ++G ++ +
Sbjct: 282 FERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQ 341
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M G + D + S++ +C+ +L G+ +H + ++ V ++L+ MY++CG
Sbjct: 342 QMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCG 401
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
++ + F D++ W++MI E + + T +L
Sbjct: 402 SMEAANSVFSTMVVKDIISWNTMIG---------------------ELKPDSRTMACVLP 440
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
AC+ E+G E +++ R +VDL +CG L A L +P K +
Sbjct: 441 ACASLSALERGKEIHGYILRNGYSSDR-HVANALVDLYVKCGVLGLARLLFDMIPSK-DL 498
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLSNIHASAKRWQG 293
+ W +++ H + A E+ G+ P + + +L S QG
Sbjct: 499 VSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQG 552
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 88/174 (50%), Gaps = 10/174 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ D ++L +Y+K G L + ++P +++++W +IAG +G + + +
Sbjct: 462 GYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATF 521
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV--ISSLISMYS 118
N MR G PD+++F+S++ +CS L QG + ++K +++ + + ++ + S
Sbjct: 522 NEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFY-IMKNDFNIEPKLEHYACMVDLLS 580
Query: 119 RCGCLDDSVKTFLECE--YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFE 170
R G L + + F+E D +W +++ + I L E++ ++ FE
Sbjct: 581 RTGNLSKAYE-FMETLPIAPDATIWGALLCGC----RNYHDIELAEKVAERVFE 629
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 99/245 (40%), Gaps = 53/245 (21%)
Query: 74 TFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK----- 128
T+ SV+ C+ L + G+++H+ + +D + L+S Y+ CG L + +
Sbjct: 101 TYGSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTM 160
Query: 129 --------TFLECEYS--------------------------------------DVVLWS 142
F+ EY+ DV+ W+
Sbjct: 161 EKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWN 220
Query: 143 SMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKK 202
SMI+ Y +G E + +++QM + + T +S+L C++ G G L +K
Sbjct: 221 SMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKS 280
Query: 203 YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGR 262
+ R+ ++D+ +CG LD A + M + N + W ++++ +D A +
Sbjct: 281 SFER-RINFSNTLLDMYSKCGDLDGALRVFEKMGER-NVVSWTSMIAGYTRDGRSDGAIK 338
Query: 263 IAEEI 267
+ +++
Sbjct: 339 LLQQM 343
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 164/449 (36%), Positives = 259/449 (57%), Gaps = 25/449 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E ++ ++L MY K +V + + ++W +I G QNG +ED + +
Sbjct: 458 GLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLF 517
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M++ +PD T VS+I + ++++ Q + IH ++ DV V+++LI MY++C
Sbjct: 518 SRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKC 577
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + F V+ W++MI YG HG G+ A+ LFE+M+ N+ TF+S+L
Sbjct: 578 GRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVL 637
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL ++G E+F M + Y +P +EHY +VDLLGR G L EA + I+ MP++
Sbjct: 638 SACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPG 697
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
++ +L ACK HK+ ++A A+ I + P++ +VLL+NI+A+A W+ V+ R A
Sbjct: 698 ISVYGAMLGACKLHKNVELAEESAQRIFELEPEEGVYHVLLANIYANASLWKDVARVRTA 757
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M ++ ++K PG S +++KN++H F G +H ++ +I L +L E+K GYVPDT +
Sbjct: 758 MEKKGLQKTPGWSIVQLKNEIHTFYSGSTNHQQAKDIYARLAKLIEEIKAVGYVPDTDS- 816
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYIS 401
+HD++ + K L HSEKLAIA+ GLI P K IS
Sbjct: 817 IHDVEDDVKAQLLNTHSEKLAIAY-----GLIRTAPGTTIQIKKNLRVCKDCHNATKLIS 871
Query: 402 EIKNREIIVRDASRFHHFRNGKCSCGDYW 430
+ REII+RD RFHHF++GKCSCGDYW
Sbjct: 872 LVTGREIIMRDIQRFHHFKDGKCSCGDYW 900
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 142/266 (53%), Gaps = 7/266 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + +A ++LA+MY K + +V MP R+ +AW L+AG A+NGLAE +
Sbjct: 255 GLSPEALAATALANMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGM- 313
Query: 61 NLMRMV---GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMY 117
++RM G RPD +T VSV+ +C++ LG +++HA V+ G V V ++++ +Y
Sbjct: 314 -VVRMQEEDGERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVY 372
Query: 118 SRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
+CG +D + K F + + V W++MI Y +G EA+ LF++M + + DV+ +
Sbjct: 373 CKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVL 432
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
+ L+AC G ++G +L+V + + + ++ + +C D AA + +
Sbjct: 433 AALHACGELGFLDEGRRVHELLV-RIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGY 491
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRI 263
K + W ++ C + S++ A R+
Sbjct: 492 KTR-VSWNAMILGCTQNGSSEDAVRL 516
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 153/318 (48%), Gaps = 14/318 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ + +++ +Y K G++ KV M RN ++W +I G A+NG A + L +
Sbjct: 357 GFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALF 416
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G ++ ++ + +C EL L +G+++H +V+ G +V V+++LI+MY +C
Sbjct: 417 KRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMYCKC 476
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
D + + F E Y V W++MI +G E+A+ LF +M+ + + + T VS++
Sbjct: 477 KRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSII 536
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEH----YTCVVDLLGRCGYLDEAAALIRNMP 236
A L + + Y + L+ T ++D+ +CG + A +L N
Sbjct: 537 PA-----LADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLF-NSA 590
Query: 237 VKANAIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLSNIHASAKRWQGV 294
+ I W ++ +H S +A + EE+ G P + +LS + +G
Sbjct: 591 RDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEG- 649
Query: 295 SEFREAMRERNVKKEPGV 312
E+ +M+E + EPG+
Sbjct: 650 QEYFSSMKE-DYGLEPGM 666
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 92/183 (50%), Gaps = 3/183 (1%)
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
G P TF S++ C+ A L G+ +HA++ G S + ++L +MY++C D+
Sbjct: 220 GSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDA 279
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEAND-VTFVSLLYACSH 185
+ F D V W++++A Y +G E A+ + +M++++ E D VT VS+L AC+
Sbjct: 280 RRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACAD 339
Query: 186 CGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWK 245
E V+ + ++ T ++D+ +CG +D A + M + N++ W
Sbjct: 340 AQALGACREVHAFAVRGGFDE-QVNVSTAILDVYCKCGAVDSARKVFDGMQDR-NSVSWN 397
Query: 246 TLL 248
++
Sbjct: 398 AMI 400
>gi|356522333|ref|XP_003529801.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 650
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 160/438 (36%), Positives = 248/438 (56%), Gaps = 18/438 (4%)
Query: 7 VAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV 66
+ G + HM+ G + E + V M R+V++W +I G + L + M+M
Sbjct: 217 INGGIVEHMFAACGEMDEAQGVFDNMKTRDVVSWTAMIDGYLRMNHFIGALALFREMQMS 276
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
+PD+ T VS++ +C+ L L G+ + + K D V ++L+ MY +CG + +
Sbjct: 277 NVKPDEFTMVSILIACALLGALELGEWVKTCIDKNSNKNDSFVGNALVDMYFKCGNVRKA 336
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHC 186
K F E D W++MI +G GEEA+ +F M + +++T++ +L AC
Sbjct: 337 KKVFKEMYQKDKFTWTTMIVGLAINGHGEEALAMFSNMIEASVTPDEITYIGVLCAC--- 393
Query: 187 GLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKT 246
+ +KG FF M ++ KP + HY C+VDLLG G L+EA +I NMPVK N+I+W +
Sbjct: 394 -MVDKGKSFFTNMTMQHGIKPTVTHYGCMVDLLGCVGCLEEALEVIVNMPVKPNSIVWGS 452
Query: 247 LLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNV 306
L AC+ HK+ +A A++IL + P++ A YVLL NI+A++K+W+ + + R+ M ER +
Sbjct: 453 PLGACRVHKNVQLADMAAKQILELEPENGAVYVLLCNIYAASKKWENLCQVRKLMMERGI 512
Query: 307 KKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDS 366
KK PG S +E+ V++F GD+SHP+S EI LE + + GY PDT D+
Sbjct: 513 KKTPGCSLMELNGNVYEFVAGDQSHPQSKEIYAKLENMMQGLIKAGYSPDTSEVFLDLGE 572
Query: 367 EEKEYNLKHHSEKLAIAFAEHTRGLIVMLPF--------------KYISEIKNREIIVRD 412
E+KE L HSEKLAIA+A + G V + K +S+ NRE+IV+D
Sbjct: 573 EDKETALYRHSEKLAIAYALISSGPGVTIRIVKNLRMCVDCHHMAKLVSQAYNRELIVKD 632
Query: 413 ASRFHHFRNGKCSCGDYW 430
+RFHHFR+G CSC ++W
Sbjct: 633 KTRFHHFRHGSCSCNNFW 650
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 100/231 (43%), Gaps = 29/231 (12%)
Query: 18 KSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVS 77
+SG++ +V +P ++ W T+I G ++ E+ + Y LM +PD+ TF
Sbjct: 53 ESGNMNYAHQVFDTIPHPSMFIWNTMIKGYSKISHPENGVSMYLLMLTSNIKPDRFTFPF 112
Query: 78 VISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSD 137
+ + L G+++ VK G ++ V + I M+S CG +D + K F + +
Sbjct: 113 SLKGFTRDMALQHGKELLNHAVKHGFDSNLFVQKAFIHMFSLCGIVDLAHKVFDMGDACE 172
Query: 138 VVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFD 197
VV W+ M++ Y K+F+ + + V L ACS E G F
Sbjct: 173 VVTWNIMLSGYN---------------RVKQFKISKMLLV--LSACSKLKDLEWGKHIF- 214
Query: 198 LMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
KY +EH + CG +DEA + NM + + + W ++
Sbjct: 215 ----KYINGGIVEH------MFAACGEMDEAQGVFDNMKTR-DVVSWTAMI 254
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 111/248 (44%), Gaps = 29/248 (11%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ +L + HM+ G + KV + V+ W +++G Y
Sbjct: 137 GFDSNLFVQKAFIHMFSLCGIVDLAHKVFDMGDACEVVTWNIMLSG-------------Y 183
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
N R+ F+ K+ V+S+CS+L L G+ I + + G++ M++ C
Sbjct: 184 N--RVKQFKISKMLL--VLSACSKLKDLEWGKHIFKYI-------NGGIVE---HMFAAC 229
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +D++ F + DVV W++MI Y A+ LF +M+ + ++ T VS+L
Sbjct: 230 GEMDEAQGVFDNMKTRDVVSWTAMIDGYLRMNHFIGALALFREMQMSNVKPDEFTMVSIL 289
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+ G E G E+ + K K +VD+ +CG + +A + + M K +
Sbjct: 290 IACALLGALELG-EWVKTCIDKNSNKNDSFVGNALVDMYFKCGNVRKAKKVFKEMYQK-D 347
Query: 241 AIIWKTLL 248
W T++
Sbjct: 348 KFTWTTMI 355
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 89/184 (48%), Gaps = 9/184 (4%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D G++L MY K G++ + +KV + M ++ W T+I G A NG E+ L ++ M
Sbjct: 316 DSFVGNALVDMYFKCGNVRKAKKVFKEMYQKDKFTWTTMIVGLAINGHGEEALAMFSNMI 375
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEV-VKAGASLDVGVISSLISMYSRCGCL 123
PD+IT++ V+ +C + +G+ + ++ G V ++ + GCL
Sbjct: 376 EASVTPDEITYIGVLCAC----MVDKGKSFFTNMTMQHGIKPTVTHYGCMVDLLGCVGCL 431
Query: 124 DDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL--L 180
+++++ + + ++W S + A H + A +Q+ + E E N +V L +
Sbjct: 432 EEALEVIVNMPVKPNSIVWGSPLGACRVHKNVQLADMAAKQILELEPE-NGAVYVLLCNI 490
Query: 181 YACS 184
YA S
Sbjct: 491 YAAS 494
>gi|326522230|dbj|BAK04243.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 156/446 (34%), Positives = 257/446 (57%), Gaps = 26/446 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+V +++ G + ++ MP R+ +AW ++ G + G + + L ++ M+
Sbjct: 189 DVVCVTAMLGALSAGGDVDTARELFDGMPQRDHVAWNAMLTGYVRVGRSREALGLFDEMQ 248
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G ++T VSV+++C+++ L +G +H+ V G + V + ++L+ MYS+CG +
Sbjct: 249 KAGVAVSEVTLVSVLTACAQMGALERGMWVHSYVCSRGMRVSVTLGTALVDMYSKCGVVT 308
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
S++ F ++ W+S ++ +G GEE + LF++ME E N VTFV++L CS
Sbjct: 309 MSMEVFETMRERNIYTWTSALSGLAMNGMGEECLELFKRMESAGMEPNGVTFVAVLRGCS 368
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
GL E+G FD M K++ +P LEHY C+VDL GR G LD+A I +MPV+ + +W
Sbjct: 369 VAGLVEEGRACFDSMKDKHKVEPWLEHYGCMVDLYGRAGRLDDAVDFINSMPVEPHEGVW 428
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
LL+A + H + D+ ++ + ++ A +VLLSNI+A + W+GVS+ R M+ +
Sbjct: 429 GALLNASRIHNNVDLGKHAMHKLTEIESKNDAAHVLLSNIYAESHNWKGVSKVRNMMKSK 488
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
VKK PG S +E+ +VH+F +G KSHPR +I L E++ ++L+GY +T + D+
Sbjct: 489 GVKKMPGCSAIEVDGKVHEFFVGSKSHPRYKDIQTMLAEMSHRLRLQGYAANTKEVLFDI 548
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP--------------------FKYISEIK 404
+ EEKE + HSEKLA+AF ++ LP K IS++
Sbjct: 549 EEEEKEGAISLHSEKLALAFG------LITLPEDTVIRIVKNLRVCKDCHDYTKLISKVF 602
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
+REI++RD +RFHHF++G CSC DYW
Sbjct: 603 DREIVMRDRNRFHHFKHGACSCRDYW 628
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 94/192 (48%), Gaps = 11/192 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + + G++L MY K G + +V M RN+ W + ++G A NG+ E+ L+ +
Sbjct: 286 GMRVSVTLGTALVDMYSKCGVVTMSMEVFETMRERNIYTWTSALSGLAMNGMGEECLELF 345
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV--ISSLISMYS 118
M G P+ +TFV+V+ CS + +G+ + +K ++ + ++ +Y
Sbjct: 346 KRMESAGMEPNGVTFVAVLRGCSVAGLVEEGRACF-DSMKDKHKVEPWLEHYGCMVDLYG 404
Query: 119 RCGCLDDSVKTF--LECEYSDVVLWSSMIAAYGFHGK---GEEAINLFEQMEQKEFEAND 173
R G LDD+V + E + V W +++ A H G+ A++ ++E K A+
Sbjct: 405 RAGRLDDAVDFINSMPVEPHEGV-WGALLNASRIHNNVDLGKHAMHKLTEIESKNDAAH- 462
Query: 174 VTFVSLLYACSH 185
+S +YA SH
Sbjct: 463 -VLLSNIYAESH 473
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 84/172 (48%), Gaps = 6/172 (3%)
Query: 79 ISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDV 138
+S + + +G + AE+V S DV +++++ S G +D + + F D
Sbjct: 166 VSMYAAVGDVGAVRAAFAEIV----SPDVVCVTAMLGALSAGGDVDTARELFDGMPQRDH 221
Query: 139 VLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDL 198
V W++M+ Y G+ EA+ LF++M++ ++VT VS+L AC+ G E+GM
Sbjct: 222 VAWNAMLTGYVRVGRSREALGLFDEMQKAGVAVSEVTLVSVLTACAQMGALERGMWVHSY 281
Query: 199 MVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
+ + R + T +VD+ +CG + + + M + N W + LS
Sbjct: 282 VCSRGMRV-SVTLGTALVDMYSKCGVVTMSMEVFETMRER-NIYTWTSALSG 331
>gi|326515658|dbj|BAK07075.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 796
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 161/443 (36%), Positives = 254/443 (57%), Gaps = 15/443 (3%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F+ D GS+L +Y+ SG + +G + +P ++V+ W +I+G QN L E L ++
Sbjct: 355 FQGDDFIGSALIDLYLNSGCMEDGFRCFTSVPKQDVVTWTAMISGCVQNELFERALTLFH 414
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
+ G +PD T SV+++C+ LA G+QI K+G + +S I MY+R G
Sbjct: 415 ELLGAGLKPDPFTISSVMNACASLAVARTGEQIQCFATKSGFGRFTAMGNSCIHMYARSG 474
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+ +V+ F E E D+V WS++I+++ HG +A+ F +M + N++TF+ +L
Sbjct: 475 DVHAAVRRFQEMESHDIVSWSAVISSHAQHGCARDALRFFNEMVDAKVVPNEITFLGVLT 534
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
ACSH GL ++G+++++ M ++Y P ++H TCVVDLLGR G L +A A IR+
Sbjct: 535 ACSHGGLVDEGLKYYETMKEEYALSPTIKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEP 594
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
+IW++LL++C+ H+ + +A+ I+ + P +A YV L NI+ A S+ R+ M
Sbjct: 595 VIWRSLLASCRIHRDMERGQLVADRIMELQPSSSASYVNLYNIYLDAGELSLASKIRDVM 654
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
+ER VKKEPG+SW+E+++ VH F GDKSHP S I L E+ S++ +
Sbjct: 655 KERGVKKEPGLSWIELRSGVHSFVAGDKSHPESNAIYSKLAEMLSKIDKLTATDASSTKS 714
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFA----EHTRGLIVM----------LPFKYISEIKNRE 407
D E+ + + HSEKLA+A + + VM L K IS+ + RE
Sbjct: 715 DDTIRNEQSW-MNWHSEKLAVALGLIHLPQSAPIRVMKNLRVCRDCHLTMKLISKSEKRE 773
Query: 408 IIVRDASRFHHFRNGKCSCGDYW 430
I++RDA RFHHFR+G CSC DYW
Sbjct: 774 IVLRDAIRFHHFRDGSCSCADYW 796
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 135/279 (48%), Gaps = 18/279 (6%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAG--KAQNGLAEDVLD 58
GF+ D+ S++ MY K G+L E + + + NV+ + +IAG + + + DVL
Sbjct: 247 GFDSDVFLASAMVGMYAKKGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLR 306
Query: 59 Q----YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLI 114
+ Y+ ++ G P + TF SVI +C+ + G+QIH +V+K D + S+LI
Sbjct: 307 EALSLYSEVQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALI 366
Query: 115 SMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDV 174
+Y GC++D + F DVV W++MI+ + E A+ LF ++ + +
Sbjct: 367 DLYLNSGCMEDGFRCFTSVPKQDVVTWTAMISGCVQNELFERALTLFHELLGAGLKPDPF 426
Query: 175 TFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV----VDLLGRCGYLDEAAA 230
T S++ AC+ + G + ++ + K +T + + + R G D AA
Sbjct: 427 TISSVMNACASLAVARTGEQ-----IQCFATKSGFGRFTAMGNSCIHMYARSG--DVHAA 479
Query: 231 LIRNMPVKANAII-WKTLLSACKTHKSTDMAGRIAEEIL 268
+ R ++++ I+ W ++S+ H A R E++
Sbjct: 480 VRRFQEMESHDIVSWSAVISSHAQHGCARDALRFFNEMV 518
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 112/229 (48%), Gaps = 7/229 (3%)
Query: 25 GEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY-NLMRMVGFRPDKITFVSVISSCS 83
+++ MP N +++ LI ++ G E L+ + R G R D+ T+ + +++CS
Sbjct: 66 ARRLLDEMPRTNAVSFNLLIDAYSRAGQPEASLETFARARRSAGVRADRFTYAAALAACS 125
Query: 84 ELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSS 143
L +G+ +HA V G + V V +SL+SMY+RCG + + + F + D V W++
Sbjct: 126 RAGRLREGKAVHALSVLEGIAGGVFVSNSLVSMYARCGDMGQARQVFDAADERDDVSWNA 185
Query: 144 MIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLM---V 200
+++ Y G ++ + +F M + N S++ C+ G + M+ + V
Sbjct: 186 LVSGYVRAGAQDDMLRVFAMMRRSGIGLNSFALGSVIKCCA--GSDDPVMDIAAAVHGCV 243
Query: 201 KKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
K + + +V + + G L EA AL +++ + N +++ +++
Sbjct: 244 VKAGFDSDVFLASAMVGMYAKKGALSEAVALFKSV-LDPNVVVFNAMIA 291
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 78/154 (50%), Gaps = 4/154 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF G+S HMY +SG + + + M ++++W +I+ AQ+G A D L +
Sbjct: 455 GFGRFTAMGNSCIHMYARSGDVHAAVRRFQEMESHDIVSWSAVISSHAQHGCARDALRFF 514
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV--ISSLISMYS 118
N M P++ITF+ V+++CS + +G + + E +K +L + + ++ +
Sbjct: 515 NEMVDAKVVPNEITFLGVLTACSHGGLVDEGLKYY-ETMKEEYALSPTIKHCTCVVDLLG 573
Query: 119 RCGCLDDSVKTFLECEYSD-VVLWSSMIAAYGFH 151
R G L D+ + + D V+W S++A+ H
Sbjct: 574 RAGRLADAEAFIRDSIFHDEPVIWRSLLASCRIH 607
>gi|356545004|ref|XP_003540936.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Glycine max]
Length = 629
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 169/442 (38%), Positives = 248/442 (56%), Gaps = 14/442 (3%)
Query: 3 ELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNL 62
E D+VA + + G + E +V M R+ + W +I G +NG L+ +
Sbjct: 188 ERDVVACTVMIGSCFDCGMVEEAIEVFNEMGTRDTVCWTMVIDGLVRNGEFNRGLEVFRE 247
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
M++ G P+++TFV V+S+C++L L G+ IHA + K G ++ V +LI+MYSRCG
Sbjct: 248 MQVKGVEPNEVTFVCVLSACAQLGALELGRWIHAYMRKCGVEVNRFVAGALINMYSRCGD 307
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
+D++ F DV ++SMI HGK EA+ LF +M ++ N +TFV +L A
Sbjct: 308 IDEAQALFDGVRVKDVSTYNSMIGGLALHGKSIEAVELFSEMLKERVRPNGITFVGVLNA 367
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
CSH GL + G E F+ M + +P +EHY C+VD+LGR G L+EA I M V+A+
Sbjct: 368 CSHGGLVDLGGEIFESMEMIHGIEPEVEHYGCMVDILGRVGRLEEAFDFIGRMGVEADDK 427
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMR 302
+ +LLSACK HK+ M ++A+ + D+ +++LSN +AS RW +E RE M
Sbjct: 428 MLCSLLSACKIHKNIGMGEKVAKLLSEHYRIDSGSFIMLSNFYASLGRWSYAAEVREKME 487
Query: 303 ERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMH 362
+ + KEPG S +E+ N +H+F GD HP I LEEL K GY+P T +H
Sbjct: 488 KGGIIKEPGCSSIEVNNAIHEFFSGDLRHPERKRIYKKLEELNYLTKFEGYLPATEVALH 547
Query: 363 DMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP--------------FKYISEIKNREI 408
D+D E+KE L HSE+LAI + + L K I++I R+I
Sbjct: 548 DIDDEQKELALAVHSERLAICYGLVSTEAYTTLRVGKNLRICDDCHAMIKLIAKITRRKI 607
Query: 409 IVRDASRFHHFRNGKCSCGDYW 430
+VRD +RFHHF NG+CSC DYW
Sbjct: 608 VVRDRNRFHHFENGECSCKDYW 629
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 123/299 (41%), Gaps = 41/299 (13%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D L +Y K + K+ R NV + +LI G G D ++ + M
Sbjct: 58 DPFVAFELLRVYCKVNYIDHAIKLFRCTQNPNVYLYTSLIDGFVSFGSYTDAINLFCQMV 117
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
D +++ +C LG G+++H V+K+G LD + L+ +Y +CG L+
Sbjct: 118 RKHVLADNYAVTAMLKACVLQRALGSGKEVHGLVLKSGLGLDRSIALKLVELYGKCGVLE 177
Query: 125 D-------------------------------SVKTFLECEYSDVVLWSSMIAAYGFHGK 153
D +++ F E D V W+ +I +G+
Sbjct: 178 DARKMFDGMPERDVVACTVMIGSCFDCGMVEEAIEVFNEMGTRDTVCWTMVIDGLVRNGE 237
Query: 154 GEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYT 213
+ +F +M+ K E N+VTFV +L AC+ G E G + Y RK +E
Sbjct: 238 FNRGLEVFREMQVKGVEPNEVTFVCVLSACAQLGALELGR-----WIHAYMRKCGVEVNR 292
Query: 214 CV----VDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL 268
V +++ RCG +DEA AL + VK + + +++ H + A + E+L
Sbjct: 293 FVAGALINMYSRCGDIDEAQALFDGVRVK-DVSTYNSMIGGLALHGKSIEAVELFSEML 350
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 79/163 (48%), Gaps = 8/163 (4%)
Query: 92 QQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFH 151
Q IH +K S D V L+ +Y + +D ++K F + +V L++S+I +
Sbjct: 44 QSIHCHAIKTRTSQDPFVAFELLRVYCKVNYIDHAIKLFRCTQNPNVYLYTSLIDGFVSF 103
Query: 152 GKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKK---YRRKPR 208
G +AINLF QM +K A++ ++L AC G E L++K R
Sbjct: 104 GSYTDAINLFCQMVRKHVLADNYAVTAMLKACVLQRALGSGKEVHGLVLKSGLGLDRSIA 163
Query: 209 LEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSAC 251
L+ +V+L G+CG L++A + MP + + + ++ +C
Sbjct: 164 LK----LVELYGKCGVLEDARKMFDGMPER-DVVACTVMIGSC 201
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 89/188 (47%), Gaps = 9/188 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E++ +L +MY + G + E + + + +++V + ++I G A +G + + ++ +
Sbjct: 287 GVEVNRFVAGALINMYSRCGDIDEAQALFDGVRVKDVSTYNSMIGGLALHGKSIEAVELF 346
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEV-VKAGASLDVGVISSLISMYSR 119
+ M RP+ ITFV V+++CS + G +I + + G +V ++ + R
Sbjct: 347 SEMLKERVRPNGITFVGVLNACSHGGLVDLGGEIFESMEMIHGIEPEVEHYGCMVDILGR 406
Query: 120 CGCLDDSVKTF--LECEYSDVVLWSSMIAAYGFH---GKGEEAINLFEQMEQKEFEANDV 174
G L+++ + E D +L S+++A H G GE+ L E ++
Sbjct: 407 VGRLEEAFDFIGRMGVEADDKML-CSLLSACKIHKNIGMGEKVAKLLS--EHYRIDSGSF 463
Query: 175 TFVSLLYA 182
+S YA
Sbjct: 464 IMLSNFYA 471
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 160/447 (35%), Positives = 258/447 (57%), Gaps = 25/447 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +L ++L +MY K GS+ E V +P++++++W T+I G +QN L + L+ +
Sbjct: 427 GMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELF 486
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ F+PD IT V+ +C+ LA L +G++IH +++ G D+ V +L+ MY++C
Sbjct: 487 LDMQK-QFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKC 545
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L + F D++ W+ MIA YG HG G EAI+ F +M E ++ +F ++L
Sbjct: 546 GLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAIL 605
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL +G +FF+ M + +P+LEHY CVVDLL R G L +A I +MP+K +
Sbjct: 606 NACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPD 665
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
IW LLS C+ H +A ++AE I + P + YV+L+N++A A++W+ V + R+
Sbjct: 666 TTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKR 725
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M++R K+ PG SW+E+ + + F G+ HP++ +ID+ L +LT +M+ Y
Sbjct: 726 MQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKKIDVLLSKLTMQMQNEDYSSMFRYV 785
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPFKYISEIKNR-------------- 406
+ + D EKE HSEK A+AF G++ + P + + KNR
Sbjct: 786 LINEDDMEKEMIQCGHSEKSAMAF-----GILNLPPGRTVRVSKNRRVCGDCHEMGKFMS 840
Query: 407 -----EIIVRDASRFHHFRNGKCSCGD 428
EI++RD++RFHHF++G CSC D
Sbjct: 841 KTTKMEIVLRDSNRFHHFKDGLCSCRD 867
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 158/312 (50%), Gaps = 9/312 (2%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F ++V ++L MY K G+L +V M +++W ++IA + GL D + ++
Sbjct: 327 FSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFD 386
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M+ G RPD T S++ +C+ ++L +G+ +H+ V+K G ++ V ++LI+MY++CG
Sbjct: 387 EMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCG 446
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
++++ F + D+V W++MI Y + EA+ LF M QK+F+ +D+T +L
Sbjct: 447 SVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDM-QKQFKPDDITMACVLP 505
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC-VVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+ +KG E ++++ H C +VD+ +CG L A L +P K +
Sbjct: 506 ACAGLAALDKGREIHGHILRRGYFSDL--HVACALVDMYAKCGLLVLAQLLFDMIP-KKD 562
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEE--ILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
I W +++ H + A E I G+ P +++ +L+ S +G F
Sbjct: 563 LISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFN 622
Query: 299 EAMRERNVKKEP 310
E V EP
Sbjct: 623 SMRNECGV--EP 632
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 131/250 (52%), Gaps = 2/250 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF + +SL Y K G + + + +V++W ++I G NG + + L+ +
Sbjct: 225 GFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIF 284
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M ++G D T VSV+ +C+ + L G+ +H VKA S +V ++L+ MYS+C
Sbjct: 285 IQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKC 344
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L+ + + F++ + +V W+S+IAAY G +AI LF++M+ K + T S++
Sbjct: 345 GNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIV 404
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
+AC+ +KG + ++K L ++++ +CG ++EA + +PVK +
Sbjct: 405 HACACSSSLDKGRDVHSYVIKN-GMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVK-D 462
Query: 241 AIIWKTLLSA 250
+ W T++
Sbjct: 463 IVSWNTMIGG 472
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 135/293 (46%), Gaps = 13/293 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +D G+ L MY+ G LV+G K+ + V W L++ A+ G + + +
Sbjct: 124 GISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLF 183
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ +G + TF V+ + L + + +++H V+K G + V++SLI+ Y +
Sbjct: 184 KKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKF 243
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMI---AAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
G ++ + F E DVV W+SMI GF G G E +F QM E + T V
Sbjct: 244 GGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLE---IFIQMLILGVEVDLTTLV 300
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
S+L AC++ G G VK + + T ++D+ +CG L+ A + M
Sbjct: 301 SVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNT-LLDMYSKCGNLNGATEVFVKMG- 358
Query: 238 KANAIIWKTLLSA-CKTHKSTDMAGRIAE-EILGVNPQDAAPYVLLSNIHASA 288
+ W ++++A + +D G E + GV P Y + S +HA A
Sbjct: 359 DTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPD---IYTVTSIVHACA 408
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 59/107 (55%)
Query: 74 TFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLEC 133
++ SV+ C+E +L G+++H+ ++ G S+D + + L+ MY CG L K F +
Sbjct: 96 SYCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKI 155
Query: 134 EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
V LW+ +++ Y G E+++LF++M++ N TF +L
Sbjct: 156 MNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVL 202
>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 162/444 (36%), Positives = 255/444 (57%), Gaps = 15/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E D+ G++L MY K G + +V + R+V+ W +++A +QNG ++ L
Sbjct: 132 GLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQPDESLALC 191
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+M G +P + TFV I++ ++ L QG+++H + G + V ++L+ MY++
Sbjct: 192 RVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTALMDMYAKS 251
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ + F E VV W++MI Y HG EA++LF++M+ K + +TFV +L
Sbjct: 252 GSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEMKGKVL-PDHITFVGVL 310
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL +G F M+ + P ++HYTC++DLLG CG L+EA LI M V+ +
Sbjct: 311 AACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIMEMRVEPD 370
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A +W LL +CK H + +M E+++ + P D YV+LSN++A A +W GV+ R+
Sbjct: 371 AGVWGALLHSCKIHGNVEMGELALEKLVELEPDDGGNYVILSNMYAQAGKWDGVARLRDL 430
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M + +KK SW+E+ N+VH F D SHP+S I L+ MK GY P G+
Sbjct: 431 MMNKGLKKSIACSWIEVGNKVHAFLSEDTSHPKSEAIYAELKRTGKLMKEAGYAPQVGSV 490
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAF-----AEHTRGLIVM---------LPFKYISEIKNR 406
HD++ +EK + HSE+LAIAF + T+ LI+ + K+IS+I R
Sbjct: 491 FHDVEDDEKVDMVSCHSERLAIAFGLISTSAGTKLLIIKNLRICEDCHVAIKFISKITER 550
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
EI +RD +R+HHF++G CSCGD+W
Sbjct: 551 EITIRDVNRYHHFKDGVCSCGDFW 574
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 152/308 (49%), Gaps = 5/308 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + + + L ++Y SL + + RN+ W +I G A NG E + Y
Sbjct: 31 GISFNPLLATKLVNLYCICNSLTNAHLLFDRISKRNLFLWNVMIRGYAWNGPYELAISLY 90
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
MR G PDK TF V+ +CS L+ + +G++IH +V+++G DV V ++LI MY++C
Sbjct: 91 YQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIRSGLESDVFVGAALIDMYAKC 150
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
GC++ + + F + + DVV W+SM+A Y +G+ +E++ L M + + TFV +
Sbjct: 151 GCVESARQVFDKIDERDVVCWNSMLATYSQNGQPDESLALCRVMAFNGLKPTEGTFVISI 210
Query: 181 YACSHCGLKEKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
A + GL +G E + + +++ T ++D+ + G ++ A +L + K
Sbjct: 211 AASADNGLLPQGKELHGYSWRHGFESNDKVK--TALMDMYAKSGSVNVARSLFELLEEK- 267
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYV-LLSNIHASAKRWQGVSEFR 298
+ W +++ H + A + +E+ G D +V +L+ +G FR
Sbjct: 268 RVVSWNAMITGYAMHGHANEALDLFKEMKGKVLPDHITFVGVLAACSHGGLLNEGKMHFR 327
Query: 299 EAMRERNV 306
+ + N+
Sbjct: 328 SMISDFNI 335
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 86/184 (46%), Gaps = 2/184 (1%)
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
+ S++ SC + G+Q+HA + + G S + + + L+++Y C L ++ F
Sbjct: 4 YASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRIS 63
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGME 194
++ LW+ MI Y ++G E AI+L+ QM + TF +L ACS E+G +
Sbjct: 64 KRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKK 123
Query: 195 FFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
+++ ++D+ +CG ++ A + + + + + W ++L+ +
Sbjct: 124 IHKDVIRSGLESDVFVG-AALIDMYAKCGCVESARQVFDKIDER-DVVCWNSMLATYSQN 181
Query: 255 KSTD 258
D
Sbjct: 182 GQPD 185
>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 673
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 172/448 (38%), Positives = 248/448 (55%), Gaps = 27/448 (6%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
FE D+V SL MY K G + M N+I W +I+G A NG E+ + +
Sbjct: 234 FEPDIVI--SLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFR 291
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
M R D IT S + + +++ +L + + + K+ D V + LI MY++CG
Sbjct: 292 EMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCG 351
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+ + F DVVLWS MI YG HG G+EAI L+ +M+Q ND TF+ LL
Sbjct: 352 SIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLT 411
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
AC + GL ++G E F LM + +P +HY+CVVDLLGR GYL++A I +MP+K
Sbjct: 412 ACKNSGLVKEGWELFHLM-PDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGV 470
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
+W LLSACK H+ + AE++ ++P + YV LSN++ASA W V+ R M
Sbjct: 471 SVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMM 530
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
++ + K+ G S +EI + F +GD+SHP+S EI L+ L +K GYVP + +
Sbjct: 531 TQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDRLEKRLKAAGYVPHMESVL 590
Query: 362 HDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISE 402
HD++ EE E L HHSE+LA+A+ G+I P K IS+
Sbjct: 591 HDLNHEEIEETLCHHSERLAVAY-----GIISTAPGTTLRITKNLRACINCHSAIKLISK 645
Query: 403 IKNREIIVRDASRFHHFRNGKCSCGDYW 430
+ +REII+RDA RFHHF++G CSCGD+W
Sbjct: 646 LVDREIIIRDAKRFHHFKDGVCSCGDFW 673
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 139/284 (48%), Gaps = 4/284 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF ++ +SL MY K G + V + R V++W ++I+G QNG + L+ +
Sbjct: 130 GFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVF 189
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
MR +PD I VSV+++ + + LGQG+ IH V K G + ++ SL +MY++
Sbjct: 190 KEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKR 249
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ + F E +++LW++MI+ Y +G GEEAI LF +M K + +T S +
Sbjct: 250 GLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAV 309
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
A + G E + D + K + T ++D+ +CG + A + + K +
Sbjct: 310 LASAQVGSLELA-RWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADK-D 367
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLS 282
++W ++ H A + E+ GV P D LL+
Sbjct: 368 VVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLT 411
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 120/253 (47%), Gaps = 4/253 (1%)
Query: 20 GSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVI 79
G + K R + +++ W +I G Q + + + Y M++ P+ TF+ V+
Sbjct: 48 GDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVL 107
Query: 80 SSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVV 139
+C + G G+QIH + K G +V V +SL+SMY++ G + + F + VV
Sbjct: 108 KACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVV 167
Query: 140 LWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLM 199
W+S+I+ Y +G EA+N+F++M Q + + + VS++ A ++ +G L+
Sbjct: 168 SWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLV 227
Query: 200 VK-KYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTD 258
K +P + + + + G L E A N K N I+W ++S + +
Sbjct: 228 TKLGLEFEPDI--VISLTTMYAKRG-LVEVARFFFNRMEKPNLILWNAMISGYANNGYGE 284
Query: 259 MAGRIAEEILGVN 271
A ++ E++ N
Sbjct: 285 EAIKLFREMITKN 297
>gi|357131197|ref|XP_003567226.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Brachypodium distachyon]
Length = 648
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 176/443 (39%), Positives = 251/443 (56%), Gaps = 26/443 (5%)
Query: 12 LAHMYMKSGSLVEGEKVIRLMPI--RNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV--- 66
L +Y + G+ + +V MP R++++W +++ +QNGLA D LD Y+ MR
Sbjct: 208 LISVYARRGAAL-ARQVFDEMPAASRDLVSWNAVLSAHSQNGLAVDALDLYSRMRGCDGH 266
Query: 67 GFRPDKITFVSVISSCSELA--TLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G PD +T VSV+SSC+ L ++G G + + G +V + ++LI+ Y+RCGCL
Sbjct: 267 GVEPDAVTLVSVLSSCAHLGARSVGLGVERYMRGKLPGFRTNVQLCNALINFYARCGCLP 326
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ + F E +V W+++I YG HG GE AINLF+ M + ++V V LL ACS
Sbjct: 327 QAQQLFNEMPRKSIVSWTALITGYGMHGHGEVAINLFQTMVSEGIRPDNVAMVGLLSACS 386
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
H G+ ++G ++F M Y+ +P LEHYTC+VDLLGR G L EA LI +MP+ A+ +W
Sbjct: 387 HAGMYDEGRKYFSAMESAYQLRPTLEHYTCMVDLLGRAGRLKEARELISSMPMPADGAVW 446
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
LL ACK HK+ ++ E ++ V P + YVL++NI+ + V R MRER
Sbjct: 447 GALLGACKIHKNVEIGEEAFEHVIEVEPTNVGYYVLMANIYTDTGQLDCVVRVRAMMRER 506
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHP---RSMEIDLYLEELTSEMKLRGYVPDTGADM 361
+KKEPG S++E K +VH F D SHP R E+ L LE++ E K G V G M
Sbjct: 507 GLKKEPGCSYVEHKGRVHLFMADDHSHPQAKRIYELVLKLEQMVKE-KTDGTVGIQGGRM 565
Query: 362 HDMDSEEKEYNL-KHHSEKLAIAFAE-HTRGLIVMLP------------FKYISEIKNRE 407
+ SE+ L HSEKLA+AF +T G + + K +S I NR
Sbjct: 566 IEGHSEKTAVPLIGFHSEKLAVAFGMLNTVGSEIAVIKNLRVCGNCHSFLKTVSAIANRV 625
Query: 408 IIVRDASRFHHFRNGKCSCGDYW 430
+VRDASRFH F +G CSC DYW
Sbjct: 626 FLVRDASRFHRFEDGACSCKDYW 648
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 141/291 (48%), Gaps = 28/291 (9%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNV------IAWITLIAGKAQNGLAEDVLDQYNLM 63
S+L Y + G L +++ MP+ + A+ +LI+G A + L + M
Sbjct: 103 SALLSSYSRLGLLPCAHQLLDEMPLASTPPATLCTAFNSLISGCALHALPAACFALFRRM 162
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG-C 122
R+ G R D +T ++++ + Q+HA +AG + + V + LIS+Y+R G
Sbjct: 163 RVAGVRFDAVTLLTLVPAAPPSVV----PQLHALAARAGLAAETSVANCLISVYARRGAA 218
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQM---EQKEFEANDVTFVSL 179
L V + D+V W+++++A+ +G +A++L+ +M + E + VT VS+
Sbjct: 219 LARQVFDEMPAASRDLVSWNAVLSAHSQNGLAVDALDLYSRMRGCDGHGVEPDAVTLVSV 278
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRR------KPRLEHYTCVVDLLGRCGYLDEAAALIR 233
L +C+H G + G L V++Y R + ++ +++ RCG L +A L
Sbjct: 279 LSSCAHLGARSVG-----LGVERYMRGKLPGFRTNVQLCNALINFYARCGCLPQAQQLFN 333
Query: 234 NMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLS 282
MP K + + W L++ H ++A + + ++ G+ P + A LLS
Sbjct: 334 EMPRK-SIVSWTALITGYGMHGHGEVAINLFQTMVSEGIRPDNVAMVGLLS 383
>gi|222619165|gb|EEE55297.1| hypothetical protein OsJ_03249 [Oryza sativa Japonica Group]
Length = 706
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 157/446 (35%), Positives = 254/446 (56%), Gaps = 26/446 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+V +++ G ++ MP R+ +AW +IAG G + + L ++ MR
Sbjct: 267 DVVCVTAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMR 326
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G ++T VS +++C++L L +G+ +H+ G L V + ++LI MYS+CG +
Sbjct: 327 HAGAAVGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVA 386
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+++ F +V W+S ++ +G G + + LF++ME E N VTFV +L CS
Sbjct: 387 AAMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCS 446
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
GL ++G FD M + P LEHY C+VDL GR G LD+A I MP++ + +W
Sbjct: 447 MAGLVDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVW 506
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
LL+A + HK+ ++ ++++ + ++ A +VLLSNI+A ++ W+GVS R M+ +
Sbjct: 507 GALLNASRIHKNVELGKYAMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNMMKAK 566
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
VKK PG S +E+ +VH+F +G K+HPR EI++ L E+ ++L+GY+ +T + D+
Sbjct: 567 GVKKVPGCSAIEVGGKVHEFFVGGKTHPRHKEIEMMLAEMNQRLRLQGYIANTKEVLFDI 626
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP--------------------FKYISEIK 404
+ E+KE + HSEKLAIAF +V LP K IS++
Sbjct: 627 EEEDKEDAISLHSEKLAIAFG------LVALPEDMEIRIVKNLRVCEDCHDYTKMISKVF 680
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
NREI++RD +RFHHF++G CSC DYW
Sbjct: 681 NREIVMRDRNRFHHFKDGACSCKDYW 706
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 91/192 (47%), Gaps = 11/192 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G L + G++L MY K G++ +V M RNV W + ++G A NG+ D L +
Sbjct: 364 GMRLSVTLGTALIDMYSKCGAVAAAMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALF 423
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV--ISSLISMYS 118
M G P+ +TFV V+ CS + +G+ + +K+ +D + ++ +Y
Sbjct: 424 KRMESTGVEPNGVTFVVVLRGCSMAGLVDEGRACF-DSMKSNHGIDPWLEHYGCMVDLYG 482
Query: 119 RCGCLDDSVKTF--LECEYSDVVLWSSMIAAYGFHGK---GEEAINLFEQMEQKEFEAND 173
R G LDD+V + E + V W +++ A H G+ A++ +E K A+
Sbjct: 483 RAGRLDDAVNFINGMPLEPHEGV-WGALLNASRIHKNVELGKYAMDKLMAIESKNDAAH- 540
Query: 174 VTFVSLLYACSH 185
+S +YA S
Sbjct: 541 -VLLSNIYADSQ 551
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 69/149 (46%), Gaps = 6/149 (4%)
Query: 104 SLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQ 163
S DV +++++ + G D + + F D V W++MIA Y G+ EA+ LF++
Sbjct: 265 SPDVVCVTAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDE 324
Query: 164 MEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY--TCVVDLLGR 221
M +VT VS L AC+ G E+G + R RL T ++D+ +
Sbjct: 325 MRHAGAAVGEVTLVSALTACAQLGALERGKWVHSC---AHSRGMRLSVTLGTALIDMYSK 381
Query: 222 CGYLDEAAALIRNMPVKANAIIWKTLLSA 250
CG + A + +M + N W + +S
Sbjct: 382 CGAVAAAMEVFDSMGER-NVYTWTSAVSG 409
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 160/442 (36%), Positives = 250/442 (56%), Gaps = 21/442 (4%)
Query: 7 VAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV 66
V GS+L +MY K G L +V + ++V AW LI G +N + + L L R V
Sbjct: 216 VLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEAL---QLFREV 272
Query: 67 G----FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
RP+++T ++VIS+C++L L G+ +H + + V + +SLI M+S+CG
Sbjct: 273 AGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGD 332
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
+D + + F Y D++ W+SM+ + HG G EA+ F M+ + + +++TF+ +L A
Sbjct: 333 IDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTA 392
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
CSH GL ++G + F + Y + + EHY C+VDLL R G L EA IR MP++ +
Sbjct: 393 CSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGA 452
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMR 302
IW ++L AC+ + + ++ A +L + P + Y+LLSNI+A K W V + RE M
Sbjct: 453 IWGSMLGACRVYNNLELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNEVKKVRELMN 512
Query: 303 ERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMH 362
E+ ++K PG S + I N H F GD SHP EI + L ++ ++KL GYV DT +
Sbjct: 513 EKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLAGYVADTSEVLL 572
Query: 363 DMDSEEKEYNLKHHSEKLAIAFA---EHTRGLIVMLP-----------FKYISEIKNREI 408
++D +KE ++ HSEKLA+ + G IV+L K +S+I R+I
Sbjct: 573 NIDDNKKEESVSQHSEKLALCYGLLKSEIGGRIVILKNLRVCSDCHTLIKLVSKIYQRQI 632
Query: 409 IVRDASRFHHFRNGKCSCGDYW 430
+RD +RFHHF++G CSC DYW
Sbjct: 633 TLRDRNRFHHFKDGSCSCRDYW 654
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 129/251 (51%), Gaps = 3/251 (1%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
DL ++L +MY G L + M RN + W ++I+G +N + L Y M
Sbjct: 113 DLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKME 172
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
GF PD++T +++S+C+EL LG G ++H+ + + + + S+L++MY++CG L
Sbjct: 173 EDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLK 232
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQME-QKEFEANDVTFVSLLYAC 183
+ + F + DV WS++I Y + + EA+ LF ++ N+VT ++++ AC
Sbjct: 233 TARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISAC 292
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
+ G E G D + + ++ + ++D+ +CG +D A + +M K + I
Sbjct: 293 AQLGDLETGRWVHD-YITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYK-DLIS 350
Query: 244 WKTLLSACKTH 254
W ++++ H
Sbjct: 351 WNSMVNGFALH 361
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 126/259 (48%), Gaps = 11/259 (4%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLM----RMVGFRPDKITFVSVISSCSELATLGQG 91
+V+ W +++ + + L Y M R V PD+ TF S++ C+ L G
Sbjct: 42 DVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNV---PDRFTFPSLLKGCALLLEFKVG 98
Query: 92 QQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFH 151
+ +H +VVK D+ + ++L++MY+ CG L + F + + V+W+SMI+ Y +
Sbjct: 99 KVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKN 158
Query: 152 GKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEH 211
EA+ L+++ME+ F ++VT +L+ AC+ GM+ +++ K
Sbjct: 159 HCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHS-HIREMDMKICAVL 217
Query: 212 YTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA-CKTHKSTDMAGRIAEEILGV 270
+ +V++ +CG L A + + K + W L+ K ++ST+ A ++ E+ G
Sbjct: 218 GSALVNMYAKCGDLKTARQVFDKLSDK-DVYAWSALIFGYVKNNRSTE-ALQLFREVAGG 275
Query: 271 NPQDAAPYVLLSNIHASAK 289
+ +L+ I A A+
Sbjct: 276 SNMRPNEVTILAVISACAQ 294
>gi|297597505|ref|NP_001044065.2| Os01g0715700 [Oryza sativa Japonica Group]
gi|255673627|dbj|BAF05979.2| Os01g0715700 [Oryza sativa Japonica Group]
Length = 699
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 157/446 (35%), Positives = 254/446 (56%), Gaps = 26/446 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+V +++ G ++ MP R+ +AW +IAG G + + L ++ MR
Sbjct: 260 DVVCVTAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMR 319
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G ++T VS +++C++L L +G+ +H+ G L V + ++LI MYS+CG +
Sbjct: 320 HAGAAVGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVA 379
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+++ F +V W+S ++ +G G + + LF++ME E N VTFV +L CS
Sbjct: 380 AAMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCS 439
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
GL ++G FD M + P LEHY C+VDL GR G LD+A I MP++ + +W
Sbjct: 440 MAGLVDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVW 499
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
LL+A + HK+ ++ ++++ + ++ A +VLLSNI+A ++ W+GVS R M+ +
Sbjct: 500 GALLNASRIHKNVELGKYAMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNMMKAK 559
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
VKK PG S +E+ +VH+F +G K+HPR EI++ L E+ ++L+GY+ +T + D+
Sbjct: 560 GVKKVPGCSAIEVGGKVHEFFVGGKTHPRHKEIEMMLAEMNQRLRLQGYIANTKEVLFDI 619
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP--------------------FKYISEIK 404
+ E+KE + HSEKLAIAF +V LP K IS++
Sbjct: 620 EEEDKEDAISLHSEKLAIAFG------LVALPEDMEIRIVKNLRVCEDCHDYTKMISKVF 673
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
NREI++RD +RFHHF++G CSC DYW
Sbjct: 674 NREIVMRDRNRFHHFKDGACSCKDYW 699
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 91/192 (47%), Gaps = 11/192 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G L + G++L MY K G++ +V M RNV W + ++G A NG+ D L +
Sbjct: 357 GMRLSVTLGTALIDMYSKCGAVAAAMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALF 416
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV--ISSLISMYS 118
M G P+ +TFV V+ CS + +G+ + +K+ +D + ++ +Y
Sbjct: 417 KRMESTGVEPNGVTFVVVLRGCSMAGLVDEGRACF-DSMKSNHGIDPWLEHYGCMVDLYG 475
Query: 119 RCGCLDDSVKTF--LECEYSDVVLWSSMIAAYGFHGK---GEEAINLFEQMEQKEFEAND 173
R G LDD+V + E + V W +++ A H G+ A++ +E K A+
Sbjct: 476 RAGRLDDAVNFINGMPLEPHEGV-WGALLNASRIHKNVELGKYAMDKLMAIESKNDAAH- 533
Query: 174 VTFVSLLYACSH 185
+S +YA S
Sbjct: 534 -VLLSNIYADSQ 544
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 69/149 (46%), Gaps = 6/149 (4%)
Query: 104 SLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQ 163
S DV +++++ + G D + + F D V W++MIA Y G+ EA+ LF++
Sbjct: 258 SPDVVCVTAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDE 317
Query: 164 MEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY--TCVVDLLGR 221
M +VT VS L AC+ G E+G + R RL T ++D+ +
Sbjct: 318 MRHAGAAVGEVTLVSALTACAQLGALERGKWVHSC---AHSRGMRLSVTLGTALIDMYSK 374
Query: 222 CGYLDEAAALIRNMPVKANAIIWKTLLSA 250
CG + A + +M + N W + +S
Sbjct: 375 CGAVAAAMEVFDSMGER-NVYTWTSAVSG 402
>gi|356537109|ref|XP_003537073.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Glycine max]
Length = 630
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 181/444 (40%), Positives = 265/444 (59%), Gaps = 18/444 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF DL +SL MY+K G + KV M +R++I W +I+G AQNG A VL+ Y
Sbjct: 191 GFVTDLAVANSLVTMYVKCGEVELARKVFDEMLVRDLITWNAMISGYAQNGHARCVLEVY 250
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ M++ G D +T + V+S+C+ L G G+++ E+ + G + + ++L++MY+RC
Sbjct: 251 SEMKLSGVSADAVTLLGVMSACANLGAQGIGREVEREIERRGFGCNPFLRNALVNMYARC 310
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L + + F VV W+++I YG HG GE A+ LF++M + + FVS+L
Sbjct: 311 GNLTRAREVFDRSGEKSVVSWTAIIGGYGIHGHGEVALELFDEMVESAVRPDKTVFVSVL 370
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL ++G+E+F M +KY +P EHY+CVVDLLGR G L+EA LI++M VK +
Sbjct: 371 SACSHAGLTDRGLEYFKEMERKYGLQPGPEHYSCVVDLLGRAGRLEEAVNLIKSMKVKPD 430
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
+W LL ACK HK+ ++A + ++ + P + YVLLSNI+ A +GVS R
Sbjct: 431 GAVWGALLGACKIHKNAEIAELAFQHVVELEPTNIGYYVLLSNIYTDANNLEGVSRVRVM 490
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
MRER ++K+PG S++E K +++ F GD SHP++ +I L+EL S +K + P+
Sbjct: 491 MRERKLRKDPGYSYVEYKGKMNLFYSGDLSHPQTKQIYRMLDELESLVK-EVHPPNEKCQ 549
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFA----EHTRGLIVM----------LPFKYISEIKNR 406
SEE HSEKLAIAFA + + VM L K +S+I NR
Sbjct: 550 GR---SEELLIGTGVHSEKLAIAFALLNTKSGTEITVMKNLRVCVDCHLFIKLVSKIVNR 606
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
+ IVRDA+RFHHFR+G CSC DYW
Sbjct: 607 QFIVRDATRFHHFRDGICSCKDYW 630
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 144/320 (45%), Gaps = 14/320 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + D SSL + Y K KV MP I + +I+G + N + +
Sbjct: 84 GSQPDPYTRSSLINTYAKCSLHHHARKVFDEMP-NPTICYNAMISGYSFNSKPLHAVCLF 142
Query: 61 NLMRM-------VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSL 113
MR V + +T +S++S CS L G +H V+ G D+ V +SL
Sbjct: 143 RKMRREEEDGLDVDVNVNAVTLLSLVSGCSVATHLTIGVCLHGCCVRFGFVTDLAVANSL 202
Query: 114 ISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEAND 173
++MY +CG ++ + K F E D++ W++MI+ Y +G + ++ +M+ A+
Sbjct: 203 VTMYVKCGEVELARKVFDEMLVRDLITWNAMISGYAQNGHARCVLEVYSEMKLSGVSADA 262
Query: 174 VTFVSLLYACSHCGLKEKGMEFFDLMVKK-YRRKPRLEHYTCVVDLLGRCGYLDEAAALI 232
VT + ++ AC++ G + G E + ++ + P L + +V++ RCG L A +
Sbjct: 263 VTLLGVMSACANLGAQGIGREVEREIERRGFGCNPFLRN--ALVNMYARCGNLTRAREVF 320
Query: 233 RNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKR 290
K+ + W ++ H ++A + +E++ V P +LS +
Sbjct: 321 DRSGEKS-VVSWTAIIGGYGIHGHGEVALELFDEMVESAVRPDKTVFVSVLSACSHAGLT 379
Query: 291 WQGVSEFREAMRERNVKKEP 310
+G+ F+E R+ ++ P
Sbjct: 380 DRGLEYFKEMERKYGLQPGP 399
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 85/180 (47%), Gaps = 10/180 (5%)
Query: 78 VISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSD 137
++ SC+ L+ Q+HA V++ G+ D SSLI+ Y++C + K F E +
Sbjct: 60 LLKSCAFLSLPLAASQLHAHVIRTGSQPDPYTRSSLINTYAKCSLHHHARKVFDEMP-NP 118
Query: 138 VVLWSSMIAAYGFHGKGEEAINLFEQMEQKE-------FEANDVTFVSLLYACSHCGLKE 190
+ +++MI+ Y F+ K A+ LF +M ++E N VT +SL+ CS
Sbjct: 119 TICYNAMISGYSFNSKPLHAVCLFRKMRREEEDGLDVDVNVNAVTLLSLVSGCSVATHLT 178
Query: 191 KGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
G+ V ++ L +V + +CG ++ A + M V+ + I W ++S
Sbjct: 179 IGVCLHGCCV-RFGFVTDLAVANSLVTMYVKCGEVELARKVFDEMLVR-DLITWNAMISG 236
>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
Length = 605
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 154/440 (35%), Positives = 252/440 (57%), Gaps = 24/440 (5%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L +Y + ++ ++ + + +W +I+G QNGL + + + M+
Sbjct: 171 TALTTVYCRLNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVN 230
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
P+ +T S++S+C+++ L G+ +H+ + +V V ++LI MY++CG + + +
Sbjct: 231 PNPVTVTSILSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVAREL 290
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F + V W++MI+ YG HG G+EA+ LF M + +TF+S+LYACSH GL
Sbjct: 291 FDLMPEKNEVTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLV 350
Query: 190 EKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLS 249
++G F MV + +P EHY C+VD+LGR G L +A I+ MPV+ +W LL
Sbjct: 351 KEGDGIFHTMVHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLG 410
Query: 250 ACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKE 309
AC HK T++A +E++ ++P++ YVL+SNI++ +++ + R+ +++ + K
Sbjct: 411 ACMIHKDTNLAHVASEKLFELDPENIGYYVLMSNIYSVERKYPQAASVRQVAKKKRLAKT 470
Query: 310 PGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEK 369
PG + +EI H FT GD+SHP+S I L++LT +M G+ +T +HD++ EEK
Sbjct: 471 PGCTLIEIGQVPHVFTSGDQSHPQSKAIYAELDKLTGKMTEAGFQTETTTVLHDLEEEEK 530
Query: 370 EYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREIIV 410
E +K HSEKLAIAF GLI P K++S+I R I+V
Sbjct: 531 ELTMKVHSEKLAIAF-----GLISTEPGAEIRIIKNLRVCLDCHNWTKFLSKITKRVIVV 585
Query: 411 RDASRFHHFRNGKCSCGDYW 430
RDA+RFHHF++G CSCGDYW
Sbjct: 586 RDANRFHHFKDGLCSCGDYW 605
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 100/220 (45%), Gaps = 2/220 (0%)
Query: 35 RNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQI 94
+++I+ +I+G NG ED + + + G R T V +I S I
Sbjct: 95 KDLISCNAMISGFTCNGETEDSVRLFKELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCI 154
Query: 95 HAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKG 154
H VK G V ++L ++Y R + + + F E + W++MI+ +G
Sbjct: 155 HGFCVKLGIVSHSSVSTALTTVYCRLNEMIFARQLFDESAEKTLASWNAMISGCTQNGLT 214
Query: 155 EEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTC 214
+ AI+LF+ M++ N VT S+L AC+ G G E+ ++K R + + T
Sbjct: 215 DAAISLFQTMQKNNVNPNPVTVTSILSACAQIGALSLG-EWVHSLIKSNRFESNVYVSTA 273
Query: 215 VVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
++D+ +CG + A L MP K N + W ++S H
Sbjct: 274 LIDMYAKCGSITVARELFDLMPEK-NEVTWNAMISGYGLH 312
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 129/304 (42%), Gaps = 47/304 (15%)
Query: 43 LIAGKAQNGLAEDVLDQYNLMRM-VGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA 101
+I+G +N ED + + M + G R D T ++V+ + +EL L G QI +K
Sbjct: 1 MISGFVKNSCFEDSIRVFGDMVLGNGPRFDLTTVIAVLPAVAELQELKLGMQILCLAIKC 60
Query: 102 GASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLF 161
G V +++ LIS++S+CG ++ + F E D++ ++MI+ + +G+ E+++ LF
Sbjct: 61 GFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLF 120
Query: 162 EQMEQKEFEANDVTFVSLL---------YACS------------------------HCGL 188
+++ + T V L+ Y C+ +C L
Sbjct: 121 KELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCRL 180
Query: 189 KEK--GMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP---VKANAII 243
E + FD +K L + ++ + G D A +L + M V N +
Sbjct: 181 NEMIFARQLFDESAEK-----TLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVT 235
Query: 244 WKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYV--LLSNIHASAKRWQGVSEFREAM 301
++LSAC + + G ++ N ++ YV L +++A E + M
Sbjct: 236 VTSILSACAQIGALSL-GEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLM 294
Query: 302 RERN 305
E+N
Sbjct: 295 PEKN 298
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 51/98 (52%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
FE ++ ++L MY K GS+ ++ LMP +N + W +I+G +G ++ L +
Sbjct: 264 FESNVYVSTALIDMYAKCGSITVARELFDLMPEKNEVTWNAMISGYGLHGHGQEALKLFY 323
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVV 99
M +P +TF+SV+ +CS + +G I +V
Sbjct: 324 DMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFHTMV 361
>gi|218188961|gb|EEC71388.1| hypothetical protein OsI_03510 [Oryza sativa Indica Group]
Length = 706
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 157/446 (35%), Positives = 254/446 (56%), Gaps = 26/446 (5%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+V +++ G ++ MP R+ +AW +IAG G + + L ++ MR
Sbjct: 267 DVVCVTAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMR 326
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G ++T VS +++C++L L +G+ +H+ G L V + ++LI MYS+CG +
Sbjct: 327 HAGAAVGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVA 386
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+++ F +V W+S ++ +G G + + LF++ME E N VTFV +L CS
Sbjct: 387 AAMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCS 446
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
GL ++G FD M + P LEHY C+VDL GR G LD+A I MP++ + +W
Sbjct: 447 MAGLVDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVW 506
Query: 245 KTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRER 304
LL+A + HK+ ++ ++++ + ++ A +VLLSNI+A ++ W+GVS R M+ +
Sbjct: 507 GALLNASRIHKNVELGKYAMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNMMKAK 566
Query: 305 NVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDM 364
VKK PG S +E+ +VH+F +G K+HPR EI++ L E+ ++L+GY+ +T + D+
Sbjct: 567 GVKKVPGCSAIEVGGKVHEFFVGGKTHPRHKEIEMMLAEMNQRLRLQGYIANTKEVLFDI 626
Query: 365 DSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP--------------------FKYISEIK 404
+ E+KE + HSEKLAIAF +V LP K IS++
Sbjct: 627 EEEDKEDAISLHSEKLAIAFG------LVALPEDMEIRIVKNLRVCEDCHDYTKMISKVF 680
Query: 405 NREIIVRDASRFHHFRNGKCSCGDYW 430
NREI++RD +RFHHF++G CSC DYW
Sbjct: 681 NREIVMRDRNRFHHFKDGACSCKDYW 706
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 91/192 (47%), Gaps = 11/192 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G L + G++L MY K G++ +V M RNV W + ++G A NG+ D L +
Sbjct: 364 GMRLSVTLGTALIDMYSKCGAVAAAMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALF 423
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV--ISSLISMYS 118
M G P+ +TFV V+ CS + +G+ + +K+ +D + ++ +Y
Sbjct: 424 KRMESTGVEPNGVTFVVVLRGCSMAGLVDEGRACF-DSMKSNHGIDPWLEHYGCMVDLYG 482
Query: 119 RCGCLDDSVKTF--LECEYSDVVLWSSMIAAYGFHGK---GEEAINLFEQMEQKEFEAND 173
R G LDD+V + E + V W +++ A H G+ A++ +E K A+
Sbjct: 483 RAGRLDDAVNFINGMPLEPHEGV-WGALLNASRIHKNVELGKYAMDKLMAIESKNDAAH- 540
Query: 174 VTFVSLLYACSH 185
+S +YA S
Sbjct: 541 -VLLSNIYADSQ 551
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 69/149 (46%), Gaps = 6/149 (4%)
Query: 104 SLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQ 163
S DV +++++ + G D + + F D V W++MIA Y G+ EA+ LF++
Sbjct: 265 SPDVVCVTAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDE 324
Query: 164 MEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY--TCVVDLLGR 221
M +VT VS L AC+ G E+G + R RL T ++D+ +
Sbjct: 325 MRHAGAAVGEVTLVSALTACAQLGALERGKWVHSC---AHSRGMRLSVTLGTALIDMYSK 381
Query: 222 CGYLDEAAALIRNMPVKANAIIWKTLLSA 250
CG + A + +M + N W + +S
Sbjct: 382 CGAVAAAMEVFDSMGER-NVYTWTSAVSG 409
>gi|9758246|dbj|BAB08745.1| unnamed protein product [Arabidopsis thaliana]
Length = 511
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 159/429 (37%), Positives = 254/429 (59%), Gaps = 18/429 (4%)
Query: 17 MKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY-NLMRMVGFRPDKITF 75
MK G +KV+R +NVI W +I G +N E+ L N++ +P+K +F
Sbjct: 86 MKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSF 145
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
S +++C+ L L + +H+ ++ +G L+ + S+L+ +Y++CG + S + F +
Sbjct: 146 ASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKR 205
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
+DV +W++MI + HG EAI +F +ME + + +TF+ LL CSHCGL E+G E+
Sbjct: 206 NDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEY 265
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK 255
F LM +++ +P+LEHY +VDLLGR G + EA LI +MP++ + +IW++LLS+ +T+K
Sbjct: 266 FGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYK 325
Query: 256 STDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWL 315
+ ++ G IA I ++ + YVLLSNI++S K+W+ + RE M + ++K G SWL
Sbjct: 326 NPEL-GEIA--IQNLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWL 382
Query: 316 EIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKH 375
E +H+F GD SH + I LE L + K +G+V DT + D+ EEKE NL +
Sbjct: 383 EFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQGFVSDTDLVLMDVSEEEKEENLNY 442
Query: 376 HSEKLAIAFA--EHTRGLIVMLP------------FKYISEIKNREIIVRDASRFHHFRN 421
HSEKLA+A+ + + G + + K +S++ NR II+RD RFH F +
Sbjct: 443 HSEKLALAYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDRIRFHRFED 502
Query: 422 GKCSCGDYW 430
G CSC DYW
Sbjct: 503 GLCSCRDYW 511
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 97/213 (45%), Gaps = 12/213 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G EL+ + S+L +Y K G + +V + +V W +I G A +GLA + + +
Sbjct: 172 GIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVF 231
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSR 119
+ M PD ITF+ ++++CS L +G++ + + + +++ + R
Sbjct: 232 SEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGR 291
Query: 120 CGCLDDSVKTFLECEY-SDVVLWSSMIAA---YGFHGKGEEAINLFEQMEQKEFEANDVT 175
G + ++ + DVV+W S++++ Y GE AI + ++ D
Sbjct: 292 AGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEIAIQNLSKA-----KSGDYV 346
Query: 176 FVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPR 208
+S +Y+ + E + +LM K+ RK +
Sbjct: 347 LLSNIYSSTKKW--ESAQKVRELMSKEGIRKAK 377
>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 882
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 170/445 (38%), Positives = 253/445 (56%), Gaps = 15/445 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G +DL ++L MY K G + + K+ M + + W T+I+ + G L
Sbjct: 438 GIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVTWNTVISACVRFGDFATGLQVT 497
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
MR PD TF+ + C+ LA G++IH +++ G ++ + ++LI MYS+C
Sbjct: 498 TQMRKNKVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKC 557
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
GCL+ S + F DVV W+ MI AYG +G+GE+A+ F ME+ + V F++L+
Sbjct: 558 GCLESSFRVFERMSRRDVVTWTGMIYAYGMYGEGEKALESFVDMEKSGIVPDSVVFIALI 617
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
YACSH GL EKG+ F+ M Y+ P +EHY CVVDLL R + +A I+ MP++ +
Sbjct: 618 YACSHSGLVEKGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIEPD 677
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A IW ++L AC+T + A R++ I+ +NP D +L SN +A+ ++W VS R++
Sbjct: 678 ASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKS 737
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
+R++++KK PG SW+EI +VH F GD S P+S I LE L S M GY+PD+
Sbjct: 738 VRDKHIKKNPGYSWIEIGKKVHVFCSGDDSAPQSEAIHKSLEILYSLMAKEGYIPDSREV 797
Query: 361 MHDMDSEEKEYNLK-HHSEKLAIAFA----EHTRGLIVMLPF----------KYISEIKN 405
+++ EE++ L HSE+LAIAF E L VM K IS+I
Sbjct: 798 SQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCSDCHEVTKLISKIVG 857
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
REI+VRDA+RFH F++G CSC D W
Sbjct: 858 REILVRDANRFHLFKDGICSCKDRW 882
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 131/259 (50%), Gaps = 21/259 (8%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE DL G++L MY + G L +V MP+R++++W +LI+G + +G E+ L+ Y
Sbjct: 136 GFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIY 195
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+ +R PD T SV+ + + L + QGQ +H +K+G + V + L++MY +
Sbjct: 196 HELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLLAMYLKF 255
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLF-EQMEQKEFEANDVTFVSL 179
D+ + F E D V +++MI Y EE++ +F E ++Q F+ + +T S+
Sbjct: 256 SRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLENLDQ--FKPDILTVTSV 313
Query: 180 LYACSHCGLKEKGMEFFDLMVKKY------RRKPRLEHYT--CVVDLLGRCGYLDEAAAL 231
L AC H DL + KY R LE ++D+ +CG + A +
Sbjct: 314 LCACGH---------LRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDV 364
Query: 232 IRNMPVKANAIIWKTLLSA 250
+M K + + W +++S
Sbjct: 365 FNSMECK-DTVSWNSIISG 382
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 128/250 (51%), Gaps = 2/250 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF L+ + L +Y K G ++ V M ++ ++W ++I+G Q+G + + +
Sbjct: 337 GFVLESTVKNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLF 396
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+M ++ + D IT++ +IS + LA L G+ +H+ +K+G +D+ V ++LI MY++C
Sbjct: 397 KMMMIMEEQADHITYLMLISLSTRLADLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKC 456
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + DS+K F D V W+++I+A G + + QM + + + TF+ L
Sbjct: 457 GEVGDSLKIFNSMGTLDTVTWNTVISACVRFGDFATGLQVTTQMRKNKVVPDMATFLVTL 516
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
C+ K G E ++ ++ + L+ ++++ +CG L+ + + M + +
Sbjct: 517 PMCASLAAKRLGKEIHCCLL-RFGYESELQIGNALIEMYSKCGCLESSFRVFERMS-RRD 574
Query: 241 AIIWKTLLSA 250
+ W ++ A
Sbjct: 575 VVTWTGMIYA 584
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 124/255 (48%), Gaps = 23/255 (9%)
Query: 7 VAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV 66
V + L MY+K + +V M +R+ + + T+I G + + E+ + + L +
Sbjct: 243 VVNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMF-LENLD 301
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
F+PD +T SV+ +C L L + I+ +++AG L+ V + LI +Y++CG + +
Sbjct: 302 QFKPDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITA 361
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHC 186
F E D V W+S+I+ Y G EA+ LF+ M E +A+ +T++ L+ +
Sbjct: 362 RDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRL 421
Query: 187 -------GLKEKGME---FFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
GL G++ + DL V ++D+ +CG + ++ + +M
Sbjct: 422 ADLKFGKGLHSNGIKSGIYIDLSVS-----------NALIDMYAKCGEVGDSLKIFNSMG 470
Query: 237 VKANAIIWKTLLSAC 251
+ + W T++SAC
Sbjct: 471 T-LDTVTWNTVISAC 484
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 88/163 (53%)
Query: 30 RLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLG 89
R+ P +NV W ++I ++NG L+ Y +R PDK TF SVI +C+ L
Sbjct: 64 RVSPAKNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAE 123
Query: 90 QGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYG 149
G ++ ++++ G D+ V ++L+ MYSR G L + + F E D+V W+S+I+ Y
Sbjct: 124 MGDLVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYS 183
Query: 150 FHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKG 192
HG EEA+ ++ ++ + T S+L A ++ + ++G
Sbjct: 184 SHGYYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQG 226
>gi|357117491|ref|XP_003560501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Brachypodium distachyon]
Length = 652
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 168/442 (38%), Positives = 255/442 (57%), Gaps = 16/442 (3%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D++ +S+ Y +S + E+V P+++++AW ++ G AQN + L+ ++ M
Sbjct: 211 DVICWTSIVVAYSRSRDMGSAEEVFGQCPVKDMVAWTAMVTGYAQNAMPMKALEVFDRMT 270
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+G D+++ IS+C++L + + + G ++V V S L+ MY++CG +D
Sbjct: 271 ALGIGIDEVSLTGAISACAQLGAVKRAAWVQEIAEMNGFGMNVVVGSGLVDMYAKCGLID 330
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQK-EFEANDVTFVSLLYAC 183
++ K F + +V +SSM+ HG+ EAI LF+ M ++ + N VTF+ +L AC
Sbjct: 331 EACKVFDGMQEKNVYTYSSMVVGLASHGRAREAIALFKDMVRRADVAPNHVTFIGVLTAC 390
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
SH G+ G +F M KY P +HYTC+VDLLGR G +DEA L+R+M V+ + +
Sbjct: 391 SHAGMVTDGRYYFAQMKDKYGILPSADHYTCMVDLLGRAGLVDEALDLVRSMTVEPHGGV 450
Query: 244 WKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRE 303
W LL AC+ H T++A AE + + P+ YVLLSN A+A +W VS+ R+ MR
Sbjct: 451 WGALLGACRIHGKTEVAKVAAEHLFKLEPEGIGNYVLLSNTLAAAGKWDEVSKVRKVMRS 510
Query: 304 RNVKKEPGVSWLEIKNQ-VHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMH 362
R +KK P VSW E ++ VHQF GD SHPR+ EI L EL +++K GYVP + ++
Sbjct: 511 RRLKKVPAVSWFEGRDGLVHQFFAGDNSHPRTREIKKALLELVAKLKHAGYVPILSSIVY 570
Query: 363 DMDSEEKEYNLKHHSEKLAIAFAEHTRG-----LIVM---------LPFKYISEIKNREI 408
D+ +EEKE L HSEKLA+ F T G IV L + +S + EI
Sbjct: 571 DVSNEEKERLLMGHSEKLALLFGLLTLGSRCTIRIVKNLRICDDCHLFIRLVSRFEPVEI 630
Query: 409 IVRDASRFHHFRNGKCSCGDYW 430
IVRD RFHHF++G+CSCG +W
Sbjct: 631 IVRDNMRFHHFKDGECSCGGFW 652
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 105/234 (44%), Gaps = 17/234 (7%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF +++V GS L MY K G + E KV M +NV + +++ G A +G A + + +
Sbjct: 308 GFGMNVVVGSGLVDMYAKCGLIDEACKVFDGMQEKNVYTYSSMVVGLASHGRAREAIALF 367
Query: 61 -NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVV-KAGASLDVGVISSLISMYS 118
+++R P+ +TF+ V+++CS + G+ A++ K G + ++ +
Sbjct: 368 KDMVRRADVAPNHVTFIGVLTACSHAGMVTDGRYYFAQMKDKYGILPSADHYTCMVDLLG 427
Query: 119 RCGCLD---DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFE--AND 173
R G +D D V++ + V W +++ A HGK E A E + + E E N
Sbjct: 428 RAGLVDEALDLVRSMTVEPHGGV--WGALLGACRIHGKTEVAKVAAEHLFKLEPEGIGNY 485
Query: 174 VTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDE 227
V + L A K V+K R RL+ V GR G + +
Sbjct: 486 VLLSNTLAAAGKWDEVSK--------VRKVMRSRRLKKVPAVSWFEGRDGLVHQ 531
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Query: 109 VISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE 168
V +SLI Y CG + + K F E DV+ W+S++ AY A +F Q K+
Sbjct: 183 VENSLIGAYIACGDVGAARKVFDEMVVKDVICWTSIVVAYSRSRDMGSAEEVFGQCPVKD 242
Query: 169 FEANDVTFVSLLYACSHCGLKEKGMEFFDLM 199
V + +++ + + K +E FD M
Sbjct: 243 M----VAWTAMVTGYAQNAMPMKALEVFDRM 269
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 166/451 (36%), Positives = 255/451 (56%), Gaps = 26/451 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF ++ + L +Y K G + + + + ++VI+W TLI G L ++ L +
Sbjct: 227 GFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLF 286
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVK--AGASLDVGVISSLISMYS 118
M G P+ +T +SV+ +C+ L + G+ IH + K G + +++SLI MY+
Sbjct: 287 QEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYA 346
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+CG ++ + + F + W++MI + HGK A +LF +M + + +D+TFV
Sbjct: 347 KCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVG 406
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
LL ACSH G+ + G F M + Y+ P+LEHY C++DLLG CG EA +IR MP++
Sbjct: 407 LLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPME 466
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
+ +IW +LL ACK H + ++ A+ ++ + P++ YVLLSNI+A+A RW V++ R
Sbjct: 467 PDGVIWCSLLKACKMHNNVELGESYAQNLIKIEPENPGSYVLLSNIYATAGRWDQVAKIR 526
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
+ ++ +KK PG S +EI + VH+F +GDK HPR+ EI LEE+ M+ G+VPDT
Sbjct: 527 TLLNDKGIKKAPGCSSIEIDSVVHEFIIGDKFHPRNREIYRMLEEMEMLMEETGFVPDTS 586
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKY 399
+ +M+ E KE L+HHSEKLAIAF GLI P K
Sbjct: 587 EVLQEMEEEWKEGALRHHSEKLAIAF-----GLISTKPGTKLTIVKNLRVCRNCHEATKL 641
Query: 400 ISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
IS+I REII RD +R H ++G SC DYW
Sbjct: 642 ISKIYKREIIARDRTRLHLLKDGVWSCHDYW 672
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 159/342 (46%), Gaps = 39/342 (11%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLA------- 53
G++LD+ +SL MY ++G L + KV R+V+++ LI G A G
Sbjct: 95 GYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITGYASRGYINNARKLF 154
Query: 54 ------------------------EDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLG 89
++ L+ Y M +PD+ T V+V+S+C++ ++
Sbjct: 155 DEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVSACAQSGSIE 214
Query: 90 QGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYG 149
G+Q+H+ + G ++ +++ LI +YS+CG ++ + F DV+ W+++I +
Sbjct: 215 LGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVISWNTLIGGHT 274
Query: 150 FHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRL 209
+EA+ LF++M + NDVT +S+L AC+H G + G + K+ +
Sbjct: 275 HMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNA 334
Query: 210 EH-YTCVVDLLGRCGYLDEAAALIRNMPVKA----NAIIWKTLLSACKTHKSTDMAGRIA 264
T ++D+ +CG ++ A + +M ++ NA+I+ + K + + D+ ++
Sbjct: 335 SSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHG-KANAAFDLFSKMR 393
Query: 265 EEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNV 306
+ G++P D LLS S G FR ++ +
Sbjct: 394 KN--GIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKI 433
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 126/274 (45%), Gaps = 35/274 (12%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
N++ W T+ G A N + L Y M +G P+ +F ++ SC++ L +GQQIH
Sbjct: 29 NLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAKSKALIEGQQIH 88
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT-------------------------- 129
V+K G LD+ V +SLISMY++ G L+D+ K
Sbjct: 89 GHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITGYASRGYIN 148
Query: 130 -----FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
F E DVV W++MI+ Y +EA+ L++ M + + ++ T V+++ AC+
Sbjct: 149 NARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVSACA 208
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
G E G + ++ + ++ ++DL +CG ++ A L + + K + I W
Sbjct: 209 QSGSIELGRQLHS-WIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGL-AKKDVISW 266
Query: 245 KTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAA 276
TL+ A + +E+L G +P D
Sbjct: 267 NTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVT 300
>gi|449446363|ref|XP_004140941.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Cucumis sativus]
Length = 576
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 163/447 (36%), Positives = 266/447 (59%), Gaps = 20/447 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D++ ++L Y K G L +K+ MP ++ +W LIAG AQ D + +
Sbjct: 133 GFNADVLLQTTLLDAYAKIGDLDLAQKLFDEMPQPDIASWNALIAGFAQGSRPADAIMTF 192
Query: 61 NLMRMVG-FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
M++ G RP+ +T + +CS+L L +G+ +H +V+ + +V V + +I MY++
Sbjct: 193 KRMKVDGNLRPNAVTVQGALLACSQLGALKEGESVHKYIVEEKLNSNVQVCNVVIDMYAK 252
Query: 120 CGCLDDSVKTF--LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
CG +D + F + C+ S ++ W++MI A+ HG G +A++LFE++ + + V+++
Sbjct: 253 CGSMDKAYWVFENMRCDKS-LITWNTMIMAFAMHGDGHKALDLFEKLGRSGMSPDAVSYL 311
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
++L AC+H GL E G++ F+ M ++ +P ++HY +VDLLGR G L EA ++ ++P
Sbjct: 312 AVLCACNHAGLVEDGLKLFNSMTQR-GLEPNIKHYGSMVDLLGRAGRLKEAYDIVSSLPF 370
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEF 297
N ++W+TLL AC+T+ +MA + +++ + +VLLSN++A+ +RW V
Sbjct: 371 P-NMVLWQTLLGACRTYGDVEMAELASRKLVEMGFISCGDFVLLSNVYAARQRWDDVGRV 429
Query: 298 REAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDT 357
R+AMR R+VKK PG S++EIK ++++F GD+SH EI L+E+ +K GY DT
Sbjct: 430 RDAMRRRDVKKTPGFSYIEIKGKMYKFVNGDQSHSSCREIYAKLDEINLRIKAYGYSADT 489
Query: 358 GADMHDMDSEEKEYNLKHHSEKLAIAFA----EHTRGLIVM----------LPFKYISEI 403
+HD+ E+KE L +HSEKLA+AF E + V+ + K IS+I
Sbjct: 490 SNVLHDIGDEDKENALCYHSEKLAVAFGLTCTEEGTPIQVIKNLRICGDCHVVIKLISKI 549
Query: 404 KNREIIVRDASRFHHFRNGKCSCGDYW 430
REIIVRD +RFH F+ G CSC DYW
Sbjct: 550 YIREIIVRDRTRFHRFKEGLCSCKDYW 576
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 129/276 (46%), Gaps = 13/276 (4%)
Query: 20 GSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVG--FRPDKITFVS 77
G L + R +P + W +I G A + + + Y M R D +T
Sbjct: 49 GDLSYALHIFRYIPYPSTNDWNAVIRGTALSSDPANAVFWYRAMAASNGLHRIDALTCSF 108
Query: 78 VISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSD 137
+ +C+ + Q+H+++++ G + DV + ++L+ Y++ G LD + K F E D
Sbjct: 109 ALKACARALARSEAIQLHSQLLRFGFNADVLLQTTLLDAYAKIGDLDLAQKLFDEMPQPD 168
Query: 138 VVLWSSMIAAYGFHGKGEEAINLFEQME-QKEFEANDVTFVSLLYACSHCGLKEKGMEFF 196
+ W+++IA + + +AI F++M+ N VT L ACS G ++G
Sbjct: 169 IASWNALIAGFAQGSRPADAIMTFKRMKVDGNLRPNAVTVQGALLACSQLGALKEGESVH 228
Query: 197 DLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKT--- 253
+V++ + ++ V+D+ +CG +D+A + NM + I W T++ A
Sbjct: 229 KYIVEE-KLNSNVQVCNVVIDMYAKCGSMDKAYWVFENMRCDKSLITWNTMIMAFAMHGD 287
Query: 254 -HKSTDMAGRIAEEILGVNPQDAAPY--VLLSNIHA 286
HK+ D+ ++ G++P DA Y VL + HA
Sbjct: 288 GHKALDLFEKLGRS--GMSP-DAVSYLAVLCACNHA 320
>gi|357498701|ref|XP_003619639.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494654|gb|AES75857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1182
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 168/447 (37%), Positives = 261/447 (58%), Gaps = 27/447 (6%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D + +++ Y+ SG++V +++ M R+V++W T+IAG Q G + LD ++ M
Sbjct: 343 DFYSWNTMIGAYVGSGNMVLAKELFDEMHERDVVSWSTIIAGYVQVGCFMEALDFFHKML 402
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
+P++ T VS +++CS L L QG+ IH + + ++ +++SLI MY++CG +D
Sbjct: 403 QSEVKPNEYTMVSALAACSNLVALDQGKWIHVYIRRDNIKMNDRLLASLIDMYAKCGEID 462
Query: 125 DSVKTFLECEYSDVVL-WSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 183
+ F E + V W++MI + HGK EEAIN+FE+M+ ++ N VTF++LL AC
Sbjct: 463 SASSVFHEHKVKRKVWPWNAMIGGFAMHGKPEEAINVFEKMKVEKVSPNKVTFIALLNAC 522
Query: 184 SHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
SH + ++G +F+LM Y P +EHY C+VDLL R G+L ++ +I +MP+ + I
Sbjct: 523 SHGYMVKEGKSYFELMASDYGINPEIEHYGCMVDLLSRSGHLKDSEEMILSMPMAPDVAI 582
Query: 244 WKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMR- 302
W LL+AC+ +K + RI I ++P VLL NI++++ RW RE
Sbjct: 583 WGALLNACRIYKDMERGYRIGRIIKEIDPNHIGCNVLLGNIYSTSGRWNEARMVREKNEI 642
Query: 303 ERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMH 362
+ KK PG S +E+ H+F +GD+SHP+S EI +L+E+ S++K+ GYVP+ G +
Sbjct: 643 NSDRKKIPGFSSIELNGVFHEFLVGDRSHPQSREIYSFLDEMISKLKIAGYVPELGEVLL 702
Query: 363 DMDSEE-KEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKYISE 402
D D EE KE L HSEKLAIAF GL+ P K+IS+
Sbjct: 703 DFDDEEDKETALSVHSEKLAIAF-----GLMNTAPGTPIRIVKNLRVCGDCHQATKFISK 757
Query: 403 IKNREIIVRDASRFHHFRNGKCSCGDY 429
+ +R IIVRD R+HHF++G CSC DY
Sbjct: 758 VYDRVIIVRDRMRYHHFKDGICSCKDY 784
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 136/311 (43%), Gaps = 43/311 (13%)
Query: 12 LAHMYMKS---GSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY----NLMR 64
+A+ ++K+ SL K+ +P ++ + T+I K+ + LD +L+R
Sbjct: 213 IANKFLKNVALASLTYAHKLFDQIPQPDLFIYNTMI--KSHSMSPHSYLDSIAVFRSLIR 270
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
G+ P++ +FV +C + +G+Q+ VK G +V V+++LI M+ + G ++
Sbjct: 271 DSGYFPNRYSFVFAFGACGNGMCVREGEQVFTHAVKVGLDGNVFVVNALIGMFGKWGRVE 330
Query: 125 DSVKTFLECEYSDVVLWSSMIAAY-----------------------------GFHGKG- 154
D+ F D W++MI AY G+ G
Sbjct: 331 DARNVFDSAVDRDFYSWNTMIGAYVGSGNMVLAKELFDEMHERDVVSWSTIIAGYVQVGC 390
Query: 155 -EEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYT 213
EA++ F +M Q E + N+ T VS L ACS+ ++G ++ + +++ K
Sbjct: 391 FMEALDFFHKMLQSEVKPNEYTMVSALAACSNLVALDQG-KWIHVYIRRDNIKMNDRLLA 449
Query: 214 CVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAE--EILGVN 271
++D+ +CG +D A+++ VK W ++ H + A + E ++ V+
Sbjct: 450 SLIDMYAKCGEIDSASSVFHEHKVKRKVWPWNAMIGGFAMHGKPEEAINVFEKMKVEKVS 509
Query: 272 PQDAAPYVLLS 282
P LL+
Sbjct: 510 PNKVTFIALLN 520
>gi|145359106|ref|NP_199912.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635749|sp|Q9FI49.2|PP428_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g50990
gi|332008636|gb|AED96019.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 534
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 159/429 (37%), Positives = 254/429 (59%), Gaps = 18/429 (4%)
Query: 17 MKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY-NLMRMVGFRPDKITF 75
MK G +KV+R +NVI W +I G +N E+ L N++ +P+K +F
Sbjct: 109 MKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSF 168
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
S +++C+ L L + +H+ ++ +G L+ + S+L+ +Y++CG + S + F +
Sbjct: 169 ASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKR 228
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
+DV +W++MI + HG EAI +F +ME + + +TF+ LL CSHCGL E+G E+
Sbjct: 229 NDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEY 288
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK 255
F LM +++ +P+LEHY +VDLLGR G + EA LI +MP++ + +IW++LLS+ +T+K
Sbjct: 289 FGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYK 348
Query: 256 STDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWL 315
+ ++ G IA I ++ + YVLLSNI++S K+W+ + RE M + ++K G SWL
Sbjct: 349 NPEL-GEIA--IQNLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWL 405
Query: 316 EIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKH 375
E +H+F GD SH + I LE L + K +G+V DT + D+ EEKE NL +
Sbjct: 406 EFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQGFVSDTDLVLMDVSEEEKEENLNY 465
Query: 376 HSEKLAIAFA--EHTRGLIVMLP------------FKYISEIKNREIIVRDASRFHHFRN 421
HSEKLA+A+ + + G + + K +S++ NR II+RD RFH F +
Sbjct: 466 HSEKLALAYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDRIRFHRFED 525
Query: 422 GKCSCGDYW 430
G CSC DYW
Sbjct: 526 GLCSCRDYW 534
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 49/93 (52%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G EL+ + S+L +Y K G + +V + +V W +I G A +GLA + + +
Sbjct: 195 GIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVF 254
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQ 93
+ M PD ITF+ ++++CS L +G++
Sbjct: 255 SEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKE 287
>gi|125529196|gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
Length = 785
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 164/450 (36%), Positives = 252/450 (56%), Gaps = 35/450 (7%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
F+ D GS+L +Y SG + +G + R P +++ W +++G QN L E L ++
Sbjct: 350 FQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFH 409
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
G +PD T SV+++C+ LA G+QI K+G + +S + MY+R G
Sbjct: 410 ESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSG 469
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLY 181
+D + + F E E DVV WS++I+ + HG +A++ F++M + N++TF+ +L
Sbjct: 470 DVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLT 529
Query: 182 ACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANA 241
ACSH GL ++G+ +++ M K Y P ++H TCVVDLLGR G L +A A I N A+
Sbjct: 530 ACSHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNGIFHADP 589
Query: 242 IIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
+IW++LL++C+ H+ + +A I+ + P +A YV+L N++ A S+ R+ M
Sbjct: 590 VIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVILYNMYLDAGELSLASKTRDLM 649
Query: 302 RERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADM 361
++R VKKEPG+SW+E+K VH F GDKSHP S I LEE+ S ++
Sbjct: 650 KQRGVKKEPGLSWIELKCGVHSFVAGDKSHPESSAIYTKLEEMLSRIEKLATT------- 702
Query: 362 HDMDSEEKEYNLKH-HSEKLAIAFAEHTRGLIVMLP--------------------FKYI 400
D + ++E NL + HSEKLA+A ++ LP K I
Sbjct: 703 -DTEISKREQNLMNCHSEKLAVALG------MIHLPQSAPIRVMKNLRVCRDCHSTMKLI 755
Query: 401 SEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
S+ +NREII+RD RFHHFR+G CSC DYW
Sbjct: 756 SKSENREIILRDPIRFHHFRDGSCSCADYW 785
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 138/277 (49%), Gaps = 10/277 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + +SL MY K G + E +V + R+ ++W +L++G + G E+++ +
Sbjct: 139 GLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVF 198
Query: 61 NLMRMVGFRPDKITFVSVISSCSEL--ATLGQGQQIHAEVVKAGASLDVGVISSLISMYS 118
+MR G + SVI CS T+ + +H V+KAG DV ++S++I MY+
Sbjct: 199 AMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYA 258
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAY----GFHGK--GEEAINLFEQMEQKEFEAN 172
+ G L ++ F + +VV++++MIA + GK EA+ L+ +++ + +
Sbjct: 259 KKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPT 318
Query: 173 DVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALI 232
+ TF S+L AC+ G E G + ++ KY + + ++DL G +++
Sbjct: 319 EFTFSSVLRACNLAGYLEFGKQIHGQVI-KYTFQEDDFIGSALIDLYFNSGCMEDGFRCF 377
Query: 233 RNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILG 269
R+ P K + + W ++S C ++ + A + E LG
Sbjct: 378 RSSP-KHDIVTWTAMVSGCVQNELHEKALSLFHESLG 413
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 161/352 (45%), Gaps = 29/352 (8%)
Query: 10 SSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFR 69
++L Y + G + +++ MP RN +++ LI ++ GLA L+ R G
Sbjct: 47 NTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVD 106
Query: 70 PDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKT 129
D+ ++ + +++CS L G+ +HA + G S V V +SL+SMYS+CG + ++ +
Sbjct: 107 VDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRV 166
Query: 130 FLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLK 189
F E D V W+S+++ Y G EE + +F M + N S++ CS G
Sbjct: 167 FDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCS--GRG 224
Query: 190 EKGMEFFDLM---VKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKT 246
+ M+ + + V K + + ++D+ + G L EAAAL R++ + N +++ T
Sbjct: 225 DGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQ-EPNVVMFNT 283
Query: 247 LLSA-CKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERN 305
+++ C+T T + +A E L L S + + + + F +R N
Sbjct: 284 MIAGFCRTE--TVIGKEVASEAL----------TLYSEVQSRGMQPTEFT-FSSVLRACN 330
Query: 306 VKKEPGVSWLEIKNQVH----QFTMGDKSHPRSMEIDLYLEELTSEMKLRGY 353
+ +LE Q+H ++T + S IDLY E R +
Sbjct: 331 L-----AGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCF 377
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 127/264 (48%), Gaps = 16/264 (6%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNG------LAE 54
G + D+ S++ MY K G+LVE + R + NV+ + T+IAG + +A
Sbjct: 242 GLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVAS 301
Query: 55 DVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLI 114
+ L Y+ ++ G +P + TF SV+ +C+ L G+QIH +V+K D + S+LI
Sbjct: 302 EALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALI 361
Query: 115 SMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDV 174
+Y GC++D + F D+V W++M++ + E+A++LF + + +
Sbjct: 362 DLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLF 421
Query: 175 TFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCV----VDLLGRCGYLDEAAA 230
T S++ AC+ + G + ++ + K + +T + V + R G +D A
Sbjct: 422 TISSVMNACASLAVARAGEQ-----IQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATR 476
Query: 231 LIRNMPVKANAIIWKTLLSACKTH 254
+ M + + W ++S H
Sbjct: 477 RFQEME-SHDVVSWSAVISCHAQH 499
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 89/171 (52%), Gaps = 7/171 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF+ V G+S HMY +SG + + + M +V++W +I+ AQ+G A D L +
Sbjct: 450 GFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFF 509
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSR 119
+ M P++ITF+ V+++CS + +G + + + K G S + + ++ + R
Sbjct: 510 DEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVDLLGR 569
Query: 120 CGCLDDSVKTFLE--CEYSDVVLWSSMIAAYGFHG---KGEEAINLFEQME 165
G L D+ + F+ ++D V+W S++A+ H +G+ N ++E
Sbjct: 570 AGRLADA-EAFISNGIFHADPVIWRSLLASCRIHRDLERGQLVANRIMELE 619
>gi|449436862|ref|XP_004136211.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
gi|449508034|ref|XP_004163198.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
Length = 606
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 161/445 (36%), Positives = 264/445 (59%), Gaps = 15/445 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G E D+ +SL +MY K + + R M ++V +W +IA A + + L +
Sbjct: 162 GLEDDVYVQNSLINMYGKCRDIEMSCAIFRRMEQKSVASWSAIIAAHASLAMWWECLALF 221
Query: 61 NLMRMVG-FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
M G +R ++ V+V+S+C+ L G+ H ++K L+V V++SL+ MY +
Sbjct: 222 EDMSREGCWRAEESILVNVLSACTHLGAFHLGRCAHGSLLKNITELNVAVMTSLMDMYVK 281
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
CG L + F + + +S +I+ G HG G +A+ +F +M ++ E +DVT+VS+
Sbjct: 282 CGSLQKGLCLFQNMTRKNQLSYSVIISGLGLHGYGRQALQIFSEMVEEGLEPDDVTYVSV 341
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKA 239
L ACSH GL ++G++ FD M +YR +P ++HY C+VDL GR G L+EA L+++MP+KA
Sbjct: 342 LSACSHSGLVDEGLDLFDKMKFEYRIEPTMQHYGCMVDLKGRAGLLEEAFQLVQSMPIKA 401
Query: 240 NAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFRE 299
N ++W++LLSACK H + + AE + ++ + + Y++LSN++A A++W+ ++ R
Sbjct: 402 NDVLWRSLLSACKVHDNLKLGEIAAENLFRLSSHNPSDYLVLSNMYARAQQWENAAKIRT 461
Query: 300 AMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
M R + + PG S +E+K++V++F DKS+ +S I + ++ +++ GY+PDT
Sbjct: 462 KMINRGLIQTPGYSLVEVKSKVYKFVSQDKSYCKSGNIYKMIHQMEWQLRFEGYMPDTSQ 521
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFA--EHTRGLIVMLP------------FKYISEIKN 405
M D+D EEK LK HS+KLAIAFA ++G + + K +S I
Sbjct: 522 VMLDVDEEEKGERLKGHSQKLAIAFALIHTSQGSAIRIIRNLRMCNDCHSYTKLVSMIYE 581
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
REI VRD +RFHHF++G CSC DYW
Sbjct: 582 REITVRDRNRFHHFKDGNCSCRDYW 606
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 123/259 (47%), Gaps = 5/259 (1%)
Query: 42 TLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA 101
T+I G N E+ + YN M PD T+ V+ +C+ LA + +G QIH V K
Sbjct: 102 TMIRGYVNNMNFENAIYLYNDMLQREVEPDNFTYPVVLKACARLAVIQEGMQIHGHVFKL 161
Query: 102 GASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLF 161
G DV V +SLI+MY +C ++ S F E V WS++IAA+ E + LF
Sbjct: 162 GLEDDVYVQNSLINMYGKCRDIEMSCAIFRRMEQKSVASWSAIIAAHASLAMWWECLALF 221
Query: 162 EQMEQKE-FEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLG 220
E M ++ + A + V++L AC+H G G ++K + + T ++D+
Sbjct: 222 EDMSREGCWRAEESILVNVLSACTHLGAFHLGRCAHGSLLKNI-TELNVAVMTSLMDMYV 280
Query: 221 RCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPY 278
+CG L + L +NM K N + + ++S H A +I E++ G+ P D
Sbjct: 281 KCGSLQKGLCLFQNMTRK-NQLSYSVIISGLGLHGYGRQALQIFSEMVEEGLEPDDVTYV 339
Query: 279 VLLSNIHASAKRWQGVSEF 297
+LS S +G+ F
Sbjct: 340 SVLSACSHSGLVDEGLDLF 358
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 89/178 (50%), Gaps = 7/178 (3%)
Query: 75 FVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISM--YSRCGCLDDSVKTFLE 132
++ ++ C +L + +Q+H +++K G LD SS+++ S +D + F +
Sbjct: 35 YLCLVKKCK---SLEEFKQVHVQILKFGLFLDSFCSSSVLATCALSDWNSMDYACSIFQQ 91
Query: 133 CEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKG 192
+ +++MI Y + E AI L+ M Q+E E ++ T+ +L AC+ + ++G
Sbjct: 92 LDEPTTFDFNTMIRGYVNNMNFENAIYLYNDMLQREVEPDNFTYPVVLKACARLAVIQEG 151
Query: 193 MEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSA 250
M+ V K + + ++++ G+C ++ + A+ R M K+ A W +++A
Sbjct: 152 MQIHG-HVFKLGLEDDVYVQNSLINMYGKCRDIEMSCAIFRRMEQKSVA-SWSAIIAA 207
>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
Length = 1151
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 156/408 (38%), Positives = 247/408 (60%), Gaps = 5/408 (1%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G+ D+ ++L ++Y + G + E M +++ I L++G AQ+GL E+ L +
Sbjct: 476 GYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKVF 535
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G + + TFVS +S+ + LA + QG+QIHA V+K G S + V ++LIS+Y +C
Sbjct: 536 MRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKC 595
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +D+ F E + V W+++I + HG+G EA++LF+QM+++ + NDVTF+ +L
Sbjct: 596 GSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVL 655
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
ACSH GL E+G+ +F M +Y +PR +HY CV+D+ GR G LD A I MP+ A+
Sbjct: 656 AACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAAD 715
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
A++W+TLLSACK HK+ ++ A+ +L + P D+A YVLLSN +A ++W + R+
Sbjct: 716 AMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKM 775
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
MR+R V+KEPG SW+E+KN VH F +GD+ HP + +I +L + + GY +
Sbjct: 776 MRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQEKYHL 835
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLPFKYISEIKNREI 408
HD + E ++ HSEKLA+ F GL+ + P + IKN +
Sbjct: 836 FHDKEQEGRDPTDLVHSEKLAVTF-----GLMSLPPCMPLRVIKNLRV 878
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 161/314 (51%), Gaps = 8/314 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GFE D+ L MY K G L + +V+ ++ ++V++W ++IAG Q+ +D L +
Sbjct: 375 GFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAF 434
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G PD I S IS C+ + + QG QIHA + +G S DV + ++L+++Y+RC
Sbjct: 435 KEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARC 494
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + ++ +F E E D + + +++ + G EEA+ +F +M+Q + N TFVS L
Sbjct: 495 GRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSAL 554
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
A ++ ++G + ++K E ++ L G+CG ++A M + N
Sbjct: 555 SASANLAEIKQGKQIHARVIKT-GHSFETEVGNALISLYGKCGSFEDAKMEFSEMSER-N 612
Query: 241 AIIWKTLLSACKTH----KSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSE 296
+ W T++++C H ++ D+ ++ +E G+ P D +L+ +G+S
Sbjct: 613 EVSWNTIITSCSQHGRGLEALDLFDQMKKE--GIKPNDVTFIGVLAACSHVGLVEEGLSY 670
Query: 297 FREAMRERNVKKEP 310
F+ E ++ P
Sbjct: 671 FKSMSDEYGIRPRP 684
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 130/244 (53%), Gaps = 2/244 (0%)
Query: 7 VAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMV 66
+ G+ L +Y K+G ++ +V + R+ ++W+ +++G AQNGL E+ L Y M
Sbjct: 78 IVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRA 137
Query: 67 GFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDS 126
G P SV+SSC++ QG+ IHA+ K G ++ V +++I++Y RCG +
Sbjct: 138 GVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLA 197
Query: 127 VKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHC 186
+ F + + D V ++++I+ + G GE A+ +FE+M+ + VT SLL AC+
Sbjct: 198 ERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASL 257
Query: 187 GLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKT 246
G +KG + + K + + ++DL +CG + E A +I N + N ++W
Sbjct: 258 GDLQKGTQLHSYLFKAGISSDYIMEGS-LLDLYVKCGDV-ETALVIFNSSDRTNVVLWNL 315
Query: 247 LLSA 250
+L A
Sbjct: 316 MLVA 319
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 136/255 (53%), Gaps = 2/255 (0%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF ++ G+++ +Y++ GS E+V MP R+ + + TLI+G AQ G E L+ +
Sbjct: 173 GFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIF 232
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M+ G PD +T S++++C+ L L +G Q+H+ + KAG S D + SL+ +Y +C
Sbjct: 233 EEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKC 292
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G ++ ++ F + ++VVLW+ M+ A+G ++ LF QM+ N T+ +L
Sbjct: 293 GDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCIL 352
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
C+ + G + L VK + + ++D+ + G+L++A ++ + K +
Sbjct: 353 RTCTCTREIDLGEQIHSLSVKT-GFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEK-D 410
Query: 241 AIIWKTLLSACKTHK 255
+ W ++++ H+
Sbjct: 411 VVSWTSMIAGYVQHE 425
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 116/240 (48%), Gaps = 5/240 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAW-ITLIAGKAQNGLAEDVLDQ 59
G D + SL +Y+K G + + NV+ W + L+A N LA+ +
Sbjct: 274 GISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKS-FEL 332
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ M+ G RP++ T+ ++ +C+ + G+QIH+ VK G D+ V LI MYS+
Sbjct: 333 FCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSK 392
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
G L+ + + + DVV W+SMIA Y H ++A+ F++M++ +++ S
Sbjct: 393 YGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASA 452
Query: 180 LYACSHCGLKEKGMEFF-DLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+ C+ +G++ + V Y + + +V+L RCG + EA + M +K
Sbjct: 453 ISGCAGINAMRQGLQIHARIYVSGYSGDVSI--WNALVNLYARCGRIREAFSSFEEMELK 510
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 14/202 (6%)
Query: 81 SCSELATLGQGQ------QIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECE 134
+C+ A G G+ +IHA+ V G V + LI +YS+ G + + + F E
Sbjct: 45 ACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELS 104
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGME 194
D V W +M++ Y +G GEEA+ L+ QM + S+L +C+ L +G
Sbjct: 105 ARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRL 164
Query: 195 FFDLMVKKYRRKPRLEHY--TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACK 252
+ + Y+ E + V+ L RCG A + +MP + + + + TL+S
Sbjct: 165 ---IHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHR-DTVTFNTLISGHA 220
Query: 253 THKSTDMAGRIAEEIL--GVNP 272
+ A I EE+ G++P
Sbjct: 221 QCGHGEHALEIFEEMQFSGLSP 242
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 163/412 (39%), Positives = 243/412 (58%), Gaps = 25/412 (6%)
Query: 38 IAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAE 97
I+W +I G QN ED + M++ RPD T VSVI + ++++ Q + IH
Sbjct: 288 ISWNAMILGFTQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHGY 347
Query: 98 VVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEA 157
++ DV V+++LI MYS+CG + + + F V+ W++MI YG HG G+ A
Sbjct: 348 SIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAA 407
Query: 158 INLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVD 217
+ LFE+M+ N+ TF+S+L ACSH GL ++G ++F M K Y +P +EHY +VD
Sbjct: 408 VELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVD 467
Query: 218 LLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAP 277
LLGR G LDEA + I+NMP++ ++ +L ACK HK+ ++A A+ I + P++
Sbjct: 468 LLGRAGKLDEAWSFIKNMPIEPGISVYGAMLGACKLHKNVELAEESAQIIFELGPEEGVY 527
Query: 278 YVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEI 337
+VLL+NI+A+A W+ V+ R AM ++ ++K PG S +++KN+VH F G +H + +I
Sbjct: 528 HVLLANIYANASMWKDVARVRTAMEKKGLQKTPGWSIIQLKNEVHTFYSGSTNHQHAKDI 587
Query: 338 DLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP- 396
L +L E+K GYVPDT + +HD++ + K L HSEKLAIA+ GLI P
Sbjct: 588 YARLAKLIEEIKDMGYVPDTDS-IHDVEDDVKAQLLNTHSEKLAIAY-----GLIRTAPG 641
Query: 397 ------------------FKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
K IS + REII+RD RFHHF++GKCSCGDYW
Sbjct: 642 TTIQIKKNLRVCNDCHNATKLISLLTGREIIMRDIQRFHHFKDGKCSCGDYW 693
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 125/252 (49%), Gaps = 7/252 (2%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + +A ++LA+MY K + +V MP R+ +AW ++AG A+NGL ++
Sbjct: 46 GLASESIASTALANMYFKCRRPADARRVFDRMPSRDRVAWNAVVAGYARNGLPSSAMEA- 104
Query: 61 NLMRMVGF----RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISM 116
++RM G RPD +T VSV+ +C++ L +++HA ++AG V V ++++
Sbjct: 105 -VVRMQGEEGGERPDSVTLVSVLPACADARALHACREVHAFALRAGLDELVNVSTAVLDA 163
Query: 117 YSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTF 176
Y +CG ++ + F + V W++MI Y +G EA+ LF +M Q+ + D +
Sbjct: 164 YCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYADNGNATEAMALFWRMVQEGVDVTDASV 223
Query: 177 VSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP 236
++ L AC G ++ +L+V + + ++ +C D AA + +
Sbjct: 224 LAALQACGELGYLDEVRRVHELLV-RVGLSSNVSVTNALITTYAKCKRADLAAQVFNELG 282
Query: 237 VKANAIIWKTLL 248
K I W ++
Sbjct: 283 NKKTRISWNAMI 294
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 87/181 (48%), Gaps = 12/181 (6%)
Query: 74 TFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLEC 133
TF +++ C+ A L G+ +HA++ G + + ++L +MY +C D+ + F
Sbjct: 18 TFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRM 77
Query: 134 EYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEF--EANDVTFVSLLYACSHCGLKEK 191
D V W++++A Y +G A+ +M+ +E + VT VS+L AC+
Sbjct: 78 PSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHA 137
Query: 192 GMEFFDLMVKKYRRKPRLEHY----TCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTL 247
E V + + L+ T V+D +CG ++ A A+ MPV+ N++ W +
Sbjct: 138 CRE-----VHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVR-NSVSWNAM 191
Query: 248 L 248
+
Sbjct: 192 I 192
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 65/127 (51%), Gaps = 3/127 (2%)
Query: 2 FELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYN 61
+ D+ ++L MY K G + ++ R+VI W +I G +G + ++ +
Sbjct: 353 LDQDVYVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFE 412
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGV--ISSLISMYSR 119
M+ G P++ TF+SV+++CS + +GQ+ A +K L+ G+ +++ + R
Sbjct: 413 EMKGTGSLPNETTFLSVLAACSHAGLVDEGQKYFAS-MKKDYGLEPGMEHYGTMVDLLGR 471
Query: 120 CGCLDDS 126
G LD++
Sbjct: 472 AGKLDEA 478
>gi|449494077|ref|XP_004159440.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g34160-like [Cucumis sativus]
Length = 576
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 163/447 (36%), Positives = 265/447 (59%), Gaps = 20/447 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D++ ++L Y K G L +K+ MP ++ +W LIAG AQ D + +
Sbjct: 133 GFNADVLLQTTLLDAYAKIGDLDLAQKLFDEMPQPDIASWNALIAGFAQGSRPADAIMTF 192
Query: 61 NLMRMVG-FRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
M++ G RP+ +T + +CS+L L +G+ +H +V+ +V V + +I MY++
Sbjct: 193 KRMKVDGNLRPNAVTVQGALLACSQLGALKEGESVHKYIVEEKLDSNVQVCNVVIDMYAK 252
Query: 120 CGCLDDSVKTF--LECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
CG +D + F + C+ S ++ W++MI A+ HG G +A++LFE++ + + V+++
Sbjct: 253 CGSMDKAYWVFENMRCDKS-LITWNTMIMAFAMHGDGHKALDLFEKLGRSGMSPDAVSYL 311
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPV 237
++L AC+H GL E G++ F+ M ++ +P ++HY +VDLLGR G L EA ++ ++P
Sbjct: 312 AVLCACNHAGLVEDGLKLFNSMTQR-GLEPNIKHYGSMVDLLGRAGRLKEAYDIVSSLPF 370
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEF 297
N ++W+TLL AC+T+ +MA + +++ + +VLLSN++A+ +RW V
Sbjct: 371 P-NMVLWQTLLGACRTYGDVEMAELASRKLVEMGFISCGXFVLLSNVYAARQRWDDVGRV 429
Query: 298 REAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDT 357
R+AMR R+VKK PG S++EIK ++++F GD+SH EI L+E+ +K GY DT
Sbjct: 430 RDAMRRRDVKKTPGFSYIEIKGKMYKFVNGDQSHSSCREIYAKLDEINLRIKAYGYSADT 489
Query: 358 GADMHDMDSEEKEYNLKHHSEKLAIAFA----EHTRGLIVM----------LPFKYISEI 403
+HD+ E+KE L +HSEKLA+AF E + V+ + K IS+I
Sbjct: 490 SNVLHDIGDEDKENALCYHSEKLAVAFGLTCTEEGTPIQVIKNLRICGDCHVVIKLISKI 549
Query: 404 KNREIIVRDASRFHHFRNGKCSCGDYW 430
REIIVRD +RFH F+ G CSC DYW
Sbjct: 550 YIREIIVRDRTRFHRFKEGLCSCKDYW 576
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 129/276 (46%), Gaps = 13/276 (4%)
Query: 20 GSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVG--FRPDKITFVS 77
G L + R +P + W +I G A + + + Y M R D +T
Sbjct: 49 GDLSYALHIFRYIPYPSTNDWNAVIRGTALSSDPANAVFWYRAMAASNGLHRIDALTCSF 108
Query: 78 VISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYSD 137
+ +C+ + Q+H+++++ G + DV + ++L+ Y++ G LD + K F E D
Sbjct: 109 ALKACARALARSEAIQLHSQLLRFGFNADVLLQTTLLDAYAKIGDLDLAQKLFDEMPQPD 168
Query: 138 VVLWSSMIAAYGFHGKGEEAINLFEQME-QKEFEANDVTFVSLLYACSHCGLKEKGMEFF 196
+ W+++IA + + +AI F++M+ N VT L ACS G ++G
Sbjct: 169 IASWNALIAGFAQGSRPADAIMTFKRMKVDGNLRPNAVTVQGALLACSQLGALKEGESVH 228
Query: 197 DLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKT--- 253
+V++ + ++ V+D+ +CG +D+A + NM + I W T++ A
Sbjct: 229 KYIVEE-KLDSNVQVCNVVIDMYAKCGSMDKAYWVFENMRCDKSLITWNTMIMAFAMHGD 287
Query: 254 -HKSTDMAGRIAEEILGVNPQDAAPY--VLLSNIHA 286
HK+ D+ ++ G++P DA Y VL + HA
Sbjct: 288 GHKALDLFEKLGRS--GMSP-DAVSYLAVLCACNHA 320
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 166/451 (36%), Positives = 256/451 (56%), Gaps = 26/451 (5%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF +L ++L +Y+K G + + + ++VI+W TLI G L ++ L +
Sbjct: 265 GFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLF 324
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVK--AGASLDVGVISSLISMYS 118
M G P+ +T +S++ +C+ L + G+ IH + K G + +SLI MY+
Sbjct: 325 QEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYA 384
Query: 119 RCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVS 178
+CG ++ + + F + W++MI + HG+ A ++F +M + E E +D+TFV
Sbjct: 385 KCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVG 444
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
LL ACSH G+ + G F M + Y+ P+LEHY C++DLLG G EA +I M ++
Sbjct: 445 LLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEME 504
Query: 239 ANAIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
+ +IW +LL ACK + + ++ A+ ++ + P++ YVLLSNI+A+A RW V++ R
Sbjct: 505 PDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIR 564
Query: 299 EAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTG 358
+ ++ +KK PG S +EI + VH+F +GDK HPR+ EI LEE+ ++ G+VPDT
Sbjct: 565 ALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTS 624
Query: 359 ADMHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP-------------------FKY 399
+ +M+ E KE L+HHSEKLAIAF GLI P K
Sbjct: 625 EVLQEMEEEWKEGALRHHSEKLAIAF-----GLISTKPGTKLTIVKNLRVCRNCHEATKL 679
Query: 400 ISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
IS+I REII RD +RFHHFR+G CSC DYW
Sbjct: 680 ISKIYKREIIARDRTRFHHFRDGVCSCNDYW 710
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 155/302 (51%), Gaps = 5/302 (1%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+V+ ++L Y G + +K+ +PI++V++W +I+G A+ G ++ L+ + M
Sbjct: 168 DVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMM 227
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLD 124
RPD+ T VSV+S+C++ A++ G+Q+H+ + G ++ ++++LI +Y +CG ++
Sbjct: 228 KTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVE 287
Query: 125 DSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
+ F Y DV+ W+++I Y +EA+ LF++M + NDVT +S+L AC+
Sbjct: 288 TACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACA 347
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRL-EHYTCVVDLLGRCGYLDEAAALIRNMPVKANAII 243
H G E G + K+ + H T ++D+ +CG + EAA + + + +
Sbjct: 348 HLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDI-EAAQQVFDSILNRSLSS 406
Query: 244 WKTLLSACKTHKSTDMAGRIAEEILG--VNPQDAAPYVLLSNIHASAKRWQGVSEFREAM 301
W ++ H + A I + + P D LLS S G FR +M
Sbjct: 407 WNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFR-SM 465
Query: 302 RE 303
+E
Sbjct: 466 KE 467
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 124/279 (44%), Gaps = 35/279 (12%)
Query: 36 NVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIH 95
N++ W T+ G A + L Y M +G P+ TF ++ SC++ +GQQIH
Sbjct: 67 NLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIH 126
Query: 96 AEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY-------------------- 135
V+K G LD+ V +SLISMY + G L+D+ K F + +
Sbjct: 127 GHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIA 186
Query: 136 -----------SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACS 184
DVV W++MI+ Y G +EA+ LF++M + ++ T VS++ AC+
Sbjct: 187 SAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACA 246
Query: 185 HCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIW 244
E G + + + L+ ++DL +CG ++ A L + K + I W
Sbjct: 247 QSASIELGRQVHS-WIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYK-DVISW 304
Query: 245 KTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLL 281
TL+ A + +E+L G +P D +L
Sbjct: 305 NTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSIL 343
>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 161/413 (38%), Positives = 239/413 (57%), Gaps = 17/413 (4%)
Query: 35 RNVIAWITLIAGKAQNGLAEDVLDQYNLM--RMVGFRPDKITFVSVISSCSELATLGQGQ 92
R+V+ W +I G +Q+G A L+ + M RP+ T + +C+ LA L G+
Sbjct: 438 RDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGK 497
Query: 93 QIHAEVVKAGA-SLDVGVISSLISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFH 151
QIHA ++ ++ + V + LI MY++CG + D+ F + V W+S++ YG H
Sbjct: 498 QIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMH 557
Query: 152 GKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEH 211
G GEEA+ +FE+M + F+ + VT + +LYACSH G+ ++GME+F+ M + P EH
Sbjct: 558 GYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVSPGPEH 617
Query: 212 YTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEILGVN 271
Y C+VDLLGR G L+ A LI MP++ ++W LLS C+ H ++ A++I +
Sbjct: 618 YACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCCRIHGKVELGEYAAKKITELA 677
Query: 272 PQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSH 331
+ Y LLSN++A+A RW+ V+ R MR + +KK PG SW+E F +GDK+H
Sbjct: 678 SNNDGSYTLLSNMYANAGRWKDVTRIRSLMRHKGIKKRPGCSWVEGIKGTTTFFVGDKTH 737
Query: 332 PRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKHHSEKLAIAFA------ 385
P + EI L + +K GYVP+TG +HD+D EEK+ L HSEKLA+A+
Sbjct: 738 PHAKEIYQVLSDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQ 797
Query: 386 ----EHTRGLIVM----LPFKYISEIKNREIIVRDASRFHHFRNGKCSCGDYW 430
T+ L V F Y+S I + EII+RD+SRFHHF+NG CSC YW
Sbjct: 798 GAAIRITKNLRVCGDCHTAFTYMSRIIDHEIILRDSSRFHHFKNGLCSCKGYW 850
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 131/267 (49%), Gaps = 5/267 (1%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRN--VIAWITLIAGKAQNGLAEDVLDQYN 61
L L S L Y+ G L ++R P + V W +LI NG A L +
Sbjct: 57 LTLNLTSHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGNNGRANKCLSSFC 116
Query: 62 LMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCG 121
LM + + PD TF V +C E++++ G HA G +V V ++L++MYSRCG
Sbjct: 117 LMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCG 176
Query: 122 CLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQK-EFEANDVTFVSLL 180
L D+ K F E DVV W+S+I +Y GK + A+ +F +M + F +D+T V++L
Sbjct: 177 SLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVL 236
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
C+ G + G +F V + C+VD+ + G +DEA + NMPVK +
Sbjct: 237 PPCASVGTRSLGKQFHGFAVTSEMIQNMFVG-NCLVDMYAKFGMMDEANTVFSNMPVK-D 294
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEI 267
+ W +++ + A R+ E++
Sbjct: 295 VVSWNAMVAGYSQIGRFEDAVRLFEQM 321
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 146/311 (46%), Gaps = 43/311 (13%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF ++ G++L MY + GSL + KV MP+ +V++W ++I A+ G + L+ +
Sbjct: 157 GFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMF 216
Query: 61 NLM-RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ M GFRPD IT V+V+ C+ + T G+Q H V + ++ V + L+ MY++
Sbjct: 217 SKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAK 276
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKE----------- 168
G +D++ F DVV W++M+A Y G+ E+A+ LFEQM++++
Sbjct: 277 FGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAA 336
Query: 169 ----------FEA--------------NDVTFVSLLYACSHCGLKEKGMEFFDLMVK--- 201
+EA N+VT +S+L C+ G G E +K
Sbjct: 337 ISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPM 396
Query: 202 KYRRKPRLEHYTCV---VDLLGRCGYLDEAAALIRNM-PVKANAIIWKTLLSACKTHKST 257
R+ + + +D+ +C +D A A+ ++ P + + + W ++ H
Sbjct: 397 DLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDA 456
Query: 258 DMAGRIAEEIL 268
+ A + E+
Sbjct: 457 NKALELLSEMF 467
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 147/354 (41%), Gaps = 49/354 (13%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
++ G+ L MY K G + E V MP+++V++W ++AG +Q G ED + + M+
Sbjct: 263 NMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQ 322
Query: 65 -----------------------------------MVGFRPDKITFVSVISSCSELATLG 89
G +P+++T +SV+S C+ + L
Sbjct: 323 EEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALM 382
Query: 90 QGQQIHAEVVKAGASLDVG-------VISSLISMYSRCGCLDDSVKTF--LECEYSDVVL 140
G++IH +K L VI+ LI MY++C +D + F L + DVV
Sbjct: 383 HGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVT 442
Query: 141 WSSMIAAYGFHGKGEEAINLFEQM--EQKEFEANDVTFVSLLYACSHCGLKEKGMEFFDL 198
W+ MI Y HG +A+ L +M E + N T L AC+ G +
Sbjct: 443 WTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAY 502
Query: 199 MVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTD 258
++ + L C++D+ +CG + +A + NM ++ N + W +L++ H +
Sbjct: 503 ALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNM-MEKNEVTWTSLMTGYGMHGYGE 561
Query: 259 MAGRIAEEI--LGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEP 310
A I EE+ +G V+L S QG+ F + V P
Sbjct: 562 EALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVSPGP 615
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 84/184 (45%), Gaps = 7/184 (3%)
Query: 4 LDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLM 63
+ L + L MY K G + + V M +N + W +L+ G +G E+ L + M
Sbjct: 511 VPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEEM 570
Query: 64 RMVGFRPDKITFVSVISSCSELATLGQGQQIHAEV-VKAGASLDVGVISSLISMYSRCGC 122
R +GF+ D +T + V+ +CS + QG + + G S + L+ + R G
Sbjct: 571 RRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVSPGPEHYACLVDLLGRAGR 630
Query: 123 LDDSVKTFLECEY-SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEAND---VTFVS 178
L+ +++ E V+W ++++ HGK E + + + E +N+ T +S
Sbjct: 631 LNAALRLIEEMPMEPPPVVWVALLSCCRIHGKVE--LGEYAAKKITELASNNDGSYTLLS 688
Query: 179 LLYA 182
+YA
Sbjct: 689 NMYA 692
>gi|224088870|ref|XP_002308572.1| predicted protein [Populus trichocarpa]
gi|222854548|gb|EEE92095.1| predicted protein [Populus trichocarpa]
Length = 433
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 156/434 (35%), Positives = 244/434 (56%), Gaps = 24/434 (5%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
+ + G + +K+ MP R+VI+W T++ NG + L+ + MR G PD+ T
Sbjct: 5 FARDGQVSVVQKLFDEMPERDVISWNTMLMAYVHNGKLGEALECFKRMRESGLVPDEATL 64
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEY 135
V+++S+ ++L L GQ IH+ + + + + ++L+ MY++CGC++ S F
Sbjct: 65 VTMLSASAQLCLLEHGQSIHSIIDSLSLPMTISIGTALLDMYAKCGCIEQSRLLFENMPR 124
Query: 136 SDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGMEF 195
DV W+ MI HG G++A+ LFE+ + +VTFV +L ACS GL ++G +
Sbjct: 125 RDVSTWNVMICGLASHGLGKDALTLFERFLNEGLHPMNVTFVGVLNACSRAGLVKEGRHY 184
Query: 196 FDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTHK 255
F +M Y +P +EHY C+VDLLGR G + EA +I +M + + ++W +L AC+ H
Sbjct: 185 FQMMTDSYGIEPEMEHYGCMVDLLGRAGLVFEAIKVIESMAISPDPVLWAMVLCACRIHG 244
Query: 256 STDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSWL 315
++ +I ++ ++P YV L++I+A++++W+ V R M ERN K G S +
Sbjct: 245 LAELGEKIGNRLIELDPTYDGHYVQLASIYANSRKWEDVVRVRRLMAERNTSKVAGWSLI 304
Query: 316 EIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEEKEYNLKH 375
E + +VH+F G + H +S+EI LE + + + GYVP+ +HD+ EEKE +K
Sbjct: 305 EARGKVHRFVAGHREHEQSLEIQKMLEIIETRLAAAGYVPNVSPVLHDIGEEEKENAIKV 364
Query: 376 HSEKLAIAFAEHTRGLIVMLP-------------------FKYISEIKNREIIVRDASRF 416
HSE+LAIAF GL+V P K IS + REIIVRD SRF
Sbjct: 365 HSERLAIAF-----GLLVTGPGSCIRIVKNLRVCWDCHEVTKMISRVFEREIIVRDGSRF 419
Query: 417 HHFRNGKCSCGDYW 430
HHF+ GKCSC DYW
Sbjct: 420 HHFKEGKCSCLDYW 433
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 2/149 (1%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
G++L MY K G + + + MP R+V W +I G A +GL +D L + G
Sbjct: 99 GTALLDMYAKCGCIEQSRLLFENMPRRDVSTWNVMICGLASHGLGKDALTLFERFLNEGL 158
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSRCGCLDDSV 127
P +TFV V+++CS + +G+ + + G ++ ++ + R G + +++
Sbjct: 159 HPMNVTFVGVLNACSRAGLVKEGRHYFQMMTDSYGIEPEMEHYGCMVDLLGRAGLVFEAI 218
Query: 128 KTFLECEYS-DVVLWSSMIAAYGFHGKGE 155
K S D VLW+ ++ A HG E
Sbjct: 219 KVIESMAISPDPVLWAMVLCACRIHGLAE 247
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 79/166 (47%), Gaps = 4/166 (2%)
Query: 113 LISMYSRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEAN 172
+++ ++R G + K F E DV+ W++M+ AY +GK EA+ F++M + +
Sbjct: 1 MLAGFARDGQVSVVQKLFDEMPERDVISWNTMLMAYVHNGKLGEALECFKRMRESGLVPD 60
Query: 173 DVTFVSLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALI 232
+ T V++L A + L E G + + + T ++D+ +CG ++++ L
Sbjct: 61 EATLVTMLSASAQLCLLEHGQSIHSI-IDSLSLPMTISIGTALLDMYAKCGCIEQSRLLF 119
Query: 233 RNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAA 276
NMP + + W ++ +H A + E L G++P +
Sbjct: 120 ENMP-RRDVSTWNVMICGLASHGLGKDALTLFERFLNEGLHPMNVT 164
>gi|449510831|ref|XP_004163774.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 556
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 175/442 (39%), Positives = 251/442 (56%), Gaps = 27/442 (6%)
Query: 9 GSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGF 68
+SL+ MY K G + K+ R+V+ W +I N ED + + +MR G
Sbjct: 122 NNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGS 181
Query: 69 RPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVK 128
PD+ ++ SV+ SC+ LA L QG IH +++++G ++ V SSLI+MY++CG L D+ +
Sbjct: 182 IPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQ 241
Query: 129 TFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGL 188
F E E +VV W+++IAA HG + LFEQM ++ + + +TFVS+L ACSH G
Sbjct: 242 IFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHTGR 301
Query: 189 KEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLL 248
E+G +F+ M+K + P EHY C+VDLL R G LD A I MP+K +A +W LL
Sbjct: 302 VEEGFFYFNSMIKVHGIYPGHEHYACIVDLLSRAGELDRAKRFIELMPIKPDASVWGALL 361
Query: 249 SACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKK 308
SAC+ H + M +A ++ + P + YVLL NI E R M V+K
Sbjct: 362 SACRNHSNLIMGKEVALKLFDLEPDNPGNYVLLCNILTRNGMLNEADEVRRKMESIGVRK 421
Query: 309 EPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDSEE 368
EPG SW++IKN + FT+ DKSH ++ EI LE+L +K +GYV +T ++ + E
Sbjct: 422 EPGCSWIDIKNSTYVFTVHDKSHEKTKEIYEMLEKLKELVKKKGYVAETEFAINTAE-EY 480
Query: 369 KEYNLKHHSEKLAIAFAEHTRGLIVMLP--------------------FKYISEIKNREI 408
KE +L +HSEK+A+AF ++ LP K+ SEI REI
Sbjct: 481 KEQSLWYHSEKIALAFG------LLSLPAGAPIRIKKNLRTCGDCHTVMKFASEIFAREI 534
Query: 409 IVRDASRFHHFRNGKCSCGDYW 430
IVRD +RFHHF NG CSCGDYW
Sbjct: 535 IVRDINRFHHFTNGICSCGDYW 556
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 138/313 (44%), Gaps = 33/313 (10%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF ++ S+L MY K ++ EKV MP L
Sbjct: 40 GFLAEVFVVSALVDMYAKCCDMLMAEKVFEEMP----------------------TLLLE 77
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
NL + D+++F SV S+C+ L G+Q+H +K G V + +SL MY +C
Sbjct: 78 NLTAL-----DEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKC 132
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G +D K F DVV W+ MI AY ++ E+A N F M +K ++ ++ S+L
Sbjct: 133 GLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVL 192
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
++C++ +G + +++ K L + ++ + +CG L +A + + N
Sbjct: 193 HSCANLAALYQGTLIHNQIIRSGFVK-NLRVASSLITMYAKCGSLVDAFQIFEETEDR-N 250
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEIL--GVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
+ W +++AC+ H + + E++L G+ P +LS + + +G F
Sbjct: 251 VVCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFN 310
Query: 299 EAMRERNVKKEPG 311
++ + PG
Sbjct: 311 SMIKVHGIY--PG 321
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 85/169 (50%), Gaps = 8/169 (4%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF +L SSL MY K GSLV+ ++ RNV+ W +IA Q+G A V++ +
Sbjct: 215 GFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVELF 274
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKA-GASLDVGVISSLISMYSR 119
M G +PD ITFVSV+S+CS + +G ++K G + ++ + SR
Sbjct: 275 EQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYACIVDLLSR 334
Query: 120 CGCLDDSVKTFLECE--YSDVVLWSSMIAAYGFHGK----GEEAINLFE 162
G LD + K F+E D +W ++++A H E A+ LF+
Sbjct: 335 AGELDRA-KRFIELMPIKPDASVWGALLSACRNHSNLIMGKEVALKLFD 382
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 87/192 (45%), Gaps = 37/192 (19%)
Query: 63 MRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGC 122
MR G P+ TF +V+S+C++ G+Q+H+ V K G +V V+S+L+ MY++C
Sbjct: 1 MRRSGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKC-- 58
Query: 123 LDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEA----NDVTFVS 178
D+++ A +FE+M E ++V+F S
Sbjct: 59 -------------CDMLM----------------AEKVFEEMPTLLLENLTALDEVSFSS 89
Query: 179 LLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVK 238
+ AC++ G E G + + +K + + + D+ G+CG ++ A L N +
Sbjct: 90 VFSACANAGNLEFGKQVHGVALKLGVWNLVYINNS-LSDMYGKCGLFNDVAKLFSNTGAR 148
Query: 239 ANAIIWKTLLSA 250
+ + W ++ A
Sbjct: 149 -DVVTWNIMIMA 159
>gi|359479564|ref|XP_002274514.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 616
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 167/445 (37%), Positives = 262/445 (58%), Gaps = 21/445 (4%)
Query: 5 DLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMR 64
D+V+ +S+ Y+K+G + +KV M ++V+ W ++I+ QN LD + M
Sbjct: 174 DVVSWNSMIAGYLKAGEIELAKKVFETMSDKDVVTWTSMISAYVQNRCPMKALDLFREML 233
Query: 65 MVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVI-SSLISMYSRCGCL 123
+G RPD VSV+S+ ++L + +G+ +HA V L G I S+LI MYS+CG +
Sbjct: 234 SLGLRPDGPAIVSVLSAIADLGFVEEGKWLHAYVSMNKIELSSGFIGSALIDMYSKCGYI 293
Query: 124 DDSVKTFLECEYS-DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYA 182
+++ F + ++ W+SMI+ HG EA+++F +ME+ + E N++TF+ LL
Sbjct: 294 ENAYHVFRSISHRRNIGDWNSMISGLAIHGLAREALDIFVEMERMDIEPNEITFLGLLST 353
Query: 183 CSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAI 242
CSH GL E+G +F+ M +KY+ PR++HY C++DL GR G L++A +I+NMP +A+ +
Sbjct: 354 CSHGGLVEEGQFYFESMHEKYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQNMPFEADLL 413
Query: 243 IWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMR 302
WK +LSA H ++ A + + P D++ YVLLSNI+A A RW V++ R MR
Sbjct: 414 AWKAILSASMKHGHIEIGKSAALRAIELAPDDSSSYVLLSNIYAKAGRWDDVAKIRLMMR 473
Query: 303 ERNVKKEPGVSWLEIKNQVHQFTMG---DKSHPRSMEIDLYLEELTSEMKLRGYVPDTGA 359
+R VKK G S + + +VH+F +G D S+ S ++ + E+ S +KL+GY PD
Sbjct: 474 QRGVKKIAGCSSMLVNGKVHEFLLGKELDSSY--SGQVLAKIAEVVSRLKLQGYEPDLTQ 531
Query: 360 DMHDMDSEEKEYNLKHHSEKLAIAFA----------EHTRGLIVMLP----FKYISEIKN 405
+ D++ E KE L HSEK+AIAF + L V K +S++ N
Sbjct: 532 VLLDIEDEGKESLLNLHSEKMAIAFGLIHINKSAPIHIVKNLRVCCDCHCFMKLVSKVYN 591
Query: 406 REIIVRDASRFHHFRNGKCSCGDYW 430
R+II+RD +RFHHF NG CSC +YW
Sbjct: 592 RQIIMRDQNRFHHFENGCCSCNEYW 616
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 114/265 (43%), Gaps = 42/265 (15%)
Query: 77 SVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLECEYS 136
SV+ +C +L +G+Q+H +V+K D V +S++ MY G ++ + + F
Sbjct: 114 SVLKACGKLLAFDEGRQVHGQVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNR 173
Query: 137 DVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL--YACSHC-------- 186
DVV W+SMIA Y G+ E A +FE M K+ VT+ S++ Y + C
Sbjct: 174 DVVSWNSMIAGYLKAGEIELAKKVFETMSDKDV----VTWTSMISAYVQNRCPMKALDLF 229
Query: 187 ------GLKEKGMEFFDLM--------------VKKYRRKPRLEHY-----TCVVDLLGR 221
GL+ G ++ + Y ++E + ++D+ +
Sbjct: 230 REMLSLGLRPDGPAIVSVLSAIADLGFVEEGKWLHAYVSMNKIELSSGFIGSALIDMYSK 289
Query: 222 CGYLDEAAALIRNMPVKANAIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYV 279
CGY++ A + R++ + N W +++S H A I E+ + + P +
Sbjct: 290 CGYIENAYHVFRSISHRRNIGDWNSMISGLAIHGLAREALDIFVEMERMDIEPNEITFLG 349
Query: 280 LLSNIHASAKRWQGVSEFREAMRER 304
LLS +G F E+M E+
Sbjct: 350 LLSTCSHGGLVEEGQFYF-ESMHEK 373
>gi|449441075|ref|XP_004138309.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 161/444 (36%), Positives = 248/444 (55%), Gaps = 14/444 (3%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
GF D+ ++L H+Y S+ + ++ MP RN + W LI G N +D +
Sbjct: 119 GFICDVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAIDAF 178
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
M G +P + T V V+S+CS L QG+ IH + L+V V ++LI MY++C
Sbjct: 179 RGMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAKC 238
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G + + K F E +V W+ +I+ Y +G+G+ A+ F +M + F+ ++VTF+ +L
Sbjct: 239 GAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLGVL 298
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC H GL +G F M +++ +PR+EHY C+VDLLGR G L+EA LI++M ++ +
Sbjct: 299 CACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSIEPD 358
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREA 300
IIW+ LL AC+ H +T + I + ++ + P + YVLLSNI++ +RW V + R
Sbjct: 359 PIIWRALLCACRVHGNTKLGEYIIKRLIELEPNNGENYVLLSNIYSRERRWAEVGKLRGM 418
Query: 301 MRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLRGYVPDTGAD 360
M R ++K PG S +EI N V++F + P I L+ L ++K GYV T
Sbjct: 419 MNLRGIRKVPGCSSIEINNVVYEFVASNDRKPEFEAIYKQLDNLIKKLKENGYVTGTDMA 478
Query: 361 MHDMDSEEKEYNLKHHSEKLAIAFAEHTRGLIVMLP--------------FKYISEIKNR 406
++D++ EEKE+++ +HSEKLA+AF L L FK +S + R
Sbjct: 479 LYDIEKEEKEHSVMYHSEKLALAFGLLNSPLDCTLRIVKNLRICLDCHEFFKVLSLVYKR 538
Query: 407 EIIVRDASRFHHFRNGKCSCGDYW 430
I+VRD +RFHHF G CSC DYW
Sbjct: 539 YIVVRDRNRFHHFYEGFCSCRDYW 562
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 112/244 (45%), Gaps = 12/244 (4%)
Query: 60 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 119
+ LM PD TF +V+ + ++L G G+ IH V++ G DV ++L+ +Y
Sbjct: 77 FALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQMGFICDVYTSTALVHLYCT 136
Query: 120 CGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSL 179
C + D+ + F E + V W+++I Y + K +AI+ F M + ++ T V +
Sbjct: 137 CLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAIDAFRGMLADGAQPSERTVVVV 196
Query: 180 LYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHY--TCVVDLLGRCGYLDEAAALIRNMPV 237
L ACSH G +G + + Y + RL + T ++D+ +CG + E + +
Sbjct: 197 LSACSHLGAFNQGKWIHEFI---YHNRLRLNVFVGTALIDMYAKCGAVYEVEKVFEEIRE 253
Query: 238 KANAIIWKTLLSACKTHKSTDMAGRIAEEILGVN-PQDAAPY--VLLSNIH---ASAKRW 291
K N W L+S + D A + +L N D + VL + H + RW
Sbjct: 254 K-NVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLGVLCACCHQGLVTEGRW 312
Query: 292 QGVS 295
Q +S
Sbjct: 313 QFMS 316
>gi|224131508|ref|XP_002328557.1| predicted protein [Populus trichocarpa]
gi|222838272|gb|EEE76637.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 159/431 (36%), Positives = 252/431 (58%), Gaps = 16/431 (3%)
Query: 16 YMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQYNLMRMVGFRPDKITF 75
Y K+G L ++ MP+++ ++W T+I G A NG E+ + ++ G RP++ +
Sbjct: 213 YTKAGELELAREMFLEMPMKDDVSWSTMIVGFAHNGYFEEAFSFFRELQRKGMRPNETSL 272
Query: 76 VSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRCGCLDDSVKTFLEC-E 134
V+S+C++ L G+ +H + K+G + V V ++L+ YS+CG + + F
Sbjct: 273 TGVLSACAQAGALEFGKILHGFIEKSGLAWIVSVNNALLDTYSKCGNVLMAQLVFERIMN 332
Query: 135 YSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYACSHCGLKEKGME 194
++V W+SM+AA HG GEEAI +F +ME+ +++ F+SLLYACSH GL E+G E
Sbjct: 333 ERNIVSWTSMMAALAMHGHGEEAIGIFHKMEESGIRPDEIAFISLLYACSHAGLVEQGCE 392
Query: 195 FFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKANAIIWKTLLSACKTH 254
+FD M Y +P +EHY C+VDL GR G L +A + MP+ AIIW+TLL AC H
Sbjct: 393 YFDKMKGMYNIEPSIEHYGCMVDLYGRAGQLQKAYEFVCQMPIPCTAIIWRTLLGACSMH 452
Query: 255 KSTDMAGRIAEEILGVNPQDAAPYVLLSNIHASAKRWQGVSEFREAMRERNVKKEPGVSW 314
+A ++ E + ++P +++ +VLLSN +A A +W+ + R +M E+ + K PG S
Sbjct: 453 GDVKLAEQVKERLSELDPNNSSDHVLLSNAYAVAGKWKDAASVRRSMTEQRITKTPGWSM 512
Query: 315 LEIKNQVHQFTMGDKSHPRSMEIDLYLEELTSEMKLR-GYVPDTGADMHDMDSEEKEYNL 373
+E+ ++ F G K + + E L+E+ +++ GYVP+ G +HD++ EEKE ++
Sbjct: 513 IEVDKIMYTFLAGTKQYKITEEAYKKLKEIIRRLRVEGGYVPEIGRVLHDIEEEEKEGSV 572
Query: 374 KHHSEKLAIAF--AEHTRGLIVML------------PFKYISEIKNREIIVRDASRFHHF 419
HSEKLA+AF A +G + + K IS+I EI+VRD SRFH F
Sbjct: 573 SVHSEKLAVAFGIARLCKGRTIRIVKNLRICRDCHAVMKLISQIYKVEIVVRDRSRFHSF 632
Query: 420 RNGKCSCGDYW 430
++G CSC DYW
Sbjct: 633 KDGYCSCRDYW 643
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 127/314 (40%), Gaps = 44/314 (14%)
Query: 1 GFELDLVAGSSLAHMYMKSGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLDQY 60
G + L G++L MY + G + KV MP N IAW ++ + G + + +
Sbjct: 136 GLDTHLFVGTTLISMYGECGFVGFARKVFDEMPEPNAIAWNAMVTACCRGGDMKGGRELF 195
Query: 61 NLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSRC 120
+LM V+ S +V +++ Y++
Sbjct: 196 DLMP----------------------------------VRNLMSWNV-----MLAGYTKA 216
Query: 121 GCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLL 180
G L+ + + FLE D V WS+MI + +G EEA + F ++++K N+ + +L
Sbjct: 217 GELELAREMFLEMPMKDDVSWSTMIVGFAHNGYFEEAFSFFRELQRKGMRPNETSLTGVL 276
Query: 181 YACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMPVKAN 240
AC+ G E G + ++K + ++D +CG + A + + + N
Sbjct: 277 SACAQAGALEFG-KILHGFIEKSGLAWIVSVNNALLDTYSKCGNVLMAQLVFERIMNERN 335
Query: 241 AIIWKTLLSACKTHKSTDMAGRIAEEI--LGVNPQDAAPYVLLSNIHASAKRWQGVSEFR 298
+ W ++++A H + A I ++ G+ P + A LL + QG F
Sbjct: 336 IVSWTSMMAALAMHGHGEEAIGIFHKMEESGIRPDEIAFISLLYACSHAGLVEQGCEYFD 395
Query: 299 EAMRERNVKKEPGV 312
+ N+ EP +
Sbjct: 396 KMKGMYNI--EPSI 407
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 114/257 (44%), Gaps = 15/257 (5%)
Query: 1 GFELD-LVAGSSLAHMYMK-SGSLVEGEKVIRLMPIRNVIAWITLIAGKAQNGLAEDVLD 58
G E D +AG L H + S SL ++ R P +V TLI G ++ +D L
Sbjct: 32 GLESDPFIAGKLLHHCAISLSDSLDYACRLFRYTPNPDVFMHNTLIRGLYESDRPQDSLL 91
Query: 59 QYNLMRMVGFRP-DKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMY 117
++ MR F P D +F ++ + + L ++ G Q+H + + G + V ++LISMY
Sbjct: 92 KFIEMRRNSFSPPDSFSFAFIVKAAANLRSVRVGIQLHCQALVHGLDTHLFVGTTLISMY 151
Query: 118 SRCGCLDDSVKTFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFV 177
CG + + K F E + + W++M+ A G + LF+ M + N +++
Sbjct: 152 GECGFVGFARKVFDEMPEPNAIAWNAMVTACCRGGDMKGGRELFDLMPVR----NLMSWN 207
Query: 178 SLLYACSHCGLKEKGMEFFDLMVKKYRRKPRLEHYTCVVDLLGRCGYLDEAAALIRNMP- 236
+L + G E E F M K ++ ++ GY +EA + R +
Sbjct: 208 VMLAGYTKAGELELAREMFLEMPMKDDVS-----WSTMIVGFAHNGYFEEAFSFFRELQR 262
Query: 237 --VKANAIIWKTLLSAC 251
++ N +LSAC
Sbjct: 263 KGMRPNETSLTGVLSAC 279
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.135 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,550,870,772
Number of Sequences: 23463169
Number of extensions: 261639329
Number of successful extensions: 685828
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7838
Number of HSP's successfully gapped in prelim test: 2880
Number of HSP's that attempted gapping in prelim test: 594759
Number of HSP's gapped (non-prelim): 43542
length of query: 430
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 285
effective length of database: 8,957,035,862
effective search space: 2552755220670
effective search space used: 2552755220670
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 78 (34.7 bits)