BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043378
(162 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3KW7|A Chain A, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
pdb|3KW7|B Chain B, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
Length = 502
Score = 83.6 bits (205), Expect = 5e-17, Method: Composition-based stats.
Identities = 40/98 (40%), Positives = 57/98 (58%), Gaps = 7/98 (7%)
Query: 40 DIKLQNA--TRLCHTKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQN-----NISIHWH 92
D+ + NA T T++ V NG FPGP I +GD I V+ ++ N +IHWH
Sbjct: 7 DLTISNADVTPDGFTRAAVVANGVFPGPLITGNKGDNFQINVIDNLTNATMLKTTTIHWH 66
Query: 93 GIGQLRSGWADGPAYITQCPIQTGQGCVYNFTIVGQRG 130
G+ Q + WADGPA++ QCPI +G +Y+FT+ Q G
Sbjct: 67 GLFQHGTNWADGPAFVNQCPIASGNSFLYDFTVPDQAG 104
>pdb|2HZH|A Chain A, Crystal Structure Of Laccase From Coriolus Zonatus At 2.6
A Resolution
Length = 499
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 50/87 (57%), Gaps = 5/87 (5%)
Query: 51 HTKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQN-----NISIHWHGIGQLRSGWADGP 105
H++ V VNG PGP I +GDQ + V+ ++ N + S+HWHG Q + WADGP
Sbjct: 20 HSRDAVVVNGGTPGPLITGNKGDQFQLNVINNLTNFTMLKSTSVHWHGFFQKGTNWADGP 79
Query: 106 AYITQCPIQTGQGCVYNFTIVGQRGKL 132
A++ QCPI G +Y+F+ Q G
Sbjct: 80 AFVNQCPIAAGSSFLYDFSTPIQAGTF 106
>pdb|1AOZ|A Chain A, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1AOZ|B Chain B, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1ASO|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASO|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASP|A Chain A, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASP|B Chain B, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASQ|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASQ|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
Length = 552
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Query: 35 RHCKFDIKLQNATRLCHTKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNN-ISIHWHG 93
RH K++++ C+ ++ +NG+FPGP I A GD +++++ + + IHWHG
Sbjct: 4 RHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHG 63
Query: 94 IGQLRSGWADGPAYITQCPIQTGQGCVYNFTI 125
I Q + WADG A I+QC I G+ YNFT+
Sbjct: 64 ILQRGTPWADGTASISQCAINPGETFFYNFTV 95
>pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A
Laccase From Trametes Versicolor In Its Oxidised Form
Containing A Full Complement Of Copper Ions
Length = 499
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Query: 53 KSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNI-----SIHWHGIGQLRSGWADGPAY 107
+ + VNG FP P I ++GD+ + VV + N+ SIHWHG Q + WADGPA+
Sbjct: 22 RDAIVVNGVFPSPLITGKKGDRFQLNVVDTLTNHTMLKSTSIHWHGFFQAGTNWADGPAF 81
Query: 108 ITQCPIQTGQGCVYNFTIVGQRGKL 132
+ QCPI +G +Y+F + Q G
Sbjct: 82 VNQCPIASGHSFLYDFHVPDQAGTF 106
>pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|B Chain B, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|C Chain C, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|D Chain D, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
Length = 499
Score = 77.4 bits (189), Expect = 4e-15, Method: Composition-based stats.
Identities = 35/84 (41%), Positives = 49/84 (58%), Gaps = 5/84 (5%)
Query: 52 TKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNI-----SIHWHGIGQLRSGWADGPA 106
++ V VNG PGP I GD+ + V+ ++ N+ SIHWHG Q + WADGPA
Sbjct: 21 SRQAVVVNGGTPGPLITGNMGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQKGTNWADGPA 80
Query: 107 YITQCPIQTGQGCVYNFTIVGQRG 130
+I QCPI +G +Y+F + Q G
Sbjct: 81 FINQCPISSGHSFLYDFQVPDQAG 104
>pdb|2QT6|A Chain A, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
pdb|2QT6|B Chain B, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
Length = 498
Score = 76.3 bits (186), Expect = 6e-15, Method: Composition-based stats.
Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 53 KSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNI-----SIHWHGIGQLRSGWADGPAY 107
++ + VN FP P I GD + +V + N+ SIHWHG Q + WADGPA+
Sbjct: 22 RAAIVVNNVFPAPLITGNMGDNFQLNLVNQMTNHTMLKTTSIHWHGFFQKGTNWADGPAF 81
Query: 108 ITQCPIQTGQGCVYNFTIVGQRG 130
I QCPI +G +Y+F + GQ G
Sbjct: 82 INQCPIASGNSFLYDFQVPGQAG 104
>pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada
Length = 580
Score = 76.3 bits (186), Expect = 7e-15, Method: Composition-based stats.
Identities = 39/95 (41%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Query: 32 GITRHCKFDIKLQNATRLCHTKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNN-ISIH 90
G+TR ++ T +T+S ++ NG PGP I+A GD L+I V ++++N SIH
Sbjct: 65 GVTREYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIH 124
Query: 91 WHGIGQLRSGWADGPAYITQCPIQTGQGCVYNFTI 125
WHGI QL S DG +TQCPI G Y F +
Sbjct: 125 WHGIRQLGSLEYDGVPGVTQCPIAPGDTLTYKFQV 159
>pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67
A Resolution
Length = 580
Score = 76.3 bits (186), Expect = 7e-15, Method: Composition-based stats.
Identities = 39/95 (41%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Query: 32 GITRHCKFDIKLQNATRLCHTKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNN-ISIH 90
G+TR ++ T +T+S ++ NG PGP I+A GD L+I V ++++N SIH
Sbjct: 65 GVTREYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIH 124
Query: 91 WHGIGQLRSGWADGPAYITQCPIQTGQGCVYNFTI 125
WHGI QL S DG +TQCPI G Y F +
Sbjct: 125 WHGIRQLGSLEYDGVPGVTQCPIAPGDTLTYKFQV 159
>pdb|4A2F|A Chain A, Coriolopsis Gallica Laccase Collected At 12.65 Kev
Length = 497
Score = 75.9 bits (185), Expect = 9e-15, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 5/84 (5%)
Query: 52 TKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNI-----SIHWHGIGQLRSGWADGPA 106
++ + VN FP P I +GD+ + V+ ++ N+ SIHWHG Q + WADGPA
Sbjct: 21 SRQAILVNDVFPSPLITGNKGDRFQLNVIDNMTNHTMLKSTSIHWHGFFQHGTNWADGPA 80
Query: 107 YITQCPIQTGQGCVYNFTIVGQRG 130
++ QCPI TG +Y+F + Q G
Sbjct: 81 FVNQCPISTGHAFLYDFQVPDQAG 104
>pdb|4A2D|A Chain A, Coriolopsis Gallica Laccase T2 Copper Depleted At Ph 4.5
pdb|4A2E|A Chain A, Crystal Structure Of A Coriolopsis Gallica Laccase At 1.7
A Resolution Ph 5.5
pdb|4A2H|A Chain A, Crystal Structure Of Laccase From Coriolopsis Gallica Ph
7.0
pdb|4A2G|A Chain A, Coriolopsis Gallica Laccase Collected At 8.98 Kev
Length = 496
Score = 75.9 bits (185), Expect = 9e-15, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 5/84 (5%)
Query: 52 TKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNI-----SIHWHGIGQLRSGWADGPA 106
++ + VN FP P I +GD+ + V+ ++ N+ SIHWHG Q + WADGPA
Sbjct: 21 SRQAILVNDVFPSPLITGNKGDRFQLNVIDNMTNHTMLKSTSIHWHGFFQHGTNWADGPA 80
Query: 107 YITQCPIQTGQGCVYNFTIVGQRG 130
++ QCPI TG +Y+F + Q G
Sbjct: 81 FVNQCPISTGHAFLYDFQVPDQAG 104
>pdb|2HRG|A Chain A, Crystal Structure Of Blue Laccase From Trametes Trogii
Complexed With P-Methylbenzoate
pdb|2HRH|A Chain A, Crystal Strucure Of Blue Laccase From Trametes Trogii
Length = 496
Score = 75.9 bits (185), Expect = 9e-15, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 5/84 (5%)
Query: 52 TKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNI-----SIHWHGIGQLRSGWADGPA 106
++ + VN FP P I +GD+ + V+ ++ N+ SIHWHG Q + WADGPA
Sbjct: 21 SRQAILVNDVFPSPLITGNKGDRFQLNVIDNMTNHTMLKSTSIHWHGFFQHGTNWADGPA 80
Query: 107 YITQCPIQTGQGCVYNFTIVGQRG 130
++ QCPI TG +Y+F + Q G
Sbjct: 81 FVNQCPISTGHAFLYDFQVPDQAG 104
>pdb|3PXL|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta
Length = 499
Score = 74.7 bits (182), Expect = 2e-14, Method: Composition-based stats.
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
Query: 52 TKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNI-----SIHWHGIGQLRSGWADGPA 106
++ V VNG PGP + GD+ + V+ ++ N+ SIHWHG Q + WADGPA
Sbjct: 21 SRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPA 80
Query: 107 YITQCPIQTGQGCVYNFTIVGQRG 130
+I QCPI G +Y+F + Q G
Sbjct: 81 FINQCPISPGHSFLYDFQVPDQAG 104
>pdb|3FPX|A Chain A, Native Fungus Laccase From Trametes Hirsuta
pdb|3V9C|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta At
Low Dose Of Ionization Radiation
Length = 499
Score = 74.7 bits (182), Expect = 2e-14, Method: Composition-based stats.
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
Query: 52 TKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNI-----SIHWHGIGQLRSGWADGPA 106
++ V VNG PGP + GD+ + V+ ++ N+ SIHWHG Q + WADGPA
Sbjct: 21 SRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPA 80
Query: 107 YITQCPIQTGQGCVYNFTIVGQRG 130
+I QCPI G +Y+F + Q G
Sbjct: 81 FINQCPISPGHSFLYDFQVPDQAG 104
>pdb|3DIV|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a
Resolution
Length = 499
Score = 73.9 bits (180), Expect = 3e-14, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
Query: 52 TKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNI-----SIHWHGIGQLRSGWADGPA 106
++ V VNG PGP + GD+ + V+ ++ N+ S+HWHG Q + WADGPA
Sbjct: 21 SRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKTTSVHWHGFFQQGTNWADGPA 80
Query: 107 YITQCPIQTGQGCVYNFTIVGQRG 130
+I QCPI G +Y+F + Q G
Sbjct: 81 FINQCPISPGHSFLYDFQVPNQAG 104
>pdb|2H5U|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.9a
Resolution
Length = 499
Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 52 TKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNI-----SIHWHGIGQLRSGWADGPA 106
++ V VNG PGP + GD+ + V+ ++ N+ S+HWHG Q + WADGPA
Sbjct: 21 SRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKTTSVHWHGFFQQGTNWADGPA 80
Query: 107 YITQCPIQTGQGCVYNFTIVGQRGKL 132
+I QCPI G +Y+F + Q G
Sbjct: 81 FINQCPISPGHSFLYDFQVPNQAGTF 106
>pdb|2XYB|A Chain A, Crystal Structure Of A Fully Functional Laccase From The
Ligninolytic Fungus Pycnoporus Cinnabarinus
Length = 497
Score = 73.6 bits (179), Expect = 4e-14, Method: Composition-based stats.
Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 53 KSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNI-----SIHWHGIGQLRSGWADGPAY 107
+ V VNG P P I +GD+ + V+ + N+ SIHWHG Q + WADGPA+
Sbjct: 22 REAVVVNGITPAPLITGNKGDRFQLNVIDQLTNHTMLKTSSIHWHGFFQQGTNWADGPAF 81
Query: 108 ITQCPIQTGQGCVYNFTIVGQRG 130
+ QCPI +G +Y+F + Q G
Sbjct: 82 VNQCPIASGHSFLYDFQVPDQAG 104
>pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|B Chain B, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|C Chain C, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6W|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6X|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6Z|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T71|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
Length = 495
Score = 70.5 bits (171), Expect = 4e-13, Method: Composition-based stats.
Identities = 35/80 (43%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 56 VSVNGKFPGPRIVAREGDQLLIKVVKHVQN-----NISIHWHGIGQLRSGWADGPAYITQ 110
V+ G FPGP I GD I + + SIHWHG Q + WADGPA+ITQ
Sbjct: 26 VNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFITQ 85
Query: 111 CPIQTGQGCVYNFTIVGQRG 130
CPI G YNF + G G
Sbjct: 86 CPIIVGNSFSYNFNVPGMAG 105
>pdb|1ZPU|A Chain A, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|B Chain B, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|C Chain C, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|D Chain D, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|E Chain E, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|F Chain F, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
Length = 534
Score = 65.5 bits (158), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 52 TKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQN-NISIHWHGIGQLRSGWADGPAYITQ 110
++ +++ NG+FP P I +GD++ I + + N N S+H+HG+ Q + DG ++TQ
Sbjct: 21 SRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQ 80
Query: 111 CPIQTGQGCVYNFTI 125
CPI G +YNFT+
Sbjct: 81 CPIAPGSTMLYNFTV 95
>pdb|1HFU|A Chain A, Type-2 Cu-Depleted Laccase From Coprinus Cinereus At 1.68
A Resolution
Length = 503
Score = 57.4 bits (137), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 52 TKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNI-----SIHWHGIGQLRSGWADGPA 106
T++ + VNG GP I + D + VV + N SIHWHG+ Q + WADG
Sbjct: 22 TRAGILVNG-VHGPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGAD 80
Query: 107 YITQCPIQTGQGCVYNFTIVGQRG 130
+ QCPI G +Y FT G G
Sbjct: 81 GVNQCPISPGHAFLYKFTPAGHAG 104
>pdb|1A65|A Chain A, Type-2 Cu-depleted Laccase From Coprinus Cinereus
Length = 504
Score = 57.4 bits (137), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 52 TKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNI-----SIHWHGIGQLRSGWADGPA 106
T++ + VNG GP I + D + VV + N SIHWHG+ Q + WADG
Sbjct: 22 TRAGILVNG-VHGPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGAD 80
Query: 107 YITQCPIQTGQGCVYNFTIVGQRG 130
+ QCPI G +Y FT G G
Sbjct: 81 GVNQCPISPGHAFLYKFTPAGHAG 104
>pdb|1V10|A Chain A, Structure Of Rigidoporus Lignosus Laccase From
Hemihedrally Twinned Crystals
Length = 521
Score = 56.2 bits (134), Expect = 7e-09, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 8/120 (6%)
Query: 19 SFIALCLLAEPAFGITRHCKFDIKLQNAT---RLCHTKSIVSVNGKFPGPRIVAREGDQL 75
S +L +L+ + + D+ + NA +S V+ G P I D+
Sbjct: 6 SLKSLVVLSLTSLSLAATVALDLHILNANLDPDGTGARSAVTAEGTTIAPLITGNIDDRF 65
Query: 76 LIKVVKHVQNN-----ISIHWHGIGQLRSGWADGPAYITQCPIQTGQGCVYNFTIVGQRG 130
I V+ + + SIHWHG Q + DGPA++ QCPI + VY+F + GQ G
Sbjct: 66 QINVIDQLTDANMRRATSIHWHGFFQAGTTEMDGPAFVNQCPIIPNESFVYDFVVPGQAG 125
>pdb|2Q9O|A Chain A, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|2Q9O|B Chain B, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|3FU7|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU8|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
pdb|3FU8|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
Length = 559
Score = 55.1 bits (131), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 53 KSIVSVNGKFPGPRIVAREGDQLLIKVVKH-VQNNISIHWHGIGQLRSGWADGPAYITQC 111
+ ++ +NG GP IVA GD + + V+ + V N SIHWHGI Q + DG +T+C
Sbjct: 55 EKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGANGVTEC 114
Query: 112 PI 113
PI
Sbjct: 115 PI 116
>pdb|1GW0|A Chain A, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|1GW0|B Chain B, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|2IH8|A Chain A, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH8|B Chain B, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH9|A Chain A, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|2IH9|B Chain B, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|3FU7|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU9|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3FU9|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3QPK|A Chain A, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
pdb|3QPK|B Chain B, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
Length = 559
Score = 54.7 bits (130), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 53 KSIVSVNGKFPGPRIVAREGDQLLIKVVKH-VQNNISIHWHGIGQLRSGWADGPAYITQC 111
+ ++ +NG GP IVA GD + + V+ + V N SIHWHGI Q + DG +T+C
Sbjct: 55 EKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIHQKDTNLHDGANGVTEC 114
Query: 112 PI 113
PI
Sbjct: 115 PI 116
>pdb|3DKH|A Chain A, L559a Mutant Of Melanocarpus Albomyces Laccase
pdb|3DKH|B Chain B, L559a Mutant Of Melanocarpus Albomyces Laccase
Length = 559
Score = 54.7 bits (130), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 53 KSIVSVNGKFPGPRIVAREGDQLLIKVVKH-VQNNISIHWHGIGQLRSGWADGPAYITQC 111
+ ++ +NG GP IVA GD + + V+ + V N SIHWHGI Q + DG +T+C
Sbjct: 55 EKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIHQKDTNLHDGANGVTEC 114
Query: 112 PI 113
PI
Sbjct: 115 PI 116
>pdb|3PPS|A Chain A, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|B Chain B, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|C Chain C, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|D Chain D, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
Length = 604
Score = 50.8 bits (120), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 55 IVSVNGKFPGPRIVAREGDQLLIKVVKHVQNN-ISIHWHGIGQLRSGWADGPAYITQCPI 113
++ VN K GP I A GD + + V+ +++ N S+HWHG+ QL + + DG +T+CPI
Sbjct: 98 VMLVNDKIIGPTIRANWGDNIEVTVINNLKTNGTSMHWHGLRQLGNVFNDGANGVTECPI 157
>pdb|3G5W|A Chain A, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|B Chain B, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|C Chain C, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|D Chain D, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|E Chain E, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|F Chain F, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
Length = 318
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 9/92 (9%)
Query: 38 KFDIKLQNA------TRLCHTKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNISIHW 91
+FD+ +++ R HT + NG+ P P I EGD + + V +IHW
Sbjct: 4 EFDLSIEDTRIVLVGKRDFHT---FAFNGQVPAPLIHVMEGDDVTVNVTNMTTLPHTIHW 60
Query: 92 HGIGQLRSGWADGPAYITQCPIQTGQGCVYNF 123
HG+ Q + +DG + TQ I+ G Y F
Sbjct: 61 HGMLQRGTWQSDGVPHATQHAIEPGDTFTYKF 92
>pdb|3ZX1|A Chain A, Multicopper Oxidase From Campylobacter Jejuni: A
Metallo-Oxidase
Length = 481
Score = 42.7 bits (99), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Query: 36 HCKFDIKLQNATRLCHTKSIV--SVNGKFPGPRIVAREGDQLLIKVVKHVQNNISIHWHG 93
H +IK +N L K + + NG P P+I EGD+L I V ++ +IHWHG
Sbjct: 52 HATLEIK-ENHIELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHG 110
Query: 94 IGQLRSGWADGPAYITQCPIQTGQGCVYNFTI 125
+ DG + PI G+ +Y F I
Sbjct: 111 VPVPPD--QDGSPH---DPILAGEERIYRFEI 137
>pdb|3GDC|A Chain A, Crystal Structure Of Multicopper Oxidase
pdb|3GDC|B Chain B, Crystal Structure Of Multicopper Oxidase
pdb|3GDC|C Chain C, Crystal Structure Of Multicopper Oxidase
Length = 288
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 57 SVNGKFPGPRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPAYITQCPIQTG 116
S NG+ PGP + AREGD L I + +IH+HG+ + DG I I G
Sbjct: 58 SYNGRIPGPTLWAREGDALRIHFTNAGAHPHTIHFHGVHRAT---MDGTPGIGAGSIAPG 114
Query: 117 QGCVYNF 123
Q Y F
Sbjct: 115 QSFTYEF 121
>pdb|2XU9|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27
pdb|2XUW|A Chain A, Crystal Structure Of Apolaccase From Thermus Thermophilus
Hb27
pdb|2XVB|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 5 Min. In 5 Mm Hgcl2 At 278 K.
pdb|4AI7|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 2 H In 5 Mm Hgcl2 At 278 K.
pdb|2YAE|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27(0.0-12.5 Percent Dose)
pdb|2YAF|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (12.5-25.0 Percent Dose)
pdb|2YAH|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (25.0-37.5 Percent Dose)
pdb|2YAM|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (37.5-50.0 Percent Dose)
pdb|2YAO|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (50.0-62.5 Percent Dose)
pdb|2YAP|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (62.5-75.0 Percent Dose)
pdb|2YAQ|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (75.0-87.5 Percent Dose)
pdb|2YAR|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (87.5-100.0 Percent Dose)
Length = 439
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 6/72 (8%)
Query: 54 SIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPAYITQCPI 113
++++ G FPGP + R D + + + + ++HWHG+ S D P I
Sbjct: 36 TLLTYGGSFPGPTLRVRPRDTVRLTLENRLPEPTNLHWHGLPI--SPKVDDPF----LEI 89
Query: 114 QTGQGCVYNFTI 125
G+ Y FT+
Sbjct: 90 PPGESWTYEFTV 101
>pdb|3CG8|A Chain A, Laccase From Streptomyces Coelicolor
pdb|3CG8|B Chain B, Laccase From Streptomyces Coelicolor
pdb|3CG8|C Chain C, Laccase From Streptomyces Coelicolor
Length = 343
Score = 34.3 bits (77), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 52/123 (42%), Gaps = 9/123 (7%)
Query: 3 ASLMQSLSPGLKGILCSFIALCLLAEPAFGITRHCK-FDIKLQNATR-LCHTKSIVSVNG 60
A+ S++P + G + + PA G RH K + KL + K SV
Sbjct: 17 AATSLSIAPEVAGAAPAAKGITARTAPAGGEVRHLKMYAEKLADGQMGYGFEKGKASV-- 74
Query: 61 KFPGPRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPAYITQCPIQTGQGCV 120
PGP I EGD L I+ + S+H HG+ S +DG A + + ++ G
Sbjct: 75 --PGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEIS--SDGTA-MNKSDVEPGGTRT 129
Query: 121 YNF 123
Y +
Sbjct: 130 YTW 132
>pdb|1NDR|A Chain A, Crystallographic Structure Of A Blue Copper Nitrite
Reductase From Alcaligenes Xylosoxidans
pdb|1NDR|B Chain B, Crystallographic Structure Of A Blue Copper Nitrite
Reductase From Alcaligenes Xylosoxidans
pdb|1NDR|C Chain C, Crystallographic Structure Of A Blue Copper Nitrite
Reductase From Alcaligenes Xylosoxidans
pdb|1NDS|A Chain A, Crystallographic Structure Of A Substrate Bound Blue
Copper Nitrite Reductase From Alcaligenes Xylosoxidans
pdb|1NDS|B Chain B, Crystallographic Structure Of A Substrate Bound Blue
Copper Nitrite Reductase From Alcaligenes Xylosoxidans
pdb|1NDS|C Chain C, Crystallographic Structure Of A Substrate Bound Blue
Copper Nitrite Reductase From Alcaligenes Xylosoxidans
Length = 330
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
Query: 12 GLKGILCSFIALCLL---AEPAFGITRHCKFDIKLQNATRLCH----TKSIVSVNGKFPG 64
GL + +A L+ ++ A G + +F + ++ + T ++ NG PG
Sbjct: 1 GLPRVAVDLVAPPLVHPHSQVAAGAPKVVQFRMSIEEKKMVADDDGTTAQAMTFNGSVPG 60
Query: 65 PRIVAREGDQLLIKVVKHVQNNI 87
P +V EGD + + +V N++
Sbjct: 61 PTLVVHEGDYIELTLVNPATNSM 83
>pdb|2XX0|A Chain A, Structure Of The N90s-H254f Mutant Of Nitrite Reductase
From Alcaligenes Xylosoxidans
pdb|2XX0|B Chain B, Structure Of The N90s-H254f Mutant Of Nitrite Reductase
From Alcaligenes Xylosoxidans
Length = 336
Score = 30.8 bits (68), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 52 TKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNI--SIHWHG 93
T ++ NG PGP +V EGD + + +V N + S+ +HG
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHSVDFHG 95
>pdb|2XXG|A Chain A, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans
pdb|2XXG|C Chain C, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans
Length = 336
Score = 30.8 bits (68), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 52 TKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNI--SIHWHG 93
T ++ NG PGP +V EGD + + +V N + S+ +HG
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHSVDFHG 95
>pdb|2XX1|A Chain A, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XX1|B Chain B, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XX1|C Chain C, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XX1|D Chain D, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XX1|E Chain E, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XX1|F Chain F, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
Length = 336
Score = 30.8 bits (68), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 52 TKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNI--SIHWHG 93
T ++ NG PGP +V EGD + + +V N + S+ +HG
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHSVDFHG 95
>pdb|2R7E|A Chain A, Crystal Structure Analysis Of Coagulation Factor Viii
Length = 742
Score = 30.8 bits (68), Expect = 0.40, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Query: 64 GPRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWA----DGPAYITQCPIQTGQGC 119
GP + GD LLI +I+ HGI +R ++ G ++ PI G+
Sbjct: 451 GPLLYGEVGDTLLIIFKNQASRPYNIYPHGITDVRPLYSRRLPKGVKHLKDFPILPGEIF 510
Query: 120 VYNFTIVGQRGKLSPNP 136
Y +T+ + G +P
Sbjct: 511 KYKWTVTVEDGPTKSDP 527
>pdb|3CDZ|A Chain A, Crystal Structure Of Human Factor Viii
Length = 754
Score = 30.8 bits (68), Expect = 0.40, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Query: 64 GPRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWA----DGPAYITQCPIQTGQGC 119
GP + GD LLI +I+ HGI +R ++ G ++ PI G+
Sbjct: 450 GPLLYGEVGDTLLIIFKNQASRPYNIYPHGITDVRPLYSRRLPKGVKHLKDFPILPGEIF 509
Query: 120 VYNFTIVGQRGKLSPNP 136
Y +T+ + G +P
Sbjct: 510 KYKWTVTVEDGPTKSDP 526
>pdb|4ALO|A Chain A, Structure And Properties Of H1 Crustacyanin From Lobster
Homarus Americanus
pdb|4ALO|B Chain B, Structure And Properties Of H1 Crustacyanin From Lobster
Homarus Americanus
Length = 181
Score = 30.0 bits (66), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 115 TGQGCVYNFTIVGQRGKLSPNPFAEPY 141
T G Y+ ++ + GKL PNPF EP+
Sbjct: 66 TSTGIAYDGNLLKRNGKLYPNPFGEPH 92
>pdb|1NDT|A Chain A, Nitrite Reductase From Alcaligenes Xylosoxidans
Length = 336
Score = 29.6 bits (65), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 52 TKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNI--SIHWHG 93
T ++ NG PGP +V EGD + + +V N + ++ +HG
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG 95
>pdb|1GS8|A Chain A, Crystal Structure Of Mutant D92n Alcaligenes
Xylosoxidans Nitrite Reductase
Length = 336
Score = 29.6 bits (65), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 52 TKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNI--SIHWHG 93
T ++ NG PGP +V EGD + + +V N + ++++HG
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVNFHG 95
>pdb|1PF3|A Chain A, Crystal Structure Of The M441l Mutant Of The Multicopper
Oxidase Cueo
Length = 498
Score = 29.6 bits (65), Expect = 0.76, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 20/43 (46%)
Query: 52 TKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNISIHWHGI 94
T + NG GP + + G + + + + ++HWHG+
Sbjct: 35 TATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGL 77
>pdb|3UAA|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data1)
pdb|3UAB|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data2)
pdb|3UAC|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data4)
pdb|3UAD|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data5)
pdb|3UAE|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data6)
Length = 489
Score = 29.6 bits (65), Expect = 0.76, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 20/43 (46%)
Query: 52 TKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNISIHWHGI 94
T + NG GP + + G + + + + ++HWHG+
Sbjct: 35 TATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGL 77
>pdb|3QQX|A Chain A, Reduced Native Intermediate Of The Multicopper Oxidase
Cueo
Length = 505
Score = 29.6 bits (65), Expect = 0.76, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 20/43 (46%)
Query: 52 TKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNISIHWHGI 94
T + NG GP + + G + + + + ++HWHG+
Sbjct: 35 TATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGL 77
>pdb|3NSF|A Chain A, Apo Form Of The Multicopper Oxidase Cueo
Length = 505
Score = 29.6 bits (65), Expect = 0.76, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 20/43 (46%)
Query: 52 TKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNISIHWHGI 94
T + NG GP + + G + + + + ++HWHG+
Sbjct: 35 TATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGL 77
>pdb|3NSC|A Chain A, C500s Mutant Of Cueo Bound To Cu(Ii)
pdb|3NT0|A Chain A, C500s (T1d) Mutant Of Cueo Soaked In And Bound To Cu(I)
Length = 505
Score = 29.6 bits (65), Expect = 0.76, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 20/43 (46%)
Query: 52 TKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNISIHWHGI 94
T + NG GP + + G + + + + ++HWHG+
Sbjct: 35 TATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGL 77
>pdb|1KV7|A Chain A, Crystal Structure Of Cueo, A Multi-Copper Oxidase From
E. Coli Involved In Copper Homeostasis
pdb|1N68|A Chain A, Copper Bound To The Multicopper Oxidase Cueo
pdb|2FQD|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under
Different Copper Binding Situations
pdb|2FQE|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under
Different Copper Binding Situations
pdb|2FQF|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under
Different Copper Binding Situations
pdb|2FQG|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under
Different Copper Binding Situations
pdb|3NSD|A Chain A, Silver Bound To The Multicopper Oxidase Cueo (Untagged)
pdb|3OD3|A Chain A, Cueo At 1.1 A Resolution Including Residues In
Previously Disordered Region
pdb|3PAU|A Chain A, Cueo In The Resting Oxidized State
pdb|3PAV|A Chain A, The Reduced Form Of Cueo
Length = 488
Score = 29.6 bits (65), Expect = 0.76, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 20/43 (46%)
Query: 52 TKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNISIHWHGI 94
T + NG GP + + G + + + + ++HWHG+
Sbjct: 35 TATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGL 77
>pdb|2YXV|A Chain A, The Deletion Mutant Of Multicopper Oxidase Cueo
pdb|2YXV|B Chain B, The Deletion Mutant Of Multicopper Oxidase Cueo
pdb|2YXW|A Chain A, The Deletion Mutant Of Multicopper Oxidase Cueo
pdb|2YXW|B Chain B, The Deletion Mutant Of Multicopper Oxidase Cueo
Length = 446
Score = 29.6 bits (65), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 10/43 (23%), Positives = 20/43 (46%)
Query: 52 TKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNISIHWHGI 94
T + NG GP + + G + + + + ++HWHG+
Sbjct: 35 TATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGL 77
>pdb|1OE2|A Chain A, Atomic Resolution Structure Of D92e Mutant Of
Alcaligenes Xylosoxidans Nitrite Reductase
Length = 336
Score = 29.6 bits (65), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 52 TKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNI--SIHWHG 93
T ++ NG PGP +V EGD + + +V N + ++ +HG
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVEFHG 95
>pdb|3NSY|A Chain A, The Multi-Copper Oxidase Cueo With Six Met To Ser
Mutations (M358s, M361s,M362s,M364s,M366s,M368s)
Length = 511
Score = 29.6 bits (65), Expect = 0.83, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 20/43 (46%)
Query: 52 TKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNISIHWHGI 94
T + NG GP + + G + + + + ++HWHG+
Sbjct: 35 TATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGL 77
>pdb|2VMJ|A Chain A, Type 1 Copper-Binding Loop Of Nitrite Reductase Mutant:
130- Capegmvpwhvvsgm-144 To 130-Ctphpfm-136
Length = 329
Score = 29.6 bits (65), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 52 TKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNI--SIHWHG 93
T ++ NG PGP +V EGD + + +V N + ++ +HG
Sbjct: 53 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG 96
>pdb|2XXF|A Chain A, Cu Metallated H254f Mutant Of Nitrite Reductase
pdb|2XXF|B Chain B, Cu Metallated H254f Mutant Of Nitrite Reductase
Length = 336
Score = 29.6 bits (65), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 52 TKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNI--SIHWHG 93
T ++ NG PGP +V EGD + + +V N + ++ +HG
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG 95
>pdb|1GS7|A Chain A, Crystal Structure Of H254f Mutant Of Alcaligenes
Xylosoxidans Nitrite Reductase
Length = 336
Score = 29.3 bits (64), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 52 TKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNI--SIHWHG 93
T ++ NG PGP +V EGD + + +V N + ++ +HG
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG 95
>pdb|1WA1|X Chain X, Crystal Structure Of H313q Mutant Of Alcaligenes
Xylosoxidans Nitrite Reductase
pdb|1WA2|X Chain X, Crystal Structure Of H313q Mutant Of Alcaligenes
Xylosoxidans Nitrite Reductase With Nitrite Bound
Length = 336
Score = 29.3 bits (64), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 52 TKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNI--SIHWHG 93
T ++ NG PGP +V EGD + + +V N + ++ +HG
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG 95
>pdb|1WA0|X Chain X, Crystal Structure Of W138h Mutant Of Alcaligenes
Xylosoxidans Nitrite Reductase
Length = 336
Score = 29.3 bits (64), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 52 TKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNI--SIHWHG 93
T ++ NG PGP +V EGD + + +V N + ++ +HG
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG 95
>pdb|1WAE|A Chain A, Crystal Structure Of H129v Mutant Of Alcaligenes
Xylosoxidans Nitrite Reductase
Length = 336
Score = 29.3 bits (64), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 52 TKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNI--SIHWHG 93
T ++ NG PGP +V EGD + + +V N + ++ +HG
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG 95
>pdb|4GY4|A Chain A, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GY4|B Chain B, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GY4|C Chain C, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
Length = 278
Score = 29.3 bits (64), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 42/97 (43%), Gaps = 9/97 (9%)
Query: 29 PAFGITRHCK-FDIKLQNATR-LCHTKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNN 86
PA G RH K + KL + K SV PGP I EGD L I+ +
Sbjct: 5 PAGGEVRHLKMYAEKLADGQMGYGFEKGKASV----PGPLIEVNEGDTLHIEFTNTMDVR 60
Query: 87 ISIHWHGIGQLRSGWADGPAYITQCPIQTGQGCVYNF 123
S+H HG+ S +DG A + + ++ G Y +
Sbjct: 61 ASLHVHGLDAEIS--SDGTA-MNKSDVEPGGTRTYTW 94
>pdb|1BQ5|A Chain A, Nitrite Reductase From Alcaligenes Xylosoxidans Gifu 1051
Length = 342
Score = 29.3 bits (64), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 52 TKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNI--SIHWHG 93
T ++ NG PGP +V EGD + + +V N + ++ +HG
Sbjct: 58 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG 101
>pdb|1OE1|A Chain A, Atomic Resolution Structure Of The Wildtype Native
Nitrite Reductase From Alcaligenes Xylosoxidans
pdb|1OE3|A Chain A, Atomic Resolution Structure Of 'half Apo' Nir
Length = 336
Score = 29.3 bits (64), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 52 TKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNI--SIHWHG 93
T ++ NG PGP +V EGD + + +V N + ++ +HG
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG 95
>pdb|2VN3|A Chain A, Nitrite Reductase From Alcaligenes Xylosoxidans
Length = 337
Score = 29.3 bits (64), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 52 TKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNI--SIHWHG 93
T ++ NG PGP +V EGD + + +V N + ++ +HG
Sbjct: 53 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG 96
>pdb|2JFC|A Chain A, M144l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans In Space Group P212121
pdb|2JFC|B Chain B, M144l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans In Space Group P212121
pdb|2JFC|C Chain C, M144l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans In Space Group P212121
pdb|2JFC|D Chain D, M144l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans In Space Group P212121
pdb|2JFC|E Chain E, M144l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans In Space Group P212121
pdb|2JFC|F Chain F, M144l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans In Space Group P212121
Length = 335
Score = 29.3 bits (64), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 52 TKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNI--SIHWHG 93
T ++ NG PGP +V EGD + + +V N + ++ +HG
Sbjct: 51 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG 94
>pdb|1HAU|A Chain A, X-Ray Structure Of A Blue Copper Nitrite Reductase At
High Ph And In Copper Free Form At 1.9 A Resolution
pdb|1HAW|A Chain A, X-Ray Structure Of A Blue Copper Nitrite Reductase At
High Ph And In Copper Free Form At 1.9a Resolution
pdb|2VM3|A Chain A, Structure Of Alcaligenes Xylosoxidans In Space Group R3
- 1 Of 2
pdb|2VM4|A Chain A, Structure Of Alcaligenes Xylosoxidans Nitrite Reductase
In Space Group R3 - 2 Of 2
pdb|2VW4|A Chain A, Nitrite Reductase From Alcaligenes Xylosoxidans - 2 Of 3
pdb|2VW4|B Chain B, Nitrite Reductase From Alcaligenes Xylosoxidans - 2 Of 3
pdb|2VW6|A Chain A, Nitrite Reductase From Alcaligenes Xylosoxidans - 3 Of 3
pdb|2VW6|B Chain B, Nitrite Reductase From Alcaligenes Xylosoxidans - 3 Of 3
pdb|2VW7|A Chain A, Nitrite Reductase From Alcaligenes Xylosoxidans - 1 Of 3
pdb|2VW7|B Chain B, Nitrite Reductase From Alcaligenes Xylosoxidans - 1 Of 3
pdb|2ZON|A Chain A, Crystal Structure Of Electron Transfer Complex Of
Nitrite Reductase With Cytochrome C
pdb|2ZON|B Chain B, Crystal Structure Of Electron Transfer Complex Of
Nitrite Reductase With Cytochrome C
pdb|2ZON|C Chain C, Crystal Structure Of Electron Transfer Complex Of
Nitrite Reductase With Cytochrome C
Length = 336
Score = 29.3 bits (64), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 52 TKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNI--SIHWHG 93
T ++ NG PGP +V EGD + + +V N + ++ +HG
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG 95
>pdb|2XWZ|A Chain A, Structure Of The Recombinant Native Nitrite Reductase
From Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XWZ|B Chain B, Structure Of The Recombinant Native Nitrite Reductase
From Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XWZ|C Chain C, Structure Of The Recombinant Native Nitrite Reductase
From Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XWZ|D Chain D, Structure Of The Recombinant Native Nitrite Reductase
From Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XWZ|E Chain E, Structure Of The Recombinant Native Nitrite Reductase
From Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XWZ|F Chain F, Structure Of The Recombinant Native Nitrite Reductase
From Alcaligenes Xylosoxidans Complexed With Nitrite
Length = 336
Score = 29.3 bits (64), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 52 TKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNI--SIHWHG 93
T ++ NG PGP +V EGD + + +V N + ++ +HG
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG 95
>pdb|2BP0|A Chain A, M168l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans
Length = 336
Score = 29.3 bits (64), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 52 TKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNI--SIHWHG 93
T ++ NG PGP +V EGD + + +V N + ++ +HG
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG 95
>pdb|2BP0|B Chain B, M168l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans
Length = 336
Score = 29.3 bits (64), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 52 TKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNI--SIHWHG 93
T ++ NG PGP +V EGD + + +V N + ++ +HG
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG 95
>pdb|1GS6|X Chain X, Crystal Structure Of M144a Mutant Of Alcaligenes
Xylosoxidans Nitrite Reductase
Length = 336
Score = 29.3 bits (64), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 52 TKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNI--SIHWHG 93
T ++ NG PGP +V EGD + + +V N + ++ +HG
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG 95
>pdb|2BO0|A Chain A, Crystal Structure Of The C130a Mutant Of Nitrite
Reductase From Alcaligenes Xylosoxidans
Length = 336
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 52 TKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNI--SIHWHG 93
T ++ NG PGP +V EGD + + +V N + ++ +HG
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG 95
>pdb|2BP8|A Chain A, M168q Structure Of Nitrite Reductase From Alcaligenes
Xylosoxidans
Length = 336
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 52 TKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNI--SIHWHG 93
T ++ NG PGP +V EGD + + +V N + ++ +HG
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG 95
>pdb|2BP8|B Chain B, M168q Structure Of Nitrite Reductase From Alcaligenes
Xylosoxidans
Length = 336
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 52 TKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNI--SIHWHG 93
T ++ NG PGP +V EGD + + +V N + ++ +HG
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG 95
>pdb|3KW8|A Chain A, Two-Domain Laccase From Streptomyces Coelicolor At 2.3 A
Resolution
Length = 276
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 42/97 (43%), Gaps = 9/97 (9%)
Query: 29 PAFGITRHCK-FDIKLQNATR-LCHTKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNN 86
PA G RH K + KL + K SV PGP I EGD L I+ +
Sbjct: 2 PAGGEVRHLKMYAEKLADGQMGYGFEKGKASV----PGPLIEVNEGDTLHIEFTNTMDVR 57
Query: 87 ISIHWHGIGQLRSGWADGPAYITQCPIQTGQGCVYNF 123
S+H HG+ S +DG A + + ++ G Y +
Sbjct: 58 ASLHVHGLDYEIS--SDGTA-MNKSDVEPGGTRTYTW 91
>pdb|4GXF|A Chain A, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From
Streptomyces Coelicolor
pdb|4GXF|B Chain B, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From
Streptomyces Coelicolor
pdb|4GXF|C Chain C, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From
Streptomyces Coelicolor
Length = 279
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 6/68 (8%)
Query: 29 PAFGITRHCK-FDIKLQNATR-LCHTKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNN 86
PA G RH K + KL + K SV PGP I EGD L I+ +
Sbjct: 6 PAGGEVRHLKMYAEKLADGQMGYGFEKGKASV----PGPLIEVNEGDTLHIEFTNTMDVR 61
Query: 87 ISIHWHGI 94
S+H HG+
Sbjct: 62 ASLHVHGL 69
>pdb|1I4U|A Chain A, The C1 Subunit Of Alpha-Crustacyanin
pdb|1I4U|B Chain B, The C1 Subunit Of Alpha-Crustacyanin
pdb|1OBQ|A Chain A, Apocrustacyanin C1 Crystals Grown In Space And Earth Using
Vapour Diffusion Geometry
pdb|1OBQ|B Chain B, Apocrustacyanin C1 Crystals Grown In Space And Earth Using
Vapour Diffusion Geometry
pdb|1OBU|A Chain A, Apocrustacyanin C1 Crystals Grown In Space And Earth Using
Vapour Diffusion Geometry
pdb|1OBU|B Chain B, Apocrustacyanin C1 Crystals Grown In Space And Earth Using
Vapour Diffusion Geometry
Length = 181
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 5/39 (12%)
Query: 103 DGPAYITQCPIQTGQGCVYNFTIVGQRGKLSPNPFAEPY 141
DG ++ + G Y+ ++ + GKL PNPF EP+
Sbjct: 59 DGKQFVIE-----STGIAYDGNLLKRNGKLYPNPFGEPH 92
>pdb|1S2P|A Chain A, The Structure And Refinement Of Apocrustacyanin C2 To 1.3a
Resolution And The Search For Differences Between This
Protein And The Homologous Apoproteins A1 And C1
pdb|1S2P|B Chain B, The Structure And Refinement Of Apocrustacyanin C2 To 1.3a
Resolution And The Search For Differences Between This
Protein And The Homologous Apoproteins A1 And C1
Length = 181
Score = 28.5 bits (62), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 118 GCVYNFTIVGQRGKLSPNPFAEPY 141
G Y+ ++ + GKL PNPF EP+
Sbjct: 69 GIAYDGNLLKRNGKLYPNPFGEPH 92
>pdb|1H91|A Chain A, The Crystal Structure Of Lobster Apocrustacyanin A1 Using
Softer X-Rays.
pdb|1H91|B Chain B, The Crystal Structure Of Lobster Apocrustacyanin A1 Using
Softer X-Rays.
pdb|1GKA|A Chain A, The Molecular Basis Of The Coloration Mechanism In Lobster
Shell. Beta-Crustacyanin At 3.2 A Resolution
pdb|1S44|A Chain A, The Structure And Refinement Of Apocrustacyanin C2 To 1.6a
Resolution And The Search For Differences Between This
Protein And The Homologous Apoproteins A1 And C1.
pdb|1S44|B Chain B, The Structure And Refinement Of Apocrustacyanin C2 To 1.6a
Resolution And The Search For Differences Between This
Protein And The Homologous Apoproteins A1 And C1
Length = 180
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 118 GCVYNFTIVGQRGKLSPNPFAEPY 141
G Y+ ++ + GKL PNPF EP+
Sbjct: 68 GIAYDGNLLKRNGKLYPNPFGEPH 91
>pdb|3T9W|A Chain A, Small Laccase From Amycolatopsis Sp. Atcc 39116
pdb|3TA4|F Chain F, Small Laccase From Amycolatopsis Sp. Atcc 39116
Complexed With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
pdb|3TA4|D Chain D, Small Laccase From Amycolatopsis Sp. Atcc 39116
Complexed With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
pdb|3TA4|E Chain E, Small Laccase From Amycolatopsis Sp. Atcc 39116
Complexed With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
Length = 299
Score = 27.7 bits (60), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 63 PGPRIVAREGDQLLIKVVKHVQNNISIHWHGI 94
PGP + EGD L I +V +S+H HG+
Sbjct: 56 PGPVLEMWEGDTLEIDLVNTTDRVLSLHPHGV 87
>pdb|3AW5|A Chain A, Structure Of A Multicopper Oxidase From The
Hyperthermophilic Archaeon Pyrobaculum Aerophilum
Length = 448
Score = 27.3 bits (59), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 40/96 (41%), Gaps = 10/96 (10%)
Query: 43 LQNATRLCHTKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWA 102
++ AT + T S G P I+ R G ++ + + + +HWHG W
Sbjct: 17 IKEATYIEATASGYMAEGVL-NPTIILRRGQRVDMTLKNKLTEPTIVHWHG---FDVNWH 72
Query: 103 DG--PAYITQCPIQTGQGCVYNFTIVGQRGKLSPNP 136
+ P++ I G+ Y+F +V + G +P
Sbjct: 73 NDAHPSFA----ITPGESYNYSFDVVNRAGTYLYHP 104
>pdb|3ABG|A Chain A, X-Ray Crystal Analysis Of Bilirubin Oxidase From
Myrothecium Verrucaria At 2.3 Angstrom Resolution Using
A Twin Crystal
pdb|3ABG|B Chain B, X-Ray Crystal Analysis Of Bilirubin Oxidase From
Myrothecium Verrucaria At 2.3 Angstrom Resolution Using
A Twin Crystal
pdb|2XLL|A Chain A, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
pdb|2XLL|B Chain B, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
pdb|2XLL|C Chain C, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
pdb|2XLL|D Chain D, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
Length = 534
Score = 27.3 bits (59), Expect = 3.9, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 52 TKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRS--GWAD 103
+ +V +G PGP G + +++ + + + S+H HG + GWA+
Sbjct: 56 SADLVGYDGMSPGPTFQVPRGVETVVRFINNAEAPNSVHLHGSFSRAAFDGWAE 109
>pdb|3TAS|A Chain A, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TAS|B Chain B, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TAS|C Chain C, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TBB|A Chain A, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBB|B Chain B, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBB|C Chain C, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBC|A Chain A, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone.
pdb|3TBC|B Chain B, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone.
pdb|3TBC|C Chain C, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone
Length = 313
Score = 26.6 bits (57), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 62 FPGPRIVAREGDQLLIKVVKHVQNNISIHWHGI 94
PGP I EGD L I+ + +S+H HG+
Sbjct: 39 IPGPLIELNEGDTLHIEFENTMDVPVSLHVHGL 71
>pdb|2VRQ|A Chain A, Structure Of An Inactive Mutant Of Arabinofuranosidase
From Thermobacillus Xylanilyticus In Complex With A
Pentasaccharide
pdb|2VRQ|B Chain B, Structure Of An Inactive Mutant Of Arabinofuranosidase
From Thermobacillus Xylanilyticus In Complex With A
Pentasaccharide
pdb|2VRQ|C Chain C, Structure Of An Inactive Mutant Of Arabinofuranosidase
From Thermobacillus Xylanilyticus In Complex With A
Pentasaccharide
Length = 496
Score = 26.2 bits (56), Expect = 8.7, Method: Composition-based stats.
Identities = 33/150 (22%), Positives = 54/150 (36%), Gaps = 45/150 (30%)
Query: 35 RHCKFDIKLQNATRLCHTKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNISIH---- 90
RHC + R+ + +V+V ++ EG+++L+ HV N +H
Sbjct: 335 RHC-------DRVRMANIAQLVNVLQS-----VILTEGERMLLTPTYHVFNMFKVHQDAE 382
Query: 91 ----WHGI------GQL------RSGWADGPAYITQCPIQTGQGCVYNFTIVGQRGKLSP 134
W + G+L S ADG +I+ C + G + + G G +S
Sbjct: 383 LLDTWESVERTGPEGELPKVSVSASRAADGKIHISLCNLDFETGASVDIELRGLNGGVSA 442
Query: 135 -------------NPFAEPYKEVPLIFAIF 151
N F EP + P F F
Sbjct: 443 TGTTLTSGRIDGHNTFDEPERVKPAPFRDF 472
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.141 0.448
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,177,602
Number of Sequences: 62578
Number of extensions: 207745
Number of successful extensions: 441
Number of sequences better than 100.0: 84
Number of HSP's better than 100.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 341
Number of HSP's gapped (non-prelim): 89
length of query: 162
length of database: 14,973,337
effective HSP length: 91
effective length of query: 71
effective length of database: 9,278,739
effective search space: 658790469
effective search space used: 658790469
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 47 (22.7 bits)