Query 043373
Match_columns 809
No_of_seqs 169 out of 1041
Neff 2.9
Searched_HMMs 13730
Date Mon Mar 25 07:07:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043373.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/043373hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1q90b_ f.21.1.2 (B:) Cytochro 29.9 31 0.0023 32.3 5.5 95 556-670 33-136 (212)
2 d1i1ip_ d.92.1.5 (P:) Neurolys 24.9 1.2E+02 0.0085 32.0 9.7 73 108-204 86-165 (665)
3 d1eqfa2 a.29.2.1 (A:1498-1625) 24.8 57 0.0042 27.5 5.9 60 273-332 60-125 (128)
4 d1jr3a1 a.80.1.1 (A:243-368) g 24.6 17 0.0012 29.8 2.3 32 187-218 3-34 (126)
5 d3cx5c2 f.21.1.2 (C:1-261) Mit 23.1 50 0.0036 31.7 5.7 102 550-671 23-136 (261)
6 d1d2za_ a.77.1.2 (A:) Pelle de 20.5 45 0.0033 26.8 4.1 76 105-184 8-94 (102)
7 d1s4bp_ d.92.1.5 (P:) Neurolys 20.1 4.6E+02 0.034 27.1 14.2 72 109-204 76-154 (654)
8 d1rxqa_ a.213.1.1 (A:) YfiT {B 18.7 80 0.0058 26.4 5.6 106 106-224 14-137 (174)
9 d1wrka1 a.39.1.5 (A:4-85) Trop 18.3 39 0.0028 26.2 3.2 36 135-170 7-44 (82)
10 d5pala_ a.39.1.4 (A:) Parvalbu 18.1 50 0.0036 26.9 3.9 56 102-162 1-59 (109)
No 1
>d1q90b_ f.21.1.2 (B:) Cytochrome b6 subunit of the cytochrome b6f complex {Chlamydomonas reinhardtii [TaxId: 3055]}
Probab=29.86 E-value=31 Score=32.32 Aligned_cols=95 Identities=19% Similarity=0.234 Sum_probs=56.5
Q ss_pred CchHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc------hhHHHHHHHHHHHHHH
Q 043373 556 FRPSNYSLSMTIAFLVSFLQIFNRGPLITAIDAGLGVLVFTMFALYDAGKILKRSDSD------DHHKASAHLYWDLSAP 629 (809)
Q Consensus 556 LGGfLFmLGLIgLIIASLINIF~~S~lLsLIIS~LGVLVFSGYIAYDTQrIIkrySpD------DYI~AALSLYLDFINL 629 (809)
+|+++.. .++..++.|++-.|...+-...++..+ |.|+++.... -...|++..-+=++-+
T Consensus 33 ~Gsll~~-~~~iqi~TGi~L~~~Y~p~~~~A~~Sv-------------~~I~~~v~~G~liR~lH~~gAs~~~~~~~lHm 98 (212)
T d1q90b_ 33 IGGITFT-CFLVQVATGFAMTFYYRPTVAEAFASV-------------QYIMTDVNFGWLIRSIHRWSASMMVLMMVLHV 98 (212)
T ss_dssp HHHHHHH-HHHHHHHHHHHHTTTCCCSTTTHHHHH-------------HHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHhhhhHHHHHH-------------HHHhhhCCCchhhcccccccchHHHHHHHHHH
Confidence 4777776 777778888776664333333333332 2333332221 1244555555555566
Q ss_pred HHHHhcCCCCCCe---EEEeeecCCCcchhhHHHHHHHhhhhee
Q 043373 630 TLWCSHGPAPPPV---WVTTRYISDGVELALFNVAIAAFGVVLA 670 (809)
Q Consensus 630 FLyIL~G~~~~~~---~~t~r~~~dgv~l~~~~~~~~~~~~~~~ 670 (809)
+.-+..|+-++|+ |++ |+-+-+.-.+.|-.|-+|-
T Consensus 99 ~r~~~~gsyk~pre~~W~~------Gv~l~~l~m~~aftGY~Lp 136 (212)
T d1q90b_ 99 FRVYLTGGFKRPRELTWVT------GVIMAVCTVSFGVTGYSLP 136 (212)
T ss_dssp HHHHTTTTTSSSCHHHHHH------HHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHcCcccCcccceehH------hHHHHHHHHHHHHhhhhcc
Confidence 6666778888896 666 7777777777777776664
No 2
>d1i1ip_ d.92.1.5 (P:) Neurolysin (endopeptidase 24.16, thimet oligopeptidase) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=24.93 E-value=1.2e+02 Score=31.99 Aligned_cols=73 Identities=22% Similarity=0.300 Sum_probs=40.4
Q ss_pred CHHHHHhHhhhcccCchhhhh-HHHHHH------hcCCHHHHhhHHHHHHHhhcCCCCCchhhhhhhhcccccccccccc
Q 043373 108 SEEEKKKICEFAGRLSEEEKI-RIFEIL------MGLSEEEKRKLSEIVEEWNSGGEDGKIGELVEGLSREGKRKLCGVL 180 (809)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (809)
+++-..++++|...++-.+++ +.++-+ ..|++|++|-+.+.+.+..-.| +
T Consensus 86 ~~~~~~~l~~~~~~i~~n~~Ly~~l~~l~~~~~~~~L~~E~~rlle~~l~df~~sG----------------------~- 142 (665)
T d1i1ip_ 86 STEADKKLSRFDIEMSMREDVFQRIVHLQETCDLEKIKPEARRYLEKSIKMGKRNG----------------------L- 142 (665)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHSCTTSSCHHHHHHHHHHHHHHHHTT----------------------T-
T ss_pred HHHHHHHHHHHHHHhhcCHHHHHHHHHHHcCcccccCCHHHHHHHHHHHHHHHHcC----------------------C-
Confidence 344555666666666544432 111111 3567777777776666554333 2
Q ss_pred ccCCCCchHHHHHHHhhcChHHHH
Q 043373 181 KDLSDGDKEKITELLEGLNEKQTK 204 (809)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~ 204 (809)
+|++.+|++..++-+.+.+..++
T Consensus 143 -~L~~~~r~r~~~l~~els~l~~~ 165 (665)
T d1i1ip_ 143 -HLSEHIRNEIKSMKKRMSELCID 165 (665)
T ss_dssp -TSCHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCChHHHHHHHHHHHHHHHHHHH
Confidence 35666777777766666555544
No 3
>d1eqfa2 a.29.2.1 (A:1498-1625) TAFII250 double bromodomain module {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.82 E-value=57 Score=27.51 Aligned_cols=60 Identities=17% Similarity=0.223 Sum_probs=44.0
Q ss_pred hccCCCCchhhhhhhhhhhcc------cCcchHHHHHhhhhhhhhHHHHHHHHHHhhhhhccHHHh
Q 043373 273 VKVDDGISKEELVTDIRHFWE------GENNTIAKFLKSLEVEYQDEVREIRESLVKLKESTEKEK 332 (809)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (809)
++-+.=-|.+|+..|++.-|. |++..+.+.-+.|+-.+..+++++++.+.++.+.-...|
T Consensus 60 l~~~~Y~s~~ef~~Dv~li~~Na~~yN~~~s~i~~~A~~L~~~~~~~l~~~~~~~~~le~~i~~~k 125 (128)
T d1eqfa2 60 ISKHKYQSRESFLDDVNLILANSVKYNGPESQYTKTAQEIVNVCYQTLTEYDEHLTQLEKDICTAK 125 (128)
T ss_dssp HHTTCCSSHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred HHhhccccHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHhHHHHHHHHhHHhhhc
Confidence 344445678899999987663 677888888888888888888888888777665544443
No 4
>d1jr3a1 a.80.1.1 (A:243-368) gamma subunit {Escherichia coli [TaxId: 562]}
Probab=24.59 E-value=17 Score=29.78 Aligned_cols=32 Identities=19% Similarity=0.489 Sum_probs=29.3
Q ss_pred chHHHHHHHhhcChHHHHHHHHHHHHhcHHHH
Q 043373 187 DKEKITELLEGLNEKQTKKLIELVESLSEEGL 218 (809)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (809)
|.+++-+|++.+-+++++++++.++.+.+.|.
T Consensus 3 D~~~~~~L~~~I~~~d~~~~L~~l~~i~~~G~ 34 (126)
T d1jr3a1 3 DDDQALSLVEAMVEANGERVMALINEAAARGI 34 (126)
T ss_dssp CHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 78999999999999999999999999888764
No 5
>d3cx5c2 f.21.1.2 (C:1-261) Mitochondrial cytochrome b subunit, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=23.14 E-value=50 Score=31.66 Aligned_cols=102 Identities=13% Similarity=0.142 Sum_probs=58.1
Q ss_pred CccccCC---chHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc------hhHHHHH
Q 043373 550 DGDLSCF---RPSNYSLSMTIAFLVSFLQIFNRGPLITAIDAGLGVLVFTMFALYDAGKILKRSDSD------DHHKASA 620 (809)
Q Consensus 550 KrDFT~L---GGfLFmLGLIgLIIASLINIF~~S~lLsLIIS~LGVLVFSGYIAYDTQrIIkrySpD------DYI~AAL 620 (809)
.++++++ |+++.. .++..++.|++-.+...+-.+.++..+ |.|+++.... ....|++
T Consensus 23 p~~in~~w~~G~ll~~-~~~iqiiTGi~L~~~Y~p~~~~A~~Sv-------------~~i~~~v~~Gw~iR~~H~~ga~~ 88 (261)
T d3cx5c2 23 PSSINYWWNMGSLLGL-CLVIQIVTGIFMAMHYSSNIELAFSSV-------------EHIMRDVHNGYILRYLHANGASF 88 (261)
T ss_dssp ETTCCGGGGHHHHHHH-HHHHHHHHHHHHHTTCCCSTTTHHHHH-------------HHHHHTSTTHHHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHH-HHHHHHHHHHHHHheecCChHHHHHHH-------------HHHHhhhccChhhhhcccccHHH
Confidence 4466655 666666 666667777766553333333333331 2233322221 1234555
Q ss_pred HHHHHHHHHHHHHhcCCCCCCe---EEEeeecCCCcchhhHHHHHHHhhhheee
Q 043373 621 HLYWDLSAPTLWCSHGPAPPPV---WVTTRYISDGVELALFNVAIAAFGVVLAD 671 (809)
Q Consensus 621 SLYLDFINLFLyIL~G~~~~~~---~~t~r~~~dgv~l~~~~~~~~~~~~~~~~ 671 (809)
..-+=++-++.-+..|+=+.|+ |++ |+-+-+.-.+.|..|-+|-.
T Consensus 89 ~~~~~~lH~~r~~~~gsy~~pre~~W~~------Gv~l~~l~~~~af~GY~Lpw 136 (261)
T d3cx5c2 89 FFMVMFMHMAKGLYYGSYRSPRVTLWNV------GVIIFILTIATAFLGYCCVY 136 (261)
T ss_dssp HHHHHHHHHHHHHHHTTTSTTCHHHHHH------HHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhccccCccchhHHh------hHHHHHHHHHHHHhhhhcCC
Confidence 5555555566666778777776 665 88777777777777777643
No 6
>d1d2za_ a.77.1.2 (A:) Pelle death domain {Drosophila melanogaster [TaxId: 7227]}
Probab=20.48 E-value=45 Score=26.83 Aligned_cols=76 Identities=11% Similarity=0.190 Sum_probs=52.0
Q ss_pred cccCHHHHHhHhhhcccCchhhhhHHHHHHhcCCHHHHhh-----------HHHHHHHhhcCCCCCchhhhhhhhccccc
Q 043373 105 DRLSEEEKKKICEFAGRLSEEEKIRIFEILMGLSEEEKRK-----------LSEIVEEWNSGGEDGKIGELVEGLSREGK 173 (809)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (809)
..|...-++++|..- .....-|-+--.+|++.++.+. -.++...|.. .++..|++|++-|.+-|.
T Consensus 8 ~~Lp~~~r~~L~~~L---d~~~~Wr~LA~~Lg~~~~~I~~i~~~~~~~~Spt~~lL~~W~~-~~~~Tv~~L~~~L~~~~~ 83 (102)
T d1d2za_ 8 RLLPLPVRAQLCAHL---DALDVWQQLATAVKLYPDQVEQISSQKQRGRSASNEFLNIWGG-QYNHTVQTLFALFKKLKL 83 (102)
T ss_dssp GGSCHHHHHHHHHHH---HHHTCHHHHHHHTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHH-HHCCBHHHHHHHHHHTTC
T ss_pred hhCCHHHHHHHHHHc---CCcccHHHHHHHhCCCHHHHHHHHhcccCCCChHHHHHHHHHh-cCCCcHHHHHHHHHHcCh
Confidence 347788888888753 3445566666677888766544 3457788853 245788999988888887
Q ss_pred cccccccccCC
Q 043373 174 RKLCGVLKDLS 184 (809)
Q Consensus 174 ~~~~~~~~~~~ 184 (809)
....-.+++.-
T Consensus 84 ~da~~~i~~~~ 94 (102)
T d1d2za_ 84 HNAMRLIKDYV 94 (102)
T ss_dssp HHHHHHTGGGS
T ss_pred HHHHHHHHHHH
Confidence 76666666543
No 7
>d1s4bp_ d.92.1.5 (P:) Neurolysin (endopeptidase 24.16, thimet oligopeptidase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.08 E-value=4.6e+02 Score=27.08 Aligned_cols=72 Identities=25% Similarity=0.322 Sum_probs=43.3
Q ss_pred HHHHHhHhhhcccCchhhhh--HHHHH-----HhcCCHHHHhhHHHHHHHhhcCCCCCchhhhhhhhccccccccccccc
Q 043373 109 EEEKKKICEFAGRLSEEEKI--RIFEI-----LMGLSEEEKRKLSEIVEEWNSGGEDGKIGELVEGLSREGKRKLCGVLK 181 (809)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (809)
++--.++.+|..+++-.+++ |+-.+ -.+|++|++|-+.++.+++...| +
T Consensus 76 ~~~~~~l~~~~~~i~~n~~Ly~~l~~l~~~~~~~~L~~E~~r~le~~~~dF~~sG----------------------~-- 131 (654)
T d1s4bp_ 76 TEADKKLSEFDVEMSMREDVYQRIVWLQEKVQKDSLRPEAARYLERLIKLGRRNG----------------------L-- 131 (654)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHTT----------------------T--
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHcCcccccCCHHHHHHHHHHHHHHHHcC----------------------C--
Confidence 34456677776666655543 22111 23678888888877777664433 2
Q ss_pred cCCCCchHHHHHHHhhcChHHHH
Q 043373 182 DLSDGDKEKITELLEGLNEKQTK 204 (809)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~ 204 (809)
+|++.+|+++.++-+.+.+-.++
T Consensus 132 ~L~~~~r~r~~~l~~els~L~~~ 154 (654)
T d1s4bp_ 132 HLPRETQENIKRIKKKLSLLCID 154 (654)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHHH
Confidence 36677778877776666555444
No 8
>d1rxqa_ a.213.1.1 (A:) YfiT {Bacillus subtilis [TaxId: 1423]}
Probab=18.68 E-value=80 Score=26.38 Aligned_cols=106 Identities=17% Similarity=0.149 Sum_probs=59.7
Q ss_pred ccCHHHHHhHhhhcccCchhhhhHHHHHHhcCCHHHHhhHHHHHHHhhcCCCCCchhhhhhhhccc-------ccccccc
Q 043373 106 RLSEEEKKKICEFAGRLSEEEKIRIFEILMGLSEEEKRKLSEIVEEWNSGGEDGKIGELVEGLSRE-------GKRKLCG 178 (809)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 178 (809)
++|.+++......- ++...++.+.+-|||+|+-+ |..+...-.|++++.-|..- -++-+-|
T Consensus 14 ~~~~~~~~~~i~~L----~~~~~~L~~~l~~Ls~e~l~--------~~~~~~~WSi~~il~Hl~~~e~~~~~r~~~~~~~ 81 (174)
T d1rxqa_ 14 SISKEQKDKWIQVL----EEVPAKLKQAVEVMTDSQLD--------TPYRDGGWTVRQVVHHLADSHMNSYIRFKLSLTE 81 (174)
T ss_dssp CCCHHHHHHHHHHH----HHHHHHHHHHHTTCCHHHHT--------SBSSTTSCBHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CCCHHHHHHHHHHH----HHHHHHHHHHHHcCCHHHhc--------CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 56766766655433 34466788889999998754 22222223677777665321 1111112
Q ss_pred ccccCCCCc-----------hHHHHHHHhhcChHHHHHHHHHHHHhcHHHHhhhhhh
Q 043373 179 VLKDLSDGD-----------KEKITELLEGLNEKQTKKLIELVESLSEEGLKRVGKH 224 (809)
Q Consensus 179 ~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (809)
....+...+ .....++++.+. ...+.+++.+++|+++-+.+.+.|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~r~~l~~~l~~l~~~~l~~~~~~ 137 (174)
T d1rxqa_ 82 ETPAIRPYDEKAWSELKDSKTADPSGSLALLQ-ELHGRWTALLRTLTDQQFKRGFYH 137 (174)
T ss_dssp SSCBCCCCCHHHHHHSHHHHHSCHHHHHHHHH-HHHHHHHHHHHHCCHHHHTCEEEC
T ss_pred ccccccccchHHHHhhhhccccCHHHHHHHHH-HHHHHHHHHHhcCCHHhhcccCCC
Confidence 222222222 223344444443 244668899999999999988766
No 9
>d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}
Probab=18.29 E-value=39 Score=26.25 Aligned_cols=36 Identities=31% Similarity=0.417 Sum_probs=28.8
Q ss_pred hcCCHHHHhhHHHHHHHhhcCCCCCch--hhhhhhhcc
Q 043373 135 MGLSEEEKRKLSEIVEEWNSGGEDGKI--GELVEGLSR 170 (809)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 170 (809)
..||+++.+.+.+..+.+...|.||+| .||...|..
T Consensus 7 ~~ls~eq~~~~~~~F~~fD~d~~~G~I~~~el~~~l~~ 44 (82)
T d1wrka1 7 EQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRM 44 (82)
T ss_dssp HHCCHHHHHHHHHHHHHHTTTCTTSSBCHHHHHHHHHH
T ss_pred hhCCHHHHHHHHHHHHHHcCcCCCCeEeHHHHHHHHHH
Confidence 358999999999999999999888876 456555543
No 10
>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]}
Probab=18.12 E-value=50 Score=26.90 Aligned_cols=56 Identities=20% Similarity=0.322 Sum_probs=37.4
Q ss_pred ccccccCHHHHHhHhhh---cccCchhhhhHHHHHHhcCCHHHHhhHHHHHHHhhcCCCCCchh
Q 043373 102 PVEDRLSEEEKKKICEF---AGRLSEEEKIRIFEILMGLSEEEKRKLSEIVEEWNSGGEDGKIG 162 (809)
Q Consensus 102 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (809)
|+-|.|++++-++++.- .|.++-+|=+ -+||++......+.++.+.|...| +|.|.
T Consensus 1 p~~~~l~~~di~~~~~~~~~~G~idf~eF~----~~~~~~~~~~~~l~~~F~~~D~d~-~G~I~ 59 (109)
T d5pala_ 1 PMTKVLKADDINKAISAFKDPGTFDYKRFF----HLVGLKGKTDAQVKEVFEILDKDQ-SGFIE 59 (109)
T ss_dssp CGGGTSCHHHHHHHHHHTCSTTCCCHHHHH----HHHTCTTCCHHHHHHHHHHHCTTC-SSEEC
T ss_pred ChhhHccHHHHHHHHHhcCCCCcCcHHHHH----HHHHhcCCCHHHHHHHHhhhcCCC-CCeEc
Confidence 78899999999987764 5666655543 346665444446677777776544 56663
Done!