BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043371
(271 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE
PHOSPHATASE 2C AT 2 A Resolution
Length = 382
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 91/242 (37%), Gaps = 47/242 (19%)
Query: 76 IELW-FFGVFDAQVGDSVARFMQSHFFDRKLKPSQIR--------RKSKDTLKKAYLXXX 126
+E W FF V+D G VA++ H D + K+ ++ +L
Sbjct: 50 LESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEID 109
Query: 127 XXXXXXXXXXEKW-RAGSASV-MVINGEKLVIANMGEYRAVVCRDGVAHQISSGRQHTAK 184
R+GS +V ++I+ + N G+ R ++CR+ H + + +
Sbjct: 110 EHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNP 169
Query: 185 RHWSRKLFSGTK------------------------HSKG-SELAVGAE-------KIDS 212
R +G H KG +E V E + +
Sbjct: 170 LEKERIQNAGGSVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEE 229
Query: 213 DTEFVLIASTGIWEVMKNQEAVSLIRH----IGDAQEAAECLAKEALTRMSRSNISCVVV 268
D +F+++A GIW+VM N+E +R D ++ + L + SR N+S +++
Sbjct: 230 DDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVILI 289
Query: 269 RF 270
F
Sbjct: 290 CF 291
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 3 Mm Of Mn2+
pdb|3FXK|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 10 Mm Of Mn2+
pdb|3FXL|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 1 Mm Of Mn2+
pdb|3FXM|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 10 Mm Of Mn2+
pdb|3FXO|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 1 Mm Of Mn2+
Length = 390
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 91/242 (37%), Gaps = 47/242 (19%)
Query: 76 IELW-FFGVFDAQVGDSVARFMQSHFFDRKLKPSQIR--------RKSKDTLKKAYLXXX 126
+E W FF V+D G VA++ H D + K+ ++ +L
Sbjct: 50 LESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEID 109
Query: 127 XXXXXXXXXXEKW-RAGSASV-MVINGEKLVIANMGEYRAVVCRDGVAHQISSGRQHTAK 184
R+GS +V ++I+ + N G+ R ++CR+ H + + +
Sbjct: 110 EHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNP 169
Query: 185 RHWSRKLFSGTK------------------------HSKG-SELAVGAE-------KIDS 212
R +G H KG +E V E + +
Sbjct: 170 LEKERIQNAGGSVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEE 229
Query: 213 DTEFVLIASTGIWEVMKNQEAVSLIRH----IGDAQEAAECLAKEALTRMSRSNISCVVV 268
D +F+++A GIW+VM N+E +R D ++ + L + SR N+S +++
Sbjct: 230 DDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVILI 289
Query: 269 RF 270
F
Sbjct: 290 CF 291
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With
Abi1
Length = 326
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 99/252 (39%), Gaps = 66/252 (26%)
Query: 80 FFGVFDAQVGDSVARFMQSHFFDRKLKPSQIRRKSKDTL----------KKAYLXXXXXX 129
FFGV+D G VA + + L ++ K K L KKA
Sbjct: 69 FFGVYDGHGGSQVANYCRERM---HLALAEEIAKEKPMLCDGDTWLEKWKKALFNSFLRV 125
Query: 130 XXXXXXXEKWRAGSASVM-VINGEKLVIANMGEYRAVVCRDGVAHQIS----SGRQHTAK 184
GS SV+ V+ + +AN G+ RAV+CR A +S R+ A
Sbjct: 126 DSEIESVAPETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAA 185
Query: 185 R---------HWS-RKLFS--------GTKHSKGSELA---VGAEKIDSDTEFVLIASTG 223
R W+ ++F G ++ K S + V A K + + +++AS G
Sbjct: 186 RIEAAGGKVIQWNGARVFGVLAMSRSIGDRYLKPSIIPDPEVTAVKRVKEDDCLILASDG 245
Query: 224 IWEVMKNQEAVSLIRH-----------IGDAQ----------------EAAECLAKEALT 256
+W+VM ++EA + R GDA AAE L+K A+
Sbjct: 246 VWDVMTDEEACEMARKRILLWHKKNAVAGDASLLADERRKEGKDPAAMSAAEYLSKLAIQ 305
Query: 257 RMSRSNISCVVV 268
R S+ NIS VVV
Sbjct: 306 RGSKDNISVVVV 317
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
pdb|3NMN|D Chain D, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
Length = 319
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 99/252 (39%), Gaps = 66/252 (26%)
Query: 80 FFGVFDAQVGDSVARFMQSHFFDRKLKPSQIRRKSKDTL----------KKAYLXXXXXX 129
FFGV+D G VA + + L ++ K K L KKA
Sbjct: 57 FFGVYDGHGGSQVANYCRERM---HLALAEEIAKEKPMLCDGDTWLEKWKKALFNSFLRV 113
Query: 130 XXXXXXXEKWRAGSASVM-VINGEKLVIANMGEYRAVVCRDGVAHQIS----SGRQHTAK 184
GS SV+ V+ + +AN G+ RAV+CR A +S R+ A
Sbjct: 114 DSEIESVAPETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAA 173
Query: 185 R---------HWS-RKLFS--------GTKHSKGSELA---VGAEKIDSDTEFVLIASTG 223
R W+ ++F G ++ K S + V A K + + +++AS G
Sbjct: 174 RIEAAGGKVIQWNGARVFGVLAMSRSIGDRYLKPSIIPDPEVTAVKRVKEDDCLILASDG 233
Query: 224 IWEVMKNQEAVSLIRH-----------IGDAQ----------------EAAECLAKEALT 256
+W+VM ++EA + R GDA AAE L+K A+
Sbjct: 234 VWDVMTDEEACEMARKRILLWHKKNAVAGDASLLADERRKEGKDPAAMSAAEYLSKLAIQ 293
Query: 257 RMSRSNISCVVV 268
R S+ NIS VVV
Sbjct: 294 RGSKDNISVVVV 305
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1
Length = 316
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 99/252 (39%), Gaps = 66/252 (26%)
Query: 80 FFGVFDAQVGDSVARFMQSHFFDRKLKPSQIRRKSKDTL----------KKAYLXXXXXX 129
FFGV+D G VA + + L ++ K K L KKA
Sbjct: 54 FFGVYDGHGGSQVANYCRERM---HLALAEEIAKEKPMLSDGDTWLEKWKKALFNSFLRV 110
Query: 130 XXXXXXXEKWRAGSASVM-VINGEKLVIANMGEYRAVVCRDGVAHQIS----SGRQHTAK 184
GS SV+ V+ + +AN G+ RAV+CR A +S R+ A
Sbjct: 111 DSEIESVAPETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAA 170
Query: 185 R---------HWS-RKLFS--------GTKHSKGSELA---VGAEKIDSDTEFVLIASTG 223
R W+ ++F G ++ K S + V A K + + +++AS G
Sbjct: 171 RIEAAGGKVIQWNGARVFGVLAMSRSIGDRYLKPSIIPDPEVTAVKRVKEDDCLILASDG 230
Query: 224 IWEVMKNQEAVSLIRH-----------------IGD----------AQEAAECLAKEALT 256
+W+VM ++EA + R + D A AAE L+K A+
Sbjct: 231 VWDVMTDEEACEMARKRILLWHKKNAVAGGASLLADERRKEGKDPAAMSAAEYLSKLAIQ 290
Query: 257 RMSRSNISCVVV 268
R S+ NIS VVV
Sbjct: 291 RGSKDNISVVVV 302
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid
Dehydrogenase Phosphatase With Mg (Ii) Ions At The
Active Site
Length = 389
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 96/231 (41%), Gaps = 40/231 (17%)
Query: 77 ELWFFGVFDAQVGDSVARFMQSHFFDRKLKPSQIRRKSKDTLKK-AYLXXXXXXXXXXXX 135
E+ +F V+D G + A F +H ++ + + K+ +TL A+L
Sbjct: 148 EVLYFAVYDGHGGPAAADFCHTHM-EKCIMDLLPKEKNLETLLTLAFLEIDKAFSSHARL 206
Query: 136 XEK---WRAGSASVMVI--NGEKLVIANMGEYRAVVCRDGVAHQISSGRQHTAKRHWSRK 190
+G+ + + + +G +LV+A++G+ RA++CR G +++ HT +R ++
Sbjct: 207 SADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTI--DHTPERKDEKE 264
Query: 191 LFS-----------GTKHSKG--------SELAVGAEKI------------DSDTEFVLI 219
G H G +L + + +D F+++
Sbjct: 265 RIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVL 324
Query: 220 ASTGIWEVMKNQEAVSLIRHIGDAQEAAECLAKEALTRMSRSNISCVVVRF 270
+ GI ++ +QE + D EAA + ++A+ + N + VVV F
Sbjct: 325 TTDGINFMVNSQEICDFVNQCHDPNEAAHAVTEQAIQYGTEDNSTAVVVPF 375
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k
Length = 274
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 96/231 (41%), Gaps = 40/231 (17%)
Query: 77 ELWFFGVFDAQVGDSVARFMQSHFFDRKLKPSQIRRKSKDTLKK-AYLXXXXXXXXXXXX 135
E+ +F V+D G + A F +H ++ + + K+ +TL A+L
Sbjct: 34 EVLYFAVYDGHGGPAAADFCHTHM-EKCIMDLLPKEKNLETLLTLAFLEIDKAFSSHARL 92
Query: 136 XEK---WRAGSASVMVI--NGEKLVIANMGEYRAVVCRDGVAHQISSGRQHTAKRHWSRK 190
+G+ + + + +G +LV+A++G+ RA++CR G +++ HT +R ++
Sbjct: 93 SADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTI--DHTPERKDEKE 150
Query: 191 LFS-----------GTKHSKG--------SELAVGAEKI------------DSDTEFVLI 219
G H G +L + + +D F+++
Sbjct: 151 RIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVL 210
Query: 220 ASTGIWEVMKNQEAVSLIRHIGDAQEAAECLAKEALTRMSRSNISCVVVRF 270
+ GI ++ +QE + D EAA + ++A+ + N + VVV F
Sbjct: 211 TTDGINFMVNSQEICDFVNQCHDPNEAAHAVTEQAIQYGTEDNSTAVVVPF 261
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE
COMPLEXED With Zn2+
Length = 304
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 82/208 (39%), Gaps = 49/208 (23%)
Query: 80 FFGVFDAQVGDSVARFMQSHFFD-RKLKPSQIRRKSKDTLKKAYLXXXXXXXXXXXXXE- 137
FF V+D G VA++ H K + R++ + LK+A+L E
Sbjct: 53 FFAVYDGHGGAEVAQYCSLHLPTFLKTVEAYGRKEFEKALKEAFLGFDATLLQEKVIEEL 112
Query: 138 ---------------KWRAGSASVMVINGEKLVIANMGEYRAVVCRDGVAHQIS------ 176
K +A V +++G+ L +AN G+ R VVCR+G A ++S
Sbjct: 113 KVLSGDSAGSDAEPGKDSGCTAVVALLHGKDLYVANAGDSRCVVCRNGKALEMSFDHKPE 172
Query: 177 -----------SGRQHTAKR-----HWSRKL----FSGTKHSKGSELAVGA----EKID- 211
GR R + SR + + K E + A EKI
Sbjct: 173 DTVEYQRIEKAGGRVTLDGRVNGGLNLSRAIGDHGYKMNKSLPAEEQMISALPDIEKITV 232
Query: 212 -SDTEFVLIASTGIWEVMKNQEAVSLIR 238
+ EF+++A GIW M +++ V ++
Sbjct: 233 GPEDEFMVLACDGIWNFMTSEQVVQFVQ 260
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
pdb|2P8E|B Chain B, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
Length = 307
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 89/247 (36%), Gaps = 53/247 (21%)
Query: 76 IELW-FFGVFDAQVGDSVARFMQSHFFDRKLKPSQIR-------------RKSKDTLKKA 121
+E W FF V+D G VA + +H + R K+ ++
Sbjct: 52 LEDWSFFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAAGKSGSALELSVENVKNGIRTG 111
Query: 122 YLXXXXXXXXXXXXXEKW-RAGSASV-MVINGEKLVIANMGEYRAVVCRDGVAHQISSGR 179
+L R+GS +V ++I+ + + N G+ RAV+ R+G +
Sbjct: 112 FLKIDEYMRNFSDLRNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDH 171
Query: 180 QHTAKRHWSRKLFSG----TKHSKGSELAVGAEKIDSD---------------------- 213
+ R R +G + GS LAV D D
Sbjct: 172 KPCNPREKERIQNAGGSVMIQRVNGS-LAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYE 230
Query: 214 ------TEFVLIASTGIWEVMKNQEAVSLIRH----IGDAQEAAECLAKEALTRMSRSNI 263
EF+++A GIW+VM N+E ++ D + + L + SR N+
Sbjct: 231 ILRAEEDEFIILAXDGIWDVMSNEELCEYVKSRLEVSDDLENVCNWVVDTCLHKGSRDNM 290
Query: 264 SCVVVRF 270
S V+V F
Sbjct: 291 SIVLVCF 297
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Abi2
pdb|3UJK|A Chain A, Crystal Structure Of Protein Phosphatase Abi2
pdb|3UJL|B Chain B, Crystal Structure Of Abscisic Acid Bound Pyl2 In Complex
With Type 2c Protein Phosphatase Abi2
Length = 324
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 98/252 (38%), Gaps = 65/252 (25%)
Query: 80 FFGVFDAQVGDSVARFMQSHFFDR------KLKPSQI-----RRKSKDTLKKAYLXXXXX 128
FFGV+D G VA + + K KP + K K L +++
Sbjct: 61 FFGVYDGHGGSQVANYCRERMHLALTEEIVKEKPEFCDGDTWQEKWKKALFNSFMRVDSE 120
Query: 129 XXXXXXXXEKWRAGSASVM-VINGEKLVIANMGEYRAVVCRDGVAHQIS----SGRQHTA 183
E GS SV+ V+ + +AN G+ RAV+CR +S R A
Sbjct: 121 IETVAHAPET--VGSTSVVAVVFPTHIFVANCGDSRAVLCRGKTPLALSVDHKPDRDDEA 178
Query: 184 KR---------HWS-RKLFS--------GTKHSKGSELA---VGAEKIDSDTEFVLIAST 222
R W+ ++F G ++ K S + V + + + + +++AS
Sbjct: 179 ARIEAAGGKVIRWNGARVFGVLAMSRSIGDRYLKPSVIPDPEVTSVRRVKEDDCLILASD 238
Query: 223 GIWEVMKNQEAVSLIRH-----------IGD---------------AQEAAECLAKEALT 256
G+W+VM N+E L R G+ A AAE L+K AL
Sbjct: 239 GLWDVMTNEEVCDLARKRILLWHKKNAMAGEALLPAEKRGEGKDPAAMSAAEYLSKMALQ 298
Query: 257 RMSRSNISCVVV 268
+ S+ NIS VVV
Sbjct: 299 KGSKDNISVVVV 310
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor
Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+
Length = 343
Score = 36.2 bits (82), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 71/172 (41%), Gaps = 46/172 (26%)
Query: 143 SASVMVINGEKLVIANMGEYRAVVCRDGVAHQISSGRQHTAKRHWSR------------- 189
+A V ++ +V++N G+ RAV+ R A +S + + ++R
Sbjct: 160 TAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQG 219
Query: 190 -KLFS--------GTKHSKG---SELAVGAEKIDSDTEFVLIASTGIWEVMKNQEAVSLI 237
++F G ++ K E V + E +++AS G+W+VM NQE +
Sbjct: 220 ARVFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIA 279
Query: 238 RH--------------------IGDA-QEAAECLAKEALTRMSRSNISCVVV 268
R I A Q AA+ L+ AL + S+ NIS +V+
Sbjct: 280 RRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDNISIIVI 331
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 350
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 71/172 (41%), Gaps = 46/172 (26%)
Query: 143 SASVMVINGEKLVIANMGEYRAVVCRDGVAHQISSGRQHTAKRHWSR------------- 189
+A V ++ +V++N G+ RAV+ R A +S + + ++R
Sbjct: 167 TAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQG 226
Query: 190 -KLFS--------GTKHSKG---SELAVGAEKIDSDTEFVLIASTGIWEVMKNQEAVSLI 237
++F G ++ K E V + E +++AS G+W+VM NQE +
Sbjct: 227 ARVFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIA 286
Query: 238 RH--------------------IGDA-QEAAECLAKEALTRMSRSNISCVVV 268
R I A Q AA+ L+ AL + S+ NIS +V+
Sbjct: 287 RRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDNISIIVI 338
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
pdb|3RT0|B Chain B, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
Length = 340
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 71/172 (41%), Gaps = 46/172 (26%)
Query: 143 SASVMVINGEKLVIANMGEYRAVVCRDGVAHQISSGRQHTAKRHWSR------------- 189
+A V ++ +V++N G+ RAV+ R A +S + + ++R
Sbjct: 157 TAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQG 216
Query: 190 -KLFS--------GTKHSKG---SELAVGAEKIDSDTEFVLIASTGIWEVMKNQEAVSLI 237
++F G ++ K E V + E +++AS G+W+VM NQE +
Sbjct: 217 ARVFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIA 276
Query: 238 RH--------------------IGDA-QEAAECLAKEALTRMSRSNISCVVV 268
R I A Q AA+ L+ AL + S+ NIS +V+
Sbjct: 277 RRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDNISIIVI 328
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In
Complex With The Hab1 Type 2c Phosphatase Catalytic
Domain
pdb|3ZVU|B Chain B, Structure Of The Pyr1 His60pro Mutant In Complex With The
Hab1 Phosphatase And Abscisic Acid
Length = 337
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 71/172 (41%), Gaps = 46/172 (26%)
Query: 143 SASVMVINGEKLVIANMGEYRAVVCRDGVAHQISSGRQHTAKRHWSR------------- 189
+A V ++ +V++N G+ RAV+ R A +S + + ++R
Sbjct: 154 TAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQG 213
Query: 190 -KLFS--------GTKHSKG---SELAVGAEKIDSDTEFVLIASTGIWEVMKNQEAVSLI 237
++F G ++ K E V + E +++AS G+W+VM NQE +
Sbjct: 214 ARVFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIA 273
Query: 238 RH--------------------IGDA-QEAAECLAKEALTRMSRSNISCVVV 268
R I A Q AA+ L+ AL + S+ NIS +V+
Sbjct: 274 RRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDNISIIVI 325
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Hab1
Length = 341
Score = 35.8 bits (81), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 71/172 (41%), Gaps = 46/172 (26%)
Query: 143 SASVMVINGEKLVIANMGEYRAVVCRDGVAHQISSGRQHTAKRHWSR------------- 189
+A V ++ +V++N G+ RAV+ R A +S + + ++R
Sbjct: 158 TAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQG 217
Query: 190 -KLFS--------GTKHSKG---SELAVGAEKIDSDTEFVLIASTGIWEVMKNQEAVSLI 237
++F G ++ K E V + E +++AS G+W+VM NQE +
Sbjct: 218 ARVFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIA 277
Query: 238 RH--------------------IGDA-QEAAECLAKEALTRMSRSNISCVVV 268
R I A Q AA+ L+ AL + S+ NIS +V+
Sbjct: 278 RRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDNISIIVI 329
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex
With Hab1
Length = 321
Score = 35.8 bits (81), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 71/172 (41%), Gaps = 46/172 (26%)
Query: 143 SASVMVINGEKLVIANMGEYRAVVCRDGVAHQISSGRQHTAKRHWSR------------- 189
+A V ++ +V++N G+ RAV+ R A +S + + ++R
Sbjct: 143 TAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQG 202
Query: 190 -KLFS--------GTKHSKG---SELAVGAEKIDSDTEFVLIASTGIWEVMKNQEAVSLI 237
++F G ++ K E V + E +++AS G+W+VM NQE +
Sbjct: 203 ARVFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIA 262
Query: 238 RH--------------------IGDA-QEAAECLAKEALTRMSRSNISCVVV 268
R I A Q AA+ L+ AL + S+ NIS +V+
Sbjct: 263 RRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDNISIIVI 314
>pdb|3GBG|A Chain A, Crystal Structure Of Toxt From Vibrio Cholerae O395
Length = 276
Score = 28.1 bits (61), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 27/57 (47%)
Query: 201 SELAVGAEKIDSDTEFVLIASTGIWEVMKNQEAVSLIRHIGDAQEAAECLAKEALTR 257
SE+ G +I+ EF+ + +G + ++ + I DA E CL K +TR
Sbjct: 128 SEVVNGFREINYSDEFLKVFFSGFFSKVEKKYNSIFITDDLDAMEKISCLVKSDITR 184
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.132 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,392,835
Number of Sequences: 62578
Number of extensions: 202775
Number of successful extensions: 508
Number of sequences better than 100.0: 18
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 460
Number of HSP's gapped (non-prelim): 37
length of query: 271
length of database: 14,973,337
effective HSP length: 97
effective length of query: 174
effective length of database: 8,903,271
effective search space: 1549169154
effective search space used: 1549169154
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)