Query 043378
Match_columns 162
No_of_seqs 183 out of 1260
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 07:12:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043378.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043378hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1v10_A Laccase; multicopper bl 100.0 2.3E-32 8E-37 241.6 12.4 104 29-132 18-127 (521)
2 3sqr_A Laccase; multicopper ox 100.0 1.8E-31 6.3E-36 239.0 17.1 101 31-132 64-165 (580)
3 1aoz_A Ascorbate oxidase; oxid 100.0 1.4E-31 4.8E-36 237.8 15.5 100 32-132 1-101 (552)
4 1zpu_A Iron transport multicop 100.0 1.4E-31 4.7E-36 237.4 15.1 115 33-148 1-139 (534)
5 3t6v_A Laccase; beta barrel, o 100.0 1.2E-30 4.2E-35 229.7 13.8 98 35-132 5-107 (495)
6 3pxl_A Laccase; 4-copper prote 100.0 1.7E-30 5.7E-35 229.1 13.0 99 34-132 3-106 (499)
7 2q9o_A Laccase-1; multicopper 100.0 2.3E-29 8E-34 224.1 14.9 101 31-132 30-135 (559)
8 3g5w_A Multicopper oxidase typ 100.0 7.1E-29 2.4E-33 207.5 15.3 99 33-132 1-100 (318)
9 1hfu_A Laccase 1; oxidoreducta 100.0 3.6E-29 1.2E-33 220.3 11.9 97 35-132 5-106 (503)
10 2zwn_A Two-domain type laccase 100.0 5.3E-28 1.8E-32 203.4 13.2 99 33-132 2-101 (339)
11 3gdc_A Multicopper oxidase; be 99.9 3.2E-27 1.1E-31 194.7 15.7 114 31-148 31-169 (288)
12 2uxt_A Protein SUFI, SUFI; oxi 99.9 2.1E-28 7E-33 213.0 8.0 95 33-132 17-112 (451)
13 3zx1_A Oxidoreductase, putativ 99.9 4.4E-27 1.5E-31 206.6 12.6 98 30-132 46-145 (481)
14 3gyr_A PHS, phenoxazinone synt 99.9 5.5E-27 1.9E-31 208.6 12.2 113 31-148 29-213 (612)
15 3od3_A Blue copper oxidase CUE 99.9 1.2E-26 4E-31 204.3 12.1 95 33-132 16-110 (488)
16 2xu9_A Laccase; oxidoreductase 99.9 2.3E-26 8E-31 199.1 12.9 96 31-132 13-109 (439)
17 2wsd_A Spore coat protein A; o 99.9 4.8E-26 1.6E-30 200.8 11.8 114 33-148 24-195 (513)
18 3kw8_A Laccase, putative coppe 99.9 6.8E-26 2.3E-30 185.7 10.9 93 30-127 3-95 (276)
19 3t9w_A Small laccase, multi-co 99.9 8.6E-26 3E-30 187.3 10.3 117 27-148 22-176 (299)
20 3abg_A Bilirubin oxidase; clea 99.9 3.6E-26 1.2E-30 202.9 8.4 95 33-132 35-131 (534)
21 2g23_A PHS, phenoxazinone synt 99.9 8.9E-25 3E-29 196.8 12.5 112 32-148 30-213 (612)
22 3tas_A Small laccase, multi-co 99.9 1.6E-24 5.6E-29 180.5 10.2 91 29-125 8-99 (313)
23 2j5w_A Ceruloplasmin, ferroxid 99.9 4.6E-24 1.6E-28 201.8 13.9 107 26-132 13-177 (1065)
24 1kbv_A ANIA, major outer membr 99.9 7.5E-23 2.6E-27 171.2 14.1 110 31-148 35-171 (327)
25 3aw5_A Multicopper oxidase; be 99.9 3.9E-24 1.3E-28 186.1 6.5 72 56-132 28-100 (448)
26 2zoo_A Probable nitrite reduct 99.9 5.3E-22 1.8E-26 171.3 14.7 111 30-148 24-161 (442)
27 1mzy_A Copper-containing nitri 99.9 1.3E-21 4.5E-26 163.5 11.2 96 31-132 29-125 (333)
28 1oe1_A Dissimilatory copper-co 99.9 3.1E-21 1.1E-25 161.3 12.5 96 31-132 29-126 (336)
29 2bw4_A Copper-containing nitri 99.8 4.9E-21 1.7E-25 160.3 10.7 97 30-132 34-132 (340)
30 3cg8_A Laccase; oxidoreductase 99.8 5.8E-21 2E-25 161.1 8.7 90 31-126 45-135 (343)
31 2r7e_B Coagulation factor VIII 99.8 4.4E-21 1.5E-25 176.5 7.0 101 30-132 129-273 (770)
32 1sdd_B Coagulation factor V; c 99.8 4.7E-20 1.6E-24 166.2 12.6 96 31-128 3-138 (647)
33 2r7e_A Coagulation factor VIII 99.8 5.6E-21 1.9E-25 175.2 -2.0 93 35-132 47-157 (742)
34 1sdd_A Coagulation factor V; c 99.8 2.7E-19 9.3E-24 148.4 7.9 72 55-129 51-130 (306)
35 2dv6_A Nitrite reductase; elec 99.7 3.2E-17 1.1E-21 141.3 14.2 110 31-148 160-296 (447)
36 2r7e_A Coagulation factor VIII 99.7 1.5E-18 5.1E-23 159.1 5.5 69 61-130 448-521 (742)
37 2j5w_A Ceruloplasmin, ferroxid 99.4 9.4E-14 3.2E-18 131.6 4.8 77 51-132 616-695 (1065)
38 2dv6_A Nitrite reductase; elec 99.3 4.7E-13 1.6E-17 115.2 5.0 86 31-132 25-110 (447)
39 3kw8_A Laccase, putative coppe 99.2 7.8E-11 2.7E-15 96.1 9.8 75 56-132 157-243 (276)
40 3cvb_A Plastocyanin; cupredoxi 99.1 2.8E-11 9.7E-16 84.3 1.6 73 61-136 15-89 (105)
41 1iby_A Nitrosocyanin; RED copp 99.0 1.3E-09 4.5E-14 77.2 6.6 85 35-133 2-92 (112)
42 3cg8_A Laccase; oxidoreductase 98.7 1.7E-08 5.7E-13 84.8 7.3 75 56-132 198-284 (343)
43 1fwx_A Nitrous oxide reductase 98.7 3.2E-08 1.1E-12 88.8 7.1 72 50-132 498-569 (595)
44 2cal_A Rusticyanin; iron respi 98.5 1.7E-07 5.8E-12 70.5 5.4 72 56-132 53-133 (154)
45 2ov0_A Amicyanin; beta-sandwic 98.4 1.1E-06 3.9E-11 61.4 7.4 66 59-136 27-92 (105)
46 1sdd_B Coagulation factor V; c 98.4 6.3E-07 2.1E-11 80.6 7.6 77 53-132 226-305 (647)
47 3gdc_A Multicopper oxidase; be 98.3 8E-07 2.7E-11 72.6 6.6 95 34-132 162-266 (288)
48 1sdd_A Coagulation factor V; c 98.3 5.9E-08 2E-12 80.0 -0.8 74 53-132 201-278 (306)
49 3g5w_A Multicopper oxidase typ 98.2 1.8E-06 6E-11 71.7 6.2 97 34-132 136-248 (318)
50 2zwn_A Two-domain type laccase 98.1 4.3E-06 1.5E-10 69.7 6.5 78 53-132 165-249 (339)
51 3t9w_A Small laccase, multi-co 98.1 1.8E-05 6E-10 65.1 9.8 76 56-132 179-265 (299)
52 3zx1_A Oxidoreductase, putativ 98.1 4.3E-06 1.5E-10 73.2 5.8 76 55-132 372-459 (481)
53 1kbv_A ANIA, major outer membr 98.0 7.3E-06 2.5E-10 68.0 6.5 77 54-132 199-284 (327)
54 3tas_A Small laccase, multi-co 98.0 2E-05 6.8E-10 65.0 8.2 76 56-132 163-249 (313)
55 2aan_A Auracyanin A; cupredoxi 98.0 2.8E-05 9.6E-10 56.7 7.6 74 62-136 32-123 (139)
56 2zoo_A Probable nitrite reduct 97.8 2.7E-05 9.1E-10 66.7 6.8 77 54-132 189-274 (442)
57 2gim_A Plastocyanin; beta shee 97.8 2.9E-05 1E-09 53.6 5.6 67 65-136 20-90 (106)
58 4hci_A Cupredoxin 1; structura 97.8 5.2E-05 1.8E-09 52.2 5.9 58 65-136 28-85 (100)
59 3c75_A Amicyanin; copper prote 97.7 4.6E-05 1.6E-09 55.5 5.8 64 61-136 56-119 (132)
60 2g23_A PHS, phenoxazinone synt 97.7 4.4E-05 1.5E-09 68.7 6.4 80 53-132 458-569 (612)
61 2uxt_A Protein SUFI, SUFI; oxi 97.7 0.00015 5E-09 62.7 9.2 95 34-132 152-264 (451)
62 2r7e_B Coagulation factor VIII 97.7 1.5E-05 5E-10 73.5 2.6 76 54-132 355-434 (770)
63 2xu9_A Laccase; oxidoreductase 97.5 0.00026 9E-09 60.7 7.6 76 55-132 335-418 (439)
64 1hfu_A Laccase 1; oxidoreducta 97.5 0.00024 8.1E-09 62.1 7.4 96 36-132 143-256 (503)
65 1v10_A Laccase; multicopper bl 97.5 0.00025 8.4E-09 62.3 7.4 78 54-132 192-283 (521)
66 1mzy_A Copper-containing nitri 97.5 0.00028 9.6E-09 58.3 7.3 74 54-132 210-295 (333)
67 2plt_A Plastocyanin; electron 97.4 0.00025 8.7E-09 48.0 5.7 65 65-136 18-83 (98)
68 1qhq_A Protein (auracyanin); e 97.4 0.001 3.5E-08 48.2 8.9 69 64-133 32-119 (140)
69 2bw4_A Copper-containing nitri 97.4 0.00048 1.6E-08 56.9 7.8 74 54-132 216-301 (340)
70 3pxl_A Laccase; 4-copper prote 97.3 0.00051 1.8E-08 60.2 7.4 79 53-132 166-257 (499)
71 2q9o_A Laccase-1; multicopper 97.3 0.00055 1.9E-08 60.7 7.2 78 54-132 196-286 (559)
72 3t6v_A Laccase; beta barrel, o 97.2 0.00071 2.4E-08 59.2 7.4 79 53-132 168-260 (495)
73 1zpu_A Iron transport multicop 97.2 0.002 6.7E-08 56.8 9.8 67 65-132 370-459 (534)
74 3od3_A Blue copper oxidase CUE 97.2 0.00061 2.1E-08 59.7 6.3 69 55-125 379-458 (488)
75 1bxv_A Plastocyanin; copper pr 97.1 0.00074 2.5E-08 44.9 5.3 55 65-133 19-73 (91)
76 1pcs_A Plastocyanin; electron 97.1 0.00024 8.3E-09 48.2 2.5 65 65-136 19-83 (98)
77 1b3i_A PETE protein, protein ( 97.1 0.00082 2.8E-08 45.4 5.0 66 65-140 19-86 (97)
78 1byp_A Protein (plastocyanin); 97.0 0.0017 5.8E-08 44.0 6.4 61 65-135 17-83 (99)
79 1plc_A Plastocyanin; electron 97.0 0.0019 6.5E-08 43.8 6.3 62 65-136 17-84 (99)
80 1oe1_A Dissimilatory copper-co 97.0 0.0018 6E-08 53.4 7.3 74 54-132 210-295 (336)
81 2wsd_A Spore coat protein A; o 96.9 0.0017 5.9E-08 56.8 7.1 79 54-132 384-488 (513)
82 1aoz_A Ascorbate oxidase; oxid 96.9 0.0018 6.3E-08 57.1 7.0 66 66-132 205-276 (552)
83 1kdj_A Plastocyanin; electron 96.9 0.0016 5.4E-08 44.4 5.1 62 65-136 17-87 (102)
84 3sqr_A Laccase; multicopper ox 96.8 0.002 6.7E-08 57.6 6.6 78 54-132 226-324 (580)
85 1id2_A Amicyanin; beta barrel, 96.7 0.0032 1.1E-07 43.6 5.9 60 65-136 34-93 (106)
86 3abg_A Bilirubin oxidase; clea 96.7 0.0011 3.9E-08 58.4 4.0 77 55-132 360-453 (534)
87 1iuz_A Plastocyanin; electron 96.5 0.0066 2.3E-07 41.1 6.2 62 65-136 18-83 (98)
88 1cuo_A Protein (azurin ISO-2); 96.5 0.013 4.5E-07 42.4 7.9 72 65-136 18-112 (129)
89 3erx_A Pseudoazurin; copper pr 96.3 0.0067 2.3E-07 43.6 5.3 63 65-141 21-83 (123)
90 3gyr_A PHS, phenoxazinone synt 96.3 0.0066 2.2E-07 53.5 6.2 44 53-96 458-503 (612)
91 3ef4_A Pseudoazurin, blue copp 96.1 0.0091 3.1E-07 43.1 5.3 63 65-141 22-84 (124)
92 3ay2_A Lipid modified azurin p 95.8 0.017 5.9E-07 43.7 6.0 72 65-136 58-150 (167)
93 3tu6_A Pseudoazurin (blue copp 95.8 0.0075 2.6E-07 43.6 3.7 63 65-141 23-85 (127)
94 2iaa_C Azurin; quinoprotein, t 95.7 0.044 1.5E-06 39.5 7.6 72 65-136 17-111 (128)
95 1nwp_A Azurin; electron transp 95.7 0.042 1.4E-06 39.6 7.3 72 65-136 18-112 (128)
96 2ccw_A Azurin II, AZN-2; elect 95.6 0.049 1.7E-06 39.3 7.3 72 65-136 18-112 (129)
97 3sbq_A Nitrous-oxide reductase 95.6 0.039 1.3E-06 49.6 8.1 64 55-132 548-614 (638)
98 3aw5_A Multicopper oxidase; be 95.4 0.023 7.7E-07 48.9 5.8 89 35-126 138-250 (448)
99 2ux6_A Pseudoazurin; type-1 co 95.2 0.031 1.1E-06 39.8 5.3 58 65-136 21-78 (122)
100 1paz_A Pseudoazurin precursor; 95.0 0.036 1.2E-06 39.6 5.1 62 65-140 21-82 (123)
101 1pmy_A Pseudoazurin; electron 94.7 0.032 1.1E-06 39.8 4.2 62 65-140 21-82 (123)
102 2cua_A Protein (CUA); CUA cent 93.2 0.15 5.1E-06 37.0 5.2 52 66-132 61-112 (135)
103 3fsa_A Azurin; copper, cupredo 92.9 0.41 1.4E-05 34.5 7.2 74 63-136 16-112 (125)
104 3s8f_B Cytochrome C oxidase su 91.6 0.3 1E-05 36.8 5.3 53 65-132 93-145 (168)
105 1xwv_A DER F II; beta sheets, 82.9 7.1 0.00024 27.5 7.9 63 63-126 23-93 (129)
106 1nep_A EPV20, BNPC2, epididyma 80.7 6.4 0.00022 27.8 7.0 63 64-126 25-95 (130)
107 2f1e_A Protein APAG; APAG prot 77.0 3.1 0.00011 29.8 4.3 46 76-122 34-85 (127)
108 2x3c_A Toxic extracellular end 77.0 6.3 0.00022 32.7 6.8 16 111-126 95-110 (343)
109 2xzz_A Protein-glutamine gamma 76.9 5.5 0.00019 27.3 5.4 54 73-132 22-79 (102)
110 1xvs_A Protein APAG; MCSG APC2 75.2 3.1 0.00011 29.8 3.9 46 76-122 33-84 (126)
111 2c34_A ICP, inhibitor of cyste 68.9 15 0.00053 25.4 6.3 68 64-132 14-89 (116)
112 1xq4_A Protein APAG; all beta 68.9 5.4 0.00019 29.0 4.0 46 76-122 38-89 (139)
113 3isy_A Bsupi, intracellular pr 66.9 30 0.001 24.3 10.0 69 53-132 22-95 (120)
114 1tza_A APAG protein, SOR45; st 66.8 4.9 0.00017 29.1 3.4 46 76-122 33-84 (134)
115 1cyx_A CYOA; electron transpor 62.4 9.8 0.00034 29.4 4.5 53 65-132 41-93 (205)
116 2gsm_B Cytochrome C oxidase su 61.3 13 0.00043 29.7 5.1 53 65-132 171-223 (262)
117 1lm8_V VHL, VON hippel-lindau 60.5 18 0.0006 27.0 5.5 42 71-121 15-56 (160)
118 1yew_A Particulate methane mon 57.7 23 0.00078 29.9 6.2 53 74-129 267-337 (382)
119 3hb3_B Cytochrome C oxidase su 56.2 18 0.00061 29.5 5.3 53 65-132 189-241 (298)
120 2h7w_A Chagasin; beta-strands, 55.8 52 0.0018 23.3 9.4 66 64-132 32-104 (131)
121 4ajy_V VON hippel-lindau disea 55.6 21 0.00071 26.7 5.1 51 62-121 8-59 (163)
122 1v54_B Cytochrome C oxidase po 51.5 17 0.00058 28.3 4.3 53 65-132 140-192 (227)
123 3rfr_A PMOB; membrane, oxidore 50.4 36 0.0012 29.0 6.3 53 74-129 301-369 (419)
124 2cio_B Inhibitor of cysteine p 44.9 75 0.0026 22.0 9.1 66 64-132 12-93 (121)
125 3sob_L Antibody light chain; b 44.2 31 0.001 24.8 4.6 25 67-91 34-58 (237)
126 2wnv_C C1Q chain C, complement 40.1 21 0.00071 25.0 2.9 17 65-81 93-109 (131)
127 2wnv_A C1Q chain A, complement 39.9 23 0.00077 24.8 3.1 17 65-81 94-110 (134)
128 2ys4_A Hydrocephalus-inducing 39.8 53 0.0018 22.2 5.0 60 66-132 36-96 (122)
129 2kut_A Uncharacterized protein 39.0 95 0.0033 21.7 6.3 61 70-132 13-86 (122)
130 2wnv_B C1Q chain B, complement 38.2 23 0.00078 25.0 2.9 17 65-81 95-111 (136)
131 3es6_B Prolactin-inducible pro 37.8 80 0.0027 21.9 5.7 61 68-132 17-80 (118)
132 2wtp_A ORF131 protein, CZCE; m 36.7 14 0.00049 26.6 1.6 17 66-82 72-88 (131)
133 3rpf_C Molybdopterin convertin 35.2 14 0.00049 23.1 1.3 24 54-77 43-67 (74)
134 1vjj_A Protein-glutamine gluta 33.9 93 0.0032 28.3 6.7 54 74-132 611-668 (692)
135 2kyw_A Adhesion exoprotein; st 33.7 30 0.001 22.7 2.6 29 68-96 53-82 (87)
136 2hj1_A Hypothetical protein; s 33.6 14 0.00047 25.1 1.0 24 54-77 59-82 (97)
137 2q3z_A Transglutaminase 2; tra 32.8 1.1E+02 0.0036 27.9 6.9 54 74-132 604-662 (687)
138 4ubp_B Protein (urease (chain 32.0 48 0.0017 23.6 3.7 27 66-92 18-47 (126)
139 4ac7_B Urease subunit beta; hy 32.0 48 0.0017 23.6 3.7 27 66-92 18-47 (126)
140 2wgn_B Inhibitor of cysteine p 29.1 1.5E+02 0.0051 20.8 9.4 72 58-132 28-105 (132)
141 3kmh_A D-lyxose isomerase; cup 28.0 71 0.0024 25.3 4.4 49 65-120 129-183 (246)
142 1fft_B Ubiquinol oxidase; elec 27.8 39 0.0013 27.6 3.0 53 65-132 151-203 (315)
143 1z65_A PRPLP, prion-like prote 27.3 14 0.00046 19.8 0.1 21 12-32 4-24 (30)
144 3bj9_1 Immunoglobulin IOTA cha 26.3 71 0.0024 20.5 3.7 27 65-91 6-35 (116)
145 1gr3_A Collagen X; extracellul 25.9 34 0.0012 24.9 2.1 18 64-81 119-136 (160)
146 2vpv_A Protein MIF2, MIF2P; nu 25.3 1.1E+02 0.0038 22.4 4.9 30 63-92 126-161 (166)
147 2icn_B Prolactin-inducible pro 24.3 1.7E+02 0.0058 20.3 5.4 56 68-126 17-75 (118)
148 1o91_A Collagen alpha 1(VIII) 23.5 40 0.0014 25.0 2.1 17 65-81 138-154 (178)
149 3idu_A Uncharacterized protein 23.0 1.5E+02 0.0053 20.6 5.1 56 68-132 28-90 (127)
150 3m86_A Amoebiasin-2; cysteine 22.7 70 0.0024 21.7 3.1 62 63-132 14-84 (111)
151 1pew_A JTO2, A lambda-6 type i 22.1 73 0.0025 20.3 3.0 29 63-92 7-37 (109)
152 1p4b_L Antibody variable light 21.9 95 0.0032 21.2 3.8 28 65-92 13-43 (135)
153 1oaq_L Light chain; antibody, 21.9 93 0.0032 20.2 3.6 27 65-91 8-37 (120)
154 2q5w_D Molybdopterin convertin 21.1 37 0.0013 21.0 1.3 23 55-77 48-70 (77)
155 4ffy_L DENV1-E111 single chain 21.0 1.1E+02 0.0037 20.2 3.8 28 65-92 9-40 (126)
156 2qcp_X Cation efflux system pr 21.0 1.5E+02 0.0053 18.8 4.4 21 66-86 51-71 (80)
157 4esk_A LAIR-1, mlair1, leukocy 20.6 1.2E+02 0.0042 19.7 3.9 20 60-79 5-30 (102)
158 3ugn_A Tumor necrosis factor l 20.6 33 0.0011 25.4 1.0 23 61-83 128-150 (167)
159 4ety_A LAIR-1, mlair1, leukocy 20.3 1.3E+02 0.0045 20.3 4.2 20 60-79 5-30 (118)
160 1tnr_A Tumor necrosis factor b 20.2 35 0.0012 24.2 1.1 21 62-82 107-127 (144)
No 1
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=99.98 E-value=2.3e-32 Score=241.58 Aligned_cols=104 Identities=31% Similarity=0.516 Sum_probs=96.5
Q ss_pred ccccceEEEEEEEEEEEEecCCe-eeEEEEECCCCCCceEEEecCCEEEEEEEecCC-----CCeeEEeeccccCCCCCC
Q 043378 29 PAFGITRHCKFDIKLQNATRLCH-TKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQ-----NNISIHWHGIGQLRSGWA 102 (162)
Q Consensus 29 ~a~~~~~~~~l~i~~~~~~~~g~-~~~~~~~Ng~~PGP~I~v~~Gd~v~v~v~N~l~-----~~~siH~HGl~~~~~~~~ 102 (162)
.+++..++|+|++++.++.+||. ++++|+|||++|||+|++++||+|+|+|+|+++ ++++|||||+++.+.+|+
T Consensus 18 ~~~~~~~~~~l~i~~~~~~~dg~~~~~~~~~NG~~PGP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~ 97 (521)
T 1v10_A 18 LSLAATVALDLHILNANLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEM 97 (521)
T ss_dssp ----CCSEEEEEEEEEEECTTSSCCEEEEEESSSSSCCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGG
T ss_pred hhcccCceEEEEEEEEEEcCCCcceEEEEEECCccCCCcEEEeCCCEEEEEEEECCCCccCCCCceEecCCeeccCCCcc
Confidence 34567789999999999999999 999999999999999999999999999999999 999999999999888899
Q ss_pred CCCccccCCccCCCCeEEEEEEeCCCcccC
Q 043378 103 DGPAYITQCPIQTGQGCVYNFTIVGQRGKL 132 (162)
Q Consensus 103 DG~~~vtq~~I~PG~~~tY~f~~~~~~Gt~ 132 (162)
||+|+++||+|+||++|+|+|++.+++|||
T Consensus 98 DGv~~vtq~~I~PG~s~~Y~f~~~~~~GT~ 127 (521)
T 1v10_A 98 DGPAFVNQCPIIPNESFVYDFVVPGQAGTY 127 (521)
T ss_dssp SCCBTTTBCCBCTTEEEEEEEECTTCCEEE
T ss_pred CCCcceeeCCcCCCCeEEEEEecCCCCccE
Confidence 999999999999999999999976789999
No 2
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=99.97 E-value=1.8e-31 Score=238.98 Aligned_cols=101 Identities=41% Similarity=0.646 Sum_probs=97.5
Q ss_pred ccceEEEEEEEEEEEEecCCeeeEEEEECCCCCCceEEEecCCEEEEEEEecCC-CCeeEEeeccccCCCCCCCCCcccc
Q 043378 31 FGITRHCKFDIKLQNATRLCHTKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQ-NNISIHWHGIGQLRSGWADGPAYIT 109 (162)
Q Consensus 31 ~~~~~~~~l~i~~~~~~~~g~~~~~~~~Ng~~PGP~I~v~~Gd~v~v~v~N~l~-~~~siH~HGl~~~~~~~~DG~~~vt 109 (162)
.+++++|+|+|++.++.+||.++++|+|||++|||+|++++||+|+|+|+|+++ ++++|||||+++++++|+||+|++|
T Consensus 64 ~~~~~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~vT 143 (580)
T 3sqr_A 64 TGVTREYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVT 143 (580)
T ss_dssp CCCEEEEEEEEEEEEECSSSBCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCBTTT
T ss_pred CceEEEEEEEEEEEEecCCCeEEEEEEECCccCCceEEEeCCCEEEEEEEECCCCCcceEEecccccCCCccccCCCccc
Confidence 467899999999999999999999999999999999999999999999999998 8999999999999888999999999
Q ss_pred CCccCCCCeEEEEEEeCCCcccC
Q 043378 110 QCPIQTGQGCVYNFTIVGQRGKL 132 (162)
Q Consensus 110 q~~I~PG~~~tY~f~~~~~~Gt~ 132 (162)
||+|+||++|+|+|++ .|+|||
T Consensus 144 q~pI~PG~sftY~f~~-~q~GT~ 165 (580)
T 3sqr_A 144 QCPIAPGDTLTYKFQV-TQYGTT 165 (580)
T ss_dssp BCCBCTTCEEEEEEEC-CCCEEE
T ss_pred cCCCCCCCeEEEEEEC-CCCcce
Confidence 9999999999999999 589998
No 3
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=99.97 E-value=1.4e-31 Score=237.77 Aligned_cols=100 Identities=36% Similarity=0.778 Sum_probs=97.1
Q ss_pred cceEEEEEEEEEEEEecCCeeeEEEEECCCCCCceEEEecCCEEEEEEEecCC-CCeeEEeeccccCCCCCCCCCccccC
Q 043378 32 GITRHCKFDIKLQNATRLCHTKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQ-NNISIHWHGIGQLRSGWADGPAYITQ 110 (162)
Q Consensus 32 ~~~~~~~l~i~~~~~~~~g~~~~~~~~Ng~~PGP~I~v~~Gd~v~v~v~N~l~-~~~siH~HGl~~~~~~~~DG~~~vtq 110 (162)
+++|+|+|+|++..+.+||.++++|+|||++|||+|++++||+|+|+|+|+++ ++++|||||+++++++|+||+|+++|
T Consensus 1 ~~~~~y~~~v~~~~~~~dg~~~~~~~~Ng~~PGP~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq 80 (552)
T 1aoz_A 1 SQIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQ 80 (552)
T ss_dssp CCEEEEEEEEEEEEECTTSSCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred CeEEEEEEEEEEEEEcCCCceEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCccccc
Confidence 36899999999999999999999999999999999999999999999999998 99999999999999999999999999
Q ss_pred CccCCCCeEEEEEEeCCCcccC
Q 043378 111 CPIQTGQGCVYNFTIVGQRGKL 132 (162)
Q Consensus 111 ~~I~PG~~~tY~f~~~~~~Gt~ 132 (162)
|+|+||++|+|+|++ +++|||
T Consensus 81 ~~I~PG~s~tY~f~~-~~~GT~ 101 (552)
T 1aoz_A 81 CAINPGETFFYNFTV-DNPGTF 101 (552)
T ss_dssp CCBCTTCEEEEEEEC-CSCEEE
T ss_pred CCcCCCCeEEEEEEC-CCCEEE
Confidence 999999999999999 799999
No 4
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.4e-31 Score=237.45 Aligned_cols=115 Identities=28% Similarity=0.517 Sum_probs=107.0
Q ss_pred ceEEEEEEEEEEEEecCC-eeeEEEEECCCCCCceEEEecCCEEEEEEEecCC-CCeeEEeeccccCCCCCCCCCccccC
Q 043378 33 ITRHCKFDIKLQNATRLC-HTKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQ-NNISIHWHGIGQLRSGWADGPAYITQ 110 (162)
Q Consensus 33 ~~~~~~l~i~~~~~~~~g-~~~~~~~~Ng~~PGP~I~v~~Gd~v~v~v~N~l~-~~~siH~HGl~~~~~~~~DG~~~vtq 110 (162)
++++|+|+|++.++.+|| .++++|+|||++|||+|++++||+|+|+|+|+++ ++++|||||++++..+|+||+|++||
T Consensus 1 ~~~~~~~~v~~~~~~pdG~~~~~~~~~Ng~~PGP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq 80 (534)
T 1zpu_A 1 ETHTFNWTTGWDYRNVDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQ 80 (534)
T ss_dssp CEEEEEEEEEEEEECSSSSCCEEEEEETTBSSCCCEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTB
T ss_pred CEEEEEEEEEEEEecCCCCceEEEEEECCccCCccEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCcccc
Confidence 478999999999999999 8999999999999999999999999999999998 99999999999998889999999999
Q ss_pred CccCCCCeEEEEEEeCCCcccC----------------------CCCCCCCCCceEEEEh
Q 043378 111 CPIQTGQGCVYNFTIVGQRGKL----------------------SPNPFAEPYKEVPLIF 148 (162)
Q Consensus 111 ~~I~PG~~~tY~f~~~~~~Gt~----------------------~~~p~p~~dre~~l~l 148 (162)
|+|+||++|+|+|++++++||| ...|+ .+|+|++|+|
T Consensus 81 ~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~p~-~~d~e~~l~l 139 (534)
T 1zpu_A 81 CPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDDSFPY-DYDEELSLSL 139 (534)
T ss_dssp CCBCTTCEEEEEEECSSCCEEEEEECCSSSGGGGTCEEEEEEECTTCCS-CCSEEEEEEE
T ss_pred CCcCCCCeEEEEEEeCccceeEEEEEcCcccccCcceeeEEeCCCCCCC-CCcceEEEEe
Confidence 9999999999999996699998 22344 6799999999
No 5
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=99.97 E-value=1.2e-30 Score=229.72 Aligned_cols=98 Identities=37% Similarity=0.680 Sum_probs=94.6
Q ss_pred EEEEEEEEEEEEecCCeeeEEEEECCCCCCceEEEecCCEEEEEEEecCCC-----CeeEEeeccccCCCCCCCCCcccc
Q 043378 35 RHCKFDIKLQNATRLCHTKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQN-----NISIHWHGIGQLRSGWADGPAYIT 109 (162)
Q Consensus 35 ~~~~l~i~~~~~~~~g~~~~~~~~Ng~~PGP~I~v~~Gd~v~v~v~N~l~~-----~~siH~HGl~~~~~~~~DG~~~vt 109 (162)
.+|+|+|++.++.+||.++.+|+|||++|||+|++++||+|+|+|+|++++ +++|||||++++.++|+||+|++|
T Consensus 5 ~~~~l~i~~~~~~pdg~~~~~~~~NG~~PGP~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vt 84 (495)
T 3t6v_A 5 PVTDLHIVNADIVPDGFVRPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFIT 84 (495)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTSSSCCEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTT
T ss_pred CeEEEEEEEEEEcCCCceEEEEEECCcccCCeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccc
Confidence 689999999999999999999999999999999999999999999999985 799999999999888999999999
Q ss_pred CCccCCCCeEEEEEEeCCCcccC
Q 043378 110 QCPIQTGQGCVYNFTIVGQRGKL 132 (162)
Q Consensus 110 q~~I~PG~~~tY~f~~~~~~Gt~ 132 (162)
||+|+||++|+|+|++++++|||
T Consensus 85 q~pI~PG~sftY~f~~~~~~GT~ 107 (495)
T 3t6v_A 85 QCPIIVGNSFSYNFNVPGMAGTY 107 (495)
T ss_dssp BCCBCTTCEEEEEEECTTCCEEE
T ss_pred cCCCCCCCeEEEEEEeCCCCcee
Confidence 99999999999999997789998
No 6
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=99.97 E-value=1.7e-30 Score=229.13 Aligned_cols=99 Identities=35% Similarity=0.705 Sum_probs=94.8
Q ss_pred eEEEEEEEEEEEEecCCeeeEEEEECCCCCCceEEEecCCEEEEEEEecCCC-----CeeEEeeccccCCCCCCCCCccc
Q 043378 34 TRHCKFDIKLQNATRLCHTKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQN-----NISIHWHGIGQLRSGWADGPAYI 108 (162)
Q Consensus 34 ~~~~~l~i~~~~~~~~g~~~~~~~~Ng~~PGP~I~v~~Gd~v~v~v~N~l~~-----~~siH~HGl~~~~~~~~DG~~~v 108 (162)
..+|+|+|++.++.+||.++.+|+|||++|||+|++++||+|+|+|+|++++ ++||||||++++.++|+||++++
T Consensus 3 ~~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~v 82 (499)
T 3pxl_A 3 GPVADLTITDAAVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFI 82 (499)
T ss_dssp CSEEEEEEEEEEECTTSCCEEEEEETTBSSCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTT
T ss_pred cceEEEEEEEEEEcCCCcEEEEEEECCcccCCeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCcc
Confidence 3589999999999999999999999999999999999999999999999985 79999999999988899999999
Q ss_pred cCCccCCCCeEEEEEEeCCCcccC
Q 043378 109 TQCPIQTGQGCVYNFTIVGQRGKL 132 (162)
Q Consensus 109 tq~~I~PG~~~tY~f~~~~~~Gt~ 132 (162)
|||+|+||++|+|+|++++++|||
T Consensus 83 tq~pI~PG~s~tY~f~~~~~~GT~ 106 (499)
T 3pxl_A 83 NQCPISPGHSFLYDFQVPDQAGTF 106 (499)
T ss_dssp TBCCBCTTCEEEEEEECSSCCEEE
T ss_pred ccCCCCCCCeEEEEEEcCCCCcee
Confidence 999999999999999997789998
No 7
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=99.96 E-value=2.3e-29 Score=224.11 Aligned_cols=101 Identities=32% Similarity=0.565 Sum_probs=96.2
Q ss_pred ccceEEEEEEEEEEE--EecCCee-eEEEEECCCCCCceEEEecCCEEEEEEEecC-CCCeeEEeeccccCCCCCCCCCc
Q 043378 31 FGITRHCKFDIKLQN--ATRLCHT-KSIVSVNGKFPGPRIVAREGDQLLIKVVKHV-QNNISIHWHGIGQLRSGWADGPA 106 (162)
Q Consensus 31 ~~~~~~~~l~i~~~~--~~~~g~~-~~~~~~Ng~~PGP~I~v~~Gd~v~v~v~N~l-~~~~siH~HGl~~~~~~~~DG~~ 106 (162)
.+++++|+|++++.+ +.++|.+ +.+|+|||++|||+|++++||+|+|+|+|++ +++++|||||+++++.+|+||+|
T Consensus 30 ~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~Ng~~PGP~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~ 109 (559)
T 2q9o_A 30 TGVTQSYVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGAN 109 (559)
T ss_dssp CCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTBSSCCCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCCB
T ss_pred CCeEEEEEEEEEEeEeeECCCCccceEEEEECCcccCCcEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCCC
Confidence 567899999999999 7789999 9999999999999999999999999999999 68999999999998888999999
Q ss_pred cccCCccCC-CCeEEEEEEeCCCcccC
Q 043378 107 YITQCPIQT-GQGCVYNFTIVGQRGKL 132 (162)
Q Consensus 107 ~vtq~~I~P-G~~~tY~f~~~~~~Gt~ 132 (162)
+++||+|+| |++|+|+|++ .++|||
T Consensus 110 ~~tq~~I~P~G~~~~Y~f~~-~q~GT~ 135 (559)
T 2q9o_A 110 GVTECPIPPKGGQRTYRWRA-RQYGTS 135 (559)
T ss_dssp TTTBCCBCTTTEEEEEEEEC-CSCEEE
T ss_pred ccccCccCCCCCeEEEEEEC-CCCEEE
Confidence 999999999 9999999999 589999
No 8
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=99.96 E-value=7.1e-29 Score=207.48 Aligned_cols=99 Identities=26% Similarity=0.384 Sum_probs=94.5
Q ss_pred ceEEEEEEEEEEEEec-CCeeeEEEEECCCCCCceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCccccCC
Q 043378 33 ITRHCKFDIKLQNATR-LCHTKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPAYITQC 111 (162)
Q Consensus 33 ~~~~~~l~i~~~~~~~-~g~~~~~~~~Ng~~PGP~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~~vtq~ 111 (162)
.+|+|+|++++.++++ +|..+.+|+|||++|||+|++++||+|+|+|+|.++++++|||||+++++..++||+|+++||
T Consensus 1 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~p~~t~~ 80 (318)
T 3g5w_A 1 EKREFDLSIEDTRIVLVGKRDFHTFAFNGQVPAPLIHVMEGDDVTVNVTNMTTLPHTIHWHGMLQRGTWQSDGVPHATQH 80 (318)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred CeEEEEEEEEEEEEEcCCCcEEEEEEECCccCCceEEEeCCCEEEEEEEeCCCCceeEEecCcCCCCCcccCCCcccccc
Confidence 4799999999999998 588999999999999999999999999999999999999999999999887789999999999
Q ss_pred ccCCCCeEEEEEEeCCCcccC
Q 043378 112 PIQTGQGCVYNFTIVGQRGKL 132 (162)
Q Consensus 112 ~I~PG~~~tY~f~~~~~~Gt~ 132 (162)
+|+||++++|+|++ +++|||
T Consensus 81 ~i~PG~~~~y~f~~-~~~Gt~ 100 (318)
T 3g5w_A 81 AIEPGDTFTYKFKA-EPAGTM 100 (318)
T ss_dssp CBCTTCEEEEEEEC-CSCEEE
T ss_pred cCCCCCEEEEEEEc-CCCEEE
Confidence 99999999999999 689998
No 9
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=99.96 E-value=3.6e-29 Score=220.26 Aligned_cols=97 Identities=33% Similarity=0.600 Sum_probs=93.2
Q ss_pred EEEEEEEEEEEEecCCeeeEEEEECCCCCCceEEEecCCEEEEEEEecCC-----CCeeEEeeccccCCCCCCCCCcccc
Q 043378 35 RHCKFDIKLQNATRLCHTKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQ-----NNISIHWHGIGQLRSGWADGPAYIT 109 (162)
Q Consensus 35 ~~~~l~i~~~~~~~~g~~~~~~~~Ng~~PGP~I~v~~Gd~v~v~v~N~l~-----~~~siH~HGl~~~~~~~~DG~~~vt 109 (162)
..|+|++++.++.+||.++++|+|||++ ||+|++++||+|+|+|+|+++ ++++|||||+++.+.+|+||+|+++
T Consensus 5 ~~~~l~i~~~~~~~~g~~~~~~~~NG~~-GP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~vt 83 (503)
T 1hfu_A 5 SVDTMTLTNANVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVN 83 (503)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTBS-SCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTT
T ss_pred CeEEEEEEEEEECCCCeEEEEEEECCcc-CCcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCcccc
Confidence 4799999999999999999999999999 999999999999999999999 9999999999998888999999999
Q ss_pred CCccCCCCeEEEEEEeCCCcccC
Q 043378 110 QCPIQTGQGCVYNFTIVGQRGKL 132 (162)
Q Consensus 110 q~~I~PG~~~tY~f~~~~~~Gt~ 132 (162)
||+|+||++|+|+|++.+++|||
T Consensus 84 q~~I~PG~~~~Y~f~~~~~~GT~ 106 (503)
T 1hfu_A 84 QCPISPGHAFLYKFTPAGHAGTF 106 (503)
T ss_dssp BCCBCTTCEEEEEECCTTCCEEE
T ss_pred cCCcCCCCeEEEEEEeCCCCccE
Confidence 99999999999999976789999
No 10
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=99.95 E-value=5.3e-28 Score=203.39 Aligned_cols=99 Identities=29% Similarity=0.516 Sum_probs=95.1
Q ss_pred ceEEEEEEEEEEEEec-CCeeeEEEEECCCCCCceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCccccCC
Q 043378 33 ITRHCKFDIKLQNATR-LCHTKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPAYITQC 111 (162)
Q Consensus 33 ~~~~~~l~i~~~~~~~-~g~~~~~~~~Ng~~PGP~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~~vtq~ 111 (162)
.+++|+|++++.++++ +|.++.+|+|||++|||+|++++||+|+|+|+|.++++++|||||++++..+|+||+|+++||
T Consensus 2 ~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pGP~I~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGvp~vtq~ 81 (339)
T 2zwn_A 2 AEREFDMTIEEVTIKVAPGLDYKVFGFNGQVPGPLIHVQEGDDVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGVPGVTQQ 81 (339)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEESSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred ceEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCeEEEECCCEEEEEEEECCCCCccEEeCCCCcCCCcccCCCCccccC
Confidence 4789999999999998 599999999999999999999999999999999999999999999999998899999999999
Q ss_pred ccCCCCeEEEEEEeCCCcccC
Q 043378 112 PIQTGQGCVYNFTIVGQRGKL 132 (162)
Q Consensus 112 ~I~PG~~~tY~f~~~~~~Gt~ 132 (162)
+|+||++++|+|++ +++|||
T Consensus 82 ~I~PG~~~~y~f~~-~~~Gt~ 101 (339)
T 2zwn_A 82 PIEAGDSYTYKFKA-DRIGTL 101 (339)
T ss_dssp CBCTTCEEEEEEEC-CSCEEE
T ss_pred ccCCCCeEEEEEEC-CCCEEE
Confidence 99999999999999 589998
No 11
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=99.95 E-value=3.2e-27 Score=194.66 Aligned_cols=114 Identities=25% Similarity=0.288 Sum_probs=102.3
Q ss_pred ccceEEEEEEEEEEEEec-CCeeeEEEEECCCCCCceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCcccc
Q 043378 31 FGITRHCKFDIKLQNATR-LCHTKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPAYIT 109 (162)
Q Consensus 31 ~~~~~~~~l~i~~~~~~~-~g~~~~~~~~Ng~~PGP~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~~vt 109 (162)
...+++|+|++++.++++ +|..+.+|+|||++|||+|++++||+|+|+|+|+++++++|||||++. .++||+|+++
T Consensus 31 ~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~~~~~~~iH~HG~~~---~~~DG~p~~~ 107 (288)
T 3gdc_A 31 GRTLREWDIVAVDKDFEIAPGIIFKGWSYNGRIPGPTLWAREGDALRIHFTNAGAHPHTIHFHGVHR---ATMDGTPGIG 107 (288)
T ss_dssp SCEEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEESSCCC---GGGSCCTTST
T ss_pred CCcEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCcccEEeccccc---cccCCCCCcc
Confidence 445789999999999988 499999999999999999999999999999999999999999999973 3599999999
Q ss_pred CCccCCCCeEEEEEEeCCCcccC------------------------CCCCCCCCCceEEEEh
Q 043378 110 QCPIQTGQGCVYNFTIVGQRGKL------------------------SPNPFAEPYKEVPLIF 148 (162)
Q Consensus 110 q~~I~PG~~~tY~f~~~~~~Gt~------------------------~~~p~p~~dre~~l~l 148 (162)
|++|+||++++|+|++ +++||| .+.+.+.+|||++|++
T Consensus 108 ~~~i~PG~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~~~~~d~e~~l~~ 169 (288)
T 3gdc_A 108 AGSIAPGQSFTYEFDA-TPFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEGRPPADDEMVMVM 169 (288)
T ss_dssp TCSBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECSSCCCCCSEEEEEEE
T ss_pred ceeECCCCEEEEEEEc-CCCccEEEEecCcchHHHHhCcCeEEEEEeCCccCCCCcceEEEEE
Confidence 9999999999999999 789998 2223456789998888
No 12
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=99.95 E-value=2.1e-28 Score=213.03 Aligned_cols=95 Identities=15% Similarity=0.184 Sum_probs=90.0
Q ss_pred ceEEEEEEEEEEEEec-CCeeeEEEEECCCCCCceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCccccCC
Q 043378 33 ITRHCKFDIKLQNATR-LCHTKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPAYITQC 111 (162)
Q Consensus 33 ~~~~~~l~i~~~~~~~-~g~~~~~~~~Ng~~PGP~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~~vtq~ 111 (162)
..++|+|++++.+.++ +|.++++|+|||++|||+|++++||+|+|+|+|+++++++|||||+++++. +||+| ||
T Consensus 17 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~--~DG~~---~~ 91 (451)
T 2uxt_A 17 RGQPLFMTVQRAHWSFTPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMTVAGLQVPGP--LMGGP---AR 91 (451)
T ss_dssp SSCCEEEEEEECCGGGCSSSSSCCEEETTSSBCCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCGG--GSCSG---GG
T ss_pred CceEEEEEEEEEEEEcCCCceeEEEEECCcccCceEEEeCCCEEEEEEEECCCCCccEEECCccCCCC--CCCCC---cC
Confidence 3578999999999998 799999999999999999999999999999999999999999999999987 99998 89
Q ss_pred ccCCCCeEEEEEEeCCCcccC
Q 043378 112 PIQTGQGCVYNFTIVGQRGKL 132 (162)
Q Consensus 112 ~I~PG~~~tY~f~~~~~~Gt~ 132 (162)
+|+||++|+|+|++++++|||
T Consensus 92 ~i~PG~~~~Y~f~~~~~~GT~ 112 (451)
T 2uxt_A 92 MMSPNADWAPVLPIRQNAATL 112 (451)
T ss_dssp CBCTTCEECCEEECCSCSEEE
T ss_pred cCCCCCeEEEEEEcCCCCcce
Confidence 999999999999996569999
No 13
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=99.94 E-value=4.4e-27 Score=206.62 Aligned_cols=98 Identities=29% Similarity=0.447 Sum_probs=91.2
Q ss_pred cccceEEEEEEEEEEEEec-CCeeeEEEEECCCCCCceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCccc
Q 043378 30 AFGITRHCKFDIKLQNATR-LCHTKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPAYI 108 (162)
Q Consensus 30 a~~~~~~~~l~i~~~~~~~-~g~~~~~~~~Ng~~PGP~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~~v 108 (162)
+.+.+++|+|++++.++++ +|.++++|+|||++|||+||+++||+|+|+|+|+++++|||||||+++++ ++||+|
T Consensus 46 ~~~~~~~~~L~~~~~~~~~~~G~~~~~~~~NG~~PGPtIr~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~--~~DG~p-- 121 (481)
T 3zx1_A 46 KEKNIFHATLEIKENHIELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPVPP--DQDGSP-- 121 (481)
T ss_dssp CSTTEEEEEEEEEEEEECCSTTCCEEEEEETTBSSCCBEEEETTCEEEEEEEECSSSCBCCEEETCCCCG--GGSCCT--
T ss_pred cCCCeEEEEEEEEEEEEEccCCcEEEEEEECCCCCCceEEEECCcEEEEEEEeCCCCCeeEEecCcccCC--ccCCCc--
Confidence 4678899999999999997 69999999999999999999999999999999999999999999999975 499986
Q ss_pred cCCccCCCCeEEEEEEeCCC-cccC
Q 043378 109 TQCPIQTGQGCVYNFTIVGQ-RGKL 132 (162)
Q Consensus 109 tq~~I~PG~~~tY~f~~~~~-~Gt~ 132 (162)
||+|+||++|+|+|+++++ +|||
T Consensus 122 -q~~I~PG~s~~Y~f~~~~~~~GT~ 145 (481)
T 3zx1_A 122 -HDPILAGEERIYRFEIPQDSAGTY 145 (481)
T ss_dssp -TSCBCTTCEEEEEEECCTTCCEEE
T ss_pred -cCcCCCCCeEEEEEeCCCCCCceE
Confidence 8999999999999999643 7998
No 14
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=99.94 E-value=5.5e-27 Score=208.56 Aligned_cols=113 Identities=19% Similarity=0.261 Sum_probs=96.9
Q ss_pred ccceEEEEEEEEEEEEec--CCeeeEEEEECCCCCCceEEEecCCEEEEEEEecCCCC----------------------
Q 043378 31 FGITRHCKFDIKLQNATR--LCHTKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNN---------------------- 86 (162)
Q Consensus 31 ~~~~~~~~l~i~~~~~~~--~g~~~~~~~~Ng~~PGP~I~v~~Gd~v~v~v~N~l~~~---------------------- 86 (162)
....+.|+|++++.+.++ ++..+++|+|||++|||+|++++||+|+|+|+|+|+++
T Consensus 29 ~~~~~~~~i~~~~~~~~~~~~~~~t~~~gyNg~~PGPti~~~~Gd~v~v~~~N~L~~~~~~h~hg~~~~~~~~~~~~~~~ 108 (612)
T 3gyr_A 29 DEVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNT 108 (612)
T ss_dssp SCTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGG
T ss_pred CCCcceEEEEEEEEEEeecCCCCcceEEEECCcccCcEEEEeCCcEEEEEEEECCCCCcccccccccccCCCCCCccccc
Confidence 345678999999988776 45788999999999999999999999999999999765
Q ss_pred -------------------eeEEeeccccCCCCCCCCCccccCCccCCCCeEEEEEEeCCCcccC---------------
Q 043378 87 -------------------ISIHWHGIGQLRSGWADGPAYITQCPIQTGQGCVYNFTIVGQRGKL--------------- 132 (162)
Q Consensus 87 -------------------~siH~HGl~~~~~~~~DG~~~vtq~~I~PG~~~tY~f~~~~~~Gt~--------------- 132 (162)
++|||||+++++ ++||++ ||+|+||++|+|+|++.+++|||
T Consensus 109 ~~~~~~~~~~~~~~~~~~~ttiHwHGl~~~~--~~DGv~---q~~I~PG~~~~Y~f~~~q~~GT~WYHsH~~g~t~~q~~ 183 (612)
T 3gyr_A 109 EPGRGGVEPNKDVAALPAWSVTHLHGAQTGG--GNDGWA---DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVM 183 (612)
T ss_dssp SCSCTTCCCCHHHHTCCCCBCEEEETCCCCT--TTSCCG---GGCBCTTCEEEEEECCCSCSEEEEEEECCTTTHHHHTT
T ss_pred cccccccccccccccCCCCceEEcCCCccCC--cccCcc---cCccCCCCCEEEEEEcCCCCceEEEeeCCCCcchhhhh
Confidence 678888888864 488875 89999999999999997678997
Q ss_pred --------------CCCCCCCCCceEEEEh
Q 043378 133 --------------SPNPFAEPYKEVPLIF 148 (162)
Q Consensus 133 --------------~~~p~p~~dre~~l~l 148 (162)
...++|.+|+|++|+|
T Consensus 184 ~Gl~G~liI~d~~~~~~~~p~~d~e~~lvl 213 (612)
T 3gyr_A 184 AGLYGTYLVRDDEEDALGLPSGDREIPLLI 213 (612)
T ss_dssp TTCEEEEEEECHHHHTTTCCCGGGEEEEEE
T ss_pred ccceeEEEEcCccccccCCCCCCccEEEEE
Confidence 3345678899999998
No 15
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=99.94 E-value=1.2e-26 Score=204.28 Aligned_cols=95 Identities=18% Similarity=0.317 Sum_probs=89.5
Q ss_pred ceEEEEEEEEEEEEecCCeeeEEEEECCCCCCceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCccccCCc
Q 043378 33 ITRHCKFDIKLQNATRLCHTKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPAYITQCP 112 (162)
Q Consensus 33 ~~~~~~l~i~~~~~~~~g~~~~~~~~Ng~~PGP~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~~vtq~~ 112 (162)
..++|+|++++.+++++|+++++|+|||++|||+|++++||+|+|+|+|+++++++|||||+++++. +||+| ||+
T Consensus 16 ~~~~~~l~~~~~~~~~~G~~~~~~~~NG~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~--~DG~p---~~~ 90 (488)
T 3od3_A 16 ARNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVPGE--VDGGP---QGI 90 (488)
T ss_dssp TTSEEEEEEEEEEEEETTEEEEEEEESSSSBCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCCHH--HHCCT---TCC
T ss_pred CCeeEEEEEEEEEEccCCeEEEEEEECCcCCCCeEEEeCCeEEEEEEEeCCcCceeEeecccccCcc--cCCCC---cCc
Confidence 4578999999999999999999999999999999999999999999999999999999999999864 99987 899
Q ss_pred cCCCCeEEEEEEeCCCcccC
Q 043378 113 IQTGQGCVYNFTIVGQRGKL 132 (162)
Q Consensus 113 I~PG~~~tY~f~~~~~~Gt~ 132 (162)
|+||++++|+|++.+++|||
T Consensus 91 i~PG~~~~Y~f~~~~~aGT~ 110 (488)
T 3od3_A 91 IPPGGKRSVTLNVDQPAATC 110 (488)
T ss_dssp BCTTCEEEEEEECCSCSEEE
T ss_pred CcCCCeEEEEEecCCCceeE
Confidence 99999999999996568998
No 16
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=99.94 E-value=2.3e-26 Score=199.13 Aligned_cols=96 Identities=22% Similarity=0.420 Sum_probs=89.3
Q ss_pred ccceEEEEEEEEEEEEecCCeeeEEEEECCCCCCceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCccccC
Q 043378 31 FGITRHCKFDIKLQNATRLCHTKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPAYITQ 110 (162)
Q Consensus 31 ~~~~~~~~l~i~~~~~~~~g~~~~~~~~Ng~~PGP~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~~vtq 110 (162)
.+.+++|+|++++.+++++|+++++|+|||++|||+|++++||+|+|+|+|+++++++|||||+++++ |+||++
T Consensus 13 ~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~--~~DG~~---- 86 (439)
T 2xu9_A 13 QGGLLSLKLSATPTPLAIAGQRATLLTYGGSFPGPTLRVRPRDTVRLTLENRLPEPTNLHWHGLPISP--KVDDPF---- 86 (439)
T ss_dssp BTTEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEECTTCEEEEEEEECSSSCBCCEEETCCCCT--TTSCTT----
T ss_pred CCCeEEEEEEEEEEEEEcCCceEEEEEECCcccCCEEEEeCCCEEEEEEEECCCCCcceEeCCCCCCc--cccCCc----
Confidence 45678999999999999999999999999999999999999999999999999999999999999875 699986
Q ss_pred CccCCCCeEEEEEEeC-CCcccC
Q 043378 111 CPIQTGQGCVYNFTIV-GQRGKL 132 (162)
Q Consensus 111 ~~I~PG~~~tY~f~~~-~~~Gt~ 132 (162)
+.|+||++|+|+|+++ +++|||
T Consensus 87 ~~I~PG~~~~Y~f~~~~~~~GT~ 109 (439)
T 2xu9_A 87 LEIPPGESWTYEFTVPKELAGTF 109 (439)
T ss_dssp CCBCTTCEEEEEEECCSSCCEEE
T ss_pred ccCCCCCeEEEEEecCCCCCcce
Confidence 4699999999999985 479998
No 17
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=99.93 E-value=4.8e-26 Score=200.80 Aligned_cols=114 Identities=19% Similarity=0.264 Sum_probs=98.3
Q ss_pred ceEEEEEEEEEEEEec--CCeeeEEEEECCCCCCceEEEecCCEEEEEEEecCCC----------------------Cee
Q 043378 33 ITRHCKFDIKLQNATR--LCHTKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQN----------------------NIS 88 (162)
Q Consensus 33 ~~~~~~l~i~~~~~~~--~g~~~~~~~~Ng~~PGP~I~v~~Gd~v~v~v~N~l~~----------------------~~s 88 (162)
...+|+|++++.+.++ ++.++++|+|||++|||+|++++||+|+|+|+|++++ +|+
T Consensus 24 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~L~~~~~~~~~~t~~~~~~~~~~~~~~ts 103 (513)
T 2wsd_A 24 EKTYYEVTMEECTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTV 103 (513)
T ss_dssp SCEEEEEEEEEEEECSSTTSCCEEEEEETTBSSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTSCC-----CCCSCCBC
T ss_pred CceEEEEEEEEeeeeeCCCCCCceEEEECCCccCceEEECCCCEEEEEEEeCCCccccCccccccccccccccCCCCCcE
Confidence 3566999999998876 3568999999999999999999999999999999976 899
Q ss_pred EEeeccccCCCCCCCCCcc--ccCCccCCCCeE---EEEEEeCCCcccC-----------------------------CC
Q 043378 89 IHWHGIGQLRSGWADGPAY--ITQCPIQTGQGC---VYNFTIVGQRGKL-----------------------------SP 134 (162)
Q Consensus 89 iH~HGl~~~~~~~~DG~~~--vtq~~I~PG~~~---tY~f~~~~~~Gt~-----------------------------~~ 134 (162)
|||||+++++. +||+|+ +++|+|+||++| +|+|++.+++||| .+
T Consensus 104 iHwHGl~~~~~--~DG~p~~~i~~g~i~pG~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~ 181 (513)
T 2wsd_A 104 VHLHGGVTPDD--SDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKEKR 181 (513)
T ss_dssp EEEETCCCCGG--GSCCTTSCBCGGGSSBCTTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGGGG
T ss_pred EEcCCCcCCCc--cCCCCcccccCCcccCCCccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEecccccc
Confidence 99999999854 999995 789999999555 9999986689999 12
Q ss_pred CCCCCCCceEEEEh
Q 043378 135 NPFAEPYKEVPLIF 148 (162)
Q Consensus 135 ~p~p~~dre~~l~l 148 (162)
.++|++|+|++|+|
T Consensus 182 ~~lp~~d~d~~l~l 195 (513)
T 2wsd_A 182 LKLPSDEYDVPLLI 195 (513)
T ss_dssp GCCCCGGGEEEEEE
T ss_pred ccCCCCCCcEEEEE
Confidence 23567799999998
No 18
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=99.93 E-value=6.8e-26 Score=185.74 Aligned_cols=93 Identities=26% Similarity=0.334 Sum_probs=82.7
Q ss_pred cccceEEEEEEEEEEEEecCCeeeEEEEECCCCCCceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCcccc
Q 043378 30 AFGITRHCKFDIKLQNATRLCHTKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPAYIT 109 (162)
Q Consensus 30 a~~~~~~~~l~i~~~~~~~~g~~~~~~~~Ng~~PGP~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~~vt 109 (162)
+++.+|+|+|+|++.+ .+......+.|||++|||+||+++||+|+|+|+|+++++++|||||++++.. +||++ ++
T Consensus 3 ~~g~~~~~~l~~~~~~--~~~~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~~~~~~siH~HG~~~~~~--~DG~~-~t 77 (276)
T 3kw8_A 3 AGGEVRHLKMYAEKLA--DGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEIS--SDGTA-MN 77 (276)
T ss_dssp -CCCEEEEEEEEEECT--TSCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCGG--GSCCT-TT
T ss_pred CcceEEEEEEEEEeCC--CCceecceeccCCcccCCeEEEECCCEEEEEEEECCCCCccEeecCcccCCc--cCCCc-CC
Confidence 4678999999999853 3344556788999999999999999999999999999999999999999864 99999 89
Q ss_pred CCccCCCCeEEEEEEeCC
Q 043378 110 QCPIQTGQGCVYNFTIVG 127 (162)
Q Consensus 110 q~~I~PG~~~tY~f~~~~ 127 (162)
||+|+||++++|+|++++
T Consensus 78 ~~~i~pG~~~~Y~f~~~~ 95 (276)
T 3kw8_A 78 KSDVEPGGTRTYTWRTHK 95 (276)
T ss_dssp TCSBCTTCEEEEEEECCC
T ss_pred cCCCCCCCEEEEEEEcCC
Confidence 999999999999999953
No 19
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=99.93 E-value=8.6e-26 Score=187.34 Aligned_cols=117 Identities=22% Similarity=0.316 Sum_probs=93.5
Q ss_pred ccccccceEEEEEEEEEEEEecCCeeeEEEEECCCCCCceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCc
Q 043378 27 AEPAFGITRHCKFDIKLQNATRLCHTKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPA 106 (162)
Q Consensus 27 ~~~a~~~~~~~~l~i~~~~~~~~g~~~~~~~~Ng~~PGP~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~ 106 (162)
+..+.+.+|+++|.+++..-++ ..+.++.+||++|||+||+++||+|+|+|+|++++++||||||+++++. +||++
T Consensus 22 p~~~~~~~~~~~~~a~~~~~~~--~~~~~~~~~gt~PGP~i~~~~GD~v~v~~~N~l~~~~siH~HG~~~~~~--~DG~~ 97 (299)
T 3t9w_A 22 PVRAQGTTRRITMYAEKISDEL--YGYGLAPGGATVPGPVLEMWEGDTLEIDLVNTTDRVLSLHPHGVDYDVN--SDGTL 97 (299)
T ss_dssp -----CCEEEEEEEEEEEETTE--EEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCGG--GSCCT
T ss_pred CcccCCCEEEEEEEEEecCCCc--eeeeecCCCCCccCceEEEECCeEEEEEEEECCCCCccEEeCCcccCCc--cCCCc
Confidence 4455888999999998765322 2344566799999999999999999999999999999999999998765 99997
Q ss_pred cccCCccCCCCeEEEEEEeC------------CCcccC--------------------------CCCCCCCCCceEEEEh
Q 043378 107 YITQCPIQTGQGCVYNFTIV------------GQRGKL--------------------------SPNPFAEPYKEVPLIF 148 (162)
Q Consensus 107 ~vtq~~I~PG~~~tY~f~~~------------~~~Gt~--------------------------~~~p~p~~dre~~l~l 148 (162)
++||+|+||++++|+|+++ +++||| .+..-+.+|||+++++
T Consensus 98 -~~~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~~~~d~e~~l~~ 176 (299)
T 3t9w_A 98 -MNGSAVMPGQTRRYTWRSHVGYRRADGSWAEGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGDLLPKRQFTVVF 176 (299)
T ss_dssp -TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCCCCSEEEEEEE
T ss_pred -cccCccCCCCeEEEEEEeecccccCCCcCCCCCceeEEEecCCcccccchhhhcccccceEEEecccccCccccceeee
Confidence 7999999999999999984 257887 1112347899999888
No 20
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=99.93 E-value=3.6e-26 Score=202.87 Aligned_cols=95 Identities=19% Similarity=0.207 Sum_probs=86.0
Q ss_pred ceEEEEEEEEEEEE--ecCCeeeEEEEECCCCCCceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCccccC
Q 043378 33 ITRHCKFDIKLQNA--TRLCHTKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPAYITQ 110 (162)
Q Consensus 33 ~~~~~~l~i~~~~~--~~~g~~~~~~~~Ng~~PGP~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~~vtq 110 (162)
.+++|+|++++.+. .++|.++.+|+|||++|||+|++++||+|+|+|+|+++++++|||||++++.. +||++ |
T Consensus 35 ~~~~~~l~~~~~~~~~~p~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~~--~DG~~---~ 109 (534)
T 3abg_A 35 EIWYYEVEIKPFTHQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNAEAPNSVHLHGSFSRAA--FDGWA---E 109 (534)
T ss_dssp CCEEEEEEEECCEECCSTTTCCEECBEETSCSSEEEEEEETTCCEEEEEEECSSSCBCEEEETCCCCTT--TTTCS---S
T ss_pred ceEEEEEEEEEEEEEecCCCCceeEEEECCcCcCceEEEeCCcEEEEEEEECCCCCceEEECCCcCCCC--CCCCC---C
Confidence 35789999997664 45788899999999999999999999999999999999999999999999864 99975 7
Q ss_pred CccCCCCeEEEEEEeCCCcccC
Q 043378 111 CPIQTGQGCVYNFTIVGQRGKL 132 (162)
Q Consensus 111 ~~I~PG~~~tY~f~~~~~~Gt~ 132 (162)
|+|+||++++|+|++.+++|||
T Consensus 110 ~~i~PG~~~~Y~f~~~~~~GT~ 131 (534)
T 3abg_A 110 DITEPGSFKDYYYPNRQSARTL 131 (534)
T ss_dssp SCBSSCSCCCEEECCCSSSCEE
T ss_pred CCCCCCCeEEEEEecCCcceeE
Confidence 9999999999999996667898
No 21
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=99.92 E-value=8.9e-25 Score=196.75 Aligned_cols=112 Identities=19% Similarity=0.289 Sum_probs=99.3
Q ss_pred cceEEEEEEEEEEEEecC--CeeeEEEEECCCCCCceEEEecCCEEEEEEEecCCCC-----------------------
Q 043378 32 GITRHCKFDIKLQNATRL--CHTKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNN----------------------- 86 (162)
Q Consensus 32 ~~~~~~~l~i~~~~~~~~--g~~~~~~~~Ng~~PGP~I~v~~Gd~v~v~v~N~l~~~----------------------- 86 (162)
...++|+|++++.+.++. +.++++|+|||++|||+|++++||+|+|+++|+++++
T Consensus 30 ~~~~~~~l~~~~~~~~l~~~~~~t~~~~ynG~~PGPtI~~~~Gd~v~V~~~N~L~~~~~~~~~~~~~p~~~~g~p~~~~~ 109 (612)
T 2g23_A 30 EVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTE 109 (612)
T ss_dssp CTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGS
T ss_pred CCeEEEEEEEEEEEEEECCCCcceEEEEECCccCCceEEEECCeEeeEEEEECcCCcccccccccccccccCCCcccccc
Confidence 346889999999998863 4689999999999999999999999999999999863
Q ss_pred ------------------eeEEeeccccCCCCCCCCCccccCCccCCCCeEEEEEEeCCCcccC----------------
Q 043378 87 ------------------ISIHWHGIGQLRSGWADGPAYITQCPIQTGQGCVYNFTIVGQRGKL---------------- 132 (162)
Q Consensus 87 ------------------~siH~HGl~~~~~~~~DG~~~vtq~~I~PG~~~tY~f~~~~~~Gt~---------------- 132 (162)
+++||||+++++. +||++ ||+|+||++++|+|++.+++|||
T Consensus 110 p~~~g~~~~~~~~~~~~~tsiH~HG~~~~~~--~DG~p---~~~i~PG~s~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~ 184 (612)
T 2g23_A 110 PGRGGVEPNKDVAALPAWSVTHLHGAQTGGG--NDGWA---DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMA 184 (612)
T ss_dssp CSCTTCCCCHHHHTCCCCBCEEEETCCCCTT--TSCCG---GGCBCTTCEEEEEECCCSCSCEEEEEECCTTTHHHHTTT
T ss_pred cccccccccccccccCCceEEEcCCCCCCCc--cCCCC---cCCCCCCCeEEEEEEecCCCceEEEecccCCcchhhhhc
Confidence 8999999999876 99986 89999999999999996689998
Q ss_pred -------------CCCCCCCCCceEEEEh
Q 043378 133 -------------SPNPFAEPYKEVPLIF 148 (162)
Q Consensus 133 -------------~~~p~p~~dre~~l~l 148 (162)
...++|++|+|++|+|
T Consensus 185 GL~G~liV~~~~~~~~~lp~~d~d~~l~l 213 (612)
T 2g23_A 185 GLYGTYLVRDDEEDALGLPSGDREIPLLI 213 (612)
T ss_dssp TCEEEEEEECHHHHTTTCCCGGGEEEEEE
T ss_pred cceeEEEEcCcccccccCCCCcceEEEEE
Confidence 2345678899999999
No 22
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=99.91 E-value=1.6e-24 Score=180.46 Aligned_cols=91 Identities=24% Similarity=0.341 Sum_probs=78.7
Q ss_pred ccccceEEEEEEEEEEEEecCC-eeeEEEEECCCCCCceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCcc
Q 043378 29 PAFGITRHCKFDIKLQNATRLC-HTKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPAY 107 (162)
Q Consensus 29 ~a~~~~~~~~l~i~~~~~~~~g-~~~~~~~~Ng~~PGP~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~~ 107 (162)
-+.+.+|+++|.+++. .+| ....++.+|+++|||+||+++||+|+|+|+|++++++||||||++++.. +||++
T Consensus 8 p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~t~PGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~--~dG~~- 81 (313)
T 3tas_A 8 PAGGEVKRIKLYAERL---GGGQMGYGLEKGKATIPGPLIELNEGDTLHIEFENTMDVPVSLHVHGLDYEIS--SDGTK- 81 (313)
T ss_dssp CCCCCEEEEEEEEEEC---GGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCGG--GSCST-
T ss_pred CCCceEEEEEEEEEEc---CCCceeeeeecCCccccCCeEEEECCCEEEEEEEECCCCCccEeecCCcCCcc--CCCCc-
Confidence 3467889999987532 344 3455677899999999999999999999999999999999999999765 99998
Q ss_pred ccCCccCCCCeEEEEEEe
Q 043378 108 ITQCPIQTGQGCVYNFTI 125 (162)
Q Consensus 108 vtq~~I~PG~~~tY~f~~ 125 (162)
.+||+|+||++++|+|++
T Consensus 82 ~~~~~i~PG~~~~Y~~~~ 99 (313)
T 3tas_A 82 QSRSDVEPGGTRTYTWRT 99 (313)
T ss_dssp TTTCCBCTTCEEEEEEBC
T ss_pred cccCCcCCCCEEEEEEEe
Confidence 589999999999999987
No 23
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=99.91 E-value=4.6e-24 Score=201.77 Aligned_cols=107 Identities=18% Similarity=0.243 Sum_probs=85.1
Q ss_pred hccccccceEEEEEEEEEEEEecC--C--------------------------eeeEEE-------EECCC--------C
Q 043378 26 LAEPAFGITRHCKFDIKLQNATRL--C--------------------------HTKSIV-------SVNGK--------F 62 (162)
Q Consensus 26 ~~~~a~~~~~~~~l~i~~~~~~~~--g--------------------------~~~~~~-------~~Ng~--------~ 62 (162)
++..+.+.+|+|.+.|++..++.. + +.++++ .||+. +
T Consensus 13 ~~~~~~~~~r~y~i~~~~~~w~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~ 92 (1065)
T 2j5w_A 13 CSTPAWAKEKHYYIGIIETTWDYASDHGEKKLISVDTEHSNIYLQNGPDRIGRLYKKALYLQYTDETFRTTIEKPVWLGF 92 (1065)
T ss_dssp -------CEEEEEEEEEEEEEESCCCCCCCBBTTBCSSSTHHHHCCCSSCCCSEEEEEEEEEESSSSTTSBCCCCGGGTT
T ss_pred hccccccceeEEEEEEEEEEeecCCCCcCCCccccchhhhheecccCCcccCCeEeEEEEEEecceeecCCcccccccCC
Confidence 346667899999999999876432 2 223344 57776 9
Q ss_pred CCceEEEecCCEEEEEEEecCCCCeeEEeeccccCC----CCCCCCCcc--ccCCccCCCCeEEEEEEeCCC--------
Q 043378 63 PGPRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLR----SGWADGPAY--ITQCPIQTGQGCVYNFTIVGQ-------- 128 (162)
Q Consensus 63 PGP~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~----~~~~DG~~~--vtq~~I~PG~~~tY~f~~~~~-------- 128 (162)
|||+||+++||+|+|+|+|+++++++|||||++++. .+|+||+++ ++||+|+||++|+|+|+++++
T Consensus 93 PGP~Ir~~~GD~v~v~v~N~l~~~tsiHwHGl~~~~~~DG~~~~dg~~g~~~t~~~I~PG~t~tY~f~~~~~~gp~~~d~ 172 (1065)
T 2j5w_A 93 LGPIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGEGDG 172 (1065)
T ss_dssp SCCCEEEETTCEEEEEEEEESSSCBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECCSTTSCCTTSC
T ss_pred cCCeEEEeCCeEEEEEEEECCCCCeeEEeCCccCCcccCCcccCCCCCcccccccccCCCCEEEEEEEeccccCCccCCC
Confidence 999999999999999999999999999999999974 467888888 899999999999999999654
Q ss_pred -cccC
Q 043378 129 -RGKL 132 (162)
Q Consensus 129 -~Gt~ 132 (162)
+|||
T Consensus 173 ~aGT~ 177 (1065)
T 2j5w_A 173 NCVTR 177 (1065)
T ss_dssp SEEEE
T ss_pred CceEE
Confidence 4998
No 24
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=99.89 E-value=7.5e-23 Score=171.20 Aligned_cols=110 Identities=16% Similarity=0.211 Sum_probs=96.5
Q ss_pred ccceEEEEEEEEEEEEec-CCeeeEEEEECCCCCCceEEEecCCEEEEEEEecCC--CCeeEEeeccccCCCCCCCCCcc
Q 043378 31 FGITRHCKFDIKLQNATR-LCHTKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQ--NNISIHWHGIGQLRSGWADGPAY 107 (162)
Q Consensus 31 ~~~~~~~~l~i~~~~~~~-~g~~~~~~~~Ng~~PGP~I~v~~Gd~v~v~v~N~l~--~~~siH~HGl~~~~~~~~DG~~~ 107 (162)
.+++++|+|++++.++++ +|.++.+|+|||++|||+|++++||+|+|+++|.++ .++++||||+.. +||.+.
T Consensus 35 ~~~~~~~~l~~~~~~~~~~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~~-----~dG~~~ 109 (327)
T 1kbv_A 35 YPAKVRVKMETVEKTMKMDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAATG-----QGGGAA 109 (327)
T ss_dssp SCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGTT
T ss_pred CCCEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCeEEEeCCCEEEEEEEECCCCCCceeeEeCcccc-----CCCCCc
Confidence 568899999999999998 799999999999999999999999999999999986 589999999852 788775
Q ss_pred ccCCccCCCCeEEEEEEeCCCcccC------------------------CCCCCCCCCceEEEEh
Q 043378 108 ITQCPIQTGQGCVYNFTIVGQRGKL------------------------SPNPFAEPYKEVPLIF 148 (162)
Q Consensus 108 vtq~~I~PG~~~tY~f~~~~~~Gt~------------------------~~~p~p~~dre~~l~l 148 (162)
. ..|.||++++|+|++ +++||| .+.+.|++|+|+++++
T Consensus 110 ~--~~i~PG~~~~y~f~~-~~~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~~~~~~p~~d~e~~l~~ 171 (327)
T 1kbv_A 110 A--TFTAPGRTSTFSFKA-LQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEGLPKVDKEFYIVQ 171 (327)
T ss_dssp T--TCBCTTEEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTCCCCCSEEEEEEE
T ss_pred c--eeecCCCEEEEEEEC-CCCeEEEEEeCCCChhhhhhcceEEEEEEecCCCCCCCceEEEEEe
Confidence 3 359999999999999 679998 2234678899988887
No 25
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=99.89 E-value=3.9e-24 Score=186.05 Aligned_cols=72 Identities=21% Similarity=0.449 Sum_probs=68.6
Q ss_pred EEECCC-CCCceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCccccCCccCCCCeEEEEEEeCCCcccC
Q 043378 56 VSVNGK-FPGPRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPAYITQCPIQTGQGCVYNFTIVGQRGKL 132 (162)
Q Consensus 56 ~~~Ng~-~PGP~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~~vtq~~I~PG~~~tY~f~~~~~~Gt~ 132 (162)
|+|||+ +|||+|++++||+|+|+|+|+++++++|||||+++++ ++||+|+ |+|+||++|+|+|++++++|||
T Consensus 28 ~~~Ng~~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~--~~DG~~~---~~i~PG~~~~Y~f~~~~~~GT~ 100 (448)
T 3aw5_A 28 SGYMAEGVLNPTIILRRGQRVDMTLKNKLTEPTIVHWHGFDVNW--HNDAHPS---FAITPGESYNYSFDVVNRAGTY 100 (448)
T ss_dssp TEEEETTEESCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCH--HHHTCGG---GCBCTTCEEEEEEECCSCSEEE
T ss_pred EEECCccccCceEEEeCCCEEEEEEEECCCCceeEEeCCccCCC--ccCCCCC---ccCCCCCEEEEEEEcCCCCCce
Confidence 999999 9999999999999999999999999999999999975 4999986 9999999999999996689998
No 26
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=99.88 E-value=5.3e-22 Score=171.28 Aligned_cols=111 Identities=19% Similarity=0.192 Sum_probs=97.2
Q ss_pred cccceEEEEEEEEEEEEec-CCeeeEEEEECCCCCCceEEEecCCEEEEEEEecCC--CCeeEEeeccccCCCCCCCCCc
Q 043378 30 AFGITRHCKFDIKLQNATR-LCHTKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQ--NNISIHWHGIGQLRSGWADGPA 106 (162)
Q Consensus 30 a~~~~~~~~l~i~~~~~~~-~g~~~~~~~~Ng~~PGP~I~v~~Gd~v~v~v~N~l~--~~~siH~HGl~~~~~~~~DG~~ 106 (162)
+.+.+++|+|++++.++++ +|.++.+|+|||++|||+|++++||+|+|+|+|.++ .+|+|||||+.. +||.+
T Consensus 24 ~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~-----~dG~~ 98 (442)
T 2zoo_A 24 DHSAKVVINLETREQVGRIADGVEYVFWSFGETVPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTG-----PGGGA 98 (442)
T ss_dssp SSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGG
T ss_pred CCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCcCCCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCcC-----CCCCC
Confidence 3678899999999999996 799999999999999999999999999999999986 499999999863 68877
Q ss_pred cccCCccCCCCeEEEEEEeCCCcccC------------------------CCCCCCCCCceEEEEh
Q 043378 107 YITQCPIQTGQGCVYNFTIVGQRGKL------------------------SPNPFAEPYKEVPLIF 148 (162)
Q Consensus 107 ~vtq~~I~PG~~~tY~f~~~~~~Gt~------------------------~~~p~p~~dre~~l~l 148 (162)
..+ +|+||++++|+|++ +++||| ...+.|++|+|+++++
T Consensus 99 ~~~--~i~pg~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~~~~~~d~e~~l~l 161 (442)
T 2zoo_A 99 ESS--FTAPGHTSTFNFKA-LNPGLYIYHCATAPVGMHIANGMYGLILVEPKEGLAPVDREYYLVQ 161 (442)
T ss_dssp GGC--CBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTCCCCCSEEEEEEE
T ss_pred ccE--EECCCCEEEEEEEc-CCCeEEEEecCCCChHHHHhCccEEEEEEeCCCCCCCCCceEEEEe
Confidence 543 69999999999999 689998 2234567899999988
No 27
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=99.86 E-value=1.3e-21 Score=163.55 Aligned_cols=96 Identities=19% Similarity=0.243 Sum_probs=85.2
Q ss_pred ccceEEEEEEEEEEEEec-CCeeeEEEEECCCCCCceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCcccc
Q 043378 31 FGITRHCKFDIKLQNATR-LCHTKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPAYIT 109 (162)
Q Consensus 31 ~~~~~~~~l~i~~~~~~~-~g~~~~~~~~Ng~~PGP~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~~vt 109 (162)
.+.+++|+|++++.++++ +|.++.+|+|||++|||+|++++||+|+|+|+|. .+++||||++++.....||.+.++
T Consensus 29 ~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~---~~~~h~Hg~~~~~~~~~~~~~~~~ 105 (333)
T 1mzy_A 29 GPVINEFEMRIIEKEVQLDEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLINP---PENTMPHNIDFHAATGALGGGGLT 105 (333)
T ss_dssp SCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEC---TTCCSCBCCEETTSCSGGGGGGGC
T ss_pred CCcEEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCcEEecCCCEEEEEEEEC---CCCcccccceecCCCCCCCCCcee
Confidence 668899999999999988 5999999999999999999999999999999999 478999999987654455555665
Q ss_pred CCccCCCCeEEEEEEeCCCcccC
Q 043378 110 QCPIQTGQGCVYNFTIVGQRGKL 132 (162)
Q Consensus 110 q~~I~PG~~~tY~f~~~~~~Gt~ 132 (162)
.|+||++++|+|++ +++|||
T Consensus 106 --~i~PG~~~~y~f~~-~~~Gt~ 125 (333)
T 1mzy_A 106 --LINPGEKVVLRFKA-TRAGAF 125 (333)
T ss_dssp --CBCTTEEEEEEEEC-CSCEEE
T ss_pred --EeCCCCEEEEEEEC-CCCEEE
Confidence 49999999999999 579987
No 28
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=99.86 E-value=3.1e-21 Score=161.29 Aligned_cols=96 Identities=21% Similarity=0.295 Sum_probs=80.9
Q ss_pred ccceEEEEEEEEEEEEec--CCeeeEEEEECCCCCCceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCccc
Q 043378 31 FGITRHCKFDIKLQNATR--LCHTKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPAYI 108 (162)
Q Consensus 31 ~~~~~~~~l~i~~~~~~~--~g~~~~~~~~Ng~~PGP~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~~v 108 (162)
.+.+++|+|++++.++++ ||.++.+|+|||++|||+|++++||+|+|+++|++. ++||||+++.+..++||.+.+
T Consensus 29 ~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~---~~~~h~~~~h~~~~~~~~~~~ 105 (336)
T 1oe1_A 29 GPKVVEFTMTIEEKKMVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPAT---NAMPHNVDFHGATGALGGAKL 105 (336)
T ss_dssp CCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCCEEEETTCEEEEEEEECTT---CCSCBCCEETTSCSGGGGGGG
T ss_pred CCcEEEEEEEEEEEEEEECCCCcEEEEEEECCccCCCeEEEcCCCEEEEEEEcCCC---CCccccceECCCCCCCCCcce
Confidence 567899999999999876 499999999999999999999999999999999974 345555555544456776666
Q ss_pred cCCccCCCCeEEEEEEeCCCcccC
Q 043378 109 TQCPIQTGQGCVYNFTIVGQRGKL 132 (162)
Q Consensus 109 tq~~I~PG~~~tY~f~~~~~~Gt~ 132 (162)
++ |+||++++|+|++ +++|||
T Consensus 106 ~~--i~pG~~~~y~f~~-~~~Gt~ 126 (336)
T 1oe1_A 106 TN--VNPGEQATLRFKA-DRSGTF 126 (336)
T ss_dssp CC--BCTTEEEEEEEEC-CSCEEE
T ss_pred EE--eCCCCEEEEEEEC-CCCeEE
Confidence 54 9999999999999 579998
No 29
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=99.84 E-value=4.9e-21 Score=160.31 Aligned_cols=97 Identities=18% Similarity=0.224 Sum_probs=83.7
Q ss_pred cccceEEEEEEEEEEEEecC--CeeeEEEEECCCCCCceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCcc
Q 043378 30 AFGITRHCKFDIKLQNATRL--CHTKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPAY 107 (162)
Q Consensus 30 a~~~~~~~~l~i~~~~~~~~--g~~~~~~~~Ng~~PGP~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~~ 107 (162)
+.+.+++|+|++++.+++++ |..+.+|+|||++|||+|++++||+|+|+++|.+ +++||||+++.+....||.+.
T Consensus 34 ~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~---~~~~~hg~~~~~~~~~~~~~~ 110 (340)
T 2bw4_A 34 TGPRVVEFTMTIEEKKLVIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINPD---TNTLLHNIDFHAATGALGGGA 110 (340)
T ss_dssp SSCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCEEEEETTCEEEEEEEECT---TCCSCBCCEETTSCSGGGGGG
T ss_pred CCCcEEEEEEEEEEEEEEECCCCcEEEEEEECCCCCCCcEEEcCCCEEEEEEEeCC---CCCccCcceeCCcCCCCCCcc
Confidence 36688999999999998864 9999999999999999999999999999999998 678999998876533444444
Q ss_pred ccCCccCCCCeEEEEEEeCCCcccC
Q 043378 108 ITQCPIQTGQGCVYNFTIVGQRGKL 132 (162)
Q Consensus 108 vtq~~I~PG~~~tY~f~~~~~~Gt~ 132 (162)
++ .|.||++++|+|++ +++|||
T Consensus 111 ~~--~i~PG~~~~y~~~~-~~~Gt~ 132 (340)
T 2bw4_A 111 LT--QVNPGEETTLRFKA-TKPGVF 132 (340)
T ss_dssp GC--CBCTTEEEEEEEEC-CSCEEE
T ss_pred ce--EeCCCCEEEEEEEC-CCCeEE
Confidence 54 49999999999999 579998
No 30
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=99.83 E-value=5.8e-21 Score=161.06 Aligned_cols=90 Identities=24% Similarity=0.335 Sum_probs=76.3
Q ss_pred ccceEEEEEEEEEEEEecCCee-eEEEEECCCCCCceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCcccc
Q 043378 31 FGITRHCKFDIKLQNATRLCHT-KSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPAYIT 109 (162)
Q Consensus 31 ~~~~~~~~l~i~~~~~~~~g~~-~~~~~~Ng~~PGP~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~~vt 109 (162)
.+++++|+|++++.. +|.. ...+.+||++|||+|++++||+|+|+|+|.++++++|||||++++. ++||++ ++
T Consensus 45 ~g~~~~~~l~~~~~~---~~~~~~~~~~~ng~~pGP~I~v~~Gd~v~v~~~N~l~~~~sih~HG~~~~~--~~DG~~-~t 118 (343)
T 3cg8_A 45 GGEVRHLKMYAEKLA---DGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEI--SSDGTA-MN 118 (343)
T ss_dssp CCCEEEEEEEEEECG---GGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCG--GGSCCT-TT
T ss_pred CCeEEEEEEEEEEcc---CCeeeeeeecCCCCccCCEEEEECCCEEEEEEEECCCCCeeEEecCcccCC--cCCCcc-cc
Confidence 567799999998752 3421 1122347999999999999999999999999999999999999874 599998 88
Q ss_pred CCccCCCCeEEEEEEeC
Q 043378 110 QCPIQTGQGCVYNFTIV 126 (162)
Q Consensus 110 q~~I~PG~~~tY~f~~~ 126 (162)
||+|+||++++|+|++.
T Consensus 119 ~~~I~PG~~~~y~f~~~ 135 (343)
T 3cg8_A 119 KSDVEPGGTRTYTWRTH 135 (343)
T ss_dssp TCSBCTTCEEEEEEECC
T ss_pred cccccCCCEEEEEEEeC
Confidence 99999999999999984
No 31
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=99.83 E-value=4.4e-21 Score=176.54 Aligned_cols=101 Identities=12% Similarity=0.037 Sum_probs=83.9
Q ss_pred cccceEEEEEEEEEEEE--ecCCe----------------e-eEEEEE-----CC-----------CCCCceEEEecCCE
Q 043378 30 AFGITRHCKFDIKLQNA--TRLCH----------------T-KSIVSV-----NG-----------KFPGPRIVAREGDQ 74 (162)
Q Consensus 30 a~~~~~~~~l~i~~~~~--~~~g~----------------~-~~~~~~-----Ng-----------~~PGP~I~v~~Gd~ 74 (162)
..+.+|+|.|.+++... .+++. . ...+.| ++ ++|||+||+++||+
T Consensus 129 ~~g~~r~y~i~a~e~~wdyap~~~~~~~~~~~~~~~g~~y~k~~~~~y~~~~f~~~~~~~~~~~~l~~pGP~Ir~~~GD~ 208 (770)
T 2r7e_B 129 FQKKTRHYFIAAVERLWDYGMSSSPHVLRNRAQSGSVPQFKKVVFQEFTDGSFTQPLYRGELNEHLGLLGPYIRAEVEDN 208 (770)
T ss_dssp CCCCCEEEEEEEEECCCCCCSCCCCTTTTSSCCCCCCCCCCCEEEEECSSSCTTTTCCCCSTTTTCCSCCCCCCCCSSSC
T ss_pred CCCCEEEEEEEEEEEEEeecCCCcccccccccccccccceeeEEEEEeccCceeccccccccccccCCCCCeEEEEcCCE
Confidence 36889999999999875 33432 1 223334 22 58999999999999
Q ss_pred EEEEEEecCCCCeeEEeeccccCCCCCCCCCccccCCccCCCCeEEEEEEeCC---------CcccC
Q 043378 75 LLIKVVKHVQNNISIHWHGIGQLRSGWADGPAYITQCPIQTGQGCVYNFTIVG---------QRGKL 132 (162)
Q Consensus 75 v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~~vtq~~I~PG~~~tY~f~~~~---------~~Gt~ 132 (162)
|+|+|+|+++++++|||||++++... .||+++ +||+|+||++|+|+|++++ ++|||
T Consensus 209 v~v~~~N~l~~~~siH~HG~~~~~~~-~dG~~~-~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~Gt~ 273 (770)
T 2r7e_B 209 IMVTFRNQASRPYSFYSSLISYEEDQ-RQGAEP-RKNFVKPNETKTYFWKVQHHMAPTKDEFDCKAW 273 (770)
T ss_dssp EEEEEECCSSSCCCCCBTTCCCCCCS-SSCTTT-TSSCCCSSCEEEEECCCCSSSSCCSSCCSEEEE
T ss_pred EEEEEEECCCCCcceeeccccccccc-CCCCcC-ccCccCCCCeEEEEEEecCccCCccCCCCCeeE
Confidence 99999999999999999999999884 259987 8999999999999999964 78998
No 32
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=99.82 E-value=4.7e-20 Score=166.22 Aligned_cols=96 Identities=18% Similarity=0.199 Sum_probs=69.2
Q ss_pred ccceEEEEEEEEEEEEecC--C------------eeeE--EEEE----------------CCCCCCceEEEecCCEEEEE
Q 043378 31 FGITRHCKFDIKLQNATRL--C------------HTKS--IVSV----------------NGKFPGPRIVAREGDQLLIK 78 (162)
Q Consensus 31 ~~~~~~~~l~i~~~~~~~~--g------------~~~~--~~~~----------------Ng~~PGP~I~v~~Gd~v~v~ 78 (162)
.+.+|+|.+-+++..+... + +-++ ...| +.++|||+|++++||+|+|+
T Consensus 3 ~~~~r~y~i~a~e~~w~y~~~~~~~~~~~~~~~~~y~k~v~~~ytd~~f~~~~~~~~~~~~~~~pGP~I~~~~Gd~v~v~ 82 (647)
T 1sdd_B 3 TGNRKYYYIAAEEISWDYSKFVQSDDVDYVPEDTVYKKVVFRKYLDSTFTKLDPQGEYEEHLGILGPVIRAEVDDVIQVR 82 (647)
T ss_dssp CCCEEEEEEEEEEEEEETTTTC--------CCCCEEEEEEEEEESSTTCCSBCCCCSTTGGGTTSCCCEEEETTCEEEEE
T ss_pred CCCeEEEEEEEEEEEEeCCCCCcccccCccccCCeEeEEEEEEecCCcccccccCCCcccccCCcCceEEEeCCCEEEEE
Confidence 4789999999999876432 1 2222 2344 23689999999999999999
Q ss_pred EEecCCCCeeEEeeccccCCCCCCCCCcccc--------CCccCCCCeEEEEEEeCCC
Q 043378 79 VVKHVQNNISIHWHGIGQLRSGWADGPAYIT--------QCPIQTGQGCVYNFTIVGQ 128 (162)
Q Consensus 79 v~N~l~~~~siH~HGl~~~~~~~~DG~~~vt--------q~~I~PG~~~tY~f~~~~~ 128 (162)
|+|+++++++|||||++++.. +||+|+++ ||+|+||++++|+|+++++
T Consensus 83 ~~N~l~~~~siH~HGl~~~~~--~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~ 138 (647)
T 1sdd_B 83 FKNLASRPYSLHAHGLSYEKS--SEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTR 138 (647)
T ss_dssp ECCCSSSCBCCEEETCC-----------------------CCBCTTCCEECCEECCTT
T ss_pred EEECCCCceEEecCcceeCCC--CCCccccCCCCcccccCcccCCCCeEEEEEECCcc
Confidence 999999999999999999754 99999876 8999999999999999654
No 33
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=99.78 E-value=5.6e-21 Score=175.21 Aligned_cols=93 Identities=14% Similarity=0.216 Sum_probs=76.4
Q ss_pred EEEEEEEEEEEEecC-CeeeEEEEECCCCCCceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCcc------
Q 043378 35 RHCKFDIKLQNATRL-CHTKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPAY------ 107 (162)
Q Consensus 35 ~~~~l~i~~~~~~~~-g~~~~~~~~Ng~~PGP~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~~------ 107 (162)
..-.+++++.+.++. |+.+..|+ ++|||+||+++||+|+|+|+|++++++||||||++++.. +||+|+
T Consensus 47 y~k~l~~~~~~~~~~~~~~~~~~~---~~pGP~Ir~~~GD~v~V~v~N~l~~~tsIHwHGl~~~~~--~DG~p~~Dg~~~ 121 (742)
T 2r7e_A 47 YKKTLFVEFTDHLFNIAKPRPPWM---GLLGPTIQAEVYDTVVITLKNMASHPVSLHAVGVSYWKA--SEGAEYDDQTSQ 121 (742)
T ss_dssp EECCCCCCCSSSCCCCSSCSTTTT---TTSEEEEEECSEEEEECCEECCSSSCCCCCCSSSCCCSS--SSCCCSSCSCCS
T ss_pred EEEEEEEEecceEEECCccccccc---CCcCCeEEEECCCEEEEEEEECCCCCEeEEecCcccCcc--ccCCccCCCCcc
Confidence 333556666555664 66666654 899999999999999999999999999999999998754 677665
Q ss_pred --ccCCccCCCCeEEEEEEeCC---------CcccC
Q 043378 108 --ITQCPIQTGQGCVYNFTIVG---------QRGKL 132 (162)
Q Consensus 108 --vtq~~I~PG~~~tY~f~~~~---------~~Gt~ 132 (162)
++||+|+||++|+|+|++++ ++|||
T Consensus 122 ~~vtq~~I~PG~s~tY~f~v~~~~gP~~~d~~~GT~ 157 (742)
T 2r7e_A 122 REKEDDKVFPGGSHTYVWQVLKENGPMASDPLCLTY 157 (742)
T ss_dssp SSSSSSSCCTTCEECCEEEECGGGSCCSSSCSSCCE
T ss_pred cccccCcCCCCCeEEEEEEeccccCCCcCCCCcEEE
Confidence 88999999999999999853 46998
No 34
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=99.78 E-value=2.7e-19 Score=148.36 Aligned_cols=72 Identities=22% Similarity=0.427 Sum_probs=61.1
Q ss_pred EEEECCCCCCceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCcc------cc--CCccCCCCeEEEEEEeC
Q 043378 55 IVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPAY------IT--QCPIQTGQGCVYNFTIV 126 (162)
Q Consensus 55 ~~~~Ng~~PGP~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~~------vt--q~~I~PG~~~tY~f~~~ 126 (162)
...+| ++|||+|++++||+|+|+|+|.++++++|||||++.+.. +||++. ++ ||+|+||++++|+|+++
T Consensus 51 ~~~~n-~~pGP~I~v~~Gd~v~v~~~N~l~~~~siH~HGl~~~~~--~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~ 127 (306)
T 1sdd_A 51 QSRTS-GLLGPTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSKF--SEGASYSDHTLPMEKMDDAVAPGQEYTYEWIIS 127 (306)
T ss_dssp CCSSC-CSCCCCEEEETTCEEEEEEEECSSSCBCCEEESSCCCTT--TSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECC
T ss_pred ccccC-CccCCEEEEeCCCEEEEEEEECCCCcccEeecceecccc--cCCCccCCCCcccccCCCccCCCCeEEEEEEeC
Confidence 34567 689999999999999999999999999999999996554 666654 33 79999999999999996
Q ss_pred CCc
Q 043378 127 GQR 129 (162)
Q Consensus 127 ~~~ 129 (162)
+++
T Consensus 128 ~~~ 130 (306)
T 1sdd_A 128 EHS 130 (306)
T ss_dssp GGG
T ss_pred Ccc
Confidence 443
No 35
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=99.73 E-value=3.2e-17 Score=141.26 Aligned_cols=110 Identities=21% Similarity=0.255 Sum_probs=91.7
Q ss_pred ccceEEEEEEEEEEEEec-CCeeeEEEEECCCCCCceEEEecCCEEEEEEEecCC--CCeeEEeeccccCCCCCCCCCcc
Q 043378 31 FGITRHCKFDIKLQNATR-LCHTKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQ--NNISIHWHGIGQLRSGWADGPAY 107 (162)
Q Consensus 31 ~~~~~~~~l~i~~~~~~~-~g~~~~~~~~Ng~~PGP~I~v~~Gd~v~v~v~N~l~--~~~siH~HGl~~~~~~~~DG~~~ 107 (162)
.+..+.|+|++++....+ +|....+|+|||++|||+|++++||++++++.|.++ ..++|||||+.. +||+|.
T Consensus 160 ~~~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~~~-----~DG~~~ 234 (447)
T 2dv6_A 160 QAKTVRIDLETVEVKGQLDDNTTYTYWTFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGATG-----PGGAAA 234 (447)
T ss_dssp CCCEEEEEEEEEEEEEEEETTEEEEEEEETTBBSCCCEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGGG
T ss_pred CCcEEEEEEEEEEEEEeccCCceeEEEEECCccCCCeEEecCCCEEEEEEEeCCCCceeEEEeeccccC-----CCCCCc
Confidence 346678888888777776 688999999999999999999999999999999985 579999999852 799886
Q ss_pred ccCCccCCCCeEEEEEEeCCCcccC------------------------CCCCCCCCCceEEEEh
Q 043378 108 ITQCPIQTGQGCVYNFTIVGQRGKL------------------------SPNPFAEPYKEVPLIF 148 (162)
Q Consensus 108 vtq~~I~PG~~~tY~f~~~~~~Gt~------------------------~~~p~p~~dre~~l~l 148 (162)
.+ .|.||++++|.|++ +++|+| ...+.|++|+|+++++
T Consensus 235 ~~--~i~pG~~~~~~~~~-~~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~~~P~~d~~~~~~~ 296 (447)
T 2dv6_A 235 FT--QTDPGEETVVTFKA-LIPGIYVYHCATPSVPTHITNGMYGLLLVEPEGGLPQVDREFYVMQ 296 (447)
T ss_dssp GC--CBCTTCEEEEEEEC-CSCEEEEEECCSSSHHHHHHTTCEEEEEEECTTCSCCCSEEEEEEE
T ss_pred cE--EeCCCCEEEEEEEC-CCCeEEEEEeCCCChHHHHhCCCEEEEEEeCCCCCCCCCeeEEEEe
Confidence 54 49999999999999 578998 2223567788887776
No 36
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=99.73 E-value=1.5e-18 Score=159.14 Aligned_cols=69 Identities=26% Similarity=0.396 Sum_probs=61.2
Q ss_pred CCCCceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCC-----CCccccCCccCCCCeEEEEEEeCCCcc
Q 043378 61 KFPGPRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWAD-----GPAYITQCPIQTGQGCVYNFTIVGQRG 130 (162)
Q Consensus 61 ~~PGP~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~D-----G~~~vtq~~I~PG~~~tY~f~~~~~~G 130 (162)
.+|||+||+++||+|+|+|+|++++++||||||+++. .+|+| |++.++||+|+||++|+|+|++++++|
T Consensus 448 g~pGP~Ir~~~GD~v~v~~~N~l~~~~siHwHGl~~~-~~~~DG~~~~G~~~~~~~~I~PG~t~tY~f~~~~~ag 521 (742)
T 2r7e_A 448 GILGPLLYGEVGDTLLIIFKNQASRPYNIYPHGITDV-RPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDG 521 (742)
T ss_dssp CSCCCCCCCBTTCEEECCEECCSSSCBCCEETTCSEE-CCTTCSCCSSSCSSTTTSCCBSSCEECCEEECCSTTS
T ss_pred CCCCCeEEEECCCEEEEEEEeCCCCCcCEEecccccC-CcccccccCCCCcccccccCCCCCeEEEEEEeccccC
Confidence 5899999999999999999999999999999999985 44565 566778999999999999999976554
No 37
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=99.41 E-value=9.4e-14 Score=131.55 Aligned_cols=77 Identities=17% Similarity=0.175 Sum_probs=70.6
Q ss_pred eeeEEEEECCCCCC--ceEEEecCCEEEEEEEecCCCCeeEEeeccccCC-CCCCCCCccccCCccCCCCeEEEEEEeCC
Q 043378 51 HTKSIVSVNGKFPG--PRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLR-SGWADGPAYITQCPIQTGQGCVYNFTIVG 127 (162)
Q Consensus 51 ~~~~~~~~Ng~~PG--P~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~-~~~~DG~~~vtq~~I~PG~~~tY~f~~~~ 127 (162)
....+.++||++|| |+|++.+||+|+++|.|... .+||||+++.+ +.|+||++.+| |+|.||.+++|+|.+ .
T Consensus 616 ~~~~~~~iNG~~~g~~P~l~~~~gd~v~~~v~~~g~---~~~~Hgl~~~g~t~~~dG~~~~t-~~i~pg~~~t~~~~~-~ 690 (1065)
T 2j5w_A 616 ESNKMHSMNGFMYGNQPGLTMCKGDSVVWYLFSAGN---EADVHGIYFSGNTYLWRGERRDT-ANLFPQTSLTLHMWP-D 690 (1065)
T ss_dssp HHTEEEEETTBCTTCCCCCEEETTCCEEEEEECCCS---TTCCEEEEETTCCEEETTEEESE-EEECTTCEEEEEECC-C
T ss_pred ccceEEEEeeEecCCCCceEEeCCCEEEEEEEcCCC---cceEEeeEEeCCceeecCeecce-EeecCCceEEEEEec-C
Confidence 45689999999999 88999999999999997754 49999999988 88999999999 999999999999999 5
Q ss_pred CcccC
Q 043378 128 QRGKL 132 (162)
Q Consensus 128 ~~Gt~ 132 (162)
++|||
T Consensus 691 ~~Gt~ 695 (1065)
T 2j5w_A 691 TEGTF 695 (1065)
T ss_dssp SCEEE
T ss_pred CCeEE
Confidence 99999
No 38
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=99.35 E-value=4.7e-13 Score=115.17 Aligned_cols=86 Identities=10% Similarity=0.147 Sum_probs=70.1
Q ss_pred ccceEEEEEEEEEEEEecCCeeeEEEEECCCCCCceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCccccC
Q 043378 31 FGITRHCKFDIKLQNATRLCHTKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPAYITQ 110 (162)
Q Consensus 31 ~~~~~~~~l~i~~~~~~~~g~~~~~~~~Ng~~PGP~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~~vtq 110 (162)
.+.++++++++++..+.++| .+.++||++ +|+|++++||+|+++++|.+...+++||||... .++
T Consensus 25 ~~~~~~~~~~~~~~~~~f~g---~~~~vNG~~-~p~i~v~~Gd~v~~~~~N~~~~~h~~~~~g~~~-----------~~~ 89 (447)
T 2dv6_A 25 APVVFTLRTGIAEGRMVYIG---VGGDIDHKI-NPTLVVHEGETVQVNLVNGEGAQHDVVVDQYAA-----------RSA 89 (447)
T ss_dssp CCEEEEEEEEEETTEEEEEE---ESGGGTTCB-SCCEEEETTCEEEEEEECSSSSCBCCEETTTTE-----------ECC
T ss_pred CCceEEEEEEecccEEEEec---cceeecCCc-CCeEEEcCCCEEEEEEEcCCCCceEEEEccCCc-----------ccc
Confidence 44556666666654555544 456899999 999999999999999999998889999998632 257
Q ss_pred CccCCCCeEEEEEEeCCCcccC
Q 043378 111 CPIQTGQGCVYNFTIVGQRGKL 132 (162)
Q Consensus 111 ~~I~PG~~~tY~f~~~~~~Gt~ 132 (162)
|+|+||++++|.|++ .++|||
T Consensus 90 ~~i~pG~~~~~~f~~-~~~Gt~ 110 (447)
T 2dv6_A 90 IVNGKNASSTFSFVA-SKVGEF 110 (447)
T ss_dssp CBCSTTBEEEEEEEC-CSCEEE
T ss_pred eecCCCCeEEEEEEc-CCCEEE
Confidence 999999999999999 468998
No 39
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=99.19 E-value=7.8e-11 Score=96.06 Aligned_cols=75 Identities=19% Similarity=0.255 Sum_probs=62.0
Q ss_pred EEECCCC--CCceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCc--------cccCCccCCCCeEEEEEEe
Q 043378 56 VSVNGKF--PGPRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPA--------YITQCPIQTGQGCVYNFTI 125 (162)
Q Consensus 56 ~~~Ng~~--PGP~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~--------~vtq~~I~PG~~~tY~f~~ 125 (162)
|++||+. ++|.|++++||+|++++.|...+.+++||||...... .||.. ......|.||++++|.|++
T Consensus 157 ~~iNG~~~~~~p~i~v~~G~~vri~l~N~~~~~Hp~HlHG~~f~v~--~~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~~ 234 (276)
T 3kw8_A 157 MTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGHRWADN--RTGILTGPDDPSRVIDNKITGPADSFGFQIIA 234 (276)
T ss_dssp TEETTCCTTCCCCEEEETTCEEEEEEEEESSCCEEEEETTCCEESS--SSSSCCSTTCCCCEESEEEECTTCEEEEEEET
T ss_pred cccceecccCCCCEEEecCCEEEEEEecCCCcceeEEEccceeEEe--ccCccCCCcccccCCccEEeCCCceEEEEEEe
Confidence 6899987 8899999999999999999999999999999876543 34431 1234568999999999998
Q ss_pred CC--CcccC
Q 043378 126 VG--QRGKL 132 (162)
Q Consensus 126 ~~--~~Gt~ 132 (162)
.+ ++|+|
T Consensus 235 ~~~~npG~w 243 (276)
T 3kw8_A 235 GEGVGAGAW 243 (276)
T ss_dssp TTTTCSEEE
T ss_pred ccCCCCCeE
Confidence 53 69998
No 40
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.07 E-value=2.8e-11 Score=84.29 Aligned_cols=73 Identities=15% Similarity=0.113 Sum_probs=55.2
Q ss_pred CCCCceEEEecCCEEEEEEEecCCCCeeEEeeccccCCC--CCCCCCccccCCccCCCCeEEEEEEeCCCcccCCCCC
Q 043378 61 KFPGPRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRS--GWADGPAYITQCPIQTGQGCVYNFTIVGQRGKLSPNP 136 (162)
Q Consensus 61 ~~PGP~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~--~~~DG~~~vtq~~I~PG~~~tY~f~~~~~~Gt~~~~p 136 (162)
+|++|+|++++||+|+ ++|.++.+|++||||...+.. ...||.+ .++..|.||++++|.|++++++|+|...+
T Consensus 15 ~f~p~~i~v~~Gd~V~--~~N~~~~~H~v~~~~~~~~~~~g~~~~~~~-~~~~~i~pG~~~~~~f~~~~~~G~y~y~C 89 (105)
T 3cvb_A 15 QFEPANVTVHPGDTVK--WVNNKLPPHNILFDDKQVPGASKELADKLS-HSQLMFSPGESYEITFSSDFPAGTYTYYC 89 (105)
T ss_dssp CEESSEEEECTTEEEE--EEECSSCCEEEEECTTSSGGGCHHHHHHHC-EEEEECSTTCEEEEEECTTSCSEEEEEEC
T ss_pred EEeCCEEEEcCCCEEE--EEECCCCCCeEEEeCCCCCccccccccccc-ccccccCCCCeEEEEEecCCCCeeEEEEe
Confidence 6788999999999975 679999999999999876531 0122221 24567999999999998756899984433
No 41
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=98.95 E-value=1.3e-09 Score=77.16 Aligned_cols=85 Identities=18% Similarity=0.133 Sum_probs=64.0
Q ss_pred EEEEEEEEEEEE-----ecCCeeeEE-EEECCCCCCceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCccc
Q 043378 35 RHCKFDIKLQNA-----TRLCHTKSI-VSVNGKFPGPRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPAYI 108 (162)
Q Consensus 35 ~~~~l~i~~~~~-----~~~g~~~~~-~~~Ng~~PGP~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~~v 108 (162)
+.|.+.+.+... ..++..... ..||++|+.+.|++++||+|+++++|.... +||+..+. .|.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~f~p~~i~v~~G~~V~~~~~n~d~~-----~H~~~i~~----~~~--- 69 (112)
T 1iby_A 2 HNFNVVINAYDTTIPELNVEGVTVKNIRAFNVLNEPETLVVKKGDAVKVVVENKSPI-----SEGFSIDA----FGV--- 69 (112)
T ss_dssp CCEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEESCEEEEETTCEEEEEEEECSSS-----CEEEEEGG----GTE---
T ss_pred CceeEEEEeccCccccEEeccEEEEEEEEEeeEEcCCEEEEeCCCEEEEEEEECCCC-----eEEEEEcC----CCc---
Confidence 356666665543 234666666 489999999999999999999999999865 56655432 222
Q ss_pred cCCccCCCCeEEEEEEeCCCcccCC
Q 043378 109 TQCPIQTGQGCVYNFTIVGQRGKLS 133 (162)
Q Consensus 109 tq~~I~PG~~~tY~f~~~~~~Gt~~ 133 (162)
+..+.||++++|.|.+ +++|+|.
T Consensus 70 -~~~i~pG~~~~~~f~~-~~~G~y~ 92 (112)
T 1iby_A 70 -QEVIKAGETKTISFTA-DKAGAFT 92 (112)
T ss_dssp -EEEECTTCEEEEEEEC-CSCEEEE
T ss_pred -eeEeCCCCEEEEEEEC-CCCEEEE
Confidence 3568999999999998 6899993
No 42
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=98.74 E-value=1.7e-08 Score=84.80 Aligned_cols=75 Identities=19% Similarity=0.244 Sum_probs=59.5
Q ss_pred EEECCCC--CCceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCc--------cccCCccCCCCeEEEEEEe
Q 043378 56 VSVNGKF--PGPRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPA--------YITQCPIQTGQGCVYNFTI 125 (162)
Q Consensus 56 ~~~Ng~~--PGP~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~--------~vtq~~I~PG~~~tY~f~~ 125 (162)
|++||+. ..|.|++++||+|++++.|.....+.+|+||...... .||.. ......|.||++++|.|++
T Consensus 198 ~~iNG~~~~~~~~l~v~~Ge~vri~l~N~g~~~HpfHlHGh~f~v~--~~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~~~ 275 (343)
T 3cg8_A 198 MTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGHRWADN--RTGILTGPDDPSRVIDNKITGPADSFGFQIIA 275 (343)
T ss_dssp TEETTCCTTCCCCEEEETTCEEEEEEEEESSCCEEEEETTCCEESS--SSSSCCSTTCCCCEESEEEECTTCEEEEEEET
T ss_pred ceecccCCCCCccEEeCCCCEEEEEEEcCCccccccEecCcEEEEe--ccCcccCCCCcccceeeEEeCCCCEEEEEEEE
Confidence 6899986 4689999999999999999999999999999875433 33321 1123458999999999996
Q ss_pred --CCCcccC
Q 043378 126 --VGQRGKL 132 (162)
Q Consensus 126 --~~~~Gt~ 132 (162)
.+++|+|
T Consensus 276 ~~~~~pG~w 284 (343)
T 3cg8_A 276 GEGVGAGAW 284 (343)
T ss_dssp TTTTCSEEE
T ss_pred CCCCCCeeE
Confidence 2579998
No 43
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.66 E-value=3.2e-08 Score=88.80 Aligned_cols=72 Identities=18% Similarity=0.139 Sum_probs=58.0
Q ss_pred CeeeEEEEECCCCCCceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCccccCCccCCCCeEEEEEEeCCCc
Q 043378 50 CHTKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPAYITQCPIQTGQGCVYNFTIVGQR 129 (162)
Q Consensus 50 g~~~~~~~~Ng~~PGP~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~~vtq~~I~PG~~~tY~f~~~~~~ 129 (162)
+.+..+|++|++|++|.|++++||+|+++++|.+...-. +||+..+. .|+ ...+.||++++|.|++ +++
T Consensus 498 ~v~V~m~~~n~~f~pp~I~V~~Gd~V~~~ltN~d~~~Dv--~Hgf~ip~----~gv----~~~i~PG~t~t~~Fta-~~p 566 (595)
T 1fwx_A 498 KVRVYMSSVAPSFSIESFTVKEGDEVTVIVTNLDEIDDL--THGFTMGN----YGV----AMEIGPQMTSSVTFVA-ANP 566 (595)
T ss_dssp EEEEEEEEETTEESCSEEEEETTCEEEEEEEECCCSTTC--CEEEEETT----TTE----EEEECTTCEEEEEEEC-CSC
T ss_pred ccceeEEEecCcccCCEEEEECCCEEEEEEEeCCCCCCc--eeeEEecC----CCc----ceeeCCCCeEEEEEEC-CCC
Confidence 567889999999999999999999999999998653111 46665542 232 2568999999999999 699
Q ss_pred ccC
Q 043378 130 GKL 132 (162)
Q Consensus 130 Gt~ 132 (162)
|+|
T Consensus 567 GtY 569 (595)
T 1fwx_A 567 GVY 569 (595)
T ss_dssp EEE
T ss_pred EEE
Confidence 999
No 44
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=98.47 E-value=1.7e-07 Score=70.48 Aligned_cols=72 Identities=14% Similarity=0.160 Sum_probs=48.1
Q ss_pred EEECCCCCCceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCC---cccc----CCccCCCC--eEEEEEEeC
Q 043378 56 VSVNGKFPGPRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGP---AYIT----QCPIQTGQ--GCVYNFTIV 126 (162)
Q Consensus 56 ~~~Ng~~PGP~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~---~~vt----q~~I~PG~--~~tY~f~~~ 126 (162)
+..+|. ++|+|++++||+|+++++|..+ ...|++.+......+.+.. ..+. ...|.||+ +.+|.|++
T Consensus 53 ~~~~g~-~~p~i~V~~GD~V~~~~tN~~~--~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~t~tft~- 128 (154)
T 2cal_A 53 FEVHDK-KNPTLEIPAGATVDVTFINTNK--GFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYTDFTWHP- 128 (154)
T ss_dssp EEETTE-ESCEEEECTTCEEEEEEEECCT--TCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEEEEEECC-
T ss_pred ccccCC-CCCEEEEeCCCEEEEEEEcCCC--CeeeEEEEeecCcchhccccccccccccccccccCCCCceEEEEEEEE-
Confidence 334444 6799999999999999999743 3356666665443322200 0000 12688999 89999986
Q ss_pred CCcccC
Q 043378 127 GQRGKL 132 (162)
Q Consensus 127 ~~~Gt~ 132 (162)
++|+|
T Consensus 129 -~pGtY 133 (154)
T 2cal_A 129 -TAGTY 133 (154)
T ss_dssp -CSEEE
T ss_pred -CCceE
Confidence 89999
No 45
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=98.37 E-value=1.1e-06 Score=61.39 Aligned_cols=66 Identities=15% Similarity=0.213 Sum_probs=49.5
Q ss_pred CCCCCCceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCccccCCccCCCCeEEEEEEeCCCcccCCCCC
Q 043378 59 NGKFPGPRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPAYITQCPIQTGQGCVYNFTIVGQRGKLSPNP 136 (162)
Q Consensus 59 Ng~~PGP~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~~vtq~~I~PG~~~tY~f~~~~~~Gt~~~~p 136 (162)
+..|..+.|++++||+|++ +|..+.+|++|+++. .||........+.||++++|.| +++|+|...+
T Consensus 27 ~~~F~P~~i~v~~Gd~V~~--~N~d~~~H~v~~~~~-------~~g~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C 92 (105)
T 2ov0_A 27 KMKYETPELHVKVGDTVTW--INREAMPHNVHFVAG-------VLGEAALKGPMMKKEQAYSLTF---TEAGTYDYHC 92 (105)
T ss_dssp TTEESSSEEEECTTCEEEE--EECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEEC
T ss_pred ecEEcCCEEEECCCCEEEE--EECCCCCEEEEEcCC-------CCCcccccccccCCCCEEEEEe---CCCEEEEEEe
Confidence 3445568999999999655 699888999999852 3555444455689999999888 4899984443
No 46
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=98.37 E-value=6.3e-07 Score=80.62 Aligned_cols=77 Identities=16% Similarity=0.244 Sum_probs=63.6
Q ss_pred eEEEEECCCC-CCceEEEecCCEEEEEEEecCC--CCeeEEeeccccCCCCCCCCCccccCCccCCCCeEEEEEEeCCCc
Q 043378 53 KSIVSVNGKF-PGPRIVAREGDQLLIKVVKHVQ--NNISIHWHGIGQLRSGWADGPAYITQCPIQTGQGCVYNFTIVGQR 129 (162)
Q Consensus 53 ~~~~~~Ng~~-PGP~I~v~~Gd~v~v~v~N~l~--~~~siH~HGl~~~~~~~~DG~~~vtq~~I~PG~~~tY~f~~~~~~ 129 (162)
...+++||+. +.|.|++++|+++++++.|... ..+.+|+||....... .||. ......|.||+++++.|++ +++
T Consensus 226 ~~~~~iNG~~~~~p~l~v~~G~~vrlrliN~~~~~~~h~~hlhG~~f~vi~-~d~~-~~d~v~l~pg~r~~v~~~~-~~p 302 (647)
T 1sdd_B 226 HEFHAINGMIYNLPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENG-TQQH-QLGVWPLLPGSFKTLEMKA-SKP 302 (647)
T ss_dssp CEEEEETTBSSCCCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEECS-SSCE-EESSEEECTTEEEEEEEEC-CSS
T ss_pred CceeccCCEecCCCCeEEcCCCEEEEEEEeCCCCCcceeEEEcCcEEEEec-CCCc-ccceEEECCCeEEEEEEEe-ccc
Confidence 4678999987 6799999999999999999985 4799999999875442 4654 3445678999999999999 578
Q ss_pred ccC
Q 043378 130 GKL 132 (162)
Q Consensus 130 Gt~ 132 (162)
|+|
T Consensus 303 G~w 305 (647)
T 1sdd_B 303 GWW 305 (647)
T ss_dssp EEE
T ss_pred eEe
Confidence 988
No 47
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=98.33 E-value=8e-07 Score=72.60 Aligned_cols=95 Identities=16% Similarity=0.104 Sum_probs=69.5
Q ss_pred eEEEEEEEEEEEEecCCeeeEEEEECCCCCC---ceEEEecCCEEEEEEEecCCC--CeeEEeeccccCCCCCCCCCcc-
Q 043378 34 TRHCKFDIKLQNATRLCHTKSIVSVNGKFPG---PRIVAREGDQLLIKVVKHVQN--NISIHWHGIGQLRSGWADGPAY- 107 (162)
Q Consensus 34 ~~~~~l~i~~~~~~~~g~~~~~~~~Ng~~PG---P~I~v~~Gd~v~v~v~N~l~~--~~siH~HGl~~~~~~~~DG~~~- 107 (162)
.++|.|.+..-..+ +|..-..|++||+.-+ +.|.++.||++++++.|.... .+++|+||...... .+|...
T Consensus 162 d~e~~l~~~d~~~~-~g~~~~~~~iNG~~~~~~~~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~--~~g~~~~ 238 (288)
T 3gdc_A 162 DDEMVMVMNGYNTD-GGDDNEFYSVNGLPFHFMDFPVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYY--PTGTMLT 238 (288)
T ss_dssp SEEEEEEEEEECCS-STTCCSEEEETTSTTHHHHSCEEEETTCCEEEEEEECCCSSSEEEEEETTCCEEEE--ETTCCSS
T ss_pred cceEEEEEeeEecC-CCCCcceEEECcccccccCcccccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEE--cCCCccC
Confidence 37777776654333 4555568999998543 479999999999999999854 49999999976432 343211
Q ss_pred ----ccCCccCCCCeEEEEEEeCCCcccC
Q 043378 108 ----ITQCPIQTGQGCVYNFTIVGQRGKL 132 (162)
Q Consensus 108 ----vtq~~I~PG~~~tY~f~~~~~~Gt~ 132 (162)
.....|.||++.+..|++ +++|+|
T Consensus 239 ~~~~~Dtv~v~pg~~~~v~~~~-~~pG~~ 266 (288)
T 3gdc_A 239 PSEYTDTISQVQGQRGILELRF-PYPGKF 266 (288)
T ss_dssp CSEEESEEEEETTCEEEEEECC-CSCEEE
T ss_pred CCceeeEEEeCCCceEEEEEEC-CCCEEE
Confidence 112347899999999998 689987
No 48
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=98.30 E-value=5.9e-08 Score=80.00 Aligned_cols=74 Identities=20% Similarity=0.318 Sum_probs=49.0
Q ss_pred eEEEEECCCCCC--ceEEEecCCEEEEEEEecCCC--CeeEEeeccccCCCCCCCCCccccCCccCCCCeEEEEEEeCCC
Q 043378 53 KSIVSVNGKFPG--PRIVAREGDQLLIKVVKHVQN--NISIHWHGIGQLRSGWADGPAYITQCPIQTGQGCVYNFTIVGQ 128 (162)
Q Consensus 53 ~~~~~~Ng~~PG--P~I~v~~Gd~v~v~v~N~l~~--~~siH~HGl~~~~~~~~DG~~~vtq~~I~PG~~~tY~f~~~~~ 128 (162)
-..+++||+..+ |.|++++|+++++++.|.... .+++|+||.... .||.. .....|.||+++++.|++ ++
T Consensus 201 ~~~~~ING~~~~~~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~----~dG~~-~dtv~l~pger~~v~~~~-~~ 274 (306)
T 1sdd_A 201 SLMYTVNGYVNGTMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLE----QNHHK-ISAITLVSATSTTANMTV-SP 274 (306)
T ss_dssp CEEECSSSCCSSCCCCCCCCCC------BBCCCSSSCEECCBCSSTTCE----ETTEE-CSCCCEETTCCBC--------
T ss_pred CcceeeCCEecCCCcceEEcCCCEEEEEEEeCCCCCccEEEEECCcEee----eCCEE-cceEEECCCcEEEEEEEc-CC
Confidence 457899999865 899999999999999999864 688999997653 57753 455678999999999999 68
Q ss_pred cccC
Q 043378 129 RGKL 132 (162)
Q Consensus 129 ~Gt~ 132 (162)
+|+|
T Consensus 275 pG~~ 278 (306)
T 1sdd_A 275 EGRW 278 (306)
T ss_dssp -CCC
T ss_pred CeEE
Confidence 9988
No 49
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=98.21 E-value=1.8e-06 Score=71.67 Aligned_cols=97 Identities=16% Similarity=0.146 Sum_probs=72.0
Q ss_pred eEEEEEEEEEEEEecC------C---eeeEEEEECCCC-CC-ceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCC
Q 043378 34 TRHCKFDIKLQNATRL------C---HTKSIVSVNGKF-PG-PRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWA 102 (162)
Q Consensus 34 ~~~~~l~i~~~~~~~~------g---~~~~~~~~Ng~~-PG-P~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~ 102 (162)
.+++.|.+++-..... + .....|++||+. |. +.+++++|+++++++.|.....+.+|+||....... .
T Consensus 136 d~e~~l~l~dw~~~~~~~~~~~~~~~~~~d~~~ING~~~~~~~~l~v~~G~~vrlrliN~~~~~h~~hlhGh~f~vi~-~ 214 (318)
T 3g5w_A 136 TKDYILMLSDWVSSWANKPGEGGIPGDVFDYYTINAKSFPETQPIRVKKGDVIRLRLIGAGDHVHAIHTHGHISQIAF-K 214 (318)
T ss_dssp CEEEEEEEEEECGGGTTCTTCCCCTTCCCCEEEETTBCBTSSCCEEECTTCEEEEEEEECSSSCEEEEETTSCEEEEE-E
T ss_pred cceeEEEEEeeccccccccccCCCCCCcCcEEEEcCcCCCCCccEEeCCCCEEEEEEEeCCCceEEEEECCcEEEEEe-c
Confidence 5677777765432211 1 123579999974 33 469999999999999999988999999999875442 6
Q ss_pred CCCcc-----ccCCccCCCCeEEEEEEeCCCcccC
Q 043378 103 DGPAY-----ITQCPIQTGQGCVYNFTIVGQRGKL 132 (162)
Q Consensus 103 DG~~~-----vtq~~I~PG~~~tY~f~~~~~~Gt~ 132 (162)
||.+. .....|.||++++..|++ +++|.|
T Consensus 215 dG~~~~~p~~~dtv~l~pger~~v~~~a-~~pG~w 248 (318)
T 3g5w_A 215 DGFPLDKPIKGDTVLIGPGERYDVILNM-DNPGLW 248 (318)
T ss_dssp TTEEEEEEEEESEEEECTTCEEEEEEEC-CSCSEE
T ss_pred CCcccCCCccccEEEECCCCEEEEEEEC-CCCeeE
Confidence 88642 122457999999999999 689988
No 50
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=98.11 E-value=4.3e-06 Score=69.73 Aligned_cols=78 Identities=19% Similarity=0.224 Sum_probs=62.0
Q ss_pred eEEEEECCCCCC--ceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCcc-----ccCCccCCCCeEEEEEEe
Q 043378 53 KSIVSVNGKFPG--PRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPAY-----ITQCPIQTGQGCVYNFTI 125 (162)
Q Consensus 53 ~~~~~~Ng~~PG--P~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~~-----vtq~~I~PG~~~tY~f~~ 125 (162)
...|++||+... +.|.+++|+++++++.|.....+.+|+||....... .||.+. .....|.||++++..|++
T Consensus 165 ~~~~~ING~~~~~~~~~~v~~G~~vrlrliN~~~~~h~~hlhGh~f~vi~-~DG~~~~~p~~~dtv~l~pg~r~~v~~~~ 243 (339)
T 2zwn_A 165 ADYFSVNAKSFPLTQPLRVKKGDVVKIRFFGAGGGIHAMHSHGHDMLVTH-KDGLPLDSPYYADTVLVSPGERYDVIIEA 243 (339)
T ss_dssp CCEEEETTBCTTSSCCEEECTTCEEEEEEEECSSSCEEEEETTCCEEEEE-ETTEEEEEEEEESEEEECTTCEEEEEEEC
T ss_pred cceEEEccccCCCcccEEECCCCEEEEEEEeCCCceEEEEECCcEEEEEE-eCCeecCCCcEEEEEEECCCCEEEEEEEe
Confidence 467999997532 459999999999999999988999999998775432 688632 123457899999999999
Q ss_pred CCCcccC
Q 043378 126 VGQRGKL 132 (162)
Q Consensus 126 ~~~~Gt~ 132 (162)
+++|.|
T Consensus 244 -~~pG~w 249 (339)
T 2zwn_A 244 -DNPGRF 249 (339)
T ss_dssp -CSCSEE
T ss_pred -CCCeeE
Confidence 578988
No 51
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=98.09 E-value=1.8e-05 Score=65.07 Aligned_cols=76 Identities=17% Similarity=0.179 Sum_probs=55.6
Q ss_pred EEECCCCC--CceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCcc-------ccCCccCCCCeEEEEEEeC
Q 043378 56 VSVNGKFP--GPRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPAY-------ITQCPIQTGQGCVYNFTIV 126 (162)
Q Consensus 56 ~~~Ng~~P--GP~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~~-------vtq~~I~PG~~~tY~f~~~ 126 (162)
|.+||..- -|.+.++.||+|++++.|.....+++|+||....... .|+... ..-..|.||+++++.+...
T Consensus 179 ~~~Ng~~~~~~p~l~v~~Ge~Vr~~liN~~~~~HpfHlHGh~F~v~~-~g~~~~~~~~~~~~Dtv~v~PGe~~~~~via~ 257 (299)
T 3t9w_A 179 MMINNRAHHDAPTFEANLGERVEWIAIGHGSNFHTFHLHGHRWLDNR-TGMRTSEYDPSPLIDIKDLNPGVSFGFQVIAG 257 (299)
T ss_dssp TEETTCCTTCCCEEEEETTCEEEEEEEEESSCCCEEEETTCCEESSS-SSSCCSTTCCCCEESEEECCTTCEEEEEEETT
T ss_pred eeecCccccccccceecCCCEEEEEEEeccccceeeeEecceEEEEe-cccccCCcCCCCceeeEEeCCceeEEEEEEEe
Confidence 46677643 3899999999999999999999999999998764321 222211 1123488999999988762
Q ss_pred --CCcccC
Q 043378 127 --GQRGKL 132 (162)
Q Consensus 127 --~~~Gt~ 132 (162)
+.||+|
T Consensus 258 ~~dnPG~w 265 (299)
T 3t9w_A 258 EGVGPGMW 265 (299)
T ss_dssp TTTCSEEE
T ss_pred eCCCCeeE
Confidence 358988
No 52
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=98.06 E-value=4.3e-06 Score=73.23 Aligned_cols=76 Identities=12% Similarity=0.098 Sum_probs=59.5
Q ss_pred EEEECCCCCC---ceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCC--CCCc------cc-cCCccCCCCeEEEE
Q 043378 55 IVSVNGKFPG---PRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWA--DGPA------YI-TQCPIQTGQGCVYN 122 (162)
Q Consensus 55 ~~~~Ng~~PG---P~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~--DG~~------~v-tq~~I~PG~~~tY~ 122 (162)
.|++||+..+ |.+++++|+++++++.|.....|.+|+||....... . +|.+ +. .-..+.||++.+..
T Consensus 372 ~~~iNG~~~~~~~~~~~~~~G~~v~w~l~N~~~~~Hp~HlHG~~F~vl~-~~~~g~~~~~~~~~~kDTv~v~Pg~~~~i~ 450 (481)
T 3zx1_A 372 MFLINRKSYDLKRIDLSSKLGVVEDWIVINKSHMDHPFHIHGTQFELIS-SKLNGKVQKAEFRALRDTINVRPNEELRLR 450 (481)
T ss_dssp TEEETTBCCCTTCCCEEEETTCCEEEEEEECSSSCEEEEETTCCEEEEE-EEETTEEEECSSCCEESEEEECTTCEEEEE
T ss_pred eeEECCEeCCCCCceEEeCCCCEEEEEEEcCCCCceeEEEeccEEEEEE-ecccCCCCCcccCcccceEEECCCCEEEEE
Confidence 4999998776 679999999999999999999999999999764321 1 3321 00 01347899999999
Q ss_pred EEeCCCcccC
Q 043378 123 FTIVGQRGKL 132 (162)
Q Consensus 123 f~~~~~~Gt~ 132 (162)
|++ +.+|.|
T Consensus 451 ~~~-d~pG~w 459 (481)
T 3zx1_A 451 MKQ-DFKGLR 459 (481)
T ss_dssp ECC-CSCEEE
T ss_pred EEc-CCCeeE
Confidence 999 689977
No 53
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=98.03 E-value=7.3e-06 Score=67.99 Aligned_cols=77 Identities=17% Similarity=0.237 Sum_probs=61.3
Q ss_pred EEEEECCCCCC----ceEEEecCCEEEEEEEecC-CCCeeEEeeccccCCCCCCCCCcc----ccCCccCCCCeEEEEEE
Q 043378 54 SIVSVNGKFPG----PRIVAREGDQLLIKVVKHV-QNNISIHWHGIGQLRSGWADGPAY----ITQCPIQTGQGCVYNFT 124 (162)
Q Consensus 54 ~~~~~Ng~~PG----P~I~v~~Gd~v~v~v~N~l-~~~~siH~HGl~~~~~~~~DG~~~----vtq~~I~PG~~~tY~f~ 124 (162)
..+.+||+... +.|.+++|+++++++.|.. ...+.+|+||...... +.||.+. +....|.||++++..|+
T Consensus 199 ~~~~iNG~~~~~~~~~~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~vi-~~DG~~~~p~~~d~l~l~pGer~dv~v~ 277 (327)
T 1kbv_A 199 EYVVFNGHVGALTGDNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKV-YVEGGKLINENVQSTIVPAGGSAIVEFK 277 (327)
T ss_dssp SEEEETTSTTTTSGGGCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSEE-EGGGSSCEECSBSEEEECTTEEEEEEEE
T ss_pred ceEEEcCcccCCCCceeEEeCCCCEEEEEEECCCCCCceeEEEeCCEEEEE-EcCCCcCCCCceeEEEECCCCEEEEEEE
Confidence 57899998543 6899999999999999987 4689999999876543 2687531 22345899999999999
Q ss_pred eCCCcccC
Q 043378 125 IVGQRGKL 132 (162)
Q Consensus 125 ~~~~~Gt~ 132 (162)
+ +++|+|
T Consensus 278 ~-~~pG~y 284 (327)
T 1kbv_A 278 V-DIPGNY 284 (327)
T ss_dssp E-CSCEEE
T ss_pred e-CCCeEE
Confidence 9 578988
No 54
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=97.99 E-value=2e-05 Score=65.01 Aligned_cols=76 Identities=16% Similarity=0.171 Sum_probs=57.1
Q ss_pred EEECCCC--CCceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCcc-------ccCCccCCCCeEEEEEEeC
Q 043378 56 VSVNGKF--PGPRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPAY-------ITQCPIQTGQGCVYNFTIV 126 (162)
Q Consensus 56 ~~~Ng~~--PGP~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~~-------vtq~~I~PG~~~tY~f~~~ 126 (162)
|.+||.. ..|.+.++.||+|++++.|..+..+++|+||...... +.||... .....|.||+++++.+...
T Consensus 163 ~t~Ng~~~~~~~~l~v~~Ge~vr~~liN~g~~~hpfHlHGh~F~v~-~~~~~~~~~~~~~~~Dtv~l~Pger~~v~v~a~ 241 (313)
T 3tas_A 163 MTINNRPAHTGPDFEATVGDRVEFVMITHGEYYHTFHLHGHRWADN-RTGMLTGPDDPSQVIDNKICGPADSFGFQVIAG 241 (313)
T ss_dssp TEETTCCTTCCCCEEEETTCEEEEEEEEESSCCEEEEETTCCEESS-TTSSCCSTTCCCCEESEEEECTTCEEEEEEETT
T ss_pred hhcccCCcccccccccccCCEEEEEEecccccceeeeecCCeeEEE-EECCccCCCCCCeeeeEEEeCCCcceEEEEEec
Confidence 4667753 3589999999999999999999999999999876433 2444321 1123478999999998763
Q ss_pred --CCcccC
Q 043378 127 --GQRGKL 132 (162)
Q Consensus 127 --~~~Gt~ 132 (162)
+.+|+|
T Consensus 242 ~~~nPG~w 249 (313)
T 3tas_A 242 EGVGAGAW 249 (313)
T ss_dssp TTTCSEEE
T ss_pred cCCCCEeE
Confidence 358998
No 55
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=97.95 E-value=2.8e-05 Score=56.66 Aligned_cols=74 Identities=9% Similarity=0.055 Sum_probs=50.5
Q ss_pred CCCceEEEecCCEEEEEEEecCCC-CeeEEeeccccC--------------CCCC-CCCCcc--ccCCccCCCCeEEEEE
Q 043378 62 FPGPRIVAREGDQLLIKVVKHVQN-NISIHWHGIGQL--------------RSGW-ADGPAY--ITQCPIQTGQGCVYNF 123 (162)
Q Consensus 62 ~PGP~I~v~~Gd~v~v~v~N~l~~-~~siH~HGl~~~--------------~~~~-~DG~~~--vtq~~I~PG~~~tY~f 123 (162)
|--+.|++++||+|+++++|.... +|++|.|+.... ...+ .++.+. .....|.||+++++.|
T Consensus 32 F~p~~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGet~~v~f 111 (139)
T 2aan_A 32 FDKTELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEVTF 111 (139)
T ss_dssp BSCSEEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTCEEEEEE
T ss_pred EcCCeEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCCEEEEEE
Confidence 334689999999999999999887 899999874310 0000 011010 1123479999999999
Q ss_pred EeCCCcccCCCCC
Q 043378 124 TIVGQRGKLSPNP 136 (162)
Q Consensus 124 ~~~~~~Gt~~~~p 136 (162)
++ +++|+|..+.
T Consensus 112 ~~-~~pG~y~f~C 123 (139)
T 2aan_A 112 TA-PAAGTYLYIC 123 (139)
T ss_dssp EC-CSSEEEEEEC
T ss_pred EC-CCCeEEEEEc
Confidence 98 5899994333
No 56
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=97.84 E-value=2.7e-05 Score=66.71 Aligned_cols=77 Identities=17% Similarity=0.239 Sum_probs=60.7
Q ss_pred EEEEECCCCCC----ceEEEecCCEEEEEEEecC-CCCeeEEeeccccCCCCCCCCCcc----ccCCccCCCCeEEEEEE
Q 043378 54 SIVSVNGKFPG----PRIVAREGDQLLIKVVKHV-QNNISIHWHGIGQLRSGWADGPAY----ITQCPIQTGQGCVYNFT 124 (162)
Q Consensus 54 ~~~~~Ng~~PG----P~I~v~~Gd~v~v~v~N~l-~~~~siH~HGl~~~~~~~~DG~~~----vtq~~I~PG~~~tY~f~ 124 (162)
..+++||+... |.|.++.|+++++++.|.. ...+++|+||...... +.||.+. +....|.||++++..++
T Consensus 189 ~~~liNG~~~~~~~~~~l~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~vi-~~DG~~~~p~~~~~~~l~pg~r~~v~v~ 267 (442)
T 2zoo_A 189 DYVVFNGSVGSTTDENSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTV-YVEGGSLKNHNVQTTLIPAGGAAIVEFK 267 (442)
T ss_dssp SEEEETTSTTTTSGGGCEEEETTCEEEEEEEEEESSCCEEEEEETCCBSEE-EGGGSSCEECSBSEEEECTTEEEEEEEE
T ss_pred CEEEECCCcCCCCCCCceEeCCCCEEEEEEEeCCCCCceeeEEcCCEEEEE-ecCCccCCCccceEEEECCCeeEEEEEE
Confidence 56889998643 6899999999999999986 4679999999877543 2788642 12234789999999999
Q ss_pred eCCCcccC
Q 043378 125 IVGQRGKL 132 (162)
Q Consensus 125 ~~~~~Gt~ 132 (162)
+ +++|+|
T Consensus 268 ~-~~~G~y 274 (442)
T 2zoo_A 268 V-EVPGTF 274 (442)
T ss_dssp C-CSCEEE
T ss_pred c-CCCCeE
Confidence 8 578887
No 57
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=97.83 E-value=2.9e-05 Score=53.55 Aligned_cols=67 Identities=10% Similarity=0.109 Sum_probs=47.0
Q ss_pred ceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCc----cccCCccCCCCeEEEEEEeCCCcccCCCCC
Q 043378 65 PRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPA----YITQCPIQTGQGCVYNFTIVGQRGKLSPNP 136 (162)
Q Consensus 65 P~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~----~vtq~~I~PG~~~tY~f~~~~~~Gt~~~~p 136 (162)
+.|++++||+|++ +|....+|++|.|+...+. .+|.. ......+.||++++|.|+++.++|+|..+.
T Consensus 20 ~~i~v~~Gd~V~~--~n~~~~~H~~~~~~~~~~~---~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~y~C 90 (106)
T 2gim_A 20 AKLTIKPGDTVEF--LNNKVPPHNVVFDAALNPA---KSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYC 90 (106)
T ss_dssp SEEEECTTCEEEE--EECSSSCCCBEECSSSSTT---CCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEEEEC
T ss_pred CEEEECCCCEEEE--EECCCCCceEEEeCCCCcc---cccccchhccccceeeCCCCEEEEEEecCCCCceEEEEe
Confidence 6899999998755 5888788999998765432 12210 012245789999999997645899984433
No 58
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=97.75 E-value=5.2e-05 Score=52.17 Aligned_cols=58 Identities=7% Similarity=0.015 Sum_probs=46.6
Q ss_pred ceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCccccCCccCCCCeEEEEEEeCCCcccCCCCC
Q 043378 65 PRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPAYITQCPIQTGQGCVYNFTIVGQRGKLSPNP 136 (162)
Q Consensus 65 P~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~~vtq~~I~PG~~~tY~f~~~~~~Gt~~~~p 136 (162)
..|+++.||+|++.++|....+|++...+.... ..+.||++.++.|+. +++|+|..+.
T Consensus 28 ~~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~~~-------------~~~~pg~~~~~~~t~-~~~G~Y~y~C 85 (100)
T 4hci_A 28 NVITIPINESTTLLLKNKGKSEHTFTIKKLGID-------------VVVESGKEKNITVKP-KSAGTYELIC 85 (100)
T ss_dssp SEEEECTTSCEEEEEEECSSSCEEEEEGGGTEE-------------EEECTTCEEEEEECC-CSCEEEEEEC
T ss_pred CEEEECCCCEEEEEEEcCCCceEEEEEecCCcc-------------eeecCCcceeEEEec-ccCceEEEEC
Confidence 489999999999999999888888777654321 246899999999998 6899994443
No 59
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.75 E-value=4.6e-05 Score=55.48 Aligned_cols=64 Identities=13% Similarity=0.134 Sum_probs=43.7
Q ss_pred CCCCceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCccccCCccCCCCeEEEEEEeCCCcccCCCCC
Q 043378 61 KFPGPRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPAYITQCPIQTGQGCVYNFTIVGQRGKLSPNP 136 (162)
Q Consensus 61 ~~PGP~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~~vtq~~I~PG~~~tY~f~~~~~~Gt~~~~p 136 (162)
.|--+.|++++||+|++ .|....+|++++.... +|........+.||++++|.| +++|+|..+.
T Consensus 56 ~F~P~~i~V~~GdtV~~--~N~d~~~H~v~~~~~~-------~g~~~~~s~~l~pG~t~~~tF---~~~G~y~y~C 119 (132)
T 3c75_A 56 KYLTPEVTIKAGETVYW--VNGEVMPHNVAFKKGI-------VGEDAFRGEMMTKDQAYAITF---NEAGSYDYFC 119 (132)
T ss_dssp EESSSEEEECTTCEEEE--EECSSSCBCCEECTTT-------SSSSCEECCCBCTTEEEEEEE---CSCEEEEEEC
T ss_pred EEeCCEEEECCCCEEEE--EECCCCceEEEEeCCC-------CCcccccccccCCCCEEEEEc---CCCEEEEEEe
Confidence 33336999999999765 5988888888875421 222122234578999999888 4789985443
No 60
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=97.72 E-value=4.4e-05 Score=68.71 Aligned_cols=80 Identities=14% Similarity=0.032 Sum_probs=59.4
Q ss_pred eEEEEECCCC--CCceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCC-----------CCCC------------c-
Q 043378 53 KSIVSVNGKF--PGPRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGW-----------ADGP------------A- 106 (162)
Q Consensus 53 ~~~~~~Ng~~--PGP~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~-----------~DG~------------~- 106 (162)
...|++||.. ..+.+++++|+++++++.|.....|.||+||........ .+|. +
T Consensus 458 ~~~~~iNG~~~~~~~~~~v~~G~~v~w~l~N~~~~~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~ 537 (612)
T 2g23_A 458 TKTYRRTAATFNDGLGFTIGEGTHEQWTFLNLSPILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPL 537 (612)
T ss_dssp EEEEEEEECSTTSCCCEEEETTCEEEEEEEECSSSCEEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCC
T ss_pred eeEEEECCccCCCCCceEecCCCEEEEEEEeCCCCCCCeEEcCceEEEecccCcccccccccccCcccccccccccccCC
Confidence 4678999973 458999999999999999999999999999998743110 0110 0
Q ss_pred -----c-ccCCccCCCCeEEEEEEeCCCcccC
Q 043378 107 -----Y-ITQCPIQTGQGCVYNFTIVGQRGKL 132 (162)
Q Consensus 107 -----~-vtq~~I~PG~~~tY~f~~~~~~Gt~ 132 (162)
+ ..-..|.||++.+.+|++...+|.|
T Consensus 538 ~~~e~~~kDTv~v~Pg~~~~i~~~~~~~pG~w 569 (612)
T 2g23_A 538 APNELGHKDVFQVPGPQGLRVMGKFDGAYGRF 569 (612)
T ss_dssp CTTSSSCBSEEEECSSEEEEEEEECCSCCEEE
T ss_pred CcccccccCeEEECCCcEEEEEEEeCCCCccE
Confidence 0 0012378999999999994489988
No 61
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=97.70 E-value=0.00015 Score=62.71 Aligned_cols=95 Identities=11% Similarity=0.140 Sum_probs=71.1
Q ss_pred eEEEEEEEEEEEEecCC-----------eeeEEEEECCCCCCceEEEecCCEEEEEEEecCCC-CeeEEe-eccccCCCC
Q 043378 34 TRHCKFDIKLQNATRLC-----------HTKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQN-NISIHW-HGIGQLRSG 100 (162)
Q Consensus 34 ~~~~~l~i~~~~~~~~g-----------~~~~~~~~Ng~~PGP~I~v~~Gd~v~v~v~N~l~~-~~siH~-HGl~~~~~~ 100 (162)
.+++.|.+++-....++ ..-..+++||+ +.|.|.+++| ++++++.|.... ...+|+ ||.......
T Consensus 152 ~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~d~~liNG~-~~p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~ 229 (451)
T 2uxt_A 152 VDDFPVIIQDKRLDNFGTPEYNEPGSGGFVGDTLLVNGV-QSPYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVIS 229 (451)
T ss_dssp TTEEEEEEEEEEECTTSCEECCCCSSSCCCCSEEEETTE-ESCEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEE
T ss_pred CceEEEEEEeeecCCCCceecccccCCCCcCCEEEECCc-ccceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEE
Confidence 45777777766544333 22357899998 4689999999 999999999854 678999 887664432
Q ss_pred CCCCCcc-----ccCCccCCCCeEEEEEEeCCCcccC
Q 043378 101 WADGPAY-----ITQCPIQTGQGCVYNFTIVGQRGKL 132 (162)
Q Consensus 101 ~~DG~~~-----vtq~~I~PG~~~tY~f~~~~~~Gt~ 132 (162)
.||.+. +....|.||+++++.++++ +.|+|
T Consensus 230 -~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~-~~~~~ 264 (451)
T 2uxt_A 230 -GDQGFLPAPVSVKQLSLAPGERREILVDMS-NGDEV 264 (451)
T ss_dssp -CSSSEEEEEEEESSEEECTTCEEEEEEECT-TCCCE
T ss_pred -eCCCccCCceEeceEEECceeEEEEEEEeC-CCCEE
Confidence 899642 3456789999999999984 56766
No 62
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=97.67 E-value=1.5e-05 Score=73.51 Aligned_cols=76 Identities=14% Similarity=0.121 Sum_probs=61.2
Q ss_pred EEEEECCCCCC--ceEEEecCCEEEEEEEecCC--CCeeEEeeccccCCCCCCCCCccccCCccCCCCeEEEEEEeCCCc
Q 043378 54 SIVSVNGKFPG--PRIVAREGDQLLIKVVKHVQ--NNISIHWHGIGQLRSGWADGPAYITQCPIQTGQGCVYNFTIVGQR 129 (162)
Q Consensus 54 ~~~~~Ng~~PG--P~I~v~~Gd~v~v~v~N~l~--~~~siH~HGl~~~~~~~~DG~~~vtq~~I~PG~~~tY~f~~~~~~ 129 (162)
.++++||+..+ |.+.++.|++++++|.|... ..+.+|+||..+.... .||. ......|.||++++..|.+ +++
T Consensus 355 ~~~~ING~~~~~~~~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~-~dg~-~~Dtv~l~Pg~~~~v~~~a-d~p 431 (770)
T 2r7e_B 355 RFHAINGYIMDTLPGLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRK-KEEY-KMALYNLYPGVFETVEMLP-SKA 431 (770)
T ss_dssp CEECTTSCTTTTCCCCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCS-SSCC-EESEEECCTTCCCEEEECC-SSC
T ss_pred CccccCCccCCCCCCeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEe-cCCc-eeeEEEECCCeEEEEEEEe-CCC
Confidence 46889998754 78999999999999999874 3799999999886542 5654 2223568999999999999 689
Q ss_pred ccC
Q 043378 130 GKL 132 (162)
Q Consensus 130 Gt~ 132 (162)
|.|
T Consensus 432 G~w 434 (770)
T 2r7e_B 432 GIW 434 (770)
T ss_dssp BCC
T ss_pred Cce
Confidence 987
No 63
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=97.48 E-value=0.00026 Score=60.74 Aligned_cols=76 Identities=11% Similarity=0.096 Sum_probs=57.2
Q ss_pred EEEECCCC---CCceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCc----ccc-CCccCCCCeEEEEEEeC
Q 043378 55 IVSVNGKF---PGPRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPA----YIT-QCPIQTGQGCVYNFTIV 126 (162)
Q Consensus 55 ~~~~Ng~~---PGP~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~----~vt-q~~I~PG~~~tY~f~~~ 126 (162)
.|.+||+. +-+.+.++.|+.+++.+.|....+|.+|.||.+..... .+|.+ ... -..|+||+..+.+|++
T Consensus 335 ~~~iNg~~~~~~~~~~~~~~g~~~~~~~~N~~~~~HP~HLHG~~F~Vl~-~~g~~~~~p~~rDTv~v~p~~~v~i~f~a- 412 (439)
T 2xu9_A 335 RFFINGQVFDHRRVDLKGQAQTVEVWEVENQGDMDHPFHLHVHPFQVLS-VGGRPFPYRAWKDVVNLKAGEVARLLVPL- 412 (439)
T ss_dssp EEEETTBCCCTTCCCEEECTTCEEEEEEEECSSSCEEEEESSCCBEEEE-ETTEECSSCCCBSEEEECTTCEEEEEEEC-
T ss_pred eEeECCEECCCCCCceecCCCCEEEEEEEcCCCCCCCceeCCCcEEEEe-eCCCCCCCCCCeEEEEeCCCCEEEEEEEc-
Confidence 68899964 23569999999999999999999999999999874322 22211 100 1347899999999997
Q ss_pred CCcccC
Q 043378 127 GQRGKL 132 (162)
Q Consensus 127 ~~~Gt~ 132 (162)
+.+|.|
T Consensus 413 dnpG~w 418 (439)
T 2xu9_A 413 REKGRT 418 (439)
T ss_dssp CSCEEE
T ss_pred CCCCCE
Confidence 789976
No 64
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=97.47 E-value=0.00024 Score=62.15 Aligned_cols=96 Identities=13% Similarity=0.083 Sum_probs=67.9
Q ss_pred EEEEEEEEEEEecCCe-----eeEEEEECCCCC--------CceEEEecCCEEEEEEEecCCC-CeeEEeeccccCCCCC
Q 043378 36 HCKFDIKLQNATRLCH-----TKSIVSVNGKFP--------GPRIVAREGDQLLIKVVKHVQN-NISIHWHGIGQLRSGW 101 (162)
Q Consensus 36 ~~~l~i~~~~~~~~g~-----~~~~~~~Ng~~P--------GP~I~v~~Gd~v~v~v~N~l~~-~~siH~HGl~~~~~~~ 101 (162)
++.|.+++-....++. .-..+.+||+.. .|.|++++|+++++|+.|.... ...+|++|.......
T Consensus 143 e~~l~l~Dw~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~- 221 (503)
T 1hfu_A 143 NTIITLADWYHIPAPSIQGAAQPDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIE- 221 (503)
T ss_dssp TSEEEEEEECSSCGGGCC---CCSEEEETTBCCBTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-
T ss_pred eEEEEEcccccCChHHhcCCCCCCEEEECcccccCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEe-
Confidence 4556665543332221 134678999753 3899999999999999999854 578999888765432
Q ss_pred CCCCcc----ccCCccCCCCeEEEEEEeCCCcccC
Q 043378 102 ADGPAY----ITQCPIQTGQGCVYNFTIVGQRGKL 132 (162)
Q Consensus 102 ~DG~~~----vtq~~I~PG~~~tY~f~~~~~~Gt~ 132 (162)
.||.+. +....|.||++++..+++.+.+|.|
T Consensus 222 ~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y 256 (503)
T 1hfu_A 222 VDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNY 256 (503)
T ss_dssp ETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEE
T ss_pred ccCccccccccCeEEEcccceEEEEEEcCCCccce
Confidence 799752 2334589999999999985556766
No 65
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=97.46 E-value=0.00025 Score=62.33 Aligned_cols=78 Identities=15% Similarity=0.122 Sum_probs=61.0
Q ss_pred EEEEECCCCC---------CceEEEecCCEEEEEEEecCCC-CeeEEeeccccCCCCCCCCCcc----ccCCccCCCCeE
Q 043378 54 SIVSVNGKFP---------GPRIVAREGDQLLIKVVKHVQN-NISIHWHGIGQLRSGWADGPAY----ITQCPIQTGQGC 119 (162)
Q Consensus 54 ~~~~~Ng~~P---------GP~I~v~~Gd~v~v~v~N~l~~-~~siH~HGl~~~~~~~~DG~~~----vtq~~I~PG~~~ 119 (162)
..+.+||+.. -|.|.+++|+++++|+.|.... ...+|++|....... .||.+. +....|.||+++
T Consensus 192 d~~liNG~~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~p~~~~~l~l~pgqR~ 270 (521)
T 1v10_A 192 DTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIE-VDGVSHQPLTVDSLTIFAGQRY 270 (521)
T ss_dssp SEEEETTBCCCSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-ETTEEEEEEEESBEEECTTCEE
T ss_pred CEEEECCcccCCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEEe-cCCccccceeeeeEEEcccceE
Confidence 4688999743 2899999999999999999864 578999988765442 799752 234558999999
Q ss_pred EEEEEeCCCcccC
Q 043378 120 VYNFTIVGQRGKL 132 (162)
Q Consensus 120 tY~f~~~~~~Gt~ 132 (162)
+..+++++.+|.|
T Consensus 271 dvlv~~~~~~g~y 283 (521)
T 1v10_A 271 SVVVEANQAVGNY 283 (521)
T ss_dssp EEEEECCSCSSEE
T ss_pred EEEEEcCCCCCce
Confidence 9999986556776
No 66
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=97.45 E-value=0.00028 Score=58.25 Aligned_cols=74 Identities=20% Similarity=0.171 Sum_probs=53.8
Q ss_pred EEEEECCCC---C-CceEEEecCCEEEEEEEecCCC--CeeEEeeccccCCCCCCCCCcc------ccCCccCCCCeEEE
Q 043378 54 SIVSVNGKF---P-GPRIVAREGDQLLIKVVKHVQN--NISIHWHGIGQLRSGWADGPAY------ITQCPIQTGQGCVY 121 (162)
Q Consensus 54 ~~~~~Ng~~---P-GP~I~v~~Gd~v~v~v~N~l~~--~~siH~HGl~~~~~~~~DG~~~------vtq~~I~PG~~~tY 121 (162)
..+++||+. + .|.|.+++|++++++..|.... .+.+|.|++.+. .||.+. +....|.||++.+.
T Consensus 210 ~~~~ING~~~~~~~~~~l~v~~Ger~Rl~n~~~~~~~~~h~i~~h~~~Vi----~dG~~~~~p~~~~dtv~l~pGer~~v 285 (333)
T 1mzy_A 210 SHIVFNGAVGALTGEGALKAKVGDNVLFVHSQPNRDSRPHLIGGHGDLVW----ETGKFHNAPERDLETWFIRGGTAGAA 285 (333)
T ss_dssp SEEEETTSTTTTSGGGCEEEETTCEEEEEEEESSSCBCEEEETCCEEEEE----TTCCTTSCCEEEESBCCBCTTEEEEE
T ss_pred cEEEECCcccccCCCcceEecCCCEEEEEECCCCCccccEEECCCCeEEE----eCCcccCCCccCcceEEECCCceEEE
Confidence 468999985 2 3689999999999988776533 355666766653 466531 22345899999999
Q ss_pred EEEeCCCcccC
Q 043378 122 NFTIVGQRGKL 132 (162)
Q Consensus 122 ~f~~~~~~Gt~ 132 (162)
.+++ +++|.|
T Consensus 286 ~v~a-~~pG~y 295 (333)
T 1mzy_A 286 LYKF-LQPGVY 295 (333)
T ss_dssp EEEC-CSCEEE
T ss_pred EEEc-CCCEEE
Confidence 9999 578988
No 67
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=97.44 E-value=0.00025 Score=48.03 Aligned_cols=65 Identities=9% Similarity=0.060 Sum_probs=44.2
Q ss_pred ceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCC-ccccCCccCCCCeEEEEEEeCCCcccCCCCC
Q 043378 65 PRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGP-AYITQCPIQTGQGCVYNFTIVGQRGKLSPNP 136 (162)
Q Consensus 65 P~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~-~~vtq~~I~PG~~~tY~f~~~~~~Gt~~~~p 136 (162)
+.|++++||+|+ ++|....+|++|+|+...+.. .|.. .......+.||+++++.|. ++|+|..+.
T Consensus 18 ~~i~v~~G~~V~--~~n~~~~~H~~~~~~~~~p~~--~~~~~~~~~~~~~~pG~~~~~tf~---~~G~y~y~C 83 (98)
T 2plt_A 18 KTLTIKSGETVN--FVNNAGFPHNIVFDEDAIPSG--VNADAISRDDYLNAPGETYSVKLT---AAGEYGYYC 83 (98)
T ss_dssp SEEEECTTCEEE--EEECSSCCEEEEECGGGSCTT--CCHHHHCEEEEECSTTCEEEEECC---SCEEEEEEC
T ss_pred CEEEECCCCEEE--EEECCCCceEEEEeCCCCCCc--cccccccccceecCCCCEEEEEeC---CCeEEEEEc
Confidence 589999999875 589988899999998654321 1110 0001235789999998773 789984333
No 68
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=97.40 E-value=0.001 Score=48.16 Aligned_cols=69 Identities=10% Similarity=0.083 Sum_probs=46.6
Q ss_pred CceEEEecCCEEEEEEEe--cCCCCeeEEeeccc------------cCCC-CC---CCCCcc-ccCCccCCCCeEEEEEE
Q 043378 64 GPRIVAREGDQLLIKVVK--HVQNNISIHWHGIG------------QLRS-GW---ADGPAY-ITQCPIQTGQGCVYNFT 124 (162)
Q Consensus 64 GP~I~v~~Gd~v~v~v~N--~l~~~~siH~HGl~------------~~~~-~~---~DG~~~-vtq~~I~PG~~~tY~f~ 124 (162)
-+.|+++.||+|+++++| ....+|++|.+... .... .+ .|.... .....|.||++.++.|.
T Consensus 32 P~~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG~~~~~~~~ 111 (140)
T 1qhq_A 32 QTSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSVTFR 111 (140)
T ss_dssp CSEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEEEEEE
T ss_pred CCeEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCCceeEEEEE
Confidence 369999999999999999 77788888887321 0000 00 011000 01135789999999999
Q ss_pred eCCCcccCC
Q 043378 125 IVGQRGKLS 133 (162)
Q Consensus 125 ~~~~~Gt~~ 133 (162)
+ +++|+|.
T Consensus 112 ~-~~~G~y~ 119 (140)
T 1qhq_A 112 T-PAPGTYL 119 (140)
T ss_dssp C-CSSEEEE
T ss_pred e-CCCeeEE
Confidence 8 6899983
No 69
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=97.38 E-value=0.00048 Score=56.93 Aligned_cols=74 Identities=20% Similarity=0.189 Sum_probs=52.2
Q ss_pred EEEEECCCCC----CceEEEecCCEEEEEEEecCCCC--eeEEeeccccCCCCCCCCCcc------ccCCccCCCCeEEE
Q 043378 54 SIVSVNGKFP----GPRIVAREGDQLLIKVVKHVQNN--ISIHWHGIGQLRSGWADGPAY------ITQCPIQTGQGCVY 121 (162)
Q Consensus 54 ~~~~~Ng~~P----GP~I~v~~Gd~v~v~v~N~l~~~--~siH~HGl~~~~~~~~DG~~~------vtq~~I~PG~~~tY 121 (162)
..+++||+.- -|.+.+++|+++++...|..... +.+|.|+..+. .||.+. +....|.||++++.
T Consensus 216 ~~~~iNG~~~~~~~~~~l~v~~G~r~Rl~n~~~~~~~~~~~i~gh~~~Vi----~dG~~~~~p~~~~dtv~l~pGer~~v 291 (340)
T 2bw4_A 216 THIVFNGAVGALTGDHALTAAVGERVLVVHSQANRDTRPHLIGGHGDYVW----ATGKFRNPPDLDQETWLIPGGTAGAA 291 (340)
T ss_dssp SEEEETTSTTTTSGGGCEEEETTCEEEEEEEESSSCBCEEEETCCEEEEE----TTCCTTSCCEEEESCCCBCTTEEEEE
T ss_pred CEEEECCccCCccCCCceEcCCCCEEEEEECCCCCccceEEecCcceEEe----CCCcccCCccccceEEEeCCCceEEE
Confidence 4789999863 38999999999998877765443 33444544432 466431 22345889999999
Q ss_pred EEEeCCCcccC
Q 043378 122 NFTIVGQRGKL 132 (162)
Q Consensus 122 ~f~~~~~~Gt~ 132 (162)
.+++ +++|.|
T Consensus 292 ~v~~-~~pG~y 301 (340)
T 2bw4_A 292 FYTF-RQPGVY 301 (340)
T ss_dssp EEEC-CSCEEE
T ss_pred EEEC-CCCeee
Confidence 9999 568987
No 70
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=97.30 E-value=0.00051 Score=60.22 Aligned_cols=79 Identities=14% Similarity=0.085 Sum_probs=60.8
Q ss_pred eEEEEECCCC--------CCceEEEecCCEEEEEEEecCC-CCeeEEeeccccCCCCCCCCCcc----ccCCccCCCCeE
Q 043378 53 KSIVSVNGKF--------PGPRIVAREGDQLLIKVVKHVQ-NNISIHWHGIGQLRSGWADGPAY----ITQCPIQTGQGC 119 (162)
Q Consensus 53 ~~~~~~Ng~~--------PGP~I~v~~Gd~v~v~v~N~l~-~~~siH~HGl~~~~~~~~DG~~~----vtq~~I~PG~~~ 119 (162)
...+.+||+. +-|.|.+++|+++++|+.|... ....+|++|....... .||.+- +....|.||+++
T Consensus 166 ~d~~liNG~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via-~DG~~~~P~~~~~l~i~pGqR~ 244 (499)
T 3pxl_A 166 ADATLINGKGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIE-VDSVNSQPLEVDSIQIFAAQRY 244 (499)
T ss_dssp CSEEEETTBCCCTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEE-ETTEEEEEEEESBEEECTTCEE
T ss_pred CcEEEECCCCcCCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEE-ECCcccCceEeeeEEECCCcEE
Confidence 3578899963 3479999999999999999985 4578899998765443 798752 223458999999
Q ss_pred EEEEEeCCCcccC
Q 043378 120 VYNFTIVGQRGKL 132 (162)
Q Consensus 120 tY~f~~~~~~Gt~ 132 (162)
+..+++++.+|.|
T Consensus 245 dvlv~~~~~~g~y 257 (499)
T 3pxl_A 245 SFVLDANQAVDNY 257 (499)
T ss_dssp EEEEECCSCSSEE
T ss_pred EEEEECCCCCceE
Confidence 9999986555776
No 71
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=97.26 E-value=0.00055 Score=60.65 Aligned_cols=78 Identities=10% Similarity=0.075 Sum_probs=60.6
Q ss_pred EEEEECCCCC--------CceEEEecCCEEEEEEEecCCC-CeeEEeeccccCCCCCCCCCcc----ccCCccCCCCeEE
Q 043378 54 SIVSVNGKFP--------GPRIVAREGDQLLIKVVKHVQN-NISIHWHGIGQLRSGWADGPAY----ITQCPIQTGQGCV 120 (162)
Q Consensus 54 ~~~~~Ng~~P--------GP~I~v~~Gd~v~v~v~N~l~~-~~siH~HGl~~~~~~~~DG~~~----vtq~~I~PG~~~t 120 (162)
..+.+||+.. -|.|.+++|+++++++.|.... ...+|++|....... .||.+. +....|.||++++
T Consensus 196 d~~liNG~~~~~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~p~~~~~l~l~pgeR~d 274 (559)
T 2q9o_A 196 DNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIA-ADMVPVNAMTVDSLFLAVGQRYD 274 (559)
T ss_dssp SEEEETTBCBCTTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEE-ETTEEEEEEEESCEEECTTCEEE
T ss_pred ceeEECCccccCcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEe-cCCcccCceEeCeEEEccEEEEE
Confidence 4678999863 3799999999999999999855 578999998765432 798753 2345589999999
Q ss_pred EEEEeCCCcccC
Q 043378 121 YNFTIVGQRGKL 132 (162)
Q Consensus 121 Y~f~~~~~~Gt~ 132 (162)
..+++++.+|.|
T Consensus 275 vlv~~~~~~g~y 286 (559)
T 2q9o_A 275 VVIDASRAPDNY 286 (559)
T ss_dssp EEEECCSCSSEE
T ss_pred EEEECCCCCCcE
Confidence 999885546655
No 72
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=97.21 E-value=0.00071 Score=59.23 Aligned_cols=79 Identities=15% Similarity=0.155 Sum_probs=60.3
Q ss_pred eEEEEECCCC---------CCceEEEecCCEEEEEEEecCC-CCeeEEeeccccCCCCCCCCCcc----ccCCccCCCCe
Q 043378 53 KSIVSVNGKF---------PGPRIVAREGDQLLIKVVKHVQ-NNISIHWHGIGQLRSGWADGPAY----ITQCPIQTGQG 118 (162)
Q Consensus 53 ~~~~~~Ng~~---------PGP~I~v~~Gd~v~v~v~N~l~-~~~siH~HGl~~~~~~~~DG~~~----vtq~~I~PG~~ 118 (162)
...+.+||+. +-|.|++++|+++++|+.|... ....+|++|....... .||.+- +....|.||++
T Consensus 168 ~d~~liNG~g~~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via-~DG~~~~P~~~~~l~i~pGqR 246 (495)
T 3t6v_A 168 ADSTLIDGLGRTHVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIE-TDGVDSQELTVDEIQIFAAQR 246 (495)
T ss_dssp CSEEEETTBCCBSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-ETTEEEEEEEESBEEECTTCE
T ss_pred CcEEEECCcCcCCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEE-eCCcccCCEEeeeEEEcCceE
Confidence 3578999963 3479999999999999999875 4578888888765443 798752 22345899999
Q ss_pred EEEEEEeCCCcccC
Q 043378 119 CVYNFTIVGQRGKL 132 (162)
Q Consensus 119 ~tY~f~~~~~~Gt~ 132 (162)
++..+++++.+|.|
T Consensus 247 ~dvlv~~~~~~g~y 260 (495)
T 3t6v_A 247 YSFVLNANQPVGNY 260 (495)
T ss_dssp EEEEEECCSCSSEE
T ss_pred EEEEEECCCCCceE
Confidence 99999986555766
No 73
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=97.17 E-value=0.002 Score=56.82 Aligned_cols=67 Identities=10% Similarity=0.093 Sum_probs=49.6
Q ss_pred ceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCC-------CC---------------cccc-CCccCCCCeEEE
Q 043378 65 PRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWAD-------GP---------------AYIT-QCPIQTGQGCVY 121 (162)
Q Consensus 65 P~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~D-------G~---------------~~vt-q~~I~PG~~~tY 121 (162)
..+.++.|+.|++.+.|....+|.+|.||.+........ |. |... -..|+||+....
T Consensus 370 ~~~~~~~g~~v~ivi~N~~~~~HP~HLHGh~F~Vl~~~~~~~~~~~G~p~~~~~~~~~~~~~~p~~RDTv~V~pgg~v~I 449 (534)
T 1zpu_A 370 HTFILEKDEIVEIVLNNQDTGTHPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRDTLYVRPQSNFVI 449 (534)
T ss_dssp CEEEECTTCEEEEEEEECSSSCEEEEETTCCEEEEEECCCCCGGGTCCCCCCBTTBCCCCCSSCEEESEEEECTTCEEEE
T ss_pred eEEEeCCCCEEEEEEeCCCCCCCCeEecCCceEEEeecCCccccccCcccccCccccccccCCCCeeeEEEeCCCCEEEE
Confidence 468999999999999999999999999998863321111 20 0000 023789999999
Q ss_pred EEEeCCCcccC
Q 043378 122 NFTIVGQRGKL 132 (162)
Q Consensus 122 ~f~~~~~~Gt~ 132 (162)
+|++ +.+|.+
T Consensus 450 rF~a-DNPG~W 459 (534)
T 1zpu_A 450 RFKA-DNPGVW 459 (534)
T ss_dssp EEEC-CSCEEE
T ss_pred EEEe-CCCeeE
Confidence 9999 789987
No 74
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=97.15 E-value=0.00061 Score=59.71 Aligned_cols=69 Identities=14% Similarity=0.081 Sum_probs=51.0
Q ss_pred EEEECCCCC---CceEEEecCCEEEEEEEecC-CCCeeEEeeccccCCCCCCCCCccc------cC-CccCCCCeEEEEE
Q 043378 55 IVSVNGKFP---GPRIVAREGDQLLIKVVKHV-QNNISIHWHGIGQLRSGWADGPAYI------TQ-CPIQTGQGCVYNF 123 (162)
Q Consensus 55 ~~~~Ng~~P---GP~I~v~~Gd~v~v~v~N~l-~~~~siH~HGl~~~~~~~~DG~~~v------tq-~~I~PG~~~tY~f 123 (162)
.|++||+.- .|.++++.|++++.++.|.. ..+|.+|+||.+..... .||.+.- .. ..|. |++.+..+
T Consensus 379 ~~~ING~~~~~~~~~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~~F~Vl~-~~g~~~~~~~~~~kDTV~v~-g~~~~i~~ 456 (488)
T 3od3_A 379 ANKINGQAFDMNKPMFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILS-ENGKPPAAHRAGWKDTVKVE-GNVSEVLV 456 (488)
T ss_dssp CEEETTBCCCTTCCSEECCBSSCEEEEEECTTCCCCEEEEETTCCBEEEE-BTTBCCCGGGSSSBSEEEES-SSEEEEEE
T ss_pred eeeECCeeCCCCCCceEcCCCCEEEEEEEeCCCCCCccEEEcCceEEEec-cCCCccccccCCceeEEEeC-CCEEEEEE
Confidence 489999752 47799999999999999998 56899999999875432 3443310 00 1256 88888888
Q ss_pred Ee
Q 043378 124 TI 125 (162)
Q Consensus 124 ~~ 125 (162)
..
T Consensus 457 ~f 458 (488)
T 3od3_A 457 KF 458 (488)
T ss_dssp CB
T ss_pred Ee
Confidence 77
No 75
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=97.13 E-value=0.00074 Score=44.89 Aligned_cols=55 Identities=15% Similarity=0.211 Sum_probs=39.7
Q ss_pred ceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCccccCCccCCCCeEEEEEEeCCCcccCC
Q 043378 65 PRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPAYITQCPIQTGQGCVYNFTIVGQRGKLS 133 (162)
Q Consensus 65 P~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~~vtq~~I~PG~~~tY~f~~~~~~Gt~~ 133 (162)
+.|++++||+|++ .|....+|++|.++... +. .....+.||+++++.| +++|+|.
T Consensus 19 ~~i~v~~Gd~V~~--~n~~~~~H~v~~~~~~~----~~-----~~~~~~~~g~~~~~~f---~~~G~y~ 73 (91)
T 1bxv_A 19 STIEIQAGDTVQW--VNNKLAPHNVVVEGQPE----LS-----HKDLAFSPGETFEATF---SEPGTYT 73 (91)
T ss_dssp SEEEECTTCEEEE--EECSSCCEEEEETTCGG----GC-----EEEEECSTTCEEEEEC---CSCEEEE
T ss_pred CEEEECCCCEEEE--EECCCCCcEEEEeCCCc----cC-----cccceeCCCCEEEEEe---CCCEEEE
Confidence 5899999999765 58877889999886210 00 1123578999988877 5799983
No 76
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=97.09 E-value=0.00024 Score=48.20 Aligned_cols=65 Identities=12% Similarity=0.142 Sum_probs=42.6
Q ss_pred ceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCccccCCccCCCCeEEEEEEeCCCcccCCCCC
Q 043378 65 PRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPAYITQCPIQTGQGCVYNFTIVGQRGKLSPNP 136 (162)
Q Consensus 65 P~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~~vtq~~I~PG~~~tY~f~~~~~~Gt~~~~p 136 (162)
+.|++++||+|++ .|....+|++|.++...++.. .++.. .....+.||+++++.| +++|+|....
T Consensus 19 ~~i~v~~G~~V~~--~n~~~~~H~~~~~~~~~pg~~-~~~~~-~~~~~~~pG~~~~~tf---~~~G~y~~~C 83 (98)
T 1pcs_A 19 STVTIKAGEEVKW--VNNKLSPHNIVFDADGVPADT-AAKLS-HKGLLFAAGESFTSTF---TEPGTYTYYC 83 (98)
T ss_dssp SEEEECTTCEEEE--EECSSCCEEEEECCSSSCHHH-HHHHC-EEEEECSTTCEEEEEC---CSCEEEEEEC
T ss_pred CEEEECCCCEEEE--EECCCCCcEEEEeCCCCCccc-ccccc-ccccccCCCCEEEEEc---CCCeEEEEEc
Confidence 5899999998765 588778899999875432100 00000 1124578999999887 4799984333
No 77
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=97.06 E-value=0.00082 Score=45.41 Aligned_cols=66 Identities=14% Similarity=0.150 Sum_probs=44.3
Q ss_pred ceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCccc--cCCccCCCCeEEEEEEeCCCcccCCCCCCCCC
Q 043378 65 PRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPAYI--TQCPIQTGQGCVYNFTIVGQRGKLSPNPFAEP 140 (162)
Q Consensus 65 P~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~~v--tq~~I~PG~~~tY~f~~~~~~Gt~~~~p~p~~ 140 (162)
+.|++++||+| ++.|....+|+++.++...+ +|.... ....+.||+++++.| .++|+|..+.-+++
T Consensus 19 ~~i~v~~G~~V--~~~n~~~~~H~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~~H~ 86 (97)
T 1b3i_A 19 KALSISAGDTV--EFVMNKVGPHNVIFDKVPAG-----ESAPALSNTKLAIAPGSFYSVTL---GTPGTYSFYCTPHR 86 (97)
T ss_dssp SEEEECTTCEE--EEEECSSCCCCBEEEECCTT-----SCHHHHCBCCCCCSCSCCEEEEC---CSCSEEEEECSSTT
T ss_pred CEEEECCCCEE--EEEECCCCCeEEEEeCCCCc-----cccccccccceecCCCCEEEEEe---CCCeEEEEEccChh
Confidence 48999999985 55688777889888876432 221111 124578999998877 57999844443333
No 78
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=97.03 E-value=0.0017 Score=43.96 Aligned_cols=61 Identities=7% Similarity=0.035 Sum_probs=42.1
Q ss_pred ceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCcc------ccCCccCCCCeEEEEEEeCCCcccCCCC
Q 043378 65 PRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPAY------ITQCPIQTGQGCVYNFTIVGQRGKLSPN 135 (162)
Q Consensus 65 P~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~~------vtq~~I~PG~~~tY~f~~~~~~Gt~~~~ 135 (162)
+.|++++||+| +++|....+|++|.++...+ +|... .....+.||+++++.| +++|+|..+
T Consensus 17 ~~i~v~~G~tV--~~~n~~~~~H~~~~~~~~~p-----~g~~~~~~~~~~~~~~~~~G~~~~~~f---~~~G~y~~~ 83 (99)
T 1byp_A 17 SDLSIASGEKI--TFKNNAGFPHNDLFDKKEVP-----AGVDVTKISMPEEDLLNAPGEEYSVTL---TEKGTYKFY 83 (99)
T ss_dssp SEEEECTTEEE--EEEECSSCCBCCEECTTSSC-----TTCCHHHHSCCTTCCBCSTTCEEEEEE---CSCEEEEEE
T ss_pred CEEEECCCCEE--EEEECCCCcceEEEeCCCCc-----cccccccccccccceeeCCCCEEEEEe---CCCcEEEEE
Confidence 48999999985 55899888899999875332 22210 1113578999998877 379998433
No 79
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=96.99 E-value=0.0019 Score=43.77 Aligned_cols=62 Identities=10% Similarity=0.063 Sum_probs=42.0
Q ss_pred ceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCcc------ccCCccCCCCeEEEEEEeCCCcccCCCCC
Q 043378 65 PRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPAY------ITQCPIQTGQGCVYNFTIVGQRGKLSPNP 136 (162)
Q Consensus 65 P~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~~------vtq~~I~PG~~~tY~f~~~~~~Gt~~~~p 136 (162)
+.|++++||+|+ ++|....+|+++.++...+ ||... .....+.||+++++.| .++|+|..+.
T Consensus 17 ~~i~v~~G~tV~--~~n~~~~~H~v~~~~~~~p-----~~~~~~~~~~~~~~~~~~~G~~~~~tf---~~~G~y~~~C 84 (99)
T 1plc_A 17 SEFSISPGEKIV--FKNNAGFPHNIVFDEDSIP-----SGVDASKISMSEEDLLNAKGETFEVAL---SNKGEYSFYC 84 (99)
T ss_dssp SEEEECTTCEEE--EEECSSCCBCCEECTTSSC-----TTCCHHHHCCCTTCCBCSTTCEEEEEC---CSCEEEEEEC
T ss_pred CEEEECCCCEEE--EEECCCCceEEEEeCCCCc-----ccccccccccccCccccCCCCEEEEEE---CCCceEEEEc
Confidence 589999999765 5898878888888864322 22110 0113478999988877 3799984333
No 80
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=96.98 E-value=0.0018 Score=53.43 Aligned_cols=74 Identities=22% Similarity=0.220 Sum_probs=52.3
Q ss_pred EEEEECCCCC----CceEEEecCCEEEEEEEecCCC--CeeEEeeccccCCCCCCCCCcc------ccCCccCCCCeEEE
Q 043378 54 SIVSVNGKFP----GPRIVAREGDQLLIKVVKHVQN--NISIHWHGIGQLRSGWADGPAY------ITQCPIQTGQGCVY 121 (162)
Q Consensus 54 ~~~~~Ng~~P----GP~I~v~~Gd~v~v~v~N~l~~--~~siH~HGl~~~~~~~~DG~~~------vtq~~I~PG~~~tY 121 (162)
..+++||+.. -|.|.+++|+++++...|.... .+.||.|++.+. .||.+. +....|.||++++.
T Consensus 210 ~~~liNG~~~~~~~~~~l~v~~GervRlin~~~~~~~~~~~i~gh~~~Vi----~DG~~~~p~~~~~dtv~i~pGer~dv 285 (336)
T 1oe1_A 210 SHIVFNGKVGALTGANALTAKVGETVLLIHSQANRDTRPHLIGGHGDWVW----ETGKFANPPQRDLETWFIRGGSAGAA 285 (336)
T ss_dssp SEEEETTSTTTTSGGGCEEEETTCEEEEEEEESSSCBCEEETTCCEEEEE----TTCCTTSCCEEEESBCCBCTTEEEEE
T ss_pred CEEEECCeeccCCCCcceEcCCCCEEEEEecCCCCccceEEECCcCceEe----CCCcCcCCccccceEEEECCCCcEEE
Confidence 5789999864 3899999999988765555432 244555665442 577642 12345899999999
Q ss_pred EEEeCCCcccC
Q 043378 122 NFTIVGQRGKL 132 (162)
Q Consensus 122 ~f~~~~~~Gt~ 132 (162)
.+++ +++|+|
T Consensus 286 lv~~-~~pG~y 295 (336)
T 1oe1_A 286 LYTF-KQPGVY 295 (336)
T ss_dssp EEEC-CSCEEE
T ss_pred EEEc-CCCceE
Confidence 9999 578988
No 81
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=96.93 E-value=0.0017 Score=56.78 Aligned_cols=79 Identities=16% Similarity=0.179 Sum_probs=54.6
Q ss_pred EEEEECCCC-CCc-eEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCC---------------CCCCc--------cc
Q 043378 54 SIVSVNGKF-PGP-RIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGW---------------ADGPA--------YI 108 (162)
Q Consensus 54 ~~~~~Ng~~-PGP-~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~---------------~DG~~--------~v 108 (162)
..|.+||+. ..| .+.++.|+++++++.|....+|.+|+||........ .+|.+ +.
T Consensus 384 ~~~~iNg~~~~~~~~~~~~~g~~~~w~l~N~~~~~HP~HlHG~~F~Vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (513)
T 2wsd_A 384 PVLLLNNKRWHDPVTETPKVGTTEIWSIINPTRGTHPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPPPPSEKGW 463 (513)
T ss_dssp EEEEETTBCTTSCCCBCCBTTCEEEEEEEECSSSCEEEEESSCCEEEEEEEEBCHHHHHHHCCCCBSSCCBCCCGGGSSC
T ss_pred ceEeECCccCCCcccEecCCCCEEEEEEEcCCCCCcCEeEeCceEEEEEecCcccccccccccccccCCCCCCCccccCc
Confidence 367899974 344 578999999999999999999999999988532110 01111 00
Q ss_pred c-CCccCCCCeEEEEEEeCCCcccC
Q 043378 109 T-QCPIQTGQGCVYNFTIVGQRGKL 132 (162)
Q Consensus 109 t-q~~I~PG~~~tY~f~~~~~~Gt~ 132 (162)
. -..|+||+..+..++..+.+|.|
T Consensus 464 rDTv~v~pg~~~~i~~~f~dnpG~w 488 (513)
T 2wsd_A 464 KDTIQAHAGEVLRIAATFGPYSGRY 488 (513)
T ss_dssp BSEEEECTTEEEEEEEECCSCCEEE
T ss_pred ccEEEeCCCCEEEEEEEecCCCCCE
Confidence 0 12368898887777764578877
No 82
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=96.89 E-value=0.0018 Score=57.05 Aligned_cols=66 Identities=12% Similarity=0.072 Sum_probs=51.5
Q ss_pred eEEEecCCEEEEEEEecCCC-CeeEEeeccccCCCCCCCCCcc----ccCCccCCCCeEEEEEEe-CCCcccC
Q 043378 66 RIVAREGDQLLIKVVKHVQN-NISIHWHGIGQLRSGWADGPAY----ITQCPIQTGQGCVYNFTI-VGQRGKL 132 (162)
Q Consensus 66 ~I~v~~Gd~v~v~v~N~l~~-~~siH~HGl~~~~~~~~DG~~~----vtq~~I~PG~~~tY~f~~-~~~~Gt~ 132 (162)
.|.+++|+++++++.|.... ...+|++|....... .||.+. +....|.||++++..+++ .+.+|.|
T Consensus 205 ~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y 276 (552)
T 1aoz_A 205 IFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVE-ADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENY 276 (552)
T ss_dssp CEEECTTCEEEEEEEECCSSCEEEEEETTCCEEEEE-ETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCE
T ss_pred EEEEcCCCEEEEEEEcccccceEEEEEcCcEEEEEE-ECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCE
Confidence 89999999999999999854 567899988765442 798642 234558999999999998 3446766
No 83
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=96.87 E-value=0.0016 Score=44.37 Aligned_cols=62 Identities=10% Similarity=0.005 Sum_probs=40.9
Q ss_pred ceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCC-------CCccc--cCCccCCCCeEEEEEEeCCCcccCCCC
Q 043378 65 PRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWAD-------GPAYI--TQCPIQTGQGCVYNFTIVGQRGKLSPN 135 (162)
Q Consensus 65 P~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~D-------G~~~v--tq~~I~PG~~~tY~f~~~~~~Gt~~~~ 135 (162)
+.|++++||+|+ +.|....+|+++.+. +.. .+ ..+.+ ....+.||+++++.| .++|+|..+
T Consensus 17 ~~i~v~~G~tV~--~~n~~~~~H~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~y~ 86 (102)
T 1kdj_A 17 DSITVSAGEAVE--FTLVGETGHNIVFDI---PAG--APGTVASELKAASMDENDLLSEDEPSFKAKV---STPGTYTFY 86 (102)
T ss_dssp SEEEECTTCCEE--EEECSSSCBCCEECC---CTT--CCHHHHHHHHHTSCCTTCCBBTTBCEEEECC---CSCEEEEEE
T ss_pred CEEEECCCCEEE--EEECCCCCeEEEEeC---ccc--ccccccchhhcccccccceecCCCCEEEEEe---CCCeEEEEE
Confidence 589999999976 568887788888872 111 11 00111 123478999998877 479998444
Q ss_pred C
Q 043378 136 P 136 (162)
Q Consensus 136 p 136 (162)
.
T Consensus 87 C 87 (102)
T 1kdj_A 87 C 87 (102)
T ss_dssp C
T ss_pred e
Confidence 4
No 84
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=96.82 E-value=0.002 Score=57.65 Aligned_cols=78 Identities=10% Similarity=0.005 Sum_probs=60.5
Q ss_pred EEEEECCCCC----------------CceEEEecCCEEEEEEEecCCC-CeeEEeeccccCCCCCCCCCcc----ccCCc
Q 043378 54 SIVSVNGKFP----------------GPRIVAREGDQLLIKVVKHVQN-NISIHWHGIGQLRSGWADGPAY----ITQCP 112 (162)
Q Consensus 54 ~~~~~Ng~~P----------------GP~I~v~~Gd~v~v~v~N~l~~-~~siH~HGl~~~~~~~~DG~~~----vtq~~ 112 (162)
..+.+||+.. -+++.+++|+++++|+.|.... ...+|.+|..+.... .||.+- +....
T Consensus 226 d~~liNG~~~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa-~DG~~v~P~~~~~l~ 304 (580)
T 3sqr_A 226 ENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIA-NDLVPIVPYTTDTLL 304 (580)
T ss_dssp SEEEETTBCCCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-ETTEEEEEEEESSEE
T ss_pred ceEEECCcccCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEE-eCCccCCceEeeEEE
Confidence 3577898632 3799999999999999999854 468999998775443 798752 23345
Q ss_pred cCCCCeEEEEEEeCCCcccC
Q 043378 113 IQTGQGCVYNFTIVGQRGKL 132 (162)
Q Consensus 113 I~PG~~~tY~f~~~~~~Gt~ 132 (162)
|.||++++..+++++.+|.|
T Consensus 305 i~pGqRydVlv~a~~~~g~Y 324 (580)
T 3sqr_A 305 IGIGQRYDVIVEANAAADNY 324 (580)
T ss_dssp ECTTCEEEEEEECCSCSSEE
T ss_pred EccceEEEEEEEeCCCCCeE
Confidence 89999999999996667777
No 85
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=96.73 E-value=0.0032 Score=43.62 Aligned_cols=60 Identities=12% Similarity=0.124 Sum_probs=39.6
Q ss_pred ceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCccccCCccCCCCeEEEEEEeCCCcccCCCCC
Q 043378 65 PRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPAYITQCPIQTGQGCVYNFTIVGQRGKLSPNP 136 (162)
Q Consensus 65 P~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~~vtq~~I~PG~~~tY~f~~~~~~Gt~~~~p 136 (162)
..|++++||+|++ .|....+|+++...... |........+.||+++++.| +++|+|..+.
T Consensus 34 ~~i~V~~G~tV~~--~N~d~~~H~v~~~~~~~-------~~~~~~s~~l~~g~~~~~tf---~~~G~y~~~C 93 (106)
T 1id2_A 34 PEVTIKAGETVYW--VNGEVMPHNVAFKKGIV-------GEDAFRGEMMTKDQAYAITF---NEAGSYDYFC 93 (106)
T ss_dssp SEEEECTTCEEEE--EECSSSCBCCEECTTTS-------SSSCEECCCBCTTEEEEEEE---CSCEEEEEEC
T ss_pred CEEEECCCCEEEE--EECCCCcEEEEEeCCCC-------CcccccccccCCCCEEEEEe---CCCEEEEEEe
Confidence 5999999999765 58877677766654221 11111123478999998888 4789984444
No 86
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=96.68 E-value=0.0011 Score=58.40 Aligned_cols=77 Identities=13% Similarity=0.015 Sum_probs=54.4
Q ss_pred EEEECCCCC----Cc-eEEEecCCEEEEEEEecCC-CCeeEEeeccccCCCCCCCCC------cc----ccCCccCCCCe
Q 043378 55 IVSVNGKFP----GP-RIVAREGDQLLIKVVKHVQ-NNISIHWHGIGQLRSGWADGP------AY----ITQCPIQTGQG 118 (162)
Q Consensus 55 ~~~~Ng~~P----GP-~I~v~~Gd~v~v~v~N~l~-~~~siH~HGl~~~~~~~~DG~------~~----vtq~~I~PG~~ 118 (162)
.|++||... .| .+.++.|+.+++.+.|... .+|.+|+||.+.......+|. +. -.-..|+||+.
T Consensus 360 ~w~iNG~~f~~~~~p~l~~v~~G~~~~w~i~N~~~~~~HP~HLHG~~F~Vl~~~~g~~~~~~~~~~~~~rDTV~v~pg~~ 439 (534)
T 3abg_A 360 TWTINGVAFADVQNRLLANVPVGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNARTVMPYESGLKDVVWLGRRET 439 (534)
T ss_dssp TTCCCCBTTBCTTSCCCCEECTTCEEEEEEEECSSSCCCCEEESSCCEEEEEESSCCSSSCCCSGGGSCBSEECCCSSEE
T ss_pred eeEECCcccCCCCCcceeeccCCCEEEEEEEcCCCCCCcCEEECCeeEEEEEEcCCCCcCcCCccccCCcCeEEcCCCCE
Confidence 478898642 24 4689999999999999874 599999999886433212331 00 00124789999
Q ss_pred EEEEEE-eCCCcccC
Q 043378 119 CVYNFT-IVGQRGKL 132 (162)
Q Consensus 119 ~tY~f~-~~~~~Gt~ 132 (162)
.+.+|. + +.+|.|
T Consensus 440 v~I~~~~a-dnpG~w 453 (534)
T 3abg_A 440 VVVEAHYA-PFPGVY 453 (534)
T ss_dssp EEEEEECC-SCCEEE
T ss_pred EEEEEEEC-CCCccE
Confidence 999998 6 689998
No 87
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=96.51 E-value=0.0066 Score=41.12 Aligned_cols=62 Identities=15% Similarity=0.149 Sum_probs=41.1
Q ss_pred ceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCcc--c--cCCccCCCCeEEEEEEeCCCcccCCCCC
Q 043378 65 PRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPAY--I--TQCPIQTGQGCVYNFTIVGQRGKLSPNP 136 (162)
Q Consensus 65 P~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~~--v--tq~~I~PG~~~tY~f~~~~~~Gt~~~~p 136 (162)
+.|++++||+|++ .|....+|++..+.-.. .+|... + ....+.||+++++.| +++|+|..+.
T Consensus 18 ~~i~v~~GdtV~~--~n~~~~~H~v~~~~~~~-----p~g~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C 83 (98)
T 1iuz_A 18 SKISVAAGEAIEF--VNNAGFPHNIVFDEDAV-----PAGVDADAISYDDYLNSKGETVVRKL---STPGVYGVYC 83 (98)
T ss_dssp SEEEECTTCEEEE--EECSSCCEEEEECTTSS-----CTTCCHHHHCEEEEECSTTCEEEEEC---CSCEEEEEEC
T ss_pred CEEEECCCCEEEE--EECCCCCEEEEEeCCCC-----ccccccccccccccccCCCCEEEEEc---CCCEEEEEEc
Confidence 5899999999655 68877788887764221 223210 0 112478999998887 4799985444
No 88
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=96.48 E-value=0.013 Score=42.39 Aligned_cols=72 Identities=8% Similarity=-0.016 Sum_probs=44.0
Q ss_pred ceEEEecC-CEEEEEEEecCCCC-----eeE--EeeccccC----------CCCC-CCCCcc-c-cCCccCCCCeEEEEE
Q 043378 65 PRIVAREG-DQLLIKVVKHVQNN-----ISI--HWHGIGQL----------RSGW-ADGPAY-I-TQCPIQTGQGCVYNF 123 (162)
Q Consensus 65 P~I~v~~G-d~v~v~v~N~l~~~-----~si--H~HGl~~~----------~~~~-~DG~~~-v-tq~~I~PG~~~tY~f 123 (162)
..|.|++| |+|+|+++|....+ |.+ --+|.... ...+ ..+.+. + ....|.||++.++.|
T Consensus 18 ~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~svtf 97 (129)
T 1cuo_A 18 RSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKTSVKF 97 (129)
T ss_dssp SEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEEEEEE
T ss_pred CeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCEEEEEE
Confidence 48999999 99999999998643 443 33332110 0000 000011 0 123578999999999
Q ss_pred EeC--CCcccCCCCC
Q 043378 124 TIV--GQRGKLSPNP 136 (162)
Q Consensus 124 ~~~--~~~Gt~~~~p 136 (162)
+++ .++|+|.-+.
T Consensus 98 ~~~~~~~~G~Y~f~C 112 (129)
T 1cuo_A 98 KVSALSKDEAYTYFC 112 (129)
T ss_dssp EGGGCCTTSCEEEEC
T ss_pred eccccCCCceEEEEe
Confidence 983 3899995443
No 89
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=96.26 E-value=0.0067 Score=43.60 Aligned_cols=63 Identities=8% Similarity=-0.015 Sum_probs=40.0
Q ss_pred ceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCccccCCccCCCCeEEEEEEeCCCcccCCCCCCCCCC
Q 043378 65 PRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPAYITQCPIQTGQGCVYNFTIVGQRGKLSPNPFAEPY 141 (162)
Q Consensus 65 P~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~~vtq~~I~PG~~~tY~f~~~~~~Gt~~~~p~p~~d 141 (162)
..|++++||+|++.++| .+|++..+.- .+.||.. ...+.||++++|.| +++|+|..+.-+++.
T Consensus 21 ~~i~V~~GdtV~f~~~~---~~H~v~~~~~-----~~P~g~~---~f~~~pg~t~s~TF---~~pG~y~y~C~~H~~ 83 (123)
T 3erx_A 21 AFVRAEPGDVINFVPTD---KSHNVEAIKE-----ILPEGVE---SFKSKINESYTLTV---TEPGLYGVKCTPHFG 83 (123)
T ss_dssp SEEEECTTEEEEEEESS---TTCCCEECTT-----SSCTTCC---CCBCCTTCCEEEEE---CSCEEEEEECGGGTT
T ss_pred CEEEECCCCEEEEEECC---CCceEEEcCC-----cCCCCcc---ceecCCCCEEEEEe---CCCeEEEEEeCCCCc
Confidence 49999999998887776 2444444321 1234431 23357999988888 479999555544443
No 90
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=96.25 E-value=0.0066 Score=53.47 Aligned_cols=44 Identities=11% Similarity=-0.006 Sum_probs=36.7
Q ss_pred eEEEEECCCCC--CceEEEecCCEEEEEEEecCCCCeeEEeecccc
Q 043378 53 KSIVSVNGKFP--GPRIVAREGDQLLIKVVKHVQNNISIHWHGIGQ 96 (162)
Q Consensus 53 ~~~~~~Ng~~P--GP~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~ 96 (162)
...+.+|+... ...+.++.|+.+++.+.|....+|-+|+||.++
T Consensus 458 ~~~~~~n~~~~~~~~~~~~~~g~~~~w~i~N~~~~~HP~HLHG~~F 503 (612)
T 3gyr_A 458 TKTYRRTARTFNDGLGFTIGEGTHEQWTFLNLSPILHPMHIHLADF 503 (612)
T ss_dssp EEEEEEEECSTTSCCCEEEETTCEEEEEEEECSSSCEEEEESSCEE
T ss_pred cccccccCccCCCCcceEeCCCCEEEEEEEcCCCCCcCEeECCCcE
Confidence 34566776543 367899999999999999999999999999876
No 91
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=96.11 E-value=0.0091 Score=43.07 Aligned_cols=63 Identities=13% Similarity=-0.014 Sum_probs=41.3
Q ss_pred ceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCccccCCccCCCCeEEEEEEeCCCcccCCCCCCCCCC
Q 043378 65 PRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPAYITQCPIQTGQGCVYNFTIVGQRGKLSPNPFAEPY 141 (162)
Q Consensus 65 P~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~~vtq~~I~PG~~~tY~f~~~~~~Gt~~~~p~p~~d 141 (162)
..|++++||+|+ ++|.. .+|++..+.... .+|.. ...+.||++++|.| +.+|+|..+.-+++.
T Consensus 22 ~~i~V~~GDTV~--f~n~~-~~Hnv~~~~~~~-----p~g~~---~~~~~pg~t~s~TF---~~~G~y~Y~C~~H~~ 84 (124)
T 3ef4_A 22 GFVKVEAGDTVK--FVPTD-KSHNAESVREVW-----PEGVA---PVKGGFSKEVVFNA---EKEGLYVLKCAPHYG 84 (124)
T ss_dssp SEEEECTTCEEE--EECSS-SSCCCEECTTTS-----CTTSC---CCBCCTTCCEEEEC---CSSEEEEEECTTTGG
T ss_pred CEEEECCCCEEE--EEECC-CCccEEEeCCcC-----CCCcc---ccccCCCCEEEEEe---CCCeEEEEEcCCCCc
Confidence 599999999965 45554 577776653211 23321 23467999988888 478999666644443
No 92
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=95.83 E-value=0.017 Score=43.71 Aligned_cols=72 Identities=8% Similarity=-0.002 Sum_probs=43.5
Q ss_pred ceEEE-ecCCEEEEEEEecCCCC-----eeEE--eecccc---------CCCCC---CCCCccccCCccCCCCeEEEEEE
Q 043378 65 PRIVA-REGDQLLIKVVKHVQNN-----ISIH--WHGIGQ---------LRSGW---ADGPAYITQCPIQTGQGCVYNFT 124 (162)
Q Consensus 65 P~I~v-~~Gd~v~v~v~N~l~~~-----~siH--~HGl~~---------~~~~~---~DG~~~vtq~~I~PG~~~tY~f~ 124 (162)
..|.| +.||+|+|+|+|....+ |.+- -+|... -...+ .|.--......|.||+++++.|.
T Consensus 58 ~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pGet~svtf~ 137 (167)
T 3ay2_A 58 KDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESSLTLD 137 (167)
T ss_dssp SEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTTCEEEEEEC
T ss_pred ceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccccccccchhccceeeCCCCEEEEEEe
Confidence 48999 99999999999998754 4332 233110 00000 01100011235799999999998
Q ss_pred eC-CCcccCCCCC
Q 043378 125 IV-GQRGKLSPNP 136 (162)
Q Consensus 125 ~~-~~~Gt~~~~p 136 (162)
++ -++|+|.-+.
T Consensus 138 ~~~lkpG~Y~f~C 150 (167)
T 3ay2_A 138 PAKLADGDYKFAC 150 (167)
T ss_dssp GGGGTTSCEEEEC
T ss_pred cCCCCCcEEEEEc
Confidence 73 1799995444
No 93
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=95.79 E-value=0.0075 Score=43.61 Aligned_cols=63 Identities=11% Similarity=0.024 Sum_probs=39.7
Q ss_pred ceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCccccCCccCCCCeEEEEEEeCCCcccCCCCCCCCCC
Q 043378 65 PRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPAYITQCPIQTGQGCVYNFTIVGQRGKLSPNPFAEPY 141 (162)
Q Consensus 65 P~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~~vtq~~I~PG~~~tY~f~~~~~~Gt~~~~p~p~~d 141 (162)
+.|++++||+|++.++|. +|++..+.-. +.||.. ...+.||++++|.| +++|+|..+.-+++.
T Consensus 23 ~~i~V~~GDtVtf~n~~~---~H~v~~~~~~-----~P~g~~---~f~s~pGet~s~TF---~~pG~y~y~C~~H~~ 85 (127)
T 3tu6_A 23 AVIRAQPGDTVTFVAKDK---GHNSALMKGG-----APEGAE---TWKGKINEEITVTL---SKPGVYMYQCAPHVG 85 (127)
T ss_dssp SEEEECTTCEEEEECSSS---SCCCEECTTC-----SCTTCC---CCBCCTTCCCEEEC---CSCEEEEEECTTTGG
T ss_pred CEEEECCCCEEEEEECCC---CceEEEccCc-----CCCCcc---ceecCCCCEEEEEe---CCCeEEEEEeCCCCc
Confidence 599999999977666553 4555443211 123321 23457999988888 579999655544443
No 94
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=95.74 E-value=0.044 Score=39.53 Aligned_cols=72 Identities=14% Similarity=0.149 Sum_probs=42.9
Q ss_pred ceEEE-ecCCEEEEEEEecCCCC-----eeEEeec-----------ccc-CCCCC--CCCCccc-cCCccCCCCeEEEEE
Q 043378 65 PRIVA-REGDQLLIKVVKHVQNN-----ISIHWHG-----------IGQ-LRSGW--ADGPAYI-TQCPIQTGQGCVYNF 123 (162)
Q Consensus 65 P~I~v-~~Gd~v~v~v~N~l~~~-----~siH~HG-----------l~~-~~~~~--~DG~~~v-tq~~I~PG~~~tY~f 123 (162)
..|.+ +.||+|+|+++|....+ |++-+=. +.. +...+ .|....+ ....|.||+++++.|
T Consensus 17 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGes~~vtf 96 (128)
T 2iaa_C 17 KSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGETDSVTF 96 (128)
T ss_dssp SEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEEEEE
T ss_pred CEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccchhhccceeeCCCCEEEEEE
Confidence 48999 99999999999998764 5543321 000 00000 0111001 123579999999999
Q ss_pred EeCC-Cccc-CCCCC
Q 043378 124 TIVG-QRGK-LSPNP 136 (162)
Q Consensus 124 ~~~~-~~Gt-~~~~p 136 (162)
.++. ++|+ |.-+.
T Consensus 97 ~~~~l~~G~~Y~f~C 111 (128)
T 2iaa_C 97 DVSKLKEGEDYAFFC 111 (128)
T ss_dssp ESSCCCTTCCEEEEC
T ss_pred eccccCCCceEEEEE
Confidence 9831 6885 84443
No 95
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=95.67 E-value=0.042 Score=39.64 Aligned_cols=72 Identities=10% Similarity=0.039 Sum_probs=42.8
Q ss_pred ceEEE-ecCCEEEEEEEecCCCC-----eeEEe--ecccc-------CCC---CC--CCCCccc-cCCccCCCCeEEEEE
Q 043378 65 PRIVA-REGDQLLIKVVKHVQNN-----ISIHW--HGIGQ-------LRS---GW--ADGPAYI-TQCPIQTGQGCVYNF 123 (162)
Q Consensus 65 P~I~v-~~Gd~v~v~v~N~l~~~-----~siH~--HGl~~-------~~~---~~--~DG~~~v-tq~~I~PG~~~tY~f 123 (162)
..|.+ +.||+|+|+++|....+ |++-. .|... ... .+ .|....+ ....|.||++++..|
T Consensus 18 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet~svtf 97 (128)
T 1nwp_A 18 KDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKDSVTF 97 (128)
T ss_dssp SEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEEEEEE
T ss_pred CEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCEEEEEE
Confidence 48999 99999999999998664 54433 22110 000 00 0111001 112479999999999
Q ss_pred EeCC-Cccc-CCCCC
Q 043378 124 TIVG-QRGK-LSPNP 136 (162)
Q Consensus 124 ~~~~-~~Gt-~~~~p 136 (162)
.++. ++|+ |.-+.
T Consensus 98 ~~~~l~~G~~Y~f~C 112 (128)
T 1nwp_A 98 DVSKLAAGEKYGFFC 112 (128)
T ss_dssp EGGGSCTTSCEEEEC
T ss_pred eccccCCCceEEEEE
Confidence 9831 5776 84443
No 96
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=95.57 E-value=0.049 Score=39.31 Aligned_cols=72 Identities=15% Similarity=0.101 Sum_probs=42.1
Q ss_pred ceEEE-ecCCEEEEEEEecCCCC-----eeEE--eecccc----------CCCCC--CCCCccc-cCCccCCCCeEEEEE
Q 043378 65 PRIVA-REGDQLLIKVVKHVQNN-----ISIH--WHGIGQ----------LRSGW--ADGPAYI-TQCPIQTGQGCVYNF 123 (162)
Q Consensus 65 P~I~v-~~Gd~v~v~v~N~l~~~-----~siH--~HGl~~----------~~~~~--~DG~~~v-tq~~I~PG~~~tY~f 123 (162)
..|.| ++||+|+|+++|....+ |.+- -+|... +...+ .|....+ ....|.||++.+..|
T Consensus 18 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet~svtf 97 (129)
T 2ccw_A 18 KEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESDSVTF 97 (129)
T ss_dssp SEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEEEEE
T ss_pred ceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccccceeeeeEECCCCEEEEEE
Confidence 48999 99999999999998654 4433 233110 00000 0111001 123579999999999
Q ss_pred EeC-CCccc-CCCCC
Q 043378 124 TIV-GQRGK-LSPNP 136 (162)
Q Consensus 124 ~~~-~~~Gt-~~~~p 136 (162)
.++ -++|+ |.-+.
T Consensus 98 ~~~~l~~G~~Y~f~C 112 (129)
T 2ccw_A 98 DVSKIAAGENYAYFC 112 (129)
T ss_dssp EGGGSCTTCCEEEEC
T ss_pred eccccCCCceEEEEe
Confidence 983 05655 74443
No 97
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.57 E-value=0.039 Score=49.60 Aligned_cols=64 Identities=14% Similarity=0.182 Sum_probs=45.2
Q ss_pred EEEECCCCCCceEEEecCCEEEEEEEecC---CCCeeEEeeccccCCCCCCCCCccccCCccCCCCeEEEEEEeCCCccc
Q 043378 55 IVSVNGKFPGPRIVAREGDQLLIKVVKHV---QNNISIHWHGIGQLRSGWADGPAYITQCPIQTGQGCVYNFTIVGQRGK 131 (162)
Q Consensus 55 ~~~~Ng~~PGP~I~v~~Gd~v~v~v~N~l---~~~~siH~HGl~~~~~~~~DG~~~vtq~~I~PG~~~tY~f~~~~~~Gt 131 (162)
+...+-.|--+.|++++||+|++.++|.. +..|++...++ |+ ...+.||++.++.|.+ +++|+
T Consensus 548 Mta~~~~FsP~eI~VP~GdtVrfiLTN~D~veDViHSF~IPsl---------GI----K~DaiPGrtnsvtFta-dkPGv 613 (638)
T 3sbq_A 548 MTSMAPAFGVQEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNH---------GV----SMEISPQQTSSITFVA-DKPGL 613 (638)
T ss_dssp EEEETTEESCCEEEEETTCEEEEEEEECCCSTTCCEEEEETTT---------TE----EEEECTTCEEEEEEEC-CSCEE
T ss_pred EEEEcccccCCEEEEecCceeEEEEecCCcCCCceeeeEecCC---------Cc----eeeeCCCCeEEEEEEc-CCCEE
Confidence 33444455557999999999999999974 33443333221 11 1346899999999999 69999
Q ss_pred C
Q 043378 132 L 132 (162)
Q Consensus 132 ~ 132 (162)
|
T Consensus 614 Y 614 (638)
T 3sbq_A 614 H 614 (638)
T ss_dssp E
T ss_pred E
Confidence 9
No 98
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=95.36 E-value=0.023 Score=48.91 Aligned_cols=89 Identities=9% Similarity=-0.023 Sum_probs=62.8
Q ss_pred EEEEEEEEEEEEec-------------CCeeeEEEEECCCCCCceEEEecCCEEEEEEEecCCC-CeeEEe--ec---cc
Q 043378 35 RHCKFDIKLQNATR-------------LCHTKSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQN-NISIHW--HG---IG 95 (162)
Q Consensus 35 ~~~~l~i~~~~~~~-------------~g~~~~~~~~Ng~~PGP~I~v~~Gd~v~v~v~N~l~~-~~siH~--HG---l~ 95 (162)
+++.|.+++-.... .|..-..+.+||+. .|+|.+++| ++++++.|.... ...+|+ +| ..
T Consensus 138 ~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~ 215 (448)
T 3aw5_A 138 NDLPLVISDRRFIGGAPVYNPTPMEMIAGFLGNAVLVNGVK-DAVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVP 215 (448)
T ss_dssp TEEEEEEEEEEEETTEEECCCCHHHHHHCCCCSEEEETTEE-TCEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEEC
T ss_pred ceEEEEEEeeccCCCcccccccccccccCccccEEEECCcc-cceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCcc
Confidence 56777776654432 01223578999984 589999999 999999999854 578999 77 44
Q ss_pred cCCCCCCCCCcc-----ccCCccCCCCeEEEEEEeC
Q 043378 96 QLRSGWADGPAY-----ITQCPIQTGQGCVYNFTIV 126 (162)
Q Consensus 96 ~~~~~~~DG~~~-----vtq~~I~PG~~~tY~f~~~ 126 (162)
.... ..||.+. +....|.||++++..++++
T Consensus 216 ~~vi-a~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~ 250 (448)
T 3aw5_A 216 MRLI-AVDQGFLARPIEVRALFLAPAERAEVVVELG 250 (448)
T ss_dssp EEEE-EETTEEEEEEEEESCEEECTTCEEEEEEEEC
T ss_pred EEEE-EeCCCccCCceEeceEEECCcceEEEEEECC
Confidence 4322 2798752 2234589999999888874
No 99
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=95.25 E-value=0.031 Score=39.82 Aligned_cols=58 Identities=10% Similarity=0.088 Sum_probs=36.7
Q ss_pred ceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCccccCCccCCCCeEEEEEEeCCCcccCCCCC
Q 043378 65 PRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPAYITQCPIQTGQGCVYNFTIVGQRGKLSPNP 136 (162)
Q Consensus 65 P~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~~vtq~~I~PG~~~tY~f~~~~~~Gt~~~~p 136 (162)
+.|++++||+|++ .|... .|+++.+.- .+.+|.. ...+.||++++|.| +++|+|..+.
T Consensus 21 ~~i~V~~GdtV~f--~n~d~-~H~v~~~~~-----~~p~~~~---~~~~~~g~t~~~tF---~~~G~y~y~C 78 (122)
T 2ux6_A 21 ASLKVAPGDTVTF--IPTDK-GHNVETIKG-----MIPDGAE---AFKSKINENYKVTF---TAPGVYGVKC 78 (122)
T ss_dssp SEEEECTTEEEEE--EESSS-SCCCEECTT-----CSCTTCC---CCBCCTTCCEEEEE---CSCEEEEEEE
T ss_pred CEEEECCCCEEEE--EECCC-CcEEEEccc-----ccCCCcc---eeecCCCCEEEEEe---CCCEEEEEEe
Confidence 4899999998655 56644 555555431 1123321 13457999988888 4789995444
No 100
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=95.04 E-value=0.036 Score=39.62 Aligned_cols=62 Identities=13% Similarity=0.076 Sum_probs=37.0
Q ss_pred ceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCccccCCccCCCCeEEEEEEeCCCcccCCCCCCCCC
Q 043378 65 PRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPAYITQCPIQTGQGCVYNFTIVGQRGKLSPNPFAEP 140 (162)
Q Consensus 65 P~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~~vtq~~I~PG~~~tY~f~~~~~~Gt~~~~p~p~~ 140 (162)
+.|++++||+|++ +|... +|++..+- ..+.||... ....||++++|.| +++|+|..+.-+++
T Consensus 21 ~~i~V~~GdtV~f--~~~~~-~H~v~~~~-----~~~p~~~~~---~~~~pG~t~~~tF---~~~G~y~y~C~~H~ 82 (123)
T 1paz_A 21 AYIKANPGDTVTF--IPVDK-GHNVESIK-----DMIPEGAEK---FKSKINENYVLTV---TQPGAYLVKCTPHY 82 (123)
T ss_dssp SEEEECTTCEEEE--EESSS-SCCCEECT-----TCSCTTCCC---CBCCTTCCEEEEC---CSCEEEEEECTTTG
T ss_pred CEEEECCCCEEEE--EECCC-CeEEEEec-----ccCCCCccc---eecCCCCEEEEEe---CCCEEEEEEeCCcc
Confidence 5899999999755 55543 45554431 111233211 2346999888777 47999955553333
No 101
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=94.74 E-value=0.032 Score=39.84 Aligned_cols=62 Identities=15% Similarity=0.139 Sum_probs=37.7
Q ss_pred ceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCccccCCccCCCCeEEEEEEeCCCcccCCCCCCCCC
Q 043378 65 PRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPAYITQCPIQTGQGCVYNFTIVGQRGKLSPNPFAEP 140 (162)
Q Consensus 65 P~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~~vtq~~I~PG~~~tY~f~~~~~~Gt~~~~p~p~~ 140 (162)
+.|++++||+|+ ++|... +|++..+. ..+.||.. ...+.||++++|.| +++|+|..+.-+++
T Consensus 21 ~~i~V~~GdtV~--f~n~~~-~H~v~~~~-----~~~p~~~~---~~~~~pG~t~~~tF---~~~G~y~y~C~~H~ 82 (123)
T 1pmy_A 21 ALVRLKPGDSIK--FLPTDK-GHNVETIK-----GMAPDGAD---YVKTTVGQEAVVKF---DKEGVYGFKCAPHY 82 (123)
T ss_dssp SEEEECTTCEEE--EECSSS-SCCCEECT-----TSSCTTCC---CCBCCTTSCEEEEC---CSCEEEEEECSTTT
T ss_pred CEEEECCCCEEE--EEECCC-CcEEEEec-----ccCCCCcc---ceecCCCCEEEEEe---CCCeEEEEEeCCcc
Confidence 589999999965 556543 55554431 11233321 12357999988877 47999955543344
No 102
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=93.17 E-value=0.15 Score=36.96 Aligned_cols=52 Identities=15% Similarity=0.257 Sum_probs=37.4
Q ss_pred eEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCccccCCccCCCCeEEEEEEeCCCcccC
Q 043378 66 RIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPAYITQCPIQTGQGCVYNFTIVGQRGKL 132 (162)
Q Consensus 66 ~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~~vtq~~I~PG~~~tY~f~~~~~~Gt~ 132 (162)
.|.++.|++|++.++|.. .. |+...+. .|. ..-+.||+.-++.|+. +++|+|
T Consensus 61 ~l~Vp~G~~V~~~vts~D-V~-----Hsf~ip~----~~~----k~d~~PG~~~~~~~~~-~~~G~y 112 (135)
T 2cua_A 61 PIEVPQGAEIVFKITSPD-VI-----HGFHVEG----TNI----NVEVLPGEVSTVRYTF-KRPGEY 112 (135)
T ss_dssp SEEEETTSEEEEEEEBSS-SC-----EEEEETT----SSC----EEEECBTBCEEEEEEC-CSCEEE
T ss_pred EEEEcCCCEEEEEEEeCC-cc-----ceEEecC----CCc----eeEeCCCCcEEEEEEc-CCCEEE
Confidence 799999999999999973 33 3443332 111 1235789888888888 689999
No 103
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=92.90 E-value=0.41 Score=34.46 Aligned_cols=74 Identities=9% Similarity=0.032 Sum_probs=41.6
Q ss_pred CCceEEEec-CCEEEEEEEecCCCC-----ee--EEe------e---ccccC-CCCCC-CCCcc-c-cCCccCCCCeEEE
Q 043378 63 PGPRIVARE-GDQLLIKVVKHVQNN-----IS--IHW------H---GIGQL-RSGWA-DGPAY-I-TQCPIQTGQGCVY 121 (162)
Q Consensus 63 PGP~I~v~~-Gd~v~v~v~N~l~~~-----~s--iH~------H---Gl~~~-~~~~~-DG~~~-v-tq~~I~PG~~~tY 121 (162)
--..|.|++ |++|+|+|+|....| |+ |-- | |+..- ...|. .+-+. + ....|.||++++.
T Consensus 16 ~p~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~~v 95 (125)
T 3fsa_A 16 NTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDSV 95 (125)
T ss_dssp SCSEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEEEE
T ss_pred ecCEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEEEE
Confidence 335899986 999999999999653 33 321 1 11110 00111 01111 1 1234799999999
Q ss_pred EEEeC--CCcccCCCCC
Q 043378 122 NFTIV--GQRGKLSPNP 136 (162)
Q Consensus 122 ~f~~~--~~~Gt~~~~p 136 (162)
.|+.+ .++|+|.-+.
T Consensus 96 tf~~~~l~~~G~y~f~C 112 (125)
T 3fsa_A 96 TFDVSKLKEGEQYMFFC 112 (125)
T ss_dssp EEEGGGC---CCEEEEC
T ss_pred EEeCcCcCCCccEEEEc
Confidence 99984 2789984333
No 104
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=91.59 E-value=0.3 Score=36.84 Aligned_cols=53 Identities=15% Similarity=0.283 Sum_probs=37.8
Q ss_pred ceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCccccCCccCCCCeEEEEEEeCCCcccC
Q 043378 65 PRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPAYITQCPIQTGQGCVYNFTIVGQRGKL 132 (162)
Q Consensus 65 P~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~~vtq~~I~PG~~~tY~f~~~~~~Gt~ 132 (162)
..|.++.|++|++.++|. +..|+...-++ |. +.-+.||+..+..|.+ +++|+|
T Consensus 93 n~l~VP~G~~Vr~~vTS~-DViHsf~IP~l---------gi----k~da~PG~~n~~~~~~-~kpG~y 145 (168)
T 3s8f_B 93 NPIEVPQGAEIVFKITSP-DVIHGFHVEGT---------NI----NVEVLPGEVSTVRYTF-KRPGEY 145 (168)
T ss_dssp SSEEEETTSEEEEEEECS-SSCEEEEETTS---------SC----EEEECTTBCEEEEEEC-CSCEEE
T ss_pred CEEEEeCCCeEEEEEecC-CceEEEEECCC---------Ce----EEEecCCceeEEEEEe-CCCEEE
Confidence 479999999999999997 44444333222 11 1234689988889988 689998
No 105
>1xwv_A DER F II; beta sheets, allergen; HET: PE3 XPE; 1.83A {Dermatophagoides farinae} SCOP: b.1.18.7 PDB: 1ahk_A 1ahm_A 1wrf_A 2f08_A* 1a9v_A 1ktj_A
Probab=82.88 E-value=7.1 Score=27.54 Aligned_cols=63 Identities=14% Similarity=0.203 Sum_probs=36.9
Q ss_pred CCceEEEecCCEEEEEEEecCC---CC--eeEEe--eccccCC-CCCCCCCccccCCccCCCCeEEEEEEeC
Q 043378 63 PGPRIVAREGDQLLIKVVKHVQ---NN--ISIHW--HGIGQLR-SGWADGPAYITQCPIQTGQGCVYNFTIV 126 (162)
Q Consensus 63 PGP~I~v~~Gd~v~v~v~N~l~---~~--~siH~--HGl~~~~-~~~~DG~~~vtq~~I~PG~~~tY~f~~~ 126 (162)
+.+.=.+++|..+.+.+.=..+ .. +.+|+ .|+..+- ....|+=- ...||+.+|+.++|.+..+
T Consensus 23 ~~~pC~l~rG~~~~i~~~f~~~~~~~~l~~~v~~~~~g~~ip~p~~~~daC~-~~~CPl~~G~~~~y~~~~~ 93 (129)
T 1xwv_A 23 GSDPCIIHRGKPFTLEALFDANQNTKTAKIEIKASLDGLEIDVPGIDTNACH-FMKCPLVKGQQYDAKYTWN 93 (129)
T ss_dssp BTSCEEEETTSEEEEEEEEECCSCBSCCEEEEEEEETTEEECCCSCCCBGGG-TSCSSBCTTCEEEEEEEEE
T ss_pred CCCCCEEeCCCeEEEEEEEECCCccceEEEEEEEEEcCEEeecCCCCCCccC-CccCcccCCEEEEEEEEeE
Confidence 3455677888888888772222 22 23332 3444432 11133321 2569999999999998773
No 106
>1nep_A EPV20, BNPC2, epididymal secretory protein E1; niemann-PICK C2, LDL, cholesterol, lipid bindin; HET: NAG; 1.70A {Bos taurus} SCOP: b.1.18.7 PDB: 2hka_A*
Probab=80.73 E-value=6.4 Score=27.77 Aligned_cols=63 Identities=17% Similarity=0.168 Sum_probs=36.6
Q ss_pred CceEEEecCCEEEEEEE---ecCCCCeeEEee----ccccCC-CCCCCCCccccCCccCCCCeEEEEEEeC
Q 043378 64 GPRIVAREGDQLLIKVV---KHVQNNISIHWH----GIGQLR-SGWADGPAYITQCPIQTGQGCVYNFTIV 126 (162)
Q Consensus 64 GP~I~v~~Gd~v~v~v~---N~l~~~~siH~H----Gl~~~~-~~~~DG~~~vtq~~I~PG~~~tY~f~~~ 126 (162)
.+.=.+++|..+.+.+. |..........| |+..+- ....|+=.....||+.+|+.++|.+.++
T Consensus 25 ~~PC~l~rG~~~~i~i~f~~~~~~~~~~~~v~~~~~gv~vp~~~~~~daC~~g~~CPl~~G~~~~y~~~lp 95 (130)
T 1nep_A 25 TQPCKLHRGQSYSVNVTFTSNTQSQSSKAVVHGIVMGIPVPFPIPESDGCKSGIRCPIEKDKTYNYVNKLP 95 (130)
T ss_dssp SSSEEEETTCEEEEEEEEEESSCBSCCEEEEEEEETTEEEECCCSCCBGGGTTCCSSBCTTCEEEEEEEEE
T ss_pred CCCCEEEcCCeEEEEEEEEcccccceEEEEEEEEECCEEeeccCCCCCcccCCCcCcccCCcEEEEEEEeE
Confidence 35667788888888877 222222223333 333321 1113432222469999999999998774
No 107
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=77.03 E-value=3.1 Score=29.80 Aligned_cols=46 Identities=15% Similarity=0.163 Sum_probs=26.9
Q ss_pred EEEEEecCCCCe---eEEeeccccCCCC-C--CCCCccccCCccCCCCeEEEE
Q 043378 76 LIKVVKHVQNNI---SIHWHGIGQLRSG-W--ADGPAYITQCPIQTGQGCVYN 122 (162)
Q Consensus 76 ~v~v~N~l~~~~---siH~HGl~~~~~~-~--~DG~~~vtq~~I~PG~~~tY~ 122 (162)
+|++.|..+.+. +=||.=....+.- . -+||-+ .|..|.||++|.|.
T Consensus 34 ~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG-~qP~L~PGe~f~Yt 85 (127)
T 2f1e_A 34 SIRIQNAGAVPARLVARHWQITDGNGRTEQVDGEGVVG-EQPWLRPGEAFHYT 85 (127)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTSCEEEEEESSBTT-BCCEECTTCEEEEE
T ss_pred EEEEEeCCCCCEEEEeceEEEEeCCCCEEEEECCCeec-CCCcCCCCCceEEe
Confidence 477788887765 4477643322110 0 234322 35567999999885
No 108
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=77.00 E-value=6.3 Score=32.68 Aligned_cols=16 Identities=13% Similarity=0.162 Sum_probs=13.5
Q ss_pred CccCCCCeEEEEEEeC
Q 043378 111 CPIQTGQGCVYNFTIV 126 (162)
Q Consensus 111 ~~I~PG~~~tY~f~~~ 126 (162)
..|+||++.+.+|.+.
T Consensus 95 ~~L~pG~Sve~~~dla 110 (343)
T 2x3c_A 95 QLLKAGQSLTVQAEVS 110 (343)
T ss_dssp EEECTTCEEEEEEECT
T ss_pred EEeCCCCeEEEEEehh
Confidence 3489999999999984
No 109
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=76.91 E-value=5.5 Score=27.26 Aligned_cols=54 Identities=9% Similarity=0.059 Sum_probs=34.7
Q ss_pred CEEEEEEEecCCCC---eeEEeeccccCCCCCCCCCccccCCccCCCCeEEEEEEe-CCCcccC
Q 043378 73 DQLLIKVVKHVQNN---ISIHWHGIGQLRSGWADGPAYITQCPIQTGQGCVYNFTI-VGQRGKL 132 (162)
Q Consensus 73 d~v~v~v~N~l~~~---~siH~HGl~~~~~~~~DG~~~vtq~~I~PG~~~tY~f~~-~~~~Gt~ 132 (162)
=.+.|+|+|-++.+ ..+|.-|.-.. ++ --.....|.||++..+++.. +.++|.-
T Consensus 22 l~v~vsf~NPL~~~L~~c~~~vEG~GL~-----~~-~~~~~~~v~pg~~~~~~~~~~P~~~G~~ 79 (102)
T 2xzz_A 22 CEVQIVFKNPLPVTLTNVVFRLEGSGLQ-----RP-KILNVGDIGGNETVTLRQSFVPVRPGPR 79 (102)
T ss_dssp EEEEEEEECCSSSCBCSEEEEEEETTTE-----EE-EEEEECCBCTTCEEEEEEEECCCSCSSC
T ss_pred EEEEEEEECCCCCcccCEEEEEECCCCC-----cc-eEEEcCcCCCCCEEEEEEEEecCcccce
Confidence 35778999999876 45565554321 11 11223568999999999887 4556653
No 110
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=75.17 E-value=3.1 Score=29.81 Aligned_cols=46 Identities=20% Similarity=0.222 Sum_probs=26.3
Q ss_pred EEEEEecCCCCe---eEEeeccccCCCC-C--CCCCccccCCccCCCCeEEEE
Q 043378 76 LIKVVKHVQNNI---SIHWHGIGQLRSG-W--ADGPAYITQCPIQTGQGCVYN 122 (162)
Q Consensus 76 ~v~v~N~l~~~~---siH~HGl~~~~~~-~--~DG~~~vtq~~I~PG~~~tY~ 122 (162)
+|++.|..+.+. +=||.=....+.- . -+|+-+ .|..|.||++|.|.
T Consensus 33 ~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG-~qP~L~PGe~f~Yt 84 (126)
T 1xvs_A 33 LITIKNLSSQTVQLMSRRWLITDADGKQTVVEGDGVVG-EQPRIKANDEYTYS 84 (126)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTCCEEEEEEESBTT-BCCEECTTCEEEEE
T ss_pred EEEEEECCCCCEEEEecEEEEEeCCCCEEEEECCceEc-CCCcCCCCCceEEe
Confidence 477778887764 4477633321110 0 133321 35567999999885
No 111
>2c34_A ICP, inhibitor of cysteine peptidases; chagasin, immunoglobulin fold; NMR {Leishmania mexicana} SCOP: b.1.26.1
Probab=68.94 E-value=15 Score=25.42 Aligned_cols=68 Identities=12% Similarity=-0.009 Sum_probs=38.5
Q ss_pred CceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCc----cc----cCCccCCCCeEEEEEEeCCCcccC
Q 043378 64 GPRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPA----YI----TQCPIQTGQGCVYNFTIVGQRGKL 132 (162)
Q Consensus 64 GP~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~----~v----tq~~I~PG~~~tY~f~~~~~~Gt~ 132 (162)
|-+|.++.||++.|.+.-+-....+=......-+..--.+|.. +. ....+..|+...+.|++ .++|+.
T Consensus 14 ~~~i~~~~Ge~~~I~L~~NPtTGY~W~~~~~~~~~~l~~~gl~~~s~y~~~~~~~~~vG~gG~~~~~f~a-~~~G~~ 89 (116)
T 2c34_A 14 DKWVDTHVGKTTEIHLKGNPTTGYMWTRVGFVGKDVLSDEILEVVCKYTPTPSSTPMVGVGGIYVVLVKP-RKRGHH 89 (116)
T ss_dssp CCCEEECSSCCEEEEEECCTTSSCEEEETTCTTSSCCCCSSEEEEEEEECCCCSSSSSCCCCEEEEEEEE-CSSSSE
T ss_pred CcEEEEcCCCEEEEEeCCCCCCCcEEEEecCCCcccccccccEEEEeEEeCCCCCCCcCCCceEEEEEEE-eCCceE
Confidence 4689999999999999966543333222211000000011111 11 01225568899999999 588986
No 112
>1xq4_A Protein APAG; all beta protein, structural genomics, protein structure initiative, PSI, northeast structural genomics consortium, NESG; 2.70A {Bordetella pertussis} SCOP: b.1.23.1
Probab=68.90 E-value=5.4 Score=29.04 Aligned_cols=46 Identities=15% Similarity=0.120 Sum_probs=26.2
Q ss_pred EEEEEecCCCCe---eEEeeccccCCCC-C--CCCCccccCCccCCCCeEEEE
Q 043378 76 LIKVVKHVQNNI---SIHWHGIGQLRSG-W--ADGPAYITQCPIQTGQGCVYN 122 (162)
Q Consensus 76 ~v~v~N~l~~~~---siH~HGl~~~~~~-~--~DG~~~vtq~~I~PG~~~tY~ 122 (162)
.|++.|..+.+. +=||.=....+.- . -+||-| .|..|.||++|.|.
T Consensus 38 ~ItI~N~~~~~vQL~sRhW~ItD~~G~~~eV~G~GVVG-eqPvL~PGe~F~Yt 89 (139)
T 1xq4_A 38 TVRITNTGSHPAQVISRHWIITDGEERVQEVRGLGVVG-QQPLLAPGETFEYT 89 (139)
T ss_dssp EEEEEECSSSCEEEEEEEEEEECTTSCEEEEEEESSSS-CCCEECTTCEEEEE
T ss_pred EEEEEeCCCCCEEEEecEEEEEeCCCCEEEEECCCeec-CCCcCCCCCceEEc
Confidence 477788887765 3477633221110 0 133321 35567999999885
No 113
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=66.89 E-value=30 Score=24.31 Aligned_cols=69 Identities=7% Similarity=0.116 Sum_probs=43.5
Q ss_pred eEEEEECCCCCCceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCccc---cCCccCCCCeEEEEEEeCC--
Q 043378 53 KSIVSVNGKFPGPRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPAYI---TQCPIQTGQGCVYNFTIVG-- 127 (162)
Q Consensus 53 ~~~~~~Ng~~PGP~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~~v---tq~~I~PG~~~tY~f~~~~-- 127 (162)
..+-..|-+--.=++....|.+..+.+.+.... ..| -|+||-... ....|+||++.+|+...++
T Consensus 22 ~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~---~Vw--------rwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~ 90 (120)
T 3isy_A 22 FNMSLKNQSERAIEFQFSTGQKFELVVYDSEHK---ERY--------RYSKEKMFTQAFQNLTLESGETYDFSDVWKEVP 90 (120)
T ss_dssp EEEEEEECSSSCEEEEESSSCCEEEEEECTTCC---EEE--------ETTTTCCCCCCCEEEEECTTCEEEEEEEESSCC
T ss_pred EEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCC---EEE--------EccccchhhhhhceEEECCCCEEEEEEEeCCCC
Confidence 334444544434477777777777777775432 222 256766432 2355899999999999863
Q ss_pred CcccC
Q 043378 128 QRGKL 132 (162)
Q Consensus 128 ~~Gt~ 132 (162)
.||+|
T Consensus 91 ~pG~Y 95 (120)
T 3isy_A 91 EPGTY 95 (120)
T ss_dssp CSEEE
T ss_pred CCccE
Confidence 47887
No 114
>1tza_A APAG protein, SOR45; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG, unknown function; 2.40A {Shewanella oneidensis} SCOP: b.1.23.1
Probab=66.79 E-value=4.9 Score=29.09 Aligned_cols=46 Identities=13% Similarity=0.130 Sum_probs=26.2
Q ss_pred EEEEEecCCCCe---eEEeeccccCCCC-C--CCCCccccCCccCCCCeEEEE
Q 043378 76 LIKVVKHVQNNI---SIHWHGIGQLRSG-W--ADGPAYITQCPIQTGQGCVYN 122 (162)
Q Consensus 76 ~v~v~N~l~~~~---siH~HGl~~~~~~-~--~DG~~~vtq~~I~PG~~~tY~ 122 (162)
+|++.|..+.+. +=||.=....+.- . -+||-| .|..|.||++|.|.
T Consensus 33 ~ItI~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG-eqP~L~PGe~F~Yt 84 (134)
T 1tza_A 33 TITIINLGEQAAKLETRHWIITDANGKTSEVQGAGVVG-ETPTIPPNTAYQYT 84 (134)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTSCEEEEEEESBTT-BCCEECTTEEEEEE
T ss_pred EEEEEeCCCCCEEEEecEEEEEeCCCCEEEEEcCceEc-CCCcCCCCCceEEc
Confidence 477788887764 3477633321110 0 133321 35567999998885
No 115
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=62.41 E-value=9.8 Score=29.45 Aligned_cols=53 Identities=15% Similarity=0.145 Sum_probs=35.3
Q ss_pred ceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCccccCCccCCCCeEEEEEEeCCCcccC
Q 043378 65 PRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPAYITQCPIQTGQGCVYNFTIVGQRGKL 132 (162)
Q Consensus 65 P~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~~vtq~~I~PG~~~tY~f~~~~~~Gt~ 132 (162)
..|++..|+.|++.+++. +.-|+...-.+.. +.-+-||..-...|.+ +++|+|
T Consensus 41 n~l~lP~g~~V~~~lTS~-DViHSF~IP~lgv-------------K~daiPGr~n~l~~~~-~~pG~y 93 (205)
T 1cyx_A 41 NEIAFPANTPVYFKVTSN-SVMHSFFIPRLGS-------------QIYAMAGMQTRLHLIA-NEPGTY 93 (205)
T ss_dssp SEEEEETTSCEEEEEEES-SSCEEEEEGGGTE-------------EEEECTTCCEEEEECC-SSSEEE
T ss_pred ceEEEeCCCEEEEEEecC-CceeeEEecccCc-------------EEEecCCceEEEEEEe-CCCeEE
Confidence 368999999999999987 3333333322211 1223577777778877 688888
No 116
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=61.32 E-value=13 Score=29.71 Aligned_cols=53 Identities=15% Similarity=0.146 Sum_probs=36.2
Q ss_pred ceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCccccCCccCCCCeEEEEEEeCCCcccC
Q 043378 65 PRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPAYITQCPIQTGQGCVYNFTIVGQRGKL 132 (162)
Q Consensus 65 P~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~~vtq~~I~PG~~~tY~f~~~~~~Gt~ 132 (162)
..+++..|+.|++.+++. +.-|+.....+... .| +-||..-...|.+ +++|+|
T Consensus 171 n~l~lP~g~~v~~~~tS~-DViHsf~ip~l~~k----~d---------a~PG~~n~~~~~~-~~~G~y 223 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGA-DVIHSWTVPAFGVK----QD---------AVPGRLAQLWFRA-EREGIF 223 (262)
T ss_dssp SCEEEETTSEEEEEEEES-SSCEEEEEGGGTEE----EE---------ECBTCCEEEEEEC-CSCEEE
T ss_pred ceEEEecCCEEEEEEEEC-cccceeeecccCce----EE---------ecCCceeEEEEec-CCcEEE
Confidence 469999999999999987 33333333322211 22 3477777778888 789998
No 117
>1lm8_V VHL, VON hippel-lindau disease tumor suppressor; regulation, tumor suppressor, oxygen sensing, transcription; 1.85A {Homo sapiens} SCOP: b.3.3.1 PDB: 1vcb_C 1lqb_C 3zrf_C 3zrc_C
Probab=60.54 E-value=18 Score=26.96 Aligned_cols=42 Identities=12% Similarity=0.196 Sum_probs=32.6
Q ss_pred cCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCccccCCccCCCCeEEE
Q 043378 71 EGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPAYITQCPIQTGQGCVY 121 (162)
Q Consensus 71 ~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~~vtq~~I~PG~~~tY 121 (162)
.+....|+|.|..+.+.-+.| +. .+|.+ +.+..++||+.+..
T Consensus 15 s~~~~~V~FvN~s~~~V~v~W--ID------y~G~~-v~Y~~L~PG~~~~q 56 (160)
T 1lm8_V 15 SREPSQVIFCNRSPRVVLPVW--LN------FDGEP-QPYPTLPPGTGRRI 56 (160)
T ss_dssp CCCEEEEEEEECSSSCEEEEE--EC------TTSCE-EECCCBCTTEEEEE
T ss_pred CCceEEEEEEeCCCCeEEEEE--EC------CCCCE-EEeeeeCCCCEEeC
Confidence 468899999999999999999 22 55654 34566899988753
No 118
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=57.68 E-value=23 Score=29.89 Aligned_cols=53 Identities=11% Similarity=0.276 Sum_probs=0.0
Q ss_pred EEEEEEEecCCCC--------eeEEeeccccCCCCCCCCCc-------ccc---CCccCCCCeEEEEEEeCCCc
Q 043378 74 QLLIKVVKHVQNN--------ISIHWHGIGQLRSGWADGPA-------YIT---QCPIQTGQGCVYNFTIVGQR 129 (162)
Q Consensus 74 ~v~v~v~N~l~~~--------~siH~HGl~~~~~~~~DG~~-------~vt---q~~I~PG~~~tY~f~~~~~~ 129 (162)
++.++++|+.+++ .++++---..... ..+-| +++ ..||+|||+.+.+..+ +.+
T Consensus 267 ~~~~~VtN~g~~pvrlgeF~tA~vrFln~~~~~~--~~~~P~~lla~~gL~vsd~~pI~PGETr~~~v~a-~da 337 (382)
T 1yew_A 267 RMKLTITNHGNSPIRLGEFYTASVRFLDSDVYKD--TTGYPEDLLAEDGLSVSDNSPLAPGETRTVDVTA-SDA 337 (382)
T ss_dssp EEEEEEEECSSSCEEEEEEECSSCEEECTTTCCC--CSCCCGGGEETTCEEESCCSCBCTTCEEEEEEEE-ECH
T ss_pred EEEEEEEcCCCCceEeeeEEeccEEEeCCccccc--CCCChHHhhccCCceeCCCCCcCCCceeEEEEEe-ehH
No 119
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=56.20 E-value=18 Score=29.47 Aligned_cols=53 Identities=17% Similarity=0.185 Sum_probs=36.4
Q ss_pred ceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCccccCCccCCCCeEEEEEEeCCCcccC
Q 043378 65 PRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPAYITQCPIQTGQGCVYNFTIVGQRGKL 132 (162)
Q Consensus 65 P~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~~vtq~~I~PG~~~tY~f~~~~~~Gt~ 132 (162)
..+++..|+.|++.+++.. .-|+.....+... .| +-||..-...|.+ +++|+|
T Consensus 189 N~lvlP~g~~V~~~ltS~D-ViHsf~iP~lg~k----~d---------aiPG~~n~~~~~~-~~~G~y 241 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTATD-VIHAWTIPAFAVK----QD---------AVPGRIAQLWFSV-DQEGVY 241 (298)
T ss_dssp SCEEEESSSEEEEEEEESS-SCEEEEEGGGTEE----EE---------ECTTCCEEEEEEC-SSSEEE
T ss_pred ceEEEEcCCEEEEEEEeCC-ccceeeEcccCce----EE---------ecCCceEEEEEEe-CCCEEE
Confidence 5799999999999999953 3333333222211 22 3478877888888 689999
No 120
>2h7w_A Chagasin; beta-strands, immunoglobulin-fold, hydrolase inhibitor; 1.70A {Trypanosoma cruzi} SCOP: b.1.26.1 PDB: 2nnr_A 2oul_B 3cbj_B 3cbk_B 3e1z_A 2fo8_A 2nqd_A*
Probab=55.80 E-value=52 Score=23.31 Aligned_cols=66 Identities=14% Similarity=0.232 Sum_probs=37.4
Q ss_pred CceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCc-----ccc--CCccCCCCeEEEEEEeCCCcccC
Q 043378 64 GPRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPA-----YIT--QCPIQTGQGCVYNFTIVGQRGKL 132 (162)
Q Consensus 64 GP~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~-----~vt--q~~I~PG~~~tY~f~~~~~~Gt~ 132 (162)
|-+|.++.||++.|.|.-+-.... .|.=.......-.|+.- +.. ...+..|+...+.|++ .++|+.
T Consensus 32 ~~~I~v~~Ge~~~I~L~~NPTTGY--~W~~~~~~~~~L~~~~~~v~~~y~p~~~~~vGagG~~~w~f~A-~~~G~~ 104 (131)
T 2h7w_A 32 GATLTVAVGELVEIQLPSNPTTGF--AWYFEGGTKESPNESMFTVENKYFPPDSKLLGAGGTEHFHVTV-KAAGTH 104 (131)
T ss_dssp TCEEEECTTCEEEEEEEECGGGSC--EEEBTTTBSSCSCTTTEEEEEEEECCTTCCTTCCEEEEEEEEE-CSSEEE
T ss_pred CCEEEEeCCCEEEEEeCCCCCCCe--EEEEecCCCccccccceeecceeeeCCCCCcCCCcEEEEEEEE-ccCceE
Confidence 569999999999999986643222 22211100000012110 000 1234567889999999 588987
No 121
>4ajy_V VON hippel-lindau disease tumor suppressor; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 3zrc_C 3zrf_C* 3ztc_C* 3zun_C 4awj_C* 1lqb_C 3ztd_C* 4b95_C* 1lm8_V 1vcb_C 4b9k_C*
Probab=55.59 E-value=21 Score=26.66 Aligned_cols=51 Identities=14% Similarity=0.198 Sum_probs=35.7
Q ss_pred CCCceEE-EecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCccccCCccCCCCeEEE
Q 043378 62 FPGPRIV-AREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPAYITQCPIQTGQGCVY 121 (162)
Q Consensus 62 ~PGP~I~-v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~~vtq~~I~PG~~~tY 121 (162)
-+.|.++ .+.+..+.|+|.|..+.+.-+-|=. .+|.+ +.+..+.||+++..
T Consensus 8 ~~~p~lRS~~S~~~~~V~FvN~s~~~V~v~WID--------y~G~~-~~Y~tL~PG~~~~~ 59 (163)
T 4ajy_V 8 RPRPVLRSVNSREPSQVIFCNRSPRVVLPVWLN--------FDGEP-QPYPTLPPGTGRRI 59 (163)
T ss_dssp --CCSSCCCCCCCEEEEEEEECSSSCEEEEEEC--------TTSCE-EECCCBCTTEEEEE
T ss_pred cCCCcccCCCCCceEEEEEEeCCCCeEEEEEEC--------CCCCE-EEeeeeCCCCeEEe
Confidence 3444443 3457899999999999999999942 55553 34567899988754
No 122
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=51.52 E-value=17 Score=28.27 Aligned_cols=53 Identities=15% Similarity=0.065 Sum_probs=35.9
Q ss_pred ceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCccccCCccCCCCeEEEEEEeCCCcccC
Q 043378 65 PRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPAYITQCPIQTGQGCVYNFTIVGQRGKL 132 (162)
Q Consensus 65 P~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~~vtq~~I~PG~~~tY~f~~~~~~Gt~ 132 (162)
..+++..|+.|++.++.. +.-|+.....+..+ .|. -||..-...|.+ +++|+|
T Consensus 140 n~lvlP~~~~Vr~~vtS~-DViHsf~vP~lg~K----~Da---------iPGr~n~~~~~~-~~~G~y 192 (227)
T 1v54_B 140 NRVVLPMEMTIRMLVSSE-DVLHSWAVPSLGLK----TDA---------IPGRLNQTTLMS-SRPGLY 192 (227)
T ss_dssp SCEEEETTSCEEEEEEES-SSCEEEEEGGGTEE----EEE---------CTTCCEEEEECC-SSCEEE
T ss_pred ceEEEecCCEEEEEEEeC-cccceeeecccCcE----EEe---------cCCceEEEEEec-CCcEEE
Confidence 579999999999999985 33344433333221 343 467777777777 688888
No 123
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=50.36 E-value=36 Score=29.03 Aligned_cols=53 Identities=13% Similarity=0.171 Sum_probs=0.0
Q ss_pred EEEEEEEecCCCC--------eeEEeeccccCCCC--CCC------CCccccCCccCCCCeEEEEEEeCCCc
Q 043378 74 QLLIKVVKHVQNN--------ISIHWHGIGQLRSG--WAD------GPAYITQCPIQTGQGCVYNFTIVGQR 129 (162)
Q Consensus 74 ~v~v~v~N~l~~~--------~siH~HGl~~~~~~--~~D------G~~~vtq~~I~PG~~~tY~f~~~~~~ 129 (162)
++.++++|+.+++ .++++---...... +.| |.- -.. ||+|||+++.+..+ +.+
T Consensus 301 ~~~~~VtN~g~~pvrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~GL~-s~~-pI~PGETrt~~V~a-~da 369 (419)
T 3rfr_A 301 TINVKVKNGTSQPVRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRGLS-NDD-VIAPGESKEIVVKI-QDA 369 (419)
T ss_dssp EEEEEEECCSSSCBEEEEEECSSCEEECTTTCSSCCCCCTTTEESCCCC-CCC-CBCTTCEEEEEEEE-ECH
T ss_pred EEEEEEecCCCCceEEeeEEEccEEEeCcccccCCCCCchhhhhccCCC-CCC-CcCCCcceEEEEEe-ehH
No 124
>2cio_B Inhibitor of cysteine peptidase; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Trypanosoma brucei}
Probab=44.86 E-value=75 Score=21.98 Aligned_cols=66 Identities=14% Similarity=0.157 Sum_probs=36.5
Q ss_pred CceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCC-----cccc---CC--------ccCCCCeEEEEEEeCC
Q 043378 64 GPRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGP-----AYIT---QC--------PIQTGQGCVYNFTIVG 127 (162)
Q Consensus 64 GP~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~-----~~vt---q~--------~I~PG~~~tY~f~~~~ 127 (162)
+-+|.++.||++.|.+.-+-....+=...+..... -.||. .+.. .. .+..|+...+.|++ .
T Consensus 12 ~~ti~l~~Ge~~~I~L~~NPtTGY~W~~~~~~~~~--l~~~~~~v~~~y~~~~~~~~~~~~~~~~vG~gG~~~~~fka-~ 88 (121)
T 2cio_B 12 NKTIRMVIGETFTIELESNPTTGYTWLRSGLAGTE--LSDCTFAIQSKFNNRAPHDNHKNHRRLLVGAGGTMVLEVKA-L 88 (121)
T ss_pred CcEEEEcCCCEEEEEeCCCCCCCeEEEEecCcccc--CCCccEEEeeeEEcCCCCcccccccccEeCCCceEEEEEEE-e
Confidence 34799999999999987554333322222210000 01110 0000 00 35567889999999 6
Q ss_pred CcccC
Q 043378 128 QRGKL 132 (162)
Q Consensus 128 ~~Gt~ 132 (162)
++|+.
T Consensus 89 ~~G~~ 93 (121)
T 2cio_B 89 KAGKH 93 (121)
T ss_pred cCceE
Confidence 89987
No 125
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=44.17 E-value=31 Score=24.76 Aligned_cols=25 Identities=20% Similarity=0.428 Sum_probs=10.8
Q ss_pred EEEecCCEEEEEEEecCCCCeeEEe
Q 043378 67 IVAREGDQLLIKVVKHVQNNISIHW 91 (162)
Q Consensus 67 I~v~~Gd~v~v~v~N~l~~~~siH~ 91 (162)
+.+.+|+.|.+.-.-.......+.|
T Consensus 34 ~~v~~G~~v~L~C~~~~~~~~~v~W 58 (237)
T 3sob_L 34 LSASVGDRVTITCRASQDVSTAVAW 58 (237)
T ss_dssp EEEETTCCEEEEEEESSCCTTCEEE
T ss_pred EEEeCCCcEEEEEecCCCCCceEEE
Confidence 4444444444444443333334444
No 126
>2wnv_C C1Q chain C, complement C1Q subcomponent subunit C; immune system, secreted, collagen, recognition, disulfide bond, innate immunity; HET: NAG; 1.25A {Homo sapiens} PDB: 2jg8_C 2wnu_C* 2jg9_C* 1pk6_C
Probab=40.13 E-value=21 Score=24.99 Aligned_cols=17 Identities=12% Similarity=0.225 Sum_probs=14.7
Q ss_pred ceEEEecCCEEEEEEEe
Q 043378 65 PRIVAREGDQLLIKVVK 81 (162)
Q Consensus 65 P~I~v~~Gd~v~v~v~N 81 (162)
-++.+++||+|.|.+..
T Consensus 93 ~~L~L~~GD~V~v~~~~ 109 (131)
T 2wnv_C 93 VLLRLQVGEEVWLAVND 109 (131)
T ss_dssp EEEEECTTCEEEEEEEE
T ss_pred EEEEECCCCEEEEEEeC
Confidence 38899999999999853
No 127
>2wnv_A C1Q chain A, complement C1Q subcomponent subunit A; immune system, secreted, collagen, recognition, disulfide bond, innate immunity; HET: NAG; 1.25A {Homo sapiens} PDB: 2jg8_A 2wnu_A* 2jg9_A* 1pk6_A
Probab=39.85 E-value=23 Score=24.84 Aligned_cols=17 Identities=18% Similarity=0.259 Sum_probs=15.0
Q ss_pred ceEEEecCCEEEEEEEe
Q 043378 65 PRIVAREGDQLLIKVVK 81 (162)
Q Consensus 65 P~I~v~~Gd~v~v~v~N 81 (162)
-++.+++||+|.|.+..
T Consensus 94 ~~L~L~~GD~V~l~~~~ 110 (134)
T 2wnv_A 94 MVLQLQQGDQVWVEKDP 110 (134)
T ss_dssp EEEEECTTCEEEEEEEE
T ss_pred EEEEECCCCEEEEEEeC
Confidence 48899999999999964
No 128
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=39.77 E-value=53 Score=22.22 Aligned_cols=60 Identities=10% Similarity=0.040 Sum_probs=38.8
Q ss_pred eEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCccccCCccCCCCeEEEEEEe-CCCcccC
Q 043378 66 RIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPAYITQCPIQTGQGCVYNFTI-VGQRGKL 132 (162)
Q Consensus 66 ~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~~vtq~~I~PG~~~tY~f~~-~~~~Gt~ 132 (162)
...+..-.+..+.++|....+...+|+-... .+=.| +...++||++...+..- +.++|.|
T Consensus 36 ~~~v~~~~~~~~~l~N~g~~~~~f~~~~~~~-----F~i~P--~~g~L~pg~~~~i~V~F~P~~~g~~ 96 (122)
T 2ys4_A 36 TCPVKYSTQKILLVRNIGNKNAVFHIKTCRP-----FSIEP--AIGTLNVGESMQLEVEFEPQSVGDH 96 (122)
T ss_dssp SEESSSCEEEEEEEECCSSSCEEEEEECCTT-----EEEES--SEEEECTTCEEEEEEEECCSSSBCC
T ss_pred CeecCCeEEEEEEEEECCCCCEEEEEecCCC-----eEEEC--CcCEECCCCEEEEEEEEEcCCCccE
Confidence 3445555677899999999999999984211 00001 23457899988776554 3578877
No 129
>2kut_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Geobacter metallireducens}
Probab=39.04 E-value=95 Score=21.72 Aligned_cols=61 Identities=10% Similarity=0.047 Sum_probs=32.8
Q ss_pred ecCCEE--EEEEEecCCCCeeEEeeccccCCC-CCCCCCcccc--CCccCCCCeEE--EEEEeCCCc------ccC
Q 043378 70 REGDQL--LIKVVKHVQNNISIHWHGIGQLRS-GWADGPAYIT--QCPIQTGQGCV--YNFTIVGQR------GKL 132 (162)
Q Consensus 70 ~~Gd~v--~v~v~N~l~~~~siH~HGl~~~~~-~~~DG~~~vt--q~~I~PG~~~t--Y~f~~~~~~------Gt~ 132 (162)
.+||.+ .++|+|.......- |.+.+.-. +-.-|...-+ -..|++|++.+ +.|.+...+ |+|
T Consensus 13 ~~g~~vTvsatVkN~Gt~~s~a--~~V~~yl~~p~~gg~~vgt~tv~~LaaG~s~t~~v~~~~~~~~~~~a~~Gsy 86 (122)
T 2kut_A 13 FEGEEITVSARVTNRGAAEAHN--VPVAVYLGNPAQGGVEIGRDTISRIPVGGTGLARVQWKATRKLAGRAANPGV 86 (122)
T ss_dssp CTTCEEEEEEEEECCSSSCBCC--CCEEECSSCTTTCCCCCBCCCCSCBCTTCEEECCEEEECCCCCSSCCSCCCC
T ss_pred CCCCeEEEEEEEEeCCCcccCc--EEEEEEeCCCccCCeEEeeEEccccCCCCeEEEEEEEecCCcccccccCceE
Confidence 456655 67889998664432 33333211 0011122111 14689999999 777764333 777
No 130
>2wnv_B C1Q chain B, complement C1Q subcomponent subunit B; immune system, secreted, collagen, recognition, disulfide bond, innate immunity; HET: NAG; 1.25A {Homo sapiens} PDB: 2jg8_B 2wnu_B* 2jg9_B* 1pk6_B
Probab=38.21 E-value=23 Score=24.95 Aligned_cols=17 Identities=6% Similarity=0.321 Sum_probs=14.9
Q ss_pred ceEEEecCCEEEEEEEe
Q 043378 65 PRIVAREGDQLLIKVVK 81 (162)
Q Consensus 65 P~I~v~~Gd~v~v~v~N 81 (162)
-++.+++||+|.|.+..
T Consensus 95 ~~L~L~~GD~V~v~~~~ 111 (136)
T 2wnv_B 95 MVLKLEQGENVFLQATD 111 (136)
T ss_dssp EEEEECTTCEEEEEEEE
T ss_pred EEEEECCCCEEEEEEeC
Confidence 48899999999999863
No 131
>3es6_B Prolactin-inducible protein; major histocompatibility complex, protein-protein complex, P inducible protein, zinc 2-glycoprotein, ZAG-PIP complex; HET: NDG NAG BMA MAN P6G; 3.23A {Homo sapiens} SCOP: b.1.18.23
Probab=37.77 E-value=80 Score=21.89 Aligned_cols=61 Identities=10% Similarity=0.072 Sum_probs=38.2
Q ss_pred EEecCCEE--EEEEEecCCCCeeEEeeccccCCCCCCCCCccccC-CccCCCCeEEEEEEeCCCcccC
Q 043378 68 VAREGDQL--LIKVVKHVQNNISIHWHGIGQLRSGWADGPAYITQ-CPIQTGQGCVYNFTIVGQRGKL 132 (162)
Q Consensus 68 ~v~~Gd~v--~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~~vtq-~~I~PG~~~tY~f~~~~~~Gt~ 132 (162)
.+.+|+.+ .++|.|.+++...+...=. .+.+.++.+...+ .-|.++++.+|.|.+ ..-|..
T Consensus 17 sv~rgE~~~~~~~V~nyl~~~~~v~v~L~---~s~~~~~~~~~~~t~Clc~~~~~t~~W~i-~~lg~v 80 (118)
T 3es6_B 17 SVRPNDEVTAVLAVQTELKECMVVKTYLI---SSIPLQGAFNYKYTACLCDDNPKTFYWDF-YTNRTV 80 (118)
T ss_dssp EECSSCCEEEEEEEEECCSSCEEEEEEEE---ESSCCCSGGGCEEEEEECSSSCEEEEEEE-CCSSCE
T ss_pred eEecCCEEEEEEEEEecccceEEEEEEec---CCcCEEccCCCcccEEecCCCceEEEEEE-EeCCeE
Confidence 45677765 4578899988776665421 2223565554221 127889999999998 445543
No 132
>2wtp_A ORF131 protein, CZCE; metal binding protein, heavy metal, copper binding; HET: TRS; 1.50A {Ralstonia metallidurans CH34} PDB: 2wto_A*
Probab=36.74 E-value=14 Score=26.58 Aligned_cols=17 Identities=6% Similarity=0.223 Sum_probs=16.0
Q ss_pred eEEEecCCEEEEEEEec
Q 043378 66 RIVAREGDQLLIKVVKH 82 (162)
Q Consensus 66 ~I~v~~Gd~v~v~v~N~ 82 (162)
.|.|+.|++|++.+.|+
T Consensus 72 ~InV~~GETVrF~v~nk 88 (131)
T 2wtp_A 72 YVNVDSGETVAFRAGEK 88 (131)
T ss_dssp EEEEETTCEEEEEETTE
T ss_pred EEEecCCCEEEEEeCCc
Confidence 49999999999999998
No 133
>3rpf_C Molybdopterin converting factor, subunit 1 (MOAD); MCSG, PSI-biology, structural genomics, midwest center for S genomics, transferase; 1.90A {Helicobacter pylori}
Probab=35.21 E-value=14 Score=23.07 Aligned_cols=24 Identities=13% Similarity=0.343 Sum_probs=20.0
Q ss_pred EEEEECCCC-CCceEEEecCCEEEE
Q 043378 54 SIVSVNGKF-PGPRIVAREGDQLLI 77 (162)
Q Consensus 54 ~~~~~Ng~~-PGP~I~v~~Gd~v~v 77 (162)
-.+.+||.+ +++.-.++.||+|.|
T Consensus 43 ~~vavN~~~v~~~~~~l~~gDeV~i 67 (74)
T 3rpf_C 43 CAIALNDHLIDNLNTPLKDGDVISL 67 (74)
T ss_dssp CEEEESSSEECCTTCCCCTTCEEEE
T ss_pred cEEEECCEEcCCCCcCCCCCCEEEE
Confidence 467889998 887778999999877
No 134
>1vjj_A Protein-glutamine glutamyltransferase E; transglutaminase 3, X-RAY crystallography, metalloenzyme, calcium ION; HET: GDP; 1.90A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1sgx_A* 1l9m_A 1l9n_A* 1nud_A 1nuf_A 1nug_A 1rle_A*
Probab=33.94 E-value=93 Score=28.28 Aligned_cols=54 Identities=15% Similarity=0.162 Sum_probs=35.2
Q ss_pred EEEEEEEecCCCC---eeEEeeccccCCCCCCCCCccccCCccCCCCeEEEEEEe-CCCcccC
Q 043378 74 QLLIKVVKHVQNN---ISIHWHGIGQLRSGWADGPAYITQCPIQTGQGCVYNFTI-VGQRGKL 132 (162)
Q Consensus 74 ~v~v~v~N~l~~~---~siH~HGl~~~~~~~~DG~~~vtq~~I~PG~~~tY~f~~-~~~~Gt~ 132 (162)
.+.|+|+|-|+.+ ..++.-|.-.. .+.--+....|.||++..+++.. +.++|.-
T Consensus 611 ~v~v~f~NPL~~~L~~c~~~vEG~GL~-----~~~~~~~~~~v~pg~~~~~~~~~~P~~~G~r 668 (692)
T 1vjj_A 611 NVQMLFSNPLDEPVRDCVLMVEGSGLL-----LGNLKIDVPTLGPKERSRVRFDILPSRSGTK 668 (692)
T ss_dssp EEEEEEECCSSSCBCSEEEEEECTTTS-----SSCEEEEECCBCTTCEEEEEEEECCCSCEEE
T ss_pred EEEEEEECCCCCcccceEEEEECCCCC-----CCceEEEcCccCCCCEEEEEEEEEeccccce
Confidence 4578899999876 45666665332 12111223568999999999887 4557753
No 135
>2kyw_A Adhesion exoprotein; structural genomics, northeast structural genomics consortiu GFT, PSI-2, protein structure initiative; NMR {Pediococcus pentosaceus}
Probab=33.66 E-value=30 Score=22.67 Aligned_cols=29 Identities=28% Similarity=0.568 Sum_probs=21.6
Q ss_pred EEecCCEEEEEEEecCCCCeeEEe-ecccc
Q 043378 68 VAREGDQLLIKVVKHVQNNISIHW-HGIGQ 96 (162)
Q Consensus 68 ~v~~Gd~v~v~v~N~l~~~~siH~-HGl~~ 96 (162)
....|.+|.|+|.-....+..||. ||+..
T Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (87)
T 2kyw_A 53 VSSDGKTVTITFAADDSDNVVIHLKHGLEH 82 (87)
T ss_dssp ECTTSSEEEEECCSSSCCCEEEEEEECCCC
T ss_pred EecCCCEEEEEEeecCCCCEEEEeecCccc
Confidence 345678888888888888888886 66643
No 136
>2hj1_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; 2.10A {Haemophilus influenzae} SCOP: d.15.3.4
Probab=33.56 E-value=14 Score=25.07 Aligned_cols=24 Identities=21% Similarity=0.237 Sum_probs=20.5
Q ss_pred EEEEECCCCCCceEEEecCCEEEE
Q 043378 54 SIVSVNGKFPGPRIVAREGDQLLI 77 (162)
Q Consensus 54 ~~~~~Ng~~PGP~I~v~~Gd~v~v 77 (162)
....+||+.-.+.-.++.||+|+|
T Consensus 59 ~~V~Vng~~v~~d~~L~dGDRVEI 82 (97)
T 2hj1_A 59 NKIGIFSRPIKLTDVLKEGDRIEI 82 (97)
T ss_dssp SEEEEEECSCCTTCBCCTTCEEEE
T ss_pred cEEEEcCEECCCCccCCCCCEEEE
Confidence 468889987778888999999998
No 137
>2q3z_A Transglutaminase 2; transglutaminase 2, tissue transglutaminase, TG2, transferas; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1kv3_A 3ly6_A*
Probab=32.79 E-value=1.1e+02 Score=27.87 Aligned_cols=54 Identities=9% Similarity=0.142 Sum_probs=35.1
Q ss_pred EEEEEEEecCCCC---eeEEeeccccCCCCCCCCCccccC-CccCCCCeEEEEEEe-CCCcccC
Q 043378 74 QLLIKVVKHVQNN---ISIHWHGIGQLRSGWADGPAYITQ-CPIQTGQGCVYNFTI-VGQRGKL 132 (162)
Q Consensus 74 ~v~v~v~N~l~~~---~siH~HGl~~~~~~~~DG~~~vtq-~~I~PG~~~tY~f~~-~~~~Gt~ 132 (162)
.+.|+|+|-|+.+ ..++.-|.-. ..+.--+.. ..|.||++.++++.. +.++|.-
T Consensus 604 ~v~v~f~NPL~~~L~~c~~~vEG~GL-----~~~~~~~~~~~~v~pg~~~~~~~~~~P~~~G~~ 662 (687)
T 2q3z_A 604 VAEVSLQNPLPVALEGCTFTVEGAGL-----TEEQKTVEIPDPVEAGEEVKVRMDLVPLHMGLH 662 (687)
T ss_dssp EEEEEEECCSSSCBCSEEEEEECTTT-----CSSCEEEEECSCBCTTCEEEEEEEECCCSSSCE
T ss_pred EEEEEEECCCCCcccceEEEEECCCC-----CCCceEEecCCCcCCCCEEEEEEEEEeccccce
Confidence 3588899999876 4567666543 222111222 468999999999887 4556753
No 138
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=32.03 E-value=48 Score=23.62 Aligned_cols=27 Identities=26% Similarity=0.425 Sum_probs=21.8
Q ss_pred eEEEecC-CEEEEEEEecCCCCeeE--Eee
Q 043378 66 RIVAREG-DQLLIKVVKHVQNNISI--HWH 92 (162)
Q Consensus 66 ~I~v~~G-d~v~v~v~N~l~~~~si--H~H 92 (162)
.|.+++| ++++++|+|..+.|.-+ |+|
T Consensus 18 ~I~lN~gr~~~~l~V~NtGDRPIQVGSHyH 47 (126)
T 4ubp_B 18 EIEINAGREKTTIRVSNTGDRPIQVGSHIH 47 (126)
T ss_dssp EEETTTTSCEEEEEEEECSSSCEEEETTSC
T ss_pred CEEeCCCCcEEEEEEEeCCCCCEEEccccc
Confidence 4677777 68999999999998766 555
No 139
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=32.03 E-value=48 Score=23.62 Aligned_cols=27 Identities=26% Similarity=0.425 Sum_probs=21.8
Q ss_pred eEEEecC-CEEEEEEEecCCCCeeE--Eee
Q 043378 66 RIVAREG-DQLLIKVVKHVQNNISI--HWH 92 (162)
Q Consensus 66 ~I~v~~G-d~v~v~v~N~l~~~~si--H~H 92 (162)
.|.+++| ++++++|+|..+.|.-+ |+|
T Consensus 18 ~I~lN~gr~~~~l~V~NtGDRPIQVGSHyH 47 (126)
T 4ac7_B 18 EIEINAGREKTTIRVSNTGDRPIQVGSHIH 47 (126)
T ss_dssp EEETTTTSCEEEEEEEECSSSCEEEETTSC
T ss_pred CEEeCCCCcEEEEEEEeCCCCCEEEccccc
Confidence 4677777 68999999999998766 555
No 140
>2wgn_B Inhibitor of cysteine peptidase compnd 3; hydrolase inhibitor, dynamics, peptidase inhibitor, cathepsi hydrolase inhibitor; NMR {Pseudomonas aeruginosa}
Probab=29.08 E-value=1.5e+02 Score=20.81 Aligned_cols=72 Identities=8% Similarity=0.225 Sum_probs=40.4
Q ss_pred ECCCCCCceEEEecCCEEEEEEEecCCCCeeEEeec-----cccCCCC-CCCCCccccCCccCCCCeEEEEEEeCCCccc
Q 043378 58 VNGKFPGPRIVAREGDQLLIKVVKHVQNNISIHWHG-----IGQLRSG-WADGPAYITQCPIQTGQGCVYNFTIVGQRGK 131 (162)
Q Consensus 58 ~Ng~~PGP~I~v~~Gd~v~v~v~N~l~~~~siH~HG-----l~~~~~~-~~DG~~~vtq~~I~PG~~~tY~f~~~~~~Gt 131 (162)
+...--|-+|.++.||++.|+|.-+-....+-.... +...... +.+. + .....+..|+...+.|++ .++|+
T Consensus 28 ~~~~~~g~tI~v~~Ge~~~I~L~~NPTTGY~W~~~~~~~~vl~~l~~~~y~~~-~-~~~~~vGagG~~~w~f~A-~~~G~ 104 (132)
T 2wgn_B 28 LDDADDCSPLKLTQGQELVLTLPSNPTTGFRWELRNPAASVLKRLGPEVYSNS-E-EDSGLVGSGGESTWRFRV-AASGD 104 (132)
T ss_dssp CCCSSCCSCEEECTTCEEEEEECCCTTTSCEEEEEECCTTTEEECCSCCSCSS-C-SSCCCSSSSCCEEEEEEE-CSCEE
T ss_pred EecccCCcEEEEcCCCEEEEEeCCCCCCCeEEEEecCCCceEEecccceecCC-C-CccCCcCCCceEEEEEEE-cCCce
Confidence 344455778999999999999986543322221111 1101000 0110 0 011235567889999999 68998
Q ss_pred C
Q 043378 132 L 132 (162)
Q Consensus 132 ~ 132 (162)
.
T Consensus 105 ~ 105 (132)
T 2wgn_B 105 D 105 (132)
T ss_dssp E
T ss_pred E
Confidence 7
No 141
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=27.99 E-value=71 Score=25.32 Aligned_cols=49 Identities=20% Similarity=0.335 Sum_probs=29.2
Q ss_pred ceEEEecCCEEEEEEEecCCC------CeeEEeeccccCCCCCCCCCccccCCccCCCCeEE
Q 043378 65 PRIVAREGDQLLIKVVKHVQN------NISIHWHGIGQLRSGWADGPAYITQCPIQTGQGCV 120 (162)
Q Consensus 65 P~I~v~~Gd~v~v~v~N~l~~------~~siH~HGl~~~~~~~~DG~~~vtq~~I~PG~~~t 120 (162)
-+|+.|-|-++.|.+.|..+. +.++..-|...... .-++..+.||+++|
T Consensus 129 EdiinRgGG~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~-------aG~~i~L~PGESiT 183 (246)
T 3kmh_A 129 EDIINRGGGNLIVELWNADSNEQTADSDITVVIDGCRQKHT-------AGSQLRLSPGESIC 183 (246)
T ss_dssp EEEEEEEESCEEEEEEEBCTTSSBCCSCEEEEETTEEEEEC-------TTCEEEECTTCEEE
T ss_pred ccEEecCCCeEEEEEEecCCCccccCCCeEEecCCeEEEeC-------CCCEEEECCCCeEe
Confidence 477777777788888887532 45555555543221 11223467888876
No 142
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=27.82 E-value=39 Score=27.62 Aligned_cols=53 Identities=13% Similarity=0.118 Sum_probs=35.3
Q ss_pred ceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCccccCCccCCCCeEEEEEEeCCCcccC
Q 043378 65 PRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPAYITQCPIQTGQGCVYNFTIVGQRGKL 132 (162)
Q Consensus 65 P~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~~vtq~~I~PG~~~tY~f~~~~~~Gt~ 132 (162)
..|++..|..|++.++.. +.-|+.....+... .| +-||..-...|.+ +++|+|
T Consensus 151 n~l~lP~g~~V~~~lTS~-DViHsf~IP~lg~k----~D---------aiPGr~n~~~~~~-~~~G~y 203 (315)
T 1fft_B 151 NEIAFPANTPVYFKVTSN-SVMNSFFIPRLGSQ----IY---------AMAGMQTRLHLIA-NEPGTY 203 (315)
T ss_dssp SBCCCCSSSEEEEEECBS-SSCEEEEEGGGTEE----EE---------ECBTSCEEEEEEC-CSCBCC
T ss_pred ceEEEeCCCEEEEEEEeC-CccceeeecccCcE----Ee---------ecCCcceeeEEec-CCCeEE
Confidence 368889999999999876 33333333322221 23 3477777778888 789999
No 143
>1z65_A PRPLP, prion-like protein doppel, doppelganger; transmembrane helix, DHPC, mouse doppel, unknown function; NMR {Synthetic}
Probab=27.26 E-value=14 Score=19.80 Aligned_cols=21 Identities=10% Similarity=0.044 Sum_probs=13.6
Q ss_pred hhHHHHHHHHHHHhhcccccc
Q 043378 12 GLKGILCSFIALCLLAEPAFG 32 (162)
Q Consensus 12 ~~~~~~~~~~~~~l~~~~a~~ 32 (162)
.+...++..+..+|+|+++..
T Consensus 4 hLG~~wlai~c~LLfs~Ls~v 24 (30)
T 1z65_A 4 RLGTWWVAILCMLLASHLSTV 24 (30)
T ss_dssp SCSSHHHHHHHHHHHHHTTTT
T ss_pred hhhhhHHHHHHHHHHhhHHHH
Confidence 344556677777787777643
No 144
>3bj9_1 Immunoglobulin IOTA chain, immunoglobulin lambda- like polypeptide 1; immunoglobulin domain, beta sheet, polymorphism, immune system; 2.00A {Homo sapiens} PDB: 2h3n_A
Probab=26.33 E-value=71 Score=20.51 Aligned_cols=27 Identities=15% Similarity=0.351 Sum_probs=20.6
Q ss_pred ceEEEecCCEEEEEEEecCC---CCeeEEe
Q 043378 65 PRIVAREGDQLLIKVVKHVQ---NNISIHW 91 (162)
Q Consensus 65 P~I~v~~Gd~v~v~v~N~l~---~~~siH~ 91 (162)
|.+.+.+|+.|.+.=.-... ....++|
T Consensus 6 ~~~~~~~G~~v~L~C~~~~~~~~~~~~v~W 35 (116)
T 3bj9_1 6 PAMSSALGTTIRLTCTLRNDHDIGVYSVYW 35 (116)
T ss_dssp SEEEEETTCCEEEEEEECSSSCGGGCCEEE
T ss_pred CcEEEcCCCcEEEEEEeecCccCCCceEEE
Confidence 46899999999998775533 3467899
No 145
>1gr3_A Collagen X; extracellular matrix, connective tissue; HET: CPS; 2.0A {Homo sapiens} SCOP: b.22.1.1
Probab=25.94 E-value=34 Score=24.94 Aligned_cols=18 Identities=22% Similarity=0.291 Sum_probs=15.4
Q ss_pred CceEEEecCCEEEEEEEe
Q 043378 64 GPRIVAREGDQLLIKVVK 81 (162)
Q Consensus 64 GP~I~v~~Gd~v~v~v~N 81 (162)
.-+|.+++||+|.|.+..
T Consensus 119 s~vL~L~~GD~Vwv~~~~ 136 (160)
T 1gr3_A 119 SAIIDLTENDQVWLQLPN 136 (160)
T ss_dssp EEEEEECTTCEEEEECCC
T ss_pred EEEEEECCCCEEEEEEec
Confidence 348999999999999864
No 146
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=25.33 E-value=1.1e+02 Score=22.43 Aligned_cols=30 Identities=7% Similarity=0.226 Sum_probs=24.4
Q ss_pred CCceEEEecCCEEEE------EEEecCCCCeeEEee
Q 043378 63 PGPRIVAREGDQLLI------KVVKHVQNNISIHWH 92 (162)
Q Consensus 63 PGP~I~v~~Gd~v~v------~v~N~l~~~~siH~H 92 (162)
-|-..++++||.+.| +++|..+.+.-+||-
T Consensus 126 ~g~~~~L~~Gds~~iP~g~~H~~~N~~d~~Arll~V 161 (166)
T 2vpv_A 126 CKNKFLSVKGSTFQIPAFNEYAIANRGNDEAKMFFV 161 (166)
T ss_dssp TTEEEEEETTCEEEECTTCEEEEEECSSSCEEEEEE
T ss_pred CCEEEEEcCCCEEEECCCCCEEEEECCCCCEEEEEE
Confidence 356888889998887 688998888888885
No 147
>2icn_B Prolactin-inducible protein; beta-pleated sheet, complex, seminal fluid; HET: NAG BMA MAN P6G; 3.23A {Homo sapiens} PDB: 3es6_B*
Probab=24.28 E-value=1.7e+02 Score=20.27 Aligned_cols=56 Identities=11% Similarity=0.074 Sum_probs=32.9
Q ss_pred EEecCCE--EEEEEEecCCCCeeEEeeccccCCCCCCCCCccccC-CccCCCCeEEEEEEeC
Q 043378 68 VAREGDQ--LLIKVVKHVQNNISIHWHGIGQLRSGWADGPAYITQ-CPIQTGQGCVYNFTIV 126 (162)
Q Consensus 68 ~v~~Gd~--v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~~vtq-~~I~PG~~~tY~f~~~ 126 (162)
.+.+|+. ++++|.|.+++-.-|..+=.. +...++.+.-.+ .=|-.+++.+|.|.+.
T Consensus 17 Sv~rgE~f~lkatVfNyL~~Ci~V~v~L~~---S~~~~~~~~~~~s~ClC~~~~ktf~W~v~ 75 (118)
T 2icn_B 17 SVRPNDEVTAVLAVQTELKECMVVKTYLIS---SIPLQGAFNYKYTACLCDDNPKTFYWDFY 75 (118)
T ss_dssp EECSSCCEEEEEEEEECCSSCEEEEEEEEE---SSCCCGGGGCEEEEEECSSSCEEEEEEEC
T ss_pred cccCCCEEEEEEEEEeccCcCEEEEEEEcC---CCCeEeecCCcCCEEECCCCCEEEEEEEE
Confidence 4677887 555669999886554443111 112555431111 1156788999999983
No 148
>1o91_A Collagen alpha 1(VIII) chain; C1Q_LIKE_domain, extracellular matrix, adhesion, connective tissue, repeat; HET: CPS; 1.9A {Mus musculus} SCOP: b.22.1.1
Probab=23.45 E-value=40 Score=25.04 Aligned_cols=17 Identities=24% Similarity=0.548 Sum_probs=14.9
Q ss_pred ceEEEecCCEEEEEEEe
Q 043378 65 PRIVAREGDQLLIKVVK 81 (162)
Q Consensus 65 P~I~v~~Gd~v~v~v~N 81 (162)
-+|.+++||+|+|.+..
T Consensus 138 ~vL~L~~GD~Vwl~l~~ 154 (178)
T 1o91_A 138 AVLLLRPGDQVFLQMPS 154 (178)
T ss_dssp EEEEECTTCEEEEECCC
T ss_pred EEEEECCCCEEEEEEec
Confidence 48899999999999854
No 149
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=22.97 E-value=1.5e+02 Score=20.58 Aligned_cols=56 Identities=14% Similarity=0.124 Sum_probs=32.5
Q ss_pred EEecCCE--EEEEEEecCCCC---eeEEeeccccCCCCCCCCCcccc-CCccCCCCeEEEEEEe-CCCcccC
Q 043378 68 VAREGDQ--LLIKVVKHVQNN---ISIHWHGIGQLRSGWADGPAYIT-QCPIQTGQGCVYNFTI-VGQRGKL 132 (162)
Q Consensus 68 ~v~~Gd~--v~v~v~N~l~~~---~siH~HGl~~~~~~~~DG~~~vt-q~~I~PG~~~tY~f~~-~~~~Gt~ 132 (162)
.+++|+. +.++++|....+ ..+.+- .||...-+ ...+++|++.++.|.. +..+|+|
T Consensus 28 ~v~~G~~~ti~vtV~N~G~~~a~~~~V~ly---------vng~~v~t~~v~La~G~s~tv~f~~~~~~~G~~ 90 (127)
T 3idu_A 28 VVGVNKLAEYEVHVKNLGGIGVPSTKVRVY---------INGTLYKNWTVSLGPKEEKVLTFNWTPTQEGMY 90 (127)
T ss_dssp EECTTCCEEEEEEEEECSSSCEEEEEEEEE---------ETTEEEEEEEEEECTTCEEEEEEEECCSSCEEE
T ss_pred cccCCCEEEEEEEEEECCCCccCCcEEEEE---------ECCEEEeeEEeccCCCCeEEEEEEEEcCCCcEE
Confidence 4456664 566788998654 333331 34432111 2348899997776665 2458888
No 150
>3m86_A Amoebiasin-2; cysteine protease inhibitor, protease, protein binding; HET: 1PE; 1.65A {Entamoeba histolytica} PDB: 3m88_A
Probab=22.71 E-value=70 Score=21.72 Aligned_cols=62 Identities=10% Similarity=0.011 Sum_probs=35.9
Q ss_pred CCceEEEecCCEEEEEEEecCCCCeeEEeeccccCCCCCCCCCc-----cc----cCCccCCCCeEEEEEEeCCCcccC
Q 043378 63 PGPRIVAREGDQLLIKVVKHVQNNISIHWHGIGQLRSGWADGPA-----YI----TQCPIQTGQGCVYNFTIVGQRGKL 132 (162)
Q Consensus 63 PGP~I~v~~Gd~v~v~v~N~l~~~~siH~HGl~~~~~~~~DG~~-----~v----tq~~I~PG~~~tY~f~~~~~~Gt~ 132 (162)
=|-+|.++.||++.|+|.=+.... -.|. +... .|+.- +. ....+..|+...+.|++ .++|+.
T Consensus 14 ~g~~I~v~~Ge~~~I~L~~NptTG--Y~W~-~~~~----~~~~~l~~~~~~~~p~~~~~vG~gG~~~~~f~a-~~~G~~ 84 (111)
T 3m86_A 14 DHATLHISFNDLIKIQLRTNPSTG--YAWN-IEYP----TDTFSLSQDTIKAEPHPSGMVGFPSIREIQLKP-LKVGTT 84 (111)
T ss_dssp TTCEEEECTTCEEEEEEEECGGGT--CEEE-EECC----TTTEEEEEEEEEECCCSTTTSSCSEEEEEEEEE-SSCEEE
T ss_pred CCcEEEEcCCCEEEEEECCCCCCC--eEEE-EecC----CCcEEEcccceEeCCCCCCCCCCCeeEEEEEEE-eCCeEE
Confidence 356999999999999998553221 2221 0000 00000 00 01134567888999999 588987
No 151
>1pew_A JTO2, A lambda-6 type immunoglobulin light chain, domain; beta sheet, immune system; 1.60A {Homo sapiens} SCOP: b.1.1.1 PDB: 1cd0_A 1pw3_A 2cd0_A 2w0k_A 3b5g_A 3bdx_A* 2w0l_A
Probab=22.11 E-value=73 Score=20.32 Aligned_cols=29 Identities=14% Similarity=0.334 Sum_probs=21.4
Q ss_pred CCceEEEecCCEEEEEEE-ecCC-CCeeEEee
Q 043378 63 PGPRIVAREGDQLLIKVV-KHVQ-NNISIHWH 92 (162)
Q Consensus 63 PGP~I~v~~Gd~v~v~v~-N~l~-~~~siH~H 92 (162)
| +.+.+.+|+.|.+.=. -... ....++|-
T Consensus 7 p-~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~ 37 (109)
T 1pew_A 7 P-HSVSESPGKTVTISCTRSSGNIASNYVQWY 37 (109)
T ss_dssp C-SEEEECTTSCEEEEEEESSSCGGGSCCEEE
T ss_pred C-CCEEEcCCCCEEEEEEeCCCCCCCccEEEE
Confidence 5 5789999999999887 4432 24678883
No 152
>1p4b_L Antibody variable light chain; FV antibody, antigen peptide binder, SCFV, picomolar binder, immune system; 2.35A {Mus musculus} SCOP: b.1.1.1 PDB: 1p4i_L
Probab=21.88 E-value=95 Score=21.17 Aligned_cols=28 Identities=7% Similarity=0.230 Sum_probs=21.3
Q ss_pred ceEEEecCCEEEEEEEecCCC---CeeEEee
Q 043378 65 PRIVAREGDQLLIKVVKHVQN---NISIHWH 92 (162)
Q Consensus 65 P~I~v~~Gd~v~v~v~N~l~~---~~siH~H 92 (162)
|.+.+++|+.|.|+=+-.... ...++|-
T Consensus 13 ~~v~v~~G~~vtL~C~~~~~~~~~~~~v~Wy 43 (135)
T 1p4b_L 13 SALTTSPGETVTLTCRSSTGAVTTSNYASWV 43 (135)
T ss_dssp SEEEECTTCEEEEEEEETTSSCCGGGCCEEE
T ss_pred CcEEEcCCCCEEEEEEecCCCcCCCCEEEEE
Confidence 459999999999988765432 5678993
No 153
>1oaq_L Light chain; antibody, allergy, IGE, conformational diversity, multispecificity; 1.50A {Rattus rattus} SCOP: b.1.1.1 PDB: 1ocw_L 2bjm_L* 1oau_L* 1oar_L* 1oaz_L 1mfa_L* 1a6v_L* 1oax_L* 1oay_L* 1a6w_L* 1a6u_L 1dl7_L*
Probab=21.86 E-value=93 Score=20.21 Aligned_cols=27 Identities=7% Similarity=0.281 Sum_probs=20.6
Q ss_pred ceEEEecCCEEEEEEEecCCC---CeeEEe
Q 043378 65 PRIVAREGDQLLIKVVKHVQN---NISIHW 91 (162)
Q Consensus 65 P~I~v~~Gd~v~v~v~N~l~~---~~siH~ 91 (162)
|.+.+.+|+.|.+.=.-.... ...++|
T Consensus 8 ~~~~~~~G~~v~L~C~~~~~~~~~~~~v~W 37 (120)
T 1oaq_L 8 SALTTSPGETVTLTCRSSTGAVTTSNYANW 37 (120)
T ss_dssp SEEEECTTCEEEEEEEETTBCCCGGGCCEE
T ss_pred CcEEEcCCCCEEEEEEeCCCccCCCCEEEE
Confidence 458999999999988755432 567888
No 154
>2q5w_D Molybdopterin converting factor, subunit 1; MOCO, MPT synthase, MOAD, MOAE, transferase, molybdenum cofactor biosynthesis; 2.00A {Staphylococcus aureus} PDB: 2qie_B*
Probab=21.08 E-value=37 Score=20.95 Aligned_cols=23 Identities=22% Similarity=0.271 Sum_probs=17.6
Q ss_pred EEEECCCCCCceEEEecCCEEEE
Q 043378 55 IVSVNGKFPGPRIVAREGDQLLI 77 (162)
Q Consensus 55 ~~~~Ng~~PGP~I~v~~Gd~v~v 77 (162)
.+.+||.+-..--.++.||+|.|
T Consensus 48 ~v~vNg~~v~~~~~L~~gD~V~i 70 (77)
T 2q5w_D 48 QVAVNEEFVQKSDFIQPNDTVAL 70 (77)
T ss_dssp EEEETTEEECTTSEECTTCEEEE
T ss_pred EEEECCEECCCCCCcCCCCEEEE
Confidence 57788876555568999999877
No 155
>4ffy_L DENV1-E111 single chain variable fragment (light; viral envelope proteins, structural genomics, antibody epito flavivirus, niaid; 2.50A {Mus musculus}
Probab=21.05 E-value=1.1e+02 Score=20.18 Aligned_cols=28 Identities=18% Similarity=0.207 Sum_probs=21.4
Q ss_pred ceEEEecCCEEEEEEEecCCC----CeeEEee
Q 043378 65 PRIVAREGDQLLIKVVKHVQN----NISIHWH 92 (162)
Q Consensus 65 P~I~v~~Gd~v~v~v~N~l~~----~~siH~H 92 (162)
+.+.+++|+.|.+.-.-.... ...++|.
T Consensus 9 ~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~ 40 (126)
T 4ffy_L 9 ASLAVSLGQRATISCRASESVDHYGNSFIYWY 40 (126)
T ss_dssp SEEEEETTSCEEEEEEESSCCEETTEECEEEE
T ss_pred CeEEEeCCCCEEEEEecCCCcccCCCceEEEE
Confidence 368899999999987765543 5678994
No 156
>2qcp_X Cation efflux system protein CUSF; silver-binding, copper-binding, beta barrel, OB-fold, metall metal resistance, metal-binding; 1.00A {Escherichia coli str} PDB: 1zeq_X 3e6z_X
Probab=20.95 E-value=1.5e+02 Score=18.81 Aligned_cols=21 Identities=14% Similarity=0.210 Sum_probs=16.0
Q ss_pred eEEEecCCEEEEEEEecCCCC
Q 043378 66 RIVAREGDQLLIKVVKHVQNN 86 (162)
Q Consensus 66 ~I~v~~Gd~v~v~v~N~l~~~ 86 (162)
.=.+++||+|++.+.......
T Consensus 51 l~~lk~Gd~V~F~~~~~~~~~ 71 (80)
T 2qcp_X 51 MSEIKTGDKVAFNFVQQGNLS 71 (80)
T ss_dssp ECCCCTTCEEEEEEEEETTEE
T ss_pred hhcCCCCCEEEEEEEEeCCEE
Confidence 346889999999998775443
No 157
>4esk_A LAIR-1, mlair1, leukocyte-associated immunoglobulin-like receptor; IG-like domain, domain swapping, collagen receptor, structural genomics; 1.76A {Mus musculus}
Probab=20.59 E-value=1.2e+02 Score=19.68 Aligned_cols=20 Identities=20% Similarity=0.431 Sum_probs=12.4
Q ss_pred CCCCCceE------EEecCCEEEEEE
Q 043378 60 GKFPGPRI------VAREGDQLLIKV 79 (162)
Q Consensus 60 g~~PGP~I------~v~~Gd~v~v~v 79 (162)
|.+|-|.| .+..|+.|.++=
T Consensus 5 g~lpkPsL~a~p~~~v~~G~~VTL~C 30 (102)
T 4esk_A 5 GSLPDITIFPNSSLMISQGTFVTVVC 30 (102)
T ss_dssp -CCCEEEEECCSEEEEETTCCEEEEE
T ss_pred CCCCCCEEEEeCCCcccCCCcEEEEE
Confidence 44555555 455688887777
No 158
>3ugn_A Tumor necrosis factor ligand superfamily member 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAG; 2.59A {Homo sapiens} PDB: 4en0_A*
Probab=20.58 E-value=33 Score=25.44 Aligned_cols=23 Identities=17% Similarity=0.473 Sum_probs=19.3
Q ss_pred CCCCceEEEecCCEEEEEEEecC
Q 043378 61 KFPGPRIVAREGDQLLIKVVKHV 83 (162)
Q Consensus 61 ~~PGP~I~v~~Gd~v~v~v~N~l 83 (162)
.+-|-+..+++||+|.|.+.|..
T Consensus 128 ~ylGGvf~L~~GD~L~V~Vs~~~ 150 (167)
T 3ugn_A 128 SFLGGVVHLEAGEEVVVRVLDER 150 (167)
T ss_dssp EEEEEEEEECTTCEEEEEEESCC
T ss_pred eeeceeEEeCCCCEEEEEeCChh
Confidence 35567889999999999999874
No 159
>4ety_A LAIR-1, mlair1, leukocyte-associated immunoglobulin-like receptor; IG-like domain, extra celluar domain, domain swappin nysgrc, structural genomics; 1.90A {Mus musculus}
Probab=20.32 E-value=1.3e+02 Score=20.32 Aligned_cols=20 Identities=20% Similarity=0.406 Sum_probs=13.0
Q ss_pred CCCCCceEE------EecCCEEEEEE
Q 043378 60 GKFPGPRIV------AREGDQLLIKV 79 (162)
Q Consensus 60 g~~PGP~I~------v~~Gd~v~v~v 79 (162)
|.+|-|+|. +.+|+.|.++=
T Consensus 5 g~lpkPsL~a~P~~vV~~G~~VTL~C 30 (118)
T 4ety_A 5 GSLPDITIFPNSSLMISQGTFVTVVC 30 (118)
T ss_dssp -CCCEEEEECCSEEEEETTCCEEEEE
T ss_pred CCCCCCEEEEeCCCcccCCCcEEEEE
Confidence 556666664 55678877777
No 160
>1tnr_A Tumor necrosis factor beta; complex(lymphokine/receptor); 2.85A {Homo sapiens} SCOP: b.22.1.1
Probab=20.24 E-value=35 Score=24.25 Aligned_cols=21 Identities=24% Similarity=0.316 Sum_probs=17.3
Q ss_pred CCCceEEEecCCEEEEEEEec
Q 043378 62 FPGPRIVAREGDQLLIKVVKH 82 (162)
Q Consensus 62 ~PGP~I~v~~Gd~v~v~v~N~ 82 (162)
+-|=.+.+++||+|.|++.|.
T Consensus 107 y~ggvf~L~~GD~l~v~v~~~ 127 (144)
T 1tnr_A 107 YHGAAFQLTQGDQLSTHTDGI 127 (144)
T ss_dssp EEEEEEEECTTCEEEEEEECG
T ss_pred EEeeEEEeCCCCEEEEEeCCc
Confidence 445689999999999998763
Done!