Your job contains 1 sequence.
>043376
MGFSFTIPTLTFKFHHNFPPKPFISFPPKRFNFISLRTLKAIGPDGKFYPTPSDDDPPEA
PEDTAHGVSKFQQIHRQAAKARKRQEDDFKANQSTYLNAIADVDDPPVNTGDVSEQDDFF
GEIDKAVAMKRDEYVKKGLIKPKKREDDTVRQGIEELEPEEVVDLEEIDELQGLRVVSED
EEDEGLDDDSKSGKFDVNLDATSDKYKDKGNGLVLDSSFDLDFDSFGKSRARIVEPKFKM
SLAELLDESKVVPVSVYGDLEVEITGIQHDSRVVSAGDLFVCCVGRKTDGHLYLSEADKR
GAVAVVASKEIDIEETLGCKALVIVEDTNLVLPHWLPLFIGIRRRIWQ
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 043376
(348 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2026699 - symbol:MURE species:3702 "Arabidopsi... 431 2.4e-62 2
TIGR_CMR|GSU_3074 - symbol:GSU_3074 "UDP-N-acetylmuramoyl... 139 1.1e-06 1
TIGR_CMR|BA_4053 - symbol:BA_4053 "UDP-N-acetylmuramoylal... 120 0.00015 1
>TAIR|locus:2026699 [details] [associations]
symbol:MURE species:3702 "Arabidopsis thaliana"
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008360 "regulation of cell shape" evidence=IEA]
[GO:0009058 "biosynthetic process" evidence=IEA;ISS] [GO:0016874
"ligase activity" evidence=IEA;ISS] [GO:0016881 "acid-amino acid
ligase activity" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0009295 "nucleoid" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0009658 "chloroplast organization"
evidence=RCA;IMP] [GO:0010020 "chloroplast fission" evidence=IMP]
[GO:0006364 "rRNA processing" evidence=RCA] [GO:0006399 "tRNA
metabolic process" evidence=RCA] [GO:0009902 "chloroplast
relocation" evidence=RCA] [GO:0010027 "thylakoid membrane
organization" evidence=RCA] [GO:0034660 "ncRNA metabolic process"
evidence=RCA] [GO:0042793 "transcription from plastid promoter"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] HAMAP:MF_00208 InterPro:IPR000713
InterPro:IPR004101 InterPro:IPR005761 InterPro:IPR013221
Pfam:PF01225 Pfam:PF02875 Pfam:PF08245 UniPathway:UPA00219
EMBL:CP002684 GO:GO:0005524 GO:GO:0009507 GO:GO:0051301
GO:GO:0008360 GO:GO:0007049 GO:GO:0009252 GO:GO:0010020
GO:GO:0009295 Gene3D:3.40.1190.10 Gene3D:3.90.190.20
SUPFAM:SSF53244 SUPFAM:SSF53623 GO:GO:0008765 TIGRFAMs:TIGR01085
OMA:RPLMGEA IPI:IPI00529969 RefSeq:NP_176555.4 UniGene:At.36093
ProteinModelPortal:F4I3P9 SMR:F4I3P9 PRIDE:F4I3P9
EnsemblPlants:AT1G63680.1 GeneID:842672 KEGG:ath:AT1G63680
Uniprot:F4I3P9
Length = 772
Score = 431 (156.8 bits), Expect = 2.4e-62, Sum P(2) = 2.4e-62
Identities = 88/106 (83%), Positives = 97/106 (91%)
Query: 227 GKSRARIVEPKFKMSLAELLDESKVVPVSVYGDLEVEITGIQHDSRVVSAGDLFVCCVGR 286
G+S+ARIVEPKFKM LAELLDESKVVP+SVYGDL+VEITGIQHDSR VSAGDLFVCC+G
Sbjct: 228 GESKARIVEPKFKMCLAELLDESKVVPISVYGDLDVEITGIQHDSRGVSAGDLFVCCLGS 287
Query: 287 KTDGHLYLSEADKRGAVAVVASKEIDIEETLGCKALVIVEDTNLVL 332
+ +LSEADKRGAVAVVASKEIDIE+TLGC+ALVIVEDTN VL
Sbjct: 288 EN----FLSEADKRGAVAVVASKEIDIEDTLGCRALVIVEDTNAVL 329
Score = 238 (88.8 bits), Expect = 2.4e-62, Sum P(2) = 2.4e-62
Identities = 47/79 (59%), Positives = 63/79 (79%)
Query: 66 HGVSKFQQIHRQAAKARKRQEDDFKANQSTYLNAIADVDDPPVNTGDVSEQD--DFFGEI 123
HGVSKFQQI RQAA+ARK +E+DF+ N++TYL+AIADV+D TG E+ D F +I
Sbjct: 67 HGVSKFQQIQRQAARARKLEEEDFEKNRNTYLSAIADVEDA-AETGRDDEESGGDLFSDI 125
Query: 124 DKAVAMKRDEYVKKGLIKP 142
D+A++MKR E+VK+GL+KP
Sbjct: 126 DRAISMKRSEFVKQGLLKP 144
>TIGR_CMR|GSU_3074 [details] [associations]
symbol:GSU_3074
"UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate ligase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008765
"UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase
activity" evidence=ISS] [GO:0009252 "peptidoglycan biosynthetic
process" evidence=ISS] HAMAP:MF_00208 InterPro:IPR000713
InterPro:IPR004101 InterPro:IPR005761 InterPro:IPR013221
Pfam:PF01225 Pfam:PF02875 Pfam:PF08245 UniPathway:UPA00219
GO:GO:0005524 GO:GO:0005737 GO:GO:0051301 GO:GO:0008360
GO:GO:0007049 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0009252
Gene3D:3.40.1190.10 Gene3D:3.90.190.20 SUPFAM:SSF53244
SUPFAM:SSF53623 HOGENOM:HOG000268118 eggNOG:COG0769 KO:K01928
ProtClustDB:PRK00139 GO:GO:0008765 TIGRFAMs:TIGR01085
RefSeq:NP_954115.1 HSSP:P22188 ProteinModelPortal:Q748D2
GeneID:2686302 KEGG:gsu:GSU3074 PATRIC:22029001 OMA:RPLMGEA
BioCyc:GSUL243231:GH27-3031-MONOMER Uniprot:Q748D2
Length = 509
Score = 139 (54.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 39/98 (39%), Positives = 53/98 (54%)
Query: 245 LLDESKVV-PVSVYGDLEVEITGIQHDSRVVSAGDLFVCCVGRKTDGHLYLSEADKRGAV 303
L D ++VV P++V GDL EI G+ DSR V +G LF G +DGH +++ A +RGAV
Sbjct: 3 LEDLARVVDPIAVRGDLTREINGLYCDSRQVRSGGLFFALKGVASDGHDFIASARERGAV 62
Query: 304 AVVASKEIDIEETLGCKALVIVEDTNLVLPHWLPLFIG 341
AVV E G + + V D L + LF G
Sbjct: 63 AVVLEDET--RAPCGME-WIRVGDARLAMSRMAALFYG 97
>TIGR_CMR|BA_4053 [details] [associations]
symbol:BA_4053
"UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate ligase"
species:198094 "Bacillus anthracis str. Ames" [GO:0009252
"peptidoglycan biosynthetic process" evidence=ISS] [GO:0016881
"acid-amino acid ligase activity" evidence=ISS] HAMAP:MF_00208
InterPro:IPR000713 InterPro:IPR004101 InterPro:IPR005761
InterPro:IPR013221 Pfam:PF01225 Pfam:PF02875 Pfam:PF08245
UniPathway:UPA00219 GO:GO:0005524 GO:GO:0005737 GO:GO:0051301
GO:GO:0008360 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0007049 GO:GO:0009252
Gene3D:3.40.1190.10 Gene3D:3.90.190.20 SUPFAM:SSF53244
SUPFAM:SSF53623 HOGENOM:HOG000268118 RefSeq:NP_846293.1
RefSeq:YP_020695.1 RefSeq:YP_030016.1 ProteinModelPortal:Q81WC7
DNASU:1086243 EnsemblBacteria:EBBACT00000008767
EnsemblBacteria:EBBACT00000016254 EnsemblBacteria:EBBACT00000023692
GeneID:1086243 GeneID:2815156 GeneID:2848185 KEGG:ban:BA_4053
KEGG:bar:GBAA_4053 KEGG:bat:BAS3765 eggNOG:COG0769 KO:K01928
OMA:MAKDNGA ProtClustDB:PRK00139
BioCyc:BANT260799:GJAJ-3823-MONOMER
BioCyc:BANT261594:GJ7F-3941-MONOMER GO:GO:0008765
TIGRFAMs:TIGR01085 Uniprot:Q81WC7
Length = 491
Score = 120 (47.3 bits), Expect = 0.00015, P = 0.00015
Identities = 24/52 (46%), Positives = 32/52 (61%)
Query: 263 EITGIQHDSRVVSAGDLFVCCVGRKTDGHLYLSEADKRGAVAVVASKEIDIE 314
EIT I+ DSR V G LFVC G D H + +A +GA A+VA + ID++
Sbjct: 22 EITSIEADSRKVKEGSLFVCMKGYTVDSHDFAKQAAAQGAAAIVAERPIDVD 73
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.136 0.392 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 348 270 0.00097 114 3 11 22 0.36 34
32 0.40 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 3
No. of states in DFA: 595 (63 KB)
Total size of DFA: 175 KB (2102 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.21u 0.09s 18.30t Elapsed: 00:00:01
Total cpu time: 18.21u 0.09s 18.30t Elapsed: 00:00:01
Start: Mon May 20 22:49:23 2013 End: Mon May 20 22:49:24 2013