Query 043381
Match_columns 286
No_of_seqs 197 out of 758
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 07:15:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043381.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043381hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1k3i_A Galactose oxidase precu 100.0 2.1E-55 7.3E-60 442.3 27.0 240 14-286 409-655 (656)
2 4asc_A Kelch repeat and BTB do 99.6 1.2E-14 4.3E-19 131.8 14.6 126 14-172 97-223 (315)
3 3ii7_A Kelch-like protein 7; p 99.6 1.9E-14 6.7E-19 129.6 14.7 127 14-172 100-227 (306)
4 1zgk_A Kelch-like ECH-associat 99.6 3.5E-14 1.2E-18 128.6 15.3 122 14-172 167-289 (308)
5 2xn4_A Kelch-like protein 2; s 99.6 2.5E-14 8.4E-19 128.6 14.0 124 14-172 154-278 (302)
6 3ii7_A Kelch-like protein 7; p 99.6 4.6E-14 1.6E-18 127.1 15.1 126 14-172 54-180 (306)
7 2vpj_A Kelch-like protein 12; 99.6 5.1E-14 1.8E-18 126.3 15.2 121 14-171 158-279 (301)
8 2woz_A Kelch repeat and BTB do 99.6 2.1E-14 7.3E-19 130.4 12.8 126 14-173 108-234 (318)
9 2xn4_A Kelch-like protein 2; s 99.6 2.4E-14 8.3E-19 128.7 12.8 123 15-172 61-184 (302)
10 1zgk_A Kelch-like ECH-associat 99.6 5.7E-14 2E-18 127.2 15.4 122 14-172 120-242 (308)
11 2vpj_A Kelch-like protein 12; 99.5 8.7E-14 3E-18 124.8 15.7 122 14-172 111-233 (301)
12 2woz_A Kelch repeat and BTB do 99.5 3.6E-14 1.2E-18 128.9 11.8 131 14-172 157-289 (318)
13 4asc_A Kelch repeat and BTB do 99.5 1.3E-13 4.5E-18 125.0 15.0 132 14-172 44-176 (315)
14 1k3i_A Galactose oxidase precu 99.5 1.8E-13 6.2E-18 137.3 12.3 125 15-171 197-324 (656)
15 2uvk_A YJHT; unknown function, 99.5 3.5E-13 1.2E-17 123.8 12.9 107 15-146 19-129 (357)
16 2zwa_A Leucine carboxyl methyl 99.4 1.2E-12 4.2E-17 133.1 15.1 120 15-172 397-524 (695)
17 2zwa_A Leucine carboxyl methyl 99.4 1.1E-12 3.8E-17 133.5 13.9 124 15-172 451-579 (695)
18 2uvk_A YJHT; unknown function, 99.4 2E-12 6.8E-17 118.8 9.9 118 14-147 199-328 (357)
19 3no2_A Uncharacterized protein 93.1 0.71 2.4E-05 40.6 10.7 93 15-144 4-96 (276)
20 3fm0_A Protein CIAO1; WDR39,SG 88.9 1.2 4E-05 39.7 7.8 98 15-146 27-127 (345)
21 1w8o_A Bacterial sialidase; 3D 88.4 4.1 0.00014 39.7 12.0 131 109-271 306-438 (601)
22 3f3f_A Nucleoporin SEH1; struc 87.9 2.6 9E-05 35.5 9.1 103 15-146 22-134 (351)
23 3jrp_A Fusion protein of prote 87.3 4.3 0.00015 35.0 10.4 101 15-145 171-277 (379)
24 3no2_A Uncharacterized protein 86.6 2.5 8.6E-05 37.0 8.5 83 43-143 147-231 (276)
25 1k8k_C P40, ARP2/3 complex 41 86.1 3.4 0.00012 35.8 9.0 98 15-146 19-118 (372)
26 4e54_B DNA damage-binding prot 85.8 4.4 0.00015 37.0 10.1 60 71-146 171-231 (435)
27 3fm0_A Protein CIAO1; WDR39,SG 84.8 2.9 9.8E-05 37.1 8.0 61 70-146 156-216 (345)
28 3jrp_A Fusion protein of prote 84.1 2.9 0.0001 36.1 7.6 98 15-146 22-125 (379)
29 2pm7_B Protein transport prote 84.1 2.3 7.8E-05 36.8 6.9 56 75-146 66-123 (297)
30 2xbg_A YCF48-like protein; pho 84.0 5 0.00017 35.8 9.3 80 46-143 144-223 (327)
31 1gxr_A ESG1, transducin-like e 83.1 4.1 0.00014 34.5 8.0 66 65-146 98-163 (337)
32 3ow8_A WD repeat-containing pr 82.9 12 0.0004 32.8 11.2 57 69-144 253-310 (321)
33 2pbi_B Guanine nucleotide-bind 82.0 8.9 0.00031 34.0 10.2 59 70-145 246-305 (354)
34 2hes_X YDR267CP; beta-propelle 81.6 6.1 0.00021 34.6 8.8 88 43-146 130-221 (330)
35 1got_B GT-beta; complex (GTP-b 81.0 10 0.00036 33.2 10.1 58 70-144 232-290 (340)
36 3ow8_A WD repeat-containing pr 80.8 10 0.00036 33.1 10.1 58 69-145 169-227 (321)
37 3dwl_C Actin-related protein 2 80.7 2 6.7E-05 37.8 5.2 98 15-146 22-122 (377)
38 3iz6_a 40S ribosomal protein R 80.4 16 0.00053 32.6 11.3 60 70-145 255-319 (380)
39 3jro_A Fusion protein of prote 80.1 6.1 0.00021 39.4 9.2 91 43-146 181-276 (753)
40 1q7f_A NHL, brain tumor CG1071 78.1 27 0.00092 29.2 11.5 59 69-144 168-226 (286)
41 1k8k_C P40, ARP2/3 complex 41 78.1 12 0.0004 32.3 9.3 43 43-85 119-163 (372)
42 3bg1_A Protein SEC13 homolog; 77.1 3.8 0.00013 35.7 5.9 56 75-146 70-127 (316)
43 3ei3_B DNA damage-binding prot 76.5 10 0.00035 33.3 8.6 86 43-146 97-185 (383)
44 1gxr_A ESG1, transducin-like e 74.5 15 0.0005 31.0 8.8 58 69-145 146-204 (337)
45 2ynn_A Coatomer subunit beta'; 74.1 8.1 0.00028 33.3 7.2 54 73-145 195-249 (304)
46 3jro_A Fusion protein of prote 73.4 7 0.00024 39.0 7.4 98 15-146 20-123 (753)
47 2aq5_A Coronin-1A; WD40 repeat 73.0 10 0.00035 33.8 7.8 59 67-143 179-239 (402)
48 3v9f_A Two-component system se 72.9 34 0.0012 34.0 12.3 57 70-144 588-647 (781)
49 2pm7_B Protein transport prote 72.6 25 0.00087 29.9 10.0 86 43-144 181-274 (297)
50 1ri6_A Putative isomerase YBHE 72.4 19 0.00064 30.4 9.1 84 43-143 16-103 (343)
51 3lrv_A PRE-mRNA-splicing facto 72.4 23 0.00077 30.8 9.8 85 43-144 150-234 (343)
52 4ery_A WD repeat-containing pr 71.3 35 0.0012 28.8 10.6 61 70-146 198-259 (312)
53 3vu4_A KMHSV2; beta-propeller 71.1 24 0.00082 31.2 9.8 63 69-144 245-325 (355)
54 4ery_A WD repeat-containing pr 71.0 41 0.0014 28.3 11.0 55 71-144 244-299 (312)
55 1vyh_C Platelet-activating fac 70.9 13 0.00046 33.6 8.2 59 70-146 156-214 (410)
56 2dg1_A DRP35, lactonase; beta 70.8 31 0.0011 29.5 10.2 63 69-144 91-154 (333)
57 3k26_A Polycomb protein EED; W 70.3 25 0.00087 29.8 9.5 62 69-146 120-183 (366)
58 1jmx_B Amine dehydrogenase; ox 70.2 20 0.00069 30.4 8.8 95 15-144 10-111 (349)
59 3mmy_A MRNA export factor; mRN 69.5 21 0.00073 30.3 8.8 96 16-146 54-151 (368)
60 2xbg_A YCF48-like protein; pho 69.4 12 0.00043 33.2 7.5 75 53-144 193-269 (327)
61 1q7f_A NHL, brain tumor CG1071 69.1 49 0.0017 27.5 12.1 56 68-143 124-182 (286)
62 3fvz_A Peptidyl-glycine alpha- 68.8 20 0.00069 31.3 8.7 86 54-144 14-110 (329)
63 3hfq_A Uncharacterized protein 68.6 14 0.00046 32.1 7.4 87 43-143 17-104 (347)
64 1got_B GT-beta; complex (GTP-b 67.6 14 0.00049 32.2 7.4 58 70-145 276-333 (340)
65 2pbi_B Guanine nucleotide-bind 67.6 14 0.00047 32.8 7.3 58 70-145 290-347 (354)
66 1yfq_A Cell cycle arrest prote 67.2 26 0.0009 29.6 8.9 59 69-147 256-315 (342)
67 3vl1_A 26S proteasome regulato 66.6 37 0.0013 29.8 10.1 28 69-109 186-213 (420)
68 1r5m_A SIR4-interacting protei 66.4 9.9 0.00034 33.2 6.1 60 68-146 112-171 (425)
69 3zwl_B Eukaryotic translation 66.2 24 0.00083 29.9 8.4 60 68-147 222-282 (369)
70 2qc5_A Streptogramin B lactona 65.5 49 0.0017 27.2 10.1 58 69-144 66-123 (300)
71 2hes_X YDR267CP; beta-propelle 65.0 28 0.00095 30.3 8.8 63 70-146 113-175 (330)
72 3gre_A Serine/threonine-protei 64.8 18 0.00063 32.3 7.7 99 15-146 181-283 (437)
73 2ovr_B FBW7, F-BOX/WD repeat p 64.1 42 0.0014 30.1 10.1 59 73-147 369-430 (445)
74 3iz6_a 40S ribosomal protein R 64.0 70 0.0024 28.2 11.4 62 69-146 303-366 (380)
75 3vl1_A 26S proteasome regulato 63.8 24 0.0008 31.1 8.1 97 14-144 257-354 (420)
76 1rwi_B Serine/threonine-protei 63.3 60 0.0021 26.5 10.3 57 68-143 70-126 (270)
77 1nr0_A Actin interacting prote 62.9 22 0.00075 34.2 8.3 57 70-145 497-557 (611)
78 1pgu_A Actin interacting prote 62.4 21 0.00072 33.1 7.8 60 68-145 535-604 (615)
79 3zwl_B Eukaryotic translation 62.3 42 0.0015 28.3 9.3 58 69-145 79-136 (369)
80 3hfq_A Uncharacterized protein 61.7 54 0.0019 28.1 10.0 85 43-143 210-304 (347)
81 2z2n_A Virginiamycin B lyase; 61.5 57 0.0019 26.8 9.8 56 69-143 229-284 (299)
82 2ynn_A Coatomer subunit beta'; 61.0 18 0.00061 31.0 6.6 59 70-146 61-119 (304)
83 1l0q_A Surface layer protein; 61.0 60 0.0021 28.1 10.2 58 68-144 35-94 (391)
84 3dwl_C Actin-related protein 2 60.9 9.7 0.00033 33.2 4.9 61 70-146 17-77 (377)
85 3mvd_K Regulator of chromosome 60.6 17 0.00058 33.5 6.8 74 67-148 304-377 (423)
86 1erj_A Transcriptional repress 60.5 36 0.0012 30.3 8.8 59 69-146 170-229 (393)
87 1vyh_C Platelet-activating fac 60.4 21 0.00072 32.3 7.3 60 69-146 197-256 (410)
88 2xzm_R RACK1; ribosome, transl 59.7 42 0.0014 29.1 9.0 58 70-146 82-140 (343)
89 3vgz_A Uncharacterized protein 58.7 55 0.0019 27.7 9.4 56 69-143 235-291 (353)
90 3u4y_A Uncharacterized protein 58.3 57 0.0019 27.5 9.4 84 42-143 198-292 (331)
91 4gqb_B Methylosome protein 50; 58.2 57 0.002 28.8 9.7 57 71-144 176-235 (344)
92 1erj_A Transcriptional repress 57.5 43 0.0015 29.8 8.8 60 70-145 212-277 (393)
93 3dm0_A Maltose-binding peripla 57.2 24 0.00083 34.2 7.5 59 69-146 435-494 (694)
94 3a72_A EXO-arabinanase; arabin 57.2 23 0.00079 32.7 7.0 87 45-141 117-221 (355)
95 1a12_A RCC1, regulator of chro 57.0 20 0.00067 33.0 6.5 76 67-148 242-317 (413)
96 1yfq_A Cell cycle arrest prote 56.6 59 0.002 27.3 9.2 98 15-146 22-122 (342)
97 3kci_A Probable E3 ubiquitin-p 55.3 14 0.00047 33.9 5.1 76 67-148 63-138 (389)
98 2aq5_A Coronin-1A; WD40 repeat 55.0 24 0.00083 31.3 6.6 85 43-144 246-333 (402)
99 2z2n_A Virginiamycin B lyase; 54.8 87 0.003 25.6 10.2 58 68-143 102-159 (299)
100 2pm9_A Protein WEB1, protein t 54.5 52 0.0018 28.6 8.7 63 68-146 169-237 (416)
101 4gqb_B Methylosome protein 50; 54.0 68 0.0023 28.3 9.5 59 69-146 132-192 (344)
102 4aez_A CDC20, WD repeat-contai 54.0 33 0.0011 30.5 7.3 59 68-144 307-369 (401)
103 4d9s_A UVB-resistance protein 53.2 20 0.0007 33.0 6.0 73 67-148 287-360 (406)
104 3frx_A Guanine nucleotide-bind 52.8 35 0.0012 29.4 7.2 60 69-146 70-129 (319)
105 4d9s_A UVB-resistance protein 52.4 21 0.00071 32.9 5.9 74 67-148 235-308 (406)
106 1sq9_A Antiviral protein SKI8; 51.5 64 0.0022 27.9 8.7 66 68-145 237-312 (397)
107 4h5i_A Guanine nucleotide-exch 50.7 51 0.0018 29.2 8.1 61 69-146 181-241 (365)
108 3mvd_K Regulator of chromosome 50.5 28 0.00094 32.0 6.4 68 67-143 85-153 (423)
109 4aow_A Guanine nucleotide-bind 50.4 51 0.0017 27.7 7.7 17 130-146 312-328 (340)
110 2vov_A MOPE, surface-associate 49.4 22 0.00076 30.9 5.0 33 247-285 278-331 (336)
111 4a2l_A BT_4663, two-component 49.4 2E+02 0.007 28.3 16.1 56 71-144 592-650 (795)
112 3mkq_A Coatomer beta'-subunit; 49.4 68 0.0023 31.1 9.3 84 43-146 164-250 (814)
113 1rwi_B Serine/threonine-protei 49.3 1E+02 0.0036 24.9 10.4 57 69-143 154-210 (270)
114 2pm9_A Protein WEB1, protein t 49.2 46 0.0016 29.0 7.4 88 42-146 45-136 (416)
115 2ymu_A WD-40 repeat protein; u 48.9 52 0.0018 30.4 8.1 57 70-145 514-570 (577)
116 3nol_A Glutamine cyclotransfer 48.0 89 0.0031 27.7 9.1 51 43-109 66-117 (262)
117 3i2n_A WD repeat-containing pr 47.8 22 0.00075 30.2 4.9 18 68-85 263-281 (357)
118 3kci_A Probable E3 ubiquitin-p 47.7 24 0.00083 32.2 5.5 74 67-148 275-348 (389)
119 4a11_B DNA excision repair pro 47.5 1.3E+02 0.0045 25.6 10.1 63 69-145 191-266 (408)
120 3a72_A EXO-arabinanase; arabin 47.2 16 0.00055 33.7 4.1 68 68-143 26-105 (355)
121 3bws_A Protein LP49; two-domai 47.1 54 0.0018 28.9 7.6 76 54-145 111-190 (433)
122 4fj6_A Glycoside hydrolase fam 47.0 47 0.0016 32.3 7.7 87 45-141 294-391 (523)
123 2xzm_R RACK1; ribosome, transl 46.5 1.4E+02 0.0048 25.6 10.2 16 70-85 124-139 (343)
124 1r5m_A SIR4-interacting protei 45.9 62 0.0021 27.9 7.7 58 68-144 293-350 (425)
125 1a12_A RCC1, regulator of chro 45.5 23 0.00077 32.6 4.9 73 67-148 296-368 (413)
126 3k26_A Polycomb protein EED; W 44.9 65 0.0022 27.2 7.5 60 71-144 292-355 (366)
127 4e54_B DNA damage-binding prot 44.4 1.7E+02 0.0059 26.1 11.3 68 71-143 351-419 (435)
128 4aow_A Guanine nucleotide-bind 43.9 39 0.0013 28.4 5.9 62 72-146 46-108 (340)
129 3lrv_A PRE-mRNA-splicing facto 43.6 45 0.0015 28.8 6.4 58 70-144 131-190 (343)
130 4g56_B MGC81050 protein; prote 43.2 84 0.0029 27.6 8.2 57 72-144 189-247 (357)
131 3bws_A Protein LP49; two-domai 42.9 1E+02 0.0035 27.0 8.8 82 43-144 192-273 (433)
132 3dsm_A Uncharacterized protein 42.5 1.7E+02 0.0057 25.3 11.0 95 42-169 203-301 (328)
133 3of7_A Regulator of chromosome 41.7 32 0.0011 32.4 5.4 77 67-148 323-408 (473)
134 2vdu_B TRNA (guanine-N(7)-)-me 41.4 1.8E+02 0.0062 26.0 10.4 22 75-109 251-272 (450)
135 3i2n_A WD repeat-containing pr 41.0 1.4E+02 0.0047 25.0 9.0 53 73-144 177-232 (357)
136 1ri6_A Putative isomerase YBHE 40.9 1.2E+02 0.004 25.3 8.5 66 42-122 253-321 (343)
137 4a11_B DNA excision repair pro 40.5 51 0.0017 28.4 6.2 28 69-109 104-132 (408)
138 2iwa_A Glutamine cyclotransfer 40.5 57 0.0019 28.8 6.6 60 68-143 24-83 (266)
139 3bg1_A Protein SEC13 homolog; 39.7 1.1E+02 0.0039 26.0 8.4 54 76-144 179-236 (316)
140 3vgz_A Uncharacterized protein 39.4 1.4E+02 0.0047 25.1 8.8 56 70-144 277-334 (353)
141 3of7_A Regulator of chromosome 39.0 33 0.0011 32.3 5.1 75 67-148 267-344 (473)
142 3ott_A Two-component system se 37.9 3E+02 0.01 26.9 18.8 54 71-144 564-617 (758)
143 2ydt_A EXO-1,5-alpha-L-arabino 37.7 38 0.0013 31.4 5.1 68 67-142 30-109 (367)
144 3odt_A Protein DOA1; ubiquitin 37.6 44 0.0015 27.6 5.1 58 71-146 24-81 (313)
145 4h5i_A Guanine nucleotide-exch 37.3 56 0.0019 28.9 6.1 57 71-145 276-333 (365)
146 2dg1_A DRP35, lactonase; beta 36.8 66 0.0023 27.3 6.3 58 69-144 49-106 (333)
147 3e5z_A Putative gluconolactona 36.2 1.5E+02 0.005 24.7 8.4 80 42-141 50-131 (296)
148 3dm0_A Maltose-binding peripla 36.2 1.2E+02 0.004 29.3 8.6 17 130-146 668-684 (694)
149 3g4e_A Regucalcin; six bladed 36.0 60 0.002 27.7 5.9 78 43-142 36-115 (297)
150 1pgu_A Actin interacting prote 35.7 1.4E+02 0.0048 27.4 8.8 59 69-145 493-562 (615)
151 2qc5_A Streptogramin B lactona 35.0 87 0.003 25.6 6.6 57 69-143 24-80 (300)
152 3dw8_B Serine/threonine-protei 34.3 1E+02 0.0035 27.1 7.3 64 68-146 289-364 (447)
153 3scy_A Hypothetical bacterial 34.3 2.2E+02 0.0075 24.3 10.8 111 14-167 164-288 (361)
154 1sq9_A Antiviral protein SKI8; 34.1 1.1E+02 0.0039 26.2 7.5 63 68-146 66-148 (397)
155 3q7m_A Lipoprotein YFGL, BAMB; 34.0 1.8E+02 0.0063 25.2 9.0 81 43-143 64-151 (376)
156 4gga_A P55CDC, cell division c 33.8 1.2E+02 0.004 27.0 7.7 83 42-146 125-209 (420)
157 4g56_B MGC81050 protein; prote 33.6 1.2E+02 0.004 26.6 7.6 28 69-109 144-171 (357)
158 3v7d_B Cell division control p 33.1 1.6E+02 0.0054 26.2 8.5 57 71-146 275-332 (464)
159 3frx_A Guanine nucleotide-bind 33.0 1.2E+02 0.0041 25.9 7.4 17 130-146 292-308 (319)
160 4aez_A CDC20, WD repeat-contai 32.1 1.7E+02 0.0059 25.6 8.5 82 42-146 113-196 (401)
161 4ggc_A P55CDC, cell division c 31.9 60 0.0021 26.9 5.1 44 100-146 46-89 (318)
162 1nir_A Nitrite reductase; hemo 31.8 2.3E+02 0.0077 26.9 9.8 58 67-143 181-244 (543)
163 2p9w_A MAL S 1 allergenic prot 31.8 1.3E+02 0.0043 27.7 7.6 115 15-144 76-204 (334)
164 2vdu_B TRNA (guanine-N(7)-)-me 31.2 1.2E+02 0.0039 27.4 7.3 59 69-146 200-262 (450)
165 3mkq_A Coatomer beta'-subunit; 31.0 65 0.0022 31.3 5.8 61 69-146 102-163 (814)
166 3mmy_A MRNA export factor; mRN 30.8 58 0.002 27.5 4.8 59 69-145 278-336 (368)
167 2hqs_A Protein TOLB; TOLB, PAL 30.0 2.4E+02 0.0083 25.2 9.3 59 69-144 315-373 (415)
168 3mbr_X Glutamine cyclotransfer 29.0 1.3E+02 0.0045 26.2 6.9 62 66-143 21-82 (243)
169 2iwa_A Glutamine cyclotransfer 28.7 2.9E+02 0.01 24.0 11.0 52 42-109 44-96 (266)
170 2ymu_A WD-40 repeat protein; u 28.5 71 0.0024 29.4 5.4 58 70-146 22-79 (577)
171 3dsm_A Uncharacterized protein 28.4 2.3E+02 0.0078 24.4 8.5 91 42-142 152-243 (328)
172 3sfz_A APAF-1, apoptotic pepti 28.4 1.1E+02 0.0038 31.5 7.3 58 69-146 1183-1240(1249)
173 1qks_A Cytochrome CD1 nitrite 28.4 1.9E+02 0.0064 28.0 8.6 82 42-143 177-262 (567)
174 2qe8_A Uncharacterized protein 28.3 1.5E+02 0.0053 25.7 7.4 58 70-145 253-311 (343)
175 3u4y_A Uncharacterized protein 28.1 2.6E+02 0.0088 23.2 12.0 79 43-144 21-103 (331)
176 3ei3_B DNA damage-binding prot 27.3 87 0.003 27.1 5.5 63 68-146 77-141 (383)
177 1nr0_A Actin interacting prote 27.3 47 0.0016 31.7 4.0 59 70-145 454-512 (611)
178 2vsd_A CHIR AB1; immune system 27.2 1.7E+02 0.0059 20.9 6.9 39 178-223 4-43 (105)
179 3nol_A Glutamine cyclotransfer 26.9 92 0.0032 27.6 5.6 68 60-143 36-104 (262)
180 3v7d_B Cell division control p 26.7 2.4E+02 0.0081 25.0 8.5 28 68-109 395-422 (464)
181 1nir_A Nitrite reductase; hemo 26.6 2.4E+02 0.0084 26.7 9.0 86 42-143 302-389 (543)
182 3kgr_A LAIR-1, hlair1, leukocy 25.9 1.2E+02 0.0041 21.9 5.3 40 178-224 8-48 (106)
183 1kv9_A Type II quinohemoprotei 25.7 3.1E+02 0.011 26.8 9.8 86 43-143 77-170 (668)
184 3vu4_A KMHSV2; beta-propeller 25.5 1.2E+02 0.0042 26.4 6.2 60 70-145 201-261 (355)
185 3sil_A Sialidase; glycosidase, 25.5 81 0.0028 29.3 5.1 69 68-144 176-244 (379)
186 3q7m_A Lipoprotein YFGL, BAMB; 25.3 3E+02 0.01 23.7 8.8 80 43-143 288-367 (376)
187 4ggc_A P55CDC, cell division c 24.6 1.9E+02 0.0066 23.6 7.0 83 42-146 45-129 (318)
188 3f3f_A Nucleoporin SEH1; struc 24.4 80 0.0027 26.0 4.5 63 70-146 17-81 (351)
189 2oaj_A Protein SNI1; WD40 repe 24.1 1.8E+02 0.0062 29.6 7.9 17 69-85 493-509 (902)
190 2ojh_A Uncharacterized protein 23.5 1.4E+02 0.0047 23.9 5.7 82 42-144 22-104 (297)
191 2p4o_A Hypothetical protein; p 23.3 1.4E+02 0.0046 25.6 5.9 60 68-142 75-134 (306)
192 1p22_A F-BOX/WD-repeat protein 23.1 2.6E+02 0.0089 24.7 8.0 50 75-145 265-315 (435)
193 3eja_A Protein GH61E; beta san 23.0 3.5E+02 0.012 23.0 10.1 80 189-273 50-142 (208)
194 2j04_A TAU60, YPL007P, hypothe 22.2 62 0.0021 32.2 3.8 58 71-146 92-151 (588)
195 1yiq_A Quinohemoprotein alcoho 21.8 4.3E+02 0.015 25.9 9.9 86 43-143 81-175 (689)
196 1pjx_A Dfpase, DIISOPROPYLFLUO 21.6 2.4E+02 0.0081 23.3 7.0 57 69-144 75-136 (314)
197 1pby_B Quinohemoprotein amine 21.2 3.4E+02 0.012 22.2 9.6 52 43-109 12-66 (337)
198 3mbr_X Glutamine cyclotransfer 21.0 4.1E+02 0.014 23.0 11.2 52 42-109 43-95 (243)
199 3nok_A Glutaminyl cyclase; bet 20.8 4.4E+02 0.015 23.3 9.7 104 13-171 62-165 (268)
200 3fvz_A Peptidyl-glycine alpha- 20.5 4E+02 0.014 22.7 11.8 63 71-144 247-311 (329)
201 3qhy_B Beta-lactamase inhibito 20.3 93 0.0032 27.1 4.2 20 126-147 229-248 (282)
202 2ydt_A EXO-1,5-alpha-L-arabino 20.3 2.1E+02 0.0072 26.2 6.9 57 74-147 286-346 (367)
No 1
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=100.00 E-value=2.1e-55 Score=442.31 Aligned_cols=240 Identities=24% Similarity=0.390 Sum_probs=203.9
Q ss_pred CccEEEEEcCCCCCCCcccCCCccccccCcEEEEEecCC-CCCeEee---cCCCCccccceEEeCCCcEEEEcCccCCCC
Q 043381 14 IRAEVLICGGAKPEAGMLAGKGEFMNALQDCGRIEITNK-SATWQRE---MMPSPRVMGEMLLLPTGDVLIINGAKKGTA 89 (286)
Q Consensus 14 ~~~~Vlv~GG~~~~~~~~~~~~~~~~a~~s~~~id~~~~-~~~W~~~---~M~~~R~~~~~v~LpdG~VlvvGG~~~g~a 89 (286)
.+++||+|||... +. ...++++|..+++.++ .++|+.. +|+.+|.+|++++||||+|||+||.+.+.
T Consensus 409 ~~~~i~v~GG~~~--~~------~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~- 479 (656)
T 1k3i_A 409 VKGKILTFGGSPD--YQ------DSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGI- 479 (656)
T ss_dssp TTTEEEEECCBSS--SS------SSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCC-
T ss_pred CCCeEEEEeCCCC--CC------CCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCc-
Confidence 3789999999752 21 1256777777666554 4789864 89999999999999999999999987543
Q ss_pred CccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCCCCCCcccCCCCCCCcccEEEEEeCC
Q 043381 90 GWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPHSRYNLTSGSKYPTELRIEKFYPP 169 (286)
Q Consensus 90 g~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~~~~~~~~~~~~~p~~~~vE~y~Pp 169 (286)
+|. +.+++.+.|+|||+++ +|+.+++++++|.|||+|+||+||+|||+||+.+..+. .+++++|+|+||
T Consensus 480 ~~~-~~~~~~~v~~ydp~t~---~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~~~~~~~-------~~~~~~e~~~Pp 548 (656)
T 1k3i_A 480 PFE-DSTPVFTPEIYVPEQD---TFYKQNPNSIVRVYHSISLLLPDGRVFNGGGGLCGDCT-------TNHFDAQIFTPN 548 (656)
T ss_dssp TTC-CCSBCCCCEEEEGGGT---EEEECCCCSSCCCTTEEEEECTTSCEEEEECCCCTTCS-------CCCCEEEEEECG
T ss_pred CcC-CCCcccceEEEcCCCC---ceeecCCCCCccccccHhhcCCCcEEEecCCCCCCCCC-------CCeeEEEEEeCh
Confidence 333 4567889999999999 99999999999999999999999999999998877542 247899999999
Q ss_pred CCCCC--CCCCCCceeecCCCceeecCCEEEEEEEecccccccCcEEEEEEcCCccccccCCCcceEEecceeeeecCCc
Q 043381 170 YFDES--FASYRPSIVSKFKGKMVKYGQNFVIQFKLDELEVSLNDLKVTMYAPPFTTHGVSMGQRLLVLATKELIDVGSG 247 (286)
Q Consensus 170 yl~~~--~~~~RP~i~~~~~p~~~~~g~~~~v~~~~~~~~~~~~~~~v~L~~~~~~THs~n~~QR~v~L~~~~~~~~g~~ 247 (286)
||+++ ..+.||+|+++. |+++.||++|+|+++. .+.+|+|||++|+||++||+||+|+|+++. .|.
T Consensus 549 yl~~~~~~~~~rP~i~~~~-~~~~~~g~~~~~~~~~-------~~~~~~l~~~~~~th~~~~~qr~~~l~~~~---~~~- 616 (656)
T 1k3i_A 549 YLYNSNGNLATRPKITRTS-TQSVKVGGRITISTDS-------SISKASLIRYGTATHTVNTDQRRIPLTLTN---NGG- 616 (656)
T ss_dssp GGBCTTSSBCCCCCEEEES-CSEEETTCEEEEEESS-------CCSEEEEEECCEEETTBCSSCCEEECCEEE---EET-
T ss_pred hhccCCCCcCCCCcccccC-CceecCCCEEEEEEec-------cceEEEEEecCccccCcCCCCcEEecceEe---cCC-
Confidence 99863 556899999843 8999999999999863 367899999999999999999999999975 232
Q ss_pred eEEEEEEcCCCCCcCCCcceEEEEEc-CCCCCccEEEEeC
Q 043381 248 IFQVSVTAPPTAKIAPPSFYLLFVVY-RQVPSPGTWVQIG 286 (286)
Q Consensus 248 ~~~~~v~~P~~~~vappG~YmLFv~~-~GvPS~a~~V~i~ 286 (286)
.+++|++|+|++||||||||||||+ +||||+|+||+|.
T Consensus 617 -~~~~~~~p~~~~~~ppg~y~lf~~~~~g~ps~~~~v~~~ 655 (656)
T 1k3i_A 617 -NSYSFQVPSDSGVALPGYWMLFVMNSAGVPSVASTIRVT 655 (656)
T ss_dssp -TEEEEECCSCTTTSCSEEEEEEEECTTSCBCCCEEEEEE
T ss_pred -CEEEEECCCCCCcCCCcCeEEEEECCCCcccccEEEEEe
Confidence 3678999999999999999999996 9999999999984
No 2
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.59 E-value=1.2e-14 Score=131.80 Aligned_cols=126 Identities=18% Similarity=0.228 Sum_probs=100.7
Q ss_pred CccEEEEEcCCCCCCCcccCCCccccccCcEEEEEecCCCCCeEee-cCCCCccccceEEeCCCcEEEEcCccCCCCCcc
Q 043381 14 IRAEVLICGGAKPEAGMLAGKGEFMNALQDCGRIEITNKSATWQRE-MMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWN 92 (286)
Q Consensus 14 ~~~~Vlv~GG~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~~~R~~~~~v~LpdG~VlvvGG~~~g~ag~~ 92 (286)
..++|+++||..... ....++++++||+. +++|+.. +||.+|..|.++++ +++|||+||...+
T Consensus 97 ~~~~lyv~GG~~~~~--------~~~~~~~~~~~d~~--~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~----- 160 (315)
T 4asc_A 97 ALNSIYVVGGREIKD--------GERCLDSVMCYDRL--SFKWGESDPLPYVVYGHTVLSH-MDLVYVIGGKGSD----- 160 (315)
T ss_dssp ETTEEEEECCEESST--------TCCBCCCEEEEETT--TTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCTT-----
T ss_pred ECCEEEEEeCCcCCC--------CCcccceEEEECCC--CCcEeECCCCCCcccceeEEEE-CCEEEEEeCCCCC-----
Confidence 367999999964110 12467899999997 4799998 99999999987776 9999999997421
Q ss_pred CCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCCCCCCcccCCCCCCCcccEEEEEeCCCCC
Q 043381 93 FATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPHSRYNLTSGSKYPTELRIEKFYPPYFD 172 (286)
Q Consensus 93 ~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~~~~~~~~~~~~~p~~~~vE~y~Ppyl~ 172 (286)
.....+.++|||.++ +|+.+++|+.+|..|+.+++ +++|||.||...... ...+|+|+|..-.
T Consensus 161 --~~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~----------~~~~~~yd~~~~~ 223 (315)
T 4asc_A 161 --RKCLNKMCVYDPKKF---EWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGL----------TSSAEVYSITDNK 223 (315)
T ss_dssp --SCBCCCEEEEETTTT---EEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSE----------EEEEEEEETTTTE
T ss_pred --CcccceEEEEeCCCC---eEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCc----------cceEEEEECCCCe
Confidence 123557899999999 99999999999999998877 999999999644321 3479999998753
No 3
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.58 E-value=1.9e-14 Score=129.55 Aligned_cols=127 Identities=17% Similarity=0.254 Sum_probs=100.5
Q ss_pred CccEEEEEcCCCCCCCcccCCCccccccCcEEEEEecCCCCCeEee-cCCCCccccceEEeCCCcEEEEcCccCCCCCcc
Q 043381 14 IRAEVLICGGAKPEAGMLAGKGEFMNALQDCGRIEITNKSATWQRE-MMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWN 92 (286)
Q Consensus 14 ~~~~Vlv~GG~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~~~R~~~~~v~LpdG~VlvvGG~~~g~ag~~ 92 (286)
.+++|+++||.+.+ ...++++++||+. +++|+.. +|+.+|..|.++++ +|+|||+||.....
T Consensus 100 ~~~~iyv~GG~~~~----------~~~~~~~~~~d~~--~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~---- 162 (306)
T 3ii7_A 100 AEGKIYTSGGSEVG----------NSALYLFECYDTR--TESWHTKPSMLTQRCSHGMVEA-NGLIYVCGGSLGNN---- 162 (306)
T ss_dssp ETTEEEEECCBBTT----------BSCCCCEEEEETT--TTEEEEECCCSSCCBSCEEEEE-TTEEEEECCEESCT----
T ss_pred ECCEEEEECCCCCC----------CcEeeeEEEEeCC--CCceEeCCCCcCCcceeEEEEE-CCEEEEECCCCCCC----
Confidence 47899999997521 1357899999987 4899998 99999999998777 99999999976211
Q ss_pred CCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCCCCCCcccCCCCCCCcccEEEEEeCCCCC
Q 043381 93 FATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPHSRYNLTSGSKYPTELRIEKFYPPYFD 172 (286)
Q Consensus 93 ~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~~~~~~~~~~~~~p~~~~vE~y~Ppyl~ 172 (286)
.........++|||.++ +|+.+++++.+|..|+.+++ +++||+.||...... ...+|+|+|....
T Consensus 163 ~~~~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~----------~~~~~~yd~~~~~ 227 (306)
T 3ii7_A 163 VSGRVLNSCEVYDPATE---TWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGG----------LDNVEYYDIKLNE 227 (306)
T ss_dssp TTCEECCCEEEEETTTT---EEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEE----------BCCEEEEETTTTE
T ss_pred CcccccceEEEeCCCCC---eEEECCCccchhhcceEEEE--CCEEEEEeCCCCCCC----------CceEEEeeCCCCc
Confidence 00012457899999999 99999999999999987777 999999999543321 2369999998753
No 4
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.57 E-value=3.5e-14 Score=128.63 Aligned_cols=122 Identities=16% Similarity=0.211 Sum_probs=99.8
Q ss_pred CccEEEEEcCCCCCCCcccCCCccccccCcEEEEEecCCCCCeEee-cCCCCccccceEEeCCCcEEEEcCccCCCCCcc
Q 043381 14 IRAEVLICGGAKPEAGMLAGKGEFMNALQDCGRIEITNKSATWQRE-MMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWN 92 (286)
Q Consensus 14 ~~~~Vlv~GG~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~~~R~~~~~v~LpdG~VlvvGG~~~g~ag~~ 92 (286)
.+++|+++||.... ..++++++||+. +++|+.. +|+.+|..|.++++ +++|||+||... .
T Consensus 167 ~~~~iyv~GG~~~~-----------~~~~~~~~yd~~--~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~-~---- 227 (308)
T 1zgk_A 167 LNRLLYAVGGFDGT-----------NRLNSAECYYPE--RNEWRMITAMNTIRSGAGVCVL-HNCIYAAGGYDG-Q---- 227 (308)
T ss_dssp ETTEEEEECCBCSS-----------CBCCCEEEEETT--TTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCS-S----
T ss_pred ECCEEEEEeCCCCC-----------CcCceEEEEeCC--CCeEeeCCCCCCccccceEEEE-CCEEEEEeCCCC-C----
Confidence 47899999997621 137889999987 5899988 99999999998887 999999999762 1
Q ss_pred CCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCCCCCCcccCCCCCCCcccEEEEEeCCCCC
Q 043381 93 FATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPHSRYNLTSGSKYPTELRIEKFYPPYFD 172 (286)
Q Consensus 93 ~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~~~~~~~~~~~~~p~~~~vE~y~Ppyl~ 172 (286)
......++|||+++ +|+.+++++.+|..|+.+++ +++|||.||...... ..++|+|+|....
T Consensus 228 ---~~~~~v~~yd~~~~---~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~----------~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 228 ---DQLNSVERYDVETE---TWTFVAPMKHRRSALGITVH--QGRIYVLGGYDGHTF----------LDSVECYDPDTDT 289 (308)
T ss_dssp ---SBCCCEEEEETTTT---EEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCB----------CCEEEEEETTTTE
T ss_pred ---CccceEEEEeCCCC---cEEECCCCCCCccceEEEEE--CCEEEEEcCcCCCcc----------cceEEEEcCCCCE
Confidence 12456899999999 99999999999999998877 999999999543321 2379999998753
No 5
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.57 E-value=2.5e-14 Score=128.64 Aligned_cols=124 Identities=15% Similarity=0.219 Sum_probs=99.4
Q ss_pred CccEEEEEcCCCCCCCcccCCCccccccCcEEEEEecCCCCCeEee-cCCCCccccceEEeCCCcEEEEcCccCCCCCcc
Q 043381 14 IRAEVLICGGAKPEAGMLAGKGEFMNALQDCGRIEITNKSATWQRE-MMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWN 92 (286)
Q Consensus 14 ~~~~Vlv~GG~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~~~R~~~~~v~LpdG~VlvvGG~~~g~ag~~ 92 (286)
.+++|+++||..... ...++++++||+. +++|+.. +|+.+|..|.++++ +++|||+||... .
T Consensus 154 ~~~~iyv~GG~~~~~---------~~~~~~~~~yd~~--~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~-~---- 216 (302)
T 2xn4_A 154 VGGLLYAVGGYDVAS---------RQCLSTVECYNAT--TNEWTYIAEMSTRRSGAGVGVL-NNLLYAVGGHDG-P---- 216 (302)
T ss_dssp ETTEEEEECCEETTT---------TEECCCEEEEETT--TTEEEEECCCSSCCBSCEEEEE-TTEEEEECCBSS-S----
T ss_pred ECCEEEEEeCCCCCC---------CccccEEEEEeCC--CCcEEECCCCccccccccEEEE-CCEEEEECCCCC-C----
Confidence 478999999975211 1347889999987 4899998 99999999987777 999999999752 1
Q ss_pred CCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCCCCCCcccCCCCCCCcccEEEEEeCCCCC
Q 043381 93 FATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPHSRYNLTSGSKYPTELRIEKFYPPYFD 172 (286)
Q Consensus 93 ~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~~~~~~~~~~~~~p~~~~vE~y~Ppyl~ 172 (286)
....+.++|||+++ +|+.+++++.+|..|+.+++ +++||+.||...... ..++|+|+|....
T Consensus 217 ---~~~~~~~~yd~~~~---~W~~~~~~~~~r~~~~~~~~--~~~i~v~GG~~~~~~----------~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 217 ---LVRKSVEVYDPTTN---AWRQVADMNMCRRNAGVCAV--NGLLYVVGGDDGSCN----------LASVEYYNPTTDK 278 (302)
T ss_dssp ---SBCCCEEEEETTTT---EEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSB----------CCCEEEEETTTTE
T ss_pred ---cccceEEEEeCCCC---CEeeCCCCCCccccCeEEEE--CCEEEEECCcCCCcc----------cccEEEEcCCCCe
Confidence 12346899999999 99999999999999987776 999999999643321 2379999998753
No 6
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.56 E-value=4.6e-14 Score=127.12 Aligned_cols=126 Identities=16% Similarity=0.203 Sum_probs=100.3
Q ss_pred CccEEEEEcCCCCCCCcccCCCccccccCcEEEEEecCCCCCeEee-cCCCCccccceEEeCCCcEEEEcCccCCCCCcc
Q 043381 14 IRAEVLICGGAKPEAGMLAGKGEFMNALQDCGRIEITNKSATWQRE-MMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWN 92 (286)
Q Consensus 14 ~~~~Vlv~GG~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~~~R~~~~~v~LpdG~VlvvGG~~~g~ag~~ 92 (286)
.+++|+++||.. . ..++++++||+. +++|+.. +|+.+|..|.++++ +|+|||+||.+.+
T Consensus 54 ~~~~lyv~GG~~-~-----------~~~~~~~~~d~~--~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~----- 113 (306)
T 3ii7_A 54 WDNVVYILGGSQ-L-----------FPIKRMDCYNVV--KDSWYSKLGPPTPRDSLAACAA-EGKIYTSGGSEVG----- 113 (306)
T ss_dssp ETTEEEEECCBS-S-----------SBCCEEEEEETT--TTEEEEEECCSSCCBSCEEEEE-TTEEEEECCBBTT-----
T ss_pred ECCEEEEEeCCC-C-----------CCcceEEEEeCC--CCeEEECCCCCccccceeEEEE-CCEEEEECCCCCC-----
Confidence 367899999975 1 356889999987 4899988 99999999998877 9999999997521
Q ss_pred CCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCCCCCCcccCCCCCCCcccEEEEEeCCCCC
Q 043381 93 FATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPHSRYNLTSGSKYPTELRIEKFYPPYFD 172 (286)
Q Consensus 93 ~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~~~~~~~~~~~~~p~~~~vE~y~Ppyl~ 172 (286)
.....+.++|||.++ +|+.+++++.+|..|+.+++ +++||+.||........ . ....+|+|+|....
T Consensus 114 --~~~~~~~~~~d~~~~---~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~----~--~~~~~~~yd~~~~~ 180 (306)
T 3ii7_A 114 --NSALYLFECYDTRTE---SWHTKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSG----R--VLNSCEVYDPATET 180 (306)
T ss_dssp --BSCCCCEEEEETTTT---EEEEECCCSSCCBSCEEEEE--TTEEEEECCEESCTTTC----E--ECCCEEEEETTTTE
T ss_pred --CcEeeeEEEEeCCCC---ceEeCCCCcCCcceeEEEEE--CCEEEEECCCCCCCCcc----c--ccceEEEeCCCCCe
Confidence 124557899999999 99999999999999988776 99999999964432100 0 02379999998764
No 7
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.56 E-value=5.1e-14 Score=126.28 Aligned_cols=121 Identities=17% Similarity=0.258 Sum_probs=98.7
Q ss_pred CccEEEEEcCCCCCCCcccCCCccccccCcEEEEEecCCCCCeEee-cCCCCccccceEEeCCCcEEEEcCccCCCCCcc
Q 043381 14 IRAEVLICGGAKPEAGMLAGKGEFMNALQDCGRIEITNKSATWQRE-MMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWN 92 (286)
Q Consensus 14 ~~~~Vlv~GG~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~~~R~~~~~v~LpdG~VlvvGG~~~g~ag~~ 92 (286)
.+++|+++||.+.. ..++++++||+. +.+|+.. +|+.+|..|.++++ +++|||+||... .
T Consensus 158 ~~~~iyv~GG~~~~-----------~~~~~~~~~d~~--~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~-~---- 218 (301)
T 2vpj_A 158 ASGVIYCLGGYDGL-----------NILNSVEKYDPH--TGHWTNVTPMATKRSGAGVALL-NDHIYVVGGFDG-T---- 218 (301)
T ss_dssp ETTEEEEECCBCSS-----------CBCCCEEEEETT--TTEEEEECCCSSCCBSCEEEEE-TTEEEEECCBCS-S----
T ss_pred ECCEEEEECCCCCC-----------cccceEEEEeCC--CCcEEeCCCCCcccccceEEEE-CCEEEEEeCCCC-C----
Confidence 47899999997521 257889999987 4899988 99999999987777 999999999762 1
Q ss_pred CCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCCCCCCcccCCCCCCCcccEEEEEeCCCC
Q 043381 93 FATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPHSRYNLTSGSKYPTELRIEKFYPPYF 171 (286)
Q Consensus 93 ~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~~~~~~~~~~~~~p~~~~vE~y~Ppyl 171 (286)
....+.++|||+++ +|+.+++++.+|.+|+.+++ +++||+.||..... ...++|+|+|...
T Consensus 219 ---~~~~~v~~yd~~~~---~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~----------~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 219 ---AHLSSVEAYNIRTD---SWTTVTSMTTPRCYVGATVL--RGRLYAIAGYDGNS----------LLSSIECYDPIID 279 (301)
T ss_dssp ---SBCCCEEEEETTTT---EEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSS----------BEEEEEEEETTTT
T ss_pred ---cccceEEEEeCCCC---cEEECCCCCCcccceeEEEE--CCEEEEEcCcCCCc----------ccccEEEEcCCCC
Confidence 12446789999999 99999999999999987776 99999999954332 1347999999864
No 8
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.56 E-value=2.1e-14 Score=130.42 Aligned_cols=126 Identities=16% Similarity=0.308 Sum_probs=100.4
Q ss_pred CccEEEEEcCCCCCCCcccCCCccccccCcEEEEEecCCCCCeEee-cCCCCccccceEEeCCCcEEEEcCccCCCCCcc
Q 043381 14 IRAEVLICGGAKPEAGMLAGKGEFMNALQDCGRIEITNKSATWQRE-MMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWN 92 (286)
Q Consensus 14 ~~~~Vlv~GG~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~~~R~~~~~v~LpdG~VlvvGG~~~g~ag~~ 92 (286)
.+++|+++||..... ...++++++||+. +++|+.. +||.+|..|.++++ +|+|||+||...+
T Consensus 108 ~~~~iyv~GG~~~~~---------~~~~~~~~~yd~~--~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~----- 170 (318)
T 2woz_A 108 VDDKIYVVAGKDLQT---------EASLDSVLCYDPV--AAKWSEVKNLPIKVYGHNVISH-NGMIYCLGGKTDD----- 170 (318)
T ss_dssp ETTEEEEEEEEBTTT---------CCEEEEEEEEETT--TTEEEEECCCSSCEESCEEEEE-TTEEEEECCEESS-----
T ss_pred ECCEEEEEcCccCCC---------CcccceEEEEeCC--CCCEeECCCCCCcccccEEEEE-CCEEEEEcCCCCC-----
Confidence 367999999975211 1357889999987 5899988 99999999987775 9999999997522
Q ss_pred CCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCCCCCCcccCCCCCCCcccEEEEEeCCCCC
Q 043381 93 FATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPHSRYNLTSGSKYPTELRIEKFYPPYFD 172 (286)
Q Consensus 93 ~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~~~~~~~~~~~~~p~~~~vE~y~Ppyl~ 172 (286)
.....+.++|||.++ +|+.+++++.+|..|+++++ +++|||.||...... ..++|+|+|....
T Consensus 171 --~~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~----------~~~~~~yd~~~~~ 233 (318)
T 2woz_A 171 --KKCTNRVFIYNPKKG---DWKDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGL----------SASVEAFDLKTNK 233 (318)
T ss_dssp --SCBCCCEEEEETTTT---EEEEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEE----------EEEEEEEETTTCC
T ss_pred --CCccceEEEEcCCCC---EEEECCCCCCCcccceEEEE--CCEEEEEcCcCCCCc----------cceEEEEECCCCe
Confidence 123456899999999 99999999999999988776 999999999543321 3479999998764
Q ss_pred C
Q 043381 173 E 173 (286)
Q Consensus 173 ~ 173 (286)
.
T Consensus 234 W 234 (318)
T 2woz_A 234 W 234 (318)
T ss_dssp E
T ss_pred E
Confidence 3
No 9
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.56 E-value=2.4e-14 Score=128.70 Aligned_cols=123 Identities=14% Similarity=0.185 Sum_probs=98.8
Q ss_pred ccEEEEEcCCCCCCCcccCCCccccccCcEEEEEecCCCCCeEee-cCCCCccccceEEeCCCcEEEEcCccCCCCCccC
Q 043381 15 RAEVLICGGAKPEAGMLAGKGEFMNALQDCGRIEITNKSATWQRE-MMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNF 93 (286)
Q Consensus 15 ~~~Vlv~GG~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~~~R~~~~~v~LpdG~VlvvGG~~~g~ag~~~ 93 (286)
+++|+++||.... ..++++++||+. +.+|+.. +|+.+|..|.++++ +|+|||+||....
T Consensus 61 ~~~lyv~GG~~~~-----------~~~~~~~~~d~~--~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~------ 120 (302)
T 2xn4_A 61 AGLVFAVGGFNGS-----------LRVRTVDSYDPV--KDQWTSVANMRDRRSTLGAAVL-NGLLYAVGGFDGS------ 120 (302)
T ss_dssp TTEEEEESCBCSS-----------SBCCCEEEEETT--TTEEEEECCCSSCCBSCEEEEE-TTEEEEEEEECSS------
T ss_pred CCEEEEEeCcCCC-----------ccccceEEECCC--CCceeeCCCCCccccceEEEEE-CCEEEEEcCCCCC------
Confidence 6799999997521 246889999987 5899998 99999999998877 9999999997521
Q ss_pred CCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCCCCCCcccCCCCCCCcccEEEEEeCCCCC
Q 043381 94 ATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPHSRYNLTSGSKYPTELRIEKFYPPYFD 172 (286)
Q Consensus 94 ~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~~~~~~~~~~~~~p~~~~vE~y~Ppyl~ 172 (286)
....+.++|||.++ +|+.+++++.+|..|+.+++ +++||+.||....... ....+|+|+|....
T Consensus 121 --~~~~~~~~~d~~~~---~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~--------~~~~~~~yd~~~~~ 184 (302)
T 2xn4_A 121 --TGLSSVEAYNIKSN---EWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQ--------CLSTVECYNATTNE 184 (302)
T ss_dssp --CEEEEEEEEETTTT---EEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTE--------ECCCEEEEETTTTE
T ss_pred --ccCceEEEEeCCCC---eEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCc--------cccEEEEEeCCCCc
Confidence 23446899999999 99999999999999988877 9999999996433210 02369999998753
No 10
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.56 E-value=5.7e-14 Score=127.24 Aligned_cols=122 Identities=16% Similarity=0.180 Sum_probs=99.9
Q ss_pred CccEEEEEcCCCCCCCcccCCCccccccCcEEEEEecCCCCCeEee-cCCCCccccceEEeCCCcEEEEcCccCCCCCcc
Q 043381 14 IRAEVLICGGAKPEAGMLAGKGEFMNALQDCGRIEITNKSATWQRE-MMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWN 92 (286)
Q Consensus 14 ~~~~Vlv~GG~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~~~R~~~~~v~LpdG~VlvvGG~~~g~ag~~ 92 (286)
.+++|+++||.... ..++++++||+. +++|+.. +|+.+|..|.++++ +++|||+||... .
T Consensus 120 ~~~~iyv~GG~~~~-----------~~~~~~~~yd~~--~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~-~---- 180 (308)
T 1zgk_A 120 IDGHIYAVGGSHGC-----------IHHNSVERYEPE--RDEWHLVAPMLTRRIGVGVAVL-NRLLYAVGGFDG-T---- 180 (308)
T ss_dssp ETTEEEEECCEETT-----------EECCCEEEEETT--TTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCS-S----
T ss_pred ECCEEEEEcCCCCC-----------cccccEEEECCC--CCeEeECCCCCccccceEEEEE-CCEEEEEeCCCC-C----
Confidence 37899999997521 357889999987 5899998 99999999998887 999999999762 1
Q ss_pred CCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCCCCCCcccCCCCCCCcccEEEEEeCCCCC
Q 043381 93 FATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPHSRYNLTSGSKYPTELRIEKFYPPYFD 172 (286)
Q Consensus 93 ~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~~~~~~~~~~~~~p~~~~vE~y~Ppyl~ 172 (286)
......++|||.++ +|+.+++++.+|..|+.+++ +++|||.||...... ..++|+|+|....
T Consensus 181 ---~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~----------~~~v~~yd~~~~~ 242 (308)
T 1zgk_A 181 ---NRLNSAECYYPERN---EWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQ----------LNSVERYDVETET 242 (308)
T ss_dssp ---CBCCCEEEEETTTT---EEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSB----------CCCEEEEETTTTE
T ss_pred ---CcCceEEEEeCCCC---eEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCc----------cceEEEEeCCCCc
Confidence 12456899999999 99999999999999987776 999999999653321 2379999998753
No 11
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.55 E-value=8.7e-14 Score=124.76 Aligned_cols=122 Identities=14% Similarity=0.236 Sum_probs=99.5
Q ss_pred CccEEEEEcCCCCCCCcccCCCccccccCcEEEEEecCCCCCeEee-cCCCCccccceEEeCCCcEEEEcCccCCCCCcc
Q 043381 14 IRAEVLICGGAKPEAGMLAGKGEFMNALQDCGRIEITNKSATWQRE-MMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWN 92 (286)
Q Consensus 14 ~~~~Vlv~GG~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~~~R~~~~~v~LpdG~VlvvGG~~~g~ag~~ 92 (286)
.+++|+++||.... ..++++++||+. +++|+.. +|+.+|..|.++++ +|+|||+||... .
T Consensus 111 ~~~~lyv~GG~~~~-----------~~~~~~~~~d~~--~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~-~---- 171 (301)
T 2vpj_A 111 LGDMIYVSGGFDGS-----------RRHTSMERYDPN--IDQWSMLGDMQTAREGAGLVVA-SGVIYCLGGYDG-L---- 171 (301)
T ss_dssp ETTEEEEECCBCSS-----------CBCCEEEEEETT--TTEEEEEEECSSCCBSCEEEEE-TTEEEEECCBCS-S----
T ss_pred ECCEEEEEcccCCC-----------cccceEEEEcCC--CCeEEECCCCCCCcccceEEEE-CCEEEEECCCCC-C----
Confidence 36899999998621 247889999987 5899988 99999999998777 999999999752 1
Q ss_pred CCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCCCCCCcccCCCCCCCcccEEEEEeCCCCC
Q 043381 93 FATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPHSRYNLTSGSKYPTELRIEKFYPPYFD 172 (286)
Q Consensus 93 ~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~~~~~~~~~~~~~p~~~~vE~y~Ppyl~ 172 (286)
......++|||.++ +|+.+++++.+|..|+.+++ +++||+.||...... ..++|+|+|....
T Consensus 172 ---~~~~~~~~~d~~~~---~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~----------~~~v~~yd~~~~~ 233 (301)
T 2vpj_A 172 ---NILNSVEKYDPHTG---HWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAH----------LSSVEAYNIRTDS 233 (301)
T ss_dssp ---CBCCCEEEEETTTT---EEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSB----------CCCEEEEETTTTE
T ss_pred ---cccceEEEEeCCCC---cEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcc----------cceEEEEeCCCCc
Confidence 23456899999999 99999999999999987777 999999999654321 2369999998753
No 12
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.53 E-value=3.6e-14 Score=128.92 Aligned_cols=131 Identities=13% Similarity=0.160 Sum_probs=99.7
Q ss_pred CccEEEEEcCCCCCCCcccCCCccccccCcEEEEEecCCCCCeEee-cCCCCccccceEEeCCCcEEEEcCccCCCCCcc
Q 043381 14 IRAEVLICGGAKPEAGMLAGKGEFMNALQDCGRIEITNKSATWQRE-MMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWN 92 (286)
Q Consensus 14 ~~~~Vlv~GG~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~~~R~~~~~v~LpdG~VlvvGG~~~g~ag~~ 92 (286)
.+++|+++||...+ ...++++++||+. +++|+.. +|+.+|..|.++++ +|+|||+||....
T Consensus 157 ~~~~iyv~GG~~~~----------~~~~~~~~~yd~~--~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~----- 218 (318)
T 2woz_A 157 HNGMIYCLGGKTDD----------KKCTNRVFIYNPK--KGDWKDLAPMKTPRSMFGVAIH-KGKIVIAGGVTED----- 218 (318)
T ss_dssp ETTEEEEECCEESS----------SCBCCCEEEEETT--TTEEEEECCCSSCCBSCEEEEE-TTEEEEEEEEETT-----
T ss_pred ECCEEEEEcCCCCC----------CCccceEEEEcCC--CCEEEECCCCCCCcccceEEEE-CCEEEEEcCcCCC-----
Confidence 47899999997421 1357889999997 4899998 99999999998777 9999999997621
Q ss_pred CCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCCCCCCcccCCCCC-CCcccEEEEEeCCCC
Q 043381 93 FATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPHSRYNLTSGSK-YPTELRIEKFYPPYF 171 (286)
Q Consensus 93 ~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~~~~~~~~~~~~-~p~~~~vE~y~Ppyl 171 (286)
......++|||+++ +|+.+++++.+|..|+.+++ +++||+.||........ +.. ......+++|+|...
T Consensus 219 ---~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~--~~~~~~~~~~v~~yd~~~~ 288 (318)
T 2woz_A 219 ---GLSASVEAFDLKTN---KWEVMTEFPQERSSISLVSL--AGSLYAIGGFAMIQLES--KEFAPTEVNDIWKYEDDKK 288 (318)
T ss_dssp ---EEEEEEEEEETTTC---CEEECCCCSSCCBSCEEEEE--TTEEEEECCBCCBC------CCBCCBCCCEEEEETTTT
T ss_pred ---CccceEEEEECCCC---eEEECCCCCCcccceEEEEE--CCEEEEECCeeccCCCC--ceeccceeeeEEEEeCCCC
Confidence 12336789999999 99999999999999987776 89999999965432100 000 001347999999875
Q ss_pred C
Q 043381 172 D 172 (286)
Q Consensus 172 ~ 172 (286)
.
T Consensus 289 ~ 289 (318)
T 2woz_A 289 E 289 (318)
T ss_dssp E
T ss_pred E
Confidence 4
No 13
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.53 E-value=1.3e-13 Score=125.04 Aligned_cols=132 Identities=14% Similarity=0.167 Sum_probs=99.6
Q ss_pred CccEEEEEcCCCCCCCcccCCCccccccCcEEEEEecCCCCCeEee-cCCCCccccceEEeCCCcEEEEcCccCCCCCcc
Q 043381 14 IRAEVLICGGAKPEAGMLAGKGEFMNALQDCGRIEITNKSATWQRE-MMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWN 92 (286)
Q Consensus 14 ~~~~Vlv~GG~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~~~R~~~~~v~LpdG~VlvvGG~~~g~ag~~ 92 (286)
.+++|+++||..... ........+.+.+||+. +.+|+.. +||.+|..|.++++ +++|||+||.....
T Consensus 44 ~~~~iyv~GG~~~~~-----~~~~~~~~~~~~~~d~~--~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~---- 111 (315)
T 4asc_A 44 KENQVFVAGGLFYNE-----DNKEDPMSAYFLQFDHL--DSEWLGMPPLPSPRCLFGLGEA-LNSIYVVGGREIKD---- 111 (315)
T ss_dssp TTCCEEEEEEEEECS-----SCSSSCEEEEEEEEETT--TTEEEECCCBSSCEESCEEEEE-TTEEEEECCEESST----
T ss_pred ECCEEEEEcCcccCC-----CCCccccccceEEecCC--CCeEEECCCCCcchhceeEEEE-CCEEEEEeCCcCCC----
Confidence 478999999962100 00112345568899987 4899988 99999999998877 99999999975210
Q ss_pred CCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCCCCCCcccCCCCCCCcccEEEEEeCCCCC
Q 043381 93 FATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPHSRYNLTSGSKYPTELRIEKFYPPYFD 172 (286)
Q Consensus 93 ~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~~~~~~~~~~~~~p~~~~vE~y~Ppyl~ 172 (286)
......+.++|||.++ +|+.+++++.+|..|+++++ +++|||.||...... ....+|+|+|....
T Consensus 112 -~~~~~~~~~~~d~~~~---~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~---------~~~~~~~yd~~~~~ 176 (315)
T 4asc_A 112 -GERCLDSVMCYDRLSF---KWGESDPLPYVVYGHTVLSH--MDLVYVIGGKGSDRK---------CLNKMCVYDPKKFE 176 (315)
T ss_dssp -TCCBCCCEEEEETTTT---EEEECCCCSSCCBSCEEEEE--TTEEEEECCBCTTSC---------BCCCEEEEETTTTE
T ss_pred -CCcccceEEEECCCCC---cEeECCCCCCcccceeEEEE--CCEEEEEeCCCCCCc---------ccceEEEEeCCCCe
Confidence 1234557899999999 99999999999999988776 999999999633221 12379999998753
No 14
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.47 E-value=1.8e-13 Score=137.29 Aligned_cols=125 Identities=14% Similarity=0.155 Sum_probs=94.8
Q ss_pred ccEEEEEcCCCCCCCcccCCCccccccCcEEEEEecCCCCCeEee-cCCCCccccc--eEEeCCCcEEEEcCccCCCCCc
Q 043381 15 RAEVLICGGAKPEAGMLAGKGEFMNALQDCGRIEITNKSATWQRE-MMPSPRVMGE--MLLLPTGDVLIINGAKKGTAGW 91 (286)
Q Consensus 15 ~~~Vlv~GG~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~~~R~~~~--~v~LpdG~VlvvGG~~~g~ag~ 91 (286)
+++||++||.....+.. ....+..+.+||+. +++|+.. .|+.+|..++ +++++||+|||+||...
T Consensus 197 ~g~l~v~GG~~~~~~~~-----~~~~~~~~~~yd~~--t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~----- 264 (656)
T 1k3i_A 197 SGRVLMWSSYRNDAFGG-----SPGGITLTSSWDPS--TGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDA----- 264 (656)
T ss_dssp TTEEEEEEECCCTTTCS-----CCCSEEEEEEECTT--TCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSST-----
T ss_pred CCEEEEEeccccccccc-----CCCCeEEEEEEeCC--CCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCC-----
Confidence 78999999986433221 01234567889987 5899987 8988887665 57789999999999651
Q ss_pred cCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCCCCCCcccCCCCCCCcccEEEEEeCCCC
Q 043381 92 NFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPHSRYNLTSGSKYPTELRIEKFYPPYF 171 (286)
Q Consensus 92 ~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~~~~~~~~~~~~~p~~~~vE~y~Ppyl 171 (286)
.+.++|||.++ +|+.+++|+.+|.||+ ++.++||+|||.||...... . ..++|+|+|..-
T Consensus 265 -------~~v~~yd~~t~---~W~~~~~~~~~R~~~s-~~~~~dg~iyv~GG~~~~~~-------~--~~~~e~yd~~t~ 324 (656)
T 1k3i_A 265 -------KKTSLYDSSSD---SWIPGPDMQVARGYQS-SATMSDGRVFTIGGSWSGGV-------F--EKNGEVYSPSSK 324 (656)
T ss_dssp -------TCEEEEEGGGT---EEEECCCCSSCCSSCE-EEECTTSCEEEECCCCCSSS-------C--CCCEEEEETTTT
T ss_pred -------CceEEecCcCC---ceeECCCCCccccccc-eEEecCCeEEEEeCcccCCc-------c--cccceEeCCCCC
Confidence 15799999999 9999999999999997 45568999999999422211 1 236999999763
No 15
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.47 E-value=3.5e-13 Score=123.85 Aligned_cols=107 Identities=21% Similarity=0.310 Sum_probs=86.5
Q ss_pred ccEEEEEcCCCCCCCcccCCCccccccCcEEEEEecCCCCCeEee-cCC-CCccccceEEeCCCcEEEEcCccC-CCCCc
Q 043381 15 RAEVLICGGAKPEAGMLAGKGEFMNALQDCGRIEITNKSATWQRE-MMP-SPRVMGEMLLLPTGDVLIINGAKK-GTAGW 91 (286)
Q Consensus 15 ~~~Vlv~GG~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~-~~R~~~~~v~LpdG~VlvvGG~~~-g~ag~ 91 (286)
.++|+|+||.. .+++.+||+...+.+|+.. +|| .+|..|.++++ +|+|||+||... +..
T Consensus 19 ~~~iyv~GG~~---------------~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~-~~~lyv~GG~~~~~~~-- 80 (357)
T 2uvk_A 19 NDTVYIGLGSA---------------GTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI-DGNLYVFGGIGKNSEG-- 80 (357)
T ss_dssp TTEEEEECGGG---------------TTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE-TTEEEEECCEEECTTS--
T ss_pred CCEEEEEeCcC---------------CCeEEEEccccCCCCeeECCCCCCCcCccceEEEE-CCEEEEEcCCCCCCCc--
Confidence 78899999964 1367899987556899998 999 89999998877 999999999721 110
Q ss_pred cCCCCCCCccEEecCCCCCCCceEEcCCCC-CCCccceeeEEcCCCcEEEeCCCCC
Q 043381 92 NFATDPNTTPVLYEPNDPINERFSELTPTS-KPRMCHSTSVVLPDGKILVAGSNPH 146 (286)
Q Consensus 92 ~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~-~~R~yHS~A~LLpDGrVlv~GG~~~ 146 (286)
......+.++|||.++ +|+.+++|. .+|..|+++++ +++|||.||...
T Consensus 81 --~~~~~~~v~~yd~~~~---~W~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~ 129 (357)
T 2uvk_A 81 --LTQVFNDVHKYNPKTN---SWVKLMSHAPMGMAGHVTFVH--NGKAYVTGGVNQ 129 (357)
T ss_dssp --CEEECCCEEEEETTTT---EEEECSCCCSSCCSSEEEEEE--TTEEEEEECCCH
T ss_pred --cceeeccEEEEeCCCC---cEEECCCCCCcccccceEEEE--CCEEEEEeCcCC
Confidence 1123457899999999 999999999 99999987775 999999999643
No 16
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.43 E-value=1.2e-12 Score=133.13 Aligned_cols=120 Identities=18% Similarity=0.319 Sum_probs=97.4
Q ss_pred ccEEEEEcCCCCCCCcccCCCccccccCcEEEEEecCCCCCeEeec-------CCCCccccceEEeC-CCcEEEEcCccC
Q 043381 15 RAEVLICGGAKPEAGMLAGKGEFMNALQDCGRIEITNKSATWQREM-------MPSPRVMGEMLLLP-TGDVLIINGAKK 86 (286)
Q Consensus 15 ~~~Vlv~GG~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~~-------M~~~R~~~~~v~Lp-dG~VlvvGG~~~ 86 (286)
.++|+++||... ..++++.+||+. +++|+..+ |+.+|..|+++++. +|+|||+||...
T Consensus 397 ~~~iyv~GG~~~------------~~~~~v~~yd~~--~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~ 462 (695)
T 2zwa_A 397 GNDVFYMGGSNP------------YRVNEILQLSIH--YDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKA 462 (695)
T ss_dssp SSCEEEECCBSS------------SBCCCEEEEEEC--SSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSS
T ss_pred CCEEEEECCCCC------------CCcCcEEEEECC--CCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCC
Confidence 578999999752 246789999997 48999753 89999999999998 999999999762
Q ss_pred CCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCCCCCCcccCCCCCCCcccEEEEE
Q 043381 87 GTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPHSRYNLTSGSKYPTELRIEKF 166 (286)
Q Consensus 87 g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~~~~~~~~~~~~~p~~~~vE~y 166 (286)
. ..+..+.++|||.++ +|+.+++|+.+|.+|+.++ +.+|+|||.||.... . .+|+|
T Consensus 463 ~-------~~~~~dv~~yd~~t~---~W~~~~~~p~~R~~h~~~~-~~~~~iyv~GG~~~~------------~-~v~~y 518 (695)
T 2zwa_A 463 P-------HQGLSDNWIFDMKTR---EWSMIKSLSHTRFRHSACS-LPDGNVLILGGVTEG------------P-AMLLY 518 (695)
T ss_dssp T-------TCBCCCCEEEETTTT---EEEECCCCSBCCBSCEEEE-CTTSCEEEECCBCSS------------C-SEEEE
T ss_pred C-------CCccccEEEEeCCCC---cEEECCCCCCCcccceEEE-EcCCEEEEECCCCCC------------C-CEEEE
Confidence 1 124557899999999 9999999999999997555 459999999995332 1 68999
Q ss_pred eCCCCC
Q 043381 167 YPPYFD 172 (286)
Q Consensus 167 ~Ppyl~ 172 (286)
+|..-.
T Consensus 519 d~~t~~ 524 (695)
T 2zwa_A 519 NVTEEI 524 (695)
T ss_dssp ETTTTE
T ss_pred ECCCCc
Confidence 998753
No 17
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.42 E-value=1.1e-12 Score=133.49 Aligned_cols=124 Identities=19% Similarity=0.281 Sum_probs=99.5
Q ss_pred ccEEEEEcCCCCCCCcccCCCccccccCcEEEEEecCCCCCeEee-cCCCCccccceEEeCCCcEEEEcCccCCCCCccC
Q 043381 15 RAEVLICGGAKPEAGMLAGKGEFMNALQDCGRIEITNKSATWQRE-MMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNF 93 (286)
Q Consensus 15 ~~~Vlv~GG~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~~~R~~~~~v~LpdG~VlvvGG~~~g~ag~~~ 93 (286)
+++|+|+||..... ..++++++||+. +++|+.. +|+.+|..|.++++.+|+|||+||... .
T Consensus 451 ~~~lyv~GG~~~~~----------~~~~dv~~yd~~--t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~-~----- 512 (695)
T 2zwa_A 451 NNQLLLIGGRKAPH----------QGLSDNWIFDMK--TREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTE-G----- 512 (695)
T ss_dssp TTEEEEECCBSSTT----------CBCCCCEEEETT--TTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCS-S-----
T ss_pred CCEEEEEcCCCCCC----------CccccEEEEeCC--CCcEEECCCCCCCcccceEEEEcCCEEEEECCCCC-C-----
Confidence 78999999986211 257889999987 4899998 999999999988888999999999752 1
Q ss_pred CCCCCCccEEecCCCCCCCceEEcCC---CCCCCccceeeEEcCC-CcEEEeCCCCCCCcccCCCCCCCcccEEEEEeCC
Q 043381 94 ATDPNTTPVLYEPNDPINERFSELTP---TSKPRMCHSTSVVLPD-GKILVAGSNPHSRYNLTSGSKYPTELRIEKFYPP 169 (286)
Q Consensus 94 ~~~~~~~~e~YdP~t~~g~~wt~~a~---~~~~R~yHS~A~LLpD-GrVlv~GG~~~~~~~~~~~~~~p~~~~vE~y~Pp 169 (286)
. ..++|||.++ +|+.+++ ++.+|..|+++++-.+ ++|||.||....... + ...+++|+|.
T Consensus 513 --~---~v~~yd~~t~---~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~------~--~~~v~~yd~~ 576 (695)
T 2zwa_A 513 --P---AMLLYNVTEE---IFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTT------V--SDKAIIFKYD 576 (695)
T ss_dssp --C---SEEEEETTTT---EEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSC------B--CCEEEEEEEC
T ss_pred --C---CEEEEECCCC---ceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCe------e--eCcEEEEEcc
Confidence 1 6899999999 9999987 8999999987776333 999999996443211 1 2379999998
Q ss_pred CCC
Q 043381 170 YFD 172 (286)
Q Consensus 170 yl~ 172 (286)
.-.
T Consensus 577 ~~~ 579 (695)
T 2zwa_A 577 AEN 579 (695)
T ss_dssp TTC
T ss_pred CCc
Confidence 764
No 18
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.35 E-value=2e-12 Score=118.83 Aligned_cols=118 Identities=10% Similarity=0.134 Sum_probs=81.2
Q ss_pred CccEEEEEcCCCCCCCcccCCCccccccCcEEEEEecCCCCCeEee-cCCCCc--cccceEEeCCCcEEEEcCccCCCCC
Q 043381 14 IRAEVLICGGAKPEAGMLAGKGEFMNALQDCGRIEITNKSATWQRE-MMPSPR--VMGEMLLLPTGDVLIINGAKKGTAG 90 (286)
Q Consensus 14 ~~~~Vlv~GG~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~~~R--~~~~~v~LpdG~VlvvGG~~~g~ag 90 (286)
.+++|+++||..... ..++...+||++..+.+|+.. +|+.+| ..|.++++ +++|||+||.......
T Consensus 199 ~~~~iyv~GG~~~~~----------~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~ 267 (357)
T 2uvk_A 199 KGDKTWLINGEAKPG----------LRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGIS-NDSLIFAGGAGFKGSR 267 (357)
T ss_dssp ETTEEEEECCEEETT----------EECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEEE-TTEEEEECCEECTTHH
T ss_pred ECCEEEEEeeecCCC----------cccCceEEEEecCCCCcEEecCCCCCCcccccceEEEE-CCEEEEEcCccccCCc
Confidence 468999999975211 245677888874446899988 887765 45555555 9999999997521100
Q ss_pred --------c-cCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCCCCC
Q 043381 91 --------W-NFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPHS 147 (286)
Q Consensus 91 --------~-~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~~~ 147 (286)
| ......+.+.++|||+++ +|+.+++++.+|.+|+.+++ +++|||.||....
T Consensus 268 ~~~~~g~~~~~~~~~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~ 328 (357)
T 2uvk_A 268 ENYQNGKNYAHEGLKKSYSTDIHLWHNG---KWDKSGELSQGRAYGVSLPW--NNSLLIIGGETAG 328 (357)
T ss_dssp HHHHTTCSSTTTTCCCEECCEEEECC------CEEEEECSSCCBSSEEEEE--TTEEEEEEEECGG
T ss_pred ccccccceeccccccceeeEEEEecCCC---ceeeCCCCCCCcccceeEEe--CCEEEEEeeeCCC
Confidence 0 001123456799999999 99999999999999987766 9999999996544
No 19
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=93.08 E-value=0.71 Score=40.60 Aligned_cols=93 Identities=20% Similarity=0.293 Sum_probs=58.3
Q ss_pred ccEEEEEcCCCCCCCcccCCCccccccCcEEEEEecCCCCCeEeecCCCCccccceEEeCCCcEEEEcCccCCCCCccCC
Q 043381 15 RAEVLICGGAKPEAGMLAGKGEFMNALQDCGRIEITNKSATWQREMMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFA 94 (286)
Q Consensus 15 ~~~Vlv~GG~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~~M~~~R~~~~~v~LpdG~VlvvGG~~~g~ag~~~~ 94 (286)
.+++|++|..+ .....+|..+..-.|+... ......++..++|||++|+.+. .
T Consensus 4 ~~~~lv~~~~~----------------~~v~~~d~~tG~~~w~~~~-~~~~~~~~~~~~pdG~ilvs~~-~--------- 56 (276)
T 3no2_A 4 PQHLLVGGSGW----------------NKIAIINKDTKEIVWEYPL-EKGWECNSVAATKAGEILFSYS-K--------- 56 (276)
T ss_dssp CCEEEEECTTC----------------SEEEEEETTTTEEEEEEEC-CTTCCCCEEEECTTSCEEEECB-S---------
T ss_pred CCcEEEeeCCC----------------CEEEEEECCCCeEEEEeCC-CccCCCcCeEECCCCCEEEeCC-C---------
Confidence 56888887754 2445778755556788752 1112345667899999999421 1
Q ss_pred CCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCC
Q 043381 95 TDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSN 144 (286)
Q Consensus 95 ~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~ 144 (286)
....||| +. ...|+.-.+. ....+.+..++||+++++.+.
T Consensus 57 -----~V~~~d~-~G-~~~W~~~~~~---~~~~~~~~~~~dG~~lv~~~~ 96 (276)
T 3no2_A 57 -----GAKMITR-DG-RELWNIAAPA---GCEMQTARILPDGNALVAWCG 96 (276)
T ss_dssp -----EEEEECT-TS-CEEEEEECCT---TCEEEEEEECTTSCEEEEEES
T ss_pred -----CEEEECC-CC-CEEEEEcCCC---CccccccEECCCCCEEEEecC
Confidence 2468999 43 1367654421 123345677899999999765
No 20
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=88.92 E-value=1.2 Score=39.69 Aligned_cols=98 Identities=15% Similarity=0.240 Sum_probs=56.3
Q ss_pred ccEEEEEcCCCCCCCcccCCCccccccCcEEEEEecCCCCCeEee-cC--CCCccccceEEeCCCcEEEEcCccCCCCCc
Q 043381 15 RAEVLICGGAKPEAGMLAGKGEFMNALQDCGRIEITNKSATWQRE-MM--PSPRVMGEMLLLPTGDVLIINGAKKGTAGW 91 (286)
Q Consensus 15 ~~~Vlv~GG~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M--~~~R~~~~~v~LpdG~VlvvGG~~~g~ag~ 91 (286)
++++|+.||.+ .+..++|+.. ..|... .+ .+.+.-.+...-|||+.|++|+.+.
T Consensus 27 ~g~~las~~~D----------------~~i~iw~~~~--~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~----- 83 (345)
T 3fm0_A 27 AGTLLASCGGD----------------RRIRIWGTEG--DSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA----- 83 (345)
T ss_dssp TSSCEEEEETT----------------SCEEEEEEET--TEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTS-----
T ss_pred CCCEEEEEcCC----------------CeEEEEEcCC--CcceeeeeeccccCCcEEEEEECCCCCEEEEEECCC-----
Confidence 56677777764 2445677653 455433 22 2222223345679999999998762
Q ss_pred cCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCCCC
Q 043381 92 NFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPH 146 (286)
Q Consensus 92 ~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~~ 146 (286)
+..+||..+. .+..+..+.--...-.....-|||+.|++|+.+.
T Consensus 84 --------~v~iw~~~~~---~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~ 127 (345)
T 3fm0_A 84 --------TTCIWKKNQD---DFECVTTLEGHENEVKSVAWAPSGNLLATCSRDK 127 (345)
T ss_dssp --------CEEEEEECCC----EEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred --------cEEEEEccCC---CeEEEEEccCCCCCceEEEEeCCCCEEEEEECCC
Confidence 3468888776 5543322211111122345578999999998654
No 21
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=88.36 E-value=4.1 Score=39.68 Aligned_cols=131 Identities=16% Similarity=0.158 Sum_probs=68.9
Q ss_pred CCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCCCCCCcccCCCCCCCcccEEEEEeCCCCCCCCCCCCCceeecCCC
Q 043381 109 PINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPHSRYNLTSGSKYPTELRIEKFYPPYFDESFASYRPSIVSKFKG 188 (286)
Q Consensus 109 ~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~~~~~~~~~~~~~p~~~~vE~y~Ppyl~~~~~~~RP~i~~~~~p 188 (286)
+.|++|+....+.-.....+..+.++||+|+++.-.. . ......|....|... .-| . ... +
T Consensus 306 D~G~tW~~~~~l~~~~~~Y~~l~~~~dg~i~~~ye~~-~------------~i~~~~~~~~~l~~~---~~~-~-~~~-~ 366 (601)
T 1w8o_A 306 DDGQTWPVSKVFQPGSMSYSTLTALPDGTYGLLYEPG-T------------GIRYANFNLAWLGGI---CAP-F-TIP-D 366 (601)
T ss_dssp STTSCCCEEEEEEEEECCCEEEEECTTSCEEEEECCS-S------------EEEEEEECHHHHTBC---SCC-E-ECC-C
T ss_pred CCCCCCCCceEeCCCCCCCCeEEEcCCCeEEEEEecC-C------------cceEEEecHHHhccc---cCC-C-cCc-c
Confidence 5577897643221122223445668999999885322 1 235567777777543 122 2 231 5
Q ss_pred ceeecCCEEEEEEEecccc-cccCcEEEEEEcCCccccccCCCcceEEecceeeeecCCc-eEEEEEEcCCCCCcCCCcc
Q 043381 189 KMVKYGQNFVIQFKLDELE-VSLNDLKVTMYAPPFTTHGVSMGQRLLVLATKELIDVGSG-IFQVSVTAPPTAKIAPPSF 266 (286)
Q Consensus 189 ~~~~~g~~~~v~~~~~~~~-~~~~~~~v~L~~~~~~THs~n~~QR~v~L~~~~~~~~g~~-~~~~~v~~P~~~~vappG~ 266 (286)
.++..|++++|+++..... ......+++|..+.-.+= +- .+... ..|.+ +-.++|++|.. +.+|.
T Consensus 367 ~~~~~g~~~~~~~~vtn~~~~~~~~~~~~~~~~~~~~~------~~-~~~~~---~~g~~~t~~~~vt~~~~---~~~g~ 433 (601)
T 1w8o_A 367 VALEPGQQVTVPVAVTNQSGIAVPKPSLQLDASPDWQV------QG-SVEPL---MPGRQAKGQVTITVPAG---TTPGR 433 (601)
T ss_dssp EEECTTCEEEEEEEEECCSSSCBSSCEEEEECCTTSEE------EE-EECCB---CTTCEEEEEEEEECCTT---CCCEE
T ss_pred ceecCCceeEEEEEEECCCceeccCceEEEecCCCcEE------ec-ccccc---CCCCceEEEEEEecCCC---CCCCc
Confidence 6688999888877653321 011224677665443331 11 11111 12432 23457788764 55899
Q ss_pred eEEEE
Q 043381 267 YLLFV 271 (286)
Q Consensus 267 YmLFv 271 (286)
|+|=+
T Consensus 434 y~l~~ 438 (601)
T 1w8o_A 434 YRVGA 438 (601)
T ss_dssp EEEEE
T ss_pred EEeeE
Confidence 98743
No 22
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=87.90 E-value=2.6 Score=35.52 Aligned_cols=103 Identities=13% Similarity=0.166 Sum_probs=59.1
Q ss_pred ccEEEEEcCCCCCCCcccCCCccccccCcEEEEEecCCCCCeEee-cCCC-CccccceEEeC--CCcEEEEcCccCCCCC
Q 043381 15 RAEVLICGGAKPEAGMLAGKGEFMNALQDCGRIEITNKSATWQRE-MMPS-PRVMGEMLLLP--TGDVLIINGAKKGTAG 90 (286)
Q Consensus 15 ~~~Vlv~GG~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~~-~R~~~~~v~Lp--dG~VlvvGG~~~g~ag 90 (286)
+++.|++|+.+ ....++|+......|+.. .+.. ...-.+....| ||+.+++|+.+.
T Consensus 22 ~~~~l~~~~~d----------------g~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg---- 81 (351)
T 3f3f_A 22 YGRHVATCSSD----------------QHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDK---- 81 (351)
T ss_dssp SSSEEEEEETT----------------SEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTS----
T ss_pred CCCEEEEeeCC----------------CeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCC----
Confidence 56677777754 245677877555666654 3322 22222334456 699999998651
Q ss_pred ccCCCCCCCccEEecCCCCC----CCceEEcCCCCCCCccceeeEEcCC--CcEEEeCCCCC
Q 043381 91 WNFATDPNTTPVLYEPNDPI----NERFSELTPTSKPRMCHSTSVVLPD--GKILVAGSNPH 146 (286)
Q Consensus 91 ~~~~~~~~~~~e~YdP~t~~----g~~wt~~a~~~~~R~yHS~A~LLpD--GrVlv~GG~~~ 146 (286)
...+||..+.. +++|..+.........-......|| ++.+++|+...
T Consensus 82 ---------~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg 134 (351)
T 3f3f_A 82 ---------TVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDG 134 (351)
T ss_dssp ---------CEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTC
T ss_pred ---------eEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCC
Confidence 34688887642 2345444333322222334556788 99888887543
No 23
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=87.28 E-value=4.3 Score=35.03 Aligned_cols=101 Identities=13% Similarity=0.175 Sum_probs=58.4
Q ss_pred ccEEEEEcCCCCCCCcccCCCccccccCcEEEEEecCCCCCeEee-cCCC-CccccceEEeCC---CcEEEEcCccCCCC
Q 043381 15 RAEVLICGGAKPEAGMLAGKGEFMNALQDCGRIEITNKSATWQRE-MMPS-PRVMGEMLLLPT---GDVLIINGAKKGTA 89 (286)
Q Consensus 15 ~~~Vlv~GG~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~~-~R~~~~~v~Lpd---G~VlvvGG~~~g~a 89 (286)
+++.+++|+.+ ....++|+......|... .+.. ...-.+...-|| |+++++++.+.
T Consensus 171 ~~~~l~~~~~d----------------g~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg--- 231 (379)
T 3jrp_A 171 ESRKFVTGGAD----------------NLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDR--- 231 (379)
T ss_dssp TTCEEEEEETT----------------SCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTS---
T ss_pred CCCEEEEEeCC----------------CeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCC---
Confidence 45667777654 245678887655666654 4432 222234567889 89999988651
Q ss_pred CccCCCCCCCccEEecCCCCCCC-ceEEcCCCCCCCccceeeEEcCCCcEEEeCCCC
Q 043381 90 GWNFATDPNTTPVLYEPNDPINE-RFSELTPTSKPRMCHSTSVVLPDGKILVAGSNP 145 (286)
Q Consensus 90 g~~~~~~~~~~~e~YdP~t~~g~-~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~ 145 (286)
...+||..+.... ............ .-.....-|||+.+++|+..
T Consensus 232 ----------~i~iwd~~~~~~~~~~~~~~~~~~~~-~v~~~~~s~~g~~l~~~~~d 277 (379)
T 3jrp_A 232 ----------TCIIWTQDNEQGPWKKTLLKEEKFPD-VLWRASWSLSGNVLALSGGD 277 (379)
T ss_dssp ----------CEEEEEESSTTSCCEEEESSSSCCSS-CEEEEEECSSSCCEEEEESS
T ss_pred ----------EEEEEeCCCCCccceeeeeccccCCC-cEEEEEEcCCCCEEEEecCC
Confidence 3468888775221 112222211222 22234567999999988753
No 24
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=86.59 E-value=2.5 Score=36.99 Aligned_cols=83 Identities=11% Similarity=0.021 Sum_probs=51.4
Q ss_pred cEEEEEecCCCCCeEeecCCCCccccceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCC-CC
Q 043381 43 DCGRIEITNKSATWQREMMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTP-TS 121 (286)
Q Consensus 43 s~~~id~~~~~~~W~~~~M~~~R~~~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~-~~ 121 (286)
....+|+. .+-.|+...-. + .+.+..+++|+++|++... .....+||++.. ..|+.-.. ..
T Consensus 147 ~v~~~d~~-G~~~w~~~~~~--~-~~~~~~~~~g~~~v~~~~~-------------~~v~~~d~~tG~-~~w~~~~~~~~ 208 (276)
T 3no2_A 147 EVREIAPN-GQLLNSVKLSG--T-PFSSAFLDNGDCLVACGDA-------------HCFVQLNLESNR-IVRRVNANDIE 208 (276)
T ss_dssp EEEEECTT-SCEEEEEECSS--C-CCEEEECTTSCEEEECBTT-------------SEEEEECTTTCC-EEEEEEGGGSB
T ss_pred EEEEECCC-CCEEEEEECCC--C-ccceeEcCCCCEEEEeCCC-------------CeEEEEeCcCCc-EEEEecCCCCC
Confidence 35556765 45678876211 1 2346789999999987643 134689998641 15664321 11
Q ss_pred CCCc-cceeeEEcCCCcEEEeCC
Q 043381 122 KPRM-CHSTSVVLPDGKILVAGS 143 (286)
Q Consensus 122 ~~R~-yHS~A~LLpDGrVlv~GG 143 (286)
-.|+ +.+.+.+++||++||+..
T Consensus 209 ~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 209 GVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp SCCCSEEEEEEECTTSCEEEEEE
T ss_pred CccccccccceEcCCCCEEEEec
Confidence 1233 456678899999999973
No 25
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=86.06 E-value=3.4 Score=35.83 Aligned_cols=98 Identities=8% Similarity=0.127 Sum_probs=57.6
Q ss_pred ccEEEEEcCCCCCCCcccCCCccccccCcEEEEEecCCCCCeEee-cCC-CCccccceEEeCCCcEEEEcCccCCCCCcc
Q 043381 15 RAEVLICGGAKPEAGMLAGKGEFMNALQDCGRIEITNKSATWQRE-MMP-SPRVMGEMLLLPTGDVLIINGAKKGTAGWN 92 (286)
Q Consensus 15 ~~~Vlv~GG~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~-~~R~~~~~v~LpdG~VlvvGG~~~g~ag~~ 92 (286)
+++.|++|+.+ ....++|+.. ..|+.. .+. ....-.+....|||+.+++++.+.
T Consensus 19 ~~~~l~~~~~d----------------~~v~i~~~~~--~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg------ 74 (372)
T 1k8k_C 19 DRTQIAICPNN----------------HEVHIYEKSG--NKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDR------ 74 (372)
T ss_dssp TSSEEEEECSS----------------SEEEEEEEET--TEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTS------
T ss_pred CCCEEEEEeCC----------------CEEEEEeCCC--CcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCC------
Confidence 56778888754 2455777763 445443 332 222233456778999999988651
Q ss_pred CCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCCCC
Q 043381 93 FATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPH 146 (286)
Q Consensus 93 ~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~~ 146 (286)
...+||..+. ++........-...-......|||+.+++|+...
T Consensus 75 -------~i~vwd~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 118 (372)
T 1k8k_C 75 -------NAYVWTLKGR---TWKPTLVILRINRAARCVRWAPNEKKFAVGSGSR 118 (372)
T ss_dssp -------CEEEEEEETT---EEEEEEECCCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred -------eEEEEECCCC---eeeeeEEeecCCCceeEEEECCCCCEEEEEeCCC
Confidence 3468888777 6554322111111222345568999988887543
No 26
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=85.84 E-value=4.4 Score=36.98 Aligned_cols=60 Identities=12% Similarity=0.152 Sum_probs=38.4
Q ss_pred EEeC-CCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCCCC
Q 043381 71 LLLP-TGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPH 146 (286)
Q Consensus 71 v~Lp-dG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~~ 146 (286)
...| ||+.|++++.+. +.-+||-++. ....+........+......-|||+++++|+...
T Consensus 171 ~f~p~~~~~l~s~s~D~-------------~v~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg 231 (435)
T 4e54_B 171 KFNPLNTNQFYASSMEG-------------TTRLQDFKGN---ILRVFASSDTINIWFCSLDVSASSRMVVTGDNVG 231 (435)
T ss_dssp EECSSCTTEEEEECSSS-------------CEEEEETTSC---EEEEEECCSSCSCCCCCEEEETTTTEEEEECSSS
T ss_pred EEeCCCCCEEEEEeCCC-------------EEEEeeccCC---ceeEEeccCCCCccEEEEEECCCCCEEEEEeCCC
Confidence 3455 789999998761 3468998776 5555443333333333344568999999998654
No 27
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=84.83 E-value=2.9 Score=37.05 Aligned_cols=61 Identities=15% Similarity=0.180 Sum_probs=38.7
Q ss_pred eEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCCCC
Q 043381 70 MLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPH 146 (286)
Q Consensus 70 ~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~~ 146 (286)
....|||+.+++|+.+. +..+||..+. +|.....+.--...-.....-|||+.|++|+.+.
T Consensus 156 ~~~~p~~~~l~s~s~d~-------------~i~~w~~~~~---~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~ 216 (345)
T 3fm0_A 156 VVWHPSQELLASASYDD-------------TVKLYREEED---DWVCCATLEGHESTVWSLAFDPSGQRLASCSDDR 216 (345)
T ss_dssp EEECSSSSCEEEEETTS-------------CEEEEEEETT---EEEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEECCCCCEEEEEeCCC-------------cEEEEEecCC---CEEEEEEecCCCCceEEEEECCCCCEEEEEeCCC
Confidence 45679999999988652 3468988777 7754322211111112344568999999998543
No 28
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=84.12 E-value=2.9 Score=36.14 Aligned_cols=98 Identities=12% Similarity=0.153 Sum_probs=57.4
Q ss_pred ccEEEEEcCCCCCCCcccCCCccccccCcEEEEEecCCCCCeEee-cCCCCccc-cceEEeCC--CcEEEEcCccCCCCC
Q 043381 15 RAEVLICGGAKPEAGMLAGKGEFMNALQDCGRIEITNKSATWQRE-MMPSPRVM-GEMLLLPT--GDVLIINGAKKGTAG 90 (286)
Q Consensus 15 ~~~Vlv~GG~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~~~R~~-~~~v~Lpd--G~VlvvGG~~~g~ag 90 (286)
+++.|++|+.+ ....++|+.. ..+... .+...... .+....++ |+.+++++.+ |
T Consensus 22 ~~~~l~~~~~d----------------g~i~iw~~~~--~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d-g--- 79 (379)
T 3jrp_A 22 YGKRLATCSSD----------------KTIKIFEVEG--ETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-G--- 79 (379)
T ss_dssp SSSEEEEEETT----------------SCEEEEEEET--TEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-S---
T ss_pred CCCEEEEEECC----------------CcEEEEecCC--CcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccC-C---
Confidence 56677777754 2345677653 445543 33222111 22233466 9999998865 1
Q ss_pred ccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCC--CcEEEeCCCCC
Q 043381 91 WNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPD--GKILVAGSNPH 146 (286)
Q Consensus 91 ~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpD--GrVlv~GG~~~ 146 (286)
...+||..+. +|..+.........-....+.|+ |+.+++|+...
T Consensus 80 ---------~v~iwd~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~ 125 (379)
T 3jrp_A 80 ---------KVLIWKEENG---RWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDG 125 (379)
T ss_dssp ---------CEEEEEEETT---EEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred ---------EEEEEEcCCC---ceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCC
Confidence 3568998888 77654443322233334556788 88888887543
No 29
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=84.06 E-value=2.3 Score=36.77 Aligned_cols=56 Identities=14% Similarity=0.256 Sum_probs=32.6
Q ss_pred CCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCC--CcEEEeCCCCC
Q 043381 75 TGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPD--GKILVAGSNPH 146 (286)
Q Consensus 75 dG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpD--GrVlv~GG~~~ 146 (286)
+|++|++|+.+. +.-+||..+. +|..+.........-.....-|| |+.+++|+...
T Consensus 66 ~g~~l~s~s~D~-------------~v~iWd~~~~---~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~ 123 (297)
T 2pm7_B 66 FGTILASCSYDG-------------KVMIWKEENG---RWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDG 123 (297)
T ss_dssp GCSEEEEEETTT-------------EEEEEEBSSS---CBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred cCCEEEEEcCCC-------------EEEEEEcCCC---ceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCC
Confidence 489999998762 4568998876 55433221111111122344566 88888887543
No 30
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=84.00 E-value=5 Score=35.83 Aligned_cols=80 Identities=18% Similarity=0.370 Sum_probs=48.5
Q ss_pred EEEecCCCCCeEeecCCCCccccceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCc
Q 043381 46 RIEITNKSATWQREMMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRM 125 (286)
Q Consensus 46 ~id~~~~~~~W~~~~M~~~R~~~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~ 125 (286)
++.-.|...+|+....+...........++|+++++|-. |. +|--...-|++|+.+.. ...+.
T Consensus 144 v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~--G~--------------~~~S~d~gG~tW~~~~~-~~~~~ 206 (327)
T 2xbg_A 144 IYRTKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSR--GS--------------FYSTWEPGQTAWEPHNR-TTSRR 206 (327)
T ss_dssp EEEESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETT--SS--------------EEEEECTTCSSCEEEEC-CSSSC
T ss_pred EEEEcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECC--Cc--------------EEEEeCCCCCceeECCC-CCCCc
Confidence 444455567899874344445566677899999877632 11 22111112458998743 34555
Q ss_pred cceeeEEcCCCcEEEeCC
Q 043381 126 CHSTSVVLPDGKILVAGS 143 (286)
Q Consensus 126 yHS~A~LLpDGrVlv~GG 143 (286)
.++.+ ..+||++++++.
T Consensus 207 ~~~~~-~~~~g~~~~~~~ 223 (327)
T 2xbg_A 207 LHNMG-FTPDGRLWMIVN 223 (327)
T ss_dssp EEEEE-ECTTSCEEEEET
T ss_pred cceeE-ECCCCCEEEEeC
Confidence 66655 478999998875
No 31
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=83.07 E-value=4.1 Score=34.49 Aligned_cols=66 Identities=18% Similarity=0.252 Sum_probs=39.0
Q ss_pred ccccceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCC
Q 043381 65 RVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSN 144 (286)
Q Consensus 65 R~~~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~ 144 (286)
..-.+....|||+.+++++.+. ...+||..+. +....................|||+.+++|+.
T Consensus 98 ~~v~~~~~~~~~~~l~~~~~d~-------------~i~~~d~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 161 (337)
T 1gxr_A 98 NYIRSCKLLPDGCTLIVGGEAS-------------TLSIWDLAAP---TPRIKAELTSSAPACYALAISPDSKVCFSCCS 161 (337)
T ss_dssp SBEEEEEECTTSSEEEEEESSS-------------EEEEEECCCC-----EEEEEEECSSSCEEEEEECTTSSEEEEEET
T ss_pred CcEEEEEEcCCCCEEEEEcCCC-------------cEEEEECCCC---CcceeeecccCCCceEEEEECCCCCEEEEEeC
Confidence 3344557789999999987541 3568998887 43322211111111223456789999988875
Q ss_pred CC
Q 043381 145 PH 146 (286)
Q Consensus 145 ~~ 146 (286)
..
T Consensus 162 dg 163 (337)
T 1gxr_A 162 DG 163 (337)
T ss_dssp TS
T ss_pred CC
Confidence 43
No 32
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=82.86 E-value=12 Score=32.80 Aligned_cols=57 Identities=7% Similarity=0.081 Sum_probs=35.1
Q ss_pred ceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCce-EEcCCCCCCCccceeeEEcCCCcEEEeCCC
Q 043381 69 EMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERF-SELTPTSKPRMCHSTSVVLPDGKILVAGSN 144 (286)
Q Consensus 69 ~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~w-t~~a~~~~~R~yHS~A~LLpDGrVlv~GG~ 144 (286)
+...-|||+.+++|+.+. +..+||..+. +- ..+... +..-......|||+.|++||.
T Consensus 253 ~~~~sp~~~~l~s~s~D~-------------~v~iwd~~~~---~~~~~~~~h---~~~v~~v~~s~~g~~l~s~~~ 310 (321)
T 3ow8_A 253 NVAFCPDDTHFVSSSSDK-------------SVKVWDVGTR---TCVHTFFDH---QDQVWGVKYNGNGSKIVSVGD 310 (321)
T ss_dssp EEEECTTSSEEEEEETTS-------------CEEEEETTTT---EEEEEECCC---SSCEEEEEECTTSSEEEEEET
T ss_pred EEEECCCCCEEEEEeCCC-------------cEEEEeCCCC---EEEEEEcCC---CCcEEEEEECCCCCEEEEEeC
Confidence 345679999999988652 3568888765 32 222111 111123445789999999885
No 33
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=81.97 E-value=8.9 Score=34.03 Aligned_cols=59 Identities=24% Similarity=0.259 Sum_probs=36.2
Q ss_pred eEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceE-EcCCCCCCCccceeeEEcCCCcEEEeCCCC
Q 043381 70 MLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFS-ELTPTSKPRMCHSTSVVLPDGKILVAGSNP 145 (286)
Q Consensus 70 ~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt-~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~ 145 (286)
....|||+.+++|+.+. +..+||..+. +-. ....... ....+....-|||+.+++|+..
T Consensus 246 v~~~p~~~~l~s~s~D~-------------~v~lwd~~~~---~~~~~~~~~~~-~~~~~~~~~s~~g~~l~~g~~d 305 (354)
T 2pbi_B 246 VRYYPSGDAFASGSDDA-------------TCRLYDLRAD---REVAIYSKESI-IFGASSVDFSLSGRLLFAGYND 305 (354)
T ss_dssp EEECTTSSEEEEEETTS-------------CEEEEETTTT---EEEEEECCTTC-CSCEEEEEECTTSSEEEEEETT
T ss_pred EEEeCCCCEEEEEeCCC-------------eEEEEECCCC---cEEEEEcCCCc-ccceeEEEEeCCCCEEEEEECC
Confidence 35679999999998652 3568887765 322 2211111 1122345567899999999853
No 34
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=81.55 E-value=6.1 Score=34.63 Aligned_cols=88 Identities=10% Similarity=0.062 Sum_probs=46.6
Q ss_pred cEEEEEecCCCCCeEee-cCCC-CccccceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCC
Q 043381 43 DCGRIEITNKSATWQRE-MMPS-PRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPT 120 (286)
Q Consensus 43 s~~~id~~~~~~~W~~~-~M~~-~R~~~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~ 120 (286)
++.++|+......++.. .+.. ...-.+...-|||+.+++|+.+. +..+||..+. .|..+..+
T Consensus 130 ~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~-------------~i~iW~~~~~---~~~~~~~~ 193 (330)
T 2hes_X 130 SVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDD-------------TVRIWKDYDD---DWECVAVL 193 (330)
T ss_dssp CEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTS-------------CEEEEEEETT---EEEEEEEE
T ss_pred EEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCC-------------eEEEEECCCC---CeeEEEEc
Confidence 45567774333445433 2221 11122334568999999998762 3468887766 56543322
Q ss_pred CCCCccceeeEEcCC--CcEEEeCCCCC
Q 043381 121 SKPRMCHSTSVVLPD--GKILVAGSNPH 146 (286)
Q Consensus 121 ~~~R~yHS~A~LLpD--GrVlv~GG~~~ 146 (286)
.--...-.....-|| +..++.|+.+.
T Consensus 194 ~~h~~~v~~~~~~~~~~~~~l~s~s~D~ 221 (330)
T 2hes_X 194 NGHEGTVWSSDFDKTEGVFRLCSGSDDS 221 (330)
T ss_dssp CCCSSCEEEEEECCSSSSCEEEEEETTS
T ss_pred cCCCCcEEEEEecCCCCeeEEEEEeCCC
Confidence 111111112334567 67788887543
No 35
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=80.96 E-value=10 Score=33.15 Aligned_cols=58 Identities=14% Similarity=0.238 Sum_probs=35.4
Q ss_pred eEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceE-EcCCCCCCCccceeeEEcCCCcEEEeCCC
Q 043381 70 MLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFS-ELTPTSKPRMCHSTSVVLPDGKILVAGSN 144 (286)
Q Consensus 70 ~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt-~~a~~~~~R~yHS~A~LLpDGrVlv~GG~ 144 (286)
....|||+.+++|+.+. +..+||..+. +-. ......... .-.....-|||+.+++|+.
T Consensus 232 v~~~p~~~~l~s~s~d~-------------~v~iwd~~~~---~~~~~~~~~~~~~-~v~~~~~s~~g~~l~~g~~ 290 (340)
T 1got_B 232 ICFFPNGNAFATGSDDA-------------TCRLFDLRAD---QELMTYSHDNIIC-GITSVSFSKSGRLLLAGYD 290 (340)
T ss_dssp EEECTTSSEEEEEETTS-------------CEEEEETTTT---EEEEEECCTTCCS-CEEEEEECTTSSEEEEEET
T ss_pred EEEcCCCCEEEEEcCCC-------------cEEEEECCCC---cEEEEEccCCccc-ceEEEEECCCCCEEEEECC
Confidence 45679999999998652 3468888765 321 221111111 1123445799999999985
No 36
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=80.77 E-value=10 Score=33.13 Aligned_cols=58 Identities=16% Similarity=0.238 Sum_probs=36.7
Q ss_pred ceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceE-EcCCCCCCCccceeeEEcCCCcEEEeCCCC
Q 043381 69 EMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFS-ELTPTSKPRMCHSTSVVLPDGKILVAGSNP 145 (286)
Q Consensus 69 ~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt-~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~ 145 (286)
+...-|||+.+++|+.+. ...+||..+. +-. .+.... .. -.....-|||+.|++|+..
T Consensus 169 ~~~~spdg~~lasg~~dg-------------~i~iwd~~~~---~~~~~~~~h~-~~--v~~l~~spd~~~l~s~s~d 227 (321)
T 3ow8_A 169 SIAYSPDGKYLASGAIDG-------------IINIFDIATG---KLLHTLEGHA-MP--IRSLTFSPDSQLLVTASDD 227 (321)
T ss_dssp EEEECTTSSEEEEEETTS-------------CEEEEETTTT---EEEEEECCCS-SC--CCEEEECTTSCEEEEECTT
T ss_pred EEEECCCCCEEEEEcCCC-------------eEEEEECCCC---cEEEEEcccC-Cc--eeEEEEcCCCCEEEEEcCC
Confidence 446779999999988651 3468998775 332 222111 11 1124457899999999853
No 37
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=80.70 E-value=2 Score=37.83 Aligned_cols=98 Identities=9% Similarity=0.179 Sum_probs=51.8
Q ss_pred ccEEEEEcCCCCCCCcccCCCccccccCcEEEEEecCCCCCeEee-cCCC-CccccceEEeCCCcEEEEcCccCCCCCcc
Q 043381 15 RAEVLICGGAKPEAGMLAGKGEFMNALQDCGRIEITNKSATWQRE-MMPS-PRVMGEMLLLPTGDVLIINGAKKGTAGWN 92 (286)
Q Consensus 15 ~~~Vlv~GG~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~~-~R~~~~~v~LpdG~VlvvGG~~~g~ag~~ 92 (286)
+++.|++|+.+ ....++|+.. ..|+.. .+.. ...-.+....|||+.+++++.+.
T Consensus 22 ~g~~l~~~~~d----------------~~i~iw~~~~--~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~------ 77 (377)
T 3dwl_C 22 QRTEFVTTTAT----------------NQVELYEQDG--NGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDR------ 77 (377)
T ss_dssp SSSEEECCCSS----------------SCBCEEEEET--TEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTS------
T ss_pred CCCEEEEecCC----------------CEEEEEEccC--CceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCC------
Confidence 57788888764 1334677763 556654 4432 22223345779999999988651
Q ss_pred CCCCCCCccEEecCCCCCCCc-eEEcCCCCCCCccceeeEEcCCCcEEEeCCCCC
Q 043381 93 FATDPNTTPVLYEPNDPINER-FSELTPTSKPRMCHSTSVVLPDGKILVAGSNPH 146 (286)
Q Consensus 93 ~~~~~~~~~e~YdP~t~~g~~-wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~~ 146 (286)
+..+||..+. + |........-...-......|||+.+++|+...
T Consensus 78 -------~v~vwd~~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 122 (377)
T 3dwl_C 78 -------NAYVYEKRPD---GTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGAR 122 (377)
T ss_dssp -------SEEEC---------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSS
T ss_pred -------eEEEEEcCCC---CceeeeeEecccCCceEEEEECCCCCEEEEEecCC
Confidence 3468888776 3 332221111111122344568998888887543
No 38
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=80.45 E-value=16 Score=32.62 Aligned_cols=60 Identities=13% Similarity=0.149 Sum_probs=36.1
Q ss_pred eEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceE-EcCCCCC----CCccceeeEEcCCCcEEEeCCC
Q 043381 70 MLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFS-ELTPTSK----PRMCHSTSVVLPDGKILVAGSN 144 (286)
Q Consensus 70 ~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt-~~a~~~~----~R~yHS~A~LLpDGrVlv~GG~ 144 (286)
....|||+.+++|+.+. +..+||..+. +-. ....... ....-.....-|||+.+++|+.
T Consensus 255 v~~~p~~~~l~s~s~D~-------------~i~lwd~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~ 318 (380)
T 3iz6_a 255 VKFFPDGQRFGTGSDDG-------------TCRLFDMRTG---HQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYS 318 (380)
T ss_dssp EEECTTSSEEEEECSSS-------------CEEEEETTTT---EEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECT
T ss_pred EEEecCCCeEEEEcCCC-------------eEEEEECCCC---cEEEEecccccccccccCceEEEEECCCCCEEEEEEC
Confidence 45789999999999762 3568888765 221 1111100 0001123455789999999985
Q ss_pred C
Q 043381 145 P 145 (286)
Q Consensus 145 ~ 145 (286)
.
T Consensus 319 d 319 (380)
T 3iz6_a 319 N 319 (380)
T ss_dssp T
T ss_pred C
Confidence 3
No 39
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=80.07 E-value=6.1 Score=39.43 Aligned_cols=91 Identities=11% Similarity=0.070 Sum_probs=51.6
Q ss_pred cEEEEEecCCCCCeEee-cCC-CCccccceEEeCC---CcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEc
Q 043381 43 DCGRIEITNKSATWQRE-MMP-SPRVMGEMLLLPT---GDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSEL 117 (286)
Q Consensus 43 s~~~id~~~~~~~W~~~-~M~-~~R~~~~~v~Lpd---G~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~ 117 (286)
...++|+......|... .+. ....-.+...-|| |+++++||.+. ...+||..+..+..-..+
T Consensus 181 ~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg-------------~I~iwd~~~~~~~~~~~~ 247 (753)
T 3jro_A 181 LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDR-------------TCIIWTQDNEQGPWKKTL 247 (753)
T ss_dssp CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSS-------------CEEEEEESSSSSCCBCCB
T ss_pred eEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCC-------------EEEEecCCCCCCcceeEE
Confidence 45678887655666654 332 2222334567889 99999998651 356899877522111122
Q ss_pred CCCCCCCccceeeEEcCCCcEEEeCCCCC
Q 043381 118 TPTSKPRMCHSTSVVLPDGKILVAGSNPH 146 (286)
Q Consensus 118 a~~~~~R~yHS~A~LLpDGrVlv~GG~~~ 146 (286)
.........-.....-|||+.+++||...
T Consensus 248 ~~~~~~~~~v~~l~~spdg~~l~s~s~Dg 276 (753)
T 3jro_A 248 LKEEKFPDVLWRASWSLSGNVLALSGGDN 276 (753)
T ss_dssp SSSSCCSSCCCCEEECTTTCCEEEECSSS
T ss_pred eccCCCCCceEEEEEcCCCCEEEEEcCCC
Confidence 11111111112345578999999988643
No 40
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=78.08 E-value=27 Score=29.21 Aligned_cols=59 Identities=8% Similarity=0.179 Sum_probs=34.2
Q ss_pred ceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCC
Q 043381 69 EMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSN 144 (286)
Q Consensus 69 ~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~ 144 (286)
..++-+||++||++.... ...+||+... ....+....... +-...++-+||++||+...
T Consensus 168 ~i~~~~~g~l~v~~~~~~-------------~i~~~~~~g~---~~~~~~~~g~~~-~p~~i~~d~~G~l~v~~~~ 226 (286)
T 1q7f_A 168 GVVVNDKQEIFISDNRAH-------------CVKVFNYEGQ---YLRQIGGEGITN-YPIGVGINSNGEILIADNH 226 (286)
T ss_dssp EEEECSSSEEEEEEGGGT-------------EEEEEETTCC---EEEEESCTTTSC-SEEEEEECTTCCEEEEECS
T ss_pred EEEECCCCCEEEEECCCC-------------EEEEEcCCCC---EEEEEccCCccC-CCcEEEECCCCCEEEEeCC
Confidence 346678999999765331 3468898654 444443211001 1122445689999999753
No 41
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=78.06 E-value=12 Score=32.29 Aligned_cols=43 Identities=9% Similarity=0.072 Sum_probs=24.9
Q ss_pred cEEEEEecCCCCCeEeec--CCCCccccceEEeCCCcEEEEcCcc
Q 043381 43 DCGRIEITNKSATWQREM--MPSPRVMGEMLLLPTGDVLIINGAK 85 (286)
Q Consensus 43 s~~~id~~~~~~~W~~~~--M~~~R~~~~~v~LpdG~VlvvGG~~ 85 (286)
...++|+......|.... ......-.+....|||+.+++|+.+
T Consensus 119 ~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 163 (372)
T 1k8k_C 119 VISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD 163 (372)
T ss_dssp SEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETT
T ss_pred EEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCC
Confidence 455677765333333222 2223333455678999999998865
No 42
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=77.13 E-value=3.8 Score=35.71 Aligned_cols=56 Identities=14% Similarity=0.263 Sum_probs=32.0
Q ss_pred CCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCC--CcEEEeCCCCC
Q 043381 75 TGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPD--GKILVAGSNPH 146 (286)
Q Consensus 75 dG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpD--GrVlv~GG~~~ 146 (286)
+|++|++|+.+. +.-+||..+. +|.......--...-.....-|| |+++++|+...
T Consensus 70 ~~~~l~s~s~D~-------------~v~iWd~~~~---~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~ 127 (316)
T 3bg1_A 70 YGNILASCSYDR-------------KVIIWREENG---TWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDG 127 (316)
T ss_dssp GSSCEEEEETTS-------------CEEEECCSSS---CCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSS
T ss_pred CCCEEEEEECCC-------------EEEEEECCCC---cceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCC
Confidence 489999998662 3568998876 55432211100111112334566 88888888644
No 43
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=76.52 E-value=10 Score=33.33 Aligned_cols=86 Identities=9% Similarity=-0.001 Sum_probs=48.8
Q ss_pred cEEEEEecCCCCCeEee-cC-CCCccccceEEeC-CCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCC
Q 043381 43 DCGRIEITNKSATWQRE-MM-PSPRVMGEMLLLP-TGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTP 119 (286)
Q Consensus 43 s~~~id~~~~~~~W~~~-~M-~~~R~~~~~v~Lp-dG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~ 119 (286)
+..++|+.. ...... .. .....-.+....| |++.+++++.+. ...+||.... ....+..
T Consensus 97 ~i~iwd~~~--~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~-------------~i~iwd~~~~---~~~~~~~ 158 (383)
T 3ei3_B 97 DIILWDYDV--QNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRG-------------ATTLRDFSGS---VIQVFAK 158 (383)
T ss_dssp CEEEEETTS--TTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTT-------------EEEEEETTSC---EEEEEEC
T ss_pred eEEEEeCCC--cccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCC-------------EEEEEECCCC---ceEEEec
Confidence 455677753 333333 22 2222223445678 789999887651 3468888865 5555433
Q ss_pred CCCCCccceeeEEcCCCcEEEeCCCCC
Q 043381 120 TSKPRMCHSTSVVLPDGKILVAGSNPH 146 (286)
Q Consensus 120 ~~~~R~yHS~A~LLpDGrVlv~GG~~~ 146 (286)
.......-....+-|||+.+++|+...
T Consensus 159 ~~~~~~~v~~~~~~~~~~~l~~~~~d~ 185 (383)
T 3ei3_B 159 TDSWDYWYCCVDVSVSRQMLATGDSTG 185 (383)
T ss_dssp CCCSSCCEEEEEEETTTTEEEEEETTS
T ss_pred cCCCCCCeEEEEECCCCCEEEEECCCC
Confidence 222112223345568999999988643
No 44
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=74.53 E-value=15 Score=30.98 Aligned_cols=58 Identities=12% Similarity=0.150 Sum_probs=36.1
Q ss_pred ceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEE-cCCCCCCCccceeeEEcCCCcEEEeCCCC
Q 043381 69 EMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSE-LTPTSKPRMCHSTSVVLPDGKILVAGSNP 145 (286)
Q Consensus 69 ~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~-~a~~~~~R~yHS~A~LLpDGrVlv~GG~~ 145 (286)
+....|||+.+++++.+. ...+||..+. +... +.. ... .-....+.|||+.+++|+..
T Consensus 146 ~~~~~~~~~~l~~~~~dg-------------~v~~~d~~~~---~~~~~~~~-~~~--~i~~~~~~~~~~~l~~~~~d 204 (337)
T 1gxr_A 146 ALAISPDSKVCFSCCSDG-------------NIAVWDLHNQ---TLVRQFQG-HTD--GASCIDISNDGTKLWTGGLD 204 (337)
T ss_dssp EEEECTTSSEEEEEETTS-------------CEEEEETTTT---EEEEEECC-CSS--CEEEEEECTTSSEEEEEETT
T ss_pred EEEECCCCCEEEEEeCCC-------------cEEEEeCCCC---ceeeeeec-ccC--ceEEEEECCCCCEEEEEecC
Confidence 346788999999988651 3468988775 4322 221 111 12234567899999988753
No 45
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=74.11 E-value=8.1 Score=33.29 Aligned_cols=54 Identities=20% Similarity=0.238 Sum_probs=33.4
Q ss_pred eCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCce-EEcCCCCCCCccceeeEEcCCCcEEEeCCCC
Q 043381 73 LPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERF-SELTPTSKPRMCHSTSVVLPDGKILVAGSNP 145 (286)
Q Consensus 73 LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~w-t~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~ 145 (286)
.+|++.+++|+.+. +..+||..+. +- ..+... ...-.....-||+++++.|+.+
T Consensus 195 ~~~~~~l~s~s~D~-------------~i~iWd~~~~---~~~~~~~~h---~~~v~~~~~~p~~~~l~s~s~D 249 (304)
T 2ynn_A 195 LPDKPYMITASDDL-------------TIKIWDYQTK---SCVATLEGH---MSNVSFAVFHPTLPIIISGSED 249 (304)
T ss_dssp STTCCEEEEEETTS-------------EEEEEETTTT---EEEEEEECC---SSCEEEEEECSSSSEEEEEETT
T ss_pred cCCCCEEEEEcCCC-------------eEEEEeCCCC---ccceeeCCC---CCCEEEEEECCCCCEEEEEcCC
Confidence 35889999988651 4568998765 22 222111 1112335567999999999853
No 46
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=73.39 E-value=7 Score=39.01 Aligned_cols=98 Identities=12% Similarity=0.153 Sum_probs=58.3
Q ss_pred ccEEEEEcCCCCCCCcccCCCccccccCcEEEEEecCCCCCeEee-cCCCCccc-cceEEeCC--CcEEEEcCccCCCCC
Q 043381 15 RAEVLICGGAKPEAGMLAGKGEFMNALQDCGRIEITNKSATWQRE-MMPSPRVM-GEMLLLPT--GDVLIINGAKKGTAG 90 (286)
Q Consensus 15 ~~~Vlv~GG~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~~~R~~-~~~v~Lpd--G~VlvvGG~~~g~ag 90 (286)
+++.|++||.+ .+..++|+.. .++... .+...+.. .+....++ |+.+++|+.+ |
T Consensus 20 dg~~latg~~d----------------g~I~vwd~~~--~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~D-g--- 77 (753)
T 3jro_A 20 YGKRLATCSSD----------------KTIKIFEVEG--ETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-G--- 77 (753)
T ss_dssp SSCCEEEEETT----------------TEEEEEEEET--TEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETT-S---
T ss_pred CCCeEEEEECC----------------CcEEEEecCC--CCCccceeccCCcCceEEEEecCCCCCCEEEEEeCC-C---
Confidence 56667777754 2455677653 455544 33322221 22234477 9999999875 1
Q ss_pred ccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCC--CcEEEeCCCCC
Q 043381 91 WNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPD--GKILVAGSNPH 146 (286)
Q Consensus 91 ~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpD--GrVlv~GG~~~ 146 (286)
...+||..+. +|............-......|| |+.+++|+...
T Consensus 78 ---------~I~vwd~~~~---~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg 123 (753)
T 3jro_A 78 ---------KVLIWKEENG---RWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDG 123 (753)
T ss_dssp ---------CEEEEEEETT---EEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred ---------eEEEEECCCC---cccccccccCCCCCeEEEEECCCCCCCEEEEEeCCC
Confidence 3568998887 77654443333333334556788 99999988543
No 47
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=73.02 E-value=10 Score=33.80 Aligned_cols=59 Identities=22% Similarity=0.288 Sum_probs=37.0
Q ss_pred ccceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceE-Ec-CCCCCCCccceeeEEcCCCcEEEeCC
Q 043381 67 MGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFS-EL-TPTSKPRMCHSTSVVLPDGKILVAGS 143 (286)
Q Consensus 67 ~~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt-~~-a~~~~~R~yHS~A~LLpDGrVlv~GG 143 (286)
-.+....|||+.+++++.+. ...+||+.+. +-. .+ ....-.+. ......|||+++++|.
T Consensus 179 v~~~~~~~~~~~l~~~~~d~-------------~i~iwd~~~~---~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~g~ 239 (402)
T 2aq5_A 179 IYSVDWSRDGALICTSCRDK-------------RVRVIEPRKG---TVVAEKDRPHEGTRP--VHAVFVSEGKILTTGF 239 (402)
T ss_dssp EEEEEECTTSSCEEEEETTS-------------EEEEEETTTT---EEEEEEECSSCSSSC--CEEEECSTTEEEEEEE
T ss_pred eEEEEECCCCCEEEEEecCC-------------cEEEEeCCCC---ceeeeeccCCCCCcc--eEEEEcCCCcEEEEec
Confidence 34456778999999988651 3569999876 332 22 11111111 2355679999999983
No 48
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=72.88 E-value=34 Score=33.96 Aligned_cols=57 Identities=12% Similarity=0.107 Sum_probs=35.2
Q ss_pred eEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCC---CCCCCccceeeEEcCCCcEEEeCCC
Q 043381 70 MLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTP---TSKPRMCHSTSVVLPDGKILVAGSN 144 (286)
Q Consensus 70 ~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~---~~~~R~yHS~A~LLpDGrVlv~GG~ 144 (286)
.+.-.+|++|+... .| -..|||.+. +++.... +.........++..+||+++++|.+
T Consensus 588 i~~d~~g~lW~~t~--~G-------------l~~~~~~~~---~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~g~~~ 647 (781)
T 3v9f_A 588 ISEDKNGNIWASTN--TG-------------ISCYITSKK---CFYTYDHSNNIPQGSFISGCVTKDHNGLIYFGSIN 647 (781)
T ss_dssp EEECSSSCEEEECS--SC-------------EEEEETTTT---EEEEECGGGTCCSSCEEEEEEEECTTSCEEEEETT
T ss_pred EEECCCCCEEEEcC--Cc-------------eEEEECCCC---ceEEecccCCccccccccCceEECCCCEEEEECCC
Confidence 34556789888642 22 247899888 7765432 2222222234666789999998864
No 49
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=72.60 E-value=25 Score=29.93 Aligned_cols=86 Identities=12% Similarity=0.161 Sum_probs=46.2
Q ss_pred cEEEEEecCCCCCeEee-cCCC--CccccceEEeCCC---cEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEE
Q 043381 43 DCGRIEITNKSATWQRE-MMPS--PRVMGEMLLLPTG---DVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSE 116 (286)
Q Consensus 43 s~~~id~~~~~~~W~~~-~M~~--~R~~~~~v~LpdG---~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~ 116 (286)
+..++|+......|... .+.. ..+ .+...-||| +.++.++.+. +..+||.....+ .|..
T Consensus 181 ~v~lwd~~~~~~~~~~~~~l~~H~~~V-~~v~~sp~~~~~~~las~s~D~-------------~v~iWd~~~~~~-~~~~ 245 (297)
T 2pm7_B 181 LVKIWKYNSDAQTYVLESTLEGHSDWV-RDVAWSPTVLLRSYMASVSQDR-------------TCIIWTQDNEQG-PWKK 245 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEECCCSSCE-EEEEECCCCSSSEEEEEEETTS-------------CEEEEEESSTTS-CCEE
T ss_pred cEEEEEEcCCCceEEEEEEecCCCCce-EEEEECCCCCCceEEEEEECCC-------------cEEEEEeCCCCC-ccce
Confidence 45567776544456544 3432 222 223445774 8888888652 356888776421 3432
Q ss_pred --cCCCCCCCccceeeEEcCCCcEEEeCCC
Q 043381 117 --LTPTSKPRMCHSTSVVLPDGKILVAGSN 144 (286)
Q Consensus 117 --~a~~~~~R~yHS~A~LLpDGrVlv~GG~ 144 (286)
+........-. ....-|||+.|++||.
T Consensus 246 ~~~~~~~~~~~v~-~~~~s~~g~~las~~~ 274 (297)
T 2pm7_B 246 TLLKEEKFPDVLW-RASWSLSGNVLALSGG 274 (297)
T ss_dssp EESSSSCCSSCEE-EEEECSSSCCEEEEET
T ss_pred eeeecccCCCcEE-EEEECCCCCEEEEEcC
Confidence 21111111112 2345689999998885
No 50
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=72.41 E-value=19 Score=30.43 Aligned_cols=84 Identities=11% Similarity=0.129 Sum_probs=45.1
Q ss_pred cEEEEEecCCCCCeEee-cCCCCccccceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCC--CCCCCceEEcCC
Q 043381 43 DCGRIEITNKSATWQRE-MMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPN--DPINERFSELTP 119 (286)
Q Consensus 43 s~~~id~~~~~~~W~~~-~M~~~R~~~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~--t~~g~~wt~~a~ 119 (286)
...++|+.. +..++.. .......-.....-|||+.+++++... ....+||.. +. +++.+..
T Consensus 16 ~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~------------~~v~~~~~~~~~~---~~~~~~~ 79 (343)
T 1ri6_A 16 QIHVWNLNH-EGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPE------------FRVLAYRIAPDDG---ALTFAAE 79 (343)
T ss_dssp EEEEEEECT-TSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTT------------TEEEEEEECTTTC---CEEEEEE
T ss_pred eEEEEEECC-CCcEEEeeeEecCCCCceEEECCCCCEEEEeecCC------------CeEEEEEecCCCC---ceeeccc
Confidence 456777753 3455433 333333444567789999666655431 134677766 55 6654433
Q ss_pred CCCCCccceeeEEcCCCcEE-EeCC
Q 043381 120 TSKPRMCHSTSVVLPDGKIL-VAGS 143 (286)
Q Consensus 120 ~~~~R~yHS~A~LLpDGrVl-v~GG 143 (286)
......-+ ...+-|||+.+ +++.
T Consensus 80 ~~~~~~~~-~~~~s~dg~~l~~~~~ 103 (343)
T 1ri6_A 80 SALPGSLT-HISTDHQGQFVFVGSY 103 (343)
T ss_dssp EECSSCCS-EEEECTTSSEEEEEET
T ss_pred cccCCCCc-EEEEcCCCCEEEEEec
Confidence 32222223 34457899854 5543
No 51
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=72.38 E-value=23 Score=30.83 Aligned_cols=85 Identities=12% Similarity=0.077 Sum_probs=46.1
Q ss_pred cEEEEEecCCCCCeEeecCCCCccccceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCC
Q 043381 43 DCGRIEITNKSATWQREMMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSK 122 (286)
Q Consensus 43 s~~~id~~~~~~~W~~~~M~~~R~~~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~ 122 (286)
+..++|+..... .............+...-|||+++++|+.+. ...+||..+..-.. ..+.....
T Consensus 150 ~i~~wd~~~~~~-~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg-------------~i~iwd~~~~~~~~-~~~~~~h~ 214 (343)
T 3lrv_A 150 TIGFQSYEDDSQ-YIVHSAKSDVEYSSGVLHKDSLLLALYSPDG-------------ILDVYNLSSPDQAS-SRFPVDEE 214 (343)
T ss_dssp CEEEEESSSSCE-EEEECCCSSCCCCEEEECTTSCEEEEECTTS-------------CEEEEESSCTTSCC-EECCCCTT
T ss_pred cEEEEECCCCcE-EEEEecCCCCceEEEEECCCCCEEEEEcCCC-------------EEEEEECCCCCCCc-cEEeccCC
Confidence 455777764222 1111222232344556789999999998651 35789988761110 12221011
Q ss_pred CCccceeeEEcCCCcEEEeCCC
Q 043381 123 PRMCHSTSVVLPDGKILVAGSN 144 (286)
Q Consensus 123 ~R~yHS~A~LLpDGrVlv~GG~ 144 (286)
. .-.....-|||+.|++|++
T Consensus 215 ~--~v~~l~fs~~g~~l~s~~~ 234 (343)
T 3lrv_A 215 A--KIKEVKFADNGYWMVVECD 234 (343)
T ss_dssp S--CEEEEEECTTSSEEEEEES
T ss_pred C--CEEEEEEeCCCCEEEEEeC
Confidence 1 1122345689999999983
No 52
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=71.32 E-value=35 Score=28.84 Aligned_cols=61 Identities=18% Similarity=0.346 Sum_probs=35.5
Q ss_pred eEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCce-EEcCCCCCCCccceeeEEcCCCcEEEeCCCCC
Q 043381 70 MLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERF-SELTPTSKPRMCHSTSVVLPDGKILVAGSNPH 146 (286)
Q Consensus 70 ~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~w-t~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~~ 146 (286)
...-|||+.+++++.+. ...+||-.+. +- ...................++++.+++|+...
T Consensus 198 ~~~~~~~~~l~~~~~d~-------------~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg 259 (312)
T 4ery_A 198 VKFSPNGKYILAATLDN-------------TLKLWDYSKG---KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDN 259 (312)
T ss_dssp EEECTTSSEEEEEETTT-------------EEEEEETTTT---EEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTS
T ss_pred EEECCCCCEEEEEcCCC-------------eEEEEECCCC---cEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCC
Confidence 45679999999988651 3468887665 32 22222211121122234457899999998543
No 53
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=71.15 E-value=24 Score=31.15 Aligned_cols=63 Identities=14% Similarity=0.139 Sum_probs=38.4
Q ss_pred ceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCc---------------cc---eee
Q 043381 69 EMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRM---------------CH---STS 130 (286)
Q Consensus 69 ~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~---------------yH---S~A 130 (286)
+...-|||+.+++++.+. +..+||-..+...++..+.....++. .+ ...
T Consensus 245 ~~~~s~~~~~l~s~s~d~-------------~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (355)
T 3vu4_A 245 DMKWSTDGSKLAVVSDKW-------------TLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKI 311 (355)
T ss_dssp EEEECTTSCEEEEEETTC-------------EEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEE
T ss_pred EEEECCCCCEEEEEECCC-------------EEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEE
Confidence 345679999999998651 34577766554445555433211111 11 345
Q ss_pred EEcCCCcEEEeCCC
Q 043381 131 VVLPDGKILVAGSN 144 (286)
Q Consensus 131 ~LLpDGrVlv~GG~ 144 (286)
..-+||+.+++|+.
T Consensus 312 a~~~d~~~l~~~~~ 325 (355)
T 3vu4_A 312 AWISESSLVVVWPH 325 (355)
T ss_dssp EESSSSEEEEEETT
T ss_pred EEeCCCCEEEEEeC
Confidence 56789988888875
No 54
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=71.03 E-value=41 Score=28.35 Aligned_cols=55 Identities=7% Similarity=0.173 Sum_probs=32.5
Q ss_pred EEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCce-EEcCCCCCCCccceeeEEcCCCcEEEeCCC
Q 043381 71 LLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERF-SELTPTSKPRMCHSTSVVLPDGKILVAGSN 144 (286)
Q Consensus 71 v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~w-t~~a~~~~~R~yHS~A~LLpDGrVlv~GG~ 144 (286)
...++|+.+++|+.+. ...+||..+. +- ..+... ... -. ....-|+++.++.++.
T Consensus 244 ~~~~~~~~l~sg~~dg-------------~i~vwd~~~~---~~~~~~~~h-~~~-v~-~~~~~p~~~~l~s~~~ 299 (312)
T 4ery_A 244 FSVTGGKWIVSGSEDN-------------LVYIWNLQTK---EIVQKLQGH-TDV-VI-STACHPTENIIASAAL 299 (312)
T ss_dssp EECSSSCEEEECCTTS-------------CEEEEETTTC---CEEEEECCC-SSC-EE-EEEECSSSSEEEEEEC
T ss_pred EEeCCCcEEEEECCCC-------------EEEEEECCCc---hhhhhhhcc-CCc-EE-EEeecCcCCceEEEEc
Confidence 3457899999988652 3468888765 32 222211 111 11 2345689999888763
No 55
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=70.94 E-value=13 Score=33.62 Aligned_cols=59 Identities=17% Similarity=0.193 Sum_probs=35.7
Q ss_pred eEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCCCC
Q 043381 70 MLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPH 146 (286)
Q Consensus 70 ~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~~ 146 (286)
....|||+++++|+.+. +..+||..+. +-.. .+.--...-......|||+.+++|+.+.
T Consensus 156 v~~~~~~~~l~sgs~D~-------------~i~iwd~~~~---~~~~--~~~~h~~~V~~v~~~p~~~~l~s~s~D~ 214 (410)
T 1vyh_C 156 ISFDHSGKLLASCSADM-------------TIKLWDFQGF---ECIR--TMHGHDHNVSSVSIMPNGDHIVSASRDK 214 (410)
T ss_dssp EEECTTSSEEEEEETTS-------------CCCEEETTSS---CEEE--CCCCCSSCEEEEEECSSSSEEEEEETTS
T ss_pred EEEcCCCCEEEEEeCCC-------------eEEEEeCCCC---ceeE--EEcCCCCCEEEEEEeCCCCEEEEEeCCC
Confidence 35679999999998762 2358887654 2211 1111111223455678999999988544
No 56
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=70.75 E-value=31 Score=29.49 Aligned_cols=63 Identities=10% Similarity=0.104 Sum_probs=34.9
Q ss_pred ceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEE-cCCCCCCCccceeeEEcCCCcEEEeCCC
Q 043381 69 EMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSE-LTPTSKPRMCHSTSVVLPDGKILVAGSN 144 (286)
Q Consensus 69 ~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~-~a~~~~~R~yHS~A~LLpDGrVlv~GG~ 144 (286)
....-+||++||....... ......+||+++. +.+. +....... .......-|||++|++...
T Consensus 91 ~i~~~~dg~l~v~~~~~~~---------~~~~i~~~d~~~~---~~~~~~~~~~~~~-~~~~i~~d~~g~l~v~~~~ 154 (333)
T 2dg1_A 91 AIKIHKDGRLFVCYLGDFK---------STGGIFAATENGD---NLQDIIEDLSTAY-CIDDMVFDSKGGFYFTDFR 154 (333)
T ss_dssp EEEECTTSCEEEEECTTSS---------SCCEEEEECTTSC---SCEEEECSSSSCC-CEEEEEECTTSCEEEEECC
T ss_pred eEEECCCCcEEEEeCCCCC---------CCceEEEEeCCCC---EEEEEEccCccCC-cccceEECCCCCEEEEecc
Confidence 3455689999987543200 0013458999887 5542 22111111 2223455789999998653
No 57
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=70.27 E-value=25 Score=29.84 Aligned_cols=62 Identities=11% Similarity=0.067 Sum_probs=37.6
Q ss_pred ceEEeC-CCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceE-EcCCCCCCCccceeeEEcCCCcEEEeCCCCC
Q 043381 69 EMLLLP-TGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFS-ELTPTSKPRMCHSTSVVLPDGKILVAGSNPH 146 (286)
Q Consensus 69 ~~v~Lp-dG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt-~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~~ 146 (286)
+....| ||+++++|+.+. ...+||..+. +.. .+.........-......|||+.+++|+...
T Consensus 120 ~~~~~~~~~~~l~s~~~dg-------------~i~iwd~~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 183 (366)
T 3k26_A 120 ELKFHPRDPNLLLSVSKDH-------------ALRLWNIQTD---TLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDH 183 (366)
T ss_dssp EEEECSSCTTEEEEEETTS-------------CEEEEETTTT---EEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEECCCCCCEEEEEeCCC-------------eEEEEEeecC---eEEEEecccccccCceeEEEECCCCCEEEEecCCC
Confidence 345678 999999988651 3568998765 332 2321111222223355568999999988543
No 58
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=70.19 E-value=20 Score=30.41 Aligned_cols=95 Identities=17% Similarity=0.181 Sum_probs=49.9
Q ss_pred ccEEEEEcCCCCCCCcccCCCccccccCcEEEEEecCCCCCeEee-cCCCCccccceEEeCCCc-EEEEcCccCCCCCcc
Q 043381 15 RAEVLICGGAKPEAGMLAGKGEFMNALQDCGRIEITNKSATWQRE-MMPSPRVMGEMLLLPTGD-VLIINGAKKGTAGWN 92 (286)
Q Consensus 15 ~~~Vlv~GG~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~~~R~~~~~v~LpdG~-VlvvGG~~~g~ag~~ 92 (286)
.+++|++++.+ .+..++|+.. .+.... +.+....-+....-|||+ +|+.+...
T Consensus 10 ~~~~~v~~~~~----------------~~v~~~d~~~--~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~------- 64 (349)
T 1jmx_B 10 GHEYMIVTNYP----------------NNLHVVDVAS--DTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHY------- 64 (349)
T ss_dssp TCEEEEEEETT----------------TEEEEEETTT--TEEEEEEECSSCCSSCEEEECTTSSEEEEEETTT-------
T ss_pred CCEEEEEeCCC----------------CeEEEEECCC--CcEEEEEecCCCCCCceeEECCCCCEEEEEeCCC-------
Confidence 56778877653 2456777753 333222 333211234556789997 56665322
Q ss_pred CCCCCCCccEEecCCCCCCCceEEcCCCCC-----CCccceeeEEcCCCcEEEeCCC
Q 043381 93 FATDPNTTPVLYEPNDPINERFSELTPTSK-----PRMCHSTSVVLPDGKILVAGSN 144 (286)
Q Consensus 93 ~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~-----~R~yHS~A~LLpDGrVlv~GG~ 144 (286)
....+||+.+. +....-.... ...-+ ...+-|||+.+++++.
T Consensus 65 ------~~i~~~d~~t~---~~~~~~~~~~~~~~~~~~~~-~~~~spdg~~l~~~~~ 111 (349)
T 1jmx_B 65 ------GDIYGIDLDTC---KNTFHANLSSVPGEVGRSMY-SFAISPDGKEVYATVN 111 (349)
T ss_dssp ------TEEEEEETTTT---EEEEEEESCCSTTEEEECSS-CEEECTTSSEEEEEEE
T ss_pred ------CcEEEEeCCCC---cEEEEEEccccccccccccc-ceEECCCCCEEEEEcc
Confidence 13468998876 4432111111 11112 2456789987777663
No 59
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=69.47 E-value=21 Score=30.27 Aligned_cols=96 Identities=15% Similarity=0.210 Sum_probs=52.4
Q ss_pred cEEEEEcCCCCCCCcccCCCccccccCcEEEEEecCCCCCeEee-cCCCCccccceEEeCCCcEEEEcCccCCCCCccCC
Q 043381 16 AEVLICGGAKPEAGMLAGKGEFMNALQDCGRIEITNKSATWQRE-MMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFA 94 (286)
Q Consensus 16 ~~Vlv~GG~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~~~R~~~~~v~LpdG~VlvvGG~~~g~ag~~~~ 94 (286)
++.|++|+.+ ....++|+......-... .-..... .+....|||+.+++++.+.
T Consensus 54 g~~l~~~~~d----------------g~i~iw~~~~~~~~~~~~~~~h~~~v-~~~~~~~~~~~l~s~~~dg-------- 108 (368)
T 3mmy_A 54 GNFLIAGSWA----------------NDVRCWEVQDSGQTIPKAQQMHTGPV-LDVCWSDDGSKVFTASCDK-------- 108 (368)
T ss_dssp SEEEEEEETT----------------SEEEEEEECTTSCEEEEEEEECSSCE-EEEEECTTSSEEEEEETTS--------
T ss_pred ceEEEEECCC----------------CcEEEEEcCCCCceeEEEeccccCCE-EEEEECcCCCEEEEEcCCC--------
Confidence 6777777764 234567765311111111 2122223 3346788999999988651
Q ss_pred CCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEE-cCCCcEEEeCCCCC
Q 043381 95 TDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVV-LPDGKILVAGSNPH 146 (286)
Q Consensus 95 ~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~L-LpDGrVlv~GG~~~ 146 (286)
...+||..+. +...+.. ....-.+.+.. -+||+.+++|+...
T Consensus 109 -----~v~iwd~~~~---~~~~~~~--~~~~v~~~~~~~~~~~~~l~~~~~dg 151 (368)
T 3mmy_A 109 -----TAKMWDLSSN---QAIQIAQ--HDAPVKTIHWIKAPNYSCVMTGSWDK 151 (368)
T ss_dssp -----EEEEEETTTT---EEEEEEE--CSSCEEEEEEEECSSCEEEEEEETTS
T ss_pred -----cEEEEEcCCC---Cceeecc--ccCceEEEEEEeCCCCCEEEEccCCC
Confidence 3568998877 4443211 11111222221 68999888888544
No 60
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=69.42 E-value=12 Score=33.16 Aligned_cols=75 Identities=16% Similarity=0.275 Sum_probs=44.8
Q ss_pred CCCeEeecCCCCccccceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCC--ccceee
Q 043381 53 SATWQREMMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPR--MCHSTS 130 (286)
Q Consensus 53 ~~~W~~~~M~~~R~~~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R--~yHS~A 130 (286)
...|+....+..+.....+..++|++|+++.. | .+|--.++.|++|+.+..-.++. ..++.+
T Consensus 193 G~tW~~~~~~~~~~~~~~~~~~~g~~~~~~~~--G--------------~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~ 256 (327)
T 2xbg_A 193 QTAWEPHNRTTSRRLHNMGFTPDGRLWMIVNG--G--------------KIAFSDPDNSENWGELLSPLRRNSVGFLDLA 256 (327)
T ss_dssp CSSCEEEECCSSSCEEEEEECTTSCEEEEETT--T--------------EEEEEETTEEEEECCCBCTTSSCCSCEEEEE
T ss_pred CCceeECCCCCCCccceeEECCCCCEEEEeCC--c--------------eEEEecCCCCCeeEeccCCcccCCcceEEEE
Confidence 46788765555566677777899999987642 1 12211123456898765321222 234433
Q ss_pred EEcCCCcEEEeCCC
Q 043381 131 VVLPDGKILVAGSN 144 (286)
Q Consensus 131 ~LLpDGrVlv~GG~ 144 (286)
..++++++++|++
T Consensus 257 -~~~~~~~~~~g~~ 269 (327)
T 2xbg_A 257 -YRTPNEVWLAGGA 269 (327)
T ss_dssp -ESSSSCEEEEEST
T ss_pred -ecCCCEEEEEeCC
Confidence 4578999998874
No 61
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=69.07 E-value=49 Score=27.53 Aligned_cols=56 Identities=11% Similarity=0.260 Sum_probs=33.8
Q ss_pred cceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcC---CCCCCCccceeeEEcCCCcEEEeCC
Q 043381 68 GEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELT---PTSKPRMCHSTSVVLPDGKILVAGS 143 (286)
Q Consensus 68 ~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a---~~~~~R~yHS~A~LLpDGrVlv~GG 143 (286)
.+..+-+||++||.+.... ...+||+... ....+. ....+ ++ ..+-+||++||+..
T Consensus 124 ~~i~~~~~g~l~v~~~~~~-------------~i~~~~~~g~---~~~~~~~~~~~~~p---~~-i~~~~~g~l~v~~~ 182 (286)
T 1q7f_A 124 RGVTVDNKGRIIVVECKVM-------------RVIIFDQNGN---VLHKFGCSKHLEFP---NG-VVVNDKQEIFISDN 182 (286)
T ss_dssp EEEEECTTSCEEEEETTTT-------------EEEEECTTSC---EEEEEECTTTCSSE---EE-EEECSSSEEEEEEG
T ss_pred eEEEEeCCCCEEEEECCCC-------------EEEEEcCCCC---EEEEeCCCCccCCc---EE-EEECCCCCEEEEEC
Confidence 3445679999999765321 3458888654 444432 22222 23 44568999999865
No 62
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=68.79 E-value=20 Score=31.28 Aligned_cols=86 Identities=17% Similarity=0.249 Sum_probs=44.3
Q ss_pred CCeEeecCCCCccccceEEeCCCcEEEEcCccCCCCCccCCCCCC-----------CccEEecCCCCCCCceEEcCCCCC
Q 043381 54 ATWQREMMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPN-----------TTPVLYEPNDPINERFSELTPTSK 122 (286)
Q Consensus 54 ~~W~~~~M~~~R~~~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~-----------~~~e~YdP~t~~g~~wt~~a~~~~ 122 (286)
..|...........+ ..+-|||++||++........+....... -+..+||+.+. +.........
T Consensus 14 ~~wp~~~~~l~~v~~-va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g---~~~~~~~~~~ 89 (329)
T 3fvz_A 14 LDWPGVYLLPGQVSG-VALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNA---EILQSSGKNL 89 (329)
T ss_dssp TTCGGGGCCCSCEEE-EEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTC---CEEEEECTTT
T ss_pred cCCchhceecCCceE-EEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCC---eEEeccCCCc
Confidence 567544333333333 35678999999876542111111111111 13568999876 5443211111
Q ss_pred CCccceeeEEcCCCcEEEeCCC
Q 043381 123 PRMCHSTSVVLPDGKILVAGSN 144 (286)
Q Consensus 123 ~R~yHS~A~LLpDGrVlv~GG~ 144 (286)
-..-++.|+ -+||++||+...
T Consensus 90 ~~~p~gia~-d~~g~l~v~d~~ 110 (329)
T 3fvz_A 90 FYLPHGLSI-DTDGNYWVTDVA 110 (329)
T ss_dssp CSSEEEEEE-CTTSCEEEEETT
T ss_pred cCCceEEEE-CCCCCEEEEECC
Confidence 112234444 589999998764
No 63
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=68.57 E-value=14 Score=32.06 Aligned_cols=87 Identities=6% Similarity=0.051 Sum_probs=42.5
Q ss_pred cEEEEEecCCCCCeEee-cCCCCccccceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCC
Q 043381 43 DCGRIEITNKSATWQRE-MMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTS 121 (286)
Q Consensus 43 s~~~id~~~~~~~W~~~-~M~~~R~~~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~ 121 (286)
...++++...+.+++.. .......-...++-|||++|+++... .. ....+||..+. +++.+....
T Consensus 17 ~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~~--~~---------~~v~~~~~~~g---~~~~~~~~~ 82 (347)
T 3hfq_A 17 GIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKED--DE---------GGIAAWQIDGQ---TAHKLNTVV 82 (347)
T ss_dssp EEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEET--TE---------EEEEEEEEETT---EEEEEEEEE
T ss_pred CEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEecC--CC---------ceEEEEEecCC---cEEEeeeee
Confidence 44455555445666542 11111222335678999977765421 00 13458888666 555443311
Q ss_pred CCCccceeeEEcCCCcEEEeCC
Q 043381 122 KPRMCHSTSVVLPDGKILVAGS 143 (286)
Q Consensus 122 ~~R~yHS~A~LLpDGrVlv~GG 143 (286)
..........+-|||+.+++.+
T Consensus 83 ~~~~~p~~~a~spdg~~l~~~~ 104 (347)
T 3hfq_A 83 APGTPPAYVAVDEARQLVYSAN 104 (347)
T ss_dssp EESCCCSEEEEETTTTEEEEEE
T ss_pred cCCCCCEEEEECCCCCEEEEEe
Confidence 1111112244578998444443
No 64
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=67.61 E-value=14 Score=32.23 Aligned_cols=58 Identities=19% Similarity=0.206 Sum_probs=34.6
Q ss_pred eEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCCC
Q 043381 70 MLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNP 145 (286)
Q Consensus 70 ~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~ 145 (286)
...-|||+.+++|+.+. ...+||..+. +.-..+.... .+. .....-|||+.+++||.+
T Consensus 276 ~~~s~~g~~l~~g~~d~-------------~i~vwd~~~~--~~~~~~~~h~-~~v--~~~~~s~dg~~l~s~s~D 333 (340)
T 1got_B 276 VSFSKSGRLLLAGYDDF-------------NCNVWDALKA--DRAGVLAGHD-NRV--SCLGVTDDGMAVATGSWD 333 (340)
T ss_dssp EEECTTSSEEEEEETTS-------------EEEEEETTTC--CEEEEEECCS-SCE--EEEEECTTSSCEEEEETT
T ss_pred EEECCCCCEEEEECCCC-------------eEEEEEcccC--cEeeEeecCC-CcE--EEEEEcCCCCEEEEEcCC
Confidence 35679999999988651 3568887654 1222222111 111 123446899999998853
No 65
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=67.57 E-value=14 Score=32.80 Aligned_cols=58 Identities=24% Similarity=0.174 Sum_probs=35.5
Q ss_pred eEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCCC
Q 043381 70 MLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNP 145 (286)
Q Consensus 70 ~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~ 145 (286)
...-|||+.+++|+.+. +..+||..+. +....+... ...-.....-|||+.|++|+.+
T Consensus 290 ~~~s~~g~~l~~g~~d~-------------~i~vwd~~~~--~~~~~l~~h---~~~v~~l~~spdg~~l~sgs~D 347 (354)
T 2pbi_B 290 VDFSLSGRLLFAGYNDY-------------TINVWDVLKG--SRVSILFGH---ENRVSTLRVSPDGTAFCSGSWD 347 (354)
T ss_dssp EEECTTSSEEEEEETTS-------------CEEEEETTTC--SEEEEECCC---SSCEEEEEECTTSSCEEEEETT
T ss_pred EEEeCCCCEEEEEECCC-------------cEEEEECCCC--ceEEEEECC---CCcEEEEEECCCCCEEEEEcCC
Confidence 34568999999988651 3568987654 123332211 1112234457999999999853
No 66
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=67.25 E-value=26 Score=29.62 Aligned_cols=59 Identities=10% Similarity=0.185 Sum_probs=35.8
Q ss_pred ceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceE-EcCCCCCCCccceeeEEcCCCcEEEeCCCCCC
Q 043381 69 EMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFS-ELTPTSKPRMCHSTSVVLPDGKILVAGSNPHS 147 (286)
Q Consensus 69 ~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt-~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~~~ 147 (286)
+....|||+.+++|+.+ | ...+||..+. +.. .+....... - .++. |||+.+++||....
T Consensus 256 ~~~~s~~~~~l~~~~~d-g------------~i~vwd~~~~---~~~~~~~~~h~~~-v--~~~~-~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 256 SIEFSPRHKFLYTAGSD-G------------IISCWNLQTR---KKIKNFAKFNEDS-V--VKIA-CSDNILCLATSDDT 315 (342)
T ss_dssp EEEECTTTCCEEEEETT-S------------CEEEEETTTT---EEEEECCCCSSSE-E--EEEE-ECSSEEEEEEECTH
T ss_pred EEEEcCCCCEEEEecCC-c------------eEEEEcCccH---hHhhhhhcccCCC-c--eEec-CCCCeEEEEecCCc
Confidence 44677899999988865 1 3468998765 332 222110111 1 2333 89999999986544
No 67
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=66.61 E-value=37 Score=29.77 Aligned_cols=28 Identities=14% Similarity=0.230 Sum_probs=20.1
Q ss_pred ceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCC
Q 043381 69 EMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDP 109 (286)
Q Consensus 69 ~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~ 109 (286)
+....|||+.+++++.+. ...+||..+.
T Consensus 186 ~~~~~~~~~~l~s~~~d~-------------~v~iwd~~~~ 213 (420)
T 3vl1_A 186 DIAIIDRGRNVLSASLDG-------------TIRLWECGTG 213 (420)
T ss_dssp EEEEETTTTEEEEEETTS-------------CEEEEETTTT
T ss_pred EEEEcCCCCEEEEEcCCC-------------cEEEeECCCC
Confidence 346789999999988652 3467887654
No 68
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=66.44 E-value=9.9 Score=33.21 Aligned_cols=60 Identities=12% Similarity=0.098 Sum_probs=35.8
Q ss_pred cceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCCCC
Q 043381 68 GEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPH 146 (286)
Q Consensus 68 ~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~~ 146 (286)
.+....|||+.+++|+.+ | ...+||.... ....+... ...-......|||+.+++|+...
T Consensus 112 ~~~~~s~~~~~l~~~~~d-g------------~i~i~~~~~~---~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~d~ 171 (425)
T 1r5m_A 112 TCLAWSHDGNSIVTGVEN-G------------ELRLWNKTGA---LLNVLNFH---RAPIVSVKWNKDGTHIISMDVEN 171 (425)
T ss_dssp EEEEECTTSSEEEEEETT-S------------CEEEEETTSC---EEEEECCC---CSCEEEEEECTTSSEEEEEETTC
T ss_pred EEEEEcCCCCEEEEEeCC-C------------eEEEEeCCCC---eeeeccCC---CccEEEEEECCCCCEEEEEecCC
Confidence 345678999999998865 1 3468883322 33333221 11122345578999888887543
No 69
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=66.23 E-value=24 Score=29.93 Aligned_cols=60 Identities=13% Similarity=0.225 Sum_probs=38.3
Q ss_pred cceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceE-EcCCCCCCCccceeeEEcCCCcEEEeCCCCC
Q 043381 68 GEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFS-ELTPTSKPRMCHSTSVVLPDGKILVAGSNPH 146 (286)
Q Consensus 68 ~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt-~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~~ 146 (286)
.+....|||+.+++++.+. ...+||..+. +.. .+. ....-....+.|||+.+++|+...
T Consensus 222 ~~~~~~~~~~~l~~~~~d~-------------~i~v~d~~~~---~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~ 281 (369)
T 3zwl_B 222 SDMQFSPDLTYFITSSRDT-------------NSFLVDVSTL---QVLKKYE----TDCPLNTAVITPLKEFIILGGGQE 281 (369)
T ss_dssp EEEEECTTSSEEEEEETTS-------------EEEEEETTTC---CEEEEEE----CSSCEEEEEECSSSSEEEEEECCC
T ss_pred eEEEECCCCCEEEEecCCc-------------eEEEEECCCC---ceeeeec----CCCCceeEEecCCCceEEEeecCC
Confidence 3456779999999987541 3468888765 332 222 112223466789999999988655
Q ss_pred C
Q 043381 147 S 147 (286)
Q Consensus 147 ~ 147 (286)
.
T Consensus 282 ~ 282 (369)
T 3zwl_B 282 A 282 (369)
T ss_dssp -
T ss_pred C
Confidence 3
No 70
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=65.51 E-value=49 Score=27.23 Aligned_cols=58 Identities=12% Similarity=0.084 Sum_probs=33.6
Q ss_pred ceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCC
Q 043381 69 EMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSN 144 (286)
Q Consensus 69 ~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~ 144 (286)
..++-++|++|+...... ....||+. . ++....-......-++.+ +.+||++|++...
T Consensus 66 ~i~~~~~g~l~v~~~~~~-------------~v~~~d~~-g---~~~~~~~~~~~~~~~~i~-~~~~g~l~v~~~~ 123 (300)
T 2qc5_A 66 CLIVSSLGDIWFTENGAN-------------KIGKLSKK-G---GFTEYPLPQPDSGPYGIT-EGLNGDIWFTQLN 123 (300)
T ss_dssp EEEECTTSCEEEEETTTT-------------EEEEECTT-S---CEEEEECSSTTCCEEEEE-ECSTTCEEEEETT
T ss_pred eEEECCCCCEEEEecCCC-------------eEEEECCC-C---CeEEecCCCCCCCCccce-ECCCCCEEEEccC
Confidence 445568999999754221 23578887 5 555332111112334444 4589999998653
No 71
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=65.05 E-value=28 Score=30.25 Aligned_cols=63 Identities=13% Similarity=0.170 Sum_probs=36.1
Q ss_pred eEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCCCC
Q 043381 70 MLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPH 146 (286)
Q Consensus 70 ~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~~ 146 (286)
...-|||+.|++|+.+. +..+||.... ++.+..+..+.--...-.....-|||+.|++|+.+.
T Consensus 113 v~~sp~g~~las~s~D~-------------~v~iwd~~~~-~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~ 175 (330)
T 2hes_X 113 VAWSNDGYYLATCSRDK-------------SVWIWETDES-GEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDD 175 (330)
T ss_dssp EEECTTSCEEEEEETTS-------------CEEEEECCTT-CCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTS
T ss_pred EEECCCCCEEEEEeCCC-------------EEEEEeccCC-CCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCC
Confidence 35679999999998762 3468887432 113332221111111112234568999999998644
No 72
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=64.76 E-value=18 Score=32.26 Aligned_cols=99 Identities=12% Similarity=0.068 Sum_probs=52.1
Q ss_pred ccEEEEEcCCCCCCCcccCCCccccccCcEEEEEecCCCCCeEeecCCCCccccceEEeCCCcEEEEcCccCCCCCccCC
Q 043381 15 RAEVLICGGAKPEAGMLAGKGEFMNALQDCGRIEITNKSATWQREMMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFA 94 (286)
Q Consensus 15 ~~~Vlv~GG~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~~M~~~R~~~~~v~LpdG~VlvvGG~~~g~ag~~~~ 94 (286)
+++.|++|+.+ ....++|+......++...-+....-.+...-|||+.+++|+.+ |
T Consensus 181 ~~~~l~~~~~d----------------~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d-g------- 236 (437)
T 3gre_A 181 EKSLLVALTNL----------------SRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTR-G------- 236 (437)
T ss_dssp SCEEEEEEETT----------------SEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETT-S-------
T ss_pred CCCEEEEEeCC----------------CeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCC-C-------
Confidence 46777777764 24556777543223332211122222344567899999999866 1
Q ss_pred CCCCCccEEecCCCCCCCceE-EcCCCCCCCccceee---EEcCCCcEEEeCCCCC
Q 043381 95 TDPNTTPVLYEPNDPINERFS-ELTPTSKPRMCHSTS---VVLPDGKILVAGSNPH 146 (286)
Q Consensus 95 ~~~~~~~e~YdP~t~~g~~wt-~~a~~~~~R~yHS~A---~LLpDGrVlv~GG~~~ 146 (286)
...+||..+. +.. .+......+ -.+.+ ..-+||+.+++|+...
T Consensus 237 -----~i~iwd~~~~---~~~~~~~~~~~~~-v~~~~~~~~~s~~~~~l~s~~~dg 283 (437)
T 3gre_A 237 -----IIDIWDIRFN---VLIRSWSFGDHAP-ITHVEVCQFYGKNSVIVVGGSSKT 283 (437)
T ss_dssp -----CEEEEETTTT---EEEEEEBCTTCEE-EEEEEECTTTCTTEEEEEEESTTE
T ss_pred -----eEEEEEcCCc---cEEEEEecCCCCc-eEEEEeccccCCCccEEEEEcCCC
Confidence 3568998765 332 111100001 01111 1126898999988644
No 73
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=64.15 E-value=42 Score=30.13 Aligned_cols=59 Identities=12% Similarity=0.045 Sum_probs=33.6
Q ss_pred eCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceE-EcCCCC--CCCccceeeEEcCCCcEEEeCCCCCC
Q 043381 73 LPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFS-ELTPTS--KPRMCHSTSVVLPDGKILVAGSNPHS 147 (286)
Q Consensus 73 LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt-~~a~~~--~~R~yHS~A~LLpDGrVlv~GG~~~~ 147 (286)
-.+++.+++|+.+. ...+||..+. +.. .+.... .....-.....-|||+++++|+....
T Consensus 369 ~~~~~~l~s~~~dg-------------~v~iwd~~~~---~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~ 430 (445)
T 2ovr_B 369 QFNKNFVITSSDDG-------------TVKLWDLKTG---EFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGT 430 (445)
T ss_dssp EECSSEEEEEETTS-------------EEEEEETTTC---CEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSS
T ss_pred EECCCEEEEEeCCC-------------eEEEEECCCC---ceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCC
Confidence 34889999988651 3468998776 432 221110 01111112334589999999986543
No 74
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=63.96 E-value=70 Score=28.23 Aligned_cols=62 Identities=16% Similarity=0.151 Sum_probs=37.1
Q ss_pred ceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCce-EEcCCCCCCC-ccceeeEEcCCCcEEEeCCCCC
Q 043381 69 EMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERF-SELTPTSKPR-MCHSTSVVLPDGKILVAGSNPH 146 (286)
Q Consensus 69 ~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~w-t~~a~~~~~R-~yHS~A~LLpDGrVlv~GG~~~ 146 (286)
....-|||+.+++|+.+ | ...+||..+. +. ..+....... ..-.....-|||+.|+.||.+.
T Consensus 303 ~~~~s~~g~~l~~g~~d-g------------~i~vwd~~~~---~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~ 366 (380)
T 3iz6_a 303 SVAFSISGRLLFAGYSN-G------------DCYVWDTLLA---EMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDK 366 (380)
T ss_dssp EEEECSSSSEEEEECTT-S------------CEEEEETTTC---CEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTS
T ss_pred EEEECCCCCEEEEEECC-C------------CEEEEECCCC---ceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCC
Confidence 34567899999998865 1 3568997765 32 2232211111 0112244568999999999643
No 75
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=63.85 E-value=24 Score=31.13 Aligned_cols=97 Identities=11% Similarity=0.059 Sum_probs=52.1
Q ss_pred CccEEEEEcCCCCCCCcccCCCccccccCcEEEEEecCCCCCeEeecCCCCccccceEEeCCCc-EEEEcCccCCCCCcc
Q 043381 14 IRAEVLICGGAKPEAGMLAGKGEFMNALQDCGRIEITNKSATWQREMMPSPRVMGEMLLLPTGD-VLIINGAKKGTAGWN 92 (286)
Q Consensus 14 ~~~~Vlv~GG~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~~M~~~R~~~~~v~LpdG~-VlvvGG~~~g~ag~~ 92 (286)
.+++.|++|+.+ ....++|+.......+. .......-.+....|||+ ++++|+.+ |
T Consensus 257 ~~~~~l~~~~~d----------------g~i~i~d~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~g~~d-g----- 313 (420)
T 3vl1_A 257 TYGKYVIAGHVS----------------GVITVHNVFSKEQTIQL-PSKFTCSCNSLTVDGNNANYIYAGYEN-G----- 313 (420)
T ss_dssp CTTEEEEEEETT----------------SCEEEEETTTCCEEEEE-CCTTSSCEEEEEECSSCTTEEEEEETT-S-----
T ss_pred CCCCEEEEEcCC----------------CeEEEEECCCCceeEEc-ccccCCCceeEEEeCCCCCEEEEEeCC-C-----
Confidence 367777777764 23456776532212221 222222233456789998 88888865 1
Q ss_pred CCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCC
Q 043381 93 FATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSN 144 (286)
Q Consensus 93 ~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~ 144 (286)
...+||..+... ....+... ....-.++..+||+.|++|+.
T Consensus 314 -------~i~vwd~~~~~~-~~~~~~~~---~~~~v~~~~~~~~~~l~s~~~ 354 (420)
T 3vl1_A 314 -------MLAQWDLRSPEC-PVGEFLIN---EGTPINNVYFAAGALFVSSGF 354 (420)
T ss_dssp -------EEEEEETTCTTS-CSEEEEES---TTSCEEEEEEETTEEEEEETT
T ss_pred -------eEEEEEcCCCcC-chhhhhcc---CCCCceEEEeCCCCEEEEecC
Confidence 346888876511 01111110 111123445679999999874
No 76
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=63.30 E-value=60 Score=26.47 Aligned_cols=57 Identities=14% Similarity=0.072 Sum_probs=33.7
Q ss_pred cceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCC
Q 043381 68 GEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGS 143 (286)
Q Consensus 68 ~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG 143 (286)
.+.++-+||++||... . + ....||+... ............ -++ ..+.+||++|++..
T Consensus 70 ~~i~~~~~g~l~v~~~-~-~------------~i~~~d~~~~---~~~~~~~~~~~~-p~~-i~~~~~g~l~v~~~ 126 (270)
T 1rwi_B 70 QGLAVDGAGTVYVTDF-N-N------------RVVTLAAGSN---NQTVLPFDGLNY-PEG-LAVDTQGAVYVADR 126 (270)
T ss_dssp CCEEECTTCCEEEEET-T-T------------EEEEECTTCS---CCEECCCCSCSS-EEE-EEECTTCCEEEEEG
T ss_pred ceeEECCCCCEEEEcC-C-C------------EEEEEeCCCc---eEeeeecCCcCC-Ccc-eEECCCCCEEEEEC
Confidence 3456678999999865 2 1 2357888776 444432211111 223 34467999999854
No 77
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=62.90 E-value=22 Score=34.16 Aligned_cols=57 Identities=19% Similarity=0.256 Sum_probs=34.4
Q ss_pred eEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccce----eeEEcCCCcEEEeCCCC
Q 043381 70 MLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHS----TSVVLPDGKILVAGSNP 145 (286)
Q Consensus 70 ~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS----~A~LLpDGrVlv~GG~~ 145 (286)
...-|||+.|++++.+. +..+||..++ ........ ...|. ....-|||+.|+.|+.+
T Consensus 497 v~fspdg~~las~s~d~-------------~v~~w~~~~~----~~~~~~~~--~~~H~~~V~~v~fspdg~~lasgs~D 557 (611)
T 1nr0_A 497 VAFSNNGAFLVATDQSR-------------KVIPYSVANN----FELAHTNS--WTFHTAKVACVSWSPDNVRLATGSLD 557 (611)
T ss_dssp EEECTTSSEEEEEETTS-------------CEEEEEGGGT----TEESCCCC--CCCCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEECCCCCEEEEEcCCC-------------CEEEEEcCCC----Cceeeeee--eeecccceeEEEECCCCCEEEEEECC
Confidence 45679999999988652 3457887652 11111100 01132 34457999999999853
No 78
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=62.44 E-value=21 Score=33.09 Aligned_cols=60 Identities=12% Similarity=0.188 Sum_probs=36.5
Q ss_pred cceEEeC----------CCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCc
Q 043381 68 GEMLLLP----------TGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGK 137 (286)
Q Consensus 68 ~~~v~Lp----------dG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGr 137 (286)
.+....| ||+++++|+.+. ...+||..+.. +....+... ...-......|||+
T Consensus 535 ~~~~~sp~~~~~~~~~~~~~~l~~~~~dg-------------~i~iw~~~~~~-~~~~~~~~h---~~~v~~l~~s~~~~ 597 (615)
T 1pgu_A 535 NAISWKPAEKGANEEEIEEDLVATGSLDT-------------NIFIYSVKRPM-KIIKALNAH---KDGVNNLLWETPST 597 (615)
T ss_dssp EEEEECCCC------CCSCCEEEEEETTS-------------CEEEEESSCTT-CCEEETTSS---TTCEEEEEEEETTE
T ss_pred eEEEEcCccccccccccCCCEEEEEcCCC-------------cEEEEECCCCc-eechhhhcC---ccceEEEEEcCCCC
Confidence 3456778 999999998652 35688887641 133333211 11222345679999
Q ss_pred EEEeCCCC
Q 043381 138 ILVAGSNP 145 (286)
Q Consensus 138 Vlv~GG~~ 145 (286)
|++||..
T Consensus 598 -l~s~~~d 604 (615)
T 1pgu_A 598 -LVSSGAD 604 (615)
T ss_dssp -EEEEETT
T ss_pred -eEEecCC
Confidence 8888753
No 79
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=62.28 E-value=42 Score=28.33 Aligned_cols=58 Identities=10% Similarity=0.016 Sum_probs=36.8
Q ss_pred ceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCCC
Q 043381 69 EMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNP 145 (286)
Q Consensus 69 ~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~ 145 (286)
+....|||+.+++++.+. ...+||..+. +....-. .... -....+.|||+.+++++..
T Consensus 79 ~~~~~~~~~~l~s~~~dg-------------~i~iwd~~~~---~~~~~~~--~~~~-v~~~~~~~~~~~l~~~~~~ 136 (369)
T 3zwl_B 79 SIDVDCFTKYCVTGSADY-------------SIKLWDVSNG---QCVATWK--SPVP-VKRVEFSPCGNYFLAILDN 136 (369)
T ss_dssp EEEECTTSSEEEEEETTT-------------EEEEEETTTC---CEEEEEE--CSSC-EEEEEECTTSSEEEEEECC
T ss_pred EEEEcCCCCEEEEEeCCC-------------eEEEEECCCC---cEEEEee--cCCC-eEEEEEccCCCEEEEecCC
Confidence 345678999999988651 3568888765 3322111 1111 2235567899999998765
No 80
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=61.69 E-value=54 Score=28.08 Aligned_cols=85 Identities=9% Similarity=0.160 Sum_probs=40.4
Q ss_pred cEEEEEecCCCCCeEee----cCCCC----ccccceEEeCCCc-EEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCc
Q 043381 43 DCGRIEITNKSATWQRE----MMPSP----RVMGEMLLLPTGD-VLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINER 113 (286)
Q Consensus 43 s~~~id~~~~~~~W~~~----~M~~~----R~~~~~v~LpdG~-VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~ 113 (286)
...++++...+.+++.. .++.. ..-....+-|||+ +|+.+... ....+||...+ | +
T Consensus 210 ~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~-------------~~v~v~~~~~~-g-~ 274 (347)
T 3hfq_A 210 QIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGY-------------NTLAVFAVTAD-G-H 274 (347)
T ss_dssp EEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETT-------------TEEEEEEECGG-G-C
T ss_pred EEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCC-------------CEEEEEEECCC-C-c
Confidence 44566765434455432 23321 2233456789998 55654322 13458886532 1 3
Q ss_pred eEEcCCCCC-CCccceeeEEcCCCcEEEeCC
Q 043381 114 FSELTPTSK-PRMCHSTSVVLPDGKILVAGS 143 (286)
Q Consensus 114 wt~~a~~~~-~R~yHS~A~LLpDGrVlv~GG 143 (286)
++.+..... ...-. ...+-|||+.+++++
T Consensus 275 ~~~~~~~~~~~~~~~-~~~~spdg~~l~v~~ 304 (347)
T 3hfq_A 275 LTLIQQISTEGDFPR-DFDLDPTEAFVVVVN 304 (347)
T ss_dssp EEEEEEEECSSSCCC-EEEECTTSSEEEEEE
T ss_pred EEEeEEEecCCCCcC-eEEECCCCCEEEEEE
Confidence 443332222 11112 344579998544443
No 81
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=61.47 E-value=57 Score=26.82 Aligned_cols=56 Identities=11% Similarity=-0.050 Sum_probs=31.5
Q ss_pred ceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCC
Q 043381 69 EMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGS 143 (286)
Q Consensus 69 ~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG 143 (286)
+..+-+||++||...... ....||| .. ++....-......-++.++ +||++|++..
T Consensus 229 ~i~~~~~g~l~v~~~~~~-------------~i~~~d~-~g---~~~~~~~~~~~~~~~~i~~--~~g~l~v~~~ 284 (299)
T 2z2n_A 229 AITAGAGIDLWFTEWGAN-------------KIGRLTS-NN---IIEEYPIQIKSAEPHGICF--DGETIWFAME 284 (299)
T ss_dssp EEEECSTTCEEEEETTTT-------------EEEEEET-TT---EEEEEECSSSSCCEEEEEE--CSSCEEEEET
T ss_pred eEEECCCCCEEEeccCCc-------------eEEEECC-CC---ceEEEeCCCCCCccceEEe--cCCCEEEEec
Confidence 345568999998753221 2357888 33 4544321111122234444 8999999864
No 82
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=61.05 E-value=18 Score=31.03 Aligned_cols=59 Identities=12% Similarity=0.173 Sum_probs=36.3
Q ss_pred eEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCCCC
Q 043381 70 MLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPH 146 (286)
Q Consensus 70 ~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~~ 146 (286)
....|||+.+++|+.+. +..+||..+. +.-..+... ...-.....-||++.+++|+.+.
T Consensus 61 ~~~~~~~~~l~s~s~d~-------------~i~vwd~~~~--~~~~~~~~h---~~~v~~~~~~~~~~~l~sgs~D~ 119 (304)
T 2ynn_A 61 GKFIARKNWIIVGSDDF-------------RIRVFNYNTG--EKVVDFEAH---PDYIRSIAVHPTKPYVLSGSDDL 119 (304)
T ss_dssp EEEEGGGTEEEEEETTS-------------EEEEEETTTC--CEEEEEECC---SSCEEEEEECSSSSEEEEEETTS
T ss_pred EEEeCCCCEEEEECCCC-------------EEEEEECCCC--cEEEEEeCC---CCcEEEEEEcCCCCEEEEECCCC
Confidence 45778999999988652 3568998775 122222110 11112344568999999988654
No 83
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=61.00 E-value=60 Score=28.13 Aligned_cols=58 Identities=17% Similarity=0.241 Sum_probs=32.1
Q ss_pred cceEEeCCCcEE-EEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcE-EEeCCC
Q 043381 68 GEMLLLPTGDVL-IINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKI-LVAGSN 144 (286)
Q Consensus 68 ~~~v~LpdG~Vl-vvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrV-lv~GG~ 144 (286)
.+...-|||+.+ +.++.+ + +..+||..+. +....-.. ...-+ ...+-|||+. +++|..
T Consensus 35 ~~~~~s~dg~~l~~~~~~d-~------------~i~v~d~~~~---~~~~~~~~--~~~v~-~~~~spdg~~l~~~~~~ 94 (391)
T 1l0q_A 35 MGAVISPDGTKVYVANAHS-N------------DVSIIDTATN---NVIATVPA--GSSPQ-GVAVSPDGKQVYVTNMA 94 (391)
T ss_dssp EEEEECTTSSEEEEEEGGG-T------------EEEEEETTTT---EEEEEEEC--SSSEE-EEEECTTSSEEEEEETT
T ss_pred ceEEECCCCCEEEEECCCC-C------------eEEEEECCCC---eEEEEEEC--CCCcc-ceEECCCCCEEEEEECC
Confidence 455678999854 655433 1 3568999876 44322111 11222 3456789984 456543
No 84
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=60.93 E-value=9.7 Score=33.22 Aligned_cols=61 Identities=13% Similarity=0.102 Sum_probs=41.9
Q ss_pred eEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCCCC
Q 043381 70 MLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPH 146 (286)
Q Consensus 70 ~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~~ 146 (286)
...-|||+.+++|+.+. ...+||..+. .|.....+.--...-......|||+.+++|+...
T Consensus 17 ~~~s~~g~~l~~~~~d~-------------~i~iw~~~~~---~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~ 77 (377)
T 3dwl_C 17 HAFNSQRTEFVTTTATN-------------QVELYEQDGN---GWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDR 77 (377)
T ss_dssp CEECSSSSEEECCCSSS-------------CBCEEEEETT---EEEECCCBCCCSSCEEEEEECTTTCCEEEEETTS
T ss_pred EEECCCCCEEEEecCCC-------------EEEEEEccCC---ceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCC
Confidence 35678999999888651 3458998887 7777665543333333455678999999888544
No 85
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=60.63 E-value=17 Score=33.51 Aligned_cols=74 Identities=18% Similarity=0.218 Sum_probs=42.4
Q ss_pred ccceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCCCC
Q 043381 67 MGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPH 146 (286)
Q Consensus 67 ~~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~~ 146 (286)
.|..++.-||+||..|-...|.-|.+...+....|..-. ....+...++ .-.+|+ ++|..||+||.-|.+.+
T Consensus 304 ~ht~alt~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~---~l~~~v~~ia----~G~~hs-~alt~~G~v~~wG~n~~ 375 (423)
T 3mvd_K 304 HHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVK---KLTEKIVSVG----CGEVCS-YAVTIDGKLYSWGSGVN 375 (423)
T ss_dssp SEEEEEETTCCEEEEECCGGGTTCSSSCCSCEEEEEECT---TCCSCEEEEE----EETTEE-EEEETTSCEEEEECCTT
T ss_pred CeEEEEeCCCcEEEEECCCCCCCCCCCccccccCceEec---cCCCCEEEEE----cCCCeE-EEEcCCCCEEEECCCCC
Confidence 577788889999999987665555442111111121111 1111233322 123676 55578999999998876
Q ss_pred CC
Q 043381 147 SR 148 (286)
Q Consensus 147 ~~ 148 (286)
..
T Consensus 376 Gq 377 (423)
T 3mvd_K 376 NQ 377 (423)
T ss_dssp SC
T ss_pred CC
Confidence 54
No 86
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=60.49 E-value=36 Score=30.33 Aligned_cols=59 Identities=25% Similarity=0.344 Sum_probs=35.8
Q ss_pred ceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcC-CCcEEEeCCCCC
Q 043381 69 EMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLP-DGKILVAGSNPH 146 (286)
Q Consensus 69 ~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLp-DGrVlv~GG~~~ 146 (286)
+....|||+.+++|+.+. +..+||..+. +....-. ....-. ....-| ||+.+++|+...
T Consensus 170 ~~~~~p~~~~l~s~s~d~-------------~v~iwd~~~~---~~~~~~~--~~~~v~-~~~~~~~~~~~l~~~s~d~ 229 (393)
T 1erj_A 170 SLDYFPSGDKLVSGSGDR-------------TVRIWDLRTG---QCSLTLS--IEDGVT-TVAVSPGDGKYIAAGSLDR 229 (393)
T ss_dssp EEEECTTSSEEEEEETTS-------------EEEEEETTTT---EEEEEEE--CSSCEE-EEEECSTTCCEEEEEETTS
T ss_pred EEEEcCCCCEEEEecCCC-------------cEEEEECCCC---eeEEEEE--cCCCcE-EEEEECCCCCEEEEEcCCC
Confidence 345679999999988651 4568998776 4322111 111112 234456 999999998544
No 87
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=60.41 E-value=21 Score=32.26 Aligned_cols=60 Identities=20% Similarity=0.261 Sum_probs=36.7
Q ss_pred ceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCCCC
Q 043381 69 EMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPH 146 (286)
Q Consensus 69 ~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~~ 146 (286)
+....|||+.+++|+.+. +..+||..+. +....+.. .+..-.....-+||+++++|+.+.
T Consensus 197 ~v~~~p~~~~l~s~s~D~-------------~i~~wd~~~~--~~~~~~~~---h~~~v~~~~~~~~g~~l~s~s~D~ 256 (410)
T 1vyh_C 197 SVSIMPNGDHIVSASRDK-------------TIKMWEVQTG--YCVKTFTG---HREWVRMVRPNQDGTLIASCSNDQ 256 (410)
T ss_dssp EEEECSSSSEEEEEETTS-------------EEEEEETTTC--CEEEEEEC---CSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEeCCCCEEEEEeCCC-------------eEEEEECCCC--cEEEEEeC---CCccEEEEEECCCCCEEEEEcCCC
Confidence 345789999999988651 3568988765 11222211 111112344568999999998654
No 88
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=59.69 E-value=42 Score=29.08 Aligned_cols=58 Identities=12% Similarity=0.137 Sum_probs=35.7
Q ss_pred eEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCce-EEcCCCCCCCccceeeEEcCCCcEEEeCCCCC
Q 043381 70 MLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERF-SELTPTSKPRMCHSTSVVLPDGKILVAGSNPH 146 (286)
Q Consensus 70 ~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~w-t~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~~ 146 (286)
....|||+.+++|+.+. +..+||..+. +. ..+... ... -.....-|||+.+++||...
T Consensus 82 ~~~~~~~~~l~s~s~D~-------------~v~lwd~~~~---~~~~~~~~h-~~~--v~~v~~sp~~~~l~s~~~d~ 140 (343)
T 2xzm_R 82 LALSQENCFAISSSWDK-------------TLRLWDLRTG---TTYKRFVGH-QSE--VYSVAFSPDNRQILSAGAER 140 (343)
T ss_dssp EEECSSTTEEEEEETTS-------------EEEEEETTSS---CEEEEEECC-CSC--EEEEEECSSTTEEEEEETTS
T ss_pred EEECCCCCEEEEEcCCC-------------cEEEEECCCC---cEEEEEcCC-CCc--EEEEEECCCCCEEEEEcCCC
Confidence 35678999999988652 4568998775 32 222111 011 11244568999998888544
No 89
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=58.69 E-value=55 Score=27.71 Aligned_cols=56 Identities=9% Similarity=0.115 Sum_probs=30.6
Q ss_pred ceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCc-EEEeCC
Q 043381 69 EMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGK-ILVAGS 143 (286)
Q Consensus 69 ~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGr-Vlv~GG 143 (286)
...+-|||+.+++..... ....+||+.+. +....-+...+ .+ ..+-|||+ +|++..
T Consensus 235 ~~~~s~dg~~l~~~~~~~------------~~v~~~d~~~~---~~~~~~~~~~~---~~-~~~s~dg~~l~v~~~ 291 (353)
T 3vgz_A 235 NISLDTARQRAFITDSKA------------AEVLVVDTRNG---NILAKVAAPES---LA-VLFNPARNEAYVTHR 291 (353)
T ss_dssp EEEEETTTTEEEEEESSS------------SEEEEEETTTC---CEEEEEECSSC---CC-EEEETTTTEEEEEET
T ss_pred eEEECCCCCEEEEEeCCC------------CEEEEEECCCC---cEEEEEEcCCC---ce-EEECCCCCEEEEEEC
Confidence 456789998444433221 13468999876 44322222222 22 45568998 777654
No 90
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=58.25 E-value=57 Score=27.53 Aligned_cols=84 Identities=12% Similarity=0.174 Sum_probs=42.3
Q ss_pred CcEEEEEecCCCCCe-E-eecCCCCccccceEEeCCCc-EEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcC
Q 043381 42 QDCGRIEITNKSATW-Q-REMMPSPRVMGEMLLLPTGD-VLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELT 118 (286)
Q Consensus 42 ~s~~~id~~~~~~~W-~-~~~M~~~R~~~~~v~LpdG~-VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a 118 (286)
....++|+.. .+. + ...++....-.....-|||+ +|+.+.... ...+||+++. +.+.+.
T Consensus 198 ~~v~v~d~~~--~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~-------------~i~~~d~~~~---~~~~~~ 259 (331)
T 3u4y_A 198 NSIGILETQN--PENITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTV-------------DVFNFNQLSG---TLSFVK 259 (331)
T ss_dssp TEEEEEECSS--TTSCEEEEEEECSSCCCCEEECTTSSEEEEECSSEE-------------EEEEEETTTT---EEEEEE
T ss_pred CeEEEEECCC--CcccceeeeccCCCCCceEEECCCCCEEEEEEcCCC-------------EEEEEECCCC---ceeeec
Confidence 3466788753 232 1 11222333334567889999 666554221 2458999887 553221
Q ss_pred C---C--CCCCccce--eeEEcCCCcEE-EeCC
Q 043381 119 P---T--SKPRMCHS--TSVVLPDGKIL-VAGS 143 (286)
Q Consensus 119 ~---~--~~~R~yHS--~A~LLpDGrVl-v~GG 143 (286)
. . ..++..+. ...+-|||+.+ +++.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~ 292 (331)
T 3u4y_A 260 SFGHGLLIDPRPLFGANQMALNKTETKLFISAN 292 (331)
T ss_dssp EEECCCCCCCGGGTTCCCEEECTTSSEEEEEET
T ss_pred ccccccccCCCCcccccceEECCCCCEEEEecC
Confidence 1 1 11222111 13567899855 4443
No 91
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=58.17 E-value=57 Score=28.83 Aligned_cols=57 Identities=14% Similarity=0.243 Sum_probs=30.1
Q ss_pred EEeCCC-cEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCce-EEcCCCCCCCccceeeEEcC-CCcEEEeCCC
Q 043381 71 LLLPTG-DVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERF-SELTPTSKPRMCHSTSVVLP-DGKILVAGSN 144 (286)
Q Consensus 71 v~LpdG-~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~w-t~~a~~~~~R~yHS~A~LLp-DGrVlv~GG~ 144 (286)
...||| ++|+.++.+. +..+||..+. +- ..+....... ........| +++++++|+.
T Consensus 176 ~~~~~~~~~l~s~s~D~-------------~v~iwd~~~~---~~~~~~~~~~~~~-~~~~~~~~p~~~~~l~sg~~ 235 (344)
T 4gqb_B 176 AASPHKDSVFLSCSEDN-------------RILLWDTRCP---KPASQIGCSAPGY-LPTSLAWHPQQSEVFVFGDE 235 (344)
T ss_dssp EECSSCTTEEEEEETTS-------------CEEEEETTSS---SCEEECC----CC-CEEEEEECSSCTTEEEEEET
T ss_pred EecCCCCCceeeecccc-------------cccccccccc---ceeeeeecceeec-cceeeeecCCCCcceEEecc
Confidence 456787 5888887651 3468998765 32 2221111111 111223344 6789988874
No 92
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=57.54 E-value=43 Score=29.84 Aligned_cols=60 Identities=17% Similarity=0.293 Sum_probs=34.5
Q ss_pred eEEeC-CCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceE-EcCCCCCCCccc----eeeEEcCCCcEEEeCC
Q 043381 70 MLLLP-TGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFS-ELTPTSKPRMCH----STSVVLPDGKILVAGS 143 (286)
Q Consensus 70 ~v~Lp-dG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt-~~a~~~~~R~yH----S~A~LLpDGrVlv~GG 143 (286)
....| ||+.+++|+.+. ...+||..+. +.. .+.........| ......|||+.+++|+
T Consensus 212 ~~~~~~~~~~l~~~s~d~-------------~v~iwd~~~~---~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s 275 (393)
T 1erj_A 212 VAVSPGDGKYIAAGSLDR-------------AVRVWDSETG---FLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGS 275 (393)
T ss_dssp EEECSTTCCEEEEEETTS-------------CEEEEETTTC---CEEEEEC------CCCSSCEEEEEECTTSSEEEEEE
T ss_pred EEEECCCCCEEEEEcCCC-------------cEEEEECCCC---cEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEe
Confidence 34566 999999988652 3568998775 322 221111000112 2244568999999988
Q ss_pred CC
Q 043381 144 NP 145 (286)
Q Consensus 144 ~~ 145 (286)
..
T Consensus 276 ~d 277 (393)
T 1erj_A 276 LD 277 (393)
T ss_dssp TT
T ss_pred CC
Confidence 53
No 93
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=57.21 E-value=24 Score=34.24 Aligned_cols=59 Identities=10% Similarity=0.123 Sum_probs=35.8
Q ss_pred ceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceE-EcCCCCCCCccceeeEEcCCCcEEEeCCCCC
Q 043381 69 EMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFS-ELTPTSKPRMCHSTSVVLPDGKILVAGSNPH 146 (286)
Q Consensus 69 ~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt-~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~~ 146 (286)
+....|||+.+++|+.+. +..+||..+. +-. .+.. .... -. ....-|||+.+++|+.+.
T Consensus 435 ~v~~s~~g~~l~sgs~Dg-------------~v~vwd~~~~---~~~~~~~~-h~~~-v~-~~~~s~~~~~l~s~s~D~ 494 (694)
T 3dm0_A 435 DVVLSSDGQFALSGSWDG-------------ELRLWDLAAG---VSTRRFVG-HTKD-VL-SVAFSLDNRQIVSASRDR 494 (694)
T ss_dssp EEEECTTSSEEEEEETTS-------------EEEEEETTTT---EEEEEEEC-CSSC-EE-EEEECTTSSCEEEEETTS
T ss_pred EEEECCCCCEEEEEeCCC-------------cEEEEECCCC---cceeEEeC-CCCC-EE-EEEEeCCCCEEEEEeCCC
Confidence 446789999999998662 3568988765 322 1111 0011 11 234568999888888544
No 94
>3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A*
Probab=57.20 E-value=23 Score=32.65 Aligned_cols=87 Identities=13% Similarity=0.202 Sum_probs=47.0
Q ss_pred EEEEecCCCCCeEee-c-----CCCCc-----c-ccceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEE-ecCCCCCC
Q 043381 45 GRIEITNKSATWQRE-M-----MPSPR-----V-MGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVL-YEPNDPIN 111 (286)
Q Consensus 45 ~~id~~~~~~~W~~~-~-----M~~~R-----~-~~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~-YdP~t~~g 111 (286)
..+.-+|...+|+.. . ++.++ + +. .+++.||++++.-....+. +...-.+ .--.++ |
T Consensus 117 ~v~~S~D~G~TW~~~~~i~~~~~~~~~~g~~~v~eP-~~~~~~G~l~~~~~~~~~~--------~~~~~~~~~~~S~D-G 186 (355)
T 3a72_A 117 VLYASQDDGMTWDFVSHIAAGGEARPNNGLTPVWEP-FLLANKGKLICYYSDQRDN--------ATYGQTMVHQVTND-L 186 (355)
T ss_dssp EEEEESSTTSCCEEEEEEEEESCSSCCTTCCCEEEE-EEEEETTEEEEEEEECCCT--------TTCSCEEEEEEESS-S
T ss_pred EEEEECCCCccCccCccccccCccccccCCCccccc-eEEccCCeEEEEECCCCCC--------CCCCcEEEEEECCC-C
Confidence 344445667899864 3 22221 2 22 4678899998865432210 1111122 222344 7
Q ss_pred CceEEcCCC-----CCCCccceeeEEcCCCcEEEe
Q 043381 112 ERFSELTPT-----SKPRMCHSTSVVLPDGKILVA 141 (286)
Q Consensus 112 ~~wt~~a~~-----~~~R~yHS~A~LLpDGrVlv~ 141 (286)
++|+..... ...|.....++.|+||+++++
T Consensus 187 ~TWs~~~~~~~~~~~~~rpg~p~v~~l~dG~l~l~ 221 (355)
T 3a72_A 187 KNWGPVVEDVTYPTYTDRPGMPVVTKLPNGQYFYV 221 (355)
T ss_dssp SSCCCCEEEECCSSTTCEEEEEEEEECTTSCEEEE
T ss_pred CCCCCCeeccccCccCCCCCceEEEECCCCCEEEE
Confidence 799754432 123434456788999999877
No 95
>1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B
Probab=56.99 E-value=20 Score=33.03 Aligned_cols=76 Identities=12% Similarity=0.060 Sum_probs=42.9
Q ss_pred ccceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCCCC
Q 043381 67 MGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPH 146 (286)
Q Consensus 67 ~~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~~ 146 (286)
.|..++.-||+||..|-...|.-|.+.. .....|..-+.-.+...++..++. -.+|+ ++|..||+||.-|.+..
T Consensus 242 ~hs~alt~~G~v~~wG~n~~gqLG~~~~-~~~~~P~~v~~l~~~~~~v~~ia~----G~~hs-~al~~~G~v~~wG~n~~ 315 (413)
T 1a12_A 242 YFTFAISHEGHVYGFGLSNYHQLGTPGT-ESCFIPQNLTSFKNSTKSWVGFSG----GQHHT-VCMDSEGKAYSLGRAEY 315 (413)
T ss_dssp TEEEEEETTCCEEEEECCTTSTTSCSSC-SCEEEEEECGGGCCTTCCEEEEEE----CSSEE-EEEETTSCEEEEECCGG
T ss_pred CEEEEEeCCCCEEEEeCCCCcCCCCCCC-CcccccEEchhccCCCceEEEEec----ccceE-EEEeCCCCEEEeeCCCC
Confidence 4677888999999999876655444321 111222221111111123444432 23565 66678999999998765
Q ss_pred CC
Q 043381 147 SR 148 (286)
Q Consensus 147 ~~ 148 (286)
..
T Consensus 316 Gq 317 (413)
T 1a12_A 316 GR 317 (413)
T ss_dssp GT
T ss_pred Cc
Confidence 43
No 96
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=56.63 E-value=59 Score=27.33 Aligned_cols=98 Identities=9% Similarity=0.007 Sum_probs=52.1
Q ss_pred ccEEEEEcCCCCCCCcccCCCccccccCcEEEEEecCCCCCeEee-cCCCCccccceEEeCCCc-EEEEcCccCCCCCcc
Q 043381 15 RAEVLICGGAKPEAGMLAGKGEFMNALQDCGRIEITNKSATWQRE-MMPSPRVMGEMLLLPTGD-VLIINGAKKGTAGWN 92 (286)
Q Consensus 15 ~~~Vlv~GG~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~~~R~~~~~v~LpdG~-VlvvGG~~~g~ag~~ 92 (286)
+++.|++|+.+ ....++|+......-... .......-.+....|||+ .+++|+.+.
T Consensus 22 ~~~~l~~~~~d----------------~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg------ 79 (342)
T 1yfq_A 22 SKSLLLITSWD----------------GSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQG------ 79 (342)
T ss_dssp GGTEEEEEETT----------------SEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTS------
T ss_pred CCCEEEEEcCC----------------CeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCC------
Confidence 45667777654 245567776432111111 222233334456788999 888888651
Q ss_pred CCCCCCCccEEecC-CCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCCCC
Q 043381 93 FATDPNTTPVLYEP-NDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPH 146 (286)
Q Consensus 93 ~~~~~~~~~e~YdP-~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~~ 146 (286)
...+||. .+. +...+........-.+ ....| ++.+++|+...
T Consensus 80 -------~i~~wd~~~~~---~~~~~~~~~~~~~v~~-l~~~~-~~~l~s~~~d~ 122 (342)
T 1yfq_A 80 -------EILKVDLIGSP---SFQALTNNEANLGICR-ICKYG-DDKLIAASWDG 122 (342)
T ss_dssp -------CEEEECSSSSS---SEEECBSCCCCSCEEE-EEEET-TTEEEEEETTS
T ss_pred -------eEEEEEeccCC---ceEeccccCCCCceEE-EEeCC-CCEEEEEcCCC
Confidence 3468998 776 5554433111111122 33346 77777776543
No 97
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=55.33 E-value=14 Score=33.93 Aligned_cols=76 Identities=14% Similarity=0.170 Sum_probs=40.7
Q ss_pred ccceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCCCC
Q 043381 67 MGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPH 146 (286)
Q Consensus 67 ~~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~~ 146 (286)
.|..++..||+||..|-...|.-|.+. .+....|.......+..-+...++ .=.+|+ .+|..||+||.-|.+..
T Consensus 63 ~~~~~l~~~G~v~~wG~n~~GqLG~g~-~~~~~~p~~v~~~~~~~~~~v~i~----~G~~h~-~al~~~G~v~~wG~n~~ 136 (389)
T 3kci_A 63 QTLFAVTADGKLYATGYGAGGRLGIGG-TESVSTPTLLESIQHVFIKKVAVN----SGGKHC-LALSSEGEVYSWGEAED 136 (389)
T ss_dssp TEEEEEETTSCEEEEECCGGGTTSSSS-SCCEEEEEECGGGTTSCEEEEEEC----TTCSEE-EEEETTSCEEEEECCGG
T ss_pred CeEEEEcCCCcEEEEECCCCCCCCCCC-cCCccCCEEcccccCCceeEEEEC----cCCCeE-EEEcCCCCEEEEeCCCC
Confidence 456678899999999866555444331 112222333222222000111111 123675 55567999999998765
Q ss_pred CC
Q 043381 147 SR 148 (286)
Q Consensus 147 ~~ 148 (286)
..
T Consensus 137 Gq 138 (389)
T 3kci_A 137 GK 138 (389)
T ss_dssp GT
T ss_pred Cc
Confidence 43
No 98
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=55.04 E-value=24 Score=31.28 Aligned_cols=85 Identities=8% Similarity=0.077 Sum_probs=44.3
Q ss_pred cEEEEEecCCCCCeEeecCCCCccccceEEeCCCcEEEEcC-ccCCCCCccCCCCCCCccEEecCCCCCCCc--eEEcCC
Q 043381 43 DCGRIEITNKSATWQREMMPSPRVMGEMLLLPTGDVLIING-AKKGTAGWNFATDPNTTPVLYEPNDPINER--FSELTP 119 (286)
Q Consensus 43 s~~~id~~~~~~~W~~~~M~~~R~~~~~v~LpdG~VlvvGG-~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~--wt~~a~ 119 (286)
...++|+...........+.....-.....-|||+.+++.| .+ | ...+||..+. + ...+..
T Consensus 246 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~d-g------------~i~i~d~~~~---~~~~~~l~~ 309 (402)
T 2aq5_A 246 QVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGD-S------------SIRYFEITSE---APFLHYLSM 309 (402)
T ss_dssp EEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTC-S------------CEEEEEECSS---TTCEEEEEE
T ss_pred eEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCC-C------------eEEEEEecCC---CcceEeecc
Confidence 45567765422212222333333334456779999886544 33 1 3468888766 3 333322
Q ss_pred CCCCCccceeeEEcCCCcEEEeCCC
Q 043381 120 TSKPRMCHSTSVVLPDGKILVAGSN 144 (286)
Q Consensus 120 ~~~~R~yHS~A~LLpDGrVlv~GG~ 144 (286)
.... .........|||++++.++.
T Consensus 310 ~~~~-~~v~~~~~sp~~~~~~s~~~ 333 (402)
T 2aq5_A 310 FSSK-ESQRGMGYMPKRGLEVNKCE 333 (402)
T ss_dssp ECCS-SCCSEEEECCGGGSCGGGTE
T ss_pred cccC-CcccceEEecccccceecce
Confidence 2211 12223556789998877654
No 99
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=54.83 E-value=87 Score=25.64 Aligned_cols=58 Identities=12% Similarity=0.036 Sum_probs=32.4
Q ss_pred cceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCC
Q 043381 68 GEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGS 143 (286)
Q Consensus 68 ~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG 143 (286)
...+.-+||++|+...... ....||| +. ++...........-++ ..+.+||++|++..
T Consensus 102 ~~i~~~~~g~l~v~~~~~~-------------~i~~~d~-~g---~~~~~~~~~~~~~~~~-i~~~~~g~l~v~~~ 159 (299)
T 2z2n_A 102 YGITEGPNGDIWFTEMNGN-------------RIGRITD-DG---KIREYELPNKGSYPSF-ITLGSDNALWFTEN 159 (299)
T ss_dssp EEEEECTTSCEEEEETTTT-------------EEEEECT-TC---CEEEEECSSTTCCEEE-EEECTTSCEEEEET
T ss_pred eeeEECCCCCEEEEecCCc-------------eEEEECC-CC---CEEEecCCCCCCCCce-EEEcCCCCEEEEeC
Confidence 3445668999999754221 2357888 44 4443221111122233 34468999999864
No 100
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=54.55 E-value=52 Score=28.63 Aligned_cols=63 Identities=8% Similarity=0.081 Sum_probs=36.4
Q ss_pred cceEEeCC-CcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCC----CccceeeEEcCCC-cEEEe
Q 043381 68 GEMLLLPT-GDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKP----RMCHSTSVVLPDG-KILVA 141 (286)
Q Consensus 68 ~~~v~Lpd-G~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~----R~yHS~A~LLpDG-rVlv~ 141 (286)
.+....|| ++++++++.+. ...+||..+. +....-..... ...-......||| +++++
T Consensus 169 ~~~~~~~~~~~~l~~~~~dg-------------~v~iwd~~~~---~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 232 (416)
T 2pm9_A 169 ISLAWNQSLAHVFASAGSSN-------------FASIWDLKAK---KEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVAT 232 (416)
T ss_dssp CEEEECSSCTTEEEEESSSS-------------CEEEEETTTT---EEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEE
T ss_pred eEEEeCCCCCcEEEEEcCCC-------------CEEEEECCCC---CcceEEeccccccccCCceEEEEECCCCCCEEEE
Confidence 34567788 78999988651 3468998776 43322111110 1222235567887 68888
Q ss_pred CCCCC
Q 043381 142 GSNPH 146 (286)
Q Consensus 142 GG~~~ 146 (286)
|+...
T Consensus 233 ~~~d~ 237 (416)
T 2pm9_A 233 ATGSD 237 (416)
T ss_dssp EECCS
T ss_pred EECCC
Confidence 77543
No 101
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=54.01 E-value=68 Score=28.34 Aligned_cols=59 Identities=7% Similarity=0.153 Sum_probs=34.1
Q ss_pred ceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceE-EcCCCCCCCccceeeEEcCCC-cEEEeCCCCC
Q 043381 69 EMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFS-ELTPTSKPRMCHSTSVVLPDG-KILVAGSNPH 146 (286)
Q Consensus 69 ~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt-~~a~~~~~R~yHS~A~LLpDG-rVlv~GG~~~ 146 (286)
+....|||+.+++|+.+. +..+||..+. +-. .+... .... .....-+|+ ++|++|+.+.
T Consensus 132 ~v~~spdg~~l~sgs~d~-------------~i~iwd~~~~---~~~~~~~~h-~~~V--~~~~~~~~~~~~l~s~s~D~ 192 (344)
T 4gqb_B 132 TVSVLSSGTQAVSGSKDI-------------CIKVWDLAQQ---VVLSSYRAH-AAQV--TCVAASPHKDSVFLSCSEDN 192 (344)
T ss_dssp EEEECTTSSEEEEEETTS-------------CEEEEETTTT---EEEEEECCC-SSCE--EEEEECSSCTTEEEEEETTS
T ss_pred EEEECCCCCEEEEEeCCC-------------eEEEEECCCC---cEEEEEcCc-CCce--EEEEecCCCCCceeeecccc
Confidence 345689999999998662 3568998776 322 22111 1111 122334676 5888887543
No 102
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=53.96 E-value=33 Score=30.51 Aligned_cols=59 Identities=14% Similarity=0.278 Sum_probs=35.5
Q ss_pred cceEEeCCCcEEEE--cCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCC--CCCCccceeeEEcCCCcEEEeCC
Q 043381 68 GEMLLLPTGDVLII--NGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPT--SKPRMCHSTSVVLPDGKILVAGS 143 (286)
Q Consensus 68 ~~~v~LpdG~Vlvv--GG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~--~~~R~yHS~A~LLpDGrVlv~GG 143 (286)
.+....|||+.+++ |..+ | ...+||-.+. ++.....+ ...+.. ...+-|||+.+++|+
T Consensus 307 ~~~~~s~~~~~l~~~~g~~d-g------------~i~v~~~~~~---~~~~~~~~~~h~~~v~--~~~~s~dg~~l~s~~ 368 (401)
T 4aez_A 307 TSLIWSPHSKEIMSTHGFPD-N------------NLSIWSYSSS---GLTKQVDIPAHDTRVL--YSALSPDGRILSTAA 368 (401)
T ss_dssp EEEEECSSSSEEEEEECTTT-C------------EEEEEEEETT---EEEEEEEEECCSSCCC--EEEECTTSSEEEEEC
T ss_pred EEEEECCCCCeEEEEeecCC-C------------cEEEEecCCc---cceeEEEecCCCCCEE--EEEECCCCCEEEEEe
Confidence 34466789998888 4333 1 3468887765 44433221 112222 245678999999988
Q ss_pred C
Q 043381 144 N 144 (286)
Q Consensus 144 ~ 144 (286)
.
T Consensus 369 ~ 369 (401)
T 4aez_A 369 S 369 (401)
T ss_dssp T
T ss_pred C
Confidence 5
No 103
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=53.23 E-value=20 Score=33.00 Aligned_cols=73 Identities=18% Similarity=0.203 Sum_probs=42.9
Q ss_pred ccceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEe-cCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCCC
Q 043381 67 MGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLY-EPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNP 145 (286)
Q Consensus 67 ~~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~Y-dP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~ 145 (286)
.|.+++.-||+||..|-...|.-|.+.. .....|..- -|... +...++. -.+|+ ++|..||+||.-|-+.
T Consensus 287 ~hs~alt~~G~v~~wG~n~~GqLG~g~~-~~~~~p~~v~~~~~~---~v~~va~----G~~hs-~alt~~G~v~~wG~n~ 357 (406)
T 4d9s_A 287 RHTMALTSDGKLYGWGWNKFGQVGVGNN-LDQCSPVQVRFPDDQ---KVVQVSC----GWRHT-LAVTERNNVFAWGRGT 357 (406)
T ss_dssp SEEEEEETTSCEEEEECCTTSTTCSSSS-SCEEEEEEECCGGGC---CEEEEEE----CSSEE-EEEETTSCEEEEECCT
T ss_pred CEEEEEcCCCeEEEeeCCCCCCCCCCCC-CCCccCEEEeccCCC---cEEEEEe----CCCeE-EEEeCCCCEEEecCCC
Confidence 5777888999999999766555443321 111122211 12222 4444322 23675 5556899999999887
Q ss_pred CCC
Q 043381 146 HSR 148 (286)
Q Consensus 146 ~~~ 148 (286)
+..
T Consensus 358 ~Gq 360 (406)
T 4d9s_A 358 NGQ 360 (406)
T ss_dssp TST
T ss_pred CCc
Confidence 764
No 104
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=52.82 E-value=35 Score=29.43 Aligned_cols=60 Identities=13% Similarity=0.184 Sum_probs=36.6
Q ss_pred ceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCCCC
Q 043381 69 EMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPH 146 (286)
Q Consensus 69 ~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~~ 146 (286)
+....|||+.+++|+.+. +..+||..+. +....+.... . .-.....-||++.++.|+.+.
T Consensus 70 ~~~~s~dg~~l~s~s~D~-------------~v~~wd~~~~--~~~~~~~~h~-~--~v~~~~~~~~~~~l~s~s~D~ 129 (319)
T 3frx_A 70 DCTLTADGAYALSASWDK-------------TLRLWDVATG--ETYQRFVGHK-S--DVMSVDIDKKASMIISGSRDK 129 (319)
T ss_dssp EEEECTTSSEEEEEETTS-------------EEEEEETTTT--EEEEEEECCS-S--CEEEEEECTTSCEEEEEETTS
T ss_pred EEEECCCCCEEEEEeCCC-------------EEEEEECCCC--CeeEEEccCC-C--cEEEEEEcCCCCEEEEEeCCC
Confidence 345679999999998762 4568998776 1222221110 0 111234568999999988654
No 105
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=52.38 E-value=21 Score=32.94 Aligned_cols=74 Identities=19% Similarity=0.195 Sum_probs=41.2
Q ss_pred ccceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCCCC
Q 043381 67 MGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPH 146 (286)
Q Consensus 67 ~~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~~ 146 (286)
.|..++.-||+||..|-...|.-|.+.. .....|..-+--. +.+...++. -.+|+ ++|..||+||.-|.+..
T Consensus 235 ~ht~~l~~~G~v~~wG~n~~GqlG~g~~-~~~~~p~~v~~~~--~~~v~~i~~----G~~hs-~alt~~G~v~~wG~n~~ 306 (406)
T 4d9s_A 235 RHTISVSYSGALYTYGWSKYGQLGHGDL-EDHLIPHKLEALS--NSFISQISG----GWRHT-MALTSDGKLYGWGWNKF 306 (406)
T ss_dssp SEEEEEETTCCEEEEECCTTSTTCSSSC-CCEEEEEECGGGT--TSCEEEEEE----CSSEE-EEEETTSCEEEEECCTT
T ss_pred CcEEEEcCCCCEEEeeCCCCCCCCCCCC-cCccccEEecccC--CCCEEEEEe----cCCEE-EEEcCCCeEEEeeCCCC
Confidence 5677888999999999766554443311 1111121111100 112333221 12564 66678999999998876
Q ss_pred CC
Q 043381 147 SR 148 (286)
Q Consensus 147 ~~ 148 (286)
..
T Consensus 307 Gq 308 (406)
T 4d9s_A 307 GQ 308 (406)
T ss_dssp ST
T ss_pred CC
Confidence 54
No 106
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=51.47 E-value=64 Score=27.88 Aligned_cols=66 Identities=18% Similarity=0.211 Sum_probs=36.7
Q ss_pred cceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCC------C----CCccceeeEEcCCCc
Q 043381 68 GEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTS------K----PRMCHSTSVVLPDGK 137 (286)
Q Consensus 68 ~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~------~----~R~yHS~A~LLpDGr 137 (286)
.+....|||+.+++++.+.+ + -...+||..+. +.-..+.... + -...-....+-|||+
T Consensus 237 ~~i~~~~~~~~l~~~~~d~~---~-------g~i~i~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 304 (397)
T 1sq9_A 237 RSVKFSPQGSLLAIAHDSNS---F-------GCITLYETEFG--ERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGE 304 (397)
T ss_dssp EEEEECSSTTEEEEEEEETT---E-------EEEEEEETTTC--CEEEEECBC--------CCBSBSSCEEEEEECSSSS
T ss_pred ceEEECCCCCEEEEEecCCC---C-------ceEEEEECCCC--cccceeccCcccccccccccccCCcEEEEEECCCCC
Confidence 34567899999999886510 0 13468887765 1122221100 0 111222345568999
Q ss_pred EEEeCCCC
Q 043381 138 ILVAGSNP 145 (286)
Q Consensus 138 Vlv~GG~~ 145 (286)
.|++|+..
T Consensus 305 ~l~~~~~d 312 (397)
T 1sq9_A 305 TLCSAGWD 312 (397)
T ss_dssp EEEEEETT
T ss_pred EEEEEeCC
Confidence 99998853
No 107
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=50.74 E-value=51 Score=29.19 Aligned_cols=61 Identities=11% Similarity=0.081 Sum_probs=34.3
Q ss_pred ceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCCCC
Q 043381 69 EMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPH 146 (286)
Q Consensus 69 ~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~~ 146 (286)
+...-|||+.+++++.+ ...+|+-.+. +.............-......|||+.+++++...
T Consensus 181 ~v~fspdg~~l~s~s~~--------------~~~~~~~~~~---~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~ 241 (365)
T 4h5i_A 181 DLHFSTDGKVVAYITGS--------------SLEVISTVTG---SCIARKTDFDKNWSLSKINFIADDTVLIAASLKK 241 (365)
T ss_dssp EEEECTTSSEEEEECSS--------------CEEEEETTTC---CEEEEECCCCTTEEEEEEEEEETTEEEEEEEESS
T ss_pred EEEEccCCceEEeccce--------------eEEEEEeccC---cceeeeecCCCCCCEEEEEEcCCCCEEEEEecCC
Confidence 34567999999987743 2356665555 3322111111111112344579999999987544
No 108
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=50.51 E-value=28 Score=32.03 Aligned_cols=68 Identities=24% Similarity=0.426 Sum_probs=40.7
Q ss_pred ccceEEeCCCcEEEEcCccCCCCCccCCCC-CCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCC
Q 043381 67 MGEMLLLPTGDVLIINGAKKGTAGWNFATD-PNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGS 143 (286)
Q Consensus 67 ~~~~v~LpdG~VlvvGG~~~g~ag~~~~~~-~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG 143 (286)
.|..++.-||+||..|-...|.-|.+...+ ....|..-+- ..++..++. -.+|+ ++|..||+||.-|.
T Consensus 85 ~h~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v~~----~~~i~~va~----G~~hs-~al~~~G~v~~wG~ 153 (423)
T 3mvd_K 85 MHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLIDL----PGKALCISA----GDSHS-ACLLEDGRVFAWGS 153 (423)
T ss_dssp SEEEEEETTSCEEEEECCSSSTTCSCCCSTTSSSSCEECCC----SSCEEEEEE----CSSEE-EEEETTSCEEEEEC
T ss_pred CeEEEEeCCCeEEEeECCCCcCCCCCCcCCccccCCeEEcC----CCCEEEEEc----CcCeE-EEEeCCCeEEEEeC
Confidence 477788899999999976655544432111 1233433321 114444322 12675 55678999999997
No 109
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=50.41 E-value=51 Score=27.67 Aligned_cols=17 Identities=29% Similarity=0.354 Sum_probs=12.8
Q ss_pred eEEcCCCcEEEeCCCCC
Q 043381 130 SVVLPDGKILVAGSNPH 146 (286)
Q Consensus 130 A~LLpDGrVlv~GG~~~ 146 (286)
...-|||+.|++||.+.
T Consensus 312 l~~s~dg~~l~sgs~Dg 328 (340)
T 4aow_A 312 LAWSADGQTLFAGYTDN 328 (340)
T ss_dssp EEECTTSSEEEEEETTS
T ss_pred EEECCCCCEEEEEeCCC
Confidence 34568999999998643
No 110
>2vov_A MOPE, surface-associated protein; metal-binding protein, oxidized tryptophan, methanotroph bacterium, kunurenine, copper binding; HET: KYN; 1.35A {Methylococcus capsulatus} PDB: 2vox_A* 2vow_A
Probab=49.41 E-value=22 Score=30.92 Aligned_cols=33 Identities=45% Similarity=0.967 Sum_probs=24.9
Q ss_pred ceEEEEEEcCCCCCcCCCcceEEEEEc-----------C----------CCCCccEEEEe
Q 043381 247 GIFQVSVTAPPTAKIAPPSFYLLFVVY-----------R----------QVPSPGTWVQI 285 (286)
Q Consensus 247 ~~~~~~v~~P~~~~vappG~YmLFv~~-----------~----------GvPS~a~~V~i 285 (286)
|..+-.+++|.. |||||+|-+ + -||..|-||.|
T Consensus 278 gaftksitlpkt------gyymlyvanvlevddwsvdadgkltttgevwevpakgcwvni 331 (336)
T 2vov_A 278 GAFTKSITLPKT------GYYMLYVANVLEVDDWSVDADGKLTTTGEVWEVPAKGCWVNI 331 (336)
T ss_dssp TEEEEEEECSSS------EEEEEEEEECCEESEEEECTTCCEEEESCCCCSSSSEEEEEE
T ss_pred ceeeeeeeccCc------ceEEEEEeeeEEeccceeccCCceeecceEEeccCCceEEEE
Confidence 356667778754 999999864 1 28999999986
No 111
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=49.39 E-value=2e+02 Score=28.30 Aligned_cols=56 Identities=16% Similarity=0.306 Sum_probs=34.5
Q ss_pred EEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCC---CCCCCccceeeEEcCCCcEEEeCCC
Q 043381 71 LLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTP---TSKPRMCHSTSVVLPDGKILVAGSN 144 (286)
Q Consensus 71 v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~---~~~~R~yHS~A~LLpDGrVlv~GG~ 144 (286)
+.-.+|++|+... .| -.+|||++. +++.... +......-..++..+||+++++|.+
T Consensus 592 ~~d~~g~lWi~t~--~G-------------l~~~~~~~~---~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~g~~~ 650 (795)
T 4a2l_A 592 LEDSFGRLWLSTN--RG-------------ISCFNPETE---KFRNFTESDGLQSNQFNTASYCRTSVGQMYFGGIN 650 (795)
T ss_dssp EECTTSCEEEEET--TE-------------EEEEETTTT---EEEEECGGGTCSCSCEEEEEEEECTTSCEEEEETT
T ss_pred EECCCCCEEEEcC--Cc-------------eEEEcCCCC---cEEEcCCcCCCccccCccCceeECCCCeEEEecCC
Confidence 3445788887653 22 247999988 7775432 2222222235667789999998864
No 112
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=49.38 E-value=68 Score=31.11 Aligned_cols=84 Identities=13% Similarity=0.118 Sum_probs=46.2
Q ss_pred cEEEEEecCCCCCeEeecCCCCccccceEEeC--CCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCce-EEcCC
Q 043381 43 DCGRIEITNKSATWQREMMPSPRVMGEMLLLP--TGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERF-SELTP 119 (286)
Q Consensus 43 s~~~id~~~~~~~W~~~~M~~~R~~~~~v~Lp--dG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~w-t~~a~ 119 (286)
+..++|+......+.... ...+........| ||+.+++|+.+. ...+||..+. +- ..+..
T Consensus 164 ~v~vwd~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~~~~~dg-------------~i~~~d~~~~---~~~~~~~~ 226 (814)
T 3mkq_A 164 TVKVWSLGQSTPNFTLTT-GQERGVNYVDYYPLPDKPYMITASDDL-------------TIKIWDYQTK---SCVATLEG 226 (814)
T ss_dssp EEEEEETTCSSCSEEEEC-CCTTCCCEEEECCSTTCCEEEEECTTS-------------EEEEEETTTT---EEEEEEEC
T ss_pred eEEEEECCCCcceeEEec-CCCCCEEEEEEEECCCCCEEEEEeCCC-------------EEEEEECCCC---cEEEEEcC
Confidence 455677654444444331 1112223334556 999999988651 3568887765 32 22211
Q ss_pred CCCCCccceeeEEcCCCcEEEeCCCCC
Q 043381 120 TSKPRMCHSTSVVLPDGKILVAGSNPH 146 (286)
Q Consensus 120 ~~~~R~yHS~A~LLpDGrVlv~GG~~~ 146 (286)
....-.....-|||+++++|+...
T Consensus 227 ---~~~~v~~~~~~~~~~~l~~~~~dg 250 (814)
T 3mkq_A 227 ---HMSNVSFAVFHPTLPIIISGSEDG 250 (814)
T ss_dssp ---CSSCEEEEEECSSSSEEEEEETTS
T ss_pred ---CCCCEEEEEEcCCCCEEEEEeCCC
Confidence 111223455679999999888543
No 113
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=49.31 E-value=1e+02 Score=24.94 Aligned_cols=57 Identities=16% Similarity=0.120 Sum_probs=33.1
Q ss_pred ceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCC
Q 043381 69 EMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGS 143 (286)
Q Consensus 69 ~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG 143 (286)
+.++-+||++|+...... ....||+... .......... ..-++ -.+-+||++|++..
T Consensus 154 ~i~~~~~g~l~v~~~~~~-------------~i~~~~~~~~---~~~~~~~~~~-~~p~~-i~~d~~g~l~v~~~ 210 (270)
T 1rwi_B 154 GVAVDNSGNVYVTDTDNN-------------RVVKLEAESN---NQVVLPFTDI-TAPWG-IAVDEAGTVYVTEH 210 (270)
T ss_dssp CEEECTTCCEEEEEGGGT-------------EEEEECTTTC---CEEECCCSSC-CSEEE-EEECTTCCEEEEET
T ss_pred eEEEeCCCCEEEEECCCC-------------EEEEEecCCC---ceEeecccCC-CCceE-EEECCCCCEEEEEC
Confidence 445668999998765321 2458888776 4433221111 11222 34467899999875
No 114
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=49.20 E-value=46 Score=28.96 Aligned_cols=88 Identities=9% Similarity=0.072 Sum_probs=45.1
Q ss_pred CcEEEEEecCCCCCeEee-cCCCCccccceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCC-C-CceEEcC
Q 043381 42 QDCGRIEITNKSATWQRE-MMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPI-N-ERFSELT 118 (286)
Q Consensus 42 ~s~~~id~~~~~~~W~~~-~M~~~R~~~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~-g-~~wt~~a 118 (286)
....++|+.... ..... .+.....-.+...-|||+.+++|+.+. ...+||..+.. + +....+.
T Consensus 45 ~~v~iw~~~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg-------------~v~vw~~~~~~~~~~~~~~~~ 110 (416)
T 2pm9_A 45 SSLELWSLLAAD-SEKPIASLQVDSKFNDLDWSHNNKIIAGALDNG-------------SLELYSTNEANNAINSMARFS 110 (416)
T ss_dssp CCCEEEESSSGG-GCSCSCCCCCSSCEEEEEECSSSSCEEEEESSS-------------CEEEECCSSTTSCCCEEEECC
T ss_pred CeEEEEEccCCC-CCcEEEEEecCCceEEEEECCCCCeEEEEccCC-------------eEEEeecccccccccchhhcc
Confidence 355677775321 11111 222222233445679999999987651 34688887621 1 1222222
Q ss_pred CCCCCCccceeeEEcCC-CcEEEeCCCCC
Q 043381 119 PTSKPRMCHSTSVVLPD-GKILVAGSNPH 146 (286)
Q Consensus 119 ~~~~~R~yHS~A~LLpD-GrVlv~GG~~~ 146 (286)
... ..-......|| ++++++|+...
T Consensus 111 ~h~---~~v~~~~~~~~~~~~l~s~~~dg 136 (416)
T 2pm9_A 111 NHS---SSVKTVKFNAKQDNVLASGGNNG 136 (416)
T ss_dssp CSS---SCCCEEEECSSSTTBEEEECSSS
T ss_pred CCc---cceEEEEEcCCCCCEEEEEcCCC
Confidence 111 11122445677 88888888544
No 115
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=48.95 E-value=52 Score=30.38 Aligned_cols=57 Identities=23% Similarity=0.318 Sum_probs=34.2
Q ss_pred eEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCCC
Q 043381 70 MLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNP 145 (286)
Q Consensus 70 ~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~ 145 (286)
....|||+.|++++.+. ...+||-... ....+.... .+ -......|||+.|++||.+
T Consensus 514 l~~s~dg~~l~s~~~dg-------------~v~lwd~~~~---~~~~~~~h~-~~--v~~~~fs~dg~~l~s~~~D 570 (577)
T 2ymu_A 514 VAFSPDGQTIASASDDK-------------TVKLWNRNGQ---LLQTLTGHS-SS--VWGVAFSPDGQTIASASSD 570 (577)
T ss_dssp EEECTTSSCEEEEETTS-------------EEEEECTTSC---EEEEEECCS-SC--EEEEEECTTSSCEEEEETT
T ss_pred EEEcCCCCEEEEEECcC-------------EEEEEeCCCC---EEEEEcCCC-CC--EEEEEEcCCCCEEEEEeCC
Confidence 35679999999988651 3468884322 444332110 11 1124467999999988753
No 116
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=48.04 E-value=89 Score=27.69 Aligned_cols=51 Identities=8% Similarity=0.093 Sum_probs=33.7
Q ss_pred cEEEEEecCCCCCeEee-cCCCCccccceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCC
Q 043381 43 DCGRIEITNKSATWQRE-MMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDP 109 (286)
Q Consensus 43 s~~~id~~~~~~~W~~~-~M~~~R~~~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~ 109 (286)
+..+||+.. .+-... +++ ++.++.++.+-+++||++..... ...+||+++-
T Consensus 66 ~v~~vD~~T--gkv~~~~~l~-~~~FgeGit~~g~~ly~ltw~~~-------------~v~v~D~~t~ 117 (262)
T 3nol_A 66 SIRKVDIES--GKTLQQIELG-KRYFGEGISDWKDKIVGLTWKNG-------------LGFVWNIRNL 117 (262)
T ss_dssp EEEEECTTT--CCEEEEEECC-TTCCEEEEEEETTEEEEEESSSS-------------EEEEEETTTC
T ss_pred eEEEEECCC--CcEEEEEecC-CccceeEEEEeCCEEEEEEeeCC-------------EEEEEECccC
Confidence 455777753 444444 664 47777667776889999866431 3569999876
No 117
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=47.85 E-value=22 Score=30.18 Aligned_cols=18 Identities=17% Similarity=0.359 Sum_probs=13.3
Q ss_pred cceEEeCCCc-EEEEcCcc
Q 043381 68 GEMLLLPTGD-VLIINGAK 85 (286)
Q Consensus 68 ~~~v~LpdG~-VlvvGG~~ 85 (286)
.+....|||+ ++++|+.+
T Consensus 263 ~~~~~~~~~~~~l~~~~~d 281 (357)
T 3i2n_A 263 WQVRHLPQNRELFLTAGGA 281 (357)
T ss_dssp EEEEEETTEEEEEEEEETT
T ss_pred EEEEECCCCCcEEEEEeCC
Confidence 3446779998 88888765
No 118
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=47.66 E-value=24 Score=32.20 Aligned_cols=74 Identities=15% Similarity=0.152 Sum_probs=42.9
Q ss_pred ccceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCCCC
Q 043381 67 MGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPH 146 (286)
Q Consensus 67 ~~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~~ 146 (286)
.|..++.-||+||..|-...|.-|.+. .+....|..-..- .+.+...++. -.+|+ ++|..||+||.-|.+..
T Consensus 275 ~hs~alt~~G~v~~wG~n~~GqLG~g~-~~~~~~P~~v~~l--~~~~v~~ia~----G~~h~-~al~~~G~v~~wG~n~~ 346 (389)
T 3kci_A 275 QFSVALTKSGAVYTWGKGDYHRLGHGS-DDHVRRPRQVQGL--QGKKVIAIAT----GSLHC-VCCTEDGEVYTWGDNDE 346 (389)
T ss_dssp TEEEEEETTSCEEEEECCGGGTTCSSS-CCCEEEEEECGGG--TTCCEEEEEE----CSSEE-EEEETTCCEEEEECCTT
T ss_pred CEEEEEeCCCeEEEEeCCCCCCCCCCC-CccccCCeEeccC--CCCCEEEEEe----ccCeE-EEECCCCCEEEeeCCCC
Confidence 567788899999999976655444332 1111122211110 1123443322 23676 55578999999999876
Q ss_pred CC
Q 043381 147 SR 148 (286)
Q Consensus 147 ~~ 148 (286)
..
T Consensus 347 Gq 348 (389)
T 3kci_A 347 GQ 348 (389)
T ss_dssp ST
T ss_pred Cc
Confidence 54
No 119
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=47.47 E-value=1.3e+02 Score=25.61 Aligned_cols=63 Identities=14% Similarity=0.102 Sum_probs=34.4
Q ss_pred ceEEeCCCc-EEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcC------------CCCCCCccceeeEEcCC
Q 043381 69 EMLLLPTGD-VLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELT------------PTSKPRMCHSTSVVLPD 135 (286)
Q Consensus 69 ~~v~LpdG~-VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a------------~~~~~R~yHS~A~LLpD 135 (286)
+....|+|+ ++++|+.+. ...+||..+.... ...+. ........-......||
T Consensus 191 ~~~~~~~~~~ll~~~~~dg-------------~i~i~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 256 (408)
T 4a11_B 191 AVSWSPRYDYILATASADS-------------RVKLWDVRRASGC-LITLDQHNGKKSQAVESANTAHNGKVNGLCFTSD 256 (408)
T ss_dssp EEEECSSCTTEEEEEETTS-------------CEEEEETTCSSCC-SEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTT
T ss_pred EEEECCCCCcEEEEEcCCC-------------cEEEEECCCCCcc-cccccccccccceeeccccccccCceeEEEEcCC
Confidence 446788998 788887651 2457777654211 11110 00111112223456789
Q ss_pred CcEEEeCCCC
Q 043381 136 GKILVAGSNP 145 (286)
Q Consensus 136 GrVlv~GG~~ 145 (286)
|+.+++|+..
T Consensus 257 ~~~l~~~~~d 266 (408)
T 4a11_B 257 GLHLLTVGTD 266 (408)
T ss_dssp SSEEEEEETT
T ss_pred CCEEEEecCC
Confidence 9999988753
No 120
>3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A*
Probab=47.17 E-value=16 Score=33.73 Aligned_cols=68 Identities=22% Similarity=0.302 Sum_probs=40.3
Q ss_pred cceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCC-----CCccceeeEEcC-------C
Q 043381 68 GEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSK-----PRMCHSTSVVLP-------D 135 (286)
Q Consensus 68 ~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~-----~R~yHS~A~LLp-------D 135 (286)
...+.|+||++|+.-=..... .......+|- .++.|++|+.+....- .-.+|-+...+| +
T Consensus 26 p~~v~L~dG~lLa~~~~~~~~-------~~~~~~~v~r-S~DgG~TW~~~~~v~~~~~g~~~~~~P~l~~lp~~v~~~~~ 97 (355)
T 3a72_A 26 PRNEQLPNGDLLATWENYSPE-------PPAVYFPIYR-SKDHGKTWNEISRVHDTVNGYGLRYQPFLYSLPERVGSFKK 97 (355)
T ss_dssp EEEEECTTSCEEEEEEECCCS-------SSCCCEEEEE-ESSTTSCCEEEEEECCTTTSSCEEEEEEEEECSSCBTTBCT
T ss_pred ceEEEcCCCCEEEEEEeecCC-------CCCceEEEEE-EcCCCcCcCCCcccCCCcCCcccccCCcEEecCcccccCCC
Confidence 567899999999752111000 0111224565 3567889998643221 222466677777 9
Q ss_pred CcEEEeCC
Q 043381 136 GKILVAGS 143 (286)
Q Consensus 136 GrVlv~GG 143 (286)
|+|+.+|.
T Consensus 98 G~ll~~~~ 105 (355)
T 3a72_A 98 GTLLLAGS 105 (355)
T ss_dssp TCEEEEEE
T ss_pred CcEEEEEe
Confidence 99999953
No 121
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=47.06 E-value=54 Score=28.92 Aligned_cols=76 Identities=11% Similarity=-0.004 Sum_probs=42.5
Q ss_pred CCeEee-cCCCCccccceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCC---CCcccee
Q 043381 54 ATWQRE-MMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSK---PRMCHST 129 (286)
Q Consensus 54 ~~W~~~-~M~~~R~~~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~---~R~yHS~ 129 (286)
.+++.. .++....-.+...-|+++++++++.+. ...+||+.+. +.....+... ....-..
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~-------------~i~~~d~~~g---~~~~~~~~~~~~~~~~~v~~ 174 (433)
T 3bws_A 111 ITHRFISRFKTGFQPKSVRFIDNTRLAIPLLEDE-------------GMDVLDINSG---QTVRLSPPEKYKKKLGFVET 174 (433)
T ss_dssp CSEEEEEEEECSSCBCCCEESSSSEEEEEBTTSS-------------SEEEEETTTC---CEEEECCCHHHHTTCCEEEE
T ss_pred CcceEEEEEcCCCCceEEEEeCCCeEEEEeCCCC-------------eEEEEECCCC---eEeeecCcccccccCCceeE
Confidence 344443 333333333556778899999887541 3569998877 5543222111 1111112
Q ss_pred eEEcCCCcEEEeCCCC
Q 043381 130 SVVLPDGKILVAGSNP 145 (286)
Q Consensus 130 A~LLpDGrVlv~GG~~ 145 (286)
...-+||++|++|+..
T Consensus 175 ~~~~~~~~~~~s~~~d 190 (433)
T 3bws_A 175 ISIPEHNELWVSQMQA 190 (433)
T ss_dssp EEEGGGTEEEEEEGGG
T ss_pred EEEcCCCEEEEEECCC
Confidence 3447899999998743
No 122
>4fj6_A Glycoside hydrolase family 33, candidate sialidas; bacterial neuraminidase repeat; HET: MSE GOL; 1.90A {Parabacteroides distasonis}
Probab=47.02 E-value=47 Score=32.35 Aligned_cols=87 Identities=8% Similarity=0.140 Sum_probs=50.5
Q ss_pred EEEEecCCCCCeEee-cCCCC------c----cccceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCc
Q 043381 45 GRIEITNKSATWQRE-MMPSP------R----VMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINER 113 (286)
Q Consensus 45 ~~id~~~~~~~W~~~-~M~~~------R----~~~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~ 113 (286)
..+.-.|...+|... .++.. + .-+..+.|.||++++---... ..| ......+|. .+.|++
T Consensus 294 ~~~~S~D~G~TWs~p~~l~~~~~~~~~~~~~~g~G~GI~l~dGrLv~P~~~~~-~~g------~~~s~i~~S--~D~G~T 364 (523)
T 4fj6_A 294 MLVKSEDDGKTWSEPINITSQVKDPSWYFLLQGPGRGITMQDGTLVFPIQFID-ATR------VPNAGIMYS--KDRGKT 364 (523)
T ss_dssp EEEEESSTTSSCCCCEECHHHHCCTTCSEEEECSEECEECTTSCEEEEEEEEC-TTS------CEEEEEEEE--SSTTSS
T ss_pred EEEEcCCCCccCCCCeeecccccCCcceEEecCCCcceEEeCCeEEEEEEEEc-CCC------CEEEEEEEE--CCCCCe
Confidence 344445667899863 33211 1 123458999999886532221 001 112334664 345679
Q ss_pred eEEcCCCCCCCccceeeEEcCCCcEEEe
Q 043381 114 FSELTPTSKPRMCHSTSVVLPDGKILVA 141 (286)
Q Consensus 114 wt~~a~~~~~R~yHS~A~LLpDGrVlv~ 141 (286)
|+....+... ..+...+.++||++++.
T Consensus 365 W~~~~~~~~~-~~e~~vve~~dG~L~~~ 391 (523)
T 4fj6_A 365 WHLHNLARTN-TTEAQVAEVEPGVLMLN 391 (523)
T ss_dssp CEECCCSEET-EEEEEEEEEETTEEEEE
T ss_pred EEECCCCCcc-ccCCEEEEecCCEEEEE
Confidence 9987666433 55667777899999983
No 123
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=46.49 E-value=1.4e+02 Score=25.61 Aligned_cols=16 Identities=19% Similarity=0.422 Sum_probs=13.0
Q ss_pred eEEeCCCcEEEEcCcc
Q 043381 70 MLLLPTGDVLIINGAK 85 (286)
Q Consensus 70 ~v~LpdG~VlvvGG~~ 85 (286)
...-|||+.++++|.+
T Consensus 124 v~~sp~~~~l~s~~~d 139 (343)
T 2xzm_R 124 VAFSPDNRQILSAGAE 139 (343)
T ss_dssp EEECSSTTEEEEEETT
T ss_pred EEECCCCCEEEEEcCC
Confidence 4567999999999876
No 124
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=45.95 E-value=62 Score=27.90 Aligned_cols=58 Identities=9% Similarity=-0.016 Sum_probs=33.8
Q ss_pred cceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCC
Q 043381 68 GEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSN 144 (286)
Q Consensus 68 ~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~ 144 (286)
.+....||| .+++++.+. ...+||..+. +-...-. .....-....+-|||+.+++|+.
T Consensus 293 ~~~~~~~~~-~l~~~~~d~-------------~i~i~d~~~~---~~~~~~~--~~~~~i~~~~~s~~~~~l~~~~~ 350 (425)
T 1r5m_A 293 VSASWVGDD-KVISCSMDG-------------SVRLWSLKQN---TLLALSI--VDGVPIFAGRISQDGQKYAVAFM 350 (425)
T ss_dssp EEEEEETTT-EEEEEETTS-------------EEEEEETTTT---EEEEEEE--CTTCCEEEEEECTTSSEEEEEET
T ss_pred EEEEECCCC-EEEEEeCCC-------------cEEEEECCCC---cEeEecc--cCCccEEEEEEcCCCCEEEEEEC
Confidence 345677899 777776541 3468998765 3221111 11111223456789999999874
No 125
>1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B
Probab=45.46 E-value=23 Score=32.61 Aligned_cols=73 Identities=16% Similarity=0.238 Sum_probs=41.3
Q ss_pred ccceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCCCC
Q 043381 67 MGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPH 146 (286)
Q Consensus 67 ~~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~~ 146 (286)
.|..++.-||+||..|-...|.-|.+........|..-.. -. ++..++. -.+|+ ++|..||+||.-|-+.+
T Consensus 296 ~hs~al~~~G~v~~wG~n~~GqLG~g~~~~~~~~P~~v~~-l~---~v~~v~~----G~~hs-~alt~~G~v~~wG~n~~ 366 (413)
T 1a12_A 296 HHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISR-LP---AVSSVAC----GASVG-YAVTKDGRVFAWGMGTN 366 (413)
T ss_dssp SEEEEEETTSCEEEEECCGGGTTCSCTTCCCEEEEEECCS-SS---SEEEEEE----CSSEE-EEEETTSCEEEEECCTT
T ss_pred ceEEEEeCCCCEEEeeCCCCCccCCCCCCccccCCEEecc-cC---ceeEEEE----CcceE-EEEeCCCCEEEecCCCC
Confidence 5777888999999999766554443311111111211110 01 3333321 23675 55668999999998876
Q ss_pred CC
Q 043381 147 SR 148 (286)
Q Consensus 147 ~~ 148 (286)
..
T Consensus 367 gq 368 (413)
T 1a12_A 367 YQ 368 (413)
T ss_dssp ST
T ss_pred CC
Confidence 54
No 126
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=44.93 E-value=65 Score=27.17 Aligned_cols=60 Identities=12% Similarity=0.076 Sum_probs=33.9
Q ss_pred EEeCC--CcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCC--ceEEcCCCCCCCccceeeEEcCCCcEEEeCCC
Q 043381 71 LLLPT--GDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINE--RFSELTPTSKPRMCHSTSVVLPDGKILVAGSN 144 (286)
Q Consensus 71 v~Lpd--G~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~--~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~ 144 (286)
..-|| |+.+++|+.+. ...+||..+..-. ....+....... .-......|||+.|++|+.
T Consensus 292 ~~s~~~~~~~l~~~~~dg-------------~i~vwd~~~~~~~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~s~~~ 355 (366)
T 3k26_A 292 RFSMDFWQKMLALGNQVG-------------KLYVWDLEVEDPHKAKCTTLTHHKCGA-AIRQTSFSRDSSILIAVCD 355 (366)
T ss_dssp CCEECTTSSEEEEECTTS-------------CEEEEECCSSSGGGCEEEEECCTTCCS-CEEEEEECTTSSEEEEEET
T ss_pred EEcCCCCCcEEEEEecCC-------------cEEEEECCCCCCccccceEEcccccCC-ceEEEEeCCCCCeEEEEeC
Confidence 44567 99999998651 3468887765110 111222111011 1123455789999999885
No 127
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=44.43 E-value=1.7e+02 Score=26.07 Aligned_cols=68 Identities=12% Similarity=0.081 Sum_probs=34.1
Q ss_pred EEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceE-EcCCCCCCCccceeeEEcCCCcEEEeCC
Q 043381 71 LLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFS-ELTPTSKPRMCHSTSVVLPDGKILVAGS 143 (286)
Q Consensus 71 v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt-~~a~~~~~R~yHS~A~LLpDGrVlv~GG 143 (286)
...|++.++++++...+..-.. .........+||..+. +.. .+..-. ...-.+.+..-|||++|++|+
T Consensus 351 ~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~i~iwd~~~g---~~~~~l~~~~-~~~v~s~~~fspdg~~lasg~ 419 (435)
T 4e54_B 351 AWHPRYNLIVVGRYPDPNFKSC-TPYELRTIDVFDGNSG---KMMCQLYDPE-SSGISSLNEFNPMGDTLASAM 419 (435)
T ss_dssp EECSSSSCEEEECCCCTTSCCS-STTCCCCEEEECSSSC---CEEEEECCSS-CCCCCCEEEECTTSSCEEEEC
T ss_pred EEcCCCCEEEEEEcCCCCeEEE-EecCCCEEEEEECCCC---cEEEEEeCCC-CCcEEEEEEECCCCCEEEEEc
Confidence 4567888888887653221000 0001113468998776 332 221111 111112233568999999876
No 128
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=43.91 E-value=39 Score=28.43 Aligned_cols=62 Identities=16% Similarity=0.161 Sum_probs=35.0
Q ss_pred EeCC-CcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCCCC
Q 043381 72 LLPT-GDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPH 146 (286)
Q Consensus 72 ~Lpd-G~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~~ 146 (286)
..|| |++|+.||.+. +.-+||..+...........+.--...-....+-|||+.+++|+...
T Consensus 46 ~sp~~~~~l~S~s~D~-------------~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~ 108 (340)
T 4aow_A 46 TTPQFPDMILSASRDK-------------TIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDG 108 (340)
T ss_dssp ECTTCTTEEEEEETTS-------------CEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EeCCCCCEEEEEcCCC-------------eEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccc
Confidence 4576 68999998762 34688877652222222111111011122345678999999988654
No 129
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=43.64 E-value=45 Score=28.83 Aligned_cols=58 Identities=16% Similarity=0.023 Sum_probs=35.8
Q ss_pred eEEeC--CCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCC
Q 043381 70 MLLLP--TGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSN 144 (286)
Q Consensus 70 ~v~Lp--dG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~ 144 (286)
....| +|+.+++|+.+. +..+||..+. +-.............+ ...-|||+++++|+.
T Consensus 131 ~~~~~~~~~~~l~s~s~dg-------------~i~~wd~~~~---~~~~~~~~~~~~~i~~-~~~~pdg~~lasg~~ 190 (343)
T 3lrv_A 131 MYGHNEVNTEYFIWADNRG-------------TIGFQSYEDD---SQYIVHSAKSDVEYSS-GVLHKDSLLLALYSP 190 (343)
T ss_dssp EECCC---CCEEEEEETTC-------------CEEEEESSSS---CEEEEECCCSSCCCCE-EEECTTSCEEEEECT
T ss_pred EEcCCCCCCCEEEEEeCCC-------------cEEEEECCCC---cEEEEEecCCCCceEE-EEECCCCCEEEEEcC
Confidence 45667 999999988651 3569998876 4332221112222333 455799999999984
No 130
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=43.25 E-value=84 Score=27.59 Aligned_cols=57 Identities=12% Similarity=0.268 Sum_probs=29.0
Q ss_pred EeCCCc-EEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCC-CcEEEeCCC
Q 043381 72 LLPTGD-VLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPD-GKILVAGSN 144 (286)
Q Consensus 72 ~LpdG~-VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpD-GrVlv~GG~ 144 (286)
..++++ +++++|.+. ...+||..+. +-...-........-.....-|| ++++++|+.
T Consensus 189 ~s~~~~~~~~s~~~dg-------------~v~~wd~~~~---~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~ 247 (357)
T 4g56_B 189 ACPGKDTIFLSCGEDG-------------RILLWDTRKP---KPATRIDFCASDTIPTSVTWHPEKDDTFACGDE 247 (357)
T ss_dssp ECTTCSSCEEEEETTS-------------CEEECCTTSS---SCBCBCCCTTCCSCEEEEEECTTSTTEEEEEES
T ss_pred EccCCCceeeeeccCC-------------ceEEEECCCC---ceeeeeeeccccccccchhhhhcccceEEEeec
Confidence 457774 777777541 3468888775 32211111111111112334466 578888864
No 131
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=42.90 E-value=1e+02 Score=27.00 Aligned_cols=82 Identities=10% Similarity=0.017 Sum_probs=41.1
Q ss_pred cEEEEEecCCCCCeEeecCCCCccccceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCC
Q 043381 43 DCGRIEITNKSATWQREMMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSK 122 (286)
Q Consensus 43 s~~~id~~~~~~~W~~~~M~~~R~~~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~ 122 (286)
...++|+......++.. ... ..-.+...-|||+.+++.+...+ ...+||+.+. +....-..
T Consensus 192 ~v~~~d~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~l~~~~~~~~------------~i~~~d~~~~---~~~~~~~~-- 252 (433)
T 3bws_A 192 AVHVFDLKTLAYKATVD-LTG-KWSKILLYDPIRDLVYCSNWISE------------DISVIDRKTK---LEIRKTDK-- 252 (433)
T ss_dssp EEEEEETTTCCEEEEEE-CSS-SSEEEEEEETTTTEEEEEETTTT------------EEEEEETTTT---EEEEECCC--
T ss_pred EEEEEECCCceEEEEEc-CCC-CCeeEEEEcCCCCEEEEEecCCC------------cEEEEECCCC---cEEEEecC--
Confidence 45567765322223222 111 12233466789986644442211 3468999876 44332221
Q ss_pred CCccceeeEEcCCCcEEEeCCC
Q 043381 123 PRMCHSTSVVLPDGKILVAGSN 144 (286)
Q Consensus 123 ~R~yHS~A~LLpDGrVlv~GG~ 144 (286)
...-+ ...+-|||+.+++++.
T Consensus 253 ~~~~~-~~~~~~~g~~l~~~~~ 273 (433)
T 3bws_A 253 IGLPR-GLLLSKDGKELYIAQF 273 (433)
T ss_dssp CSEEE-EEEECTTSSEEEEEEE
T ss_pred CCCce-EEEEcCCCCEEEEEEC
Confidence 11122 3555689977777663
No 132
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=42.54 E-value=1.7e+02 Score=25.33 Aligned_cols=95 Identities=17% Similarity=0.099 Sum_probs=50.6
Q ss_pred CcEEEEEecCCCCCeEee-cCCCCccccceEEeCCCc-EEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCC
Q 043381 42 QDCGRIEITNKSATWQRE-MMPSPRVMGEMLLLPTGD-VLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTP 119 (286)
Q Consensus 42 ~s~~~id~~~~~~~W~~~-~M~~~R~~~~~v~LpdG~-VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~ 119 (286)
....+||+.. .+.... .++....-....+-|||+ +|++++ ....||+++. +.....-
T Consensus 203 ~~v~~id~~t--~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~----------------~v~~~d~~t~---~~~~~~~ 261 (328)
T 3dsm_A 203 PSLYRIDAET--FTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN----------------DIWRMPVEAD---RVPVRPF 261 (328)
T ss_dssp CEEEEEETTT--TEEEEEEECCTTCCCEEEEECTTSCEEEEESS----------------SEEEEETTCS---SCCSSCS
T ss_pred ceEEEEECCC--CeEEEEEecCCCCCceeEEEecCCCEEEEEcc----------------EEEEEECCCC---ceeeeee
Confidence 5667788653 444333 454333334456677665 566544 2347899877 4421111
Q ss_pred CCC-CCccceeeEEcC-CCcEEEeCCCCCCCcccCCCCCCCcccEEEEEeCC
Q 043381 120 TSK-PRMCHSTSVVLP-DGKILVAGSNPHSRYNLTSGSKYPTELRIEKFYPP 169 (286)
Q Consensus 120 ~~~-~R~yHS~A~LLp-DGrVlv~GG~~~~~~~~~~~~~~p~~~~vE~y~Pp 169 (286)
... .+.-++.| +-| +|+|||+...... ..-+|.+|+|.
T Consensus 262 ~~~~~~~p~gi~-vdp~~g~lyva~~~~y~-----------~~~~V~v~d~~ 301 (328)
T 3dsm_A 262 LEFRDTKYYGLT-VNPNNGEVYVADAIDYQ-----------QQGIVYRYSPQ 301 (328)
T ss_dssp BCCCSSCEEEEE-ECTTTCCEEEEECTTSS-----------SEEEEEEECTT
T ss_pred ecCCCCceEEEE-EcCCCCeEEEEcccccc-----------cCCEEEEECCC
Confidence 111 23334444 456 8999999732111 12378899886
No 133
>3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae}
Probab=41.73 E-value=32 Score=32.45 Aligned_cols=77 Identities=17% Similarity=0.147 Sum_probs=40.4
Q ss_pred ccceEEeCCCcEEEEcCccCCCCCccCCCCCC-------Ccc-EEecCCCCCCC-ceEEcCCCCCCCccceeeEEcCCCc
Q 043381 67 MGEMLLLPTGDVLIINGAKKGTAGWNFATDPN-------TTP-VLYEPNDPINE-RFSELTPTSKPRMCHSTSVVLPDGK 137 (286)
Q Consensus 67 ~~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~-------~~~-e~YdP~t~~g~-~wt~~a~~~~~R~yHS~A~LLpDGr 137 (286)
.|.+++.-||+||..|-...|.-|.+....+. ..+ .+.-|..-.+. ++..++ .-.+|+ ++|..||+
T Consensus 323 ~hs~~lt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~~~~P~~v~~~~~v~~Ia----~G~~hs-~al~~~G~ 397 (473)
T 3of7_A 323 HHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNNVPKFKSVA----AGSHHS-VAVAQNGI 397 (473)
T ss_dssp SEEEEEETTSCEEEEEECTTCTTCCCGGGCCTTCEECTTSCEEEEEEEEECCSSCCEEEEE----ECSSEE-EEEETTSC
T ss_pred CeEEEEeCCCeEEEEECCCCCccCCCccccccccccccCCceeeeccCcccCCCCceEEEE----eCCCeE-EEEeCCCc
Confidence 56778888999999997665554432111000 000 01111111000 222221 112675 55578999
Q ss_pred EEEeCCCCCCC
Q 043381 138 ILVAGSNPHSR 148 (286)
Q Consensus 138 Vlv~GG~~~~~ 148 (286)
||.-|.+.+..
T Consensus 398 vy~wG~n~~Gq 408 (473)
T 3of7_A 398 AYSWGFGETYA 408 (473)
T ss_dssp EEEEECCTTCT
T ss_pred EEEeeCCCCCC
Confidence 99999877654
No 134
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=41.40 E-value=1.8e+02 Score=26.00 Aligned_cols=22 Identities=9% Similarity=0.145 Sum_probs=16.3
Q ss_pred CCcEEEEcCccCCCCCccCCCCCCCccEEecCCCC
Q 043381 75 TGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDP 109 (286)
Q Consensus 75 dG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~ 109 (286)
||+.+++|+.+. ...+||..+.
T Consensus 251 d~~~l~s~~~d~-------------~v~vwd~~~~ 272 (450)
T 2vdu_B 251 KDYLLLSAGGDD-------------KIFAWDWKTG 272 (450)
T ss_dssp STTEEEEEESSS-------------EEEEEETTTC
T ss_pred CCCEEEEEeCCC-------------eEEEEECCCC
Confidence 999999998651 3468887765
No 135
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=41.03 E-value=1.4e+02 Score=25.02 Aligned_cols=53 Identities=13% Similarity=-0.075 Sum_probs=31.4
Q ss_pred eCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcC---CCcEEEeCCC
Q 043381 73 LPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLP---DGKILVAGSN 144 (286)
Q Consensus 73 LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLp---DGrVlv~GG~ 144 (286)
-|||+.+++|+.+. ...+||..+. +-...... ...- ......| |++.+++|+.
T Consensus 177 ~~~~~~l~~~~~d~-------------~i~i~d~~~~---~~~~~~~~--~~~v-~~~~~~~~~~~~~~l~~~~~ 232 (357)
T 3i2n_A 177 NQEERVVCAGYDNG-------------DIKLFDLRNM---ALRWETNI--KNGV-CSLEFDRKDISMNKLVATSL 232 (357)
T ss_dssp C-CCCEEEEEETTS-------------EEEEEETTTT---EEEEEEEC--SSCE-EEEEESCSSSSCCEEEEEES
T ss_pred CCCCCEEEEEccCC-------------eEEEEECccC---ceeeecCC--CCce-EEEEcCCCCCCCCEEEEECC
Confidence 38999999988641 3468988776 33221111 1112 2344567 8999998874
No 136
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=40.92 E-value=1.2e+02 Score=25.26 Aligned_cols=66 Identities=14% Similarity=0.137 Sum_probs=37.4
Q ss_pred CcEEEEEecCCCCCeEee-cCCCCccccceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEe--cCCCCCCCceEEcC
Q 043381 42 QDCGRIEITNKSATWQRE-MMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLY--EPNDPINERFSELT 118 (286)
Q Consensus 42 ~s~~~id~~~~~~~W~~~-~M~~~R~~~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~Y--dP~t~~g~~wt~~a 118 (286)
....++|+...+.+++.. .++....-.....-|||+.+++++...+ ...+| |+++. +++.+.
T Consensus 253 ~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~------------~v~v~~~d~~~g---~~~~~~ 317 (343)
T 1ri6_A 253 SLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSH------------HISVYEIVGEQG---LLHEKG 317 (343)
T ss_dssp TEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTC------------EEEEEEEETTTT---EEEEEE
T ss_pred CEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEecCCCC------------eEEEEEEcCCCc---eeeEcc
Confidence 456678876434556654 3333222344567899996665553211 34577 77777 777665
Q ss_pred CCCC
Q 043381 119 PTSK 122 (286)
Q Consensus 119 ~~~~ 122 (286)
....
T Consensus 318 ~~~~ 321 (343)
T 1ri6_A 318 RYAV 321 (343)
T ss_dssp EEEC
T ss_pred cccc
Confidence 4443
No 137
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=40.50 E-value=51 Score=28.36 Aligned_cols=28 Identities=14% Similarity=0.221 Sum_probs=18.9
Q ss_pred ceEEeC-CCcEEEEcCccCCCCCccCCCCCCCccEEecCCCC
Q 043381 69 EMLLLP-TGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDP 109 (286)
Q Consensus 69 ~~v~Lp-dG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~ 109 (286)
+....| +++++++++.+. ...+||..+.
T Consensus 104 ~~~~~~~~~~~l~s~~~d~-------------~i~iwd~~~~ 132 (408)
T 4a11_B 104 TVQWYPHDTGMFTSSSFDK-------------TLKVWDTNTL 132 (408)
T ss_dssp EEEECTTCTTCEEEEETTS-------------EEEEEETTTT
T ss_pred EEEEccCCCcEEEEEeCCC-------------eEEEeeCCCC
Confidence 345677 778888887651 3468887765
No 138
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=40.48 E-value=57 Score=28.79 Aligned_cols=60 Identities=7% Similarity=0.059 Sum_probs=37.0
Q ss_pred cceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCC
Q 043381 68 GEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGS 143 (286)
Q Consensus 68 ~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG 143 (286)
+....-+||++|+..|.. +. .+...+|+++. +-... ...+..+++..+.+-++++|++.-
T Consensus 24 ~Gl~~~~dg~Lyvstg~~-~~----------s~v~~iD~~tg---~v~~~--i~l~~~~fgeGi~~~g~~lyv~t~ 83 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLY-GR----------SSVRQVALQTG---KVENI--HKMDDSYFGEGLTLLNEKLYQVVW 83 (266)
T ss_dssp EEEEECSTTEEEEEECST-TT----------CEEEEEETTTC---CEEEE--EECCTTCCEEEEEEETTEEEEEET
T ss_pred ccEEEeCCCeEEEECCCC-CC----------CEEEEEECCCC---CEEEE--EecCCCcceEEEEEeCCEEEEEEe
Confidence 445566889999998842 11 14568999988 54332 112334565555544778998853
No 139
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=39.72 E-value=1.1e+02 Score=25.97 Aligned_cols=54 Identities=9% Similarity=0.047 Sum_probs=28.2
Q ss_pred CcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCC----cEEEeCCC
Q 043381 76 GDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDG----KILVAGSN 144 (286)
Q Consensus 76 G~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDG----rVlv~GG~ 144 (286)
|+.|++||.+. ..-+||.... ++|..+..+.--...-.....-||+ +.++.|+.
T Consensus 179 ~~~l~sgs~D~-------------~v~lWd~~~~--~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~ 236 (316)
T 3bg1_A 179 IKRFASGGCDN-------------LIKLWKEEED--GQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQ 236 (316)
T ss_dssp CCBEECCBTTS-------------BCCEEEECTT--SCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEET
T ss_pred cceEEEecCCC-------------eEEEEEeCCC--CccceeeecccCCCceEEEEecCCCCCCCceEEEEcC
Confidence 57788777652 2357887532 2566544332111111123345665 77888774
No 140
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=39.40 E-value=1.4e+02 Score=25.11 Aligned_cols=56 Identities=14% Similarity=0.224 Sum_probs=32.6
Q ss_pred eEEeCCCc-EEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCc-EEEeCCC
Q 043381 70 MLLLPTGD-VLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGK-ILVAGSN 144 (286)
Q Consensus 70 ~v~LpdG~-VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGr-Vlv~GG~ 144 (286)
...-|||+ +|+.+..+. ...+||..+. +....-+ ....-++ ..+-|||+ +|++...
T Consensus 277 ~~~s~dg~~l~v~~~~~~-------------~v~~~d~~~~---~~~~~~~--~~~~~~~-~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 277 VLFNPARNEAYVTHRQAG-------------KVSVIDAKSY---KVVKTFD--TPTHPNS-LALSADGKTLYVSVKQ 334 (353)
T ss_dssp EEEETTTTEEEEEETTTT-------------EEEEEETTTT---EEEEEEE--CCSEEEE-EEECTTSCEEEEEEEC
T ss_pred EEECCCCCEEEEEECCCC-------------eEEEEECCCC---eEEEEEe--cCCCCCe-EEEcCCCCEEEEEEcc
Confidence 56789998 677654321 3568998876 4432211 1222233 44568998 7776554
No 141
>3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae}
Probab=38.99 E-value=33 Score=32.30 Aligned_cols=75 Identities=13% Similarity=0.124 Sum_probs=42.2
Q ss_pred ccceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCC---CCCceEEcCCCCCCCccceeeEEcCCCcEEEeCC
Q 043381 67 MGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDP---INERFSELTPTSKPRMCHSTSVVLPDGKILVAGS 143 (286)
Q Consensus 67 ~~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~---~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG 143 (286)
.|..++.-||+||..|-...|--|.+...+ ....++.|..- .+.++..++. -.+|+ ++|..||+||.-|.
T Consensus 267 ~hs~alt~~G~v~~wG~n~~GqlG~~~~~~--~~~~~~~P~~v~~~~~~~i~~ia~----G~~hs-~~lt~~G~v~~wG~ 339 (473)
T 3of7_A 267 NHCFALTKDNKLVSWGLNQFGQCGVSEDVE--DGALVTKPKRLALPDNVVIRSIAA----GEHHS-LILSQDGDLYSCGR 339 (473)
T ss_dssp SEEEEEETTSCEEEEEECTTSTTCCCSCCC--TTCEEEEEEECCCCTTCCEEEEEE----CSSEE-EEEETTSCEEEEEE
T ss_pred CeEEEEecCCCEEEeCCCCCCCcCCCCccc--CCceeeccccccccCCccEEEEEe----CCCeE-EEEeCCCeEEEEEC
Confidence 567788889999999876555444332110 00112222211 1124444332 23565 66678999999998
Q ss_pred CCCCC
Q 043381 144 NPHSR 148 (286)
Q Consensus 144 ~~~~~ 148 (286)
+....
T Consensus 340 n~~Gq 344 (473)
T 3of7_A 340 LDMFE 344 (473)
T ss_dssp CTTCT
T ss_pred CCCCc
Confidence 76543
No 142
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=37.92 E-value=3e+02 Score=26.90 Aligned_cols=54 Identities=7% Similarity=0.095 Sum_probs=31.5
Q ss_pred EEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCC
Q 043381 71 LLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSN 144 (286)
Q Consensus 71 v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~ 144 (286)
++-.+|++|+... .|. ..|||.+. ++...... - ....+.+....||+++++|-+
T Consensus 564 i~~~~g~lWi~t~--~Gl-------------~~~~~~~~---~~~~~~~~-~-~~~~~~~~~~~~G~l~fG~~~ 617 (758)
T 3ott_A 564 MTCVKNSIWVSTT--NGL-------------WIIDRKTM---DARQQNMT-N-KRFTSLLFDPKEDCVYLGGAD 617 (758)
T ss_dssp EEEETTEEEEEES--SCE-------------EEEETTTC---CEEEC--C-C-CCCSEEEEETTTTEEEEECBS
T ss_pred EEECCCCEEEECC--CCe-------------EEEcCCCc---eeEEecCC-C-CceeeeEEECCCCcEEEecCC
Confidence 3445788877542 222 58999988 77653211 1 112234555679999988763
No 143
>2ydt_A EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; 1.60A {Gibberella zeae} PDB: 2w5n_A* 2w5o_A* 2ydp_A
Probab=37.71 E-value=38 Score=31.36 Aligned_cols=68 Identities=18% Similarity=0.239 Sum_probs=40.0
Q ss_pred ccceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCC-----CCccceeeEEcC-------
Q 043381 67 MGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSK-----PRMCHSTSVVLP------- 134 (286)
Q Consensus 67 ~~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~-----~R~yHS~A~LLp------- 134 (286)
+...+.|+||+||+. +.. +.. ........+|- .++-|++|+.+....- ...+|.+...+|
T Consensus 30 yp~~v~L~dG~LLa~--~~~----~~~-~~~~~~~~v~r-S~DgG~TW~~~~~v~~~~~g~~~~~~P~l~~lP~~i~~~~ 101 (367)
T 2ydt_A 30 YARPLELSDGTLLGT--WEN----YSP-EPPNVWFPIVK-SKDGGKTWKEISKVKDTQNNWGLRYQPQLYELPRAFGKYP 101 (367)
T ss_dssp EEEEEECTTSCEEEE--EEE----CCC-SSSCCCEEEEE-ESSTTSSCEEEEEECCCSSSSCEEEEEEEEECSSCBTTBC
T ss_pred ceeEEEcCCCCEEEE--EEe----ccC-CCCCeEEEEEE-ECCCCcCcCcCcccCCCCCCcccccCCeEEEccccccccC
Confidence 367799999999985 110 000 00111224565 4667889998543221 223476666666
Q ss_pred CCcEEEeC
Q 043381 135 DGKILVAG 142 (286)
Q Consensus 135 DGrVlv~G 142 (286)
+|+||.++
T Consensus 102 ~G~lL~~~ 109 (367)
T 2ydt_A 102 KGTVLCSG 109 (367)
T ss_dssp TTCEEEEE
T ss_pred CCcEEEEE
Confidence 89999985
No 144
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=37.55 E-value=44 Score=27.61 Aligned_cols=58 Identities=12% Similarity=0.156 Sum_probs=35.2
Q ss_pred EEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCCCC
Q 043381 71 LLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPH 146 (286)
Q Consensus 71 v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~~ 146 (286)
+..+||+.+++|+.+ | ...+||..+. +....-... ...-......|||+.+++|+...
T Consensus 24 ~~~~~~~~l~s~~~d-g------------~v~vw~~~~~---~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~dg 81 (313)
T 3odt_A 24 VVAVDDSKVASVSRD-G------------TVRLWSKDDQ---WLGTVVYTG--QGFLNSVCYDSEKELLLFGGKDT 81 (313)
T ss_dssp EEEEETTEEEEEETT-S------------EEEEEEESSS---EEEEEEEEC--SSCEEEEEEETTTTEEEEEETTS
T ss_pred EEecCCCEEEEEEcC-C------------cEEEEECCCC---EEEEEeecC--CccEEEEEECCCCCEEEEecCCC
Confidence 444899999998865 1 3468888665 332211111 11222345578999999988654
No 145
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=37.33 E-value=56 Score=28.92 Aligned_cols=57 Identities=11% Similarity=0.160 Sum_probs=35.3
Q ss_pred EEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCce-EEcCCCCCCCccceeeEEcCCCcEEEeCCCC
Q 043381 71 LLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERF-SELTPTSKPRMCHSTSVVLPDGKILVAGSNP 145 (286)
Q Consensus 71 v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~w-t~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~ 145 (286)
..-|||+.+++|+.+. +..+||-.+. +- ..+-....... .....-|||+.|+.|+.+
T Consensus 276 ~~Spdg~~lasgs~D~-------------~V~iwd~~~~---~~~~~~~~gH~~~V--~~v~fSpdg~~laS~S~D 333 (365)
T 4h5i_A 276 DVDMKGELAVLASNDN-------------SIALVKLKDL---SMSKIFKQAHSFAI--TEVTISPDSTYVASVSAA 333 (365)
T ss_dssp EECTTSCEEEEEETTS-------------CEEEEETTTT---EEEEEETTSSSSCE--EEEEECTTSCEEEEEETT
T ss_pred EECCCCCceEEEcCCC-------------EEEEEECCCC---cEEEEecCcccCCE--EEEEECCCCCEEEEEeCC
Confidence 4679999999998762 4568998765 32 22111111111 124457999999999853
No 146
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=36.75 E-value=66 Score=27.34 Aligned_cols=58 Identities=9% Similarity=0.108 Sum_probs=35.0
Q ss_pred ceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCC
Q 043381 69 EMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSN 144 (286)
Q Consensus 69 ~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~ 144 (286)
+.+.-+||++|+++.... ...+||+++. ++....... ...-++ ..+-+||++|++...
T Consensus 49 ~~~~~~~g~l~~~~~~~~-------------~i~~~d~~~~---~~~~~~~~~-~~~~~~-i~~~~dg~l~v~~~~ 106 (333)
T 2dg1_A 49 GLNFDRQGQLFLLDVFEG-------------NIFKINPETK---EIKRPFVSH-KANPAA-IKIHKDGRLFVCYLG 106 (333)
T ss_dssp EEEECTTSCEEEEETTTC-------------EEEEECTTTC---CEEEEEECS-SSSEEE-EEECTTSCEEEEECT
T ss_pred CcEECCCCCEEEEECCCC-------------EEEEEeCCCC---cEEEEeeCC-CCCcce-EEECCCCcEEEEeCC
Confidence 334569999998865431 2358899887 665432111 112233 344689999998654
No 147
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=36.22 E-value=1.5e+02 Score=24.73 Aligned_cols=80 Identities=11% Similarity=0.121 Sum_probs=42.8
Q ss_pred CcEEEEEecCCCCCeEeecCCCCccccceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCC
Q 043381 42 QDCGRIEITNKSATWQREMMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTS 121 (286)
Q Consensus 42 ~s~~~id~~~~~~~W~~~~M~~~R~~~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~ 121 (286)
....++|+.. . .+....+.... .....-+||++|+...... ...+||+.+. +++.+....
T Consensus 50 ~~i~~~~~~~--~-~~~~~~~~~~~-~~l~~~~dg~l~v~~~~~~-------------~i~~~d~~~g---~~~~~~~~~ 109 (296)
T 3e5z_A 50 NRTWAWSDDG--Q-LSPEMHPSHHQ-NGHCLNKQGHLIACSHGLR-------------RLERQREPGG---EWESIADSF 109 (296)
T ss_dssp TEEEEEETTS--C-EEEEESSCSSE-EEEEECTTCCEEEEETTTT-------------EEEEECSTTC---CEEEEECEE
T ss_pred CEEEEEECCC--C-eEEEECCCCCc-ceeeECCCCcEEEEecCCC-------------eEEEEcCCCC---cEEEEeecc
Confidence 3455666643 2 33223333332 2345568999998754221 3468999887 776543211
Q ss_pred C-CC-ccceeeEEcCCCcEEEe
Q 043381 122 K-PR-MCHSTSVVLPDGKILVA 141 (286)
Q Consensus 122 ~-~R-~yHS~A~LLpDGrVlv~ 141 (286)
. .+ ..-.....-|||++|++
T Consensus 110 ~~~~~~~~~~i~~d~~G~l~vt 131 (296)
T 3e5z_A 110 EGKKLNSPNDVCLAPDGSLWFS 131 (296)
T ss_dssp TTEECCCCCCEEECTTSCEEEE
T ss_pred CCCCCCCCCCEEECCCCCEEEE
Confidence 1 11 01112445799999997
No 148
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=36.19 E-value=1.2e+02 Score=29.32 Aligned_cols=17 Identities=24% Similarity=0.206 Sum_probs=13.1
Q ss_pred eEEcCCCcEEEeCCCCC
Q 043381 130 SVVLPDGKILVAGSNPH 146 (286)
Q Consensus 130 A~LLpDGrVlv~GG~~~ 146 (286)
...-|||+.|++||.+.
T Consensus 668 l~~spdg~~l~sgs~Dg 684 (694)
T 3dm0_A 668 LNWSADGSTLFSGYTDG 684 (694)
T ss_dssp EEECTTSSEEEEEETTS
T ss_pred EEEcCCCCEEEEEcCCC
Confidence 44579999999998543
No 149
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=36.01 E-value=60 Score=27.67 Aligned_cols=78 Identities=17% Similarity=0.138 Sum_probs=42.5
Q ss_pred cEEEEEecCCCCCeEeecCCCCccccceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCC-
Q 043381 43 DCGRIEITNKSATWQREMMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTS- 121 (286)
Q Consensus 43 s~~~id~~~~~~~W~~~~M~~~R~~~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~- 121 (286)
...++|+.. ...+...++ .+. .....-+||++||..+ . ...+||+++. +++.+....
T Consensus 36 ~i~~~d~~~--~~~~~~~~~-~~~-~~i~~~~dG~l~v~~~--~-------------~l~~~d~~~g---~~~~~~~~~~ 93 (297)
T 3g4e_A 36 KVCRWDSFT--KQVQRVTMD-APV-SSVALRQSGGYVATIG--T-------------KFCALNWKEQ---SAVVLATVDN 93 (297)
T ss_dssp EEEEEETTT--CCEEEEECS-SCE-EEEEEBTTSSEEEEET--T-------------EEEEEETTTT---EEEEEEECCT
T ss_pred EEEEEECCC--CcEEEEeCC-Cce-EEEEECCCCCEEEEEC--C-------------eEEEEECCCC---cEEEEEecCC
Confidence 445677653 222222222 122 3346679999777532 1 2358999887 777654332
Q ss_pred -CCCccceeeEEcCCCcEEEeC
Q 043381 122 -KPRMCHSTSVVLPDGKILVAG 142 (286)
Q Consensus 122 -~~R~yHS~A~LLpDGrVlv~G 142 (286)
.+.........-|||++|++-
T Consensus 94 ~~~~~~~~di~~d~dG~l~~~~ 115 (297)
T 3g4e_A 94 DKKNNRFNDGKVDPAGRYFAGT 115 (297)
T ss_dssp TCSSEEEEEEEECTTSCEEEEE
T ss_pred CCCCCCCCCEEECCCCCEEEec
Confidence 122212234557899999864
No 150
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=35.73 E-value=1.4e+02 Score=27.37 Aligned_cols=59 Identities=10% Similarity=0.104 Sum_probs=36.4
Q ss_pred ceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCC-CCccceeeEEcC----------CCc
Q 043381 69 EMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSK-PRMCHSTSVVLP----------DGK 137 (286)
Q Consensus 69 ~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~-~R~yHS~A~LLp----------DGr 137 (286)
+...-|||+.+++|+.+. ...+||..+. +-... ... -...-.....-| ||+
T Consensus 493 ~~~~s~~g~~l~~~~~dg-------------~i~iw~~~~~---~~~~~--~~~~h~~~v~~~~~sp~~~~~~~~~~~~~ 554 (615)
T 1pgu_A 493 YISISPSETYIAAGDVMG-------------KILLYDLQSR---EVKTS--RWAFRTSKINAISWKPAEKGANEEEIEED 554 (615)
T ss_dssp EEEECTTSSEEEEEETTS-------------CEEEEETTTT---EEEEC--CSCCCSSCEEEEEECCCC------CCSCC
T ss_pred EEEECCCCCEEEEcCCCC-------------eEEEeeCCCC---cceeE--eecCCCCceeEEEEcCccccccccccCCC
Confidence 446679999999998651 3468888765 32221 111 111122345568 999
Q ss_pred EEEeCCCC
Q 043381 138 ILVAGSNP 145 (286)
Q Consensus 138 Vlv~GG~~ 145 (286)
.+++|+..
T Consensus 555 ~l~~~~~d 562 (615)
T 1pgu_A 555 LVATGSLD 562 (615)
T ss_dssp EEEEEETT
T ss_pred EEEEEcCC
Confidence 99999853
No 151
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=35.00 E-value=87 Score=25.64 Aligned_cols=57 Identities=12% Similarity=0.083 Sum_probs=33.0
Q ss_pred ceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCC
Q 043381 69 EMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGS 143 (286)
Q Consensus 69 ~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG 143 (286)
+...-+||++||...... ....||+. . +++..........-++.+ +.+||++|++..
T Consensus 24 ~i~~d~~g~l~v~~~~~~-------------~v~~~~~~-~---~~~~~~~~~~~~~~~~i~-~~~~g~l~v~~~ 80 (300)
T 2qc5_A 24 GITSSEDGKVWFTQHKAN-------------KISSLDQS-G---RIKEFEVPTPDAKVMCLI-VSSLGDIWFTEN 80 (300)
T ss_dssp EEEECTTSCEEEEETTTT-------------EEEEECTT-S---CEEEEECSSTTCCEEEEE-ECTTSCEEEEET
T ss_pred eeeECCCCCEEEEcCCCC-------------eEEEECCC-C---ceEEEECCCCCCcceeEE-ECCCCCEEEEec
Confidence 345668999999764221 23578888 5 565432111112233433 358899999865
No 152
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=34.30 E-value=1e+02 Score=27.06 Aligned_cols=64 Identities=9% Similarity=0.092 Sum_probs=34.8
Q ss_pred cceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCc-----c-------ceeeEEcCC
Q 043381 68 GEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRM-----C-------HSTSVVLPD 135 (286)
Q Consensus 68 ~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~-----y-------HS~A~LLpD 135 (286)
.+....|||+.+++++. + ...+||..+. ++....+......+. | ......-||
T Consensus 289 ~~~~~s~~g~~l~~~~~--~------------~v~iwd~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~ 353 (447)
T 3dw8_B 289 SDVKFSHSGRYMMTRDY--L------------SVKVWDLNME-NRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGS 353 (447)
T ss_dssp EEEEECTTSSEEEEEES--S------------EEEEEETTCC-SSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTT
T ss_pred EEEEECCCCCEEEEeeC--C------------eEEEEeCCCC-ccccceeeccccccccccccccccccccceEEEECCC
Confidence 34567899999998764 1 3568888752 111111110000000 0 001456799
Q ss_pred CcEEEeCCCCC
Q 043381 136 GKILVAGSNPH 146 (286)
Q Consensus 136 GrVlv~GG~~~ 146 (286)
|+.+++|+...
T Consensus 354 ~~~l~s~s~dg 364 (447)
T 3dw8_B 354 DSVVMTGSYNN 364 (447)
T ss_dssp SSEEEEECSTT
T ss_pred CCEEEEeccCC
Confidence 99999998543
No 153
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=34.27 E-value=2.2e+02 Score=24.30 Aligned_cols=111 Identities=13% Similarity=0.173 Sum_probs=0.0
Q ss_pred CccE-EEEEcCCCCCCCcccCCCccccccCcEEEEEecCCCC----C-eEee------cCCCCccccceEEeCCCc-EEE
Q 043381 14 IRAE-VLICGGAKPEAGMLAGKGEFMNALQDCGRIEITNKSA----T-WQRE------MMPSPRVMGEMLLLPTGD-VLI 80 (286)
Q Consensus 14 ~~~~-Vlv~GG~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~----~-W~~~------~M~~~R~~~~~v~LpdG~-Vlv 80 (286)
.+++ +++++... +...++++..... + .... ..+....-.....-|||+ +|+
T Consensus 164 pdg~~l~~~~~~~----------------~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v 227 (361)
T 3scy_A 164 PDGKYLLADDLGT----------------DQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYL 227 (361)
T ss_dssp TTSSEEEEEETTT----------------TEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEE
T ss_pred CCCCEEEEEeCCC----------------CEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEE
Q ss_pred EcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCCC-CCCcccCCCCCCCc
Q 043381 81 INGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNP-HSRYNLTSGSKYPT 159 (286)
Q Consensus 81 vGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~-~~~~~~~~~~~~p~ 159 (286)
++-... +..+||..+..-.....+..............+-|||+.+.+.+.. ..
T Consensus 228 ~~~~~~-------------~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~------------ 282 (361)
T 3scy_A 228 INEIGG-------------TVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKAD------------ 282 (361)
T ss_dssp EETTTC-------------EEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSC------------
T ss_pred EcCCCC-------------eEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCC------------
Q ss_pred ccEEEEEe
Q 043381 160 ELRIEKFY 167 (286)
Q Consensus 160 ~~~vE~y~ 167 (286)
+|.+|+
T Consensus 283 --~i~v~~ 288 (361)
T 3scy_A 283 --GVAIFK 288 (361)
T ss_dssp --EEEEEE
T ss_pred --EEEEEE
No 154
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=34.11 E-value=1.1e+02 Score=26.20 Aligned_cols=63 Identities=11% Similarity=-0.015 Sum_probs=35.7
Q ss_pred cceEEeCC----C---cEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCc------eEEcCCCCCC--CccceeeEE
Q 043381 68 GEMLLLPT----G---DVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINER------FSELTPTSKP--RMCHSTSVV 132 (286)
Q Consensus 68 ~~~v~Lpd----G---~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~------wt~~a~~~~~--R~yHS~A~L 132 (286)
.+....|| | +.+++++.+. ...+||..+. + +..+...... ...-....+
T Consensus 66 ~~~~~~~~~~~~g~~~~~l~s~~~dg-------------~i~iw~~~~~---~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 129 (397)
T 1sq9_A 66 HHVDVLQAIERDAFELCLVATTSFSG-------------DLLFYRITRE---DETKKVIFEKLDLLDSDMKKHSFWALKW 129 (397)
T ss_dssp EEEEEEEEEETTTEEEEEEEEEETTS-------------CEEEEEEEEC---TTTCCEEEEEECCSCTTGGGSCEEEEEE
T ss_pred EEEEEecccccCCccccEEEEEcCCC-------------CEEEEEccCC---cccccccceeecccccccCCCcEEEEEE
Confidence 34456788 9 9999988651 3468887765 3 5555433211 122233455
Q ss_pred c----CCCcE-EEeCCCCC
Q 043381 133 L----PDGKI-LVAGSNPH 146 (286)
Q Consensus 133 L----pDGrV-lv~GG~~~ 146 (286)
. |||+. +++|+...
T Consensus 130 ~~~~~~~~~~~l~~~~~dg 148 (397)
T 1sq9_A 130 GASNDRLLSHRLVATDVKG 148 (397)
T ss_dssp ECCC----CEEEEEEETTS
T ss_pred eeccCCCCceEEEEEeCCC
Confidence 6 89998 88887543
No 155
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=34.01 E-value=1.8e+02 Score=25.16 Aligned_cols=81 Identities=15% Similarity=0.200 Sum_probs=43.8
Q ss_pred cEEEEEecCCCCCeEee-cCCC------CccccceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceE
Q 043381 43 DCGRIEITNKSATWQRE-MMPS------PRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFS 115 (286)
Q Consensus 43 s~~~id~~~~~~~W~~~-~M~~------~R~~~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt 115 (286)
....+|+.+....|+.. .-.. ...........+|+||+..... ....+|+++.. ..|+
T Consensus 64 ~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~g--------------~l~a~d~~tG~-~~W~ 128 (376)
T 3q7m_A 64 LVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKA--------------QVYALNTSDGT-VAWQ 128 (376)
T ss_dssp EEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETTS--------------EEEEEETTTCC-EEEE
T ss_pred eEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCCC--------------EEEEEECCCCC-EEEE
Confidence 45667876656789876 2211 1222344566688888854311 24578887652 2676
Q ss_pred EcCCCCCCCccceeeEEcCCCcEEEeCC
Q 043381 116 ELTPTSKPRMCHSTSVVLPDGKILVAGS 143 (286)
Q Consensus 116 ~~a~~~~~R~yHS~A~LLpDGrVlv~GG 143 (286)
.-....+ .+ +.++.+|+|++...
T Consensus 129 ~~~~~~~----~~-~p~~~~~~v~v~~~ 151 (376)
T 3q7m_A 129 TKVAGEA----LS-RPVVSDGLVLIHTS 151 (376)
T ss_dssp EECSSCC----CS-CCEEETTEEEEECT
T ss_pred EeCCCce----Ec-CCEEECCEEEEEcC
Confidence 5332211 22 22334888888654
No 156
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=33.83 E-value=1.2e+02 Score=27.02 Aligned_cols=83 Identities=12% Similarity=0.147 Sum_probs=46.3
Q ss_pred CcEEEEEecCCCCCeEee-cCCCCcc-ccceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCC
Q 043381 42 QDCGRIEITNKSATWQRE-MMPSPRV-MGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTP 119 (286)
Q Consensus 42 ~s~~~id~~~~~~~W~~~-~M~~~R~-~~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~ 119 (286)
+++.++|... +..... .+..... -.+...-|||+.+++|+.+. +..+||.++. +-...-.
T Consensus 125 ~tV~lWd~~t--g~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg-------------~v~iWd~~~~---~~~~~~~ 186 (420)
T 4gga_A 125 NSVYLWSASS--GDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSA-------------EVQLWDVQQQ---KRLRNMT 186 (420)
T ss_dssp TEEEEEETTT--CCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTS-------------CEEEEETTTT---EEEEEEC
T ss_pred CEEEEEECCC--CCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCC-------------eEEEEEcCCC---cEEEEEe
Confidence 3445566542 333332 4433221 12334679999999998651 4579998876 3322111
Q ss_pred CCCCCccceeeEEcCCCcEEEeCCCCC
Q 043381 120 TSKPRMCHSTSVVLPDGKILVAGSNPH 146 (286)
Q Consensus 120 ~~~~R~yHS~A~LLpDGrVlv~GG~~~ 146 (286)
....+ ...+-.|+++++.|+...
T Consensus 187 ~h~~~----v~~~s~~~~~l~sgs~d~ 209 (420)
T 4gga_A 187 SHSAR----VGSLSWNSYILSSGSRSG 209 (420)
T ss_dssp CCSSC----EEEEEEETTEEEEEETTS
T ss_pred CCCCc----eEEEeeCCCEEEEEeCCC
Confidence 11222 234456899999988654
No 157
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=33.58 E-value=1.2e+02 Score=26.61 Aligned_cols=28 Identities=7% Similarity=0.232 Sum_probs=21.0
Q ss_pred ceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCC
Q 043381 69 EMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDP 109 (286)
Q Consensus 69 ~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~ 109 (286)
+....|||+.+++|+.+. ...+||..+.
T Consensus 144 ~v~~spdg~~l~sgs~dg-------------~v~iwd~~~~ 171 (357)
T 4g56_B 144 TLSVFSDGTQAVSGGKDF-------------SVKVWDLSQK 171 (357)
T ss_dssp EEEECSSSSEEEEEETTS-------------CEEEEETTTT
T ss_pred EEEECCCCCEEEEEeCCC-------------eEEEEECCCC
Confidence 345689999999998652 3468988776
No 158
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=33.12 E-value=1.6e+02 Score=26.20 Aligned_cols=57 Identities=11% Similarity=0.149 Sum_probs=34.6
Q ss_pred EEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceE-EcCCCCCCCccceeeEEcCCCcEEEeCCCCC
Q 043381 71 LLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFS-ELTPTSKPRMCHSTSVVLPDGKILVAGSNPH 146 (286)
Q Consensus 71 v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt-~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~~ 146 (286)
.+-++|+.+++|+.+. ...+||..+. +-. .+.. .... -.....-|||+.+++|+...
T Consensus 275 ~~~~~~~~l~~~~~d~-------------~i~vwd~~~~---~~~~~~~~-~~~~--v~~~~~~~~~~~l~sg~~dg 332 (464)
T 3v7d_B 275 TVSGHGNIVVSGSYDN-------------TLIVWDVAQM---KCLYILSG-HTDR--IYSTIYDHERKRCISASMDT 332 (464)
T ss_dssp EEEEETTEEEEEETTS-------------CEEEEETTTT---EEEEEECC-CSSC--EEEEEEETTTTEEEEEETTS
T ss_pred EEcCCCCEEEEEeCCC-------------eEEEEECCCC---cEEEEecC-CCCC--EEEEEEcCCCCEEEEEeCCC
Confidence 3467899999988652 3568888765 322 2211 1111 12345568999999988543
No 159
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=32.98 E-value=1.2e+02 Score=25.86 Aligned_cols=17 Identities=29% Similarity=0.354 Sum_probs=13.0
Q ss_pred eEEcCCCcEEEeCCCCC
Q 043381 130 SVVLPDGKILVAGSNPH 146 (286)
Q Consensus 130 A~LLpDGrVlv~GG~~~ 146 (286)
...-|||+.|++|+.+.
T Consensus 292 ~~~spdg~~l~sg~~Dg 308 (319)
T 3frx_A 292 LAWSADGQTLFAGYTDN 308 (319)
T ss_dssp EEECTTSSEEEEEETTS
T ss_pred EEECCCCCEEEEeecCc
Confidence 44569999999998543
No 160
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=32.12 E-value=1.7e+02 Score=25.61 Aligned_cols=82 Identities=10% Similarity=0.105 Sum_probs=45.3
Q ss_pred CcEEEEEecCCCCCeEee-cCCCCccccceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceE-EcCC
Q 043381 42 QDCGRIEITNKSATWQRE-MMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFS-ELTP 119 (286)
Q Consensus 42 ~s~~~id~~~~~~~W~~~-~M~~~R~~~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt-~~a~ 119 (286)
.+..++|+.. ...... .......-.+....|||+.+++|+.+ | ...+||..+. +.. .+.
T Consensus 113 ~~v~lw~~~~--~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~d-g------------~i~iwd~~~~---~~~~~~~- 173 (401)
T 4aez_A 113 RNVYVWNADS--GSVSALAETDESTYVASVKWSHDGSFLSVGLGN-G------------LVDIYDVESQ---TKLRTMA- 173 (401)
T ss_dssp TEEEEEETTT--CCEEEEEECCTTCCEEEEEECTTSSEEEEEETT-S------------CEEEEETTTC---CEEEEEC-
T ss_pred CeEEEeeCCC--CcEeEeeecCCCCCEEEEEECCCCCEEEEECCC-C------------eEEEEECcCC---eEEEEec-
Confidence 4455667653 333333 33333444455678999999998865 1 3578998776 332 222
Q ss_pred CCCCCccceeeEEcCCCcEEEeCCCCC
Q 043381 120 TSKPRMCHSTSVVLPDGKILVAGSNPH 146 (286)
Q Consensus 120 ~~~~R~yHS~A~LLpDGrVlv~GG~~~ 146 (286)
....+ ...+-.+++.+++|+...
T Consensus 174 ~~~~~----v~~~~~~~~~l~~~~~dg 196 (401)
T 4aez_A 174 GHQAR----VGCLSWNRHVLSSGSRSG 196 (401)
T ss_dssp CCSSC----EEEEEEETTEEEEEETTS
T ss_pred CCCCc----eEEEEECCCEEEEEcCCC
Confidence 11111 112222788888887543
No 161
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=31.94 E-value=60 Score=26.87 Aligned_cols=44 Identities=16% Similarity=0.285 Sum_probs=25.5
Q ss_pred ccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCCCC
Q 043381 100 TPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPH 146 (286)
Q Consensus 100 ~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~~ 146 (286)
+..+||.++. +...+-........-......|||+.+++|+...
T Consensus 46 tV~iWd~~tg---~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg 89 (318)
T 4ggc_A 46 SVYLWSASSG---DILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSA 89 (318)
T ss_dssp EEEEEETTTC---CEEEEEECCSTTCCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEECCCC---CEEEEEEecCCCCeEEEEEECCCCCEEEEEECCC
Confidence 4568888876 5443222211111223355678999999998654
No 162
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=31.82 E-value=2.3e+02 Score=26.90 Aligned_cols=58 Identities=14% Similarity=0.245 Sum_probs=34.2
Q ss_pred ccceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecC--CCCCCCceEEcCCCCCCCccceeeEEcC----CCcEEE
Q 043381 67 MGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEP--NDPINERFSELTPTSKPRMCHSTSVVLP----DGKILV 140 (286)
Q Consensus 67 ~~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP--~t~~g~~wt~~a~~~~~R~yHS~A~LLp----DGrVlv 140 (286)
-|...+-|||+.+.+++.+ -+..+||. .+. +.-..+. ....-++.| +-| ||+.+.
T Consensus 181 ~~~v~~spdg~~l~v~~~d-------------~~V~v~D~~~~t~--~~~~~i~---~g~~p~~va-~sp~~~~dg~~l~ 241 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRD-------------ARIDMIDLWAKEP--TKVAEIK---IGIEARSVE-SSKFKGYEDRYTI 241 (543)
T ss_dssp EEEEEECTTSCEEEEEETT-------------SEEEEEETTSSSC--EEEEEEE---CCSEEEEEE-ECCSTTCTTTEEE
T ss_pred cceEEECCCCCEEEEECCC-------------CeEEEEECcCCCC--cEEEEEe---cCCCcceEE-eCCCcCCCCCEEE
Confidence 4555688999887776643 14579999 443 1222232 222223344 568 998777
Q ss_pred eCC
Q 043381 141 AGS 143 (286)
Q Consensus 141 ~GG 143 (286)
+++
T Consensus 242 v~~ 244 (543)
T 1nir_A 242 AGA 244 (543)
T ss_dssp EEE
T ss_pred EEE
Confidence 765
No 163
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=31.81 E-value=1.3e+02 Score=27.74 Aligned_cols=115 Identities=10% Similarity=0.040 Sum_probs=62.7
Q ss_pred ccEEEEEcCCCCCCCcccCCCccccccCcEEEEEec---CCCCCeEee--cCCC---------CccccceEEeCCCcEEE
Q 043381 15 RAEVLICGGAKPEAGMLAGKGEFMNALQDCGRIEIT---NKSATWQRE--MMPS---------PRVMGEMLLLPTGDVLI 80 (286)
Q Consensus 15 ~~~Vlv~GG~~~~~~~~~~~~~~~~a~~s~~~id~~---~~~~~W~~~--~M~~---------~R~~~~~v~LpdG~Vlv 80 (286)
.++++||--. ..++... +......+...+||+. .....|... .... ....-++++=++|++||
T Consensus 76 ~grL~vv~~~-~~af~~~--g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYV 152 (334)
T 2p9w_A 76 SKRLFAVMKN-AKSFNFA--DQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYV 152 (334)
T ss_dssp CCEEEEEEEE-TTTTCTT--SCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEE
T ss_pred CCcEEEEEcc-ccccccc--ccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEE
Confidence 4788887211 1122211 2223345677889987 456677764 2221 12355889999999999
Q ss_pred EcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCC
Q 043381 81 INGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSN 144 (286)
Q Consensus 81 vGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~ 144 (286)
++-... ..-..+||+...-..|-.-.+....|..-..-+..|||+.|++-..
T Consensus 153 t~s~~~------------~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~ 204 (334)
T 2p9w_A 153 AFALGM------------PAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG 204 (334)
T ss_dssp EEEESS------------CEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS
T ss_pred eCCCCC------------CeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC
Confidence 865321 0234667765422245433333333433334455789987777554
No 164
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=31.17 E-value=1.2e+02 Score=27.36 Aligned_cols=59 Identities=8% Similarity=0.020 Sum_probs=33.8
Q ss_pred ceEEeCC---CcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceE-EcCCCCCCCccceeeEEcCCCcEEEeCCC
Q 043381 69 EMLLLPT---GDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFS-ELTPTSKPRMCHSTSVVLPDGKILVAGSN 144 (286)
Q Consensus 69 ~~v~Lpd---G~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt-~~a~~~~~R~yHS~A~LLpDGrVlv~GG~ 144 (286)
+...-|| |+.+++|+.+. ...+||..+. +.. ..-.-.... -.+.+. - ||+.|+.|+.
T Consensus 200 ~~~~sp~~~~~~~l~s~~~d~-------------~i~vwd~~~~---~~~~~~~~~h~~~-v~~~~~-s-d~~~l~s~~~ 260 (450)
T 2vdu_B 200 DVHLIKDSDGHQFIITSDRDE-------------HIKISHYPQC---FIVDKWLFGHKHF-VSSICC-G-KDYLLLSAGG 260 (450)
T ss_dssp EEEEEECTTSCEEEEEEETTS-------------CEEEEEESCT---TCEEEECCCCSSC-EEEEEE-C-STTEEEEEES
T ss_pred EEEEcCCCCCCcEEEEEcCCC-------------cEEEEECCCC---ceeeeeecCCCCc-eEEEEE-C-CCCEEEEEeC
Confidence 4467789 99999988651 3568887765 322 111011111 122333 3 9999999885
Q ss_pred CC
Q 043381 145 PH 146 (286)
Q Consensus 145 ~~ 146 (286)
..
T Consensus 261 d~ 262 (450)
T 2vdu_B 261 DD 262 (450)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 165
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=30.97 E-value=65 Score=31.25 Aligned_cols=61 Identities=11% Similarity=0.089 Sum_probs=33.0
Q ss_pred ceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcC-CCcEEEeCCCCC
Q 043381 69 EMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLP-DGKILVAGSNPH 146 (286)
Q Consensus 69 ~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLp-DGrVlv~GG~~~ 146 (286)
+....|||+.+++++.+ | ...+||..++ |............-.....-| ||+.+++|+...
T Consensus 102 ~~~~s~~~~~l~~~~~d-g------------~i~vw~~~~~----~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg 163 (814)
T 3mkq_A 102 SIAVHPTKPYVLSGSDD-L------------TVKLWNWENN----WALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDR 163 (814)
T ss_dssp EEEECSSSSEEEEEETT-S------------EEEEEEGGGT----SEEEEEEECCSSCEEEEEEETTEEEEEEEEETTS
T ss_pred EEEEeCCCCEEEEEcCC-C------------EEEEEECCCC----ceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCC
Confidence 34677999999888754 1 3468887654 211111110111122334456 787888777443
No 166
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=30.77 E-value=58 Score=27.46 Aligned_cols=59 Identities=12% Similarity=0.148 Sum_probs=36.6
Q ss_pred ceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCCC
Q 043381 69 EMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNP 145 (286)
Q Consensus 69 ~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~ 145 (286)
+...-|||+.+++|+.+. ...+||..+. +.-..+... ...-.....-|||+.|++||..
T Consensus 278 ~~~~sp~~~~l~s~~~dg-------------~i~iwd~~~~--~~~~~~~~~---~~~v~~~~~s~~g~~l~~~s~d 336 (368)
T 3mmy_A 278 GIAFHPVHGTLATVGSDG-------------RFSFWDKDAR--TKLKTSEQL---DQPISACCFNHNGNIFAYASSY 336 (368)
T ss_dssp EEEECTTTCCEEEEETTS-------------CEEEEETTTT--EEEEECCCC---SSCEEEEEECTTSSCEEEEECC
T ss_pred EEEEecCCCEEEEEccCC-------------eEEEEECCCC--cEEEEecCC---CCCceEEEECCCCCeEEEEecc
Confidence 456789999999998651 3468987764 122222211 1112234557999999988754
No 167
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=30.01 E-value=2.4e+02 Score=25.23 Aligned_cols=59 Identities=14% Similarity=0.237 Sum_probs=39.1
Q ss_pred ceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCC
Q 043381 69 EMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSN 144 (286)
Q Consensus 69 ~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~ 144 (286)
....-|||+.+++.+...| .....+||..+. +...+.... .......-|||+.++.++.
T Consensus 315 ~~~~spdG~~l~~~~~~~g----------~~~i~~~d~~~~---~~~~l~~~~----~~~~~~~spdg~~l~~~s~ 373 (415)
T 2hqs_A 315 DADVSSDGKFMVMVSSNGG----------QQHIAKQDLATG---GVQVLSSTF----LDETPSLAPNGTMVIYSSS 373 (415)
T ss_dssp EEEECTTSSEEEEEEECSS----------CEEEEEEETTTC---CEEECCCSS----SCEEEEECTTSSEEEEEEE
T ss_pred CeEECCCCCEEEEEECcCC----------ceEEEEEECCCC---CEEEecCCC----CcCCeEEcCCCCEEEEEEc
Confidence 4466799998887775421 124568999887 776654432 2234566799998888774
No 168
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=29.04 E-value=1.3e+02 Score=26.17 Aligned_cols=62 Identities=13% Similarity=0.144 Sum_probs=38.5
Q ss_pred cccceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCC
Q 043381 66 VMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGS 143 (286)
Q Consensus 66 ~~~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG 143 (286)
.+-..+.+-+|++|+..|.. |. .+...+|+++. +-...- ..+..+.+..+.+-+++||++..
T Consensus 21 ~ftqGL~~~~~~LyestG~~-g~----------S~v~~vD~~tg---kv~~~~--~l~~~~fgeGi~~~~~~ly~ltw 82 (243)
T 3mbr_X 21 AFTEGLFYLRGHLYESTGET-GR----------SSVRKVDLETG---RILQRA--EVPPPYFGAGIVAWRDRLIQLTW 82 (243)
T ss_dssp CCEEEEEEETTEEEEEECCT-TS----------CEEEEEETTTC---CEEEEE--ECCTTCCEEEEEEETTEEEEEES
T ss_pred cccccEEEECCEEEEECCCC-CC----------ceEEEEECCCC---CEEEEE--eCCCCcceeEEEEeCCEEEEEEe
Confidence 33344666679999998854 21 14568999987 443322 33444555544444899999853
No 169
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=28.70 E-value=2.9e+02 Score=24.04 Aligned_cols=52 Identities=13% Similarity=0.176 Sum_probs=31.7
Q ss_pred CcEEEEEecCCCCCeEee-cCCCCccccceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCC
Q 043381 42 QDCGRIEITNKSATWQRE-MMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDP 109 (286)
Q Consensus 42 ~s~~~id~~~~~~~W~~~-~M~~~R~~~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~ 109 (286)
++..+||+.. .+=... +++. |.++..+.+-++++|+++-.+. ...+||+++.
T Consensus 44 s~v~~iD~~t--g~v~~~i~l~~-~~fgeGi~~~g~~lyv~t~~~~-------------~v~viD~~t~ 96 (266)
T 2iwa_A 44 SSVRQVALQT--GKVENIHKMDD-SYFGEGLTLLNEKLYQVVWLKN-------------IGFIYDRRTL 96 (266)
T ss_dssp CEEEEEETTT--CCEEEEEECCT-TCCEEEEEEETTEEEEEETTCS-------------EEEEEETTTT
T ss_pred CEEEEEECCC--CCEEEEEecCC-CcceEEEEEeCCEEEEEEecCC-------------EEEEEECCCC
Confidence 4567788753 443333 5543 5555556665779999865331 4578999875
No 170
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=28.51 E-value=71 Score=29.40 Aligned_cols=58 Identities=21% Similarity=0.332 Sum_probs=34.9
Q ss_pred eEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCCCC
Q 043381 70 MLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPH 146 (286)
Q Consensus 70 ~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~~ 146 (286)
...-|||+.+++|+.+. +..+||.... .-..+... ..+. ......|||+.|++|+...
T Consensus 22 ~a~spdg~~las~~~d~-------------~v~iWd~~~~---~~~~l~gh-~~~V--~~l~fspdg~~las~~~d~ 79 (577)
T 2ymu_A 22 VAFSPDGQTIASASDDK-------------TVKLWNRNGQ---LLQTLTGH-SSSV--WGVAFSPDGQTIASASDDK 79 (577)
T ss_dssp EEECTTSSCEEEEETTS-------------EEEEECTTSC---EEEEEECC-SSCE--EEEEECTTSSEEEEEETTS
T ss_pred EEECCCCCEEEEEeCCC-------------EEEEEECCCC---EEEEEeCC-CCCE--EEEEECCCCCEEEEEeCCC
Confidence 35679999999987541 3568995433 33333211 1111 1233579999999988644
No 171
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=28.43 E-value=2.3e+02 Score=24.42 Aligned_cols=91 Identities=3% Similarity=-0.065 Sum_probs=43.2
Q ss_pred CcEEEEEecCCCCCeEeecCCCCccccceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCC
Q 043381 42 QDCGRIEITNKSATWQREMMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTS 121 (286)
Q Consensus 42 ~s~~~id~~~~~~~W~~~~M~~~R~~~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~ 121 (286)
++..+||+.. .+.... ++....-+...+-|||++|++.-.......|.. ......++|+++. +....-...
T Consensus 152 ~~v~viD~~t--~~~~~~-i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~---~~~~v~~id~~t~---~v~~~~~~~ 222 (328)
T 3dsm_A 152 NRILKIDTET--DKVVDE-LTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGY---EAPSLYRIDAETF---TVEKQFKFK 222 (328)
T ss_dssp CEEEEEETTT--TEEEEE-EECSSCBCCCEECTTSEEEEEBCCBCTTCSSCB---CCCEEEEEETTTT---EEEEEEECC
T ss_pred CEEEEEECCC--CeEEEE-EEcCCCccceEEcCCCCEEEEECCCccCCcccc---CCceEEEEECCCC---eEEEEEecC
Confidence 4566788753 333222 111222245567799999998643311111110 0124568999987 654321221
Q ss_pred CCCccceeeEEcCCC-cEEEeC
Q 043381 122 KPRMCHSTSVVLPDG-KILVAG 142 (286)
Q Consensus 122 ~~R~yHS~A~LLpDG-rVlv~G 142 (286)
....-++ ..+-||| ++|++.
T Consensus 223 ~g~~p~~-la~~~d~~~lyv~~ 243 (328)
T 3dsm_A 223 LGDWPSE-VQLNGTRDTLYWIN 243 (328)
T ss_dssp TTCCCEE-EEECTTSCEEEEES
T ss_pred CCCCcee-EEEecCCCEEEEEc
Confidence 1222223 3345555 455653
No 172
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=28.42 E-value=1.1e+02 Score=31.53 Aligned_cols=58 Identities=19% Similarity=0.186 Sum_probs=33.6
Q ss_pred ceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCCCC
Q 043381 69 EMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPH 146 (286)
Q Consensus 69 ~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~~ 146 (286)
+...-|||+.++++| | ...+||..+. +....-....... .....-|||+.+++|+...
T Consensus 1183 ~l~fs~dg~~l~s~~---g------------~v~vwd~~~g---~~~~~~~~~~~~i--~~~~~s~dg~~l~~~~~dg 1240 (1249)
T 3sfz_A 1183 DVCFSPDSKTLVSAG---G------------YLKWWNVATG---DSSQTFYTNGTNL--KKIHVSPDFRTYVTVDNLG 1240 (1249)
T ss_dssp EEEECTTSSCEEEES---S------------SEEEBCSSSC---BCCCCCCCSSCCC--CCCEECSSSCCEEEECTTC
T ss_pred EEEECCCCCEEEECC---C------------eEEEEECCCC---ceeeeeeccCCcc--cEEEECCCCCEEEEecCCc
Confidence 346779999999876 1 2468887765 2211111111111 1244568999999887543
No 173
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=28.40 E-value=1.9e+02 Score=28.05 Aligned_cols=82 Identities=16% Similarity=0.164 Sum_probs=41.2
Q ss_pred CcEEEEEecCCCCCeEee-cCCCCccccceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCC
Q 043381 42 QDCGRIEITNKSATWQRE-MMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPT 120 (286)
Q Consensus 42 ~s~~~id~~~~~~~W~~~-~M~~~R~~~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~ 120 (286)
.+..+||+.. .+.. .++....-|..++-|||+-+.+++.+ + ...+||..+..++.-..+..-
T Consensus 177 ~~V~viD~~t----~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~d-g------------~V~viD~~~~t~~~v~~i~~G 239 (567)
T 1qks_A 177 GQIALIDGST----YEIKTVLDTGYAVHISRLSASGRYLFVIGRD-G------------KVNMIDLWMKEPTTVAEIKIG 239 (567)
T ss_dssp TEEEEEETTT----CCEEEEEECSSCEEEEEECTTSCEEEEEETT-S------------EEEEEETTSSSCCEEEEEECC
T ss_pred CeEEEEECCC----CeEEEEEeCCCCccceEECCCCCEEEEEcCC-C------------eEEEEECCCCCCcEeEEEecC
Confidence 4566788643 2222 33334344566888999865555422 1 356899863211111222222
Q ss_pred CCCCccceeeEEc---CCCcEEEeCC
Q 043381 121 SKPRMCHSTSVVL---PDGKILVAGS 143 (286)
Q Consensus 121 ~~~R~yHS~A~LL---pDGrVlv~GG 143 (286)
.-|| +.++-- |||+.+.++.
T Consensus 240 ~~P~---~ia~s~~~~pDGk~l~v~n 262 (567)
T 1qks_A 240 SEAR---SIETSKMEGWEDKYAIAGA 262 (567)
T ss_dssp SEEE---EEEECCSTTCTTTEEEEEE
T ss_pred CCCc---eeEEccccCCCCCEEEEEE
Confidence 2222 344422 6997666654
No 174
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=28.34 E-value=1.5e+02 Score=25.69 Aligned_cols=58 Identities=10% Similarity=0.130 Sum_probs=35.4
Q ss_pred eEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeE-EcCCCcEEEeCCCC
Q 043381 70 MLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSV-VLPDGKILVAGSNP 145 (286)
Q Consensus 70 ~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~-LLpDGrVlv~GG~~ 145 (286)
+++=+||++|+..-.. ....+|||++. ++..+... ++..+-.++ +-+||++||+....
T Consensus 253 ia~d~~G~l~va~~~~-------------~~V~~~d~~~G---~~~~~~~~--~~~~~p~~va~~~~g~l~v~~~~~ 311 (343)
T 2qe8_A 253 ISIDKDHNIYVGDLAH-------------SAIGVITSADR---AYKLLVTD--EKLSWTDSFNFGSDGYLYFDCNQL 311 (343)
T ss_dssp EEECTTCCEEEEEGGG-------------TEEEEEETTTT---EEEEEEEC--GGGSCEEEEEECTTSCEEEEECCG
T ss_pred EEECCCCCEEEEccCC-------------CeEEEEECCCC---CEEEEEEC--CceecCCeeEECCCCcEEEEeCcc
Confidence 3455788888875432 13569999555 66655432 233333333 34899999998744
No 175
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=28.11 E-value=2.6e+02 Score=23.22 Aligned_cols=79 Identities=10% Similarity=0.036 Sum_probs=42.5
Q ss_pred cEEEEEecCCCCCeEee-cCCCCccccceEEeCCCc-EEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCce--EEcC
Q 043381 43 DCGRIEITNKSATWQRE-MMPSPRVMGEMLLLPTGD-VLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERF--SELT 118 (286)
Q Consensus 43 s~~~id~~~~~~~W~~~-~M~~~R~~~~~v~LpdG~-VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~w--t~~a 118 (286)
...++|+.. .+.... .....-. ...+-|||+ +|+++.... ...+||+.+. +. ..+.
T Consensus 21 ~v~~~d~~~--~~~~~~~~~~~~~~--~~~~s~dg~~l~~~~~~~~-------------~i~~~d~~~~---~~~~~~~~ 80 (331)
T 3u4y_A 21 RISFFSTDT--LEILNQITLGYDFV--DTAITSDCSNVVVTSDFCQ-------------TLVQIETQLE---PPKVVAIQ 80 (331)
T ss_dssp EEEEEETTT--CCEEEEEECCCCEE--EEEECSSSCEEEEEESTTC-------------EEEEEECSSS---SCEEEEEE
T ss_pred eEEEEeCcc--cceeeeEEccCCcc--eEEEcCCCCEEEEEeCCCC-------------eEEEEECCCC---ceeEEecc
Confidence 556778753 444433 4332222 556779998 666554220 4568999877 43 2222
Q ss_pred CCCCCCccceeeEEcCCCcEEEeCCC
Q 043381 119 PTSKPRMCHSTSVVLPDGKILVAGSN 144 (286)
Q Consensus 119 ~~~~~R~yHS~A~LLpDGrVlv~GG~ 144 (286)
....++ + ...+-|||+.++++..
T Consensus 81 ~~~~~~--~-~~~~s~dg~~l~~~~~ 103 (331)
T 3u4y_A 81 EGQSSM--A-DVDITPDDQFAVTVTG 103 (331)
T ss_dssp ECSSCC--C-CEEECTTSSEEEECCC
T ss_pred cCCCCc--c-ceEECCCCCEEEEecC
Confidence 222222 2 1455789987665443
No 176
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=27.32 E-value=87 Score=27.12 Aligned_cols=63 Identities=10% Similarity=0.050 Sum_probs=37.7
Q ss_pred cceEEeCCC-cEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcC-CCcEEEeCCCC
Q 043381 68 GEMLLLPTG-DVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLP-DGKILVAGSNP 145 (286)
Q Consensus 68 ~~~v~LpdG-~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLp-DGrVlv~GG~~ 145 (286)
.+....||| +.+++|+.+. ...+||..+. +....-...--...-......| |++.+++|+..
T Consensus 77 ~~~~~~~~~~~~l~s~~~dg-------------~i~iwd~~~~---~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d 140 (383)
T 3ei3_B 77 TSLEWHPTHPTTVAVGSKGG-------------DIILWDYDVQ---NKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR 140 (383)
T ss_dssp EEEEECSSCTTEEEEEEBTS-------------CEEEEETTST---TCEEEECCCSTTCBEEEEEEETTEEEEEEEEETT
T ss_pred EEEEECCCCCCEEEEEcCCC-------------eEEEEeCCCc---ccceeeecCCcCCceeEEEeCCCCCCEEEEEeCC
Confidence 345678999 8999988651 3579998876 5443322111111122344557 77888888754
Q ss_pred C
Q 043381 146 H 146 (286)
Q Consensus 146 ~ 146 (286)
.
T Consensus 141 ~ 141 (383)
T 3ei3_B 141 G 141 (383)
T ss_dssp T
T ss_pred C
Confidence 4
No 177
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=27.30 E-value=47 Score=31.73 Aligned_cols=59 Identities=15% Similarity=0.215 Sum_probs=35.2
Q ss_pred eEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCCC
Q 043381 70 MLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNP 145 (286)
Q Consensus 70 ~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~ 145 (286)
...-|||+.+++|+.+. +..+||-... ++........ ...-.....-|||+.|++|+..
T Consensus 454 va~spdg~~lasgs~D~-------------~v~lwd~~~~---~~~~~~~~~h-~~~v~~v~fspdg~~las~s~d 512 (611)
T 1nr0_A 454 VALSNDKQFVAVGGQDS-------------KVHVYKLSGA---SVSEVKTIVH-PAEITSVAFSNNGAFLVATDQS 512 (611)
T ss_dssp EEECTTSCEEEEEETTS-------------EEEEEEEETT---EEEEEEEEEC-SSCEEEEEECTTSSEEEEEETT
T ss_pred EEEeCCCCEEEEeCCCC-------------eEEEEEccCC---ceeeeeccCC-CCceEEEEECCCCCEEEEEcCC
Confidence 34568899888888651 3568887665 5432211101 1111234557999999998853
No 178
>2vsd_A CHIR AB1; immune system receptor, FC receptor; HET: NAG NDG MAN; 1.82A {Gallus gallus}
Probab=27.20 E-value=1.7e+02 Score=20.86 Aligned_cols=39 Identities=15% Similarity=0.163 Sum_probs=28.2
Q ss_pred CCCceeecCCCc-eeecCCEEEEEEEecccccccCcEEEEEEcCCcc
Q 043381 178 YRPSIVSKFKGK-MVKYGQNFVIQFKLDELEVSLNDLKVTMYAPPFT 223 (286)
Q Consensus 178 ~RP~i~~~~~p~-~~~~g~~~~v~~~~~~~~~~~~~~~v~L~~~~~~ 223 (286)
.+|+|... |. .+..|++++++=.... ....+.+.+.+..
T Consensus 4 ~kP~i~~~--p~~~v~~G~~VtL~C~~~~-----~~~~~~w~k~g~~ 43 (105)
T 2vsd_A 4 PQPSLSLH--PSQGVSLGDTVTLRCHLPR-----MAAWVQLWLNGTL 43 (105)
T ss_dssp CCCEEEEE--SCSSCCTTCEEEEEEECCS-----SCEEEEEEETTEE
T ss_pred CCCEEEeC--CCCCcCcCCCEEEEEEcCC-----CCcEEEEEECCcc
Confidence 58999876 54 6899999999876432 2456777777643
No 179
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=26.94 E-value=92 Score=27.59 Aligned_cols=68 Identities=10% Similarity=0.047 Sum_probs=41.7
Q ss_pred cCCC-CccccceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcE
Q 043381 60 MMPS-PRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKI 138 (286)
Q Consensus 60 ~M~~-~R~~~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrV 138 (286)
..|. +|.+-..+..-||++|+..|.. |. .+...+|+++. +-...-+ .+..+.+..+.+-+++|
T Consensus 36 ~~phd~~~ftqGL~~~~~~LyestG~~-g~----------S~v~~vD~~Tg---kv~~~~~--l~~~~FgeGit~~g~~l 99 (262)
T 3nol_A 36 SYPHDTKAFTEGFFYRNGYFYESTGLN-GR----------SSIRKVDIESG---KTLQQIE--LGKRYFGEGISDWKDKI 99 (262)
T ss_dssp EEECCTTCEEEEEEEETTEEEEEEEET-TE----------EEEEEECTTTC---CEEEEEE--CCTTCCEEEEEEETTEE
T ss_pred EecCCCCcccceEEEECCEEEEECCCC-CC----------ceEEEEECCCC---cEEEEEe--cCCccceeEEEEeCCEE
Confidence 4444 3555556666699999998854 21 13468999987 5433222 34455554444447899
Q ss_pred EEeCC
Q 043381 139 LVAGS 143 (286)
Q Consensus 139 lv~GG 143 (286)
|++-.
T Consensus 100 y~ltw 104 (262)
T 3nol_A 100 VGLTW 104 (262)
T ss_dssp EEEES
T ss_pred EEEEe
Confidence 99854
No 180
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=26.75 E-value=2.4e+02 Score=25.00 Aligned_cols=28 Identities=7% Similarity=0.158 Sum_probs=20.5
Q ss_pred cceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCC
Q 043381 68 GEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDP 109 (286)
Q Consensus 68 ~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~ 109 (286)
.....-+||+++++|+ + | ...+||-.+.
T Consensus 395 ~~~~~~~~~~~l~~~~-d-g------------~i~iwd~~~g 422 (464)
T 3v7d_B 395 AITTFYVSDNILVSGS-E-N------------QFNIYNLRSG 422 (464)
T ss_dssp CEEEEEECSSEEEEEE-T-T------------EEEEEETTTC
T ss_pred cEEEEEeCCCEEEEec-C-C------------eEEEEECCCC
Confidence 3446778999999887 3 1 3579998887
No 181
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=26.60 E-value=2.4e+02 Score=26.66 Aligned_cols=86 Identities=8% Similarity=0.099 Sum_probs=45.4
Q ss_pred CcEEEEEecCCCCCeEeecCCCCccccceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEE-cCCC
Q 043381 42 QDCGRIEITNKSATWQREMMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSE-LTPT 120 (286)
Q Consensus 42 ~s~~~id~~~~~~~W~~~~M~~~R~~~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~-~a~~ 120 (286)
.....+|..+..... ...++..+.-++...-|||+-|++..... .+..+||..+. +-.. +.--
T Consensus 302 g~i~vvd~~~~~~l~-~~~i~~~~~~~~~~~spdg~~l~va~~~~------------~~v~v~D~~tg---~l~~~i~~g 365 (543)
T 1nir_A 302 GKVLLVNYKDIDNLT-VTSIGAAPFLHDGGWDSSHRYFMTAANNS------------NKVAVIDSKDR---RLSALVDVG 365 (543)
T ss_dssp TEEEEEECTTSSSCE-EEEEECCSSCCCEEECTTSCEEEEEEGGG------------TEEEEEETTTT---EEEEEEECS
T ss_pred CeEEEEEecCCCcce-eEEeccCcCccCceECCCCCEEEEEecCC------------CeEEEEECCCC---eEEEeeccC
Confidence 345566665422222 11233456666778889999555443221 13467999887 5432 2212
Q ss_pred CCCCccceeeEEcCC-CcEEEeCC
Q 043381 121 SKPRMCHSTSVVLPD-GKILVAGS 143 (286)
Q Consensus 121 ~~~R~yHS~A~LLpD-GrVlv~GG 143 (286)
..|+...+.++.-|| |++|+++.
T Consensus 366 ~~ph~g~g~~~~~p~~g~~~~s~~ 389 (543)
T 1nir_A 366 KTPHPGRGANFVHPKYGPVWSTSH 389 (543)
T ss_dssp SSBCCTTCEEEEETTTEEEEEEEB
T ss_pred CCCCCCCCcccCCCCCccEEEecc
Confidence 223322234444576 88888864
No 182
>3kgr_A LAIR-1, hlair1, leukocyte-associated immunoglobulin-like receptor; IG-like domain, cell membrane, glycoprotein; 1.80A {Homo sapiens} PDB: 3rp1_A
Probab=25.87 E-value=1.2e+02 Score=21.88 Aligned_cols=40 Identities=15% Similarity=0.151 Sum_probs=30.1
Q ss_pred CCCceeecCCC-ceeecCCEEEEEEEecccccccCcEEEEEEcCCccc
Q 043381 178 YRPSIVSKFKG-KMVKYGQNFVIQFKLDELEVSLNDLKVTMYAPPFTT 224 (286)
Q Consensus 178 ~RP~i~~~~~p-~~~~~g~~~~v~~~~~~~~~~~~~~~v~L~~~~~~T 224 (286)
.||.|... | ..|..|+.++|+-.... ...++.|.+-+...
T Consensus 8 pkPsL~a~--P~~vv~~G~~VtL~C~~~~-----~~~~f~l~k~g~~~ 48 (106)
T 3kgr_A 8 PRPSISAE--PGTVIPLGSHVTFVCRGPV-----GVQTFRLERESRST 48 (106)
T ss_dssp CCCEEEEE--SCSEEETTCCEEEEEEECT-----TCCEEEEEEGGGTE
T ss_pred CCCEEEEe--CCCccCCCCeEEEEEEccC-----CCcEEEEEECCCcc
Confidence 69999887 5 46889999999876543 34578888887654
No 183
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=25.67 E-value=3.1e+02 Score=26.78 Aligned_cols=86 Identities=9% Similarity=0.156 Sum_probs=44.2
Q ss_pred cEEEEEecCCCCCeEee-cCCCCcc-------ccceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCce
Q 043381 43 DCGRIEITNKSATWQRE-MMPSPRV-------MGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERF 114 (286)
Q Consensus 43 s~~~id~~~~~~~W~~~-~M~~~R~-------~~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~w 114 (286)
....+|+.+....|+.. ..+.... ....+.+-+|+||+... + | ....+|.++.. ..|
T Consensus 77 ~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-d-g------------~l~alD~~tG~-~~W 141 (668)
T 1kv9_A 77 RVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL-D-G------------RLIALDAKTGK-AIW 141 (668)
T ss_dssp EEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT-T-S------------EEEEEETTTCC-EEE
T ss_pred eEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC-C-C------------EEEEEECCCCC-Eee
Confidence 34557776666789976 3321110 01223455888887532 1 1 23578887652 268
Q ss_pred EEcCCCCCCCccceeeEEcCCCcEEEeCC
Q 043381 115 SELTPTSKPRMCHSTSVVLPDGKILVAGS 143 (286)
Q Consensus 115 t~~a~~~~~R~yHS~A~LLpDGrVlv~GG 143 (286)
+.-..-......+..+-++-+|+||+..+
T Consensus 142 ~~~~~~~~~~~~~~~~P~v~~~~v~vg~~ 170 (668)
T 1kv9_A 142 SQQTTDPAKPYSITGAPRVVKGKVIIGNG 170 (668)
T ss_dssp EEECSCTTSSCBCCSCCEEETTEEEECCB
T ss_pred eeccCCCCCcceecCCCEEECCEEEEeCC
Confidence 75332111112222333445899988654
No 184
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=25.55 E-value=1.2e+02 Score=26.42 Aligned_cols=60 Identities=15% Similarity=0.069 Sum_probs=36.0
Q ss_pred eEEeCCCcEEEEcCccCCCCCccCCCCCCCc-cEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCCC
Q 043381 70 MLLLPTGDVLIINGAKKGTAGWNFATDPNTT-PVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNP 145 (286)
Q Consensus 70 ~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~-~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~ 145 (286)
...-|||+.+++|+.+. + ..+||..+. +.-..+..-.....-. ....-|||+.|++|+..
T Consensus 201 ~~~s~~g~~l~s~s~d~-------------~~v~iwd~~~~--~~~~~~~~g~h~~~v~-~~~~s~~~~~l~s~s~d 261 (355)
T 3vu4_A 201 VRLNRKSDMVATCSQDG-------------TIIRVFKTEDG--VLVREFRRGLDRADVV-DMKWSTDGSKLAVVSDK 261 (355)
T ss_dssp EEECTTSSEEEEEETTC-------------SEEEEEETTTC--CEEEEEECTTCCSCEE-EEEECTTSCEEEEEETT
T ss_pred EEECCCCCEEEEEeCCC-------------CEEEEEECCCC--cEEEEEEcCCCCCcEE-EEEECCCCCEEEEEECC
Confidence 45679999999998762 3 568998765 1222221000111111 24457899999999854
No 185
>3sil_A Sialidase; glycosidase, hydrolase; HET: PO4 GOL; 1.05A {Salmonella typhimurium} SCOP: b.68.1.1 PDB: 1dim_A* 1dil_A* 2sil_A 2sim_A*
Probab=25.48 E-value=81 Score=29.28 Aligned_cols=69 Identities=13% Similarity=0.103 Sum_probs=42.8
Q ss_pred cceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCC
Q 043381 68 GEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSN 144 (286)
Q Consensus 68 ~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~ 144 (286)
+..+.|.||++++---+..... .........+|.. + |++|+.-..+......+...+-+ ||++|..--.
T Consensus 176 G~GI~l~~G~Lv~P~~~~~~~~----~~~~~~s~~iyS~--D-G~tW~~~~~~~~~~~~ep~vvE~-dG~L~m~~R~ 244 (379)
T 3sil_A 176 GSGLQLNDGKLVFPVQMVRTKN----ITTVLNTSFIYST--D-GITWSLPSGYCEGFGSENNIIEF-NASLVNNIRN 244 (379)
T ss_dssp EECEECTTSCEEEEEEEEECTT----SSCSEEEEEEEES--S-SSSEECCSCCEECTTCCEEEEEE-TTEEEEEECC
T ss_pred CceEEEcCCcEEEEEEEeeccC----CCCCEEEEEEEcC--C-CCCeEECCCCCCccCCCCEEEEE-CCEEEEEEEe
Confidence 3468899999876432211100 0011224568864 4 77999877766555667667777 9999988654
No 186
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=25.31 E-value=3e+02 Score=23.70 Aligned_cols=80 Identities=15% Similarity=0.218 Sum_probs=39.1
Q ss_pred cEEEEEecCCCCCeEeecCCCCccccceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCC
Q 043381 43 DCGRIEITNKSATWQREMMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSK 122 (286)
Q Consensus 43 s~~~id~~~~~~~W~~~~M~~~R~~~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~ 122 (286)
....+|+.+....|+...+.. +.... .++.+|+||+... + | ...+||+.+.. ..|+.-.. -
T Consensus 288 ~l~~~d~~tG~~~w~~~~~~~-~~~~~-~~~~~~~l~v~~~-~-g------------~l~~~d~~tG~-~~~~~~~~--~ 348 (376)
T 3q7m_A 288 RVMALTIDGGVTLWTQSDLLH-RLLTS-PVLYNGNLVVGDS-E-G------------YLHWINVEDGR-FVAQQKVD--S 348 (376)
T ss_dssp CEEEEETTTCCEEEEECTTTT-SCCCC-CEEETTEEEEECT-T-S------------EEEEEETTTCC-EEEEEECC--T
T ss_pred eEEEEECCCCcEEEeecccCC-CcccC-CEEECCEEEEEeC-C-C------------eEEEEECCCCc-EEEEEecC--C
Confidence 344566554445677653332 22233 2334777776432 1 1 23588988761 14543221 1
Q ss_pred CCccceeeEEcCCCcEEEeCC
Q 043381 123 PRMCHSTSVVLPDGKILVAGS 143 (286)
Q Consensus 123 ~R~yHS~A~LLpDGrVlv~GG 143 (286)
..... +....+|+||+...
T Consensus 349 ~~~~~--~~~~~~~~l~v~~~ 367 (376)
T 3q7m_A 349 SGFQT--EPVAADGKLLIQAK 367 (376)
T ss_dssp TCBCS--CCEEETTEEEEEBT
T ss_pred Cccee--CCEEECCEEEEEeC
Confidence 11222 22234899988754
No 187
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=24.62 E-value=1.9e+02 Score=23.61 Aligned_cols=83 Identities=12% Similarity=0.155 Sum_probs=45.4
Q ss_pred CcEEEEEecCCCCCeEee-cCCCC-ccccceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCC
Q 043381 42 QDCGRIEITNKSATWQRE-MMPSP-RVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTP 119 (286)
Q Consensus 42 ~s~~~id~~~~~~~W~~~-~M~~~-R~~~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~ 119 (286)
++..++|+.. .+-... .+... ..-.+....|||+.+++|+.+. +..+||.++. +-...-.
T Consensus 45 ~tV~iWd~~t--g~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg-------------~v~iw~~~~~---~~~~~~~ 106 (318)
T 4ggc_A 45 NSVYLWSASS--GDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSA-------------EVQLWDVQQQ---KRLRNMT 106 (318)
T ss_dssp TEEEEEETTT--CCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTS-------------EEEEEETTTT---EEEEEEE
T ss_pred CEEEEEECCC--CCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCC-------------cEEEeecCCc---eeEEEec
Confidence 3455677653 333322 33222 2223446789999999998762 3568988876 3322111
Q ss_pred CCCCCccceeeEEcCCCcEEEeCCCCC
Q 043381 120 TSKPRMCHSTSVVLPDGKILVAGSNPH 146 (286)
Q Consensus 120 ~~~~R~yHS~A~LLpDGrVlv~GG~~~ 146 (286)
....+ ...+-++++++++|+...
T Consensus 107 ~h~~~----~~~~~~~~~~l~s~~~~~ 129 (318)
T 4ggc_A 107 SHSAR----VGSLSWNSYILSSGSRSG 129 (318)
T ss_dssp CCSSC----EEEEEEETTEEEEEETTS
T ss_pred Cccce----EEEeecCCCEEEEEecCC
Confidence 11111 223345788888887554
No 188
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=24.39 E-value=80 Score=25.99 Aligned_cols=63 Identities=6% Similarity=0.010 Sum_probs=34.5
Q ss_pred eEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcC--CCcEEEeCCCCC
Q 043381 70 MLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLP--DGKILVAGSNPH 146 (286)
Q Consensus 70 ~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLp--DGrVlv~GG~~~ 146 (286)
...-|||+.+++|+.+. ...+||-.+... .|+......--...-......| |++.+++|+...
T Consensus 17 ~~~~~~~~~l~~~~~dg-------------~i~iw~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg 81 (351)
T 3f3f_A 17 VVYDFYGRHVATCSSDQ-------------HIKVFKLDKDTS-NWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDK 81 (351)
T ss_dssp EEECSSSSEEEEEETTS-------------EEEEEEECSSSC-CEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred EEEcCCCCEEEEeeCCC-------------eEEEEECCCCCC-cceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCC
Confidence 45568999999988651 346888775421 3333222111111111233345 688888888543
No 189
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=24.06 E-value=1.8e+02 Score=29.60 Aligned_cols=17 Identities=6% Similarity=-0.029 Sum_probs=13.9
Q ss_pred ceEEeCCCcEEEEcCcc
Q 043381 69 EMLLLPTGDVLIINGAK 85 (286)
Q Consensus 69 ~~v~LpdG~VlvvGG~~ 85 (286)
+...-|||+.|++|+.+
T Consensus 493 svafspdg~~LAsgs~D 509 (902)
T 2oaj_A 493 KISFAAETLELAVSIET 509 (902)
T ss_dssp EEEEETTTTEEEEEETT
T ss_pred EEEecCCCCeEEEEecC
Confidence 34677999999999976
No 190
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=23.47 E-value=1.4e+02 Score=23.91 Aligned_cols=82 Identities=12% Similarity=0.153 Sum_probs=46.2
Q ss_pred CcEEEEEecCCCCCeEeecCCCCccccceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCC-CCCCceEEcCCC
Q 043381 42 QDCGRIEITNKSATWQREMMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPND-PINERFSELTPT 120 (286)
Q Consensus 42 ~s~~~id~~~~~~~W~~~~M~~~R~~~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t-~~g~~wt~~a~~ 120 (286)
.+..++|+.. ...... ........+...-|||+.+++++.. ...+||..+ . +...+...
T Consensus 22 ~~i~~~d~~~--~~~~~~-~~~~~~v~~~~~spdg~~l~~~~~~--------------~i~~~d~~~~~---~~~~~~~~ 81 (297)
T 2ojh_A 22 SSIEIFNIRT--RKMRVV-WQTPELFEAPNWSPDGKYLLLNSEG--------------LLYRLSLAGDP---SPEKVDTG 81 (297)
T ss_dssp EEEEEEETTT--TEEEEE-EEESSCCEEEEECTTSSEEEEEETT--------------EEEEEESSSCC---SCEECCCT
T ss_pred eeEEEEeCCC--Cceeee-ccCCcceEeeEECCCCCEEEEEcCC--------------eEEEEeCCCCC---CceEeccc
Confidence 3455667653 333322 1112233455778999998886421 346899887 6 55554433
Q ss_pred CCCCccceeeEEcCCCcEEEeCCC
Q 043381 121 SKPRMCHSTSVVLPDGKILVAGSN 144 (286)
Q Consensus 121 ~~~R~yHS~A~LLpDGrVlv~GG~ 144 (286)
....... ....-|||+.++.++.
T Consensus 82 ~~~~~~~-~~~~spdg~~l~~~~~ 104 (297)
T 2ojh_A 82 FATICNN-DHGISPDGALYAISDK 104 (297)
T ss_dssp TCCCBCS-CCEECTTSSEEEEEEC
T ss_pred ccccccc-ceEECCCCCEEEEEEe
Confidence 2212222 3556789998888774
No 191
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=23.27 E-value=1.4e+02 Score=25.58 Aligned_cols=60 Identities=15% Similarity=0.168 Sum_probs=33.1
Q ss_pred cceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeC
Q 043381 68 GEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAG 142 (286)
Q Consensus 68 ~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~G 142 (286)
+...+-+||++||+.....+ .....||+.+. +++.+......|.-++.+. .+++++|++-
T Consensus 75 ~gia~~~dG~l~vad~~~~~-----------~~v~~~d~~~g---~~~~~~~~~~~~~~~g~~~-~~~~~~~v~d 134 (306)
T 2p4o_A 75 SGLAFTSNGDLVATGWNADS-----------IPVVSLVKSDG---TVETLLTLPDAIFLNGITP-LSDTQYLTAD 134 (306)
T ss_dssp EEEEECTTSCEEEEEECTTS-----------CEEEEEECTTS---CEEEEEECTTCSCEEEEEE-SSSSEEEEEE
T ss_pred eeEEEcCCCcEEEEeccCCc-----------ceEEEEcCCCC---eEEEEEeCCCccccCcccc-cCCCcEEEEE
Confidence 44567789999997642210 01345777776 6665544333444444443 4556666653
No 192
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=23.06 E-value=2.6e+02 Score=24.72 Aligned_cols=50 Identities=14% Similarity=0.279 Sum_probs=29.1
Q ss_pred CCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceE-EcCCCCCCCccceeeEEcCCCcEEEeCCCC
Q 043381 75 TGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFS-ELTPTSKPRMCHSTSVVLPDGKILVAGSNP 145 (286)
Q Consensus 75 dG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt-~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~ 145 (286)
||+.+++|+.+. ...+||..+. +-. .+... . .....+-.+++.+++|+..
T Consensus 265 ~~~~l~s~~~dg-------------~i~vwd~~~~---~~~~~~~~~-~----~~v~~~~~~~~~l~~g~~d 315 (435)
T 1p22_A 265 DDKYIVSASGDR-------------TIKVWNTSTC---EFVRTLNGH-K----RGIACLQYRDRLVVSGSSD 315 (435)
T ss_dssp ETTEEEEEETTS-------------EEEEEETTTC---CEEEEEECC-S----SCEEEEEEETTEEEEEETT
T ss_pred CCCEEEEEeCCC-------------eEEEEECCcC---cEEEEEcCC-C----CcEEEEEeCCCEEEEEeCC
Confidence 899999888651 3468998775 322 22111 0 1123333478888888753
No 193
>3eja_A Protein GH61E; beta sandwich, fibronectin type III fold, metal site, magnes unknown function; HET: NAG; 1.90A {Thielavia terrestris} PDB: 3eii_A*
Probab=22.96 E-value=3.5e+02 Score=23.02 Aligned_cols=80 Identities=15% Similarity=0.099 Sum_probs=42.9
Q ss_pred ceeecCCEEEEEEEecccccccCcEEEEEEcCCc--cccccC-CCcceEEecceeeeec--C----CceEEEEEEcCCCC
Q 043381 189 KMVKYGQNFVIQFKLDELEVSLNDLKVTMYAPPF--TTHGVS-MGQRLLVLATKELIDV--G----SGIFQVSVTAPPTA 259 (286)
Q Consensus 189 ~~~~~g~~~~v~~~~~~~~~~~~~~~v~L~~~~~--~THs~n-~~QR~v~L~~~~~~~~--g----~~~~~~~v~~P~~~ 259 (286)
.+|+.|++++++.+.... -.+-+.+=|-+-.. .--+++ .+.+-..+.-...... + ....+.++++|++
T Consensus 50 ~~V~AG~~v~~~~~~~~~--H~GPv~~Ylak~~~~~~~~~~dgsg~~WFKI~e~g~~~~~~~~W~~~~~~~~~~~iP~~- 126 (208)
T 3eja_A 50 LNTTAGSTVTYWANPDVY--HPGPVQFYMARVPDGEDINSWNGDGAVWFKVYEDHPTFGAQLTWPSTGKSSFAVPIPPC- 126 (208)
T ss_dssp EEEETTCEEEEEEESCCC--SSSCEEEEEEECCTTSCTTTCCCCSSCBEEEEECCCBCSSSCBCTTTTCCEEEEECCSS-
T ss_pred EEECCCCEEEEEEecCCC--CCCceEEEEeeCCCCccccccCCCCCcEEEEeeeccCCCCcceeeccCCCceEEeccCC-
Confidence 468999999988763211 13455666665443 111122 2333333322111000 0 0124678999976
Q ss_pred CcCCCcceEE----EEEc
Q 043381 260 KIAPPSFYLL----FVVY 273 (286)
Q Consensus 260 ~vappG~YmL----Fv~~ 273 (286)
+|||.|+| ++++
T Consensus 127 --l~~G~YllR~E~ialh 142 (208)
T 3eja_A 127 --IKSGYYLLRAEQIGLH 142 (208)
T ss_dssp --BCSEEEEEEEEEEECT
T ss_pred --CCCcceEEEeeeeeec
Confidence 78999997 5665
No 194
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=22.21 E-value=62 Score=32.20 Aligned_cols=58 Identities=14% Similarity=0.178 Sum_probs=38.5
Q ss_pred EEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEcC-CC-CCCCccceeeEEcCCCcEEEeCCCCC
Q 043381 71 LLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSELT-PT-SKPRMCHSTSVVLPDGKILVAGSNPH 146 (286)
Q Consensus 71 v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~a-~~-~~~R~yHS~A~LLpDGrVlv~GG~~~ 146 (286)
.--|||+.+++++.+. +..+||- .. .+..+. .+ ...|.+|+.|. =|||+.|++||.+.
T Consensus 92 awSPdG~~LAs~s~dg-------------~V~iwd~-~~---~l~~l~~~~~~~~~sv~svaf-SPDG~~LAsgs~DG 151 (588)
T 2j04_A 92 KPSPIDDWMAVLSNNG-------------NVSVFKD-NK---MLTNLDSKGNLSSRTYHCFEW-NPIESSIVVGNEDG 151 (588)
T ss_dssp EECSSSSCEEEEETTS-------------CEEEEET-TE---EEEECCCSSCSTTTCEEEEEE-CSSSSCEEEEETTS
T ss_pred EECCCCCEEEEEeCCC-------------cEEEEeC-Cc---eeeeccCCCccccccEEEEEE-cCCCCEEEEEcCCC
Confidence 4568999999888661 3567872 22 555544 11 12456887665 68999999998633
No 195
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=21.75 E-value=4.3e+02 Score=25.91 Aligned_cols=86 Identities=12% Similarity=0.143 Sum_probs=44.2
Q ss_pred cEEEEEecCCCCCeEee-cCCCCc-------cccceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCce
Q 043381 43 DCGRIEITNKSATWQRE-MMPSPR-------VMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERF 114 (286)
Q Consensus 43 s~~~id~~~~~~~W~~~-~M~~~R-------~~~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~w 114 (286)
...-+|+.+....|+.. .....- ....++.+-+|+||+... + | ....+|.++.. ..|
T Consensus 81 ~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~-d-g------------~l~AlDa~TG~-~~W 145 (689)
T 1yiq_A 81 VVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL-D-G------------RLEAIDAKTGQ-RAW 145 (689)
T ss_dssp CEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-T-S------------EEEEEETTTCC-EEE
T ss_pred eEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc-C-C------------EEEEEECCCCC-Eee
Confidence 45567877666789976 332110 011224455888887542 1 1 23578887651 268
Q ss_pred EEcCCCCCCC-ccceeeEEcCCCcEEEeCC
Q 043381 115 SELTPTSKPR-MCHSTSVVLPDGKILVAGS 143 (286)
Q Consensus 115 t~~a~~~~~R-~yHS~A~LLpDGrVlv~GG 143 (286)
+.-......+ ..+..+-++-+|+|++..+
T Consensus 146 ~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~ 175 (689)
T 1yiq_A 146 SVDTRADHKRSYTITGAPRVVNGKVVIGNG 175 (689)
T ss_dssp EEECCSCTTSCCBCCSCCEEETTEEEECCB
T ss_pred eecCcCCCCCCccccCCcEEECCEEEEEeC
Confidence 7543211111 1222233345899988654
No 196
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=21.58 E-value=2.4e+02 Score=23.25 Aligned_cols=57 Identities=9% Similarity=0.195 Sum_probs=33.7
Q ss_pred ceEEeCC-CcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEEc-CCCC--CC-CccceeeEEcCCCcEEEeCC
Q 043381 69 EMLLLPT-GDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSEL-TPTS--KP-RMCHSTSVVLPDGKILVAGS 143 (286)
Q Consensus 69 ~~v~Lpd-G~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~~-a~~~--~~-R~yHS~A~LLpDGrVlv~GG 143 (286)
....-+| |++||..... ....||++ . ++..+ .... .+ ..-++ ....+||++|++..
T Consensus 75 ~i~~~~~~g~l~v~~~~~--------------~l~~~d~~-g---~~~~~~~~~~~~~~~~~~~~-i~~d~~g~l~v~~~ 135 (314)
T 1pjx_A 75 GCQCDRDANQLFVADMRL--------------GLLVVQTD-G---TFEEIAKKDSEGRRMQGCND-CAFDYEGNLWITAP 135 (314)
T ss_dssp EEEECSSSSEEEEEETTT--------------EEEEEETT-S---CEEECCSBCTTSCBCBCCCE-EEECTTSCEEEEEC
T ss_pred eEEEecCCCcEEEEECCC--------------CEEEEeCC-C---CEEEEEeccCCCccccCCcC-EEECCCCCEEEEec
Confidence 4456688 9999876421 23578887 5 66554 3211 11 11223 34468999999875
Q ss_pred C
Q 043381 144 N 144 (286)
Q Consensus 144 ~ 144 (286)
.
T Consensus 136 ~ 136 (314)
T 1pjx_A 136 A 136 (314)
T ss_dssp B
T ss_pred C
Confidence 4
No 197
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=21.24 E-value=3.4e+02 Score=22.19 Aligned_cols=52 Identities=8% Similarity=0.005 Sum_probs=27.6
Q ss_pred cEEEEEecCCCCCeEee-cCCCCc-cccceEEeCCCc-EEEEcCccCCCCCccCCCCCCCccEEecCCCC
Q 043381 43 DCGRIEITNKSATWQRE-MMPSPR-VMGEMLLLPTGD-VLIINGAKKGTAGWNFATDPNTTPVLYEPNDP 109 (286)
Q Consensus 43 s~~~id~~~~~~~W~~~-~M~~~R-~~~~~v~LpdG~-VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~ 109 (286)
+..++|+.. .+.... .+.... .-....+-|||+ +|+.+... ....+||+.+.
T Consensus 12 ~v~~~d~~~--~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~-------------~~v~~~d~~~~ 66 (337)
T 1pby_B 12 KLVVIDTEK--MAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKS-------------ESLVKIDLVTG 66 (337)
T ss_dssp EEEEEETTT--TEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTT-------------TEEEEEETTTC
T ss_pred eEEEEECCC--CcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCC-------------CeEEEEECCCC
Confidence 455677653 222222 333321 134457789995 56655422 13568998876
No 198
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=20.96 E-value=4.1e+02 Score=22.95 Aligned_cols=52 Identities=6% Similarity=0.170 Sum_probs=33.9
Q ss_pred CcEEEEEecCCCCCeEee-cCCCCccccceEEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCC
Q 043381 42 QDCGRIEITNKSATWQRE-MMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDP 109 (286)
Q Consensus 42 ~s~~~id~~~~~~~W~~~-~M~~~R~~~~~v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~ 109 (286)
++..++|+.. .+-... +++. +.++.++.+-+++||++.... ....+||+++-
T Consensus 43 S~v~~vD~~t--gkv~~~~~l~~-~~fgeGi~~~~~~ly~ltw~~-------------~~v~v~D~~tl 95 (243)
T 3mbr_X 43 SSVRKVDLET--GRILQRAEVPP-PYFGAGIVAWRDRLIQLTWRN-------------HEGFVYDLATL 95 (243)
T ss_dssp CEEEEEETTT--CCEEEEEECCT-TCCEEEEEEETTEEEEEESSS-------------SEEEEEETTTT
T ss_pred ceEEEEECCC--CCEEEEEeCCC-CcceeEEEEeCCEEEEEEeeC-------------CEEEEEECCcC
Confidence 4566788863 444444 5653 566666767689999986533 14569999875
No 199
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=20.76 E-value=4.4e+02 Score=23.26 Aligned_cols=104 Identities=11% Similarity=0.106 Sum_probs=0.0
Q ss_pred CCccEEEEEcCCCCCCCcccCCCccccccCcEEEEEecCCCCCeEeecCCCCccccceEEeCCCcEEEEcCccCCCCCcc
Q 043381 13 EIRAEVLICGGAKPEAGMLAGKGEFMNALQDCGRIEITNKSATWQREMMPSPRVMGEMLLLPTGDVLIINGAKKGTAGWN 92 (286)
Q Consensus 13 ~~~~~Vlv~GG~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~~M~~~R~~~~~v~LpdG~VlvvGG~~~g~ag~~ 92 (286)
+..++++++.|.. ....+||+....-.-+. ..++.++.++.+-+++||++...+.
T Consensus 62 ~~~~~Ly~stG~~----------------g~v~~iD~~Tgkv~~~~---l~~~~FgeGit~~g~~Ly~ltw~~~------ 116 (268)
T 3nok_A 62 FHQGHFFESTGHQ----------------GTLRQLSLESAQPVWME---RLGNIFAEGLASDGERLYQLTWTEG------ 116 (268)
T ss_dssp EETTEEEEEETTT----------------TEEEECCSSCSSCSEEE---ECTTCCEEEEEECSSCEEEEESSSC------
T ss_pred EECCEEEEEcCCC----------------CEEEEEECCCCcEEeEE---CCCCcceeEEEEeCCEEEEEEccCC------
Q ss_pred CCCCCCCccEEecCCCCCCCceEEcCCCCCCCccceeeEEcCCCcEEEeCCCCCCCcccCCCCCCCcccEEEEEeCCCC
Q 043381 93 FATDPNTTPVLYEPNDPINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPHSRYNLTSGSKYPTELRIEKFYPPYF 171 (286)
Q Consensus 93 ~~~~~~~~~e~YdP~t~~g~~wt~~a~~~~~R~yHS~A~LLpDGrVlv~GG~~~~~~~~~~~~~~p~~~~vE~y~Ppyl 171 (286)
...+||+++- +-...-+.. -++.++.-.++++|++-| .-++.+++|..+
T Consensus 117 -------~v~V~D~~Tl---~~~~ti~~~----~eGwGLt~Dg~~L~vSdG----------------s~~l~~iDp~T~ 165 (268)
T 3nok_A 117 -------LLFTWSGMPP---QRERTTRYS----GEGWGLCYWNGKLVRSDG----------------GTMLTFHEPDGF 165 (268)
T ss_dssp -------EEEEEETTTT---EEEEEEECS----SCCCCEEEETTEEEEECS----------------SSEEEEECTTTC
T ss_pred -------EEEEEECCcC---cEEEEEeCC----CceeEEecCCCEEEEECC----------------CCEEEEEcCCCC
No 200
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=20.48 E-value=4e+02 Score=22.66 Aligned_cols=63 Identities=14% Similarity=0.272 Sum_probs=34.4
Q ss_pred EEeCCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCCceEE-cCCCC-CCCccceeeEEcCCCcEEEeCCC
Q 043381 71 LLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINERFSE-LTPTS-KPRMCHSTSVVLPDGKILVAGSN 144 (286)
Q Consensus 71 v~LpdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~~wt~-~a~~~-~~R~yHS~A~LLpDGrVlv~GG~ 144 (286)
..-| |.+++..|... .+. .......+||+.+. +... +.+.. .-..-++.| +-|||+|||+...
T Consensus 247 ~~~p-g~~~~~~g~~~-v~~-----~~~~~v~~~~~~~g---~~~~~~~~~~~~~~~p~~ia-~~~dG~lyvad~~ 311 (329)
T 3fvz_A 247 SYIP-GFLFAVNGKPY-FGD-----QEPVQGFVMNFSSG---EIIDVFKPVRKHFDMPHDIV-ASEDGTVYIGDAH 311 (329)
T ss_dssp EEET-TEEEEEECCCC-TTC-----SCCCCEEEEETTTC---CEEEEECCSSSCCSSEEEEE-ECTTSEEEEEESS
T ss_pred eecC-CEEEEeCCCEE-ecc-----CCCcEEEEEEcCCC---eEEEEEcCCCCccCCeeEEE-ECCCCCEEEEECC
Confidence 3455 88888877532 111 11234568998776 5543 22111 111123444 4799999999764
No 201
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=20.32 E-value=93 Score=27.11 Aligned_cols=20 Identities=25% Similarity=0.383 Sum_probs=14.1
Q ss_pred cceeeEEcCCCcEEEeCCCCCC
Q 043381 126 CHSTSVVLPDGKILVAGSNPHS 147 (286)
Q Consensus 126 yHS~A~LLpDGrVlv~GG~~~~ 147 (286)
+|+.|+. ||+||.-|.+...
T Consensus 229 ~h~~al~--~g~v~~wG~n~~g 248 (282)
T 3qhy_B 229 WYSLALK--NGKVIAWGSSRTA 248 (282)
T ss_dssp SCEEEEE--TTEEEEESTTCCC
T ss_pred CEEEEEE--CCEEEEecCCCCc
Confidence 5665544 9999998886544
No 202
>2ydt_A EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; 1.60A {Gibberella zeae} PDB: 2w5n_A* 2w5o_A* 2ydp_A
Probab=20.32 E-value=2.1e+02 Score=26.21 Aligned_cols=57 Identities=9% Similarity=0.356 Sum_probs=35.9
Q ss_pred CCCcEEEEcCccCCCCCccCCCCCCCccEEecCCCCCCC--ceEEcCCCCCCCccceeeEEcCCC--cEEEeCCCCCC
Q 043381 74 PTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPNDPINE--RFSELTPTSKPRMCHSTSVVLPDG--KILVAGSNPHS 147 (286)
Q Consensus 74 pdG~VlvvGG~~~g~ag~~~~~~~~~~~e~YdP~t~~g~--~wt~~a~~~~~R~yHS~A~LLpDG--rVlv~GG~~~~ 147 (286)
+||+|+++++... ++|- .++.|+ +|..... ..+..|-...+.+.++ .++++|+....
T Consensus 286 ~~g~l~~s~~~~~---------------~v~~-~~~~g~~~~W~~~~~-~~~~~Ys~~l~~~~~~~~~l~~~~~~~~~ 346 (367)
T 2ydt_A 286 KNGTIVVSCGTRS---------------EIFT-NQALGDASAWKKWDV-PQPTAYTRSLLTFQKDPDLLMIMGAGILP 346 (367)
T ss_dssp TTCEEEEECSSCS---------------CEEE-ESSTTCTTCCEEECC-SSCCCTTCEEEEETTEEEEEEEEECCCSS
T ss_pred CCCeEEEEcCCCc---------------eEEE-ECCCCCCCcceeccC-CCCCCCCcceEecCCCCCEEEEecCcccC
Confidence 6889999987321 2221 122233 8998755 4667787656666555 88888886554
Done!