Query 043382
Match_columns 329
No_of_seqs 237 out of 1332
Neff 6.5
Searched_HMMs 46136
Date Fri Mar 29 04:29:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043382.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/043382hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02192 3-ketoacyl-CoA syntha 100.0 7E-75 1.5E-79 583.4 24.5 319 3-327 26-511 (511)
2 PLN02854 3-ketoacyl-CoA syntha 100.0 2.8E-71 6.1E-76 558.4 24.8 316 3-323 33-520 (521)
3 PLN02377 3-ketoacyl-CoA syntha 100.0 1.3E-69 2.7E-74 545.8 22.6 310 3-321 22-500 (502)
4 PLN02932 3-ketoacyl-CoA syntha 100.0 1.3E-67 2.9E-72 528.5 18.9 304 12-322 1-477 (478)
5 PLN00415 3-ketoacyl-CoA syntha 100.0 3.6E-58 7.8E-63 456.7 13.9 261 60-321 96-465 (466)
6 COG0332 FabH 3-oxoacyl-[acyl-c 100.0 6.7E-41 1.5E-45 321.1 14.6 217 64-296 32-323 (323)
7 PF08392 FAE1_CUT1_RppA: FAE1/ 100.0 2.6E-41 5.5E-46 317.6 7.6 174 59-233 44-290 (290)
8 PLN03168 chalcone synthase; Pr 100.0 6.2E-34 1.3E-38 280.9 19.5 255 43-298 32-388 (389)
9 PLN03172 chalcone synthase fam 100.0 2.4E-32 5.1E-37 269.9 20.7 254 43-296 33-387 (393)
10 cd00831 CHS_like Chalcone and 100.0 1.3E-32 2.9E-37 267.9 18.1 234 60-293 38-361 (361)
11 PLN03170 chalcone synthase; Pr 100.0 2.1E-32 4.6E-37 270.9 18.9 257 39-296 34-391 (401)
12 PLN03169 chalcone synthase fam 100.0 1.6E-32 3.4E-37 271.1 17.2 238 59-296 56-389 (391)
13 PLN03171 chalcone synthase-lik 100.0 2.8E-32 6.2E-37 269.9 18.5 240 59-298 58-397 (399)
14 PRK12880 3-oxoacyl-(acyl carri 100.0 2.4E-32 5.1E-37 266.4 16.7 218 63-301 39-344 (353)
15 PRK05963 3-oxoacyl-(acyl carri 100.0 4.5E-32 9.8E-37 260.2 17.3 214 64-295 32-326 (326)
16 PLN03173 chalcone synthase; Pr 100.0 2.1E-31 4.5E-36 263.0 18.5 240 58-297 51-388 (391)
17 COG3424 BcsA Predicted naringe 100.0 2.9E-31 6.3E-36 248.2 16.8 229 68-297 43-354 (356)
18 PRK07204 3-oxoacyl-(acyl carri 100.0 1.7E-30 3.6E-35 249.7 17.8 215 64-295 33-329 (329)
19 PLN02326 3-oxoacyl-[acyl-carri 100.0 1E-30 2.2E-35 257.0 16.1 216 64-295 76-379 (379)
20 PRK09258 3-oxoacyl-(acyl carri 100.0 1.6E-30 3.6E-35 250.4 17.0 217 64-295 41-338 (338)
21 PRK12879 3-oxoacyl-(acyl carri 100.0 1.2E-29 2.5E-34 242.8 17.7 215 64-295 33-324 (325)
22 CHL00203 fabH 3-oxoacyl-acyl-c 100.0 1.2E-29 2.6E-34 243.9 15.7 214 64-295 31-325 (326)
23 PRK06840 hypothetical protein; 100.0 2.9E-28 6.2E-33 235.2 18.5 216 64-296 33-336 (339)
24 TIGR00747 fabH 3-oxoacyl-(acyl 100.0 6.7E-28 1.5E-32 230.2 16.0 214 64-295 31-318 (318)
25 cd00830 KAS_III Ketoacyl-acyl 100.0 9.9E-28 2.1E-32 228.3 16.3 213 64-293 30-320 (320)
26 TIGR00748 HMG_CoA_syn_Arc hydr 99.9 9.9E-28 2.1E-32 233.1 13.1 219 64-300 30-312 (345)
27 PRK04262 hypothetical protein; 99.9 4.5E-27 9.9E-32 228.3 15.3 218 64-299 31-312 (347)
28 PRK06816 3-oxoacyl-(acyl carri 99.9 1.3E-26 2.9E-31 227.7 17.4 221 64-296 38-378 (378)
29 PRK09352 3-oxoacyl-(acyl carri 99.9 3.1E-26 6.7E-31 218.6 16.9 216 64-296 32-319 (319)
30 PRK07515 3-oxoacyl-(acyl carri 99.9 4.1E-26 9E-31 223.4 17.1 229 63-295 54-371 (372)
31 cd00827 init_cond_enzymes "ini 99.9 3.3E-24 7.1E-29 204.5 13.3 213 65-293 29-324 (324)
32 TIGR01835 HMG-CoA-S_prok 3-hyd 99.9 3.9E-22 8.5E-27 196.3 18.2 214 64-295 29-317 (379)
33 PF00195 Chal_sti_synt_N: Chal 99.8 1.6E-19 3.4E-24 165.8 9.4 125 58-182 49-196 (226)
34 PLN02577 hydroxymethylglutaryl 99.8 2.4E-18 5.1E-23 172.9 17.7 113 64-194 33-171 (459)
35 COG3425 PksG 3-hydroxy-3-methy 99.8 9.5E-18 2.1E-22 162.9 16.2 218 64-297 31-312 (377)
36 cd00327 cond_enzymes Condensin 99.8 7.4E-18 1.6E-22 154.9 12.2 189 100-293 8-254 (254)
37 TIGR01833 HMG-CoA-S_euk 3-hydr 99.7 5.1E-16 1.1E-20 155.9 16.5 111 69-194 33-168 (454)
38 cd00825 decarbox_cond_enzymes 99.6 9.1E-15 2E-19 139.6 10.8 191 100-293 12-332 (332)
39 PF08541 ACP_syn_III_C: 3-Oxoa 99.5 7.3E-14 1.6E-18 110.1 5.5 73 223-295 13-90 (90)
40 PF02797 Chal_sti_synt_C: Chal 99.3 1.5E-12 3.2E-17 113.1 4.6 74 223-296 62-150 (151)
41 TIGR02845 spore_V_AD stage V s 98.9 5.7E-09 1.2E-13 100.4 10.7 89 100-194 51-170 (327)
42 PF01154 HMG_CoA_synt_N: Hydro 98.9 2.5E-09 5.3E-14 94.6 5.2 100 65-179 34-150 (174)
43 PRK06147 3-oxoacyl-(acyl carri 98.8 1.5E-08 3.2E-13 99.1 9.0 217 64-296 46-343 (348)
44 PRK08304 stage V sporulation p 98.8 3.1E-08 6.8E-13 95.6 10.1 89 100-194 57-176 (337)
45 cd00751 thiolase Thiolase are 98.8 2.1E-08 4.5E-13 99.2 8.3 80 101-180 24-116 (386)
46 TIGR01930 AcCoA-C-Actrans acet 98.6 8.3E-08 1.8E-12 95.0 8.3 81 100-180 22-115 (386)
47 PRK07108 acetyl-CoA acetyltran 98.6 1.2E-07 2.6E-12 94.2 8.6 80 101-180 29-122 (392)
48 PRK05656 acetyl-CoA acetyltran 98.6 2E-07 4.4E-12 92.6 8.6 81 100-180 27-120 (393)
49 PRK06205 acetyl-CoA acetyltran 98.5 1.9E-07 4.1E-12 93.1 8.1 81 100-180 27-120 (404)
50 PRK08235 acetyl-CoA acetyltran 98.5 3.4E-07 7.4E-12 91.0 8.5 81 100-180 27-120 (393)
51 PRK06059 lipid-transfer protei 98.5 3.7E-07 7.9E-12 90.7 8.6 80 100-180 24-117 (399)
52 PRK09052 acetyl-CoA acetyltran 98.5 4.6E-07 1E-11 90.3 8.5 81 100-180 32-127 (399)
53 PRK08313 acetyl-CoA acetyltran 98.4 4.7E-07 1E-11 89.7 7.8 79 101-180 26-118 (386)
54 PRK09051 beta-ketothiolase; Pr 98.4 6.4E-07 1.4E-11 89.1 8.6 81 100-180 28-122 (394)
55 PRK08170 acetyl-CoA acetyltran 98.4 8.6E-07 1.9E-11 89.0 8.6 81 100-180 28-121 (426)
56 PRK12578 acetyl-CoA acetyltran 98.4 8.5E-07 1.9E-11 87.7 8.4 79 101-180 23-114 (385)
57 PRK08242 acetyl-CoA acetyltran 98.4 1.1E-06 2.3E-11 87.8 8.6 81 100-180 29-123 (402)
58 cd00829 SCP-x_thiolase Thiolas 98.4 9.6E-07 2.1E-11 86.5 7.9 80 100-180 17-109 (375)
59 cd00826 nondecarbox_cond_enzym 98.3 1.5E-06 3.2E-11 86.4 8.2 80 100-180 24-117 (393)
60 PRK06065 acetyl-CoA acetyltran 98.3 2.2E-06 4.8E-11 85.3 8.1 79 100-179 30-122 (392)
61 PRK05790 putative acyltransfer 98.3 2.5E-06 5.3E-11 84.6 8.3 81 100-180 27-120 (393)
62 PRK06954 acetyl-CoA acetyltran 98.2 2.5E-06 5.5E-11 84.9 7.9 80 100-179 32-124 (397)
63 PRK06064 acetyl-CoA acetyltran 98.2 4.9E-06 1.1E-10 82.3 8.1 80 100-180 23-117 (389)
64 PRK12404 stage V sporulation p 98.1 4.6E-06 1E-10 80.4 6.7 78 96-179 50-140 (334)
65 PF00108 Thiolase_N: Thiolase, 98.1 7.2E-06 1.6E-10 77.3 7.5 82 99-180 26-120 (264)
66 PRK07661 acetyl-CoA acetyltran 98.1 1.2E-05 2.7E-10 79.9 8.8 81 100-180 28-122 (391)
67 PLN02287 3-ketoacyl-CoA thiola 98.1 1.1E-05 2.4E-10 81.7 8.6 81 100-180 72-166 (452)
68 PRK07851 acetyl-CoA acetyltran 98.0 1.7E-05 3.7E-10 79.2 8.5 80 100-180 28-122 (406)
69 PRK06158 thiolase; Provisional 98.0 1.3E-05 2.9E-10 79.3 7.3 76 100-179 29-117 (384)
70 PRK06289 acetyl-CoA acetyltran 98.0 1.9E-05 4.1E-10 78.7 7.7 77 101-180 28-122 (403)
71 PRK08963 fadI 3-ketoacyl-CoA t 97.9 2.5E-05 5.3E-10 78.6 7.8 82 99-180 29-123 (428)
72 PRK06633 acetyl-CoA acetyltran 97.9 2.3E-05 5E-10 78.0 7.5 82 99-180 27-121 (392)
73 PRK06445 acetyl-CoA acetyltran 97.9 1.8E-05 3.9E-10 78.7 6.6 78 100-179 33-126 (394)
74 PRK07516 acetyl-CoA acetyltran 97.9 4.2E-05 9.2E-10 75.8 7.9 80 100-180 23-117 (389)
75 PRK13359 beta-ketoadipyl CoA t 97.8 5.3E-05 1.2E-09 75.6 8.5 82 99-180 26-122 (400)
76 PRK09050 beta-ketoadipyl CoA t 97.8 4.9E-05 1.1E-09 75.9 8.1 81 100-180 27-122 (401)
77 PRK06366 acetyl-CoA acetyltran 97.8 5.7E-05 1.2E-09 75.0 8.4 81 99-179 26-119 (388)
78 PRK07850 acetyl-CoA acetyltran 97.8 5.7E-05 1.2E-09 75.1 8.3 82 99-180 26-121 (387)
79 PLN02644 acetyl-CoA C-acetyltr 97.8 6.5E-05 1.4E-09 74.7 8.5 80 100-179 26-118 (394)
80 PRK08131 acetyl-CoA acetyltran 97.8 6.7E-05 1.5E-09 74.9 8.6 82 99-180 26-121 (401)
81 TIGR02430 pcaF beta-ketoadipyl 97.8 7.6E-05 1.7E-09 74.5 8.1 81 100-180 26-121 (400)
82 PRK06157 acetyl-CoA acetyltran 97.7 8.8E-05 1.9E-09 73.9 8.2 80 100-180 28-120 (398)
83 TIGR02446 FadI fatty oxidation 97.7 8.8E-05 1.9E-09 74.7 7.9 82 99-180 31-125 (430)
84 cd00834 KAS_I_II Beta-ketoacyl 97.7 0.00012 2.5E-09 72.1 8.1 82 98-179 70-192 (406)
85 PRK06365 acetyl-CoA acetyltran 97.7 0.00011 2.5E-09 73.9 8.0 80 100-180 38-131 (430)
86 smart00825 PKS_KS Beta-ketoacy 97.7 7.8E-05 1.7E-09 74.1 6.5 78 99-178 87-200 (424)
87 PRK08256 lipid-transfer protei 97.7 0.00012 2.6E-09 72.6 7.7 77 101-180 24-112 (391)
88 KOG1393 Hydroxymethylglutaryl- 97.6 0.0014 3.1E-08 64.3 14.4 77 102-178 63-156 (462)
89 PRK06504 acetyl-CoA acetyltran 97.6 0.00018 4E-09 71.6 8.3 82 99-180 26-121 (390)
90 PRK08947 fadA 3-ketoacyl-CoA t 97.6 0.00018 3.8E-09 71.6 7.7 82 99-180 27-123 (387)
91 PTZ00455 3-ketoacyl-CoA thiola 97.6 0.00024 5.1E-09 71.8 8.6 82 99-180 48-152 (438)
92 TIGR02445 fadA fatty oxidation 97.4 0.00033 7.2E-09 69.6 7.4 82 99-180 25-121 (385)
93 PRK08257 acetyl-CoA acetyltran 97.4 0.00054 1.2E-08 70.3 8.8 80 100-179 28-120 (498)
94 PRK09268 acetyl-CoA acetyltran 97.4 0.00055 1.2E-08 69.0 8.4 82 99-180 31-125 (427)
95 PRK07801 acetyl-CoA acetyltran 97.3 0.00057 1.2E-08 67.6 7.7 80 100-179 27-120 (382)
96 PRK08142 acetyl-CoA acetyltran 97.3 0.00064 1.4E-08 67.6 7.3 76 100-179 26-113 (388)
97 PRK06025 acetyl-CoA acetyltran 97.2 0.0013 2.9E-08 66.0 8.8 82 99-180 29-124 (417)
98 PRK07937 lipid-transfer protei 97.1 0.002 4.4E-08 63.3 8.1 79 101-179 26-114 (352)
99 PRK06066 acetyl-CoA acetyltran 97.0 0.0025 5.3E-08 63.5 8.7 80 100-180 26-117 (385)
100 cd00833 PKS polyketide synthas 97.0 0.0011 2.3E-08 65.6 6.1 80 99-178 87-200 (421)
101 PRK07855 lipid-transfer protei 96.9 0.0024 5.3E-08 63.4 7.7 72 100-175 25-108 (386)
102 PRK06690 acetyl-CoA acetyltran 96.4 0.011 2.5E-07 58.3 8.0 77 100-180 26-114 (361)
103 PF08545 ACP_syn_III: 3-Oxoacy 96.3 0.0027 5.8E-08 48.9 2.2 35 160-194 19-63 (80)
104 PRK06501 3-oxoacyl-(acyl carri 96.1 0.01 2.2E-07 59.6 6.3 75 100-176 76-203 (425)
105 cd00828 elong_cond_enzymes "el 96.1 0.021 4.5E-07 56.5 8.0 82 98-179 71-193 (407)
106 TIGR03150 fabF beta-ketoacyl-a 95.7 0.036 7.8E-07 54.7 8.0 79 99-177 71-190 (407)
107 PRK07314 3-oxoacyl-(acyl carri 95.6 0.057 1.2E-06 53.6 8.8 80 99-178 72-192 (411)
108 PRK08439 3-oxoacyl-(acyl carri 94.5 0.12 2.6E-06 51.5 7.6 79 99-177 72-191 (406)
109 PF08540 HMG_CoA_synt_C: Hydro 94.1 0.036 7.9E-07 53.0 2.8 53 243-295 147-201 (282)
110 COG0183 PaaJ Acetyl-CoA acetyl 93.8 0.16 3.4E-06 50.7 6.9 81 100-180 28-124 (392)
111 PRK06333 3-oxoacyl-(acyl carri 93.5 0.28 6E-06 49.0 8.0 79 99-177 82-202 (424)
112 PRK07103 polyketide beta-ketoa 93.0 0.34 7.3E-06 48.4 7.8 77 99-177 80-196 (410)
113 PF07451 SpoVAD: Stage V sporu 93.0 0.36 7.8E-06 46.7 7.4 79 95-179 46-137 (329)
114 PF00109 ketoacyl-synt: Beta-k 91.6 0.58 1.3E-05 42.8 7.0 82 99-180 87-209 (254)
115 KOG2708 Predicted metalloprote 91.6 0.51 1.1E-05 44.1 6.4 119 74-198 29-163 (336)
116 PF08541 ACP_syn_III_C: 3-Oxoa 91.6 0.28 6.1E-06 38.0 4.1 62 111-176 1-78 (90)
117 PRK08722 3-oxoacyl-(acyl carri 90.8 1.3 2.8E-05 44.5 9.0 80 100-179 75-195 (414)
118 PTZ00050 3-oxoacyl-acyl carrie 90.6 0.81 1.8E-05 45.9 7.4 79 99-177 77-197 (421)
119 PRK12879 3-oxoacyl-(acyl carri 89.2 0.83 1.8E-05 43.6 6.0 73 99-175 223-311 (325)
120 PRK07967 3-oxoacyl-(acyl carri 88.8 2.2 4.7E-05 42.8 8.8 79 100-179 72-193 (406)
121 PLN02836 3-oxoacyl-[acyl-carri 88.6 1.7 3.6E-05 43.9 7.9 79 99-177 93-213 (437)
122 PRK09352 3-oxoacyl-(acyl carri 87.9 1.2 2.5E-05 42.5 6.0 74 98-175 216-305 (319)
123 cd00830 KAS_III Ketoacyl-acyl 87.5 1.2 2.5E-05 42.3 5.7 75 97-175 219-309 (320)
124 PRK09116 3-oxoacyl-(acyl carri 87.5 2.4 5.1E-05 42.4 8.1 80 99-179 73-195 (405)
125 PRK06816 3-oxoacyl-(acyl carri 86.9 2.9 6.3E-05 41.3 8.3 76 99-178 270-366 (378)
126 cd00832 CLF Chain-length facto 86.5 2.6 5.6E-05 42.0 7.8 79 99-178 71-190 (399)
127 KOG1406 Peroxisomal 3-ketoacyl 86.5 0.88 1.9E-05 43.3 4.1 73 104-180 34-119 (408)
128 PRK07204 3-oxoacyl-(acyl carri 86.4 1.2 2.6E-05 42.7 5.2 73 98-174 227-315 (329)
129 PRK06519 3-oxoacyl-(acyl carri 86.4 2.9 6.3E-05 41.9 8.1 79 99-177 73-204 (398)
130 PRK05963 3-oxoacyl-(acyl carri 85.8 2 4.4E-05 41.1 6.4 76 96-175 222-313 (326)
131 PLN02787 3-oxoacyl-[acyl-carri 85.5 3.4 7.3E-05 43.2 8.2 78 99-177 199-320 (540)
132 TIGR00747 fabH 3-oxoacyl-(acyl 84.3 3 6.5E-05 39.7 6.8 73 98-175 216-305 (318)
133 KOG1390 Acetyl-CoA acetyltrans 83.8 1.9 4.1E-05 42.1 5.1 81 99-179 30-123 (396)
134 KOG1391 Acetyl-CoA acetyltrans 83.4 1.6 3.5E-05 41.5 4.3 76 99-180 28-123 (396)
135 PRK09258 3-oxoacyl-(acyl carri 83.4 3.2 6.8E-05 39.9 6.6 76 97-176 235-326 (338)
136 PRK09185 3-oxoacyl-(acyl carri 82.2 5.5 0.00012 39.5 8.0 45 135-179 137-191 (392)
137 PRK14691 3-oxoacyl-(acyl carri 80.8 7.1 0.00015 38.3 8.1 77 101-177 6-120 (342)
138 PLN02326 3-oxoacyl-[acyl-carri 80.6 4.2 9E-05 40.2 6.4 73 98-174 277-365 (379)
139 PRK06840 hypothetical protein; 80.3 4.9 0.00011 38.7 6.7 69 102-175 238-322 (339)
140 PRK05952 3-oxoacyl-(acyl carri 78.0 7.6 0.00016 38.6 7.3 76 102-177 59-175 (381)
141 CHL00203 fabH 3-oxoacyl-acyl-c 77.6 4.8 0.0001 38.6 5.7 69 102-174 227-311 (326)
142 PRK09585 anmK anhydro-N-acetyl 77.4 10 0.00022 37.8 7.9 71 89-159 59-139 (365)
143 KOG1392 Acetyl-CoA acetyltrans 76.9 3 6.5E-05 40.2 3.9 81 99-179 66-159 (465)
144 PRK08242 acetyl-CoA acetyltran 76.7 5.7 0.00012 39.9 6.1 50 104-159 303-352 (402)
145 PRK05656 acetyl-CoA acetyltran 76.6 5.3 0.00011 39.8 5.8 51 103-159 293-343 (393)
146 PRK09050 beta-ketoadipyl CoA t 76.5 4.4 9.6E-05 40.6 5.2 53 103-159 299-351 (401)
147 PRK13359 beta-ketoadipyl CoA t 76.4 4.3 9.3E-05 40.7 5.1 53 103-159 298-350 (400)
148 PRK06366 acetyl-CoA acetyltran 76.1 4.9 0.00011 39.9 5.4 50 104-159 288-337 (388)
149 PRK08257 acetyl-CoA acetyltran 76.0 5.3 0.00011 41.3 5.8 52 104-159 295-347 (498)
150 PRK05790 putative acyltransfer 75.7 4.8 0.0001 39.9 5.2 51 103-159 293-343 (393)
151 cd00751 thiolase Thiolase are 75.5 5.1 0.00011 39.6 5.4 51 103-159 287-337 (386)
152 PRK07851 acetyl-CoA acetyltran 75.4 3.8 8.2E-05 41.1 4.4 51 103-159 305-355 (406)
153 cd00825 decarbox_cond_enzymes 75.1 12 0.00026 35.4 7.6 47 101-147 205-252 (332)
154 PRK14878 UGMP family protein; 74.3 6.2 0.00013 38.3 5.5 84 95-179 41-132 (323)
155 PRK06445 acetyl-CoA acetyltran 74.1 8.3 0.00018 38.4 6.5 51 103-159 294-344 (394)
156 PRK06025 acetyl-CoA acetyltran 73.8 5.4 0.00012 40.3 5.1 50 104-159 318-367 (417)
157 PF02801 Ketoacyl-synt_C: Beta 73.3 2.3 5.1E-05 34.8 2.0 45 104-148 28-73 (119)
158 COG0332 FabH 3-oxoacyl-[acyl-c 73.2 5.6 0.00012 38.9 4.9 53 94-150 216-268 (323)
159 PRK07850 acetyl-CoA acetyltran 73.1 8.6 0.00019 38.3 6.3 50 104-159 288-337 (387)
160 PRK07910 3-oxoacyl-(acyl carri 73.1 14 0.00029 37.2 7.7 80 99-178 83-201 (418)
161 PRK08235 acetyl-CoA acetyltran 73.0 5.8 0.00012 39.6 5.0 50 104-159 294-343 (393)
162 TIGR02430 pcaF beta-ketoadipyl 72.8 5.9 0.00013 39.7 5.0 52 104-159 299-350 (400)
163 PRK09051 beta-ketothiolase; Pr 72.2 8.1 0.00017 38.6 5.9 51 103-159 294-344 (394)
164 TIGR03722 arch_KAE1 universal 72.0 6.1 0.00013 38.3 4.8 84 95-179 42-133 (322)
165 PRK09604 UGMP family protein; 71.7 8.4 0.00018 37.5 5.7 72 100-175 52-136 (332)
166 PRK06205 acetyl-CoA acetyltran 71.2 7.8 0.00017 38.7 5.5 53 103-159 300-353 (404)
167 PF01135 PCMT: Protein-L-isoas 71.1 4.2 9.1E-05 37.1 3.3 41 250-290 49-89 (209)
168 TIGR00748 HMG_CoA_syn_Arc hydr 70.8 10 0.00022 36.9 6.2 45 101-149 208-252 (345)
169 COG0533 QRI7 Metal-dependent p 70.0 8.9 0.00019 37.8 5.4 80 101-180 52-140 (342)
170 PRK07801 acetyl-CoA acetyltran 69.7 9.4 0.0002 37.8 5.7 50 104-159 283-332 (382)
171 PRK04262 hypothetical protein; 68.8 11 0.00023 36.7 5.8 45 101-149 209-253 (347)
172 PRK06954 acetyl-CoA acetyltran 68.3 8.1 0.00018 38.6 4.9 50 104-159 298-347 (397)
173 TIGR00329 gcp_kae1 metallohydr 67.9 10 0.00022 36.4 5.3 78 100-177 49-136 (305)
174 PRK14691 3-oxoacyl-(acyl carri 67.4 8.1 0.00018 37.9 4.6 45 103-147 208-253 (342)
175 TIGR01930 AcCoA-C-Actrans acet 67.3 9.7 0.00021 37.7 5.2 50 104-159 289-338 (386)
176 PRK09052 acetyl-CoA acetyltran 66.4 10 0.00023 37.9 5.3 52 102-159 298-349 (399)
177 PRK07661 acetyl-CoA acetyltran 66.4 9.9 0.00021 37.9 5.1 52 102-159 290-341 (391)
178 PF02803 Thiolase_C: Thiolase, 65.6 3.9 8.5E-05 34.3 1.8 50 104-159 25-74 (123)
179 PRK06147 3-oxoacyl-(acyl carri 65.4 14 0.0003 36.1 5.9 45 102-146 235-280 (348)
180 COG2377 Predicted molecular ch 65.2 26 0.00057 34.8 7.6 69 90-158 62-142 (371)
181 PLN02287 3-ketoacyl-CoA thiola 65.2 10 0.00022 38.7 5.0 51 103-159 333-383 (452)
182 cd00829 SCP-x_thiolase Thiolas 64.9 10 0.00022 37.0 4.8 44 102-149 252-295 (375)
183 PRK06690 acetyl-CoA acetyltran 64.7 13 0.00028 36.8 5.4 51 103-159 260-310 (361)
184 TIGR02445 fadA fatty oxidation 63.1 22 0.00048 35.3 6.9 53 103-159 282-335 (385)
185 PRK09605 bifunctional UGMP fam 62.8 13 0.00028 38.4 5.3 83 95-179 45-136 (535)
186 TIGR03723 bact_gcp putative gl 62.6 16 0.00034 35.4 5.6 60 100-159 50-110 (314)
187 COG1214 Inactive homolog of me 61.6 19 0.00041 33.1 5.6 61 102-162 40-101 (220)
188 TIGR03150 fabF beta-ketoacyl-a 60.9 9.4 0.0002 37.5 3.8 45 103-147 277-322 (407)
189 PRK06504 acetyl-CoA acetyltran 60.8 12 0.00026 37.4 4.5 50 104-159 291-340 (390)
190 PRK08947 fadA 3-ketoacyl-CoA t 60.4 20 0.00043 35.7 5.9 53 103-159 284-337 (387)
191 TIGR03725 bact_YeaZ universal 60.1 8.5 0.00018 34.6 3.0 64 100-163 34-98 (202)
192 cd00327 cond_enzymes Condensin 59.5 30 0.00064 31.3 6.6 47 101-147 145-192 (254)
193 COG3321 Polyketide synthase mo 57.4 44 0.00096 37.9 8.6 79 99-177 91-203 (1061)
194 COG3425 PksG 3-hydroxy-3-methy 57.4 39 0.00085 33.8 7.3 78 100-190 208-303 (377)
195 PTZ00340 O-sialoglycoprotein e 56.0 24 0.00052 34.8 5.6 79 101-179 51-137 (345)
196 cd00828 elong_cond_enzymes "el 56.0 12 0.00025 37.0 3.4 47 101-147 274-321 (407)
197 KOG1389 3-oxoacyl CoA thiolase 55.9 20 0.00044 35.1 4.9 83 100-182 62-157 (435)
198 PRK07515 3-oxoacyl-(acyl carri 55.7 10 0.00022 37.1 3.0 32 97-128 267-298 (372)
199 PRK06519 3-oxoacyl-(acyl carri 55.0 18 0.0004 36.2 4.7 46 101-147 280-326 (398)
200 PRK09185 3-oxoacyl-(acyl carri 54.6 14 0.0003 36.6 3.8 44 103-146 262-306 (392)
201 PRK09116 3-oxoacyl-(acyl carri 54.5 12 0.00026 37.4 3.4 45 102-146 276-321 (405)
202 COG0304 FabB 3-oxoacyl-(acyl-c 54.3 14 0.0003 37.4 3.7 44 104-147 279-323 (412)
203 cd00834 KAS_I_II Beta-ketoacyl 54.0 13 0.00028 36.5 3.4 47 101-147 275-322 (406)
204 PF00814 Peptidase_M22: Glycop 53.9 9.5 0.00021 36.0 2.4 63 96-159 27-90 (268)
205 cd00831 CHS_like Chalcone and 53.7 32 0.0007 33.4 6.1 74 97-174 255-349 (361)
206 KOG1406 Peroxisomal 3-ketoacyl 53.6 13 0.00028 35.6 3.1 28 100-127 271-298 (408)
207 PRK06333 3-oxoacyl-(acyl carri 53.6 13 0.00028 37.1 3.4 45 102-146 289-334 (424)
208 smart00825 PKS_KS Beta-ketoacy 53.5 17 0.00037 36.0 4.2 29 102-130 280-309 (424)
209 PRK07855 lipid-transfer protei 52.8 15 0.00033 36.5 3.7 42 104-149 269-310 (386)
210 PRK05952 3-oxoacyl-(acyl carri 52.8 14 0.00031 36.7 3.5 44 103-146 256-300 (381)
211 cd00833 PKS polyketide synthas 52.3 18 0.00039 35.6 4.1 47 101-147 279-326 (421)
212 PRK06501 3-oxoacyl-(acyl carri 52.2 13 0.00028 37.3 3.2 44 103-146 291-335 (425)
213 cd00832 CLF Chain-length facto 51.4 17 0.00037 36.2 3.8 47 101-147 270-317 (399)
214 PRK07314 3-oxoacyl-(acyl carri 50.9 16 0.00034 36.2 3.5 44 103-146 278-322 (411)
215 PRK08722 3-oxoacyl-(acyl carri 50.7 17 0.00038 36.4 3.8 44 103-146 280-324 (414)
216 PF03702 UPF0075: Uncharacteri 50.7 22 0.00048 35.3 4.4 67 91-157 58-136 (364)
217 PTZ00050 3-oxoacyl-acyl carrie 50.5 19 0.0004 36.1 4.0 45 103-147 285-331 (421)
218 TIGR02813 omega_3_PfaA polyket 50.4 50 0.0011 41.0 8.1 79 99-177 93-235 (2582)
219 PTZ00455 3-ketoacyl-CoA thiola 49.9 20 0.00043 36.4 4.1 42 104-149 312-353 (438)
220 PRK06064 acetyl-CoA acetyltran 49.1 18 0.00039 35.7 3.6 41 104-148 261-301 (389)
221 PRK07910 3-oxoacyl-(acyl carri 48.4 19 0.00041 36.2 3.7 45 103-147 288-333 (418)
222 PLN02787 3-oxoacyl-[acyl-carri 48.3 24 0.00052 36.9 4.4 44 103-146 407-451 (540)
223 PRK06289 acetyl-CoA acetyltran 48.2 16 0.00036 36.3 3.1 42 103-148 278-319 (403)
224 TIGR01835 HMG-CoA-S_prok 3-hyd 47.9 36 0.00077 33.7 5.4 30 99-128 203-232 (379)
225 PRK07475 hypothetical protein; 47.6 92 0.002 28.9 7.9 86 64-165 137-235 (245)
226 PRK12880 3-oxoacyl-(acyl carri 47.4 25 0.00053 34.5 4.2 48 98-149 239-286 (353)
227 PLN02836 3-oxoacyl-[acyl-carri 47.4 22 0.00047 35.9 3.9 44 103-146 301-345 (437)
228 PRK12578 acetyl-CoA acetyltran 47.4 20 0.00043 35.4 3.6 41 104-148 260-300 (385)
229 COG2518 Pcm Protein-L-isoaspar 47.2 21 0.00045 32.8 3.4 38 252-289 51-88 (209)
230 PLN02644 acetyl-CoA C-acetyltr 46.1 39 0.00085 33.6 5.4 50 104-159 294-343 (394)
231 COG0304 FabB 3-oxoacyl-(acyl-c 45.9 79 0.0017 32.0 7.6 79 99-177 71-191 (412)
232 PRK07937 lipid-transfer protei 45.2 46 0.001 32.7 5.7 51 104-159 249-300 (352)
233 KOG1391 Acetyl-CoA acetyltrans 44.8 29 0.00063 33.2 3.9 50 104-159 296-345 (396)
234 PRK06158 thiolase; Provisional 43.1 23 0.0005 35.1 3.2 41 104-148 257-297 (384)
235 cd00826 nondecarbox_cond_enzym 42.7 13 0.00029 36.9 1.5 41 104-148 272-312 (393)
236 PRK06633 acetyl-CoA acetyltran 42.4 14 0.0003 37.0 1.5 51 103-159 292-342 (392)
237 PRK07516 acetyl-CoA acetyltran 39.8 21 0.00045 35.4 2.4 42 103-148 262-303 (389)
238 PRK08256 lipid-transfer protei 39.8 30 0.00066 34.2 3.5 42 104-149 267-308 (391)
239 PRK07108 acetyl-CoA acetyltran 39.3 14 0.00029 37.0 1.0 51 103-159 292-342 (392)
240 KOG2707 Predicted metalloprote 38.7 48 0.001 33.0 4.6 49 100-148 83-136 (405)
241 PRK06066 acetyl-CoA acetyltran 38.2 47 0.001 33.2 4.6 42 104-149 259-302 (385)
242 PRK08170 acetyl-CoA acetyltran 37.8 24 0.00053 35.5 2.5 25 103-127 309-333 (426)
243 PRK08142 acetyl-CoA acetyltran 37.0 31 0.00068 34.4 3.1 41 104-148 258-298 (388)
244 PRK06059 lipid-transfer protei 36.7 25 0.00054 35.0 2.4 41 104-148 276-316 (399)
245 PRK08329 threonine synthase; V 36.6 34 0.00073 33.4 3.3 35 253-287 311-345 (347)
246 PRK08131 acetyl-CoA acetyltran 36.4 19 0.00041 36.1 1.5 53 103-159 298-350 (401)
247 PRK09268 acetyl-CoA acetyltran 35.7 23 0.0005 35.8 2.0 24 104-127 312-335 (427)
248 KOG1394 3-oxoacyl-(acyl-carrie 35.7 55 0.0012 32.8 4.4 45 104-148 304-349 (440)
249 PF07736 CM_1: Chorismate muta 35.6 68 0.0015 26.9 4.4 51 105-159 24-77 (118)
250 PF13723 Ketoacyl-synt_2: Beta 34.9 78 0.0017 29.2 5.2 28 99-130 34-61 (218)
251 TIGR02446 FadI fatty oxidation 34.0 25 0.00055 35.5 2.0 39 104-146 314-352 (430)
252 PRK07103 polyketide beta-ketoa 33.7 28 0.0006 34.7 2.2 24 104-127 284-307 (410)
253 TIGR01796 CM_mono_aroH monofun 32.4 1.1E+02 0.0023 25.7 5.0 49 107-159 26-77 (117)
254 PRK08963 fadI 3-ketoacyl-CoA t 32.2 26 0.00055 35.4 1.6 24 104-127 312-335 (428)
255 cd02185 AroH Chorismate mutase 31.8 1.1E+02 0.0025 25.5 5.1 50 107-159 26-77 (117)
256 PLN03169 chalcone synthase fam 31.5 85 0.0018 31.2 5.2 51 98-150 278-328 (391)
257 PRK05183 hscA chaperone protei 29.9 1.3E+02 0.0028 32.0 6.5 57 91-148 299-355 (616)
258 COG2971 Predicted N-acetylgluc 29.6 45 0.00099 32.3 2.8 63 94-159 42-105 (301)
259 PRK13943 protein-L-isoaspartat 29.2 72 0.0016 31.1 4.1 36 254-289 61-96 (322)
260 CHL00094 dnaK heat shock prote 28.1 1.2E+02 0.0026 32.1 5.9 46 102-148 310-355 (621)
261 TIGR02350 prok_dnaK chaperone 28.0 1.1E+02 0.0024 32.1 5.6 48 99-147 303-350 (595)
262 PRK13411 molecular chaperone D 27.4 1.4E+02 0.0029 32.0 6.2 47 101-148 308-354 (653)
263 PRK13410 molecular chaperone D 27.4 1.4E+02 0.0029 32.2 6.2 49 99-148 307-355 (668)
264 PRK05571 ribose-5-phosphate is 26.9 2.9E+02 0.0062 24.0 7.0 101 58-180 13-114 (148)
265 PRK13942 protein-L-isoaspartat 26.7 79 0.0017 28.5 3.7 34 255-288 58-91 (212)
266 PTZ00186 heat shock 70 kDa pre 26.2 1.6E+02 0.0035 31.5 6.5 51 103-155 336-386 (657)
267 PLN03184 chloroplast Hsp70; Pr 26.2 1.4E+02 0.0031 32.1 6.0 48 100-148 345-392 (673)
268 TIGR01991 HscA Fe-S protein as 25.6 1.5E+02 0.0032 31.3 6.0 47 101-148 293-339 (599)
269 PRK08313 acetyl-CoA acetyltran 25.3 90 0.002 30.9 4.1 43 103-149 257-301 (386)
270 PF02502 LacAB_rpiB: Ribose/Ga 24.9 2.3E+02 0.0051 24.2 6.1 100 58-180 12-112 (140)
271 PRK06365 acetyl-CoA acetyltran 24.9 54 0.0012 33.1 2.5 41 104-148 296-338 (430)
272 PTZ00009 heat shock 70 kDa pro 24.8 1.8E+02 0.0038 31.1 6.4 45 103-148 315-359 (653)
273 COG2519 GCD14 tRNA(1-methylade 24.6 48 0.001 31.4 1.9 31 263-293 84-114 (256)
274 cd03765 proteasome_beta_bacter 24.5 97 0.0021 28.8 3.9 33 96-128 167-199 (236)
275 PRK06157 acetyl-CoA acetyltran 24.4 59 0.0013 32.4 2.7 42 104-149 269-312 (398)
276 COG1153 FwdD Formylmethanofura 23.9 85 0.0019 26.4 3.0 53 255-315 30-87 (128)
277 TIGR00080 pimt protein-L-isoas 23.7 1E+02 0.0022 27.6 3.8 35 255-289 59-93 (215)
278 PRK13944 protein-L-isoaspartat 23.6 1.1E+02 0.0024 27.2 4.1 37 250-288 51-87 (205)
279 COG3473 Maleate cis-trans isom 23.6 3.2E+02 0.0069 25.5 6.9 71 104-177 54-128 (238)
280 PRK00290 dnaK molecular chaper 23.4 1.7E+02 0.0037 30.9 6.0 48 100-148 306-353 (627)
281 cd00827 init_cond_enzymes "ini 23.0 1.2E+02 0.0025 28.6 4.3 49 96-148 218-266 (324)
282 cd01445 TST_Repeats Thiosulfat 23.0 1.6E+02 0.0034 24.7 4.7 48 105-155 81-130 (138)
283 PLN03173 chalcone synthase; Pr 22.1 1.8E+02 0.0039 29.0 5.6 51 96-150 272-322 (391)
284 PTZ00400 DnaK-type molecular c 22.1 1.7E+02 0.0036 31.4 5.6 45 103-148 350-394 (663)
285 PF14451 Ub-Mut7C: Mut7-C ubiq 21.9 60 0.0013 25.2 1.7 25 106-130 34-58 (81)
286 PRK06260 threonine synthase; V 21.2 86 0.0019 31.2 3.1 39 254-292 336-374 (397)
287 PLN02569 threonine synthase 21.1 84 0.0018 32.5 3.0 41 254-294 407-447 (484)
288 PF05378 Hydant_A_N: Hydantoin 21.0 70 0.0015 28.2 2.2 29 102-130 38-66 (176)
289 TIGR02609 doc_partner putative 20.0 60 0.0013 24.5 1.3 36 246-284 2-37 (74)
No 1
>PLN02192 3-ketoacyl-CoA synthase
Probab=100.00 E-value=7e-75 Score=583.36 Aligned_cols=319 Identities=58% Similarity=0.968 Sum_probs=274.2
Q ss_pred ccchhhhhhhhHHhhhHHHHHHHHHHHHHHhhhcccCCCChhHHHHHHHhhhh---------------------------
Q 043382 3 VASVKWKVGYHYLISNAPHLLLVSLLGIVLIYDGFSTLSTLDDLLQFWNELSF--------------------------- 55 (329)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------- 55 (329)
|..||+|+||||+++|+++++++|++++++. ++.+++ +++++++|..+++
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 102 (511)
T PLN02192 26 VKLKYVKLGYHYLITHGMYLFLSPLVVVIAA--QLSTFS-IQDLHDLWEHLKFNLISVILCSTLLVFLSTLYFLTRPRPV 102 (511)
T ss_pred hhhhhhhhhhHHHHhhhHHHHHHHHHHHHHH--HHhhcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcE
Confidence 4468899999999999999999999988888 999999 8898888877653
Q ss_pred -hhhH------------------------------HHHHHHHHHHcCCCceEeccCCCCCCCCCchhHHHHHhhchHHHH
Q 043382 56 -KLNY------------------------------VTVLLKLLERSRIGNMTYGPKSLMDNPAENRHMKEAKKETDDVII 104 (329)
Q Consensus 56 -~~~~------------------------------~~~~~~I~~~sGI~~R~~~~~~~~~~pe~~~~ma~~~~ea~~l~~ 104 (329)
|||+ .++++||++|||+++++|+|+.++++| +..+|+++|+|++++++
T Consensus 103 ylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sglg~~t~~p~~~~~~~-~~~~~~~~~~Ea~~~~~ 181 (511)
T PLN02192 103 YLVDFSCYKPDDSRKCTRKIFMDRSKLTGSFTEENLEFQRKILERSGLGESTYLPEAVLNVP-PNPCMAEARKEAETVMF 181 (511)
T ss_pred EEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCcccCChhhccCC-CCccHHHHHHHHHHHHH
Confidence 2221 111189999999999999999999998 77899999999999999
Q ss_pred HHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCcceecccch-------------HHHhcCCCCeEE
Q 043382 105 GAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSYNLGAL-------------QSAQVQPNSYTL 171 (329)
Q Consensus 105 ~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~-------------~lL~a~~~~~aL 171 (329)
+|+++||+++|++|+|||+||++||+++++||++++|+|+|||++++.+||++|| ++|+++++++||
T Consensus 182 ~Aa~~aL~kaGi~p~DIDiLIv~~S~~~~~PSlaa~I~n~lGlr~~i~afdLsgmGCSggl~aLdlA~~lL~a~~~~~aL 261 (511)
T PLN02192 182 GAIDQLLAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNILSYNLGGMGCSAGLISIDLAKHLLQVHPNSYAL 261 (511)
T ss_pred HHHHHHHHHcCCCHHHCCEEEEECCCCCCCchHHHHHHHHhCCCCCceEEEcccchhhhHHHHHHHHHHHHHcCCCCeEE
Confidence 9999999999999999999999999999999999999999999989999999986 899999999999
Q ss_pred EEeecCCCCCccccCCCccccccccccc----------------------------------------------------
Q 043382 172 VVSTENITLGLYTGNDRSILRTTAYFVV---------------------------------------------------- 199 (329)
Q Consensus 172 VVs~E~~S~~~~~Gd~~sall~~~~~~~---------------------------------------------------- 199 (329)
|||+|++|.|||+|+++++++.||++|.
T Consensus 262 VVstE~~S~n~y~g~drs~lv~n~LFgDGAaAvLLs~~~~~~~~~k~~L~~~vrt~~~~dd~~~~~v~~~ed~~g~~g~~ 341 (511)
T PLN02192 262 VISMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNKRSDRRRSKYQLVHTVRTHKGADDKCFACVTQEEDSAGKIGVS 341 (511)
T ss_pred EEEEEeccccCCCCCCHHHHhccccccccceEEEEeccccccccccceeeeeEEEEecCChhhccceecccccccceeeE
Confidence 9999999998865555555555544211
Q ss_pred --------ccceeecccCCCCCccccccccceeeEeechHHHHHHHHhcc------------------------------
Q 043382 200 --------AGEALKTHITALGPLVLPVSEQLLFIATSVGRKIFKMKIKQY------------------------------ 241 (329)
Q Consensus 200 --------~g~aL~~di~~~Gp~vlP~se~~~~~~~~~grkv~~~~v~~~------------------------------ 241 (329)
++.++++++++.||.++|.+|+.++++++.|+++|+.+++++
T Consensus 342 Lskdl~~vag~al~~ni~~l~p~vlp~~e~~~~~~~m~gr~vfk~~~~~~~p~~~~~Idhf~iHqggr~IId~v~k~LgL 421 (511)
T PLN02192 342 LSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKLKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLQL 421 (511)
T ss_pred ecchhhhhhhhhhhhhhhhcccccCccchhhceeEEEcChHHHHHHhhhccHHHHHhhceEeeccCCHHHHHHHHHHcCC
Confidence 122334445556787889889888889999999988766543
Q ss_pred ------CccccccccCCCCcCcHHHHHHHHHHhCCCCCCCEEEEEeechhhhhhheeeeeeccCCCCCCCCCCCCccccc
Q 043382 242 ------PSRVTLYRFRNTSSSLVWYELAYAEAKRRIPKGDRICQIGFGAGFNCNTVVWPVLKTINLNPALDKNPWIDEID 315 (329)
Q Consensus 242 ------~sr~tl~~~GNtsSaSi~~~La~~~~kgrlk~GDrV~~iafGsGf~~~sav~r~~~~~~~~~~~~~~~w~~~~~ 315 (329)
+++++|++||||||+|+||+|++++++|++|+||+|||+|||+||+|++++|||+|++++ ..+.|||+||||
T Consensus 422 ~~~~~e~sr~tL~rfGNTSSaSI~~aL~~~eakgrik~GDrVl~iaFGsGf~~~sav~~~~~~~~~--~~~~~~w~~~i~ 499 (511)
T PLN02192 422 SDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKALRTVNP--AKEKNPWMDEIH 499 (511)
T ss_pred CchhhhHHHHHHhHcCChHHhHHHHHHHHHHHcCCCCCCCEEEEEEEcchHhhhhhheeeecccCC--cccCCCchhhHH
Confidence 345999999999999999999999999999999999999999999999999999999887 331499999999
Q ss_pred cCCCCCCCCCcC
Q 043382 316 DFPVQLPQFAPI 327 (329)
Q Consensus 316 ~~p~~~~~~~~~ 327 (329)
+|||++|.+..|
T Consensus 500 ~yp~~~~~~~~~ 511 (511)
T PLN02192 500 EFPVDVPKVSTI 511 (511)
T ss_pred hCCCCCCCCCCC
Confidence 999999988654
No 2
>PLN02854 3-ketoacyl-CoA synthase
Probab=100.00 E-value=2.8e-71 Score=558.36 Aligned_cols=316 Identities=49% Similarity=0.821 Sum_probs=265.3
Q ss_pred ccchhhhhhhhHHhhhH---HHHHHHHHHHHHHhhhcccCCCChhHHHHHHHh--hhh----------------------
Q 043382 3 VASVKWKVGYHYLISNA---PHLLLVSLLGIVLIYDGFSTLSTLDDLLQFWNE--LSF---------------------- 55 (329)
Q Consensus 3 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---------------------- 55 (329)
|..||||+||||+++|+ ++++++|++++++. ++++++ +++++++|.. +++
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (521)
T PLN02854 33 VKLKYVKLGYGYSCNPATILFFLIILPLTIATLV--QITGLE-FDTVSELWSNQALHLDTATRLTGSAFLLFLLGLYWAK 109 (521)
T ss_pred hcceeeecchHHHHhhhHHHHHHHHHHHHHHHHH--HHhcCC-HHHHHHHHHHhhhHHhHHHHHHHHHHHHHHHHHHHHc
Confidence 45688999999999999 67799999888888 999999 8998888887 443
Q ss_pred ------hhhH------------------------------HHHHHHHHHHcCCCceEeccCCCCCCCCCchhHHHHHhhc
Q 043382 56 ------KLNY------------------------------VTVLLKLLERSRIGNMTYGPKSLMDNPAENRHMKEAKKET 99 (329)
Q Consensus 56 ------~~~~------------------------------~~~~~~I~~~sGI~~R~~~~~~~~~~pe~~~~ma~~~~ea 99 (329)
|||+ .++++||++|||+++++|.|+.++++| +..+|+++|+|+
T Consensus 110 ~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sg~g~~ty~P~~~~~~~-~~~~~~~~r~ea 188 (521)
T PLN02854 110 RSKPVYLVDFACYKPEDERKISVDSFLTMTEENGSFEDETVQFQRRISTRSGLGDETYLPRGITSRP-PNLCMEEARAEA 188 (521)
T ss_pred CCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCccccCccccCCC-CcchHHHHHHHH
Confidence 1211 011189999999999999999999998 778999999999
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCcceecccch-------------HHHhcCC
Q 043382 100 DDVIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSYNLGAL-------------QSAQVQP 166 (329)
Q Consensus 100 ~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~-------------~lL~a~~ 166 (329)
+++++.|+++||+++|++|+|||+||++||.++++||+|++|+|+||+|+++.+||++|| +++++++
T Consensus 189 ~~v~~~~~~~lL~kaGi~p~dID~LIv~cS~~~p~PSlAa~I~n~LGlr~~i~afdLsgmGCSggl~aL~lA~~lL~~~~ 268 (521)
T PLN02854 189 EAVMFGALDSLFSKTGVKPRDIGILIVNCSLFNPTPSLSAMIVNHYKLRTDIKSYNLGGMGCSAGLISIDLANDLLKANP 268 (521)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCCCceEEecccchhhhHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999988899999999999999999999999999987 8999999
Q ss_pred CCeEEEEeecCCCCCccccCCCcccccccccccc----------------------------------------------
Q 043382 167 NSYTLVVSTENITLGLYTGNDRSILRTTAYFVVA---------------------------------------------- 200 (329)
Q Consensus 167 ~~~aLVVs~E~~S~~~~~Gd~~sall~~~~~~~~---------------------------------------------- 200 (329)
+++|||||+|++|.|||.|+++++++.+|+++.+
T Consensus 269 ~~~aLVVstE~~S~~~y~g~Drs~lv~~~LFgDGAAAvlLs~~~~~~~~~k~~L~~~v~t~~~ad~~~~~~i~~~~d~~G 348 (521)
T PLN02854 269 NSYAVVVSTENITLNWYFGNDRSMLLCNCIFRMGGAAVLLSNKARDRKRSKYQLVHTVRTHKGADDKNYNCVYQREDDKG 348 (521)
T ss_pred CCeEEEEEEeeeecCCCCCCchhhhcceeeeccceeEEEEecccccccccchheeeEEEEEEeeCCCccCeEEeccCCCC
Confidence 9999999999999888666666555444441110
Q ss_pred --------------cceeecccCCCCCccccccccc----------------------------eeeEeechHHHHHHHH
Q 043382 201 --------------GEALKTHITALGPLVLPVSEQL----------------------------LFIATSVGRKIFKMKI 238 (329)
Q Consensus 201 --------------g~aL~~di~~~Gp~vlP~se~~----------------------------~~~~~~~grkv~~~~v 238 (329)
+.+++.+++..||.++|.+|+. .|.+|+.|+++++...
T Consensus 349 ~~g~~lsk~l~~va~~~l~~~i~~~g~~Vl~~se~~~f~~~~i~~~L~~~gl~~~~pd~~~didhf~iHqggr~IId~v~ 428 (521)
T PLN02854 349 TIGVSLARELMAVAGDALKTNITTLGPLVLPLSEQFMFFVTLVRRKLLKAKVKPYIPDFKLAFEHFCIHAGGRAVLDELQ 428 (521)
T ss_pred cccccccccccchhhhhhhhhhhhccccccchHHHHHHHHHHHHHHHHHcCCCccCCcccccCcEEEECCCCHHHHHHHH
Confidence 0111122334566666655421 2467889999999887
Q ss_pred hcc--------CccccccccCCCCcCcHHHHHHHHHHhCCCCCCCEEEEEeechhhhhhheeeeeeccCCCCCCCCCCCC
Q 043382 239 KQY--------PSRVTLYRFRNTSSSLVWYELAYAEAKRRIPKGDRICQIGFGAGFNCNTVVWPVLKTINLNPALDKNPW 310 (329)
Q Consensus 239 ~~~--------~sr~tl~~~GNtsSaSi~~~La~~~~kgrlk~GDrV~~iafGsGf~~~sav~r~~~~~~~~~~~~~~~w 310 (329)
+.+ +++++++|||||||||+||+|++++++|++|+||+|||+|||+||+|++++|||+|++++.++. +|||
T Consensus 429 k~LgL~~~~~e~sr~tL~rfGNTSSASI~~~L~~~~~kGrik~GD~Vl~iaFGsGft~~sav~~~~~~~~~~~~~-~~~w 507 (521)
T PLN02854 429 KNLQLSDWHMEPSRMTLHRFGNTSSSSLWYELAYTEAKGRVSAGDRVWQIAFGSGFKCNSAVWKALREIPTGEST-GNPW 507 (521)
T ss_pred HHcCCCcccccchHHHhhhcCChHhhHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhhhheeeEEeccCCccccC-CCCc
Confidence 766 4569999999999999999999999999999999999999999999999999999998863124 6999
Q ss_pred ccccccCCCCCCC
Q 043382 311 IDEIDDFPVQLPQ 323 (329)
Q Consensus 311 ~~~~~~~p~~~~~ 323 (329)
+||||+|||++|+
T Consensus 508 ~~~i~~yp~~~~~ 520 (521)
T PLN02854 508 ADSIDRYPVKVPV 520 (521)
T ss_pred hhhHhhCCCCCCC
Confidence 9999999999975
No 3
>PLN02377 3-ketoacyl-CoA synthase
Probab=100.00 E-value=1.3e-69 Score=545.83 Aligned_cols=310 Identities=51% Similarity=0.814 Sum_probs=260.9
Q ss_pred ccchhhhhhhhHHhhhHHHHHHHHHHHHHHhhhcccCCCChhHHHHHHHhhhhhhhHHHH--------------------
Q 043382 3 VASVKWKVGYHYLISNAPHLLLVSLLGIVLIYDGFSTLSTLDDLLQFWNELSFKLNYVTV-------------------- 62 (329)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------- 62 (329)
|..||||+||||+++|+++++++|++++++. ++.+++ ++|++++|..+++ ++..+
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (502)
T PLN02377 22 VNLKYVKLGYHYLISNLLTLCFIPLIIIISI--EASQMN-PDDLRQLWIHLQY--NLVSIIICSAFLVFGLTVYIMTRPR 96 (502)
T ss_pred hhhhhhhhhhHHHHhhhHHHHHHHHHHHHHH--HHhhcC-HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 4468899999999999999999999988888 999999 8898888876554 22211
Q ss_pred ----------------------------------------HHHHHHHcCCCceEeccCCCCCCCCCchhHHHHHhhchHH
Q 043382 63 ----------------------------------------LLKLLERSRIGNMTYGPKSLMDNPAENRHMKEAKKETDDV 102 (329)
Q Consensus 63 ----------------------------------------~~~I~~~sGI~~R~~~~~~~~~~pe~~~~ma~~~~ea~~l 102 (329)
++||++++||++++|+|+..+++| +..+|+++|+|++++
T Consensus 97 ~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ri~~~sgig~~t~~p~~~~~~~-~~~~~~~~~~ea~~l 175 (502)
T PLN02377 97 PVYLVDYSCYRAPDHLKAPFARFMEHSRLTGDFDDSSLEFQRKILERSGLGEDTYVPEAMHYIP-PRPSMAAAREEAEQV 175 (502)
T ss_pred CEEEEeeeeecCCccccccHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCCCccccCchhccCC-ccchHHHHHHHHHHH
Confidence 189999999999999999999888 778999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCcceecccch-------------HHHhcCCCCe
Q 043382 103 IIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSYNLGAL-------------QSAQVQPNSY 169 (329)
Q Consensus 103 ~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~-------------~lL~a~~~~~ 169 (329)
+++|+++||+++|++|+|||+||++||.++++||+|++|+|+||||+++.+||++|| ++++++++++
T Consensus 176 ~~~A~~~aL~kaGi~p~dID~LVv~cS~~~~~PSlaa~V~~~LGlr~~v~afdL~gmGCsggl~aL~lA~~ll~~~~~~~ 255 (502)
T PLN02377 176 MFGALDNLFANTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAVDLAKDMLQVHRNTY 255 (502)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhCCCCCCeEEecccchhhHHHHHHHHHHHHHHcCCCCE
Confidence 999999999999999999999999888899999999999999999999999999986 8999999999
Q ss_pred EEEEeecCCCCCccccCCCcccccccccccc-------------------------------------------------
Q 043382 170 TLVVSTENITLGLYTGNDRSILRTTAYFVVA------------------------------------------------- 200 (329)
Q Consensus 170 aLVVs~E~~S~~~~~Gd~~sall~~~~~~~~------------------------------------------------- 200 (329)
|||||+|++|.+|++||.+++++.||+++.+
T Consensus 256 aLVVstE~~S~~~~~~d~~s~lv~n~LFgDGAaAvlLs~~~~~~~~a~~~l~~iv~t~~~~d~~~~~~i~~~~d~~G~~g 335 (502)
T PLN02377 256 AVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKSRDKRRSKYKLVHVVRTHRGADDKAFRCVYQEQDDAGKTG 335 (502)
T ss_pred EEEEEEeccccccCCCCCccccccceeeccccEEEEEecccccccccccccceEEEEEEEEcCCccceeeeccccCCCCC
Confidence 9999999999877555555554444441110
Q ss_pred -----------cceeecccCCCCCcccccccc---------------------------c-eeeEeechHHHHHHHHhcc
Q 043382 201 -----------GEALKTHITALGPLVLPVSEQ---------------------------L-LFIATSVGRKIFKMKIKQY 241 (329)
Q Consensus 201 -----------g~aL~~di~~~Gp~vlP~se~---------------------------~-~~~~~~~grkv~~~~v~~~ 241 (329)
+.+++.+++..||.++|.+|| . .|.+|+.|+++++...+.+
T Consensus 336 ~~ls~dl~~v~g~~l~~~i~~lg~~vl~~se~~~~~a~~~~~~~~~~~l~~~~p~~~~didhf~iHqggr~IId~v~k~L 415 (502)
T PLN02377 336 VSLSKDLMAIAGEALKTNITTLGPLVLPISEQLLFFATLVVKKLFNKKMKPYIPDFKLAFDHFCIHAGGRAVIDELEKNL 415 (502)
T ss_pred CCCCcchhhHhhHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhhccCCcHhhcCEEEECCCCHHHHHHHHHHc
Confidence 011111223345656664321 1 2567899999999877765
Q ss_pred --------CccccccccCCCCcCcHHHHHHHHHHhCCCCCCCEEEEEeechhhhhhheeeeeeccCCCCCCCCCCCCccc
Q 043382 242 --------PSRVTLYRFRNTSSSLVWYELAYAEAKRRIPKGDRICQIGFGAGFNCNTVVWPVLKTINLNPALDKNPWIDE 313 (329)
Q Consensus 242 --------~sr~tl~~~GNtsSaSi~~~La~~~~kgrlk~GDrV~~iafGsGf~~~sav~r~~~~~~~~~~~~~~~w~~~ 313 (329)
++++++++||||||||+||+|++++++|++++||+|||+|||+||+|++++|||+|++++ +. +|||+||
T Consensus 416 gL~~~~~e~sr~tL~r~GNTSSaSI~~aL~~~~~~grik~Gd~VlliaFGsGf~~~s~v~~~~~~~~~--~~-~~~w~~~ 492 (502)
T PLN02377 416 QLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMRKGNRVWQIAFGSGFKCNSAVWEALRHVKP--SN-NSPWEDC 492 (502)
T ss_pred CCCcccchHHHHHHHhcCCchhhHHHHHHHHHHHcCCCCCCCeEEEEEEccccEeeeEEEEEecCCCC--CC-CCCchhh
Confidence 456999999999999999999999999999999999999999999999999999999887 44 6999999
Q ss_pred cccCCCCC
Q 043382 314 IDDFPVQL 321 (329)
Q Consensus 314 ~~~~p~~~ 321 (329)
||+|||++
T Consensus 493 i~~yp~~~ 500 (502)
T PLN02377 493 IDKYPVKL 500 (502)
T ss_pred HhhCCCcc
Confidence 99999975
No 4
>PLN02932 3-ketoacyl-CoA synthase
Probab=100.00 E-value=1.3e-67 Score=528.48 Aligned_cols=304 Identities=47% Similarity=0.767 Sum_probs=250.9
Q ss_pred hhHHhhhHHHHHHHHHHHHHHhhhcccCCCChhHHHHHHHhhh----------------------------hhhhH----
Q 043382 12 YHYLISNAPHLLLVSLLGIVLIYDGFSTLSTLDDLLQFWNELS----------------------------FKLNY---- 59 (329)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~---- 59 (329)
+.|+++|+++++++|++++++. ++.+++ .++++.+|..++ ||||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyl~d~~c~~ 77 (478)
T PLN02932 1 FNYLMAHRFKLCFLPLMVGIAM--EASRLS-TQDLQNFYLYLQNNLTSLTMFFLYLALGSTLYLMTRPKPVYLVDFSCYL 77 (478)
T ss_pred ChhHHHhHHHHHHHHHHHHHHH--HHhhcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeeeec
Confidence 3589999999999999988888 899998 888777776543 22221
Q ss_pred --------------------------------HHHHHHHHHHcCCCceEeccCCCCCCCCCchhHHHHHhhchHHHHHHH
Q 043382 60 --------------------------------VTVLLKLLERSRIGNMTYGPKSLMDNPAENRHMKEAKKETDDVIIGAI 107 (329)
Q Consensus 60 --------------------------------~~~~~~I~~~sGI~~R~~~~~~~~~~pe~~~~ma~~~~ea~~l~~~Aa 107 (329)
.++++||++||||++|+|+|+..++.| +..+|+++|+|+++++++|+
T Consensus 78 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~i~~rsGig~~t~~p~~~~~~~-~~~~~~~~~~ea~~la~~Aa 156 (478)
T PLN02932 78 PPSHLKASIQTIMGHVRRVREAGAWKQESDYLMDFCEKILERSGLGQETYIPEGLQCLP-LQQNLAVSRKETEEVIIGAV 156 (478)
T ss_pred CcccccccHHHHHHHHHhhcccCCCCccchhHHHHHHHHHHHcCCCCceeeccccccCC-HHHHHHHHHHHHHHHHHHHH
Confidence 122378999999999999999988888 88899999999999999999
Q ss_pred HHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCcceecccch-------------HHHhcCCCCeEEEEe
Q 043382 108 DERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSYNLGAL-------------QSAQVQPNSYTLVVS 174 (329)
Q Consensus 108 ~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~-------------~lL~a~~~~~aLVVs 174 (329)
++||+++|++|+|||+||++||+++++||++++|+++||||+++.+||++|| ++++++++++|||||
T Consensus 157 ~~aL~~agi~p~dId~lIv~tst~~~~Pslaa~V~~~lGlr~~i~~fdL~gmGCSggl~aL~lA~~ll~~~~~~~aLVVs 236 (478)
T PLN02932 157 DNLFRNTGISPSDIGILVVNSSTFNPTPSLSSILVNKFKLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQVHRNTYALVVS 236 (478)
T ss_pred HHHHHHcCCCHHHCCEEEEEccCCCCCCcHHHHHHHHhCCCCCceEEEeccchhhhHHHHHHHHHHHHHcCCCCeEEEEE
Confidence 9999999999999999999999999999999999999999989999999987 899999999999999
Q ss_pred ecCCCCCccccCCCcccccccccc--------------------------------------------------------
Q 043382 175 TENITLGLYTGNDRSILRTTAYFV-------------------------------------------------------- 198 (329)
Q Consensus 175 ~E~~S~~~~~Gd~~sall~~~~~~-------------------------------------------------------- 198 (329)
+|++|.+|+.||++++++++|+++
T Consensus 237 tE~~S~~~~~~d~r~~l~t~~LFgDGAAAvlLs~~~~~~~~~~~~L~~~v~t~~~ad~~~~~~v~~~~d~~G~~g~~Lsk 316 (478)
T PLN02932 237 TENITQNLYLGNNKSMLVTNCLFRIGGAAILLSNRSRDRKRAKYELVHTVRVHTGADDRSYECATQEEDEDGIVGVSLSK 316 (478)
T ss_pred EeecccccCCCcchhhhccceeecccceEEEEecccccccCcceEEEeeeeeeeccCCCccccceeecccCCcceeeECc
Confidence 999997764444443333333311
Q ss_pred ----cccceeecccCCCCCcccccccccee----------------------------eEeechHHHHHHHHhcc-----
Q 043382 199 ----VAGEALKTHITALGPLVLPVSEQLLF----------------------------IATSVGRKIFKMKIKQY----- 241 (329)
Q Consensus 199 ----~~g~aL~~di~~~Gp~vlP~se~~~~----------------------------~~~~~grkv~~~~v~~~----- 241 (329)
+++++++.|+++.||.++|.+|+.++ .+|+.|+++++...+.+
T Consensus 317 ~lp~~~~~al~~ni~~~~p~v~p~~e~~~~~~~~~~~~~~k~~~~~~~~~~~~~id~f~iHqggr~IIdav~k~LgL~~~ 396 (478)
T PLN02932 317 NLPMVAARTLKINIATLGPLVLPLSEKFHFFVRFVKKKFFNPKLKHYIPDFKLAFEHFCIHAGGRALIDEMEKNLHLTPL 396 (478)
T ss_pred cchHHHHHHHhhhhhccccccccchhhhHHHHHHhHHHHHHHHhhcCcHhHHhhhceEEEccCCHHHHHHHHHHcCCChH
Confidence 01122333455667888887665443 34555555555554443
Q ss_pred ---CccccccccCCCCcCcHHHHHHHHHHhCCCCCCCEEEEEeechhhhhhheeeeeeccCCCCCCCCCCCCccccccCC
Q 043382 242 ---PSRVTLYRFRNTSSSLVWYELAYAEAKRRIPKGDRICQIGFGAGFNCNTVVWPVLKTINLNPALDKNPWIDEIDDFP 318 (329)
Q Consensus 242 ---~sr~tl~~~GNtsSaSi~~~La~~~~kgrlk~GDrV~~iafGsGf~~~sav~r~~~~~~~~~~~~~~~w~~~~~~~p 318 (329)
+++++|+|||||||+|+||+|++.+++|++|+||+|||+|||+||+||++|||++|++++ .. +|||+||||+||
T Consensus 397 ~~e~s~~tL~rfGNTSSaSI~~~L~~~ea~grik~Gd~vl~iaFGsGf~~~s~vw~~~~~~~~--~~-~~~w~~~i~~yp 473 (478)
T PLN02932 397 DVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMKKGDRIWQIALGSGFKCNSSVWVALRNVKP--SA-NNPWEDCLHKYP 473 (478)
T ss_pred HHHHHHHHHHHhCChhhhHHHHHHHHHHHcCCCCCCCEEEEEEEeccHHHHHHHHHHhcCCCC--cC-CCCchhhHhhCC
Confidence 456999999999999999999999999999999999999999999999999999999887 44 699999999999
Q ss_pred CCCC
Q 043382 319 VQLP 322 (329)
Q Consensus 319 ~~~~ 322 (329)
|++.
T Consensus 474 ~~~~ 477 (478)
T PLN02932 474 VEID 477 (478)
T ss_pred CCCC
Confidence 9763
No 5
>PLN00415 3-ketoacyl-CoA synthase
Probab=100.00 E-value=3.6e-58 Score=456.66 Aligned_cols=261 Identities=45% Similarity=0.815 Sum_probs=224.0
Q ss_pred HHHHHHHHHHcCCCceEeccCCCCCCCCCchhHHHHHhhchHHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHH
Q 043382 60 VTVLLKLLERSRIGNMTYGPKSLMDNPAENRHMKEAKKETDDVIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSA 139 (329)
Q Consensus 60 ~~~~~~I~~~sGI~~R~~~~~~~~~~pe~~~~ma~~~~ea~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa 139 (329)
.+++.+|.++|||++++|.|+..++.| +..+|+++|+|+++++++|+++||+++|++|+|||+||++|+.++++|++++
T Consensus 96 ~~F~~~i~~rSGlg~et~~p~~~~~~~-~~~~~~~~~~e~em~i~~A~~~aL~~aGi~p~dID~LIvs~T~~~~~Pslaa 174 (466)
T PLN00415 96 IQFMTRILNRSGLGDDTYSPRCMLTSP-PTPSMYEARHESELVIFGALNSLFKKTGIEPREVGIFIVNCSLFNPNPSLSS 174 (466)
T ss_pred HHHHHHHHHHcCCCCCeeeCCccccCC-CCCChhhhHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCCCCchHHH
Confidence 355699999999999999999988877 6779999999999999999999999999999999999998877889999999
Q ss_pred HHHHHcCCCCCcceecccch-------------HHHhcCCCCeEEEEeecCCCCCc-------------cccCCCccc-c
Q 043382 140 FIVNHYKLRSNILSYNLGAL-------------QSAQVQPNSYTLVVSTENITLGL-------------YTGNDRSIL-R 192 (329)
Q Consensus 140 ~I~~~Lglr~~v~~~dl~g~-------------~lL~a~~~~~aLVVs~E~~S~~~-------------~~Gd~~sal-l 192 (329)
+|+++||+++++.+||+++| ++++++++++||||++|++|.+| +|||+++|+ |
T Consensus 175 ~l~~~LGLr~~v~~~dL~gmGCsggv~aL~lA~~ll~a~~~~~aLVVs~E~~S~~~~~~~dr~~lv~n~LFgDGAAAvlL 254 (466)
T PLN00415 175 MIVNRYKLKTDVKTYNLSGMGCSAGAISVDLATNLLKANPNTYAVIVSTENMTLSMYRGNDRSMLVPNCLFRVGGAAVML 254 (466)
T ss_pred HHHHHhCCCCCceEEEeccccchHHHHHHHHHHHHHHhCCCCEEEEEEEecccccccCCCcHhHhccceeecccceEEEE
Confidence 99999999999999999996 89999999999999999999654 688888776 5
Q ss_pred cccc----------------------------------cc------------cccceeecccCCCCCccccccccc----
Q 043382 193 TTAY----------------------------------FV------------VAGEALKTHITALGPLVLPVSEQL---- 222 (329)
Q Consensus 193 ~~~~----------------------------------~~------------~~g~aL~~di~~~Gp~vlP~se~~---- 222 (329)
++.. .| +++++++.|+++++|.++|.+||.
T Consensus 255 s~~~~~~~~~~~~L~~~vrt~~~~~d~~~~~~~~~~d~~G~~gv~Lsk~lp~va~~~l~~ni~~l~p~vlp~~e~~~~~~ 334 (466)
T PLN00415 255 SNRSQDRVRSKYELTHIVRTHKGSSDKHYTCAEQKEDSKGIVGVALSKELTVVAGDTLKTNLTALGPLVLPLSEKLRFIL 334 (466)
T ss_pred ecCcccccCccceeeeEEEecCCCChhhhcceeeeecCCCcceEEEChHHHHHHHHHHHHHHHHhhhhccchHHHHHHHH
Confidence 5510 01 122334445566788888877632
Q ss_pred ------------------------eeeEeechHHHHHHHHhcc--------CccccccccCCCCcCcHHHHHHHHHHhCC
Q 043382 223 ------------------------LFIATSVGRKIFKMKIKQY--------PSRVTLYRFRNTSSSLVWYELAYAEAKRR 270 (329)
Q Consensus 223 ------------------------~~~~~~~grkv~~~~v~~~--------~sr~tl~~~GNtsSaSi~~~La~~~~kgr 270 (329)
.|.+|..||+|++...+.+ +||++|+|||||||+|+||+|+|++++|+
T Consensus 335 ~~i~~~~~~~~~~~~~pd~~~~~~hf~iHpGGraVLdave~~LgL~~~~le~Sr~vL~r~GN~SSsSV~yvL~~~~~~~~ 414 (466)
T PLN00415 335 FLVKSKLFRLKVSPYVPDFKLCFKHFCIHAGGRALLDAVEKGLGLSEFDLEPSRMTLHRFGNTSSSSLWYELAYVEAKCR 414 (466)
T ss_pred HHHhhhhhhccCCCCCCCccccceeEEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhhHHHHHHHHHhhcc
Confidence 1457899999999877765 78899999999999999999999999999
Q ss_pred CCCCCEEEEEeechhhhhhheeeeeeccCCCCCCCCCCCCccccccCCCCC
Q 043382 271 IPKGDRICQIGFGAGFNCNTVVWPVLKTINLNPALDKNPWIDEIDDFPVQL 321 (329)
Q Consensus 271 lk~GDrV~~iafGsGf~~~sav~r~~~~~~~~~~~~~~~w~~~~~~~p~~~ 321 (329)
+++||++||+|||+||+|+++||||+|++++.....+|||+||||+|||++
T Consensus 415 ~~~Gdrvl~iaFGpGf~~es~v~~~~~~~~~~~~~~~~~w~~~i~~yp~~~ 465 (466)
T PLN00415 415 VKRGDRVWQLAFGSGFKCNSIVWRALRTIPANESLVGNPWGDSVHKYPVHV 465 (466)
T ss_pred CCCCCEEEEEEEcCcchhhHhHHHHhccCCcccccCCCCchhhHHhCCCCC
Confidence 999999999999999999999999999987621101499999999999975
No 6
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=100.00 E-value=6.7e-41 Score=321.15 Aligned_cols=217 Identities=19% Similarity=0.232 Sum_probs=184.1
Q ss_pred HHHHHHcCCCceEeccCCCCCCCCCchhHHHHHhhchHHHHHHHHHHHHhcCCCCCCcCEEEEeccC-CCCCCchHHHHH
Q 043382 64 LKLLERSRIGNMTYGPKSLMDNPAENRHMKEAKKETDDVIIGAIDERLAKTGFKHKDIGILVVNSSL-FNPTPSLSAFIV 142 (329)
Q Consensus 64 ~~I~~~sGI~~R~~~~~~~~~~pe~~~~ma~~~~ea~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~-~~~~Ps~aa~I~ 142 (329)
+||..++||++||++.++ |..++|+ ++|+++||+++|++|+|||+||++|++ +++.|++|++||
T Consensus 32 ewI~~rtGir~R~~a~~~-----e~~s~la----------~~Aa~~AL~~Agi~~~dIDlII~aT~tpd~~~Ps~A~~vq 96 (323)
T COG0332 32 EWIETRTGIRERRIAADD-----ETTSDLA----------VEAARKALEDAGISPDDIDLIIVATSTPDHLFPSTACLVQ 96 (323)
T ss_pred ceeeeecCCceeeecCCC-----ccHHHHH----------HHHHHHHHHHcCCCHHHCCEEEEEcCCcccCCChHHHHHH
Confidence 999999999999999887 6888999 999999999999999999999999988 789999999999
Q ss_pred HHcCCCCCcceecccch------------HHHhcCCCCeEEEEeecCCCC--Cc-------cccCCCccc-ccccc--cc
Q 043382 143 NHYKLRSNILSYNLGAL------------QSAQVQPNSYTLVVSTENITL--GL-------YTGNDRSIL-RTTAY--FV 198 (329)
Q Consensus 143 ~~Lglr~~v~~~dl~g~------------~lL~a~~~~~aLVVs~E~~S~--~~-------~~Gd~~sal-l~~~~--~~ 198 (329)
++||+. ++.+||++.+ +|+++|.++++|||++|.+|+ || +|||+++++ |+.+. .+
T Consensus 97 ~~LG~~-~~~afDl~aaCsgf~yaL~~A~~~i~sG~~k~vLVVg~e~~S~~ld~~dR~t~vlFgDGAgAvvl~~~~~~~~ 175 (323)
T COG0332 97 ARLGLG-GAPAFDLQAACSGFLYALSVADGLIRSGGYKNVLVVGAETLSRILDWTDRDTCVLFGDGAGAVVLEATEDDNG 175 (323)
T ss_pred HHhCCC-CcceeechhhhHHHHHHHHHHHHHHHcCCCCEEEEEehhHhhccCCHhhccceEEEcCCceEEEEecCCCCcC
Confidence 999998 5999999987 799999999999999999983 33 999999998 66552 35
Q ss_pred cccceeecccCCCCCcccccc------ccce-eeEeechHHHHHHHHhcc------------------------------
Q 043382 199 VAGEALKTHITALGPLVLPVS------EQLL-FIATSVGRKIFKMKIKQY------------------------------ 241 (329)
Q Consensus 199 ~~g~aL~~di~~~Gp~vlP~s------e~~~-~~~~~~grkv~~~~v~~~------------------------------ 241 (329)
+....+.+|-.....+..|.. ++.. .++.|.||+||+++++.+
T Consensus 176 i~~~~l~sdg~~~~~l~~~~~~~~~~~~~~~~~~~~m~Gr~vfk~av~~~~~~~~~~L~~~~l~~~dId~~vpHQan~ri 255 (323)
T COG0332 176 ILDTDLGSDGSQGDLLYLPGGGSATPKEESGGGLLVMDGREVFKFAVRAMPKAIEEVLEKAGLTPEDIDWFVPHQANLRI 255 (323)
T ss_pred eeeeeeeccccCCCeeeccCCCCccccccccccceeeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEccccccHHH
Confidence 556666666222211111211 1222 568899999999876543
Q ss_pred -----------Ccc--ccccccCCCCcCcHHHHHHHHHHhCCCCCCCEEEEEeechhhhhhheeeeee
Q 043382 242 -----------PSR--VTLYRFRNTSSSLVWYELAYAEAKRRIPKGDRICQIGFGAGFNCNTVVWPVL 296 (329)
Q Consensus 242 -----------~sr--~tl~~~GNtsSaSi~~~La~~~~kgrlk~GDrV~~iafGsGf~~~sav~r~~ 296 (329)
++| .++++||||||+|+|+.|+++.++|++|+||++++.+||+|++|+++++||.
T Consensus 256 ~~~i~~~l~~~~~k~~~~~~~yGNtsaAsiplaL~~~~~~g~ik~Gd~ill~~fG~Gltwg~~~~r~~ 323 (323)
T COG0332 256 IEAIAKKLGIPEEKVVVTVDKYGNTSAASIPLALDEALREGRIKPGDLVLLEAFGGGLTWGAALVRWG 323 (323)
T ss_pred HHHHHHHcCCCHHHHhhHHHHhcccccchHHHHHHHHhhhCCCCCCCEEEEEeecCcceeeeEEEEeC
Confidence 234 7899999999999999999999999999999999999999999999999983
No 7
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=100.00 E-value=2.6e-41 Score=317.57 Aligned_cols=174 Identities=55% Similarity=0.820 Sum_probs=162.4
Q ss_pred HHHHHHHHHHHcCCCceEeccCCCCCCCCCchhHHHHHhhchHHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchH
Q 043382 59 YVTVLLKLLERSRIGNMTYGPKSLMDNPAENRHMKEAKKETDDVIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLS 138 (329)
Q Consensus 59 ~~~~~~~I~~~sGI~~R~~~~~~~~~~pe~~~~ma~~~~ea~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~a 138 (329)
-.++++||++++|+++|+|+|+..++.| +..+|.++|+|++++++.|++++|+|+|++|+|||+||+|||+|+|+||++
T Consensus 44 sl~F~~kIlerSGlG~eTy~P~~~~~~p-~~~s~~~a~~Eae~v~f~av~~LL~ktgv~p~dIdiLVvncs~f~ptPSLs 122 (290)
T PF08392_consen 44 SLDFQRKILERSGLGDETYLPPALHEIP-PDPSLAAAREEAEMVIFGAVDDLLAKTGVKPSDIDILVVNCSLFNPTPSLS 122 (290)
T ss_pred HHHHHHHHHHhcCCCccccCCcccccCC-CcccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCCcCCcHH
Confidence 3466799999999999999999999888 779999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcceecccch-------------HHHhcCCCCeEEEEeecCCCCCccccCCCcccccccc---------
Q 043382 139 AFIVNHYKLRSNILSYNLGAL-------------QSAQVQPNSYTLVVSTENITLGLYTGNDRSILRTTAY--------- 196 (329)
Q Consensus 139 a~I~~~Lglr~~v~~~dl~g~-------------~lL~a~~~~~aLVVs~E~~S~~~~~Gd~~sall~~~~--------- 196 (329)
+||+|+||||+++++||++|| ++|+++|+++||||++|++|.+||.||+++|+++||+
T Consensus 123 amIvnr~~mr~di~~~nLsGMGCsAgliai~lA~~lL~~~p~~~ALVVstE~~s~~~Y~G~~rsmlv~NcLFr~GgAAvL 202 (290)
T PF08392_consen 123 AMIVNRYGMRSDIKSYNLSGMGCSAGLIAIDLAKDLLQAHPNSYALVVSTENISANWYRGNDRSMLVSNCLFRMGGAAVL 202 (290)
T ss_pred HHHHHHhCCCcCeeeecccCCcchhhHHHHHHHHHHHHhCCCcEEEEEEEeecccccccCCcHHHhhccccccCCceeEE
Confidence 999999999999999999999 8999999999999999999999999999999999997
Q ss_pred ---------------------------------------------------cccccceeecccCCCCCccccccccceee
Q 043382 197 ---------------------------------------------------FVVAGEALKTHITALGPLVLPVSEQLLFI 225 (329)
Q Consensus 197 ---------------------------------------------------~~~~g~aL~~di~~~Gp~vlP~se~~~~~ 225 (329)
+.++|.+|+.||+++||+++|++||++|.
T Consensus 203 LSn~~~~~~~aky~L~~~vRt~~g~~d~ay~~v~q~eD~~g~~Gv~lsk~l~~vag~al~~ni~~l~p~vLP~sE~~~~~ 282 (290)
T PF08392_consen 203 LSNKPSDRRRAKYELLHTVRTHTGADDDAYRCVFQEEDEEGIVGVSLSKDLMKVAGKALKANITTLGPLVLPLSEQLRFA 282 (290)
T ss_pred eecCccccccchhhhhheeeeecCCCCCceeeEEEeEcCCCceEEEEecchHHHHHHHHHHHHHHhccccCCHHHHHHHH
Confidence 22567888889999999999999999988
Q ss_pred EeechHHH
Q 043382 226 ATSVGRKI 233 (329)
Q Consensus 226 ~~~~grkv 233 (329)
+.+..||+
T Consensus 283 ~~~~~rk~ 290 (290)
T PF08392_consen 283 ASFIARKV 290 (290)
T ss_pred HHHHHhhC
Confidence 77766663
No 8
>PLN03168 chalcone synthase; Provisional
Probab=100.00 E-value=6.2e-34 Score=280.87 Aligned_cols=255 Identities=16% Similarity=0.190 Sum_probs=187.2
Q ss_pred hhHHHHHHHhhh---hhhhHHHHHHHHHHHcCCCceEecc-CCC-CC--------CCCCchhHHHHHhhchHHHHHHHHH
Q 043382 43 LDDLLQFWNELS---FKLNYVTVLLKLLERSRIGNMTYGP-KSL-MD--------NPAENRHMKEAKKETDDVIIGAIDE 109 (329)
Q Consensus 43 ~~~~~~~~~~~~---~~~~~~~~~~~I~~~sGI~~R~~~~-~~~-~~--------~pe~~~~ma~~~~ea~~l~~~Aa~~ 109 (329)
++++..+...+. ...++.+.+.+|.+++||++||.+- ++. .. .|.....+..+.+++.+|+.+|+++
T Consensus 32 q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~ps~~~r~~~~~~~a~~La~~Aa~~ 111 (389)
T PLN03168 32 QSEYPDFFFNITNCGEKEALKAKFKRICDKSGIRKRHMFLTEEVLKANPGICTYMEPSLNVRHDIVVVQVPKLAAEAAQK 111 (389)
T ss_pred HHHHHHHHHHhccccCcHHHHHHHHHHHHhcCCCeeeeeccccchhhCcccccccCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 555554443321 2225666789999999999999863 211 00 1112445678889999999999999
Q ss_pred HHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCcc-eecccch------------HHHhcCCCCeEEEEeec
Q 043382 110 RLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNIL-SYNLGAL------------QSAQVQPNSYTLVVSTE 176 (329)
Q Consensus 110 aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~-~~dl~g~------------~lL~a~~~~~aLVVs~E 176 (329)
||+++|++|+|||+||++|++++.+|+++++|+++||+++++. ++|++.+ +++++++.++||||++|
T Consensus 112 AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~~gC~g~~~aL~~A~~~i~~~~~~~VLVV~~E 191 (389)
T PLN03168 112 AIKEWGGRKSDITHIVFATTSGVNMPGADHALAKLLGLKPTVKRVMMYQTGCFGGASVLRVAKDLAENNKGARVLAVASE 191 (389)
T ss_pred HHHHcCCCHHHCCEEEEECCCCCCCccHHHHHHHHhCcCCcceeeeeeCCccHHHHHHHHHHHHHHHhCCCCEEEEEEEe
Confidence 9999999999999999999997779999999999999997664 7887765 88999999999999999
Q ss_pred CCCCC---------------ccccCCCccc-cccccc-----cccc-----ceee--c------ccCCCCC-cc----cc
Q 043382 177 NITLG---------------LYTGNDRSIL-RTTAYF-----VVAG-----EALK--T------HITALGP-LV----LP 217 (329)
Q Consensus 177 ~~S~~---------------~~~Gd~~sal-l~~~~~-----~~~g-----~aL~--~------di~~~Gp-~v----lP 217 (329)
.+|.+ .+|||+++++ |++... ++.. +.+. + ++...|. .. .|
T Consensus 192 ~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvvl~~~~~~~~~~~~~~~~~~~~~~~p~s~~~~~~~~~~~g~~~~l~~~vp 271 (389)
T PLN03168 192 VTAVTYRAPSENHLDGLVGSALFGDGAGVYVVGSDPKPEVEKALFEVHWAGETILPESDGAIDGHLTEAGLIFHLMKDVP 271 (389)
T ss_pred hhhhhccCcccccHHHHhccccccCccEEEEEecCCCCccCCcceEEEeeeeEEEcCCCCccCceEecCceEEEECHHHH
Confidence 99843 2799999988 654210 0000 0000 0 0111111 00 00
Q ss_pred -------------------c-ccc-ceeeEeechHHHHHHHHhcc--------CccccccccCCCCcCcHHHHHHHHHHh
Q 043382 218 -------------------V-SEQ-LLFIATSVGRKIFKMKIKQY--------PSRVTLYRFRNTSSSLVWYELAYAEAK 268 (329)
Q Consensus 218 -------------------~-se~-~~~~~~~~grkv~~~~v~~~--------~sr~tl~~~GNtsSaSi~~~La~~~~k 268 (329)
. ..+ ..+.+|+.|+++++...+.+ .+|.+|++||||||+|+|++|+++.++
T Consensus 272 ~~i~~~~~~~l~~~l~~~~~~~~d~~~~v~Hqgg~~Il~~v~~~Lgl~~ek~~~s~~vl~~yGNtSSaSv~~vL~~~~~~ 351 (389)
T PLN03168 272 GLISKNIEKFLNEARKCVGSPDWNEMFWAVHPGGPAILDQVEAKLKLTKDKMQGSRDILSEFGNMSSASVLFVLDQIRQR 351 (389)
T ss_pred HHHHHHHHHHHHHHHHhcCCCccccceEEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHhhhHHHHHHHHHHH
Confidence 0 001 12568999999999888876 234579999999999999999999876
Q ss_pred CCCCCC--------CEEEEEeechhhhhhheeeeeecc
Q 043382 269 RRIPKG--------DRICQIGFGAGFNCNTVVWPVLKT 298 (329)
Q Consensus 269 grlk~G--------DrV~~iafGsGf~~~sav~r~~~~ 298 (329)
++++| |+++++|||+||+|+++++||..+
T Consensus 352 -~~~~g~~~~~~g~~~~ll~afGpG~t~~~~llr~~~~ 388 (389)
T PLN03168 352 -SVKMGASTLGEGSEFGFFIGFGPGLTLEVLVLRAAAN 388 (389)
T ss_pred -HhhcCCCCCCCCccEEEEEEEcchhhhhhhhheeccc
Confidence 66665 899999999999999999999543
No 9
>PLN03172 chalcone synthase family protein; Provisional
Probab=100.00 E-value=2.4e-32 Score=269.87 Aligned_cols=254 Identities=16% Similarity=0.181 Sum_probs=186.6
Q ss_pred hhHHHHHHHhhh---hhhhHHHHHHHHHHHcCCCceEeccC-CC---C---C---CCCCchhHHHHHhhchHHHHHHHHH
Q 043382 43 LDDLLQFWNELS---FKLNYVTVLLKLLERSRIGNMTYGPK-SL---M---D---NPAENRHMKEAKKETDDVIIGAIDE 109 (329)
Q Consensus 43 ~~~~~~~~~~~~---~~~~~~~~~~~I~~~sGI~~R~~~~~-~~---~---~---~pe~~~~ma~~~~ea~~l~~~Aa~~ 109 (329)
++++..++..+- .+.++...+.+|.+++||++||.+-+ +. + . .|.....+..+.+++.+|+.+|+++
T Consensus 33 q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~a~~La~~Aa~~ 112 (393)
T PLN03172 33 QADYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMHLTEEILKENPNMCAYMAPSLDARQDMVVVEVPKLGKEAAAK 112 (393)
T ss_pred HHHHHHHHHHHhcccCchHHHHHHHHHHHhcCCCceeEeccchhhhhCccccccCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 666655554321 22345566788999999999998742 11 0 0 1213445678888999999999999
Q ss_pred HHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCccee-cccch------------HHHhcCCCCeEEEEeec
Q 043382 110 RLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSY-NLGAL------------QSAQVQPNSYTLVVSTE 176 (329)
Q Consensus 110 aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~-dl~g~------------~lL~a~~~~~aLVVs~E 176 (329)
||+++|++++|||+||++|++...+|+++++|+++||+++++.++ +++.+ +++++++.++||||++|
T Consensus 113 aL~~ag~~~~dId~ii~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~~~~~~~vLVV~~E 192 (393)
T PLN03172 113 AIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRFMMYQQGCFAGGTVLRLAKDLAENNAGSRVLVVCSE 192 (393)
T ss_pred HHHHcCCCHHHCCEEEEEccCCCcCchHHHHHHHHhCCCCCceEEeeeCCchHHHHHHHHHHHHHHHcCCCCeEEEEEEe
Confidence 999999999999999999988766999999999999999888664 54443 88999999999999999
Q ss_pred CCCCC---------------ccccCCCccc-cccccc--------ccccc--e--eec------ccCCCCCc-c----cc
Q 043382 177 NITLG---------------LYTGNDRSIL-RTTAYF--------VVAGE--A--LKT------HITALGPL-V----LP 217 (329)
Q Consensus 177 ~~S~~---------------~~~Gd~~sal-l~~~~~--------~~~g~--a--L~~------di~~~Gp~-v----lP 217 (329)
.+|.. .+|||+++++ |++... .+.+. . ..+ ++...|.. . .|
T Consensus 193 ~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvVl~~~~~~~~~~~~~~i~~~~~~~~~~t~~~~~~~i~~~G~~~~l~~~vp 272 (393)
T PLN03172 193 ITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPDTKIERPLFEIVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVP 272 (393)
T ss_pred hhhhhhcccccccHHhhhccchhcCceEEEEEecCCCCcccCceeEEeeeccEEecCCcccccceEEcCCcEEEEechHH
Confidence 99831 3799999988 654210 01000 0 011 11111210 0 01
Q ss_pred -------------------cc-ccc-eeeEeechHHHHHHHHhcc--------CccccccccCCCCcCcHHHHHHHHH--
Q 043382 218 -------------------VS-EQL-LFIATSVGRKIFKMKIKQY--------PSRVTLYRFRNTSSSLVWYELAYAE-- 266 (329)
Q Consensus 218 -------------------~s-e~~-~~~~~~~grkv~~~~v~~~--------~sr~tl~~~GNtsSaSi~~~La~~~-- 266 (329)
.+ .+. .+.+|+.|+++++...+.+ .+|.+|++||||||+|+|++|++..
T Consensus 273 ~~~~~~i~~~~~~~L~~~gl~~~di~~~~~Hqgg~~Il~~v~~~Lgl~~~~~~~s~~vl~~yGNtSSaSv~~vL~~~~~~ 352 (393)
T PLN03172 273 GLISKNIEKSLVEAFAPIGINDWNSIFWIAHPGGPAILDQVEIKLDLKEEKLRATRHVLSDYGNMSSACVLFILDEMRKK 352 (393)
T ss_pred HHHHHHHHHHHHHHhhhcCCCccccceEEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHHhHHHHHHHHHHhh
Confidence 00 112 2457999999999888776 4557899999999999999999987
Q ss_pred --HhCCCCCC---CEEEEEeechhhhhhheeeeee
Q 043382 267 --AKRRIPKG---DRICQIGFGAGFNCNTVVWPVL 296 (329)
Q Consensus 267 --~kgrlk~G---DrV~~iafGsGf~~~sav~r~~ 296 (329)
++|++++| |+++++|||+||+++++++||.
T Consensus 353 ~~~~g~~~~G~~~~~~ll~afGpG~t~~~~ll~~~ 387 (393)
T PLN03172 353 SIEEGKGSTGEGLEWGVLFGFGPGLTVETVVLHSV 387 (393)
T ss_pred hhhcCCCCCCCCcceEEEEEeCCcceeeeeeeEec
Confidence 45788887 8999999999999999999994
No 10
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=100.00 E-value=1.3e-32 Score=267.94 Aligned_cols=234 Identities=32% Similarity=0.449 Sum_probs=179.8
Q ss_pred HHHHHHHHHHcCCCceEeccC--CCCCC------CCCchhHHHHHhhchHHHHHHHHHHHHhcCCCCCCcCEEEEeccCC
Q 043382 60 VTVLLKLLERSRIGNMTYGPK--SLMDN------PAENRHMKEAKKETDDVIIGAIDERLAKTGFKHKDIGILVVNSSLF 131 (329)
Q Consensus 60 ~~~~~~I~~~sGI~~R~~~~~--~~~~~------pe~~~~ma~~~~ea~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~ 131 (329)
.+.++||.+++||++||++.+ ...+. |......+.+.+++.+++.+|+++||+++|++|+|||+||++|+++
T Consensus 38 ~~~~~~i~~~~gI~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~a~~~~~~Id~li~~s~~~ 117 (361)
T cd00831 38 KEKLKRLCAKTGIETRYLVLPGGEETYAPRPEMSPSLDERNDIALEEARELAEEAARGALDEAGLRPSDIDHLVVNTSTG 117 (361)
T ss_pred HHHHHHHHhhcceeEEEEEecCchhhcCCccccCCCcCcchhhHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECCCC
Confidence 345689999999999999965 22110 1133456778888999999999999999999999999999999999
Q ss_pred CCCCchHHHHHHHcCCCCCcceecccch-------------HHHhcCCCCeEEEEeecCCCC-------------Ccccc
Q 043382 132 NPTPSLSAFIVNHYKLRSNILSYNLGAL-------------QSAQVQPNSYTLVVSTENITL-------------GLYTG 185 (329)
Q Consensus 132 ~~~Ps~aa~I~~~Lglr~~v~~~dl~g~-------------~lL~a~~~~~aLVVs~E~~S~-------------~~~~G 185 (329)
+..|+++++|+++||+++++.+||++++ +++++++.++||||++|.+|. .++||
T Consensus 118 ~~~P~~a~~i~~~lgl~~~~~~~dv~~~~C~~~~~al~~A~~~~~~~~~~~aLvv~~e~~s~~~~~~d~~~~~~~~~lfG 197 (361)
T cd00831 118 NPTPSLDAMLINRLGLRPDVKRYNLGGMGCSAGAIALDLAKDLLEANPGARVLVVSTELCSLWYRGPDHRSMLVGNALFG 197 (361)
T ss_pred CCCCCHHHHHHHHhCCCcccchhccccccchhHHHHHHHHHHHHHHCCCCEEEEEEeecccceeCCCCcHHHhhhhhhcc
Confidence 9999999999999999978999999853 788999999999999999873 14799
Q ss_pred CCCccc-ccccccc---------ccc----------ceeecccCC------CCCcc---------------cccc-----
Q 043382 186 NDRSIL-RTTAYFV---------VAG----------EALKTHITA------LGPLV---------------LPVS----- 219 (329)
Q Consensus 186 d~~sal-l~~~~~~---------~~g----------~aL~~di~~------~Gp~v---------------lP~s----- 219 (329)
|+++++ |++.... +.+ ..+..++.. .++.+ +-..
T Consensus 198 DgaaA~ll~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~~~L~~~~~g~~ 277 (361)
T cd00831 198 DGAAAVLLSNDPRDRRRERPLFELVRAASTLLPDSEDAMGWHLGEEGLTFVLSRDVPRLVEKNLERVLRKLLARLGIGLF 277 (361)
T ss_pred CCceEEEEEcCCCcccccccceeeecccceeeecCCCceEEEEEcceEEEEeChhHHHHHHHHHHHHHHHHhccccCCCc
Confidence 999988 6542110 000 000000000 00100 0001
Q ss_pred -ccc-eeeEeechHHHHHHHHhcc---Cc-----cccccccCCCCcCcHHHHHHHHHHhCCCCCCCEEEEEeechhhhhh
Q 043382 220 -EQL-LFIATSVGRKIFKMKIKQY---PS-----RVTLYRFRNTSSSLVWYELAYAEAKRRIPKGDRICQIGFGAGFNCN 289 (329)
Q Consensus 220 -e~~-~~~~~~~grkv~~~~v~~~---~s-----r~tl~~~GNtsSaSi~~~La~~~~kgrlk~GDrV~~iafGsGf~~~ 289 (329)
++. .+.+|+.++++++...+.+ ++ +.++++||||||+|+|+.|++++++|++++||+|++++||+||+|+
T Consensus 278 ~~did~~~~H~~~~~i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~ 357 (361)
T cd00831 278 KLAFDHWCVHPGGRAVLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVLAYMEAKGRVKRGDRGLLIAFGPGFTCE 357 (361)
T ss_pred cccceEEEECCCChHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHHHHHHHhCCCCCCCEEEEEEEcCCceee
Confidence 112 2567888999988877766 23 3689999999999999999999999999999999999999999999
Q ss_pred heee
Q 043382 290 TVVW 293 (329)
Q Consensus 290 sav~ 293 (329)
+++|
T Consensus 358 ~~l~ 361 (361)
T cd00831 358 SAVW 361 (361)
T ss_pred eeeC
Confidence 9987
No 11
>PLN03170 chalcone synthase; Provisional
Probab=100.00 E-value=2.1e-32 Score=270.87 Aligned_cols=257 Identities=16% Similarity=0.177 Sum_probs=187.8
Q ss_pred CCCChhHHHHHHHhhh---hhhhHHHHHHHHHHHcCCCceEeccC-CCC--C-------CCCCchhHHHHHhhchHHHHH
Q 043382 39 TLSTLDDLLQFWNELS---FKLNYVTVLLKLLERSRIGNMTYGPK-SLM--D-------NPAENRHMKEAKKETDDVIIG 105 (329)
Q Consensus 39 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~I~~~sGI~~R~~~~~-~~~--~-------~pe~~~~ma~~~~ea~~l~~~ 105 (329)
.+. ++++..+...+- .+.++.+++.+|.+++||++||.+-+ +.. + .|.....+..+.+++.+|+.+
T Consensus 34 ~~~-q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~a~~La~~ 112 (401)
T PLN03170 34 CVH-QADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYMHLTEEYLAENPNMCAYMAPSLDARQDIVVVEVPKLGKA 112 (401)
T ss_pred ccc-HHHHHHHHHHHccccCchhHHHHHHHHHHhCCCCceeEeccccchhhCccccccCCCCHHHHHHHHHHHHHHHHHH
Confidence 344 566554443321 12345666899999999999998742 111 1 111234567888899999999
Q ss_pred HHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCc-ceecccch------------HHHhcCCCCeEEE
Q 043382 106 AIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNI-LSYNLGAL------------QSAQVQPNSYTLV 172 (329)
Q Consensus 106 Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v-~~~dl~g~------------~lL~a~~~~~aLV 172 (329)
|+++||+++|++++|||+||++|+++..+|+++++|+++||+++++ +++|++.+ +++++++.++|||
T Consensus 113 Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~~gC~G~~~aL~~A~~l~~~~~~~~vLV 192 (401)
T PLN03170 113 AAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMMYQQGCFAGGTVLRVAKDLAENNRGARVLV 192 (401)
T ss_pred HHHHHHHHcCCCHHHCCEEEEEccCCCCCChHHHHHHHHhCcCcccHHHHhhcChhHHHHHHHHHHHHHHHcCCCCeEEE
Confidence 9999999999999999999999988767999999999999999776 47787766 8899999999999
Q ss_pred EeecCCCCC---------------ccccCCCccc-ccccccc-cc--cceeecc---------------cCCCCC-----
Q 043382 173 VSTENITLG---------------LYTGNDRSIL-RTTAYFV-VA--GEALKTH---------------ITALGP----- 213 (329)
Q Consensus 173 Vs~E~~S~~---------------~~~Gd~~sal-l~~~~~~-~~--g~aL~~d---------------i~~~Gp----- 213 (329)
|++|.+|.+ .+|||+++++ |++.... .. ...+.++ +...|.
T Consensus 193 V~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvVl~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~i~~~G~~~~l~ 272 (401)
T PLN03170 193 VCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPDERVERPLFQLVSASQTILPDSEGAIDGHLREVGLTFHLL 272 (401)
T ss_pred EEEehhhhccCCcccchhhhhhhhhhhhceeEEEEEecCCcccccCCceEEeeccceEecCCcccccceEEcCCeEEEEe
Confidence 999998832 2899999988 6652110 00 0011111 111110
Q ss_pred cccc-------------------c-cccc-eeeEeechHHHHHHHHhcc--------CccccccccCCCCcCcHHHHHHH
Q 043382 214 LVLP-------------------V-SEQL-LFIATSVGRKIFKMKIKQY--------PSRVTLYRFRNTSSSLVWYELAY 264 (329)
Q Consensus 214 ~vlP-------------------~-se~~-~~~~~~~grkv~~~~v~~~--------~sr~tl~~~GNtsSaSi~~~La~ 264 (329)
...| . .++. .+.+|+.|+++++...+.+ .+|.++++||||||+|+|+.|++
T Consensus 273 ~~vp~~~~~~i~~~v~~~L~~~gl~~~di~~~v~Hqgg~~il~~v~~~Lgl~~~~~~~s~~~l~~~GNtsSasv~~vL~~ 352 (401)
T PLN03170 273 KDVPGLISKNIERSLEEAFKPLGITDYNSIFWVAHPGGPAILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDE 352 (401)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCccccCeEEecCCcHHHHHHHHHHcCCChHHHHHHHHHHHHhCccHHhHHHHHHHH
Confidence 0001 0 0112 2456888999988877776 34468999999999999999999
Q ss_pred HH----HhCCCCCC---CEEEEEeechhhhhhheeeeee
Q 043382 265 AE----AKRRIPKG---DRICQIGFGAGFNCNTVVWPVL 296 (329)
Q Consensus 265 ~~----~kgrlk~G---DrV~~iafGsGf~~~sav~r~~ 296 (329)
+. ++|++++| |+++++|||+||+++++++||.
T Consensus 353 ~~~~~~~~g~~~~G~~~~~~ll~afGpG~t~~~~ll~~~ 391 (401)
T PLN03170 353 MRKRSAEDGQATTGEGFDWGVLFGFGPGLTVETVVLHSV 391 (401)
T ss_pred HHHhHhhcCCCCCCCCccEEEEEEeCchHhHHhHHheec
Confidence 97 46888888 8999999999999999999993
No 12
>PLN03169 chalcone synthase family protein; Provisional
Probab=100.00 E-value=1.6e-32 Score=271.05 Aligned_cols=238 Identities=18% Similarity=0.208 Sum_probs=177.4
Q ss_pred HHHHHHHHHHHcCCCceEeccCC-C------CC---CCCCchhHHHHHhhchHHHHHHHHHHHHhcCCCCCCcCEEEEec
Q 043382 59 YVTVLLKLLERSRIGNMTYGPKS-L------MD---NPAENRHMKEAKKETDDVIIGAIDERLAKTGFKHKDIGILVVNS 128 (329)
Q Consensus 59 ~~~~~~~I~~~sGI~~R~~~~~~-~------~~---~pe~~~~ma~~~~ea~~l~~~Aa~~aL~kagv~p~dId~LVv~s 128 (329)
+.+.+++|.+++||++||++.+. . .. .|.....+..+.+.+.+|+.+|+++||+++|++|+|||+||++|
T Consensus 56 ~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~lI~~t 135 (391)
T PLN03169 56 LKEKLERLCKTTTVKTRYVVMSKEILDKYPELATEGTPTIKQRLDIANEAVTQMAVEASLACIKEWGRPVSDITHLVYVS 135 (391)
T ss_pred HHHHHHHHHHhCCcceeeEeccccchhhCccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEEC
Confidence 45567889999999999998421 0 00 11112223345677899999999999999999999999999999
Q ss_pred cCCCCCCchHHHHHHHcCCCCCcc-eecccch------------HHHhcCCCCeEEEEeecCCCCC--------------
Q 043382 129 SLFNPTPSLSAFIVNHYKLRSNIL-SYNLGAL------------QSAQVQPNSYTLVVSTENITLG-------------- 181 (329)
Q Consensus 129 s~~~~~Ps~aa~I~~~Lglr~~v~-~~dl~g~------------~lL~a~~~~~aLVVs~E~~S~~-------------- 181 (329)
++++..|+++++|+++||+++++. ++|++.+ +++++++.++||||++|.+|..
T Consensus 136 ~t~~~~P~~a~~l~~~LGl~~~~~~~~d~~~gC~g~~~aL~~A~~~~~~~~~~~vLvv~~e~~s~~~~~~~~~~~~d~~~ 215 (391)
T PLN03169 136 SSEARLPGGDLYLAKQLGLSPDVQRVMLYFLGCSGGVAGLRVAKDIAENNPGSRVLLTTSETTILGFRPPSPDRPYDLVG 215 (391)
T ss_pred cCCCCCCcHHHHHHHHhCcCCcceeeecccChhHHHHHHHHHHHHHHHhCCCCeEEEEEEEcChhhccCCCccchhhhhh
Confidence 999999999999999999997774 7888776 8899999999999999997631
Q ss_pred -ccccCCCccc-ccccccc---cccceeecc----cC-----------C------CCCcc-------c-----------c
Q 043382 182 -LYTGNDRSIL-RTTAYFV---VAGEALKTH----IT-----------A------LGPLV-------L-----------P 217 (329)
Q Consensus 182 -~~~Gd~~sal-l~~~~~~---~~g~aL~~d----i~-----------~------~Gp~v-------l-----------P 217 (329)
.+|||+++++ |++.... .....+..+ ++ . .|+.+ + .
T Consensus 216 ~~lFGDGAaA~vl~~~~~~~~~~~~~~l~~~~~~~ip~~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~~L~~~g 295 (391)
T PLN03169 216 AALFGDGAAAVIIGADPIPVSESPFFELHTAIQQFLPGTEKTIDGRLTEEGINFKLGRELPQKIEDNIEGFCKKLMKKAG 295 (391)
T ss_pred hhhccCceEEEEEecCCCcccCCcceEEEeeeeeEcCCCccccCceecCCceEEEECcHHHHHHHHHHHHHHHHHHHHcC
Confidence 2799999988 6542100 000001000 00 0 01100 0 0
Q ss_pred cc-ccc---eeeEeechHHHHHHHHhcc---C-----ccccccccCCCCcCcHHHHHHHHHHhCCCC---CCCEEEEEee
Q 043382 218 VS-EQL---LFIATSVGRKIFKMKIKQY---P-----SRVTLYRFRNTSSSLVWYELAYAEAKRRIP---KGDRICQIGF 282 (329)
Q Consensus 218 ~s-e~~---~~~~~~~grkv~~~~v~~~---~-----sr~tl~~~GNtsSaSi~~~La~~~~kgrlk---~GDrV~~iaf 282 (329)
.+ ++. .+.+|+.++++++...+.+ + ++.++++||||||+|+|+.|++++++|+++ +||+++++||
T Consensus 296 l~~~did~~~~v~Hq~n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSasip~~L~~~~~~~~~~~~~~gd~~ll~af 375 (391)
T PLN03169 296 LVEKDYNDLFWAVHPGGPAILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEYMREELKKKGEEDEEWGLILAF 375 (391)
T ss_pred CCCCCCCcceEEecCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchHhHHHHHHHHHHHhhcccCCCCCcEEEEEEE
Confidence 11 111 3467888999888887776 2 335799999999999999999999888876 6999999999
Q ss_pred chhhhhhheeeeee
Q 043382 283 GAGFNCNTVVWPVL 296 (329)
Q Consensus 283 GsGf~~~sav~r~~ 296 (329)
|+||+|+++++||.
T Consensus 376 G~G~s~~~~ll~~~ 389 (391)
T PLN03169 376 GPGITFEGILARNL 389 (391)
T ss_pred cccHhHHHHHHhhh
Confidence 99999999999984
No 13
>PLN03171 chalcone synthase-like protein; Provisional
Probab=100.00 E-value=2.8e-32 Score=269.87 Aligned_cols=240 Identities=17% Similarity=0.186 Sum_probs=179.5
Q ss_pred HHHHHHHHHHHcCCCceEeccCCC-------C---CCCCCchhHHHHHhhchHHHHHHHHHHHHhcCCCCCCcCEEEEec
Q 043382 59 YVTVLLKLLERSRIGNMTYGPKSL-------M---DNPAENRHMKEAKKETDDVIIGAIDERLAKTGFKHKDIGILVVNS 128 (329)
Q Consensus 59 ~~~~~~~I~~~sGI~~R~~~~~~~-------~---~~pe~~~~ma~~~~ea~~l~~~Aa~~aL~kagv~p~dId~LVv~s 128 (329)
+...++||.+++||++||++.++. . ..|.....+..+.+.+.+|+.+|+++||+++|++|+|||+||++|
T Consensus 58 ~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~a~~la~~Aa~~aL~~ag~~~~dId~li~~t 137 (399)
T PLN03171 58 LKDKFKRICQELGVQKRYLHHTEELLSAHPEFLDHDAPSLDARLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTT 137 (399)
T ss_pred HHHHHHHHHHhcCCCceeEeccccccccCccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEc
Confidence 344578999999999999986531 0 011133456677788999999999999999999999999999999
Q ss_pred cCCCCCCchHHHHHHHcCCCCCcc-eecccch------------HHHhcCCCCeEEEEeecCCCC-------C-------
Q 043382 129 SLFNPTPSLSAFIVNHYKLRSNIL-SYNLGAL------------QSAQVQPNSYTLVVSTENITL-------G------- 181 (329)
Q Consensus 129 s~~~~~Ps~aa~I~~~Lglr~~v~-~~dl~g~------------~lL~a~~~~~aLVVs~E~~S~-------~------- 181 (329)
+++...|+++++|+++||++.++. .+++..+ +++++++.++||||++|.+|. +
T Consensus 138 ~t~~~~P~~a~~v~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~li~~~~~~~vLVv~~e~~s~~~~~~d~~~~~~~v~ 217 (399)
T PLN03171 138 NSGAHIPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGAAALRLAKDLAENNRGARVLVVAAEITLLLFNGPDEGCFQTLLN 217 (399)
T ss_pred CCCCCCCchHHHHHHHhCCCcccceeeccCCccHHHHHHHHHHHHHHHhCCCCeEEEEEEeccccccCCCCcccHHhhhc
Confidence 996569999999999999997653 4444333 889999999999999999872 1
Q ss_pred -ccccCCCccc-cccccc----c---ccc----------ceeecccCCCCC------cccc-------------------
Q 043382 182 -LYTGNDRSIL-RTTAYF----V---VAG----------EALKTHITALGP------LVLP------------------- 217 (329)
Q Consensus 182 -~~~Gd~~sal-l~~~~~----~---~~g----------~aL~~di~~~Gp------~vlP------------------- 217 (329)
.+|||+++++ |++... + +.. +.+..+++..|. ...|
T Consensus 218 ~~LFGDGAaA~vl~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~vp~~i~~~l~~~l~~~l~~~~ 297 (399)
T PLN03171 218 QGLFGDGAAAVIVGADADAAERPLFEIVSAAQAIIPESDDAINMHFTEGGLDGNIGTRQVPGLIGDNIERCLLDAFAPLL 297 (399)
T ss_pred cccccCccEEEEEecCCCCCCCCceEEEEeeeEEecCCchheEEEEEcCCceEEECchhHHHHHHHHHHHHHHHHHHhhc
Confidence 2899999988 654210 0 100 111110011110 0011
Q ss_pred -----c-cccceeeEeechHHHHHHHHhcc---C-----ccccccccCCCCcCcHHHHHHHHHHhCC--CCCC---CEEE
Q 043382 218 -----V-SEQLLFIATSVGRKIFKMKIKQY---P-----SRVTLYRFRNTSSSLVWYELAYAEAKRR--IPKG---DRIC 278 (329)
Q Consensus 218 -----~-se~~~~~~~~~grkv~~~~v~~~---~-----sr~tl~~~GNtsSaSi~~~La~~~~kgr--lk~G---DrV~ 278 (329)
. .++..+++|+.++++++...+.+ + +|.++++||||||+|+|+.|+++.++++ +++| |+++
T Consensus 298 ~~~~g~~~~di~~~~Hq~~~~il~~v~~~Lgl~~ek~~~s~~~l~~yGNtssaSip~~L~~~~~~~~~~~~~G~~~d~vl 377 (399)
T PLN03171 298 GGDGGAEWNDLFWAVHPGSSAILDQVDAALGLEPEKLAASRRVLSDYGNMFGATVIFALDELRRQMEEAAAAGAWPELGV 377 (399)
T ss_pred ccccCCCcccceEEEcCCcHHHHHHHHHHcCCCHHHhHHHHHHHHHhCcchhhhHHHHHHHHHhhHhhcCCCCCCcceEE
Confidence 0 12234678999999999888876 3 3357999999999999999999998874 6888 9999
Q ss_pred EEeechhhhhhheeeeeecc
Q 043382 279 QIGFGAGFNCNTVVWPVLKT 298 (329)
Q Consensus 279 ~iafGsGf~~~sav~r~~~~ 298 (329)
++|||+||+|++++|+|.+.
T Consensus 378 l~~fG~Glt~~~~ll~~~~~ 397 (399)
T PLN03171 378 MMAFGPGLTVDAMLLHASGH 397 (399)
T ss_pred EEEEcccHHHHHHHhhcccC
Confidence 99999999999999998653
No 14
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=2.4e-32 Score=266.42 Aligned_cols=218 Identities=15% Similarity=0.141 Sum_probs=167.7
Q ss_pred HHHHHHHcCCCceEeccCCCCCCCCCchhHHHHHhhchHHHHHHHHHHHHhcCCCCCCcCEEEEeccC-CCCCCchHHHH
Q 043382 63 LLKLLERSRIGNMTYGPKSLMDNPAENRHMKEAKKETDDVIIGAIDERLAKTGFKHKDIGILVVNSSL-FNPTPSLSAFI 141 (329)
Q Consensus 63 ~~~I~~~sGI~~R~~~~~~~~~~pe~~~~ma~~~~ea~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~-~~~~Ps~aa~I 141 (329)
.+++.+++||++||++.++ |...+|+ .+|+++||+++|++|+|||+||++|++ ++..|+++++|
T Consensus 39 ~~~i~~~~Gi~~R~~~~~~-----e~~~~la----------~~Aa~~aL~~a~~~~~dId~lI~~t~t~d~~~P~~a~~v 103 (353)
T PRK12880 39 LKRMKKVIGLNTRYICDEN-----TCVSDLG----------KHAANTLLQGLNIDKNSLDALIVVTQSPDFFMPSTACYL 103 (353)
T ss_pred hhhhhhccCceEEEeCCCC-----CCHHHHH----------HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHH
Confidence 4778899999999999876 5777888 999999999999999999999999988 89999999999
Q ss_pred HHHcCCCCCcceecccch------------HHHhcCCCCeEEEEeecCCCC--C-------ccccCCCccc-cccccccc
Q 043382 142 VNHYKLRSNILSYNLGAL------------QSAQVQPNSYTLVVSTENITL--G-------LYTGNDRSIL-RTTAYFVV 199 (329)
Q Consensus 142 ~~~Lglr~~v~~~dl~g~------------~lL~a~~~~~aLVVs~E~~S~--~-------~~~Gd~~sal-l~~~~~~~ 199 (329)
+++||+++++.+||++++ +++++++.+ +|||++|.+|. + .+|||+++++ |++.-.+.
T Consensus 104 ~~~Lg~~~~~~~~di~~~C~g~~~aL~~A~~~i~~~~~~-~LVv~~e~~S~~~~~~d~~~~~lFGDGAaA~vl~~~~~~~ 182 (353)
T PRK12880 104 HQLLNLSSKTIAFDLGQACAGYLYGLFVAHSLIQSGLGK-ILLICGDTLSKFIHPKNMNLAPIFGDGVSATLIEKTDFNE 182 (353)
T ss_pred HHHhCCCCCceEEehhhhhHHHHHHHHHHHHHHHcCCCC-EEEEEehhhhccCCcccCCceeeecccceEEEEEecCCCC
Confidence 999999988999999876 888998888 99999999883 2 3899999987 66421111
Q ss_pred ccceeecc--------cCCCCCcccccc-------------ccceeeEeechHHHHHHHHhcc-----------------
Q 043382 200 AGEALKTH--------ITALGPLVLPVS-------------EQLLFIATSVGRKIFKMKIKQY----------------- 241 (329)
Q Consensus 200 ~g~aL~~d--------i~~~Gp~vlP~s-------------e~~~~~~~~~grkv~~~~v~~~----------------- 241 (329)
....+.+| ++..|. ..|.. .+....++++|+++|+++++.+
T Consensus 183 ~~~~~~~~~~~~~~~~~p~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~~~d 261 (353)
T PRK12880 183 AFFELGSDGKYFDKLIIPKGAM-RIPKADIFNDDSLMQTEEFRQLENLYMDGANIFNMALECEPKSFKEILEFSKVDEKD 261 (353)
T ss_pred ceEEEEecCCCCCeEEecCCCc-CCCccccccccccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 11122222 222221 11110 0112345677777776544322
Q ss_pred ------------------------Ccc---ccccccCCCCcCcHHHHHHHHHHhCCCCCCCEEEEEeechhhhhhheeee
Q 043382 242 ------------------------PSR---VTLYRFRNTSSSLVWYELAYAEAKRRIPKGDRICQIGFGAGFNCNTVVWP 294 (329)
Q Consensus 242 ------------------------~sr---~tl~~~GNtsSaSi~~~La~~~~kgrlk~GDrV~~iafGsGf~~~sav~r 294 (329)
++| .++++||||||+|+|+.|++..++|+++ +++++||+|++|+++++|
T Consensus 262 id~~v~HQ~~~~i~~~i~~~Lgl~~ek~~~~~l~~~GNtssasip~~L~~~~~~~~~~----~ll~~~G~G~s~g~~ll~ 337 (353)
T PRK12880 262 IAFHLFHQSNAYLVDCIKEELKLNDDKVPNFIMEKYANLSACSLPALLCELDTPKEFK----ASLSAFGAGLSWGSAVLN 337 (353)
T ss_pred CCEEEECCCCHHHHHHHHHHhCCCHHHhhhhhHHhhCCHHHHHHHHHHHHHHHcCCcE----EEEEEEchhhhheEeEEE
Confidence 344 2479999999999999999999888764 999999999999999999
Q ss_pred eeccCCC
Q 043382 295 VLKTINL 301 (329)
Q Consensus 295 ~~~~~~~ 301 (329)
|.+...+
T Consensus 338 ~~~~~~~ 344 (353)
T PRK12880 338 FKDLYTK 344 (353)
T ss_pred ECCcCCC
Confidence 9655443
No 15
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=4.5e-32 Score=260.22 Aligned_cols=214 Identities=20% Similarity=0.262 Sum_probs=164.5
Q ss_pred HHHHHHcCCCceEeccCCCCCCCCCchhHHHHHhhchHHHHHHHHHHHHhcCCCCCCcCEEEEeccC-CCCCCchHHHHH
Q 043382 64 LKLLERSRIGNMTYGPKSLMDNPAENRHMKEAKKETDDVIIGAIDERLAKTGFKHKDIGILVVNSSL-FNPTPSLSAFIV 142 (329)
Q Consensus 64 ~~I~~~sGI~~R~~~~~~~~~~pe~~~~ma~~~~ea~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~-~~~~Ps~aa~I~ 142 (329)
+++.+++||++|++++++ |+..+|+ .+|+++||+++|++|+|||+||++|++ ++..|+.+++|+
T Consensus 32 ~~i~~~~Gi~~r~~~~~~-----e~~~~la----------~~Aa~~aL~~ag~~~~~Id~li~~t~~~d~~~p~~a~~v~ 96 (326)
T PRK05963 32 GWIERRTGIRCRRWAAPD-----ETLSDLA----------ASAGDMALSDAGIERSDIALTLLATSTPDHLLPPSAPLLA 96 (326)
T ss_pred HHhhhccCCeEEEEcCCC-----CCHHHHH----------HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCcHHHHHH
Confidence 678999999999999877 5878888 999999999999999999999999887 689999999999
Q ss_pred HHcCCCCCcceecccch------------HHHhcCCCCeEEEEeecCCCCC---------ccccCCCccc-ccccc---c
Q 043382 143 NHYKLRSNILSYNLGAL------------QSAQVQPNSYTLVVSTENITLG---------LYTGNDRSIL-RTTAY---F 197 (329)
Q Consensus 143 ~~Lglr~~v~~~dl~g~------------~lL~a~~~~~aLVVs~E~~S~~---------~~~Gd~~sal-l~~~~---~ 197 (329)
++||++ ++.+||++++ ++++++ .++||||++|.+|.. ++|||+++++ |+... .
T Consensus 97 ~~Lg~~-~~~~~di~~~C~g~~~aL~~A~~~l~~~-~~~aLVv~~d~~s~~~~~~~~~~~~lfGDgA~A~ll~~~~~~~~ 174 (326)
T PRK05963 97 HRLGLQ-NSGAIDLAGACAGFLYALVLADGFVRAQ-GKPVLVVAANILSRRINMAERASAVLFADAAGAVVLAPSAKANS 174 (326)
T ss_pred HHhCCC-CCceeeccchhhHHHHHHHHHHHHHHcC-CCeEEEEEechhhccCCccccCceEEEeecceEEEEEecCCCCC
Confidence 999998 6899999886 778776 489999999998731 3789999988 65422 1
Q ss_pred ccccceeecc--------cCCCCCccccccccc---eeeEe-echHHHHHHH----------------------------
Q 043382 198 VVAGEALKTH--------ITALGPLVLPVSEQL---LFIAT-SVGRKIFKMK---------------------------- 237 (329)
Q Consensus 198 ~~~g~aL~~d--------i~~~Gp~vlP~se~~---~~~~~-~~grkv~~~~---------------------------- 237 (329)
++.+..+.++ ++.+|. ..|.+.+. ..++. .+|+++|+..
T Consensus 175 ~~l~~~~~t~~~~~~~~~~~~gg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~did~~~~h 253 (326)
T PRK05963 175 GVLGSQLISDGSHYDLIKIPAGGS-ARPFAPERDASEFLMTMQDGRAVFTEAVRMMSGASQNVLASAAMTPQDIDRFFPH 253 (326)
T ss_pred ceEEEEEEEcCCCCCeEEeCCCCc-CCCCcccccccccceEecCCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEeC
Confidence 2222333332 122221 22322110 11122 2445444432
Q ss_pred ----------Hhcc---Ccc--ccccccCCCCcCcHHHHHHHHHHhCCCCCCCEEEEEeechhhhhhheeeee
Q 043382 238 ----------IKQY---PSR--VTLYRFRNTSSSLVWYELAYAEAKRRIPKGDRICQIGFGAGFNCNTVVWPV 295 (329)
Q Consensus 238 ----------v~~~---~sr--~tl~~~GNtsSaSi~~~La~~~~kgrlk~GDrV~~iafGsGf~~~sav~r~ 295 (329)
.+.+ ++| .++++||||+|+|+|+.|++++++|++++||+|++++||+||+++++++||
T Consensus 254 ~~~~~~~~~~~~~l~l~~~k~~~~l~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~vll~~~G~G~~~~~~ll~~ 326 (326)
T PRK05963 254 QANARIVDKVCETIGIPRAKAASTLETYGNSSAATIPLSLSLANLEQPLREGERLLFAAAGAGMTGGAVVMRV 326 (326)
T ss_pred CCCHHHHHHHHHHcCCCHHHhhhhHHhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEehhhhheeeEEeC
Confidence 2222 344 678999999999999999999999999999999999999999999999987
No 16
>PLN03173 chalcone synthase; Provisional
Probab=99.97 E-value=2.1e-31 Score=263.00 Aligned_cols=240 Identities=19% Similarity=0.196 Sum_probs=177.1
Q ss_pred hHHHHHHHHHHHcCCCceEeccC-CC---C---C---CCCCchhHHHHHhhchHHHHHHHHHHHHhcCCCCCCcCEEEEe
Q 043382 58 NYVTVLLKLLERSRIGNMTYGPK-SL---M---D---NPAENRHMKEAKKETDDVIIGAIDERLAKTGFKHKDIGILVVN 127 (329)
Q Consensus 58 ~~~~~~~~I~~~sGI~~R~~~~~-~~---~---~---~pe~~~~ma~~~~ea~~l~~~Aa~~aL~kagv~p~dId~LVv~ 127 (329)
.+.+.+.+|.+++||++||.+-+ +. + . .|.....+..+.+++.+|+.+|+++||+++|++|+|||+||++
T Consensus 51 ~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~li~~ 130 (391)
T PLN03173 51 ELKEKFKRMCEKSMIKKRYMHLTEEILKENPSVCEYMAPSLDARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFC 130 (391)
T ss_pred hHHHHHHHHHHhCCCCeeeEeccchhhhhCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 45566889999999999998642 21 1 0 0213445678888999999999999999999999999999999
Q ss_pred ccCCCCCCchHHHHHHHcCCCCCccee-cccch------------HHHhcCCCCeEEEEeecCCCCC-------------
Q 043382 128 SSLFNPTPSLSAFIVNHYKLRSNILSY-NLGAL------------QSAQVQPNSYTLVVSTENITLG------------- 181 (329)
Q Consensus 128 ss~~~~~Ps~aa~I~~~Lglr~~v~~~-dl~g~------------~lL~a~~~~~aLVVs~E~~S~~------------- 181 (329)
|++....|+++++|+++||+++++.++ +++.+ +++++++.++||||++|.+|..
T Consensus 131 t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v 210 (391)
T PLN03173 131 TTSGVDMPGADYQLTKLLGLRSSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLV 210 (391)
T ss_pred ccCCCcccHHHHHHHHHhCCCccceeeehhcCccHHHHHHHHHHHHHHHhCCCCeEEEEEEehhhhhhCCccccchhhhh
Confidence 988766999999999999999877654 44443 8899999999999999998831
Q ss_pred --ccccCCCccc-cccccc-ccc-------c----------ceeecccCCCCCc-c----cc------------------
Q 043382 182 --LYTGNDRSIL-RTTAYF-VVA-------G----------EALKTHITALGPL-V----LP------------------ 217 (329)
Q Consensus 182 --~~~Gd~~sal-l~~~~~-~~~-------g----------~aL~~di~~~Gp~-v----lP------------------ 217 (329)
.+|||+++++ |++... +.. + ..+..++...|.. . .|
T Consensus 211 ~~~LFGDGAaAvvl~~~~~~~~~~~~~~l~~~~~~~~~~t~~~~~~~i~~~G~~~~l~~~vp~~~~~~~~~~i~~~L~~~ 290 (391)
T PLN03173 211 GQALFGDGAAAIIIGSDPVLGVEKPLFELVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNVEKSLTEAFKPL 290 (391)
T ss_pred hhhhhcCceEEEEEeCCCCCCcCCcceEEEeeeeEEecCCccceeeEEEcCceEEEEecHHHHHHHHHHHHHHHHHHHhc
Confidence 3799999988 654210 000 0 0011111111100 0 01
Q ss_pred -c-cccc-eeeEeechHHHHHHHHhcc--------CccccccccCCCCcCcHHHHHHHHHHh----CCCCCC---CEEEE
Q 043382 218 -V-SEQL-LFIATSVGRKIFKMKIKQY--------PSRVTLYRFRNTSSSLVWYELAYAEAK----RRIPKG---DRICQ 279 (329)
Q Consensus 218 -~-se~~-~~~~~~~grkv~~~~v~~~--------~sr~tl~~~GNtsSaSi~~~La~~~~k----grlk~G---DrV~~ 279 (329)
. .++. .+.+|+.|+++++...+.+ .+|.++++||||||+|+|++|++.+++ |++++| +++++
T Consensus 291 gl~~~di~~~v~Hqgg~~Il~~v~~~LgL~~ekl~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~~~~~~g~~~~~~l~ 370 (391)
T PLN03173 291 GISDWNSLFWIAHPGGPAILDQVEAKLALKPEKLRATRHVLSEYGNMSSACVLFILDEMRKKSAEDGLKSTGEGLEWGVL 370 (391)
T ss_pred CCCccccCeEEECCCcHHHHHHHHHHcCCChHHHHHHHHHHHHhCcchhhHHHHHHHHHHHhhhhcCCCCCCCCcceEEE
Confidence 0 0112 3568999999999887776 344689999999999999999999964 444443 88999
Q ss_pred Eeechhhhhhheeeeeec
Q 043382 280 IGFGAGFNCNTVVWPVLK 297 (329)
Q Consensus 280 iafGsGf~~~sav~r~~~ 297 (329)
+|||+||++++++++|..
T Consensus 371 ~afGpG~t~e~~ll~~~~ 388 (391)
T PLN03173 371 FGFGPGLTVETVVLHSVA 388 (391)
T ss_pred EEeCchHHHHHHHHhhcc
Confidence 999999999999999843
No 17
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.97 E-value=2.9e-31 Score=248.21 Aligned_cols=229 Identities=21% Similarity=0.204 Sum_probs=181.0
Q ss_pred HHcCCCceEeccCCCCCC-C-CCchhHHHHHhhchHHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHc
Q 043382 68 ERSRIGNMTYGPKSLMDN-P-AENRHMKEAKKETDDVIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHY 145 (329)
Q Consensus 68 ~~sGI~~R~~~~~~~~~~-p-e~~~~ma~~~~ea~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~L 145 (329)
.+.+|++|+.+.|...|. | .....+.-+.|||.+++++|+++||++.++.|+|||.||++|||...+||+.+.|+++|
T Consensus 43 ~~~~i~~R~~v~Pl~~y~e~~~f~ekN~ifie~a~~l~v~a~r~aL~~~~l~pedId~vv~vtsTG~~~Ps~dari~~~L 122 (356)
T COG3424 43 ANAQINRRHLVLPLDWYREPHGFGEKNEIFIEEAVPLGVDALRRALDGSPLRPEDIDAVVTVTSTGLATPSLDARIVGEL 122 (356)
T ss_pred hccccccceecccHhhccCCCChhhhhhhHHHHHHHHHHHHHHHHhccCCCCHHHCcEEEEEeeccccCCChhHHHHhhc
Confidence 478888888886544332 1 12234557788999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcceecccch-------------HHHhcCCCCeEEEEeecCCCCCc--------------cccCCCccc-ccccc-
Q 043382 146 KLRSNILSYNLGAL-------------QSAQVQPNSYTLVVSTENITLGL--------------YTGNDRSIL-RTTAY- 196 (329)
Q Consensus 146 glr~~v~~~dl~g~-------------~lL~a~~~~~aLVVs~E~~S~~~--------------~~Gd~~sal-l~~~~- 196 (329)
|++++++++.+.|+ +|++++|..+|||||.|.||.++ +|||+++++ ++...
T Consensus 123 gl~p~~~Rvpv~glGCaaga~glara~~y~ra~P~~~vlvV~vELCSLt~~~~d~t~s~lVgtaLF~DG~AA~vv~gd~~ 202 (356)
T COG3424 123 GLSPDTRRVPVWGLGCAAGAAGLARARDYCRAAPDANVLVVCVELCSLTYVFADDTKSNLVGTALFGDGAAAVVVSGDRR 202 (356)
T ss_pred CCCCccceeeeecchhhhhhhHHHHHHHHHhhCccceEEEEEeeeeeeeeecCCCCcccceeeeeecCCeeEEEEecccc
Confidence 99999999999988 89999999999999999999654 789998887 43211
Q ss_pred -------------------------cc----cccce--eecccCCC-----CCccc------ccc-ccc-eeeEeechHH
Q 043382 197 -------------------------FV----VAGEA--LKTHITAL-----GPLVL------PVS-EQL-LFIATSVGRK 232 (329)
Q Consensus 197 -------------------------~~----~~g~a--L~~di~~~-----Gp~vl------P~s-e~~-~~~~~~~grk 232 (329)
|+ ..|.. |..|++++ .|-|- +++ +++ .|..|..|+|
T Consensus 203 ~~~~~~~~p~i~~s~StL~~dse~~Mgwdv~d~G~~~vlSrdlp~lIe~~l~~~V~~fL~~~~ls~~dI~~w~~HPGG~K 282 (356)
T COG3424 203 AEGKRPLRPDILDSFSTLYPDSEDIMGWDVGDQGLKVVLSRDLPNLIESYLAPNVTTFLATHGLSIEDIEAWVVHPGGPK 282 (356)
T ss_pred ccccCCCCceecccccccCCccccccceeecCCcEEEEEcCchhHHHHHHhhhhHHHHHHHcCCchhhhceeeeCCCCch
Confidence 00 00100 11122211 11110 111 122 3678999999
Q ss_pred HHHHHHhcc--------CccccccccCCCCcCcHHHHHHHHHHhCCCCCCCEEEEEeechhhhhhheeeeeec
Q 043382 233 IFKMKIKQY--------PSRVTLYRFRNTSSSLVWYELAYAEAKRRIPKGDRICQIGFGAGFNCNTVVWPVLK 297 (329)
Q Consensus 233 v~~~~v~~~--------~sr~tl~~~GNtsSaSi~~~La~~~~kgrlk~GDrV~~iafGsGf~~~sav~r~~~ 297 (329)
|++...+.+ .+|..|.+|||+||+|+.|.|.+.++++ .|+|.+.+++|||+||+...++++|.+
T Consensus 283 Vida~~~sLgls~e~l~~s~~~L~~~GNMSSatvLfVL~d~l~~~-~~~g~~Gl~~A~GPGf~sElvL~~w~~ 354 (356)
T COG3424 283 VIDAYEESLGLSPEALELSWDVLREYGNMSSATVLFVLEDTLQKA-PKSGSRGLMFAMGPGFCSELVLLDWEG 354 (356)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHhCCccchhhHHHHHHHHHhc-CCCCcceeeeecCCcceeeeeeEEeec
Confidence 999988877 4668999999999999999999999997 699999999999999999999999964
No 18
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.97 E-value=1.7e-30 Score=249.66 Aligned_cols=215 Identities=17% Similarity=0.247 Sum_probs=166.2
Q ss_pred HHHHHHcCCCceEeccCCCCCCCCCchhHHHHHhhchHHHHHHHHHHHHhcCCCCCCcCEEEEeccC-CCCCCchHHHHH
Q 043382 64 LKLLERSRIGNMTYGPKSLMDNPAENRHMKEAKKETDDVIIGAIDERLAKTGFKHKDIGILVVNSSL-FNPTPSLSAFIV 142 (329)
Q Consensus 64 ~~I~~~sGI~~R~~~~~~~~~~pe~~~~ma~~~~ea~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~-~~~~Ps~aa~I~ 142 (329)
+|+.+++||++|++++ + ++..+|+ .+|+++||+++|++|+|||+||++|++ ++..|+++.+|+
T Consensus 33 ~~i~~~~Gi~~R~~~~-~-----~~~~~la----------~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~p~~a~~v~ 96 (329)
T PRK07204 33 GWVLKKSGVKTRHFVD-G-----ETSSYMG----------AEAAKKAVEDAKLTLDDIDCIICASGTIQQAIPCTASLIQ 96 (329)
T ss_pred hHhhhccCceEEeecC-C-----CCHHHHH----------HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCccHHHHHH
Confidence 6788999999999998 4 4667777 999999999999999999999999877 567899999999
Q ss_pred HHcCCCC-Ccceecccch------------HHHhcCCCCeEEEEeecCCCC--C-------ccccCCCccc-ccccc--c
Q 043382 143 NHYKLRS-NILSYNLGAL------------QSAQVQPNSYTLVVSTENITL--G-------LYTGNDRSIL-RTTAY--F 197 (329)
Q Consensus 143 ~~Lglr~-~v~~~dl~g~------------~lL~a~~~~~aLVVs~E~~S~--~-------~~~Gd~~sal-l~~~~--~ 197 (329)
++||+++ ++.++|++++ +++++++.++||||++|.+|. + ++|||+++++ |+... .
T Consensus 97 ~~lgl~~~~~~~~~v~~~C~~~~~al~~a~~~l~~g~~~~~Lvv~~e~~s~~~~~~~~~~~~lfGDGAaA~ll~~~~~~~ 176 (329)
T PRK07204 97 EQLGLQHSGIPCFDINSTCLSFITALDTISYAIECGRYKRVLIISSEISSVGLNWGQNESCILFGDGAAAVVITKGDHSS 176 (329)
T ss_pred HHhCCCCCCceEEEccchhHHHHHHHHHHHHHHHCCCCCEEEEEEeccccCCCCcccCcceEEEecccEEEEEEEcCCCC
Confidence 9999985 4789999865 788888899999999999873 1 3699999988 66422 1
Q ss_pred ccccceeecc--------cCCCCCccccccc-----cceeeEeechHHHHHHHHhc------------------------
Q 043382 198 VVAGEALKTH--------ITALGPLVLPVSE-----QLLFIATSVGRKIFKMKIKQ------------------------ 240 (329)
Q Consensus 198 ~~~g~aL~~d--------i~~~Gp~vlP~se-----~~~~~~~~~grkv~~~~v~~------------------------ 240 (329)
++.+..+.++ ++..|. ..|..+ ...+.++++|+++++.+.+.
T Consensus 177 ~il~~~~~t~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~ 255 (329)
T PRK07204 177 RILASHMETYSSGAHLSEIRGGGT-MIHPREYSEERKEDFLFDMNGRAIFKLSSKYLMKFIDKLLMDAGYTLADIDLIVP 255 (329)
T ss_pred cEEEEEEEEecCCCCceEEecCCc-CCCCcccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEe
Confidence 1222222222 122222 112111 11345667777776532211
Q ss_pred --------------c---Ccc--ccccccCCCCcCcHHHHHHHHHHhCCCCCCCEEEEEeechhhhhhheeeee
Q 043382 241 --------------Y---PSR--VTLYRFRNTSSSLVWYELAYAEAKRRIPKGDRICQIGFGAGFNCNTVVWPV 295 (329)
Q Consensus 241 --------------~---~sr--~tl~~~GNtsSaSi~~~La~~~~kgrlk~GDrV~~iafGsGf~~~sav~r~ 295 (329)
+ ++| .++++||||+|+|+|+.|++++++|++++||+|++++||+||+|+++++||
T Consensus 256 H~~~~~~~~~i~~~l~l~~e~~~~~~~~~Gn~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~ll~~ 329 (329)
T PRK07204 256 HQASGPAMRLIRKKLGVDEERFVTIFEDHGNMIAASIPVALFEAIKQKKVQRGNKILLLGTSAGLSIGGILLEY 329 (329)
T ss_pred CCCCHHHHHHHHHHcCCCHHHhhhhHhhhCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhheeeEEeC
Confidence 1 334 678999999999999999999999999999999999999999999999985
No 19
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=99.97 E-value=1e-30 Score=256.99 Aligned_cols=216 Identities=18% Similarity=0.236 Sum_probs=164.5
Q ss_pred HHHHHHcCCCceEeccCCCCCCCCCchhHHHHHhhchHHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHH
Q 043382 64 LKLLERSRIGNMTYGPKSLMDNPAENRHMKEAKKETDDVIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVN 143 (329)
Q Consensus 64 ~~I~~~sGI~~R~~~~~~~~~~pe~~~~ma~~~~ea~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~ 143 (329)
++|.+++||++|+++.++ |+..+|+ .+|+++||+++|++|+|||.||++|++....|+.+..|++
T Consensus 76 ~~i~~~tGi~~R~~~~~~-----~~~~~La----------~~Aa~~aL~~agi~~~dId~li~~s~~~~~~~~~a~~v~~ 140 (379)
T PLN02326 76 EWIATRTGIRNRRVLSGD-----ETLTSLA----------VEAAKKALEMAGVDPEDVDLVLLCTSSPDDLFGSAPQVQA 140 (379)
T ss_pred hheecccCcceEeecCCC-----CCHHHHH----------HHHHHHHHHHcCCCHHHCCEEEEEeCCCCccCcHHHHHHH
Confidence 678999999999998776 5777787 9999999999999999999999998875445678999999
Q ss_pred HcCCCCCcceecccch------------HHHhcCCCCeEEEEeecCCCC--C-------ccccCCCccc-cccccc---c
Q 043382 144 HYKLRSNILSYNLGAL------------QSAQVQPNSYTLVVSTENITL--G-------LYTGNDRSIL-RTTAYF---V 198 (329)
Q Consensus 144 ~Lglr~~v~~~dl~g~------------~lL~a~~~~~aLVVs~E~~S~--~-------~~~Gd~~sal-l~~~~~---~ 198 (329)
+||++ ++.+||++++ +++++++.+++|||++|.+|. + .+|||+++++ |++... +
T Consensus 141 ~LG~~-~~~~~dv~~~Ca~~~~aL~~A~~~l~~g~~~~vLVv~~e~~s~~~~~~d~~~~~lfGDGAaAvlL~~~~~~~~~ 219 (379)
T PLN02326 141 ALGCT-NALAFDLTAACSGFVLGLVTAARFIRGGGYKNVLVIGADALSRYVDWTDRGTCILFGDGAGAVVLQACDDDEDG 219 (379)
T ss_pred HhCCC-CCceeeccccchHHHHHHHHHHHHHHcCCCCEEEEEEechhcCCCCccccCceEEEcceeEEEEEEEcCCCCCc
Confidence 99998 7999998876 788899999999999999874 2 2799999988 665321 1
Q ss_pred cccceeecc--------cCCCCC-----c-------cccccccceeeEeechHHHHHHHHh-------------------
Q 043382 199 VAGEALKTH--------ITALGP-----L-------VLPVSEQLLFIATSVGRKIFKMKIK------------------- 239 (329)
Q Consensus 199 ~~g~aL~~d--------i~~~Gp-----~-------vlP~se~~~~~~~~~grkv~~~~v~------------------- 239 (329)
+.+..+.+| ++..|. . ..+..+.....+.+.|+++|+++++
T Consensus 220 i~~~~~~t~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~~~d 299 (379)
T PLN02326 220 LLGFDMHSDGNGHKHLHATFKGEDDDSSGGNTNGVGDFPPKKASYSCIQMNGKEVFKFAVRCVPQVIESALQKAGLTAES 299 (379)
T ss_pred eEEEEEEEcCCCCCeEEecCCCCcccccccccccccccccccccccceEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 222223222 011110 0 0000000111255677776654322
Q ss_pred -------------------cc---Ccc--ccccccCCCCcCcHHHHHHHHHHhCCCCCCCEEEEEeechhhhhhheeeee
Q 043382 240 -------------------QY---PSR--VTLYRFRNTSSSLVWYELAYAEAKRRIPKGDRICQIGFGAGFNCNTVVWPV 295 (329)
Q Consensus 240 -------------------~~---~sr--~tl~~~GNtsSaSi~~~La~~~~kgrlk~GDrV~~iafGsGf~~~sav~r~ 295 (329)
.+ ++| .++++||||||+|+|+.|++++++|++++||+|++++||+||+|++++++|
T Consensus 300 Id~~v~Hq~n~~~~~~~~~~Lgl~~ek~~~~l~~~GNt~sAsi~~~L~~~~~~g~~~~Gd~vll~~~G~G~t~~~~ll~~ 379 (379)
T PLN02326 300 IDWLLLHQANQRIIDAVAQRLGIPPEKVISNLANYGNTSAASIPLALDEAVRSGKVKKGDVIATAGFGAGLTWGSAIVRW 379 (379)
T ss_pred CCEEEECCCCHHHHHHHHHHcCCCHHHeeecHhhcCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEChhheeeEEEEEC
Confidence 11 344 678999999999999999999999999999999999999999999999986
No 20
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.97 E-value=1.6e-30 Score=250.38 Aligned_cols=217 Identities=21% Similarity=0.273 Sum_probs=167.0
Q ss_pred HHHHHHcCCCceEeccCCCCCCCCCchhHHHHHhhchHHHHHHHHHHHHhcCCCCCCcCEEEEeccC-CCCCCchHHHHH
Q 043382 64 LKLLERSRIGNMTYGPKSLMDNPAENRHMKEAKKETDDVIIGAIDERLAKTGFKHKDIGILVVNSSL-FNPTPSLSAFIV 142 (329)
Q Consensus 64 ~~I~~~sGI~~R~~~~~~~~~~pe~~~~ma~~~~ea~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~-~~~~Ps~aa~I~ 142 (329)
+++.+++||++|++.+++ ++..+|+ .+|+++||+++|++++|||.||++|++ ++..|+++.+|+
T Consensus 41 ~~i~~~~Gi~~R~~~~~~-----~~~~~la----------~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~~p~~a~~v~ 105 (338)
T PRK09258 41 GQLEALTGIRERRWWPEG-----TQLSDGA----------IAAGRKALAEAGIDPSDIGLLINTSVCRDYLEPATACRVH 105 (338)
T ss_pred hHhhhhcCceeEecCCCC-----CCHHHHH----------HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHH
Confidence 567889999999998766 4666777 999999999999999999999999877 788999999999
Q ss_pred HHcCCCCCcceecccch------------HHHhcCCCCeEEEEeecCCCC------------------------CccccC
Q 043382 143 NHYKLRSNILSYNLGAL------------QSAQVQPNSYTLVVSTENITL------------------------GLYTGN 186 (329)
Q Consensus 143 ~~Lglr~~v~~~dl~g~------------~lL~a~~~~~aLVVs~E~~S~------------------------~~~~Gd 186 (329)
++||++.++.++|++++ +++++++.++||||++|.+|. .++|||
T Consensus 106 ~~lgl~~~~~~~~v~~~C~~~~~al~~A~~~i~~g~~~~~Lvv~~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GD 185 (338)
T PRK09258 106 HNLGLPKSCANFDVSNACLGFLNGMLDAANMIELGQIDYALVVSGESAREIVEATIDRLLAPETTREDFAQSFATLTLGS 185 (338)
T ss_pred HHcCCCCCCceeehhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEecccchhccchhhhhccCccchhhhhhccceEEecc
Confidence 99999877999999876 788999999999999998653 136899
Q ss_pred CCccc-cccccc-----ccccceeecc-----cCCCC--------Ccc-------cc-----------cc-ccc-eeeEe
Q 043382 187 DRSIL-RTTAYF-----VVAGEALKTH-----ITALG--------PLV-------LP-----------VS-EQL-LFIAT 227 (329)
Q Consensus 187 ~~sal-l~~~~~-----~~~g~aL~~d-----i~~~G--------p~v-------lP-----------~s-e~~-~~~~~ 227 (329)
+++++ |++... .+.+....++ ....+ +.. .| .+ ++. .+.+|
T Consensus 186 GA~A~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~did~~i~H 265 (338)
T PRK09258 186 GAAAAVLTRGSLHPRGHRLLGGVTRAATEHHELCQGGRDGMRTDAVGLLKEGVELAVDTWEAFLAQLGWAVEQVDRVICH 265 (338)
T ss_pred cceEEEEecCCCCCCcceeeeeeeecCCCcccccccCccceEEcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEecC
Confidence 99988 664311 1111111111 00000 000 00 00 111 24566
Q ss_pred echHHHHHHHHhcc---Ccc--ccccccCCCCcCcHHHHHHHHHHhCCCCCCCEEEEEeechhhhhhheeeee
Q 043382 228 SVGRKIFKMKIKQY---PSR--VTLYRFRNTSSSLVWYELAYAEAKRRIPKGDRICQIGFGAGFNCNTVVWPV 295 (329)
Q Consensus 228 ~~grkv~~~~v~~~---~sr--~tl~~~GNtsSaSi~~~La~~~~kgrlk~GDrV~~iafGsGf~~~sav~r~ 295 (329)
+.++++.+...+.+ ++| .++++||||||+|+|+.|++++++|++++||+|++++||+|++|+++++||
T Consensus 266 ~~~~~~~~~~~~~lgl~~~k~~~~~~~~GN~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~~~~~ 338 (338)
T PRK09258 266 QVGAAHTRAILKALGIDPEKVFTTFPTLGNMGPASLPITLAMAAEEGFLKPGDRVALLGIGSGLNCSMLEVKW 338 (338)
T ss_pred CCCHHHHHHHHHHhCCCHHHceehHhhhCCcHHhHHHHHHHHHHHhCCCCCCCEEEEEEechhHhhHhHeeeC
Confidence 77777776666655 345 678999999999999999999999999999999999999999999999987
No 21
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.97 E-value=1.2e-29 Score=242.84 Aligned_cols=215 Identities=19% Similarity=0.235 Sum_probs=163.3
Q ss_pred HHHHHHcCCCceEeccCCCCCCCCCchhHHHHHhhchHHHHHHHHHHHHhcCCCCCCcCEEEEeccC-CCCCCchHHHHH
Q 043382 64 LKLLERSRIGNMTYGPKSLMDNPAENRHMKEAKKETDDVIIGAIDERLAKTGFKHKDIGILVVNSSL-FNPTPSLSAFIV 142 (329)
Q Consensus 64 ~~I~~~sGI~~R~~~~~~~~~~pe~~~~ma~~~~ea~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~-~~~~Ps~aa~I~ 142 (329)
+++.+++||++|++++++ |+..+|+ .+|+++||+++|++|+|||.||+++++ ++..|+.+..|+
T Consensus 33 ~~i~~~~Gi~~r~~~~~~-----~~~~~la----------~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~a~~l~ 97 (325)
T PRK12879 33 EWIVQRTGIKERRIAHVE-----EYTSDLA----------IKAAERALARAGLDAEDIDLIIVATTTPDYLFPSTASQVQ 97 (325)
T ss_pred HHhhhccCceEEEECCCC-----CCHHHHH----------HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHH
Confidence 568899999999999877 5777787 999999999999999999999999877 788999999999
Q ss_pred HHcCCCCCcceecccch------------HHHhcCCCCeEEEEeecCCCCC---------ccccCCCccc-cccccc--c
Q 043382 143 NHYKLRSNILSYNLGAL------------QSAQVQPNSYTLVVSTENITLG---------LYTGNDRSIL-RTTAYF--V 198 (329)
Q Consensus 143 ~~Lglr~~v~~~dl~g~------------~lL~a~~~~~aLVVs~E~~S~~---------~~~Gd~~sal-l~~~~~--~ 198 (329)
++||++ ++.+++++++ ++|++++.++||||++|.+|.. .+|||+++++ |+.... +
T Consensus 98 ~~lg~~-~~~~~~v~~~C~~~~~al~~A~~~l~~g~~~~~Lvv~~e~~s~~~~~~~~~~~~~~GDgAaA~ll~~~~~~~~ 176 (325)
T PRK12879 98 ARLGIP-NAAAFDINAACAGFLYGLETANGLITSGLYKKVLVIGAERLSKVTDYTDRTTCILFGDGAGAVVLEATENEPG 176 (325)
T ss_pred HHhCCC-CCcEEEECccchHHHHHHHHHHHHHHcCCCCEEEEEEehhhcCcCCccccCceEEEeecceEEEEEecCCCCC
Confidence 999997 5889998765 7889999999999999998631 3799999987 654221 1
Q ss_pred cccceeecc--------cCCCCCcccccc-ccceeeEeechHHHH-----------------------------------
Q 043382 199 VAGEALKTH--------ITALGPLVLPVS-EQLLFIATSVGRKIF----------------------------------- 234 (329)
Q Consensus 199 ~~g~aL~~d--------i~~~Gp~vlP~s-e~~~~~~~~~grkv~----------------------------------- 234 (329)
+....+.++ ++..|. ..|.+ +.....+++.|++++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~did~~~~h~~~~ 255 (325)
T PRK12879 177 FIDYVLGTDGDGGDILYRTGLGT-TMDRDALSGDGYIVQNGREVFKWAVRTMPKGARQVLEKAGLTKDDIDWVIPHQANL 255 (325)
T ss_pred eEEEEEEEcCCCCCeEEEcCCCC-CCCccccccCccEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCH
Confidence 111112111 112221 11111 111223344444443
Q ss_pred ---HHHHhcc---Ccc--ccccccCCCCcCcHHHHHHHHHHhCCCCCCCEEEEEeechhhhhhheeeee
Q 043382 235 ---KMKIKQY---PSR--VTLYRFRNTSSSLVWYELAYAEAKRRIPKGDRICQIGFGAGFNCNTVVWPV 295 (329)
Q Consensus 235 ---~~~v~~~---~sr--~tl~~~GNtsSaSi~~~La~~~~kgrlk~GDrV~~iafGsGf~~~sav~r~ 295 (329)
+...+.+ ++| .++++||||+|+|+|+.|++++++|++++||++++++||+|++++++++||
T Consensus 256 ~~~~~~~~~lg~~~~~~~~~~~~~Gn~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~~~~~~l~~~ 324 (325)
T PRK12879 256 RIIESLCEKLGIPMEKTLVSVEYYGNTSAATIPLALDLALEQGKIKPGDTLLLYGFGAGLTWAALLVKW 324 (325)
T ss_pred HHHHHHHHHcCCCHHHhhhhHhhhCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhhEEEEEEe
Confidence 3333332 344 578999999999999999999999999999999999999999999999998
No 22
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=99.96 E-value=1.2e-29 Score=243.93 Aligned_cols=214 Identities=19% Similarity=0.253 Sum_probs=161.3
Q ss_pred HHHHHHcCCCceEeccCCCCCCCCCchhHHHHHhhchHHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHH
Q 043382 64 LKLLERSRIGNMTYGPKSLMDNPAENRHMKEAKKETDDVIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVN 143 (329)
Q Consensus 64 ~~I~~~sGI~~R~~~~~~~~~~pe~~~~ma~~~~ea~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~ 143 (329)
.+|.+++||++|+++.++ ++..+|+ .+|+++||+++|++|+|||.||++|++....++.+..+++
T Consensus 31 ~~i~~~~gi~~r~~~~~~-----~~~~~la----------~~A~~~aL~~ag~~~~dId~vi~~s~~~~~~~~~~~~v~~ 95 (326)
T CHL00203 31 HWISTRTGIKKRHLAPSS-----TSLTKLA----------AEAANKALDKAHMDPLEIDLIILATSTPDDLFGSASQLQA 95 (326)
T ss_pred hhEeeccCeEEEEeCCCC-----CCHHHHH----------HHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCchHHHHHH
Confidence 468899999999999877 4667777 9999999999999999999999998774334456889999
Q ss_pred HcCCCCCcceecccch------------HHHhcCCCCeEEEEeecCCCC---------CccccCCCccc-ccccc-cccc
Q 043382 144 HYKLRSNILSYNLGAL------------QSAQVQPNSYTLVVSTENITL---------GLYTGNDRSIL-RTTAY-FVVA 200 (329)
Q Consensus 144 ~Lglr~~v~~~dl~g~------------~lL~a~~~~~aLVVs~E~~S~---------~~~~Gd~~sal-l~~~~-~~~~ 200 (329)
+||++ ++.++|++.+ ++|+++..+++|||++|.+|. .++|||+++++ |+... .++.
T Consensus 96 ~Lg~~-~~~~~~v~~~Casg~~al~~A~~~i~sg~~~~~Lvv~~e~~s~~~~~~~~~~~~~fgDga~A~ll~~~~~~~~~ 174 (326)
T CHL00203 96 EIGAT-RAVAFDITAACSGFILALVTATQFIQNGSYKNILVVGADTLSKWIDWSDRKTCILFGDGAGAAIIGASYENSIL 174 (326)
T ss_pred HhCCC-CCceeeecccchhHHHHHHHHHHHHHcCCCCEEEEEEehhhhCcCCcccCCceEEEcceeeEEEEEEcCCCCeE
Confidence 99998 6888998765 788999999999999999884 13789999988 65432 1222
Q ss_pred cceeecc--------cCCCC-------CccccccccceeeEeechHHHHHHH----------------------------
Q 043382 201 GEALKTH--------ITALG-------PLVLPVSEQLLFIATSVGRKIFKMK---------------------------- 237 (329)
Q Consensus 201 g~aL~~d--------i~~~G-------p~vlP~se~~~~~~~~~grkv~~~~---------------------------- 237 (329)
+..+.+| ++..+ ....|. ++ ...+.+.|+++++..
T Consensus 175 ~~~~~t~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~g~~~~did~~~~h 252 (326)
T CHL00203 175 GFKLCTDGKLNSHLQLMNKPVNNQSFGTTKLPQ-GQ-YQSISMNGKEVYKFAVFQVPAVIIKCLNALNISIDEVDWFILH 252 (326)
T ss_pred EEEEEEcCCCcceEEecCCCCCccccccccccc-CC-cceEEECCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEC
Confidence 2233332 11100 000110 00 113445555555432
Q ss_pred ----------Hhcc---Ccc--ccccccCCCCcCcHHHHHHHHHHhCCCCCCCEEEEEeechhhhhhheeeee
Q 043382 238 ----------IKQY---PSR--VTLYRFRNTSSSLVWYELAYAEAKRRIPKGDRICQIGFGAGFNCNTVVWPV 295 (329)
Q Consensus 238 ----------v~~~---~sr--~tl~~~GNtsSaSi~~~La~~~~kgrlk~GDrV~~iafGsGf~~~sav~r~ 295 (329)
.+.+ ++| .++++||||||+|+|+.|++++++|++++||+|++++||+|++|+++|+||
T Consensus 253 q~~~~~~~~~~~~lgl~~~k~~~~l~~~Gn~~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~v~~~ 325 (326)
T CHL00203 253 QANKRILEAIANRLSVPNSKMITNLEKYGNTSAASIPLALDEAIQNNKIQPGQIIVLSGFGAGLTWGAIVLKW 325 (326)
T ss_pred CCCHHHHHHHHHHhCCCHHHhhhHHHhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEchhhhheEEEEEe
Confidence 2222 344 689999999999999999999999999999999999999999999999998
No 23
>PRK06840 hypothetical protein; Validated
Probab=99.96 E-value=2.9e-28 Score=235.24 Aligned_cols=216 Identities=15% Similarity=0.125 Sum_probs=161.5
Q ss_pred HHHHHHcCCCceEeccCCCCCCCCCchhHHHHHhhchHHHHHHHHHHHHhcCCCCCCcCEEEEeccC--CCCCCchHHHH
Q 043382 64 LKLLERSRIGNMTYGPKSLMDNPAENRHMKEAKKETDDVIIGAIDERLAKTGFKHKDIGILVVNSSL--FNPTPSLSAFI 141 (329)
Q Consensus 64 ~~I~~~sGI~~R~~~~~~~~~~pe~~~~ma~~~~ea~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~--~~~~Ps~aa~I 141 (329)
+++.+++||++|++++++ |+..+|+ .+|+++||+++|++|+|||.||+++++ ++..|+.+++|
T Consensus 33 ~~~~~~~Gi~~r~~~~~~-----~~~~~la----------~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~~p~~a~~l 97 (339)
T PRK06840 33 EVVIEKFGIYEKPVPGPE-----DHTSDMA----------IAAAKPALKQAGVDPAAIDVVIYIGSEHKDYPVWSSAPKI 97 (339)
T ss_pred HHHhhhcCcceEeeCCCC-----CCHHHHH----------HHHHHHHHHHcCCCHHHCCEEEEeccCCCCCCCCchHHHH
Confidence 667899999999999876 5777888 999999999999999999999987554 67899999999
Q ss_pred HHHcCCCCCcceecccch------------HHHhc-CCCCeEEEEeecCCCC--C---------ccccCCCccc-ccccc
Q 043382 142 VNHYKLRSNILSYNLGAL------------QSAQV-QPNSYTLVVSTENITL--G---------LYTGNDRSIL-RTTAY 196 (329)
Q Consensus 142 ~~~Lglr~~v~~~dl~g~------------~lL~a-~~~~~aLVVs~E~~S~--~---------~~~Gd~~sal-l~~~~ 196 (329)
++++|++ ++.++|++++ +++++ +..+++|||++|..+. + +.|||+++++ |++..
T Consensus 98 ~~~lGl~-~~~~~~v~~~C~~~~~al~~A~~~l~~~g~~~~~Lvv~~~~~s~~~~~~~~~~~~~~~~GDgAaA~ll~~~~ 176 (339)
T PRK06840 98 QHEIGAK-NAWAFDIMAVCASFPIALKVAKDLLYSDPSIENVLLVGGYRNSDLVDYDNPRTRFMFNFAAGGSAALLKKDA 176 (339)
T ss_pred HHHhCCC-CcccccccccchHHHHHHHHHHHHHhcCCCccEEEEEeecccccccCcCCCCeeeeccCCCceeEEEEEecC
Confidence 9999997 6889998876 78888 6688999999998763 1 1369999987 65421
Q ss_pred c--ccccceeecc--------cCCCCCccccccc----c-----------------------------------------
Q 043382 197 F--VVAGEALKTH--------ITALGPLVLPVSE----Q----------------------------------------- 221 (329)
Q Consensus 197 ~--~~~g~aL~~d--------i~~~Gp~vlP~se----~----------------------------------------- 221 (329)
. ++.+..+.+| ++..|. ..|.+. .
T Consensus 177 ~~~~il~~~~~t~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~ 255 (339)
T PRK06840 177 GKNRILGSAIITDGSFSEDVRVPAGGT-KQPASPETVENRQHYLDVIDPESMKERLDEVSIPNFLKVIREALRKSGYTPK 255 (339)
T ss_pred CCCceEEEEEEEcCCccceEEecCCCc-CCCCcccccccccceEEEcCcHHHHHHhHhhHHHHHHHHHHHHHHHcCCCHH
Confidence 1 1112222222 122221 111110 0
Q ss_pred -ce-eeEeechHHHHHHHHhcc---Ccc-ccccccCCCCcCcHHHHHHHHHHhCCCCCCCEEEEEeechhhhhhheeeee
Q 043382 222 -LL-FIATSVGRKIFKMKIKQY---PSR-VTLYRFRNTSSSLVWYELAYAEAKRRIPKGDRICQIGFGAGFNCNTVVWPV 295 (329)
Q Consensus 222 -~~-~~~~~~grkv~~~~v~~~---~sr-~tl~~~GNtsSaSi~~~La~~~~kgrlk~GDrV~~iafGsGf~~~sav~r~ 295 (329)
+. +++|..++++++...+.+ ++| .++++||||||+|+|+.|++++++|++++||++++++||+||+|+++++||
T Consensus 256 did~~~~h~~~~~~~~~~~~~Lgl~~~~~~~~~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~ill~~~G~G~s~~~~~l~~ 335 (339)
T PRK06840 256 DIDYLAILHMKRSAHIALLEGLGLTEEQAIYLDEYGHLGQLDQILSLHLALEQGKLKDGDLVVLVSAGTGYTWAATVIRW 335 (339)
T ss_pred HCCEEEECCcCHHHHHHHHHHcCCCHHHeEeHHhccchhhhhHHHHHHHHHHcCCCCCCCEEEEEEEehhhheeEEEEEe
Confidence 11 123333444444444433 344 568999999999999999999999999999999999999999999999999
Q ss_pred e
Q 043382 296 L 296 (329)
Q Consensus 296 ~ 296 (329)
.
T Consensus 336 ~ 336 (339)
T PRK06840 336 G 336 (339)
T ss_pred c
Confidence 3
No 24
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=99.95 E-value=6.7e-28 Score=230.19 Aligned_cols=214 Identities=18% Similarity=0.262 Sum_probs=162.7
Q ss_pred HHHHHHcCCCceEeccCCCCCCCCCchhHHHHHhhchHHHHHHHHHHHHhcCCCCCCcCEEEEeccC-CCCCCchHHHHH
Q 043382 64 LKLLERSRIGNMTYGPKSLMDNPAENRHMKEAKKETDDVIIGAIDERLAKTGFKHKDIGILVVNSSL-FNPTPSLSAFIV 142 (329)
Q Consensus 64 ~~I~~~sGI~~R~~~~~~~~~~pe~~~~ma~~~~ea~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~-~~~~Ps~aa~I~ 142 (329)
.+|.+++|+++|++..++ ++..+|+ .+|+++||+++|++|+|||.+|+++++ ++..|+.+.+++
T Consensus 31 ~~i~~~~gi~~r~~~~~~-----~~~~~la----------~~A~~~al~~agl~~~~Id~~i~~~~~~~~~~~~~a~~l~ 95 (318)
T TIGR00747 31 EWIVTRTGIKERRIAADD-----ETSSTMG----------FEAAKRAIENAGISKDDIDLIIVATTTPDHAFPSAACMVQ 95 (318)
T ss_pred HHeecccCceEEEECCCC-----CCHHHHH----------HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCChHHHHHH
Confidence 457889999999999777 5777888 999999999999999999999999877 678899999999
Q ss_pred HHcCCCCCcceecccch------------HHHhcCCCCeEEEEeecCCCC--C-------ccccCCCccc-cccccc--c
Q 043382 143 NHYKLRSNILSYNLGAL------------QSAQVQPNSYTLVVSTENITL--G-------LYTGNDRSIL-RTTAYF--V 198 (329)
Q Consensus 143 ~~Lglr~~v~~~dl~g~------------~lL~a~~~~~aLVVs~E~~S~--~-------~~~Gd~~sal-l~~~~~--~ 198 (329)
+++|++ ++.+++++++ +++++++.+++|||++|..+. + ++|||+++++ |++... +
T Consensus 96 ~~lGl~-~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~~Lvv~~e~~~~~~~~~~~~~~~~~GDGAaA~lL~~~~~~~~ 174 (318)
T TIGR00747 96 AYLGIK-GIPAFDLSAACAGFIYALSVAKQYIESGKYKTVLVVGAEKLSSTLDWTDRGTCVLFGDGAGAVVLGESEDPGG 174 (318)
T ss_pred HHhCCC-CCcEeehhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEehhhcCcCCcCCCCeEEEEecceeEEEEeecCCCCc
Confidence 999998 5888888655 788999999999999999762 1 3689999988 665321 1
Q ss_pred cccceeecc--------cCCCCCccccccc-----------------------------------cc-eeeEeechHHHH
Q 043382 199 VAGEALKTH--------ITALGPLVLPVSE-----------------------------------QL-LFIATSVGRKIF 234 (329)
Q Consensus 199 ~~g~aL~~d--------i~~~Gp~vlP~se-----------------------------------~~-~~~~~~~grkv~ 234 (329)
+......+| ++..+.. +.+. +. .+.+|..++++.
T Consensus 175 i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~di~~~~~h~~~~~~~ 252 (318)
T TIGR00747 175 IISTHLGADGTQGEALYLPAGGRP--TSGPSPFITMEGNEVFKHAVRKMGDVVEETLEANGLDPEDIDWFVPHQANLRII 252 (318)
T ss_pred EEEEEEEEcCCCcceEEECCCCcC--CCCCCCceEECCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHHH
Confidence 111222222 1111100 0000 01 123444444544
Q ss_pred HHHHhcc---Ccc--ccccccCCCCcCcHHHHHHHHHHhCCCCCCCEEEEEeechhhhhhheeeee
Q 043382 235 KMKIKQY---PSR--VTLYRFRNTSSSLVWYELAYAEAKRRIPKGDRICQIGFGAGFNCNTVVWPV 295 (329)
Q Consensus 235 ~~~v~~~---~sr--~tl~~~GNtsSaSi~~~La~~~~kgrlk~GDrV~~iafGsGf~~~sav~r~ 295 (329)
+...+.+ ++| .++++||||+|+|+|+.|++++++|++++||+|++++||+|++|+++++||
T Consensus 253 ~~~~~~lgi~~~k~~~~~~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~vll~~~G~G~t~~~~~l~~ 318 (318)
T TIGR00747 253 EALAKRLELDMSQVVKTVHKYGNTSAASIPLALDELLRTGRIKPGDLLLLVAFGGGLTWGAALVRF 318 (318)
T ss_pred HHHHHHcCCCHHHeeehHhhhCCHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEehhheeeEEEEEC
Confidence 4444443 345 689999999999999999999999999999999999999999999999997
No 25
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=99.95 E-value=9.9e-28 Score=228.34 Aligned_cols=213 Identities=19% Similarity=0.289 Sum_probs=162.0
Q ss_pred HHHHHHcCCCceEeccCCCCCCCCCchhHHHHHhhchHHHHHHHHHHHHhcCCCCCCcCEEEEeccC-CCCCCchHHHHH
Q 043382 64 LKLLERSRIGNMTYGPKSLMDNPAENRHMKEAKKETDDVIIGAIDERLAKTGFKHKDIGILVVNSSL-FNPTPSLSAFIV 142 (329)
Q Consensus 64 ~~I~~~sGI~~R~~~~~~~~~~pe~~~~ma~~~~ea~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~-~~~~Ps~aa~I~ 142 (329)
+++.+++||++|++++++ ++..+|+ .+|++++|+++|++++|||.||+++++ ++..|+.+..|+
T Consensus 30 ~~~~~~~Gi~~r~~~~~~-----~~~~~la----------~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~~~~l~ 94 (320)
T cd00830 30 EWIRTRTGIRERRIADPG-----ETTSDLA----------VEAAKKALEDAGIDADDIDLIIVATSTPDYLFPATACLVQ 94 (320)
T ss_pred HHhhhccCceEEeeCCCC-----CCHHHHH----------HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHH
Confidence 678899999999999877 4667888 999999999999999999999999877 567899999999
Q ss_pred HHcCCCCCcceecccch------------HHHhcCCCCeEEEEeecCCCCC---------ccccCCCccc-cccccc--c
Q 043382 143 NHYKLRSNILSYNLGAL------------QSAQVQPNSYTLVVSTENITLG---------LYTGNDRSIL-RTTAYF--V 198 (329)
Q Consensus 143 ~~Lglr~~v~~~dl~g~------------~lL~a~~~~~aLVVs~E~~S~~---------~~~Gd~~sal-l~~~~~--~ 198 (329)
+++|++ ++.+++++++ +++++++.+++|||++|.++.. ++|||+++++ |+.... +
T Consensus 95 ~~lg~~-~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~GDgAaA~ll~~~~~~~~ 173 (320)
T cd00830 95 ARLGAK-NAAAFDINAACSGFLYGLSTAAGLIRSGGAKNVLVVGAETLSRILDWTDRSTAVLFGDGAGAVVLEATEEDPG 173 (320)
T ss_pred HHhCCC-CCcEeeccccchHHHHHHHHHHHHHHcCCCCEEEEEEehhhccccCcccCCceEEEeccceEEEEEecCCCCc
Confidence 999997 7899988765 7889999999999999998731 3799999988 654221 1
Q ss_pred cccceeecc--------cCCCCCcccccccc---------------------------------------c-eeeEeech
Q 043382 199 VAGEALKTH--------ITALGPLVLPVSEQ---------------------------------------L-LFIATSVG 230 (329)
Q Consensus 199 ~~g~aL~~d--------i~~~Gp~vlP~se~---------------------------------------~-~~~~~~~g 230 (329)
+.+....++ ++..+ ...|..+. . .+.+|..+
T Consensus 174 i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~g~~~~di~~~~~h~~~ 252 (320)
T cd00830 174 ILDSVLGSDGSGADLLTIPAGG-SRSPFEDAEGGDPYLVMDGREVFKFAVRLMPESIEEALEKAGLTPDDIDWFVPHQAN 252 (320)
T ss_pred EEEEEEEEcCCCCCeEEeCCCC-cCCccccccccCccEEEcChHHHHHHHHhhHHHHHHHHHHcCCCHHHCCEEEECCCC
Confidence 222222221 11111 11121100 0 12334444
Q ss_pred HHHHHHHHhcc---Ccc--ccccccCCCCcCcHHHHHHHHHHhCCCCCCCEEEEEeechhhhhhheee
Q 043382 231 RKIFKMKIKQY---PSR--VTLYRFRNTSSSLVWYELAYAEAKRRIPKGDRICQIGFGAGFNCNTVVW 293 (329)
Q Consensus 231 rkv~~~~v~~~---~sr--~tl~~~GNtsSaSi~~~La~~~~kgrlk~GDrV~~iafGsGf~~~sav~ 293 (329)
+++.+...+.+ ++| .++++|||++|+|+|+.|+++.++|++++||++++++||+|++|+++++
T Consensus 253 ~~~~~~~~~~lgl~~~~~~~~~~~~Gn~~sas~~~~L~~~~~~~~~~~G~~vll~~~G~G~~~~~~l~ 320 (320)
T cd00830 253 LRIIEAVAKRLGLPEEKVVVNLDRYGNTSAASIPLALDEAIEEGKLKKGDLVLLLGFGAGLTWGAALL 320 (320)
T ss_pred HHHHHHHHHHhCCCHHHhhhhHHhhCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchHHhhHHhhC
Confidence 44444443333 344 6799999999999999999999999999999999999999999999874
No 26
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=99.95 E-value=9.9e-28 Score=233.12 Aligned_cols=219 Identities=14% Similarity=0.140 Sum_probs=164.5
Q ss_pred HHHHHHcCCCceEeccCCCCCCCCCchhHHHHHhhchHHHHHHHHHHHHhcCCCCCCcCEEEEeccC-CCCCCchHHHHH
Q 043382 64 LKLLERSRIGNMTYGPKSLMDNPAENRHMKEAKKETDDVIIGAIDERLAKTGFKHKDIGILVVNSSL-FNPTPSLSAFIV 142 (329)
Q Consensus 64 ~~I~~~sGI~~R~~~~~~~~~~pe~~~~ma~~~~ea~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~-~~~~Ps~aa~I~ 142 (329)
+||.+++||++|++++++ |+..+|+ .+|+++||+++|++|+|||.||++|++ ++..|+.+..|+
T Consensus 30 ~~i~~~~Gi~~r~v~~~~-----~~~~~la----------~~Aa~~aL~~agl~~~dID~li~~s~~~~~~~p~~a~~v~ 94 (345)
T TIGR00748 30 ESISNGLPVEEKAVPGLD-----EDTATIG----------VEAARNALKRAKIDPKDIGAVYVGSESHPYAVKPTATIVA 94 (345)
T ss_pred hHeeeccceeeeecCCCC-----CCHHHHH----------HHHHHHHHHHcCCCHHHCCEEEEEecCCCccccchHHHHH
Confidence 678899999999999877 5878888 999999999999999999999998876 577899999999
Q ss_pred HHcCCCCCcceecccch------------HHHhcCCCCeEEEEeecCCCC------CccccCCCccc-ccccc--ccccc
Q 043382 143 NHYKLRSNILSYNLGAL------------QSAQVQPNSYTLVVSTENITL------GLYTGNDRSIL-RTTAY--FVVAG 201 (329)
Q Consensus 143 ~~Lglr~~v~~~dl~g~------------~lL~a~~~~~aLVVs~E~~S~------~~~~Gd~~sal-l~~~~--~~~~g 201 (329)
++||++.++.++|++++ ++++++..+++|||++|..+. .+.|||+++++ |+... ..+.+
T Consensus 95 ~~LGl~~~~~~~dv~~aC~g~~~al~~A~~~i~sg~~~~vLVv~~d~~~~~~~~~~~~~~GDGAaA~vl~~~~~~~~~~~ 174 (345)
T TIGR00748 95 EAIGATPDLTAADLEFACKAGTAGIQACMGLVASGMIKYGLAIGADTAQGAPGDALEYTAGAGGAAYIIGEKNTVAYFEG 174 (345)
T ss_pred HHcCCCCCceEEEHHHhHHHHHHHHHHHHHHHHcCCCCEEEEEEEeecccCCCccCcccCCCceEEEEEccCCcceEeec
Confidence 99999867899999776 788999999999999999863 24679998877 65321 01101
Q ss_pred -ceeecccCC----CCCcccccc-----------------------------ccc-eeeEeechHHHHHHHHhcc---Cc
Q 043382 202 -EALKTHITA----LGPLVLPVS-----------------------------EQL-LFIATSVGRKIFKMKIKQY---PS 243 (329)
Q Consensus 202 -~aL~~di~~----~Gp~vlP~s-----------------------------e~~-~~~~~~~grkv~~~~v~~~---~s 243 (329)
..+.+|.+. .+. ..|.. ++. .+.+|+..++..+...+.+ ++
T Consensus 175 ~~~~~~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgl~~e 253 (345)
T TIGR00748 175 TYSYTTDTPDFWRREGE-PYPRHGGRFTGEPAYFHHVVTAAKGLMEKLGLTPEDFDYAVFHQPNGKFYLVAARMLGFPKE 253 (345)
T ss_pred ccceecccccccccCCC-cCCCcCCeecChHHHHHHHHHHHHHHHHHcCCCHHHcCEEEeCCCChHHHHHHHHHcCCCHH
Confidence 112221110 000 00100 001 1345555555555555544 34
Q ss_pred c--c--cccccCCCCcCcHHHHHHHHHHhCCCCCCCEEEEEeechhhhhhheeeeeeccCC
Q 043382 244 R--V--TLYRFRNTSSSLVWYELAYAEAKRRIPKGDRICQIGFGAGFNCNTVVWPVLKTIN 300 (329)
Q Consensus 244 r--~--tl~~~GNtsSaSi~~~La~~~~kgrlk~GDrV~~iafGsGf~~~sav~r~~~~~~ 300 (329)
| . +.++||||||+|+|+.|++.++ ++++||+|++++||+|++|++++|+|.+...
T Consensus 254 k~~~~~~~~~~GNt~sAsipl~L~~~~~--~~~~Gd~vll~~~G~G~s~~~~~~~~~~~~~ 312 (345)
T TIGR00748 254 QVKPGLLTPRIGNTYSGATPVGLSAVLD--IAEPGDRILAVSYGSGAGSDAFSIVVQDAIE 312 (345)
T ss_pred HeeccccccccCchhhhHHHHHHHHHHH--hcCCCCEEEEEEecCCcceeEEEEEEchhHH
Confidence 5 3 2379999999999999999986 6899999999999999999999999976544
No 27
>PRK04262 hypothetical protein; Provisional
Probab=99.95 E-value=4.5e-27 Score=228.28 Aligned_cols=218 Identities=14% Similarity=0.129 Sum_probs=166.0
Q ss_pred HHHHHHcCCCceEeccCCCCCCCCCchhHHHHHhhchHHHHHHHHHHHHhcCCCCCCcCEEEEeccC-CCCCCchHHHHH
Q 043382 64 LKLLERSRIGNMTYGPKSLMDNPAENRHMKEAKKETDDVIIGAIDERLAKTGFKHKDIGILVVNSSL-FNPTPSLSAFIV 142 (329)
Q Consensus 64 ~~I~~~sGI~~R~~~~~~~~~~pe~~~~ma~~~~ea~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~-~~~~Ps~aa~I~ 142 (329)
+||.+++||++|++++++ ++..+|+ .+|+++||+++|++|+|||.||++|++ ++..|+.+++|+
T Consensus 31 ~~i~~~~Gi~~R~~~~~~-----~~~~~la----------~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~~p~~a~~v~ 95 (347)
T PRK04262 31 EAIKRGLGVEEKSVPGPD-----EDTATIA----------VEAARNALKRAGIDPKEIGAVYVGSESHPYAVKPTATIVA 95 (347)
T ss_pred HHHhhccCeeeeecCCCC-----cCHHHHH----------HHHHHHHHHHcCCCHHHCCEEEEEecCCCcccccHHHHHH
Confidence 679999999999999877 5778888 999999999999999999999999877 678899999999
Q ss_pred HHcCCCCCcceecccch------------HHHhcCCCCeEEEEeecCCCC------CccccCCCccc-ccccc--ccccc
Q 043382 143 NHYKLRSNILSYNLGAL------------QSAQVQPNSYTLVVSTENITL------GLYTGNDRSIL-RTTAY--FVVAG 201 (329)
Q Consensus 143 ~~Lglr~~v~~~dl~g~------------~lL~a~~~~~aLVVs~E~~S~------~~~~Gd~~sal-l~~~~--~~~~g 201 (329)
++||+++++.++|++++ +++++++.++||||++|.... .+.+||+++++ |++.- ..+.+
T Consensus 96 ~~Lgl~~~~~~~dv~~~C~~~~~aL~~A~~~i~sg~~~~aLVv~~e~~~~~~~~~~~~~~GDGA~A~ll~~~~~~~~i~~ 175 (347)
T PRK04262 96 EALGATPDLTAADLEFACKAGTAALQAAMGLVKSGMIKYALAIGADTAQGAPGDALEYTAAAGGAAFIIGKEEVIAEIEA 175 (347)
T ss_pred HHcCCCCCceEEEHHHhHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeeccCCCCCCCCcCCCCcEEEEEecCcccceeec
Confidence 99999867889998765 788999999999999998532 24679999887 55311 00111
Q ss_pred c-eeecc----cCCCCCccccc-----c------------------------ccc-eeeEeechHHHHHHHHhcc---Cc
Q 043382 202 E-ALKTH----ITALGPLVLPV-----S------------------------EQL-LFIATSVGRKIFKMKIKQY---PS 243 (329)
Q Consensus 202 ~-aL~~d----i~~~Gp~vlP~-----s------------------------e~~-~~~~~~~grkv~~~~v~~~---~s 243 (329)
. ....| +...|. ..|. + +++ .+.+|+.++++.+...+.+ ++
T Consensus 176 ~~~~~~d~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~Lgl~~e 254 (347)
T PRK04262 176 TYSYTTDTPDFWRREGE-PYPRHGGRFTGEPAYFKHIISAAKGLMEKLGLKPSDYDYAVFHQPNGKFPLRVAKMLGFTKE 254 (347)
T ss_pred cccccccchhhcCCCCC-cCCCcCceecchHHHHHHHHHHHHHHHHHhCcCHHHhceeecCCCchHHHHHHHHHcCCCHH
Confidence 0 01111 000010 0000 0 011 2456777777777766665 34
Q ss_pred c----ccccccCCCCcCcHHHHHHHHHHhCCCCCCCEEEEEeechhhhhhheeeeeeccC
Q 043382 244 R----VTLYRFRNTSSSLVWYELAYAEAKRRIPKGDRICQIGFGAGFNCNTVVWPVLKTI 299 (329)
Q Consensus 244 r----~tl~~~GNtsSaSi~~~La~~~~kgrlk~GDrV~~iafGsGf~~~sav~r~~~~~ 299 (329)
| .++++||||||+|+|+.|+++++ ++++||+|++++||+|+++.+.+|+|.+..
T Consensus 255 k~~~~~~~~~~GNt~sAsi~~~L~~~~~--~~~~Gd~vll~~~G~G~~~~~~~~~~~~~~ 312 (347)
T PRK04262 255 QVKPGLLTPYIGNTYSGSALLGLAAVLD--VAKPGDRILVVSFGSGAGSDAFSITVTDAI 312 (347)
T ss_pred HhhccchhhhhCChHHHHHHHHHHHHHH--hCCCCCEEEEEecCCCcceeeEEEEechhH
Confidence 4 24799999999999999999987 489999999999999999999999996554
No 28
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.94 E-value=1.3e-26 Score=227.71 Aligned_cols=221 Identities=15% Similarity=0.133 Sum_probs=159.2
Q ss_pred HHHHHHcCCCceEeccCCCCCCCCCchhHHHHHhhchHHHHHHHHHHHHhcCCCCCCcCEEEEeccC-CCCCCchHHHHH
Q 043382 64 LKLLERSRIGNMTYGPKSLMDNPAENRHMKEAKKETDDVIIGAIDERLAKTGFKHKDIGILVVNSSL-FNPTPSLSAFIV 142 (329)
Q Consensus 64 ~~I~~~sGI~~R~~~~~~~~~~pe~~~~ma~~~~ea~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~-~~~~Ps~aa~I~ 142 (329)
+||++++||++||++.++.....++..+| +.+|+++||+++|++|+|||.||++|++ ++..|+.+..|+
T Consensus 38 ~~i~~~~Gi~~R~~~~~~~~~~~~~~~~L----------a~~A~~~aL~~agi~~~dId~li~~s~~~~~~~p~~a~~v~ 107 (378)
T PRK06816 38 RIILRNNGIKTRHYALDPEGRPTHSNAQM----------AAEAIRDLLDDAGFSLGDIELLACGTSQPDQLMPGHASMVH 107 (378)
T ss_pred HHHHHhCCCceEEEEECCCCCCCCCHHHH----------HHHHHHHHHHHcCCCHHHCCEEEEEECCCCcCChHHHHHHH
Confidence 68999999999999854311000133344 4999999999999999999999999877 588999999999
Q ss_pred HHcCCCCCcceecccch------------HHHhcCCCCeEEEEeecCCCC------------------------------
Q 043382 143 NHYKLRSNILSYNLGAL------------QSAQVQPNSYTLVVSTENITL------------------------------ 180 (329)
Q Consensus 143 ~~Lglr~~v~~~dl~g~------------~lL~a~~~~~aLVVs~E~~S~------------------------------ 180 (329)
++||++ ++.++|++++ +++++++.++||||++|.+|.
T Consensus 108 ~~Lgl~-~~~~~~v~~~Cas~~~al~~A~~~i~sg~~~~vLvv~~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (378)
T PRK06816 108 GELGAP-PIEVVSSAGVCAAGMMALKYAYLSVKAGESRNAVATASELASRWFRASRFEAEEEKLAELEENPEIAFEKDFL 186 (378)
T ss_pred hhCCCC-CCceeeecCcCHHHHHHHHHHHHHHHCCCCCEEEEEeEccchhhhhhhhhhhHHHHhhcCcccCCCCCCCCCC
Confidence 999998 5889998765 778899999999999999862
Q ss_pred CccccCCCccc-cccccc--cc-cccee---ecc-------cCCCCCcccc------cc----c----------------
Q 043382 181 GLYTGNDRSIL-RTTAYF--VV-AGEAL---KTH-------ITALGPLVLP------VS----E---------------- 220 (329)
Q Consensus 181 ~~~~Gd~~sal-l~~~~~--~~-~g~aL---~~d-------i~~~Gp~vlP------~s----e---------------- 220 (329)
.|+|||+++++ |++... +. ..... .++ .+.+|. ..| +. +
T Consensus 187 ~~~fGDGA~A~vl~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (378)
T PRK06816 187 RWMLSDGAGAVLLENKPRPDGLSLRIDWIDLRSYAGELPVCMYAGAE-KNEDGSLKGWSDYPPEEAEAASALSLKQDVRL 265 (378)
T ss_pred CEeeecccEEEEEEecCCCCCceEEEEEEeeecccccCccceecCCc-cCCCCCccCcccCCHHHHHhccCchHHhHHHH
Confidence 13689999987 664321 11 00000 000 001110 000 00 0
Q ss_pred -------------------------cc-eeeEeechHHHHHHHHhc-------c-Ccc--ccccccCCCCcCcHHHHHHH
Q 043382 221 -------------------------QL-LFIATSVGRKIFKMKIKQ-------Y-PSR--VTLYRFRNTSSSLVWYELAY 264 (329)
Q Consensus 221 -------------------------~~-~~~~~~~grkv~~~~v~~-------~-~sr--~tl~~~GNtsSaSi~~~La~ 264 (329)
+. .++.|+...++.+...+. + ++| .++++||||+|||+|+.|++
T Consensus 266 ~~~~~~~~~~~~i~~~L~~~gl~~~DId~~v~Hq~n~~~~~~v~~~l~~~~~gl~~~k~~~~~~~~GNt~sAsipi~L~~ 345 (378)
T PRK06816 266 LNENIVVYTIKPLLELVDKRNLDPDDIDYFLPHYSSEYFREKIVELLAKAGFMIPEEKWFTNLATVGNTGSASIYIMLDE 345 (378)
T ss_pred HHHHhHHHHHHHHHHHHHHcCCChhhCCEEeeCcccHHHHHHHHHHHHhccCCCChhheEEeccccccccchHHHHHHHH
Confidence 00 123444455554444442 2 355 68999999999999999999
Q ss_pred HHHhCCCCCCCEEEEEeechh-hhhhheeeeee
Q 043382 265 AEAKRRIPKGDRICQIGFGAG-FNCNTVVWPVL 296 (329)
Q Consensus 265 ~~~kgrlk~GDrV~~iafGsG-f~~~sav~r~~ 296 (329)
++++|++++||+|++++.|+| |+++.+++.|.
T Consensus 346 a~~~g~~~~Gd~vl~~~~~s~~~~~~~~~~~~~ 378 (378)
T PRK06816 346 LLNSGRLKPGQKILCFVPESGRFSTAFMLLTVV 378 (378)
T ss_pred HHHcCCCCCCCEEEEEEecccchhheeEEEEEC
Confidence 999999999999999988777 99999999873
No 29
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.94 E-value=3.1e-26 Score=218.61 Aligned_cols=216 Identities=18% Similarity=0.255 Sum_probs=160.4
Q ss_pred HHHHHHcCCCceEeccCCCCCCCCCchhHHHHHhhchHHHHHHHHHHHHhcCCCCCCcCEEEEeccC-CCCCCchHHHHH
Q 043382 64 LKLLERSRIGNMTYGPKSLMDNPAENRHMKEAKKETDDVIIGAIDERLAKTGFKHKDIGILVVNSSL-FNPTPSLSAFIV 142 (329)
Q Consensus 64 ~~I~~~sGI~~R~~~~~~~~~~pe~~~~ma~~~~ea~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~-~~~~Ps~aa~I~ 142 (329)
++|.+++||++|+++.++ ++..+|+ .+|++++|+++|++++|||.+|++|++ +...|+.+..|+
T Consensus 32 ~~i~~~~gi~~r~~~~~~-----~~~~~la----------~~A~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~~~i~ 96 (319)
T PRK09352 32 EWIVTRTGIKERRIAAPD-----ETTSDLA----------TEAAKKALEAAGIDPEDIDLIIVATTTPDYAFPSTACLVQ 96 (319)
T ss_pred HHhhhhcCeEEEEeCCCC-----CCHHHHH----------HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHH
Confidence 567889999999988766 4667777 999999999999999999999998877 567899999999
Q ss_pred HHcCCCCCcceecccch------------HHHhcCCCCeEEEEeecCCCCC---------ccccCCCccc-cccccc-cc
Q 043382 143 NHYKLRSNILSYNLGAL------------QSAQVQPNSYTLVVSTENITLG---------LYTGNDRSIL-RTTAYF-VV 199 (329)
Q Consensus 143 ~~Lglr~~v~~~dl~g~------------~lL~a~~~~~aLVVs~E~~S~~---------~~~Gd~~sal-l~~~~~-~~ 199 (329)
+++|++ ++..++++++ +++++++.+++||+++|.+|.. ++|||+++++ |++... ++
T Consensus 97 ~~lG~~-~~~~~~v~~~Casg~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~gDGaaA~ll~~~~~~~~ 175 (319)
T PRK09352 97 ARLGAK-NAAAFDLSAACSGFVYALSTADQFIRSGAYKNVLVIGAEKLSRIVDWTDRSTCVLFGDGAGAVVLGASEEPGI 175 (319)
T ss_pred HHhCCC-CCcEeeccccchhHHHHHHHHHHHHHcCCCCEEEEEEehhhccccCcccCCceEEEeccceEEEEEEcCCCCe
Confidence 999996 6888888655 7889999999999999997731 2789999987 664321 11
Q ss_pred ccceeecc--------cCCCCCccccccc----------------------------------cce-eeEeechHHHHHH
Q 043382 200 AGEALKTH--------ITALGPLVLPVSE----------------------------------QLL-FIATSVGRKIFKM 236 (329)
Q Consensus 200 ~g~aL~~d--------i~~~Gp~vlP~se----------------------------------~~~-~~~~~~grkv~~~ 236 (329)
.+..+.++ ++..+. ..|.+. +.. +..|..++++.+.
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~g~~~~di~~~~~h~~~~~~~~~ 254 (319)
T PRK09352 176 LSTHLGSDGSYGDLLYLPGGGS-RGPASPGYLRMEGREVFKFAVRELAKVAREALEAAGLTPEDIDWLVPHQANLRIIDA 254 (319)
T ss_pred EEEEEEEcCCCCCeEEeCCCCC-CCCCCCCceEECCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHHHHH
Confidence 11122221 111110 111100 011 1233334444443
Q ss_pred HHhcc---Ccc--ccccccCCCCcCcHHHHHHHHHHhCCCCCCCEEEEEeechhhhhhheeeeee
Q 043382 237 KIKQY---PSR--VTLYRFRNTSSSLVWYELAYAEAKRRIPKGDRICQIGFGAGFNCNTVVWPVL 296 (329)
Q Consensus 237 ~v~~~---~sr--~tl~~~GNtsSaSi~~~La~~~~kgrlk~GDrV~~iafGsGf~~~sav~r~~ 296 (329)
..+.+ ++| .++++|||++|+++++.|++++++|++++||++++++||+||+|+++++||.
T Consensus 255 ~~~~lg~~~~~~~~~~~~~Gn~~~a~~~~~L~~~~~~g~~~~Gd~vll~s~G~G~~~~~~ll~~~ 319 (319)
T PRK09352 255 TAKKLGLPMEKVVVTVDKYGNTSAASIPLALDEAVRDGRIKRGDLVLLEGFGGGLTWGAALVRWP 319 (319)
T ss_pred HHHHhCCCHHHhhhhHHhhCCHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhheeEEEEEEeC
Confidence 33333 234 5789999999999999999999999999999999999999999999999983
No 30
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.94 E-value=4.1e-26 Score=223.40 Aligned_cols=229 Identities=18% Similarity=0.179 Sum_probs=157.4
Q ss_pred HHHHHHHcCCCceEeccCC-C---CCCCC-CchhHHHHHhhchHHHHHHHHHHHHhcCCCCCCcCEEEEeccC-CCCCCc
Q 043382 63 LLKLLERSRIGNMTYGPKS-L---MDNPA-ENRHMKEAKKETDDVIIGAIDERLAKTGFKHKDIGILVVNSSL-FNPTPS 136 (329)
Q Consensus 63 ~~~I~~~sGI~~R~~~~~~-~---~~~pe-~~~~ma~~~~ea~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~-~~~~Ps 136 (329)
.+||.+++||++|+++.++ . ...++ ...........+.+|+.+|+++||+++|++++|||.||++|++ +...|+
T Consensus 54 ~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~la~~Aa~~aL~~agl~~~~Id~li~~~~~~~~~~p~ 133 (372)
T PRK07515 54 SEFIEKASGIKSRYVMDKEGILDPDRMRPRIPERSNDELSIQAEMGVAAARQALARAGRTAEDIDAVIVACSNMQRAYPA 133 (372)
T ss_pred HHHhhhccCCceEEEecccccCcccccCcccccccccchhhHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcH
Confidence 4789999999999998532 0 00000 0000011112345788999999999999999999999999877 688999
Q ss_pred hHHHHHHHcCCCCCcceecccch------------HHHhcCCCCeEEEEeecCCCC---------CccccCCCccc-ccc
Q 043382 137 LSAFIVNHYKLRSNILSYNLGAL------------QSAQVQPNSYTLVVSTENITL---------GLYTGNDRSIL-RTT 194 (329)
Q Consensus 137 ~aa~I~~~Lglr~~v~~~dl~g~------------~lL~a~~~~~aLVVs~E~~S~---------~~~~Gd~~sal-l~~ 194 (329)
.+++|+++||++ ..+++++.+ ++|+++..++||||++|.+|. .++|||+++++ |++
T Consensus 134 ~a~~v~~~Lgl~--~~~~~v~~aCasg~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~d~~~~~lfGDgAaA~vL~~ 211 (372)
T PRK07515 134 MAIEIQQALGIE--GFAFDMNVACSSATFGIQTAANAIRSGSARRVLVVNPEICSGHLNFRDRDSHFIFGDVATAVIVER 211 (372)
T ss_pred HHHHHHHhcCCC--CcEEEecchhHHHHHHHHHHHHHHHcCCCCEEEEEeeecccccccccCCCCCEEecCccEEEEEee
Confidence 999999999997 567777755 788999999999999999872 14799999988 664
Q ss_pred ccc-------ccccceeecc----cCC-CC--Ccccccc--------------------------------------ccc
Q 043382 195 AYF-------VVAGEALKTH----ITA-LG--PLVLPVS--------------------------------------EQL 222 (329)
Q Consensus 195 ~~~-------~~~g~aL~~d----i~~-~G--p~vlP~s--------------------------------------e~~ 222 (329)
.-. .+.+....++ +.. .| ....+.. ++.
T Consensus 212 ~~~~~~~~~~~il~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~dI 291 (372)
T PRK07515 212 ADTATSAGGFEILGTRLFTQFSNNIRNNFGFLNRADPEGIGARDKLFVQEGRKVFKEVCPMVAEHIVEHLAENGLTPADV 291 (372)
T ss_pred ccccccCCCceEEEEEeecccccceecCCCCCCCCCccccccccceEEeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHC
Confidence 211 1112221111 000 11 0000000 001
Q ss_pred -eeeEeechHHHHHHHHhcc------Ccc--ccccccCCCCcCcHHHHHHHHHHhCCCCCCCEEEEEeechhhhhhheee
Q 043382 223 -LFIATSVGRKIFKMKIKQY------PSR--VTLYRFRNTSSSLVWYELAYAEAKRRIPKGDRICQIGFGAGFNCNTVVW 293 (329)
Q Consensus 223 -~~~~~~~grkv~~~~v~~~------~sr--~tl~~~GNtsSaSi~~~La~~~~kgrlk~GDrV~~iafGsGf~~~sav~ 293 (329)
.+.+|+.++++.+...+.+ ++| .++++||||||+|+|+.|+++. +++++||+|++++||+||+|+++++
T Consensus 292 d~~~~Hq~~~~~~d~~~~~llg~~~~~~~~~~~~~~~GNt~sasi~~~L~~~~--~~~~~Gd~vll~~~G~G~~~~~~ll 369 (372)
T PRK07515 292 KRFWLHQANINMNQLIGKKVLGRDATPEEAPVILDEYANTSSAGSIIAFHKHS--DDLAAGDLGVICSFGAGYSIGSVIV 369 (372)
T ss_pred CEEEECCCCHHHHHHHHHHhccCCCChhhceEeHHhcCCchhhHHHHHHHHHh--ccCCCCCEEEEEEecccHHHHHHHh
Confidence 1234555555544443331 222 6899999999999999999974 5689999999999999999999998
Q ss_pred ee
Q 043382 294 PV 295 (329)
Q Consensus 294 r~ 295 (329)
|.
T Consensus 370 ~~ 371 (372)
T PRK07515 370 RK 371 (372)
T ss_pred cc
Confidence 73
No 31
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=99.91 E-value=3.3e-24 Score=204.47 Aligned_cols=213 Identities=20% Similarity=0.307 Sum_probs=160.1
Q ss_pred HHHHHcCCCceEeccCCCCCCCCCchhHHHHHhhchHHHHHHHHHHHHhcCCCCCCcCEEEEeccC-CCCCCchHHHHHH
Q 043382 65 KLLERSRIGNMTYGPKSLMDNPAENRHMKEAKKETDDVIIGAIDERLAKTGFKHKDIGILVVNSSL-FNPTPSLSAFIVN 143 (329)
Q Consensus 65 ~I~~~sGI~~R~~~~~~~~~~pe~~~~ma~~~~ea~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~-~~~~Ps~aa~I~~ 143 (329)
++.+++||++|++..++ ++..+|+ .+|++++|+++|++++|||.||+++++ +...|+.+.+|++
T Consensus 29 ~~~~~~gi~~r~~~~~~-----~~~~~l~----------~~a~~~aL~~ag~~~~~Id~li~~~~~~~~~~~~~~~~i~~ 93 (324)
T cd00827 29 PGKYTTGIGQRHMAGDD-----EDVPTMA----------VEAARRALERAGIDPDDIGLLIVATESPIDKGKSAATYLAE 93 (324)
T ss_pred cceeeeecceeEecCCC-----CCHHHHH----------HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCccHHHHHHH
Confidence 57788999999999765 4667787 999999999999999999999999877 4668999999999
Q ss_pred HcCCCCCcceecccch------------HHHhcCCCCeEEEEeecCCCC--------CccccCCCccc-cccccc----c
Q 043382 144 HYKLRSNILSYNLGAL------------QSAQVQPNSYTLVVSTENITL--------GLYTGNDRSIL-RTTAYF----V 198 (329)
Q Consensus 144 ~Lglr~~v~~~dl~g~------------~lL~a~~~~~aLVVs~E~~S~--------~~~~Gd~~sal-l~~~~~----~ 198 (329)
++|++ ++.+++++++ ++++++..+++|||++|.++. .++|||+++++ |+.... +
T Consensus 94 ~lg~~-~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vlvv~~e~~~~~~~~~~~~~~~~gdgaaA~ll~~~~~~~~~~ 172 (324)
T cd00827 94 LLGLT-NAEAFDLKQACYGGTAALQLAANLVESGPWRYALVVASDIASYLLDEGSALEPTLGDGAAAMLVSRNPGILAAG 172 (324)
T ss_pred HcCCC-CCceeehhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEEHHhhhcccCCCCccccccCceEEEEEecCcccccCC
Confidence 99998 8999999755 788999999999999999873 25899999987 554211 1
Q ss_pred cccceeecccC---------CCC-C----------c-------ccc-------------------ccccc-eeeEeechH
Q 043382 199 VAGEALKTHIT---------ALG-P----------L-------VLP-------------------VSEQL-LFIATSVGR 231 (329)
Q Consensus 199 ~~g~aL~~di~---------~~G-p----------~-------vlP-------------------~se~~-~~~~~~~gr 231 (329)
+......++.. ..+ + . ..+ .+++. .+..|+.++
T Consensus 173 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~h~~~~ 252 (324)
T cd00827 173 IVSTHSTSDPGYDFSPYPVMDGGYPKPCKLAYAIRLTAEPAGRAVFEAAHKLIAKVVRKALDRAGLSEDIDYFVPHQPNG 252 (324)
T ss_pred ceeeeeecccccccCccceeccCCCcchhhhhhcceeecCCccchHHHHhHHHHHHHHHHHHHcccccccceeeccCchH
Confidence 21111211100 000 0 0 000 00011 234556666
Q ss_pred -HHHHHHHhcc--------Cccc-cccccCCCCcCcHHHHHHHHHHhCCCCCCCEEEEEeechhhhhhheee
Q 043382 232 -KIFKMKIKQY--------PSRV-TLYRFRNTSSSLVWYELAYAEAKRRIPKGDRICQIGFGAGFNCNTVVW 293 (329)
Q Consensus 232 -kv~~~~v~~~--------~sr~-tl~~~GNtsSaSi~~~La~~~~kgrlk~GDrV~~iafGsGf~~~sav~ 293 (329)
.+.+...+.+ .++. ++++||||+|+|+|+.|+++++++++++||+|++++||+|++++++++
T Consensus 253 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~~~~~~Gd~vl~~~~G~G~~~~~~~~ 324 (324)
T cd00827 253 KKILEAVAKKLGGPPEKASQTRWILLRRVGNMYAASILLGLASLLESGKLKAGDRVLLFSYGSGFTAEAFVL 324 (324)
T ss_pred HHHHHHHHHHccchHhhhccchhhHHHHhCchHHHHHHHHHHHHHhcCCCCCCCEEEEEEeccchhheeccC
Confidence 6666555444 2332 799999999999999999999999999999999999999999998764
No 32
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=99.89 E-value=3.9e-22 Score=196.31 Aligned_cols=214 Identities=15% Similarity=0.179 Sum_probs=154.1
Q ss_pred HHHHHHcCCCceEeccCCCCCCCCCchhHHHHHhhchHHHHHHHHHHHHhcCCCCCCcCEEEEeccC-CCCCCchHHHHH
Q 043382 64 LKLLERSRIGNMTYGPKSLMDNPAENRHMKEAKKETDDVIIGAIDERLAKTGFKHKDIGILVVNSSL-FNPTPSLSAFIV 142 (329)
Q Consensus 64 ~~I~~~sGI~~R~~~~~~~~~~pe~~~~ma~~~~ea~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~-~~~~Ps~aa~I~ 142 (329)
+|+.+.+|+++|++.+++ |+..+|+ .+|+++||+++ +|+|||.||++|++ ++..|+.+..|+
T Consensus 29 ~~~~~g~G~~~~~~~~~~-----ed~~~la----------~~Aa~~aL~~a--~~~~Id~li~~t~s~~~~~~s~a~~v~ 91 (379)
T TIGR01835 29 EKFHIGIGQKKMAVPPID-----EDIVTMA----------ASAAKPILDRN--DKQKIDMVIFGTESGIDQSKAAAVYVH 91 (379)
T ss_pred HHHHhhcCceEEeeCCCC-----CCHHHHH----------HHHHHHHHHhC--CHhhCCEEEEEeCCCCCCCCCHHHHHH
Confidence 678889999999998877 6778888 99999999998 89999999999888 677899999999
Q ss_pred HHcCCCCCcceecccch------------HHHhcCCCCeEEEEeecCCCC------CccccCCCccc-ccccccccc---
Q 043382 143 NHYKLRSNILSYNLGAL------------QSAQVQPNSYTLVVSTENITL------GLYTGNDRSIL-RTTAYFVVA--- 200 (329)
Q Consensus 143 ~~Lglr~~v~~~dl~g~------------~lL~a~~~~~aLVVs~E~~S~------~~~~Gd~~sal-l~~~~~~~~--- 200 (329)
++||+++++.++|+.++ +++++++.++||||++|..+. ...|||+++|+ |+... ++.
T Consensus 92 ~~Lgl~~~~~~~dv~~aC~gg~~aL~~A~~~i~s~~~~~aLVv~~D~a~~~~~~~~~~~~GdGA~A~Ll~~~~-~i~~~~ 170 (379)
T TIGR01835 92 GLLGLQPFCRSFELKQACYGATAALQMAKGHVALSPDRKVLVIASDIAKYGLESPGEPTQGAGAVAMLVSADP-KLLAIN 170 (379)
T ss_pred HHhCCCCCceEEEeccccHHHHHHHHHHHHHHHcCCCCeEEEEEeehhhcccCCCCCccccCccEEEEEecCC-CeeEEe
Confidence 99999888999999877 788889999999999999652 23799999987 55321 111
Q ss_pred -cceeec-ccCCCC-C--ccccc-----c-----------------------ccce-eeEeec----hHHHHHHHHhcc-
Q 043382 201 -GEALKT-HITALG-P--LVLPV-----S-----------------------EQLL-FIATSV----GRKIFKMKIKQY- 241 (329)
Q Consensus 201 -g~aL~~-di~~~G-p--~vlP~-----s-----------------------e~~~-~~~~~~----grkv~~~~v~~~- 241 (329)
+....+ +..... | ...|. + ++.. +.+|+. ..+.++...+.+
T Consensus 171 ~~~~~~t~~~~df~~p~~~~~~~v~g~~s~~~y~~~~~~~~~~~l~~~g~~~~did~~i~H~p~~~~~~k~~~~~l~~~~ 250 (379)
T TIGR01835 171 EDSVLYTDDIMDFWRPNYSTTALVDGQYSNEQYLNAFENAWNDYAKRTGLSLADFAAFCFHVPFTKMGLKALRHILKKNY 250 (379)
T ss_pred ccceeeecCCCCccCCCCCCceeECcHHHHHHHHHHHHHHHHHHHHHhCCCHHHcCEEEECCCCCcHHHHHHHHHHhhcc
Confidence 111222 211110 0 00110 0 0011 234432 122222222211
Q ss_pred ------------CccccccccCCCCcCcHHHHHHHHHHhC-CCCCCCEEEEEeechhhhhhheeeee
Q 043382 242 ------------PSRVTLYRFRNTSSSLVWYELAYAEAKR-RIPKGDRICQIGFGAGFNCNTVVWPV 295 (329)
Q Consensus 242 ------------~sr~tl~~~GNtsSaSi~~~La~~~~kg-rlk~GDrV~~iafGsGf~~~sav~r~ 295 (329)
++..+++++|||+|+|+++.|+.+++++ ++++||+|++++||+|+.......+.
T Consensus 251 ~~~~~~~~~~~~~s~~~~~~~GN~~sas~~l~L~~~l~~~~~~~~Gd~ill~s~GsG~~ae~~~~~~ 317 (379)
T TIGR01835 251 EDEDESVQNAYLESIIYNREVGNLYTGSLYLGLASLLENAFEDTTGDKIGLFSYGSGAVAEFFSGTL 317 (379)
T ss_pred cccHHHHHHHhhhhhhhhhhcCchHhHHHHHHHHHHHHhcccCCCCCEEEEEEecCCcceeeEEEEE
Confidence 1224688999999999999999999986 89999999999999996665555544
No 33
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=99.80 E-value=1.6e-19 Score=165.75 Aligned_cols=125 Identities=22% Similarity=0.246 Sum_probs=101.4
Q ss_pred hHHHHHHHHHHHcCCCceEeccCC-C---------CCCCCCchhHHHHHhhchHHHHHHHHHHHHhcCCCCCCcCEEEEe
Q 043382 58 NYVTVLLKLLERSRIGNMTYGPKS-L---------MDNPAENRHMKEAKKETDDVIIGAIDERLAKTGFKHKDIGILVVN 127 (329)
Q Consensus 58 ~~~~~~~~I~~~sGI~~R~~~~~~-~---------~~~pe~~~~ma~~~~ea~~l~~~Aa~~aL~kagv~p~dId~LVv~ 127 (329)
+..+.+.+|.+++||++||.+-+. . ...|.....|+.+.+++.+++.+|+++||+++|++++|||.||++
T Consensus 49 ~~~~~l~ri~~~sgI~~R~~vl~~~~~~~~p~~~~~~~ps~~~R~~~~~~~a~~L~~~Aa~~AL~~~g~~~~dIthlv~v 128 (226)
T PF00195_consen 49 DLRRKLRRIFENSGIEKRHSVLPEEWLDEYPSFWDFADPSLAERNALYAEEAPPLAEEAARKALAEAGLDPSDITHLVTV 128 (226)
T ss_dssp HHHHHHHHHHHHST-SEEEESS-HHHHHTSGGGHSSSSS-HHHHHHHHHHHHHHHHHHHHHHHHHHHTS-GGGECEEEEE
T ss_pred HHHHHHHhhhhccccceeccccchhhhhcCcchhhccCccHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccceEEEE
Confidence 667788999999999999988431 0 011112234678899999999999999999999999999999999
Q ss_pred ccCCCCCCchHHHHHHHcCCCCCcceecccch-------------HHHhcCCCCeEEEEeecCCCCCc
Q 043382 128 SSLFNPTPSLSAFIVNHYKLRSNILSYNLGAL-------------QSAQVQPNSYTLVVSTENITLGL 182 (329)
Q Consensus 128 ss~~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~-------------~lL~a~~~~~aLVVs~E~~S~~~ 182 (329)
|+|...+|++..+++++|||++++.++.|.+| ++.+++|..+||||++|.+|..|
T Consensus 129 s~TG~~~PglD~~l~~~LgL~~~v~R~~i~~~GC~gg~~~L~~A~~~~~~~p~a~VLvv~vElcsl~~ 196 (226)
T PF00195_consen 129 SCTGIAAPGLDARLINRLGLRPDVQRTPIFGMGCAGGAAGLRRAKDIARANPGARVLVVCVELCSLHF 196 (226)
T ss_dssp ESSSSECS-HHHHHHHHHT--TTSEEEEEES-GGGHHHHHHHHHHHHHHHSTT-EEEEEEEEEGGGTH
T ss_pred ecCCcCCCchhHHHHhcCCCCCCcEEEEEeccchhhHHHHHHHHHHHHhCCccceEEEEEEEeeEEEE
Confidence 99999999999999999999999999999998 78889999999999999999544
No 34
>PLN02577 hydroxymethylglutaryl-CoA synthase
Probab=99.79 E-value=2.4e-18 Score=172.86 Aligned_cols=113 Identities=18% Similarity=0.224 Sum_probs=96.0
Q ss_pred HHHHHHcCCCceEec--cCCCCCCCCCchhHHHHHhhchHHHHHHHHHHHHhcCCCCCCcCEEEEeccC-CCCCCchHHH
Q 043382 64 LKLLERSRIGNMTYG--PKSLMDNPAENRHMKEAKKETDDVIIGAIDERLAKTGFKHKDIGILVVNSSL-FNPTPSLSAF 140 (329)
Q Consensus 64 ~~I~~~sGI~~R~~~--~~~~~~~pe~~~~ma~~~~ea~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~-~~~~Ps~aa~ 140 (329)
+|+ ++||++|+++ +++ |+..+|+ +.|+++||+++|++|+|||+||++|++ +...|+.|+.
T Consensus 33 ~~~--~~GI~~r~~ava~~~-----Ed~~tmA----------~~AA~~aL~~agid~~~IdllivaTeT~~d~~ps~A~~ 95 (459)
T PLN02577 33 GKY--TIGLGQDCMAFCTDV-----EDVISMS----------LTVVKSLLEKYNIDPKQIGRLEVGSETVIDKSKSIKTF 95 (459)
T ss_pred HHH--hhccceeEeccCCCC-----CCHHHHH----------HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCchHHH
Confidence 454 6899999985 455 6888999 999999999999999999999999988 6889999999
Q ss_pred HH---HHcCCCCCcceecccch------------HHHhcCC--CCeEEEEeecCCCC--C---ccccCCCccc-ccc
Q 043382 141 IV---NHYKLRSNILSYNLGAL------------QSAQVQP--NSYTLVVSTENITL--G---LYTGNDRSIL-RTT 194 (329)
Q Consensus 141 I~---~~Lglr~~v~~~dl~g~------------~lL~a~~--~~~aLVVs~E~~S~--~---~~~Gd~~sal-l~~ 194 (329)
|+ ++||.+ ++.+||++++ ++++++. .++||||++|..+. + ..+||+++++ |+.
T Consensus 96 v~~ll~~LG~~-~~~afDi~~AC~G~~~AL~~A~~~i~sg~~~~~~aLVV~aD~a~~~~~~~e~t~GdGA~A~lv~~ 171 (459)
T PLN02577 96 LMQLFEESGNT-DIEGVDSTNACYGGTAALLNCVNWVESSSWDGRYGLVVAADSAVYAEGPARPTGGAGAVAMLVGP 171 (459)
T ss_pred HHHHHHHhCCC-CcEEeehhhhhHHHHHHHHHHHHHHHcCCCCCCeEEEEEechhhccCCCCCCCCCcceEEEEEcc
Confidence 96 788886 8999999987 7888875 59999999999662 2 2579999887 653
No 35
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=99.77 E-value=9.5e-18 Score=162.90 Aligned_cols=218 Identities=17% Similarity=0.179 Sum_probs=159.5
Q ss_pred HHHHHHcCCCceEeccCCCCCCCCCchhHHHHHhhchHHHHHHHHHHHHhcCCCCCCcCEEEEeccC-CCCCCchHHHHH
Q 043382 64 LKLLERSRIGNMTYGPKSLMDNPAENRHMKEAKKETDDVIIGAIDERLAKTGFKHKDIGILVVNSSL-FNPTPSLSAFIV 142 (329)
Q Consensus 64 ~~I~~~sGI~~R~~~~~~~~~~pe~~~~ma~~~~ea~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~-~~~~Ps~aa~I~ 142 (329)
+++.+-.|++++.+.+.+ |+..+|+ ++|++++|++.+++|++||.|+|+|.+ ++..-+.|.+|+
T Consensus 31 ~k~~~gl~~~e~sv~~~~-----ED~vTma----------veAA~~~l~r~~~D~~~Ig~v~vgTES~~d~~K~~at~v~ 95 (377)
T COG3425 31 EKIKKGLGVEEKSVPPWD-----EDAVTMA----------VEAARNALKRADIDPSKIGAVIVGSESGPDAVKPTATIVA 95 (377)
T ss_pred HHhhhccccccccCCCCc-----hhHHHHH----------HHHHHHHHhccCCCHHHCceEEEecCCCcccccchHHHHH
Confidence 678889999999999998 7999999 999999999999999999999999988 788999999999
Q ss_pred HHcCCCCCcceecccch------------HHHhcCCCCeEEEEeecCCC------CCccccCCCccc-ccc-cc--ccc-
Q 043382 143 NHYKLRSNILSYNLGAL------------QSAQVQPNSYTLVVSTENIT------LGLYTGNDRSIL-RTT-AY--FVV- 199 (329)
Q Consensus 143 ~~Lglr~~v~~~dl~g~------------~lL~a~~~~~aLVVs~E~~S------~~~~~Gd~~sal-l~~-~~--~~~- 199 (329)
+.||+.+++.++|+..+ +++.+++.+++|||++|+.- ..+-.|.++.|+ ++. +. ...
T Consensus 96 ~~lg~~~~~~~~d~~~AC~agT~aL~~a~~~v~s~~~~~~LvI~sD~a~~~~~~~~E~t~GAGavA~lIg~n~~~~a~~~ 175 (377)
T COG3425 96 EALGLNPSARAADVEFACYAGTAALQAAIGWVESGMISYGLVIGADTAQYAPGDALEYTAGAGAVAFLIGKNPPIVAEFE 175 (377)
T ss_pred HHhCCCCceehhhHHHHHHHHHHHHHHHHHHHHcCCccceEEEeehhhccCCCcccCccCCCceEEEEEccCCCeEEEec
Confidence 99999999999999988 78899999999999999864 235678888877 653 32 111
Q ss_pred ccceeecccCCCCC---ccccc-----ccc-----------------------c-eeeEeechHHHHHHHHhcc------
Q 043382 200 AGEALKTHITALGP---LVLPV-----SEQ-----------------------L-LFIATSVGRKIFKMKIKQY------ 241 (329)
Q Consensus 200 ~g~aL~~di~~~Gp---~vlP~-----se~-----------------------~-~~~~~~~grkv~~~~v~~~------ 241 (329)
......+|++.+.- ...|. +++ . .+.+|+--.|.-..+.+.+
T Consensus 176 ~~~syt~d~~DFwRp~~~~yp~~dg~~s~~~Y~~~~~~a~~~~~~k~gls~~dfdy~vfH~P~~k~~~ka~k~l~~~~e~ 255 (377)
T COG3425 176 GTGSYTTDTPDFWRPDGQPYPYVDGRFSEPAYFKHVENAAKGYMEKTGLSPDDFDYIVFHQPNGKFPKKAAKSLGFKEEQ 255 (377)
T ss_pred CceEEecCCCcccccCCCcccccCceecHHHHHHHHHHHHHHHHHHhCCChhhhCeEEecCCCCchHHHHHHHhCccHhh
Confidence 11223344433321 01221 110 0 0123333223222333322
Q ss_pred --CccccccccCCCCcCcHHHHHHHHHHhCCCCCCCEEEEEeechhhhhhheeeeeec
Q 043382 242 --PSRVTLYRFRNTSSSLVWYELAYAEAKRRIPKGDRICQIGFGAGFNCNTVVWPVLK 297 (329)
Q Consensus 242 --~sr~tl~~~GNtsSaSi~~~La~~~~kgrlk~GDrV~~iafGsGf~~~sav~r~~~ 297 (329)
++-.+-++.|||.|+|+++.|+.++++.+ ++||||++.+||||......-.....
T Consensus 256 v~~~l~~~~~vGN~YtgS~~L~Las~L~~a~-~~G~rIl~~SYGSGa~s~~fs~~v~~ 312 (377)
T COG3425 256 VKPGLVYPQRIGNTYTGSLLLGLASLLDNAK-LPGDRILLFSYGSGAGSEAFSITVTD 312 (377)
T ss_pred cCccchhhhhcCcccchhHHHHHHHHHhhcC-CCCCEEEEEeeCCCcceeEEEEEecc
Confidence 22245568999999999999999999876 79999999999999544444433333
No 36
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=99.75 E-value=7.4e-18 Score=154.85 Aligned_cols=189 Identities=14% Similarity=0.098 Sum_probs=135.4
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcCEEEEeccC-CCCCCchHHHHHHHcCCCCCcceecccch------------HHHhcCC
Q 043382 100 DDVIIGAIDERLAKTGFKHKDIGILVVNSSL-FNPTPSLSAFIVNHYKLRSNILSYNLGAL------------QSAQVQP 166 (329)
Q Consensus 100 ~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~-~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~------------~lL~a~~ 166 (329)
.+++.+|++++|+++|++++|||.||+++++ ++..|+.+.+|++++|++ +..++++.+. ++|+++.
T Consensus 8 ~~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~~-~~~~~~i~~~C~s~~~al~~A~~~i~~g~ 86 (254)
T cd00327 8 SELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGIS-GGPAYSVNQACATGLTALALAVQQVQNGK 86 (254)
T ss_pred HHHHHHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCCC-CCCcceeccHhHHHHHHHHHHHHHHHCCC
Confidence 4566999999999999999999999999887 566899999999999997 7889998876 7889999
Q ss_pred CCeEEEEeecCCCCCccccCCCccc-cccccc----------ccccceeecccCCCCCcccc---------------cc-
Q 043382 167 NSYTLVVSTENITLGLYTGNDRSIL-RTTAYF----------VVAGEALKTHITALGPLVLP---------------VS- 219 (329)
Q Consensus 167 ~~~aLVVs~E~~S~~~~~Gd~~sal-l~~~~~----------~~~g~aL~~di~~~Gp~vlP---------------~s- 219 (329)
.+++||+++|. ++|||+++++ |++.-. .+.+.....+-....+...+ .+
T Consensus 87 ~~~~lv~~~e~----~~~gdGAaa~vL~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ag~~~ 162 (254)
T cd00327 87 ADIVLAGGSEE----FVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDGASMVPAVSGEGLARAARKALEGAGLTP 162 (254)
T ss_pred CCEEEEEecce----eeecceEEEEEECcHHHHHHCCCceEEEEEEEEEcCCCCCCCCCCChHHHHHHHHHHHHHcCCCH
Confidence 99999999998 7899999988 664210 01111111110000000000 00
Q ss_pred ccce-eeEeechHHHHHHHHhcc----------CccccccccCCCCcCcHHHHHHHHHHhCCCC-------CCCEEEEEe
Q 043382 220 EQLL-FIATSVGRKIFKMKIKQY----------PSRVTLYRFRNTSSSLVWYELAYAEAKRRIP-------KGDRICQIG 281 (329)
Q Consensus 220 e~~~-~~~~~~grkv~~~~v~~~----------~sr~tl~~~GNtsSaSi~~~La~~~~kgrlk-------~GDrV~~ia 281 (329)
++.. +.+|..+....+...+.. +...+..+|||++++|.++.|++..++.+.+ +||++++.+
T Consensus 163 ~did~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 242 (254)
T cd00327 163 SDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATLIMTGHPLGAAGLAILDELLLMLEHEFIPPTPREPRTVLLLG 242 (254)
T ss_pred HHCCEEEccCCcCccccHHHHHHHHHHhCCCCCceeccccccccchHHHHHHHHHHHHHHHhCCCcCCCCCCcCEEEEee
Confidence 0111 223433433322221111 2246788999999999999999999887766 899999999
Q ss_pred echhhhhhheee
Q 043382 282 FGAGFNCNTVVW 293 (329)
Q Consensus 282 fGsGf~~~sav~ 293 (329)
||.|++++++++
T Consensus 243 ~g~Gg~~~~~~l 254 (254)
T cd00327 243 FGLGGTNAAVVL 254 (254)
T ss_pred EcCCCcceEEEC
Confidence 999999998874
No 37
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade. Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.
Probab=99.69 E-value=5.1e-16 Score=155.91 Aligned_cols=111 Identities=10% Similarity=0.185 Sum_probs=92.9
Q ss_pred HcCCCceEe--ccCCCCCCCCCchhHHHHHhhchHHHHHHHHHHHHhcCCCCCCcCEEEEeccC-CCCCCchHHHHHHHc
Q 043382 69 RSRIGNMTY--GPKSLMDNPAENRHMKEAKKETDDVIIGAIDERLAKTGFKHKDIGILVVNSSL-FNPTPSLSAFIVNHY 145 (329)
Q Consensus 69 ~sGI~~R~~--~~~~~~~~pe~~~~ma~~~~ea~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~-~~~~Ps~aa~I~~~L 145 (329)
.+||++|++ .+++ |+..+|+ ..|++++|++++++|++||+||++|.+ ++..|+.+++|++.|
T Consensus 33 ~~GI~~rr~av~~~~-----Ed~~tma----------~~AA~~lL~~a~id~~~Id~Liv~TeS~~d~sps~a~~v~~lL 97 (454)
T TIGR01833 33 TIGLGQTKMGFCTDR-----EDINSLC----------LTVVSKLMERYNIDYNQIGRLEVGTETIIDKSKSVKTVLMQLF 97 (454)
T ss_pred eechhheecccCCCC-----CCHHHHH----------HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCchHHHHHHHH
Confidence 699999995 4555 6888898 999999999999999999999999988 789999999999965
Q ss_pred CC--CCCcceecccch------------HHHhcCC--CCeEEEEeecCCCCC-----ccccCCCccc-ccc
Q 043382 146 KL--RSNILSYNLGAL------------QSAQVQP--NSYTLVVSTENITLG-----LYTGNDRSIL-RTT 194 (329)
Q Consensus 146 gl--r~~v~~~dl~g~------------~lL~a~~--~~~aLVVs~E~~S~~-----~~~Gd~~sal-l~~ 194 (329)
|+ ..++.+||++++ ++++++. .++||||++|+.-.+ ..+|+++.|+ |+.
T Consensus 98 ~~lG~~~~~~fDi~~AC~G~t~AL~~A~~~i~s~~~~~~~aLVV~sDia~y~~~~~~~t~GaGAvAmLv~~ 168 (454)
T TIGR01833 98 EESGNTDVEGIDTTNACYGGTAALFNAINWIESSSWDGRYALVVAGDIAVYAKGNARPTGGAGAVAMLIGP 168 (454)
T ss_pred HhcCCCCceEEeccccchhHHHHHHHHHHHHHcCCcCCCeEEEEEeccccccCCCeeeccccceEEEEecc
Confidence 43 238999999987 7888874 699999999994321 2679999877 653
No 38
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=99.57 E-value=9.1e-15 Score=139.58 Aligned_cols=191 Identities=19% Similarity=0.176 Sum_probs=128.9
Q ss_pred hHHHHHHHHHHHHhcCCC----CCCcCEEEEeccCC-CC---------------------CCchHHHHHHHcCCCCCcce
Q 043382 100 DDVIIGAIDERLAKTGFK----HKDIGILVVNSSLF-NP---------------------TPSLSAFIVNHYKLRSNILS 153 (329)
Q Consensus 100 ~~l~~~Aa~~aL~kagv~----p~dId~LVv~ss~~-~~---------------------~Ps~aa~I~~~Lglr~~v~~ 153 (329)
.+++.+|+++||+++|++ ++|||.||++|+.. .. .|+.+.+|++.||++ ..+
T Consensus 12 ~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--g~~ 89 (332)
T cd00825 12 SILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKAMFPGASGQIATPLGIH--GPA 89 (332)
T ss_pred HHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcchhhcccchHHHHHHHHHhCCC--CCc
Confidence 345599999999999999 99999999988763 33 799999999999995 566
Q ss_pred ecccch------------HHHhcCCCCeEEEEeecCCCC---------------------------CccccCCCccc-cc
Q 043382 154 YNLGAL------------QSAQVQPNSYTLVVSTENITL---------------------------GLYTGNDRSIL-RT 193 (329)
Q Consensus 154 ~dl~g~------------~lL~a~~~~~aLVVs~E~~S~---------------------------~~~~Gd~~sal-l~ 193 (329)
+++.+. ++|++++.+++||+++|..+. .+++||+++++ |+
T Consensus 90 ~~v~~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gdGaaA~vL~ 169 (332)
T cd00825 90 YDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFDAMGALSTPEKASRTFDAAADGFVFGDGAGALVVE 169 (332)
T ss_pred cccccHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHhhccccCCCCCCCCCCCCCCCEEEEeeEEEEEEC
Confidence 776655 789999999999999998752 12567888776 55
Q ss_pred cccc----------ccccceeecccCCCCCcccc-----------------cc-ccce-eeEeechHHHHHHHH----hc
Q 043382 194 TAYF----------VVAGEALKTHITALGPLVLP-----------------VS-EQLL-FIATSVGRKIFKMKI----KQ 240 (329)
Q Consensus 194 ~~~~----------~~~g~aL~~di~~~Gp~vlP-----------------~s-e~~~-~~~~~~grkv~~~~v----~~ 240 (329)
+.-. .+.+.....|-...+. ..+ .+ ++.. +..|..+++..+... .+
T Consensus 170 ~~~~a~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~i~~al~~agl~~~did~~~~h~~~~~~~~~~e~~~~~~ 248 (332)
T cd00825 170 ELEHALARGAHIYAEIVGTAATIDGAGMGA-FAPSAEGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRS 248 (332)
T ss_pred cHHHHHHCCCeEEEEEEEEEEccCCCCCCC-CCcCHHHHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCCCHHHHHHHHH
Confidence 3210 0111111111000000 000 00 0111 223333333221111 11
Q ss_pred -c-----CccccccccCCCCcCcHHHHHHHHHHhCCCC-------------------------CCCEEEEEeechhhhhh
Q 043382 241 -Y-----PSRVTLYRFRNTSSSLVWYELAYAEAKRRIP-------------------------KGDRICQIGFGAGFNCN 289 (329)
Q Consensus 241 -~-----~sr~tl~~~GNtsSaSi~~~La~~~~kgrlk-------------------------~GDrV~~iafGsGf~~~ 289 (329)
. +...+..+|||++++|.++.|+.+...++.+ +||++++++||.|.+++
T Consensus 249 ~~~~~~~~~~~~~~~~G~~~aas~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G~Gg~~~ 328 (332)
T cd00825 249 EFGDKSPAVSATKAMTGNLSSAAVVLAVDEAVLMLEHGFIPPSIHIEELDEAGLNIVTETTPRELRTALLNGFGLGGTNA 328 (332)
T ss_pred HhCCCCceeECCCcccccchhHhHHHHHHHHHHHHhcCccCCCCCCCCCCcccCcccCCCCCCCCCEEEEeeecCCCeeE
Confidence 1 2226788999999999999999999877666 89999999999999999
Q ss_pred heee
Q 043382 290 TVVW 293 (329)
Q Consensus 290 sav~ 293 (329)
++++
T Consensus 329 ~~vl 332 (332)
T cd00825 329 TLVL 332 (332)
T ss_pred EEeC
Confidence 8874
No 39
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=99.46 E-value=7.3e-14 Score=110.13 Aligned_cols=73 Identities=36% Similarity=0.510 Sum_probs=60.9
Q ss_pred eeeEeechHHHHHHHHhcc---Ccc--ccccccCCCCcCcHHHHHHHHHHhCCCCCCCEEEEEeechhhhhhheeeee
Q 043382 223 LFIATSVGRKIFKMKIKQY---PSR--VTLYRFRNTSSSLVWYELAYAEAKRRIPKGDRICQIGFGAGFNCNTVVWPV 295 (329)
Q Consensus 223 ~~~~~~~grkv~~~~v~~~---~sr--~tl~~~GNtsSaSi~~~La~~~~kgrlk~GDrV~~iafGsGf~~~sav~r~ 295 (329)
.+..|...+++++...+.+ ++| .++++||||+|+|+|+.|+++.++|++++||+|+++++|+|++|+++++||
T Consensus 13 ~~i~hq~~~~~~~~~~~~lgi~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~Gd~vl~~~~G~G~~~~~~~~~~ 90 (90)
T PF08541_consen 13 HFIPHQASKKILDSIAKRLGIPPERFPDNLAEYGNTGSASIPINLADALEEGRIKPGDRVLLVGFGAGFSWGAAVLRW 90 (90)
T ss_dssp EEEE-SSSHHHHHHHHHHHTS-GGGBE-THHHH-B-GGGHHHHHHHHHHHTTSSCTTEEEEEEEEETTTEEEEEEEE-
T ss_pred EEEeCCCCHHHHHHHHHHcCCcHHHHHHHHhccCcchhhhHHHHHHHHHHcCCCCCCCEEEEEEEEhhheeEEEEEEC
Confidence 4567788888888766665 455 678999999999999999999999999999999999999999999999997
No 40
>PF02797 Chal_sti_synt_C: Chalcone and stilbene synthases, C-terminal domain; InterPro: IPR012328 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyze the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group []. This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain. ; GO: 0016746 transferase activity, transferring acyl groups; PDB: 3OV2_A 3OV3_B 1Z1F_A 1Z1E_A 3ALE_C 3OIT_A 2H84_A 1TEE_D 1TED_A 2P0U_A ....
Probab=99.31 E-value=1.5e-12 Score=113.08 Aligned_cols=74 Identities=23% Similarity=0.357 Sum_probs=60.8
Q ss_pred eeeEeechHHHHHHHHhcc--------CccccccccCCCCcCcHHHHHHHHHH----hCCCCC---CCEEEEEeechhhh
Q 043382 223 LFIATSVGRKIFKMKIKQY--------PSRVTLYRFRNTSSSLVWYELAYAEA----KRRIPK---GDRICQIGFGAGFN 287 (329)
Q Consensus 223 ~~~~~~~grkv~~~~v~~~--------~sr~tl~~~GNtsSaSi~~~La~~~~----kgrlk~---GDrV~~iafGsGf~ 287 (329)
.+.+|..|++|++...+.+ +||.+|++||||||+|++++|+++.+ +|.... +++++++|||+||+
T Consensus 62 ~wavHPGG~~ILd~v~~~L~L~~~~l~~Sr~vLr~yGNmSSaTVlfVL~~~~~~~~~~g~~~~~~g~~~gv~~afGPG~t 141 (151)
T PF02797_consen 62 FWAVHPGGRKILDAVEEALGLSPEQLRASREVLREYGNMSSATVLFVLERMRRKSAEEGAPPPGEGGEWGVMLAFGPGLT 141 (151)
T ss_dssp EEEEE-SSHHHHHHHHHHHTS-GGGGHHHHHHHHHH-B-GGGHHHHHHHHHHHHHHHTTTSBTTTTBSEEEEEEEETTTE
T ss_pred eeeecCChHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCcchHHHHHHHHhhhhhhcccCCCCCCCeEEEEEECCcce
Confidence 4678999999999887766 67799999999999999999999988 344332 48999999999999
Q ss_pred hhheeeeee
Q 043382 288 CNTVVWPVL 296 (329)
Q Consensus 288 ~~sav~r~~ 296 (329)
+.++++|..
T Consensus 142 ~E~~lLr~~ 150 (151)
T PF02797_consen 142 IEGMLLRSV 150 (151)
T ss_dssp EEEEEEEE-
T ss_pred EeeEEEeeC
Confidence 999999863
No 41
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=98.93 E-value=5.7e-09 Score=100.37 Aligned_cols=89 Identities=11% Similarity=0.132 Sum_probs=74.2
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCcceecccch------------HHHhcCCC
Q 043382 100 DDVIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSYNLGAL------------QSAQVQPN 167 (329)
Q Consensus 100 ~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~------------~lL~a~~~ 167 (329)
.+|+.+|+++||+++|++++|||.+|+++... .|..++.++++||++ .||++++ .+++++..
T Consensus 51 ~eLa~eAa~~ALekAGL~~~DID~IIvGdl~~--Q~~~As~vA~~LGIP----~fdV~~ACSTf~~AL~lAa~lI~SG~a 124 (327)
T TIGR02845 51 RKLMEDAVNLALKKANLKKDDVDFFLAGDLLN--QIITANFVARDLGIP----FLGLYGACSTSMETLALGAMLVDGGFA 124 (327)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEeCCCC--cccHHHHHHHHhCCC----EEEEeccCHHHHHHHHHHHHHHhCCCC
Confidence 46779999999999999999999999987433 455788999999974 4888876 78899999
Q ss_pred CeEEEEeecCCC--------C-Cc---------cccCCCccc-ccc
Q 043382 168 SYTLVVSTENIT--------L-GL---------YTGNDRSIL-RTT 194 (329)
Q Consensus 168 ~~aLVVs~E~~S--------~-~~---------~~Gd~~sal-l~~ 194 (329)
++||||++|..| + +| +|||+++++ |+.
T Consensus 125 d~VLVV~Ssh~S~AErqfr~p~eyg~q~~~ta~~tgdGAGA~vl~~ 170 (327)
T TIGR02845 125 DRVLAATSSHYATAERQFRYPTEYGVQKPPTAQWTVTGAGAVLLAS 170 (327)
T ss_pred CEEEEEEecccchhhhhcccccccccCCCCeeeEEEcccEEEEEee
Confidence 999999988877 1 33 799999987 654
No 42
>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A ....
Probab=98.86 E-value=2.5e-09 Score=94.58 Aligned_cols=100 Identities=17% Similarity=0.195 Sum_probs=76.6
Q ss_pred HHHHHcCCCceEeccCCCCCCCCCchhHHHHHhhchHHHHHHHHHHHHhcCCCCCCcCEEEEeccC-CCCCCchHHHHHH
Q 043382 65 KLLERSRIGNMTYGPKSLMDNPAENRHMKEAKKETDDVIIGAIDERLAKTGFKHKDIGILVVNSSL-FNPTPSLSAFIVN 143 (329)
Q Consensus 65 ~I~~~sGI~~R~~~~~~~~~~pe~~~~ma~~~~ea~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~-~~~~Ps~aa~I~~ 143 (329)
|+..-.|.++..+.++. |+..+|+ ..|++++|++.+++|++|+.|+|.|.+ ....-|.+.+|++
T Consensus 34 K~~~glgq~~~av~~~~-----ED~vTmA----------~nAa~~ll~~~~id~~~Ig~l~vgTES~vD~sKs~~t~v~~ 98 (174)
T PF01154_consen 34 KYTIGLGQEKMAVPPPD-----EDIVTMA----------ANAAKPLLDRYNIDPDDIGRLIVGTESGVDKSKSISTYVHQ 98 (174)
T ss_dssp HHHTTT--SEEEE--TT-----S-HHHHH----------HHHHHTTHHHHT-HHHHEEEEEEE-SS-SBSSS-HHHHHHH
T ss_pred HhhhhcCeeEEEeCCCc-----ccHHHHH----------HHHHHHHHHHcCCCHHHccEEEEeccccccccccHHHHHHH
Confidence 44444455556666777 7888999 999999999999999999999999987 5678889999999
Q ss_pred HcCC--CCCcceecccch------------HHHhcC--CCCeEEEEeecCCC
Q 043382 144 HYKL--RSNILSYNLGAL------------QSAQVQ--PNSYTLVVSTENIT 179 (329)
Q Consensus 144 ~Lgl--r~~v~~~dl~g~------------~lL~a~--~~~~aLVVs~E~~S 179 (329)
.||+ ..+|..+|+.++ ++++++ +++++|||++|+-.
T Consensus 99 ll~~s~~~~~~~~e~k~ACygGTaAL~~a~~~v~s~~~~g~~aLVVasDiA~ 150 (174)
T PF01154_consen 99 LLGLSGNPDCRGVEMKQACYGGTAALQNAVNWVASSPWDGRKALVVASDIAR 150 (174)
T ss_dssp HTTTTT-SSSEEEEEESGGGHHHHHHHHHHHHHCSTTSTTEEEEEEEEEEE-
T ss_pred HhCcCCCCceeeeehhhhhHHHHHHHHHHHHHHhcCCCCCCeEEEEeccccc
Confidence 9999 447889999988 788886 47899999999865
No 43
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=98.81 E-value=1.5e-08 Score=99.08 Aligned_cols=217 Identities=12% Similarity=0.014 Sum_probs=134.9
Q ss_pred HHHHHHcCCCceEeccCCCCCCCCCchhHHHHHhhchHHHHHHHHHHHHhcC-CCCCCcCEEEEecc------CCCCCCc
Q 043382 64 LKLLERSRIGNMTYGPKSLMDNPAENRHMKEAKKETDDVIIGAIDERLAKTG-FKHKDIGILVVNSS------LFNPTPS 136 (329)
Q Consensus 64 ~~I~~~sGI~~R~~~~~~~~~~pe~~~~ma~~~~ea~~l~~~Aa~~aL~kag-v~p~dId~LVv~ss------~~~~~Ps 136 (329)
+||..++|+.+|++.. . +... +|+..|++++|++++ +++++||++|+.++ .+...|.
T Consensus 46 ~~i~~~~~~~~~~~~~-~-----~r~~----------~La~~Al~~aL~~a~~~~~~~i~lil~~~~~~~~~~~~~~~~~ 109 (348)
T PRK06147 46 EWLIGAPVPLPPPWRG-P-----ERLA----------EMAAPAIAEALEGLPALDASEAPLLLCVAEEERPGRPPDLEER 109 (348)
T ss_pred CceEeecCcCCcccCc-h-----HHHH----------HHHHHHHHHHHHhcccccccCCcEEEEeCchhcCCCCcchHHH
Confidence 5677777776666532 1 2333 455999999999999 89999999998754 2344556
Q ss_pred hHHHHHHHcCCCCCcceecccch------------HHHhcCCCCeEEEEeecCCCC--------------------Cccc
Q 043382 137 LSAFIVNHYKLRSNILSYNLGAL------------QSAQVQPNSYTLVVSTENITL--------------------GLYT 184 (329)
Q Consensus 137 ~aa~I~~~Lglr~~v~~~dl~g~------------~lL~a~~~~~aLVVs~E~~S~--------------------~~~~ 184 (329)
++..+++++|++....++++++. ++|+.+..+.+||+++|.++. -+++
T Consensus 110 ~~~~~~~~lG~~~~~~~~~i~~~casg~~Al~~A~~~i~~G~~~~~lvgg~d~~~~~~~~~~~~~~~~l~~~~~~~G~v~ 189 (348)
T PRK06147 110 LLRELEARLGLRLEPGSAVIARGRVSGAVALAQARRLIAAGGCPRVLVAGVDSLLTGPTLAHYEARDRLLTSQNSNGFIP 189 (348)
T ss_pred HHHHHHHHhCCCCCCCcccccccchHHHHHHHHHHHHHHcCCCCEEEEEeeccccCHHHHHHHHHhhccCCCCCCCceee
Confidence 78899999999655678888875 789999999999999998642 1378
Q ss_pred cCCCccc-ccccc----cc--cccceeecccCCC-CCccccc-c------------------cccee-eEeechHHHHH-
Q 043382 185 GNDRSIL-RTTAY----FV--VAGEALKTHITAL-GPLVLPV-S------------------EQLLF-IATSVGRKIFK- 235 (329)
Q Consensus 185 Gd~~sal-l~~~~----~~--~~g~aL~~di~~~-Gp~vlP~-s------------------e~~~~-~~~~~grkv~~- 235 (329)
|++++++ |+..- .+ +.+.....+-... ...-.|. . ++..+ ..|..|...-+
T Consensus 190 GEGA~a~vLe~~~~A~~rga~i~a~g~~~~~~~~~~~~~~p~~g~gl~~ai~~AL~~agl~~~dId~v~ah~~gt~~~d~ 269 (348)
T PRK06147 190 GEAAAAVLLGRPAGGEAPGLPLLGLGLGREPAPVGESEDLPLRGDGLTQAIRAALAEAGCGLEDMDYRIADLNGEQYRFK 269 (348)
T ss_pred eceEEEEEEccHhhhhcCCCceEEEEEeecCCCcccCCCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEcCCCCCccchH
Confidence 8888877 55311 00 1111111110000 0000111 0 11222 22333322211
Q ss_pred ---HHHhc-c-------CccccccccCCCCcCcHHHHHHHHHHh--CCCCCCCEEEEEeechhhhhhheeeeee
Q 043382 236 ---MKIKQ-Y-------PSRVTLYRFRNTSSSLVWYELAYAEAK--RRIPKGDRICQIGFGAGFNCNTVVWPVL 296 (329)
Q Consensus 236 ---~~v~~-~-------~sr~tl~~~GNtsSaSi~~~La~~~~k--grlk~GDrV~~iafGsGf~~~sav~r~~ 296 (329)
.+++. + +-..+-..+|++++++-.+++...... ...-+|+++++.+-.-.=..++++++..
T Consensus 270 ~e~~A~~~~f~~~~~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~~~~~g~~~g~~~L~~s~~d~g~r~a~~l~~~ 343 (348)
T PRK06147 270 EAALAEMRLFRVRKEFFDLWHPAECIGEIGAAIGPALLGVALAASRKGYGPGPNVLCHLSDDDGARAALVLEYR 343 (348)
T ss_pred HHHHHHHHHhhhccCCCceecchHhhcchHHHHHHHHHHHHHHHHHcCcCCCCcEEEEecCCCCceEEEEEecc
Confidence 11111 1 111345689999999999998865532 3456799999888877777888888853
No 44
>PRK08304 stage V sporulation protein AD; Validated
Probab=98.78 E-value=3.1e-08 Score=95.59 Aligned_cols=89 Identities=15% Similarity=0.125 Sum_probs=72.9
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCcceecccch------------HHHhcCCC
Q 043382 100 DDVIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSYNLGAL------------QSAQVQPN 167 (329)
Q Consensus 100 ~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~------------~lL~a~~~ 167 (329)
.+|+.+|+++||+++|++++|||.+|+++... .|..++.++++||+ +.+++.++ .+++++..
T Consensus 57 seLa~eAa~~ALekAGI~~~DID~lI~Gdll~--Q~~sAs~vA~~LGI----Pa~dV~gACST~~~AL~lAa~lI~SG~a 130 (337)
T PRK08304 57 RKMMEDAIQQALQKANLKKSDIDYLLAGDLLN--QIISANFAARELGI----PFLGLYGACSTMMESLALGSMLIDGGFA 130 (337)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEECCCC--CcchHHHHHHHhCC----cEEEEeccCHHHHHHHHHHHHHHhcCCC
Confidence 36779999999999999999999999997543 34678899999997 47888876 77889999
Q ss_pred CeEEEEeecCCCC---C---------------ccccCCCccc-ccc
Q 043382 168 SYTLVVSTENITL---G---------------LYTGNDRSIL-RTT 194 (329)
Q Consensus 168 ~~aLVVs~E~~S~---~---------------~~~Gd~~sal-l~~ 194 (329)
++||||++|..|. . ++++++++++ |..
T Consensus 131 d~VLVV~Ssh~s~aerqfr~P~eyg~qrp~taqwtvtGAGA~i~~~ 176 (337)
T PRK08304 131 DRVLAATSSHFATAERQFRFPTEYGGQRPPTAQWTVTGAGAVLLSR 176 (337)
T ss_pred CEEEEEEcchhhhhhhhccCchhccccCCCcceEEeeccEEEEEec
Confidence 9999999999872 1 2677888776 443
No 45
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=98.76 E-value=2.1e-08 Score=99.17 Aligned_cols=80 Identities=11% Similarity=0.137 Sum_probs=68.9
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCEEEEeccC-CCCCCchHHHHHHHcCCCCCcceecccch------------HHHhcCCC
Q 043382 101 DVIIGAIDERLAKTGFKHKDIGILVVNSSL-FNPTPSLSAFIVNHYKLRSNILSYNLGAL------------QSAQVQPN 167 (329)
Q Consensus 101 ~l~~~Aa~~aL~kagv~p~dId~LVv~ss~-~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~------------~lL~a~~~ 167 (329)
+|+.+|+++||+++|++++|||.+|++|++ +...|..+..+++++|++.++.+++++.. .++++|..
T Consensus 24 ~La~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~~~~~a~~v~~~lGl~~~~~~~~v~~~c~s~~~al~~A~~~I~sG~~ 103 (386)
T cd00751 24 DLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGLPESVPATTVNRVCGSGLQAVALAAQSIAAGEA 103 (386)
T ss_pred HHHHHHHHHHHHhcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCchhhhccccHHHHHHHHHHHHHHHCCCC
Confidence 444999999999999999999999998765 45578888889999999855788888765 78899999
Q ss_pred CeEEEEeecCCCC
Q 043382 168 SYTLVVSTENITL 180 (329)
Q Consensus 168 ~~aLVVs~E~~S~ 180 (329)
+++||+++|.+|.
T Consensus 104 ~~vLv~g~e~~s~ 116 (386)
T cd00751 104 DVVVAGGVESMSR 116 (386)
T ss_pred CeEEEeeeecccc
Confidence 9999999999874
No 46
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=98.63 E-value=8.3e-08 Score=95.02 Aligned_cols=81 Identities=12% Similarity=0.138 Sum_probs=69.4
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcCEEEEeccC-CCCCCchHHHHHHHcCCCCCcceecccch------------HHHhcCC
Q 043382 100 DDVIIGAIDERLAKTGFKHKDIGILVVNSSL-FNPTPSLSAFIVNHYKLRSNILSYNLGAL------------QSAQVQP 166 (329)
Q Consensus 100 ~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~-~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~------------~lL~a~~ 166 (329)
.+|+.+|+++||+++|++++|||.+|+.+.+ ....|..+..++.++|++.++.+++++.. +++++|.
T Consensus 22 ~~La~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~ 101 (386)
T TIGR01930 22 EDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNIARQAALLAGLPESVPAYTVNRQCASGLQAVILAAQLIRAGE 101 (386)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCceeeeecchhhHHHHHHHHHHHHHHCCC
Confidence 3444999999999999999999999998765 45457788899999999856888998765 7889999
Q ss_pred CCeEEEEeecCCCC
Q 043382 167 NSYTLVVSTENITL 180 (329)
Q Consensus 167 ~~~aLVVs~E~~S~ 180 (329)
.+++||+++|..|.
T Consensus 102 ~~~vLv~g~e~~s~ 115 (386)
T TIGR01930 102 ADVVVAGGVESMSR 115 (386)
T ss_pred CCEEEEEEehhhcc
Confidence 99999999999874
No 47
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=98.61 E-value=1.2e-07 Score=94.21 Aligned_cols=80 Identities=8% Similarity=0.071 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCEEEEeccC-CCCCCc-hHHHHHHHcCCCCCcceecccch------------HHHhcCC
Q 043382 101 DVIIGAIDERLAKTGFKHKDIGILVVNSSL-FNPTPS-LSAFIVNHYKLRSNILSYNLGAL------------QSAQVQP 166 (329)
Q Consensus 101 ~l~~~Aa~~aL~kagv~p~dId~LVv~ss~-~~~~Ps-~aa~I~~~Lglr~~v~~~dl~g~------------~lL~a~~ 166 (329)
+|+.+|++++|+++|++|+|||.+|+.+.. +...|+ .+..++.++|++.++++++++.. .+|++|.
T Consensus 29 dL~~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl~~~~p~~~V~~aCaSg~~Al~~A~~~I~sG~ 108 (392)
T PRK07108 29 TLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGLPVTVPGMTVNRFCSSGLQTIALAAQRVIAGE 108 (392)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCCCCCCceeeecchhhHHHHHHHHHHHHHHCCC
Confidence 444999999999999999999999998776 555555 88899999999877999999876 7899999
Q ss_pred CCeEEEEeecCCCC
Q 043382 167 NSYTLVVSTENITL 180 (329)
Q Consensus 167 ~~~aLVVs~E~~S~ 180 (329)
.+.+|+++.|.+|.
T Consensus 109 ~d~vlagGvE~ms~ 122 (392)
T PRK07108 109 GDVFVAGGVESISC 122 (392)
T ss_pred CCEEEEEEEeccCC
Confidence 99999999999984
No 48
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=98.55 E-value=2e-07 Score=92.55 Aligned_cols=81 Identities=14% Similarity=0.174 Sum_probs=70.0
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcCEEEEeccC-CCCCCchHHHHHHHcCCCCCcceecccch------------HHHhcCC
Q 043382 100 DDVIIGAIDERLAKTGFKHKDIGILVVNSSL-FNPTPSLSAFIVNHYKLRSNILSYNLGAL------------QSAQVQP 166 (329)
Q Consensus 100 ~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~-~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~------------~lL~a~~ 166 (329)
.+|+.+|++++|+++|++|+|||.+|++|+. ....|..+..++.++|++..+.+++++.. +++++|.
T Consensus 27 ~~La~~A~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~a~~va~~lGl~~~~p~~~V~~~Casg~~ai~~A~~~I~sG~ 106 (393)
T PRK05656 27 VELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGAGQNPARQAAIKAGLPHSVPAMTLNKVCGSGLKALHLAAQAIRCGD 106 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCCCCCcHHHHHHHHcCCCCCcceEEecccchhHHHHHHHHHHHHHcCC
Confidence 4455999999999999999999999999876 33467778889999999855889998876 7889999
Q ss_pred CCeEEEEeecCCCC
Q 043382 167 NSYTLVVSTENITL 180 (329)
Q Consensus 167 ~~~aLVVs~E~~S~ 180 (329)
.+++||+++|.+|.
T Consensus 107 ~d~vLv~G~E~ms~ 120 (393)
T PRK05656 107 AEVIIAGGQENMSL 120 (393)
T ss_pred CCEEEEEEEhhhcc
Confidence 99999999999985
No 49
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=98.54 E-value=1.9e-07 Score=93.09 Aligned_cols=81 Identities=11% Similarity=0.167 Sum_probs=71.0
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcCEEEEeccC-CCCCCchHHHHHHHcCCCCCcceecccch------------HHHhcCC
Q 043382 100 DDVIIGAIDERLAKTGFKHKDIGILVVNSSL-FNPTPSLSAFIVNHYKLRSNILSYNLGAL------------QSAQVQP 166 (329)
Q Consensus 100 ~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~-~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~------------~lL~a~~ 166 (329)
.+|+.+|++++|+++|++|+|||.+|+.|++ ....|..+..++.++|++.++.+++++.. +++++|.
T Consensus 27 ~eLa~~A~~~AL~~agl~~~dID~vv~g~~~~~~~~~~~a~~va~~~Gl~~~~p~~~V~~~CaSg~~Al~~A~~~I~sG~ 106 (404)
T PRK06205 27 EELAATVIRALVERTGIDPARIDDVIFGQGYPNGEAPAIGRVAALDAGLPVTVPGMQLDRRCGSGLQAVITAAMQVQTGA 106 (404)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCceeehhhhhhHHHHHHHHHHHHHHcCC
Confidence 4555999999999999999999999999876 56678888899999999866888888765 7899999
Q ss_pred CCeEEEEeecCCCC
Q 043382 167 NSYTLVVSTENITL 180 (329)
Q Consensus 167 ~~~aLVVs~E~~S~ 180 (329)
.+.+||++.|.+|.
T Consensus 107 ~d~vLv~G~E~ms~ 120 (404)
T PRK06205 107 ADVVIAGGAESMSN 120 (404)
T ss_pred CCEEEEeeehhhcc
Confidence 99999999999883
No 50
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=98.50 E-value=3.4e-07 Score=90.98 Aligned_cols=81 Identities=12% Similarity=0.083 Sum_probs=67.9
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcCEEEEeccCC-CCCCchHHHHHHHcCCCCCcceecccch------------HHHhcCC
Q 043382 100 DDVIIGAIDERLAKTGFKHKDIGILVVNSSLF-NPTPSLSAFIVNHYKLRSNILSYNLGAL------------QSAQVQP 166 (329)
Q Consensus 100 ~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~-~~~Ps~aa~I~~~Lglr~~v~~~dl~g~------------~lL~a~~ 166 (329)
++|+.+|++++|+++|++|+|||.+|++|.+. ...+..+..++..+|++.++++++++.. ++|++|.
T Consensus 27 ~eLa~~A~~~aL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~V~~~CaSg~~Al~~A~~~I~sG~ 106 (393)
T PRK08235 27 TELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIPSRQAARAAGIPWEVQTETVNKVCASGLRAVTLADQIIRAGD 106 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCCHHHHHHHHcCCCCCcceeehhhhhhHHHHHHHHHHHHHHCCC
Confidence 45559999999999999999999999998752 1244555578999999767999998865 7899999
Q ss_pred CCeEEEEeecCCCC
Q 043382 167 NSYTLVVSTENITL 180 (329)
Q Consensus 167 ~~~aLVVs~E~~S~ 180 (329)
.+.+||+++|.+|.
T Consensus 107 ~d~vLvvG~E~ms~ 120 (393)
T PRK08235 107 ASVIVAGGMESMSN 120 (393)
T ss_pred CCEEEEEeeecccc
Confidence 99999999999884
No 51
>PRK06059 lipid-transfer protein; Provisional
Probab=98.49 E-value=3.7e-07 Score=90.74 Aligned_cols=80 Identities=15% Similarity=0.080 Sum_probs=68.3
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcCEEEEeccC--CCCCCchHHHHHHHcCCCCCcceecccch------------HHHhcC
Q 043382 100 DDVIIGAIDERLAKTGFKHKDIGILVVNSSL--FNPTPSLSAFIVNHYKLRSNILSYNLGAL------------QSAQVQ 165 (329)
Q Consensus 100 ~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~--~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~------------~lL~a~ 165 (329)
.+++.+|+++||+++|++++|||.||++++. .+..|..+..|++++|++ ++..+++++. ++|+++
T Consensus 24 ~~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~~-~~~~~~v~~~Casg~~al~~A~~~I~sG 102 (399)
T PRK06059 24 VEYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGWN-GAPVSSSYAACASGSQALQSARAQILAG 102 (399)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCCC-CCceecccchhHHHHHHHHHHHHHHHCC
Confidence 4566999999999999999999999988665 244456778999999997 5788888775 788999
Q ss_pred CCCeEEEEeecCCCC
Q 043382 166 PNSYTLVVSTENITL 180 (329)
Q Consensus 166 ~~~~aLVVs~E~~S~ 180 (329)
..+++||+++|..|.
T Consensus 103 ~~~~vLvvg~e~~s~ 117 (399)
T PRK06059 103 LCDVALVVGADTTPK 117 (399)
T ss_pred CCCEEEEEEEcccCC
Confidence 999999999999874
No 52
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=98.47 E-value=4.6e-07 Score=90.28 Aligned_cols=81 Identities=15% Similarity=0.173 Sum_probs=67.5
Q ss_pred hHHHHHHHHHHHHhc-CCCCCCcCEEEEeccC-CCCCCchHHHHHHH-cCCCCCcceecccch------------HHHhc
Q 043382 100 DDVIIGAIDERLAKT-GFKHKDIGILVVNSSL-FNPTPSLSAFIVNH-YKLRSNILSYNLGAL------------QSAQV 164 (329)
Q Consensus 100 ~~l~~~Aa~~aL~ka-gv~p~dId~LVv~ss~-~~~~Ps~aa~I~~~-Lglr~~v~~~dl~g~------------~lL~a 164 (329)
.+|+.+|++++|+++ |++|+|||.+|++|++ +...|...+.++.. +|++..+++++++.. +++++
T Consensus 32 ~eLa~~A~~~AL~~a~gl~~~dID~vi~g~~~~~~~~~~~~ar~~~~~~Gl~~~~p~~~V~~aCaSg~~Al~~A~~~I~s 111 (399)
T PRK09052 32 DDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLAGLPNSVGGVTVNRFCASGLQAVAMAADRIRV 111 (399)
T ss_pred HHHHHHHHHHHHHhccCcCHHHCCEEEEEecCCCCCCCchHHHHHHHHcCCCCCCceeeecchhhHHHHHHHHHHHHHHC
Confidence 556699999999997 9999999999999776 55556677775555 499755889998876 78999
Q ss_pred CCCCeEEEEeecCCCC
Q 043382 165 QPNSYTLVVSTENITL 180 (329)
Q Consensus 165 ~~~~~aLVVs~E~~S~ 180 (329)
|..+.+||++.|.+|.
T Consensus 112 G~~d~vLv~G~E~mS~ 127 (399)
T PRK09052 112 GEADVMIAAGVESMSM 127 (399)
T ss_pred CCCCEEEEEEEecccc
Confidence 9999999999999884
No 53
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=98.44 E-value=4.7e-07 Score=89.72 Aligned_cols=79 Identities=19% Similarity=0.121 Sum_probs=63.4
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCC--CCchHHHHHHHcCCCCCcceecccch------------HHHhcCC
Q 043382 101 DVIIGAIDERLAKTGFKHKDIGILVVNSSLFNP--TPSLSAFIVNHYKLRSNILSYNLGAL------------QSAQVQP 166 (329)
Q Consensus 101 ~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~--~Ps~aa~I~~~Lglr~~v~~~dl~g~------------~lL~a~~ 166 (329)
+|+.+|+++||+++|++++|||.+|++++.+.. .+..+..|+++||++ +..++++++. .+|++|.
T Consensus 26 eL~~eAa~~Al~dAgl~~~dID~iv~~~~~~~~~~~~~~~~~va~~LGl~-~~~~~~v~~~casg~~al~~A~~~I~sG~ 104 (386)
T PRK08313 26 GLVREAIDRALADAGLTWDDIDAVVVGKAPDFFEGVMMPELFLADALGAT-GKPLIRVHTAGSVGGSTAVVAASLVQSGV 104 (386)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEeccccccccccCchHHHHHhcCCC-CCceEEEeccCHHHHHHHHHHHHHHHCCC
Confidence 455999999999999999999999988743321 122336899999997 6788888543 7889999
Q ss_pred CCeEEEEeecCCCC
Q 043382 167 NSYTLVVSTENITL 180 (329)
Q Consensus 167 ~~~aLVVs~E~~S~ 180 (329)
.++||||++|..+.
T Consensus 105 ~~~vLVvg~e~~s~ 118 (386)
T PRK08313 105 YRRVLAVAWEKQSE 118 (386)
T ss_pred CCEEEEEEEEEccC
Confidence 99999999998763
No 54
>PRK09051 beta-ketothiolase; Provisional
Probab=98.43 E-value=6.4e-07 Score=89.09 Aligned_cols=81 Identities=17% Similarity=0.253 Sum_probs=67.0
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcCEEEEeccC-CCCCC-chHHHHHHHcCCCCCcceecccch------------HHHhcC
Q 043382 100 DDVIIGAIDERLAKTGFKHKDIGILVVNSSL-FNPTP-SLSAFIVNHYKLRSNILSYNLGAL------------QSAQVQ 165 (329)
Q Consensus 100 ~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~-~~~~P-s~aa~I~~~Lglr~~v~~~dl~g~------------~lL~a~ 165 (329)
.+|+.+|++++|+++|++|+|||.+|++|++ +...| ..+..+...+|++.++.+++++.. +++++|
T Consensus 28 ~eL~~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~V~~aCaSg~~Al~~A~~~I~sG 107 (394)
T PRK09051 28 TDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQETPAFNVNRLCGSGLQAIVSAAQAILLG 107 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCCCCCCceEEecccchHHHHHHHHHHHHHHcC
Confidence 4455999999999999999999999999877 44443 455556677899766888998775 788999
Q ss_pred CCCeEEEEeecCCCC
Q 043382 166 PNSYTLVVSTENITL 180 (329)
Q Consensus 166 ~~~~aLVVs~E~~S~ 180 (329)
..+++||+++|.+|.
T Consensus 108 ~~d~vLvvG~E~mS~ 122 (394)
T PRK09051 108 DADVAIGGGAESMSR 122 (394)
T ss_pred CCCEEEEEeehhccc
Confidence 999999999999884
No 55
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=98.40 E-value=8.6e-07 Score=89.02 Aligned_cols=81 Identities=9% Similarity=0.168 Sum_probs=68.8
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcCEEEEeccC-CCCCCchHHHHHHHcCCCCCcceecccch------------HHHhcCC
Q 043382 100 DDVIIGAIDERLAKTGFKHKDIGILVVNSSL-FNPTPSLSAFIVNHYKLRSNILSYNLGAL------------QSAQVQP 166 (329)
Q Consensus 100 ~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~-~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~------------~lL~a~~ 166 (329)
.+|+.+|++++|+++|++++|||.+|+.|.+ ....+..+..++..+|++.++.+++++.. ++|++|.
T Consensus 28 ~~L~~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p~~~v~~~CaSg~~al~~A~~~I~sG~ 107 (426)
T PRK08170 28 SDLAVAAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIARVVALRLGCGEKVPAWTVQRNCASGMQALDSAAANIALGR 107 (426)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcChHHHHHHHHhCcCCCceeeeccchhhHHHHHHHHHHHHHHCCC
Confidence 4555999999999999999999999998765 23346778889999999756888888765 7889999
Q ss_pred CCeEEEEeecCCCC
Q 043382 167 NSYTLVVSTENITL 180 (329)
Q Consensus 167 ~~~aLVVs~E~~S~ 180 (329)
.+++||+++|.+|.
T Consensus 108 ~d~vLv~G~E~ms~ 121 (426)
T PRK08170 108 ADLVLAGGVEAMSH 121 (426)
T ss_pred CCEEEEEEEecccC
Confidence 99999999998874
No 56
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=98.40 E-value=8.5e-07 Score=87.67 Aligned_cols=79 Identities=16% Similarity=0.259 Sum_probs=64.8
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCEEEEeccCC-CCCCchHHHHHHHcCCCCCcceecccch------------HHHhcCCC
Q 043382 101 DVIIGAIDERLAKTGFKHKDIGILVVNSSLF-NPTPSLSAFIVNHYKLRSNILSYNLGAL------------QSAQVQPN 167 (329)
Q Consensus 101 ~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~-~~~Ps~aa~I~~~Lglr~~v~~~dl~g~------------~lL~a~~~ 167 (329)
+|+.+|++++|+++|++++|||.+|++++.. ...+..+..+++.+|++ +..+++++.. .+|++|..
T Consensus 23 eLa~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~-~~~~~~v~~~casg~~al~~A~~~I~sG~~ 101 (385)
T PRK12578 23 ELAWESIKEALNDAGVSQTDIELVVVGSTAYRGIELYPAPIVAEYSGLT-GKVPLRVEAMCATGLAASLTAYTAVASGLV 101 (385)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccCChHHHHHHHhCCC-CCCeeEEeccCHHHHHHHHHHHHHHHCCCC
Confidence 3449999999999999999999999987653 22233478899999998 4666887665 78899999
Q ss_pred CeEEEEeecCCCC
Q 043382 168 SYTLVVSTENITL 180 (329)
Q Consensus 168 ~~aLVVs~E~~S~ 180 (329)
+++|||++|..|.
T Consensus 102 ~~vLvvg~e~~s~ 114 (385)
T PRK12578 102 DMAIAVGVDKMTE 114 (385)
T ss_pred CEEEEEEEeeccc
Confidence 9999999999874
No 57
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=98.38 E-value=1.1e-06 Score=87.77 Aligned_cols=81 Identities=7% Similarity=0.105 Sum_probs=68.4
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcCEEEEeccCC-CCC-CchHHHHHHHcCCCCCcceecccch------------HHHhcC
Q 043382 100 DDVIIGAIDERLAKTGFKHKDIGILVVNSSLF-NPT-PSLSAFIVNHYKLRSNILSYNLGAL------------QSAQVQ 165 (329)
Q Consensus 100 ~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~-~~~-Ps~aa~I~~~Lglr~~v~~~dl~g~------------~lL~a~ 165 (329)
++|+.+|++++|+++|++|+|||.+|+.|.+. ... +..+.......|++.++.+++|+.. +++++|
T Consensus 29 ~dLa~~A~~~al~~agi~p~~ID~vi~G~~~~~~~~~~~~~r~a~~~~Gl~~~~pa~~Vn~aCaSg~~Ai~~A~~~I~sG 108 (402)
T PRK08242 29 VRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGLPETVPGVQINRFCASGLEAVNLAAAKVRSG 108 (402)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccccccHHHHHHHHcCCCCCCCeEEEcchhhhHHHHHHHHHHHHHcC
Confidence 45559999999999999999999999998773 333 3455566688899767999999876 789999
Q ss_pred CCCeEEEEeecCCCC
Q 043382 166 PNSYTLVVSTENITL 180 (329)
Q Consensus 166 ~~~~aLVVs~E~~S~ 180 (329)
..+++|++++|.+|.
T Consensus 109 ~~d~vLv~G~E~mS~ 123 (402)
T PRK08242 109 WDDLVIAGGVESMSR 123 (402)
T ss_pred CCCEEEEEEEEccCC
Confidence 999999999999984
No 58
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=98.37 E-value=9.6e-07 Score=86.49 Aligned_cols=80 Identities=19% Similarity=0.140 Sum_probs=68.5
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcCEEEEeccC-CCCCCchHHHHHHHcCCCCCcceecccch------------HHHhcCC
Q 043382 100 DDVIIGAIDERLAKTGFKHKDIGILVVNSSL-FNPTPSLSAFIVNHYKLRSNILSYNLGAL------------QSAQVQP 166 (329)
Q Consensus 100 ~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~-~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~------------~lL~a~~ 166 (329)
.+|+.+|++++|+++|++++|||.+++.++. ....|..+..+++++|++ ++..++++.. ++++++.
T Consensus 17 ~eL~~~A~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~a~~va~~lGl~-~~~~~~v~~~c~sg~~al~~Aa~~I~sG~ 95 (375)
T cd00829 17 LELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGLL-GKPATRVEAAGASGSAAVRAAAAAIASGL 95 (375)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecccccccccchHHHHHHHcCCC-CcceeeEeCccHHHHHHHHHHHHHHHhCC
Confidence 4455999999999999999999999998765 444678889999999997 6777777665 7889999
Q ss_pred CCeEEEEeecCCCC
Q 043382 167 NSYTLVVSTENITL 180 (329)
Q Consensus 167 ~~~aLVVs~E~~S~ 180 (329)
.+.+||+++|..|.
T Consensus 96 ~~~vlv~g~e~~s~ 109 (375)
T cd00829 96 ADVVLVVGAEKMSD 109 (375)
T ss_pred CCEEEEEEEeeccc
Confidence 99999999999874
No 59
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=98.32 E-value=1.5e-06 Score=86.41 Aligned_cols=80 Identities=13% Similarity=0.060 Sum_probs=66.9
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcCEEEEeccC-CCCCCchHHH-HHHHcCCCCCcceecccch------------HHHhcC
Q 043382 100 DDVIIGAIDERLAKTGFKHKDIGILVVNSSL-FNPTPSLSAF-IVNHYKLRSNILSYNLGAL------------QSAQVQ 165 (329)
Q Consensus 100 ~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~-~~~~Ps~aa~-I~~~Lglr~~v~~~dl~g~------------~lL~a~ 165 (329)
.+++.+|++++|+++|++|+|||.+|++|+. +...+..+.. +++.+|+. ++.+++++.. ++|+++
T Consensus 24 ~el~~~a~~~Al~~agl~p~dID~vi~g~~~~~~~g~~~~~~~~~~~lg~~-~~p~~~V~~~Casg~~al~~A~~~I~sG 102 (393)
T cd00826 24 HEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGLQ-EAPAIGMNNLCGSGLRALALAMQLIAGG 102 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEEccCCcccCcHHHHHHHHcCCCC-CCcEEEecchhHHHHHHHHHHHHHHHCC
Confidence 5566999999999999999999999998876 3334555553 67888886 7899999876 789999
Q ss_pred CCCeEEEEeecCCCC
Q 043382 166 PNSYTLVVSTENITL 180 (329)
Q Consensus 166 ~~~~aLVVs~E~~S~ 180 (329)
..+++||+++|.+|.
T Consensus 103 ~~~~vlv~g~e~~s~ 117 (393)
T cd00826 103 DANCILAGGFEKMET 117 (393)
T ss_pred CCCEEEEEeeecccc
Confidence 999999999999874
No 60
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=98.27 E-value=2.2e-06 Score=85.25 Aligned_cols=79 Identities=14% Similarity=0.092 Sum_probs=65.8
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcCEEEEeccCC--CCCCchHHHHHHHcCCCCCcceecccch------------HHHhcC
Q 043382 100 DDVIIGAIDERLAKTGFKHKDIGILVVNSSLF--NPTPSLSAFIVNHYKLRSNILSYNLGAL------------QSAQVQ 165 (329)
Q Consensus 100 ~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~--~~~Ps~aa~I~~~Lglr~~v~~~dl~g~------------~lL~a~ 165 (329)
.+|+.+|++++|+++|++++|||.+|+++..+ ...|..+..+++++|+. +..++++++. .++++|
T Consensus 30 ~~L~~~A~~~Al~dagl~~~dID~~i~~~~~~~~~~~~~~a~~l~~~lG~~-~~~~~~V~~~gasG~~al~~A~~~I~sG 108 (392)
T PRK06065 30 QELAWEAASKALDEAGLELKDIDCVVIGSAPDAFDGVHMKGEYLSHGSGGI-RKPVSRVYVGGATGVMTAIAGWYHVASG 108 (392)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCcccccccHHHHHHHHcCCC-CCCeEEEecCchhHHHHHHHHHHHHhCC
Confidence 34559999999999999999999999976433 23677888999999997 4777888653 789999
Q ss_pred CCCeEEEEeecCCC
Q 043382 166 PNSYTLVVSTENIT 179 (329)
Q Consensus 166 ~~~~aLVVs~E~~S 179 (329)
..++||||+.|..+
T Consensus 109 ~ad~vLVvg~e~~~ 122 (392)
T PRK06065 109 LCQKVLAVAEEKMS 122 (392)
T ss_pred CCCEEEEEEeeccc
Confidence 99999999999864
No 61
>PRK05790 putative acyltransferase; Provisional
Probab=98.27 E-value=2.5e-06 Score=84.63 Aligned_cols=81 Identities=9% Similarity=0.109 Sum_probs=65.2
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcCEEEEeccCC-CCCCchHHHHHHHcCCCCCcceecccch------------HHHhcCC
Q 043382 100 DDVIIGAIDERLAKTGFKHKDIGILVVNSSLF-NPTPSLSAFIVNHYKLRSNILSYNLGAL------------QSAQVQP 166 (329)
Q Consensus 100 ~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~-~~~Ps~aa~I~~~Lglr~~v~~~dl~g~------------~lL~a~~ 166 (329)
.+|+.+|++++|+++|++|+|||.+|+.|.+. ...+..+..++..+|++.++.+++++.. .++++|.
T Consensus 27 ~~La~~A~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~gl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~ 106 (393)
T PRK05790 27 VELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGAGQNPARQAALKAGLPVEVPALTINKVCGSGLKAVALAAQAIRAGD 106 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCeEEEEEecCCCCCCcHHHHHHHHcCCCCCCceeeecccchHHHHHHHHHHHHHHcCC
Confidence 44559999999999999999999999887652 2344455567788899755778887665 7899999
Q ss_pred CCeEEEEeecCCCC
Q 043382 167 NSYTLVVSTENITL 180 (329)
Q Consensus 167 ~~~aLVVs~E~~S~ 180 (329)
.+++||++.|..|.
T Consensus 107 ~d~vLv~G~e~~s~ 120 (393)
T PRK05790 107 ADIVVAGGQESMSQ 120 (393)
T ss_pred CCEEEEEeeecccc
Confidence 99999999999873
No 62
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=98.25 E-value=2.5e-06 Score=84.89 Aligned_cols=80 Identities=13% Similarity=0.094 Sum_probs=64.6
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcCEEEEeccC-CCCCCchHHHHHHHcCCCCCcceecccch------------HHHhcCC
Q 043382 100 DDVIIGAIDERLAKTGFKHKDIGILVVNSSL-FNPTPSLSAFIVNHYKLRSNILSYNLGAL------------QSAQVQP 166 (329)
Q Consensus 100 ~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~-~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~------------~lL~a~~ 166 (329)
++|+.+|++++|+++|++|+|||.+|+.++. ....+.........+|++.++.+++++.. +++++|.
T Consensus 32 ~eL~~~a~~~aL~~Agi~~~dID~vi~G~~~~~~~~~~~~~~~~l~ag~~~~~p~~~V~~aCaSG~~Av~~A~~~I~sG~ 111 (397)
T PRK06954 32 PQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQGQAPARQAALGAGLPLSVGCTTVNKMCGSGMRAAMFAHDMLVAGS 111 (397)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccchHHHHHHHHcCCCCCCccEeeccccchHHHHHHHHHHHHHHCCC
Confidence 5566999999999999999999999998776 33333444445556677756888988775 7899999
Q ss_pred CCeEEEEeecCCC
Q 043382 167 NSYTLVVSTENIT 179 (329)
Q Consensus 167 ~~~aLVVs~E~~S 179 (329)
.+.+||++.|.+|
T Consensus 112 ~d~vLv~G~E~ms 124 (397)
T PRK06954 112 VDVIVAGGMESMT 124 (397)
T ss_pred CCEEEEEeeeccC
Confidence 9999999999998
No 63
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=98.17 E-value=4.9e-06 Score=82.32 Aligned_cols=80 Identities=21% Similarity=0.181 Sum_probs=67.0
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcCEEEEeccC-CC--CCCchHHHHHHHcCCCCCcceecccch------------HHHhc
Q 043382 100 DDVIIGAIDERLAKTGFKHKDIGILVVNSSL-FN--PTPSLSAFIVNHYKLRSNILSYNLGAL------------QSAQV 164 (329)
Q Consensus 100 ~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~-~~--~~Ps~aa~I~~~Lglr~~v~~~dl~g~------------~lL~a 164 (329)
.+++.+|++++|+++|++++|||.+|+.++. +. ..|..+.+++..+|++ ...+++++.. ++|++
T Consensus 23 ~eLa~~a~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~~~a~~va~~lGl~-~~~~~~v~~aCasg~~ai~~A~~~I~s 101 (389)
T PRK06064 23 RDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGLA-PIPATRVEAACASGGAALRQAYLAVAS 101 (389)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccccccHHHHHHHHcCCC-CCCeeEEeCCcHHHHHHHHHHHHHHHC
Confidence 4555999999999999999999999987664 33 3477889999999997 6777777654 78999
Q ss_pred CCCCeEEEEeecCCCC
Q 043382 165 QPNSYTLVVSTENITL 180 (329)
Q Consensus 165 ~~~~~aLVVs~E~~S~ 180 (329)
|..+++||+++|..|.
T Consensus 102 G~~~~vLv~G~e~~s~ 117 (389)
T PRK06064 102 GEADVVLAAGVEKMTD 117 (389)
T ss_pred CCCCEEEEEEEEeccc
Confidence 9999999999998763
No 64
>PRK12404 stage V sporulation protein AD; Provisional
Probab=98.13 E-value=4.6e-06 Score=80.41 Aligned_cols=78 Identities=13% Similarity=0.182 Sum_probs=65.2
Q ss_pred Hhhc-hHHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCcceecccch------------HHH
Q 043382 96 KKET-DDVIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSYNLGAL------------QSA 162 (329)
Q Consensus 96 ~~ea-~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~------------~lL 162 (329)
.|++ .+|+.+|+++||+|+|++++|||.+++.+.+...+|+. .++++||++ .+++.++ .++
T Consensus 50 wEkAE~~L~~EA~~~AL~kAGI~~~DID~i~vGdL~nQ~ipss--fvar~LGIP----~~gV~gACSTg~eAL~lAa~~V 123 (334)
T PRK12404 50 YEKAERKLLEEACSRAIEKAKLRKEDIQFFLAGDLMNQITPTS--FAARTLGIP----YLGLFGACSTSMEGLALAALIV 123 (334)
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcCcHH--HHHHHhCCC----ccceeecCHHHHHHHHHHHHHH
Confidence 3445 37889999999999999999999999999887777775 999999965 4778776 678
Q ss_pred hcCCCCeEEEEeecCCC
Q 043382 163 QVQPNSYTLVVSTENIT 179 (329)
Q Consensus 163 ~a~~~~~aLVVs~E~~S 179 (329)
++|..++||++++--.+
T Consensus 124 aSG~Ad~VLavtsSH~~ 140 (334)
T PRK12404 124 NSGGAKYVLTGASSHNA 140 (334)
T ss_pred HcCCCCEEEEEeCcccc
Confidence 89999999998876554
No 65
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....
Probab=98.11 E-value=7.2e-06 Score=77.31 Aligned_cols=82 Identities=13% Similarity=0.186 Sum_probs=68.9
Q ss_pred chHHHHHHHHHHHHhcCCCCCCcCEEEEeccC-CCCCCchHHHHHHHcCCCCCcceecccch------------HHHhcC
Q 043382 99 TDDVIIGAIDERLAKTGFKHKDIGILVVNSSL-FNPTPSLSAFIVNHYKLRSNILSYNLGAL------------QSAQVQ 165 (329)
Q Consensus 99 a~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~-~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~------------~lL~a~ 165 (329)
.++|+..|++++|++++++|+|||.+++.|.. ....+..+..+.-..|++.+++++.++.. ..|++|
T Consensus 26 ~~~L~~~a~~~al~~~~i~~~~Id~v~~G~~~~~~~g~~~ar~~~l~aGl~~~vp~~~V~~~CaSG~~Av~~a~~~I~sG 105 (264)
T PF00108_consen 26 PEDLAAEAVKAALERAGIDPEDIDAVIVGNVLQEGEGQNIARQAALAAGLPESVPATTVNRACASGLQAVHLAAMAIASG 105 (264)
T ss_dssp HHHHHHHHHHHHHHHHTSHGGGEEEEEEE-SSSCTTTCHHHHHHHHHTTS-TTSEEEEEE-GGGHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhcccchhhhhhcCcccccccccchhhhhhhhhhcccccccceeeehhhhhHHHHHHHHhhhhhcCC
Confidence 35666999999999999999999999999877 44477788888889999888999988876 788999
Q ss_pred CCCeEEEEeecCCCC
Q 043382 166 PNSYTLVVSTENITL 180 (329)
Q Consensus 166 ~~~~aLVVs~E~~S~ 180 (329)
..+.+|+++.|.+|.
T Consensus 106 ~~dvvlagGvE~mS~ 120 (264)
T PF00108_consen 106 EADVVLAGGVESMSR 120 (264)
T ss_dssp S-SEEEEEEEEETTT
T ss_pred CccEEEEeccccccc
Confidence 999999999999995
No 66
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=98.08 E-value=1.2e-05 Score=79.85 Aligned_cols=81 Identities=14% Similarity=0.150 Sum_probs=68.6
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcCEEEEeccC-CCC-CCchHHHHHHHcCCCCCcceecccch------------HHHhcC
Q 043382 100 DDVIIGAIDERLAKTGFKHKDIGILVVNSSL-FNP-TPSLSAFIVNHYKLRSNILSYNLGAL------------QSAQVQ 165 (329)
Q Consensus 100 ~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~-~~~-~Ps~aa~I~~~Lglr~~v~~~dl~g~------------~lL~a~ 165 (329)
.+|+.+|++++|+++|+.++|||.+|+.++. ... .|..+.+++..+|++.++++++++.+ ..|++|
T Consensus 28 ~eLa~~A~~~AL~~ag~~~~dID~vi~g~~~~~~~~g~~~a~~~~~~lGl~~~~p~~~V~~aCaSG~~Al~~A~~~I~sG 107 (391)
T PRK07661 28 DDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQGLNMARNIGALAGLPYTVPAITINRYCSSGLQSIAYGAERIMLG 107 (391)
T ss_pred HHHHHHHHHHHHHhcCCChhHCCEEEEEeccccccccchHHHHHHHHcCCCCCcceeehhhhhhHHHHHHHHHHHHHHcC
Confidence 4556999999999999888999999999766 333 47778889999999855888888875 778999
Q ss_pred CCCeEEEEeecCCCC
Q 043382 166 PNSYTLVVSTENITL 180 (329)
Q Consensus 166 ~~~~aLVVs~E~~S~ 180 (329)
..+.+||++.|.+|.
T Consensus 108 ~~d~vLv~G~E~ms~ 122 (391)
T PRK07661 108 HSEAVIAGGAESMSL 122 (391)
T ss_pred CCCEEEEEEEeeccc
Confidence 999999999999883
No 67
>PLN02287 3-ketoacyl-CoA thiolase
Probab=98.08 E-value=1.1e-05 Score=81.73 Aligned_cols=81 Identities=14% Similarity=0.170 Sum_probs=65.3
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcCEEEEeccC-CCCCCchH-HHHHHHcCCCCCcceecccch------------HHHhcC
Q 043382 100 DDVIIGAIDERLAKTGFKHKDIGILVVNSSL-FNPTPSLS-AFIVNHYKLRSNILSYNLGAL------------QSAQVQ 165 (329)
Q Consensus 100 ~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~-~~~~Ps~a-a~I~~~Lglr~~v~~~dl~g~------------~lL~a~ 165 (329)
.+|+.+|++++|+++|++++|||.+|+.+.. ....+... .+++..+|++..+.+++++.. +.|++|
T Consensus 72 ~eLa~eA~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~~a~~~Gl~~~~pa~~V~~~CaSG~~Ai~~Aa~~I~sG 151 (452)
T PLN02287 72 DDLLAPVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAG 151 (452)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHHHHHHCCCCCCcceEEEeccCchHHHHHHHHHHHHHcC
Confidence 4566999999999999999999999998765 34444444 466677899855777777655 778999
Q ss_pred CCCeEEEEeecCCCC
Q 043382 166 PNSYTLVVSTENITL 180 (329)
Q Consensus 166 ~~~~aLVVs~E~~S~ 180 (329)
..+.+||++.|.+|.
T Consensus 152 ~~dvvLv~GvE~mS~ 166 (452)
T PLN02287 152 FYDIGIGAGVESMTT 166 (452)
T ss_pred CCCeEEEEeEEecCC
Confidence 999999999999873
No 68
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=98.02 E-value=1.7e-05 Score=79.21 Aligned_cols=80 Identities=11% Similarity=0.147 Sum_probs=65.4
Q ss_pred hHHHHHHHHHHHHhc-CCCCCCcCEEEEeccC-C-CCCCchHHHHHHHcCCCCCcceecccch------------HHHhc
Q 043382 100 DDVIIGAIDERLAKT-GFKHKDIGILVVNSSL-F-NPTPSLSAFIVNHYKLRSNILSYNLGAL------------QSAQV 164 (329)
Q Consensus 100 ~~l~~~Aa~~aL~ka-gv~p~dId~LVv~ss~-~-~~~Ps~aa~I~~~Lglr~~v~~~dl~g~------------~lL~a 164 (329)
.+|+.+|++++|+++ |++|+|||.+|+.+.. + ...+..+..++..+|++ ++.++.++.. +.+++
T Consensus 28 ~eL~~~A~~~AL~da~gl~~~dID~vv~g~~~~~~~~g~~~~~~~a~~lGl~-~~p~~~v~~~caSG~~av~~Aa~~I~s 106 (406)
T PRK07851 28 DDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVLLGYD-FLPGTTVNRYCSSSLQTTRMAFHAIKA 106 (406)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCCEEEEEcccccccccCCHHHHHHHHcCCC-CCCeeeeeccchhHHHHHHHHHHHHHC
Confidence 456699999999996 9999999999987543 2 22466778999999996 5777777443 78999
Q ss_pred CCCCeEEEEeecCCCC
Q 043382 165 QPNSYTLVVSTENITL 180 (329)
Q Consensus 165 ~~~~~aLVVs~E~~S~ 180 (329)
|..+.+||++.|..|.
T Consensus 107 G~~d~vLv~G~e~~s~ 122 (406)
T PRK07851 107 GEGDVFISAGVETVSR 122 (406)
T ss_pred CCCCEEEEeeEEeccc
Confidence 9999999999998764
No 69
>PRK06158 thiolase; Provisional
Probab=98.00 E-value=1.3e-05 Score=79.33 Aligned_cols=76 Identities=12% Similarity=0.070 Sum_probs=59.6
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCcceecccch------------HHHhcCCC
Q 043382 100 DDVIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSYNLGAL------------QSAQVQPN 167 (329)
Q Consensus 100 ~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~------------~lL~a~~~ 167 (329)
.+|+.+|+++||+++|++++|||.+|+++.. ...|+ ..+++++|++ +...++++.. .+|++|..
T Consensus 29 ~eL~~eA~~~Al~dAgl~~~dID~iv~~~~~-~~~~~--~~la~~lGl~-~~~~~~~~~g~~s~~~al~~A~~~I~sG~~ 104 (384)
T PRK06158 29 MELLAQAAHRALADAGLTMADVDGLFTASPD-DALWG--LSVAEYLGIR-PRFVDGTMIGGSSFLAHLLPAALALEAGLC 104 (384)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCC-CCCcH--HHHHHHcCCC-CeeeccccCccHHHHHHHHHHHHHHHcCCC
Confidence 3555999999999999999999999987643 33454 5799999997 4667776543 77899999
Q ss_pred CeEEEE-eecCCC
Q 043382 168 SYTLVV-STENIT 179 (329)
Q Consensus 168 ~~aLVV-s~E~~S 179 (329)
++|||+ +.|..+
T Consensus 105 d~vLV~~g~~~~~ 117 (384)
T PRK06158 105 DVALICYGSNQRS 117 (384)
T ss_pred CEEEEeecccccc
Confidence 999998 555444
No 70
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=97.97 E-value=1.9e-05 Score=78.68 Aligned_cols=77 Identities=19% Similarity=0.186 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCEEEEeccC-CCCC-----CchHHHHHHHcCCCCCcceecccch------------HHH
Q 043382 101 DVIIGAIDERLAKTGFKHKDIGILVVNSSL-FNPT-----PSLSAFIVNHYKLRSNILSYNLGAL------------QSA 162 (329)
Q Consensus 101 ~l~~~Aa~~aL~kagv~p~dId~LVv~ss~-~~~~-----Ps~aa~I~~~Lglr~~v~~~dl~g~------------~lL 162 (329)
+|+.+|++++|+++|++|+|||.+|+++++ ++.. |+....++. ++. ++++++++++ .++
T Consensus 28 eLa~eA~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~~~~--~~~-g~~~~~v~~~Casg~~al~~Aa~~I 104 (403)
T PRK06289 28 DLTREVVDGTLAAAGVDADDIEVVHVGNFFGELFAGQGHLGAMPATVHP--ALW-GVPASRHEAACASGSVATLAAMADL 104 (403)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccccchHHHHHhh--cCC-CCceeecccccHHHHHHHHHHHHHH
Confidence 444999999999999999999999988654 3222 333333333 343 3556776654 788
Q ss_pred hcCCCCeEEEEeecCCCC
Q 043382 163 QVQPNSYTLVVSTENITL 180 (329)
Q Consensus 163 ~a~~~~~aLVVs~E~~S~ 180 (329)
++|..+++||+++|..|.
T Consensus 105 ~sG~~~~VLvvg~e~~s~ 122 (403)
T PRK06289 105 RAGRYDVALVVGVELMKT 122 (403)
T ss_pred HcCCCCEEEEEEEEecCC
Confidence 999999999999999873
No 71
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=97.93 E-value=2.5e-05 Score=78.62 Aligned_cols=82 Identities=16% Similarity=0.163 Sum_probs=67.9
Q ss_pred chHHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCC-CCchHHHHHHHcCCCCCcceecccch------------HHHhcC
Q 043382 99 TDDVIIGAIDERLAKTGFKHKDIGILVVNSSLFNP-TPSLSAFIVNHYKLRSNILSYNLGAL------------QSAQVQ 165 (329)
Q Consensus 99 a~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~-~Ps~aa~I~~~Lglr~~v~~~dl~g~------------~lL~a~ 165 (329)
.++|+.+|++++|+++|++|+|||.+|+.+..... .+.++.+++..+|++..++++.++.. ..+++|
T Consensus 29 ~~eL~~~a~~~al~~agl~~~~ID~vi~G~~~~~~~~~~~ar~~a~~aGl~~~~P~~tV~~aCaSG~~Ai~~Aa~~I~sG 108 (428)
T PRK08963 29 AVDLGKMVVGELLARSEIDPELIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSRACATSFQAVANVAESIMAG 108 (428)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCccHHHHHHHHHCCCCCCCcceeehhhhHHHHHHHHHHHHHHHCC
Confidence 35666999999999999999999999999865322 35567779999999855777777665 788999
Q ss_pred CCCeEEEEeecCCCC
Q 043382 166 PNSYTLVVSTENITL 180 (329)
Q Consensus 166 ~~~~aLVVs~E~~S~ 180 (329)
..+.+||++.|.+|.
T Consensus 109 ~~dvvLvgG~Esms~ 123 (428)
T PRK08963 109 TIDIGIAGGADSSSV 123 (428)
T ss_pred CCCEEEEecccccCC
Confidence 999999999999884
No 72
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=97.93 E-value=2.3e-05 Score=78.05 Aligned_cols=82 Identities=11% Similarity=0.153 Sum_probs=68.8
Q ss_pred chHHHHHHHHHHHHhcCCCCCCcCEEEEeccC-CCCCCchHHHHHHHcCCCCCcceecccch------------HHHhcC
Q 043382 99 TDDVIIGAIDERLAKTGFKHKDIGILVVNSSL-FNPTPSLSAFIVNHYKLRSNILSYNLGAL------------QSAQVQ 165 (329)
Q Consensus 99 a~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~-~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~------------~lL~a~ 165 (329)
+++|+..|++++|+++|++|+|||.+|+.+.. ...-+..+.+++.++|++.+++++.++.. +.+++|
T Consensus 27 ~~~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~g~~~~r~~~~~~Gl~~~~p~~~V~~~CaSG~~Ai~~A~~~I~sG 106 (392)
T PRK06633 27 APMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTLIHAGIPKEVPGYTINKVCGSGLKSVALAANSIMTG 106 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCccccccHHHHHHHHHCCCCCCccchhhcchhHHHHHHHHHHHHHHHcC
Confidence 45666999999999999999999999998765 22345677778899999866888887665 788999
Q ss_pred CCCeEEEEeecCCCC
Q 043382 166 PNSYTLVVSTENITL 180 (329)
Q Consensus 166 ~~~~aLVVs~E~~S~ 180 (329)
..+.+|+++.|.+|.
T Consensus 107 ~~dvvla~G~E~ms~ 121 (392)
T PRK06633 107 DNEIVIAGGQENMSL 121 (392)
T ss_pred CCCEEEEcccccCCC
Confidence 999999999999884
No 73
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=97.92 E-value=1.8e-05 Score=78.71 Aligned_cols=78 Identities=14% Similarity=0.185 Sum_probs=62.2
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcCEEEEeccCC-CC---CCchHHHHHHHcCCCCCcceecccch------------HHHh
Q 043382 100 DDVIIGAIDERLAKTGFKHKDIGILVVNSSLF-NP---TPSLSAFIVNHYKLRSNILSYNLGAL------------QSAQ 163 (329)
Q Consensus 100 ~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~-~~---~Ps~aa~I~~~Lglr~~v~~~dl~g~------------~lL~ 163 (329)
.+|+.+|++++|+++|++|+|||.+|+.+... +. .++..+.++..++ .++.+++++.. ++++
T Consensus 33 ~~L~~~a~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~l~a~~~--~~~p~~~V~~~CaSg~~ai~~A~~~I~ 110 (394)
T PRK06445 33 EELAAMLINRLIEKTGIKPEEIDDIITGCALQVGENWLYGGRHPIFLARLP--YNIPAMAVDRQCASSLTTVSIGAMEIA 110 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCeeEEEeecCCCcccccHHHHHHHHcCCC--CCCcchhhhhhhHHHHHHHHHHHHHHH
Confidence 45559999999999999999999999988763 22 3355555666666 36888888765 7889
Q ss_pred cCCCCeEEEEeecCCC
Q 043382 164 VQPNSYTLVVSTENIT 179 (329)
Q Consensus 164 a~~~~~aLVVs~E~~S 179 (329)
+|..+++||+++|.+|
T Consensus 111 sG~~d~vLv~G~e~ms 126 (394)
T PRK06445 111 TGMADIVIAGGVEHMT 126 (394)
T ss_pred cCCCCEEEEeeecccc
Confidence 9999999999999887
No 74
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=97.85 E-value=4.2e-05 Score=75.79 Aligned_cols=80 Identities=18% Similarity=0.146 Sum_probs=60.3
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcCEEEEeccC-CC--CCCchHHHHHHHcCCCCCcceecccch------------HHHhc
Q 043382 100 DDVIIGAIDERLAKTGFKHKDIGILVVNSSL-FN--PTPSLSAFIVNHYKLRSNILSYNLGAL------------QSAQV 164 (329)
Q Consensus 100 ~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~-~~--~~Ps~aa~I~~~Lglr~~v~~~dl~g~------------~lL~a 164 (329)
.+|+.+|++++|+++|++++|||.+|+.++. .. ..+..+..+...+|++ ++.+++++.. +++++
T Consensus 23 ~eL~~eA~~~AL~dAgl~~~dId~vi~g~~~~~~~~~~~~~~~~~~~~~gl~-~~p~~~v~~~CaSg~~Al~~A~~~I~s 101 (389)
T PRK07516 23 ESLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSPQDFPASLVLQADPALR-FKPATRVENACATGSAAVYAALDAIEA 101 (389)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCccccccchhHHHHHhcCCC-CCceeeeccccHHHHHHHHHHHHHHHC
Confidence 4555999999999999999999999998653 21 1111222344566776 6788888544 78999
Q ss_pred CCCCeEEEEeecCCCC
Q 043382 165 QPNSYTLVVSTENITL 180 (329)
Q Consensus 165 ~~~~~aLVVs~E~~S~ 180 (329)
|..+++||+++|..|.
T Consensus 102 G~~d~vLvvg~e~~s~ 117 (389)
T PRK07516 102 GRARIVLVVGAEKMTA 117 (389)
T ss_pred CCCCEEEEEEehhhcc
Confidence 9999999999999873
No 75
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=97.84 E-value=5.3e-05 Score=75.62 Aligned_cols=82 Identities=7% Similarity=0.091 Sum_probs=70.4
Q ss_pred chHHHHHHHHHHHHh-cCCCCCCcCEEEEeccCC--CCCCchHHHHHHHcCCCCCcceecccch------------HHHh
Q 043382 99 TDDVIIGAIDERLAK-TGFKHKDIGILVVNSSLF--NPTPSLSAFIVNHYKLRSNILSYNLGAL------------QSAQ 163 (329)
Q Consensus 99 a~~l~~~Aa~~aL~k-agv~p~dId~LVv~ss~~--~~~Ps~aa~I~~~Lglr~~v~~~dl~g~------------~lL~ 163 (329)
+++|+..|++++|+| +|++|+|||.+|+.|... ...+..+..+..+.|++.+++++.++.. +.++
T Consensus 26 ~~~L~~~a~~~al~r~a~i~~~~Id~vi~G~~~~~~~~g~~~ar~~~l~~Gl~~~vp~~tV~~~CaSG~~Av~~A~~~I~ 105 (400)
T PRK13359 26 ADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGLPHGVPGSTINRLCGSGMDAVGVAARAIK 105 (400)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEEeccchhHHHHHHHHHHHHH
Confidence 356669999999997 599999999999998762 2237888899999999977998888765 7899
Q ss_pred cCCCCeEEEEeecCCCC
Q 043382 164 VQPNSYTLVVSTENITL 180 (329)
Q Consensus 164 a~~~~~aLVVs~E~~S~ 180 (329)
+|..+.+|+++.|.+|.
T Consensus 106 sG~~divlagGvEsmS~ 122 (400)
T PRK13359 106 SGEAALMIAGGVESMSR 122 (400)
T ss_pred cCCCCEEEEeeeeccCC
Confidence 99999999999999984
No 76
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=97.84 E-value=4.9e-05 Score=75.87 Aligned_cols=81 Identities=9% Similarity=0.126 Sum_probs=68.3
Q ss_pred hHHHHHHHHHHHHh-cCCCCCCcCEEEEeccCC--CCCCchHHHHHHHcCCCCCcceecccch------------HHHhc
Q 043382 100 DDVIIGAIDERLAK-TGFKHKDIGILVVNSSLF--NPTPSLSAFIVNHYKLRSNILSYNLGAL------------QSAQV 164 (329)
Q Consensus 100 ~~l~~~Aa~~aL~k-agv~p~dId~LVv~ss~~--~~~Ps~aa~I~~~Lglr~~v~~~dl~g~------------~lL~a 164 (329)
++|+..|++++|++ +|++|+|||.+|+.+... ...+..+..++.+.|++.+++++.++.. +.+++
T Consensus 27 ~~L~~~a~~~al~~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~vP~~tV~~aCaSG~~Ai~~A~~~I~s 106 (401)
T PRK09050 27 DDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGLPVSVPGTTINRLCGSGMDAVGTAARAIKA 106 (401)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccchHHHHHHHHcCCCCCCceEEEecccccHHHHHHHHHHHHHC
Confidence 56669999999996 799999999999987653 2236677779999999877888888665 78999
Q ss_pred CCCCeEEEEeecCCCC
Q 043382 165 QPNSYTLVVSTENITL 180 (329)
Q Consensus 165 ~~~~~aLVVs~E~~S~ 180 (329)
|..+.+|+++.|.+|.
T Consensus 107 G~~dvvlagGvEsmS~ 122 (401)
T PRK09050 107 GEAELMIAGGVESMSR 122 (401)
T ss_pred CCCCEEEEeccccccc
Confidence 9999999999999984
No 77
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=97.83 E-value=5.7e-05 Score=74.99 Aligned_cols=81 Identities=9% Similarity=0.114 Sum_probs=64.1
Q ss_pred chHHHHHHHHHHHHhcCCCCCCcCEEEEeccCC-CCCCchHHHHHHHcCCCCCcceecccch------------HHHhcC
Q 043382 99 TDDVIIGAIDERLAKTGFKHKDIGILVVNSSLF-NPTPSLSAFIVNHYKLRSNILSYNLGAL------------QSAQVQ 165 (329)
Q Consensus 99 a~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~-~~~Ps~aa~I~~~Lglr~~v~~~dl~g~------------~lL~a~ 165 (329)
+.+|+.+|++++|+++|++|+|||.+|+.+... ...+..+..++..+|++.++.++.++.. ..+++|
T Consensus 26 ~~~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~v~~~caSg~~av~~Aa~~I~sG 105 (388)
T PRK06366 26 APQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGLPFGVTKYTVNVVCASGMLAVESAAREIMLG 105 (388)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCccCcHHHHHHHHCCCCCCCcceeeechhhHHHHHHHHHHHHHhcC
Confidence 345669999999999999999999999886542 2233446779999999755666665543 788999
Q ss_pred CCCeEEEEeecCCC
Q 043382 166 PNSYTLVVSTENIT 179 (329)
Q Consensus 166 ~~~~aLVVs~E~~S 179 (329)
..+.+||.+.|..|
T Consensus 106 ~~d~vla~G~e~ms 119 (388)
T PRK06366 106 ERDLVIAGGMENMS 119 (388)
T ss_pred CCCEEEEEeeEccc
Confidence 99999998889877
No 78
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=97.83 E-value=5.7e-05 Score=75.06 Aligned_cols=82 Identities=7% Similarity=0.061 Sum_probs=67.4
Q ss_pred chHHHHHHHHHHHHhcCCCCCCcCEEEEeccC-CCCC-CchHHHHHHHcCCCCCcceecccch------------HHHhc
Q 043382 99 TDDVIIGAIDERLAKTGFKHKDIGILVVNSSL-FNPT-PSLSAFIVNHYKLRSNILSYNLGAL------------QSAQV 164 (329)
Q Consensus 99 a~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~-~~~~-Ps~aa~I~~~Lglr~~v~~~dl~g~------------~lL~a 164 (329)
+.+|+.+|++++|+++|++|+|||.+++.|.. .... +..+..+....|++.+++++.++.. +.+++
T Consensus 26 ~~eL~~~a~~~aL~~agi~~~~Id~v~~G~~~~~~~q~~~~ar~~~l~~Gl~~~~p~~tV~~~CaSG~~A~~~A~~~I~s 105 (387)
T PRK07850 26 AAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNNITRTAWLHAGLPYHVGATTIDCQCGSAQQANHLVAGLIAA 105 (387)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchHHHHHHHhCCCCCCCceEEEecccccHHHHHHHHHHHHHC
Confidence 35666999999999999999999999999765 2322 3355577788999866888888765 78899
Q ss_pred CCCCeEEEEeecCCCC
Q 043382 165 QPNSYTLVVSTENITL 180 (329)
Q Consensus 165 ~~~~~aLVVs~E~~S~ 180 (329)
|..+.+|+++.|.+|.
T Consensus 106 G~~dvvla~G~E~mS~ 121 (387)
T PRK07850 106 GAIDVGIACGVEAMSR 121 (387)
T ss_pred CCCCEEEEEeEecCCC
Confidence 9999999999999984
No 79
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=97.81 E-value=6.5e-05 Score=74.74 Aligned_cols=80 Identities=15% Similarity=0.093 Sum_probs=62.9
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcCEEEEeccCC-CCCCchHHHHHHHcCCCCCcceecccc--h----------HHHhcCC
Q 043382 100 DDVIIGAIDERLAKTGFKHKDIGILVVNSSLF-NPTPSLSAFIVNHYKLRSNILSYNLGA--L----------QSAQVQP 166 (329)
Q Consensus 100 ~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~-~~~Ps~aa~I~~~Lglr~~v~~~dl~g--~----------~lL~a~~ 166 (329)
.+++.+|++++|+++|++++|||.+|+.+... ...+..+..++..+|++.++.++.++. + +.|++|.
T Consensus 26 ~~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~v~~~caSg~~av~~Aa~~I~sG~ 105 (394)
T PLN02644 26 TELGSIAIQAALERAGVDPALVQEVFFGNVLSANLGQAPARQAALGAGLPPSTICTTVNKVCASGMKAVMLAAQSIQLGI 105 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCcCCcHHHHHHHhcCCCCCCceEEEeccchHHHHHHHHHHHHHHcCC
Confidence 45669999999999999999999999876432 213345556889999975566655543 3 7889999
Q ss_pred CCeEEEEeecCCC
Q 043382 167 NSYTLVVSTENIT 179 (329)
Q Consensus 167 ~~~aLVVs~E~~S 179 (329)
.+.+||++.|.+|
T Consensus 106 ~d~vlv~G~E~~s 118 (394)
T PLN02644 106 NDVVVAGGMESMS 118 (394)
T ss_pred CCEEEEEeEEecC
Confidence 9999999999887
No 80
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=97.81 E-value=6.7e-05 Score=74.92 Aligned_cols=82 Identities=16% Similarity=0.195 Sum_probs=67.8
Q ss_pred chHHHHHHHHHHHHhcCCCCCCcCEEEEeccC-C-CCCCchHHHHHHHcCCCCCcceecccch------------HHHhc
Q 043382 99 TDDVIIGAIDERLAKTGFKHKDIGILVVNSSL-F-NPTPSLSAFIVNHYKLRSNILSYNLGAL------------QSAQV 164 (329)
Q Consensus 99 a~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~-~-~~~Ps~aa~I~~~Lglr~~v~~~dl~g~------------~lL~a 164 (329)
.++|+.+|++++|+++|++|+|||.+++.+.. . ...+..+..++...|++..++++.++.. +.+++
T Consensus 26 ~~eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Glp~~~p~~tV~~~CaSG~~Ai~~A~~~I~s 105 (401)
T PRK08131 26 PDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARNALLLAGLPVTVPGQTVNRLCASGLAAVIDAARAITC 105 (401)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHhcCCCCCCceeeeechhhhHHHHHHHHHHHHHC
Confidence 35666999999999999999999999999764 2 2235567779999999866787777665 78899
Q ss_pred CCCCeEEEEeecCCCC
Q 043382 165 QPNSYTLVVSTENITL 180 (329)
Q Consensus 165 ~~~~~aLVVs~E~~S~ 180 (329)
|..+.+|+++.|.+|.
T Consensus 106 G~~dvvlagG~Esms~ 121 (401)
T PRK08131 106 GEGDLYLAGGVESMSR 121 (401)
T ss_pred CCCCEEEEEEecCCCC
Confidence 9999999999999884
No 81
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=97.77 E-value=7.6e-05 Score=74.52 Aligned_cols=81 Identities=11% Similarity=0.123 Sum_probs=68.4
Q ss_pred hHHHHHHHHHHHHh-cCCCCCCcCEEEEeccCC--CCCCchHHHHHHHcCCCCCcceecccch------------HHHhc
Q 043382 100 DDVIIGAIDERLAK-TGFKHKDIGILVVNSSLF--NPTPSLSAFIVNHYKLRSNILSYNLGAL------------QSAQV 164 (329)
Q Consensus 100 ~~l~~~Aa~~aL~k-agv~p~dId~LVv~ss~~--~~~Ps~aa~I~~~Lglr~~v~~~dl~g~------------~lL~a 164 (329)
++|+.+|++++|++ +|++|+|||.+|+.+... ...+..+..++.++|++.+++++.++.. +.+++
T Consensus 26 ~~L~~~a~~~al~~~a~i~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~~p~~~V~~~CaSG~~Ai~~a~~~I~s 105 (400)
T TIGR02430 26 DDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGEDNRNVARMAALLAGLPVSVPGTTVNRLCGSGLDAIGMAARAIKA 105 (400)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEeechhhhHHHHHHHHHHHHHC
Confidence 56669999999996 699999999999987652 2236677789999999867888888765 78999
Q ss_pred CCCCeEEEEeecCCCC
Q 043382 165 QPNSYTLVVSTENITL 180 (329)
Q Consensus 165 ~~~~~aLVVs~E~~S~ 180 (329)
|..+.+|+++.|.+|.
T Consensus 106 G~~d~~la~G~E~ms~ 121 (400)
T TIGR02430 106 GEADLLIAGGVESMSR 121 (400)
T ss_pred CCCCEEEEeccccccC
Confidence 9999999999999984
No 82
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=97.74 E-value=8.8e-05 Score=73.89 Aligned_cols=80 Identities=18% Similarity=0.193 Sum_probs=62.3
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcCEEEEeccCC-CCCCchHHHHHHHcCCCCCcceecccch------------HHHhcCC
Q 043382 100 DDVIIGAIDERLAKTGFKHKDIGILVVNSSLF-NPTPSLSAFIVNHYKLRSNILSYNLGAL------------QSAQVQP 166 (329)
Q Consensus 100 ~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~-~~~Ps~aa~I~~~Lglr~~v~~~dl~g~------------~lL~a~~ 166 (329)
.+++.+|++++|+++|++++|||.+++.+... +........+.+.+|++ .+.++.++.. ..|++|.
T Consensus 28 ~~L~~ea~~~AL~dagl~~~dID~v~vg~~~~~~~~~~~~~~~a~~lGl~-~~~~~~v~~~c~sg~~ai~~A~~~I~sG~ 106 (398)
T PRK06157 28 EDLMVEAFLEALADAGIEPKDIDAAWFGTHYDEIGSGKSGTPLSRALRLP-NIPVTRVENFCATGSEAFRGAVYAVASGA 106 (398)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchhHHHHHHcCCC-CCCEEEEecccHHHHHHHHHHHHHHHCCC
Confidence 56669999999999999999999999876542 21222336688899997 4666655443 7788999
Q ss_pred CCeEEEEeecCCCC
Q 043382 167 NSYTLVVSTENITL 180 (329)
Q Consensus 167 ~~~aLVVs~E~~S~ 180 (329)
.+.+||++.|..|.
T Consensus 107 ~d~vlv~G~e~~s~ 120 (398)
T PRK06157 107 YDIALALGVEKLKD 120 (398)
T ss_pred CCEEEEEEEeeccc
Confidence 99999999999874
No 83
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=97.72 E-value=8.8e-05 Score=74.74 Aligned_cols=82 Identities=16% Similarity=0.139 Sum_probs=66.7
Q ss_pred chHHHHHHHHHHHHhcCCCCCCcCEEEEeccCC-CCCCchHHHHHHHcCCCCCcceecccch------------HHHhcC
Q 043382 99 TDDVIIGAIDERLAKTGFKHKDIGILVVNSSLF-NPTPSLSAFIVNHYKLRSNILSYNLGAL------------QSAQVQ 165 (329)
Q Consensus 99 a~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~-~~~Ps~aa~I~~~Lglr~~v~~~dl~g~------------~lL~a~ 165 (329)
..+|+.+|++++|+++|++|+|||.+|+.+... ...+.++..+.-..|++..++++.++.. +.+++|
T Consensus 31 ~~~L~~~a~~~al~~agl~~~~Id~vi~G~~~~~~~~~~~ar~~~l~aGl~~~~p~~~V~~~CaSG~~A~~~a~~~I~sG 110 (430)
T TIGR02446 31 AVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVTRACATSFQSAVNVAESIMAG 110 (430)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCcCccchHHHHHHHhCCCCCCCchhhhhhhhhHHHHHHHHHHHHHHCC
Confidence 356669999999999999999999999987653 2234455566666799867888877765 789999
Q ss_pred CCCeEEEEeecCCCC
Q 043382 166 PNSYTLVVSTENITL 180 (329)
Q Consensus 166 ~~~~aLVVs~E~~S~ 180 (329)
..+.+|+++.|.+|.
T Consensus 111 ~~dvvla~G~E~mS~ 125 (430)
T TIGR02446 111 AIDIGIAGGADSSSV 125 (430)
T ss_pred CCCEEEEeeeEcccC
Confidence 999999999999984
No 84
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=97.69 E-value=0.00012 Score=72.15 Aligned_cols=82 Identities=12% Similarity=0.167 Sum_probs=60.4
Q ss_pred hchHHHHHHHHHHHHhcCCCCCCcCE----EEEeccCC---------------------------CCCCchHHHHHHHcC
Q 043382 98 ETDDVIIGAIDERLAKTGFKHKDIGI----LVVNSSLF---------------------------NPTPSLSAFIVNHYK 146 (329)
Q Consensus 98 ea~~l~~~Aa~~aL~kagv~p~dId~----LVv~ss~~---------------------------~~~Ps~aa~I~~~Lg 146 (329)
....++..|+++||+++|+++++||. +++.++.. ...+..+..|+.+||
T Consensus 70 ~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 149 (406)
T cd00834 70 RFAQFALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLG 149 (406)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHhC
Confidence 34678899999999999999876654 44444331 123667889999999
Q ss_pred CCCCcceecccch----------HHHhcCCCCeEEEEeecCCC
Q 043382 147 LRSNILSYNLGAL----------QSAQVQPNSYTLVVSTENIT 179 (329)
Q Consensus 147 lr~~v~~~dl~g~----------~lL~a~~~~~aLVVs~E~~S 179 (329)
++.....++-.+. ++|++|..+++||+++|..+
T Consensus 150 l~g~~~~v~~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~ 192 (406)
T cd00834 150 LRGPNYTVSTACASGAHAIGDAARLIRLGRADVVIAGGAEALI 192 (406)
T ss_pred CCCcccccchHHHHHHHHHHHHHHHHHcCCCCEEEEcCccccc
Confidence 9754444443332 78999999999999999875
No 85
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=97.69 E-value=0.00011 Score=73.92 Aligned_cols=80 Identities=14% Similarity=0.039 Sum_probs=61.9
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcCEEEEeccCC-CCCCchH-HHHHHHcCCCCCcceecccch------------HHHhcC
Q 043382 100 DDVIIGAIDERLAKTGFKHKDIGILVVNSSLF-NPTPSLS-AFIVNHYKLRSNILSYNLGAL------------QSAQVQ 165 (329)
Q Consensus 100 ~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~-~~~Ps~a-a~I~~~Lglr~~v~~~dl~g~------------~lL~a~ 165 (329)
++|+.+|+++||+++|++++|||.+|+++... ...+..+ ..++..+|++. ++++.++.. ..|++|
T Consensus 38 ~eL~~eA~~~Al~dagl~~~dID~vv~~~~~~~~~g~~~~~~~~~~~lGl~~-~~~~~v~~~~aSg~~ai~~A~~~I~sG 116 (430)
T PRK06365 38 RERVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQRQLLAGIMVQDYLGLVP-KPSKRIEGGGATGGLAFQAGYEEIASG 116 (430)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcCEEEEecccccccccchhhHHHHHhcCCCC-CceEEEeCCcHHHHHHHHHHHHHHHcC
Confidence 46669999999999999999999988776442 2222333 34679999984 776666543 788999
Q ss_pred CCCeEEEEeecCCCC
Q 043382 166 PNSYTLVVSTENITL 180 (329)
Q Consensus 166 ~~~~aLVVs~E~~S~ 180 (329)
..+.|||+++|..|.
T Consensus 117 ~~~~vLv~G~e~~s~ 131 (430)
T PRK06365 117 RMDCVAVYGFETMSH 131 (430)
T ss_pred CCCEEEEEEeeeccc
Confidence 999999999998773
No 86
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=97.67 E-value=7.8e-05 Score=74.06 Aligned_cols=78 Identities=15% Similarity=0.141 Sum_probs=62.6
Q ss_pred chHHHHHHHHHHHHhcCCCCCCcC----EEEEeccC-CCC-------------------CCchHHHHHHHcCCCCCccee
Q 043382 99 TDDVIIGAIDERLAKTGFKHKDIG----ILVVNSSL-FNP-------------------TPSLSAFIVNHYKLRSNILSY 154 (329)
Q Consensus 99 a~~l~~~Aa~~aL~kagv~p~dId----~LVv~ss~-~~~-------------------~Ps~aa~I~~~Lglr~~v~~~ 154 (329)
...++..|+++||+++|+++++|| .+|+.++. ++. .+..+..|+.++|++. .++
T Consensus 87 ~~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl~g--~~~ 164 (424)
T smart00825 87 QQRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDLRG--PSV 164 (424)
T ss_pred HHHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCCCC--Ccc
Confidence 356889999999999999999999 78877654 221 4567888999999975 455
Q ss_pred cccch------------HHHhcCCCCeEEEEeecCC
Q 043382 155 NLGAL------------QSAQVQPNSYTLVVSTENI 178 (329)
Q Consensus 155 dl~g~------------~lL~a~~~~~aLVVs~E~~ 178 (329)
.++.+ ++|+++..+.+||+++|..
T Consensus 165 ~v~~acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~ 200 (424)
T smart00825 165 TVDTACSSSLVALHLACQSLRSGECDMALAGGVNLI 200 (424)
T ss_pred ccccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeec
Confidence 55554 8899999999999999963
No 87
>PRK08256 lipid-transfer protein; Provisional
Probab=97.66 E-value=0.00012 Score=72.61 Aligned_cols=77 Identities=16% Similarity=0.113 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCcceecccch------------HHHhcCCCC
Q 043382 101 DVIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSYNLGAL------------QSAQVQPNS 168 (329)
Q Consensus 101 ~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~------------~lL~a~~~~ 168 (329)
+++.+|+++||+++|++++|||.+++.+....... ...++..+|++ ++++++++.. ++|++|..+
T Consensus 24 ~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~~--~~~~~~~lGl~-~~~~~~v~~~caSg~~ai~~A~~~I~sG~~d 100 (391)
T PRK08256 24 DMAAEAGRAALADAGIDYDAVQQAYVGYVYGDSTS--GQRALYEVGMT-GIPIVNVNNNCSTGSTALFLARQAVRSGAAD 100 (391)
T ss_pred HHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcch--hHHHHHHcCCC-CCCCcccccccHHHHHHHHHHHHHHHCCCCC
Confidence 44599999999999999999999988765421111 23567889997 4667777655 789999999
Q ss_pred eEEEEeecCCCC
Q 043382 169 YTLVVSTENITL 180 (329)
Q Consensus 169 ~aLVVs~E~~S~ 180 (329)
++||+++|..|.
T Consensus 101 ~vLv~g~e~~s~ 112 (391)
T PRK08256 101 CALALGFEQMQP 112 (391)
T ss_pred EEEEEEEeeccc
Confidence 999999999873
No 88
>KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism]
Probab=97.64 E-value=0.0014 Score=64.27 Aligned_cols=77 Identities=12% Similarity=0.232 Sum_probs=63.0
Q ss_pred HHHHHHHHHHHhcCCCCCCcCEEEEeccC-CCCCCchHHHHHHHcC--CCCCcceecccch------------HHHhcC-
Q 043382 102 VIIGAIDERLAKTGFKHKDIGILVVNSSL-FNPTPSLSAFIVNHYK--LRSNILSYNLGAL------------QSAQVQ- 165 (329)
Q Consensus 102 l~~~Aa~~aL~kagv~p~dId~LVv~ss~-~~~~Ps~aa~I~~~Lg--lr~~v~~~dl~g~------------~lL~a~- 165 (329)
++..++.+++++-.|+++.|+.|-|.|.| ..-.-|.-..+.+-++ -..+|-.+|..++ +.+.+.
T Consensus 63 l~ltvvs~Lmery~i~~~~IGRLEVGTETiiDKSKSVKt~LMqLF~~sgNtdIEGiDttnACYGGtaALfnavnWiESss 142 (462)
T KOG1393|consen 63 LSLTVVSRLMERYNIDPDSIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDIEGIDTTNACYGGTAALFNAVNWIESSS 142 (462)
T ss_pred hhHHHHHHHHHHhCCChhhcceEEecceeccccchHHHHHHHHHhhhcCCCccccccccccccccHHHHHHHhhhhhhcc
Confidence 33999999999999999999999999988 5667777778888887 4446777777666 566665
Q ss_pred -CCCeEEEEeecCC
Q 043382 166 -PNSYTLVVSTENI 178 (329)
Q Consensus 166 -~~~~aLVVs~E~~ 178 (329)
.+++||||++|+-
T Consensus 143 WDGr~aivV~gDIA 156 (462)
T KOG1393|consen 143 WDGRYAIVVCGDIA 156 (462)
T ss_pred cCCceeEEEEeeEE
Confidence 5899999999974
No 89
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=97.62 E-value=0.00018 Score=71.58 Aligned_cols=82 Identities=12% Similarity=0.124 Sum_probs=64.3
Q ss_pred chHHHHHHHHHHHHhcCCCCCCcCEEEEeccCC-CC-CCchHHHHHHHcCCCCCcceecccch------------HHHhc
Q 043382 99 TDDVIIGAIDERLAKTGFKHKDIGILVVNSSLF-NP-TPSLSAFIVNHYKLRSNILSYNLGAL------------QSAQV 164 (329)
Q Consensus 99 a~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~-~~-~Ps~aa~I~~~Lglr~~v~~~dl~g~------------~lL~a 164 (329)
.++|+.+|++.+|+++|++|+|||.+|+.+... .. .+..+..+.-.-|++.+++++.++.. +.+++
T Consensus 26 ~~~L~~~a~~~al~~a~l~~~~Id~vi~G~~~~~~~~~~~~ar~~~l~~gl~~~vP~~tV~~~CaSG~~Ai~~A~~~I~s 105 (390)
T PRK06504 26 PADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNVARNAVLASKLPESVPGTSIDRQCGSSQQALHFAAQAVMS 105 (390)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEEechhhHHHHHHHHHHHHHHC
Confidence 356669999999999999999999999987652 21 24454444444588667888877655 78999
Q ss_pred CCCCeEEEEeecCCCC
Q 043382 165 QPNSYTLVVSTENITL 180 (329)
Q Consensus 165 ~~~~~aLVVs~E~~S~ 180 (329)
|..+.+|+++.|.+|.
T Consensus 106 G~~dvvLagGvEsmS~ 121 (390)
T PRK06504 106 GTMDIVIAAGVESMTR 121 (390)
T ss_pred CCCCEEEEeeeeecCC
Confidence 9999999999999883
No 90
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=97.59 E-value=0.00018 Score=71.55 Aligned_cols=82 Identities=9% Similarity=0.066 Sum_probs=66.7
Q ss_pred chHHHHHHHHHHHHh-cCCCCCCcCEEEEeccCC-CC-CCchHHHHHHHcCCCCCcceecccch------------HHHh
Q 043382 99 TDDVIIGAIDERLAK-TGFKHKDIGILVVNSSLF-NP-TPSLSAFIVNHYKLRSNILSYNLGAL------------QSAQ 163 (329)
Q Consensus 99 a~~l~~~Aa~~aL~k-agv~p~dId~LVv~ss~~-~~-~Ps~aa~I~~~Lglr~~v~~~dl~g~------------~lL~ 163 (329)
++++...+++++|++ +|++|+|||.+|+.+... .. -+..+..+....|++.+++++.++.. ..++
T Consensus 27 ~~~L~~~~~~~al~~~agl~~~~Id~vi~g~~~~~~~~g~~~ar~~~~~~Gl~~~~p~~~V~~~caSG~~Ai~~A~~~I~ 106 (387)
T PRK08947 27 AEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTLEQGFNIARNAALLAGIPHSVPAVTVNRLCGSSMQALHDAARAIM 106 (387)
T ss_pred HHHHHHHHHHHHHHhccCcChHHhCeEEEEeccccccccccHHHHHHHHcCCCCCCcceeeechhHHHHHHHHHHHHHHH
Confidence 366679999999997 799999999999997652 22 24456678889999866877777654 7889
Q ss_pred cCCCCeEEEEeecCCCC
Q 043382 164 VQPNSYTLVVSTENITL 180 (329)
Q Consensus 164 a~~~~~aLVVs~E~~S~ 180 (329)
+|..+.+||++.|.+|.
T Consensus 107 sG~~d~vlv~G~E~ms~ 123 (387)
T PRK08947 107 TGDGDVFLIGGVEHMGH 123 (387)
T ss_pred CCCCCEEEEcccccccc
Confidence 99999999999999884
No 91
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=97.58 E-value=0.00024 Score=71.84 Aligned_cols=82 Identities=20% Similarity=0.188 Sum_probs=63.3
Q ss_pred chHHHHHHHHHHHHhcCCCCCC--cCEEEEeccCC---CCCCchHHHHHHHcCCC------CCcceecccch--------
Q 043382 99 TDDVIIGAIDERLAKTGFKHKD--IGILVVNSSLF---NPTPSLSAFIVNHYKLR------SNILSYNLGAL-------- 159 (329)
Q Consensus 99 a~~l~~~Aa~~aL~kagv~p~d--Id~LVv~ss~~---~~~Ps~aa~I~~~Lglr------~~v~~~dl~g~-------- 159 (329)
.++|+.+|++++|+++|++++| ||.+|+.+... ...+..+..++..+|++ ..++++.++..
T Consensus 48 ~~eL~~~a~~~al~~agl~~~d~~ID~vi~G~~~~~~~~~~~~~a~~~~~~~gl~~~~~gl~~~p~~~V~~~caSG~~Ai 127 (438)
T PTZ00455 48 LEELLATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQGHLGPAAVGSLGQSGASNALLYKPAMRVEGACASGGLAV 127 (438)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCcCEEEEEeccccccccccchHHHHHHhccCcccccccCCCceeEEECcCHHHHHHH
Confidence 3566699999999999999999 99999886541 13355667777666554 35666666543
Q ss_pred ----HHHhcCCCCeEEEEeecCCCC
Q 043382 160 ----QSAQVQPNSYTLVVSTENITL 180 (329)
Q Consensus 160 ----~lL~a~~~~~aLVVs~E~~S~ 180 (329)
..|++|..+.+||++.|..|.
T Consensus 128 ~~A~~~I~sG~~dvvlv~G~E~ms~ 152 (438)
T PTZ00455 128 QSAWEALLAGTSDIALVVGVEVQTT 152 (438)
T ss_pred HHHHHHHHCCCCCEEEEEEEeeccc
Confidence 788999999999999999884
No 92
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=97.44 E-value=0.00033 Score=69.56 Aligned_cols=82 Identities=9% Similarity=0.033 Sum_probs=64.9
Q ss_pred chHHHHHHHHHHHHh-cCCCCCCcCEEEEeccCC-CC-CCchHHHHHHHcCCCCCcceecccch------------HHHh
Q 043382 99 TDDVIIGAIDERLAK-TGFKHKDIGILVVNSSLF-NP-TPSLSAFIVNHYKLRSNILSYNLGAL------------QSAQ 163 (329)
Q Consensus 99 a~~l~~~Aa~~aL~k-agv~p~dId~LVv~ss~~-~~-~Ps~aa~I~~~Lglr~~v~~~dl~g~------------~lL~ 163 (329)
+++|+.+|++++|++ +|++|+|||.+|+.+... .. .+..+..+.-..|++..++++.++.. +.++
T Consensus 25 ~~~L~~~a~~~al~~~agl~~~~Id~v~~G~~~~~~~~g~~~ar~~~~~~g~~~~~p~~tV~~~CaSG~~Ai~~Aa~~I~ 104 (385)
T TIGR02445 25 AEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTLEQGFNIARNAALLAQIPHTSAAVTVNRLCGSSMQALHDAARAIM 104 (385)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHcCEEEEecccccccccchHHHHHHHHCCCCCCcchhhhhhhhHHHHHHHHHHHHHHH
Confidence 346669999999997 599999999999997652 22 23456666667888877877777665 7789
Q ss_pred cCCCCeEEEEeecCCCC
Q 043382 164 VQPNSYTLVVSTENITL 180 (329)
Q Consensus 164 a~~~~~aLVVs~E~~S~ 180 (329)
+|..+.+|+++.|.+|.
T Consensus 105 sG~~d~vlagG~E~ms~ 121 (385)
T TIGR02445 105 TGDADVCLVGGVEHMGH 121 (385)
T ss_pred CCCCCEEEEeeehhccc
Confidence 99999999999999883
No 93
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=97.42 E-value=0.00054 Score=70.34 Aligned_cols=80 Identities=15% Similarity=0.131 Sum_probs=59.7
Q ss_pred hHHHHHHHHHHHHhcCCC--CCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCccee-cccch----------HHHhcCC
Q 043382 100 DDVIIGAIDERLAKTGFK--HKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSY-NLGAL----------QSAQVQP 166 (329)
Q Consensus 100 ~~l~~~Aa~~aL~kagv~--p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~-dl~g~----------~lL~a~~ 166 (329)
.+|+.+|+++||+++|++ ++|||.+++.+............+++++|+.+....+ ..+|. ..|++|.
T Consensus 28 ~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~~~~~~~~~la~~lGl~p~~~~~~~~GG~s~~~~v~~Aa~~IasG~ 107 (498)
T PRK08257 28 VDLMAAAARAAAADAGADAVLEAIDSVAVVNQLSWRYRDPPGLLAERLGADPARTVYSPVGGNSPQRLVNEAALRIAAGE 107 (498)
T ss_pred HHHHHHHHHHHHHhcCCCcCHHHCCEEEEeccccccccCHHHHHHHHcCCCCcceeEecCCCHHHHHHHHHHHHHHHCCC
Confidence 466799999999999999 9999999876443212223457899999997422222 23331 6789999
Q ss_pred CCeEEEEeecCCC
Q 043382 167 NSYTLVVSTENIT 179 (329)
Q Consensus 167 ~~~aLVVs~E~~S 179 (329)
.+.|||+++|..+
T Consensus 108 advVLv~G~E~~~ 120 (498)
T PRK08257 108 ADVALVAGAEAQS 120 (498)
T ss_pred CCEEEEeeeeecc
Confidence 9999999999865
No 94
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=97.39 E-value=0.00055 Score=68.96 Aligned_cols=82 Identities=15% Similarity=0.179 Sum_probs=62.7
Q ss_pred chHHHHHHHHHHHHhcCCCCCCcCEEEEeccCC-CCCCchHHHHHHHcCCCCCcceecccch------------HHHhcC
Q 043382 99 TDDVIIGAIDERLAKTGFKHKDIGILVVNSSLF-NPTPSLSAFIVNHYKLRSNILSYNLGAL------------QSAQVQ 165 (329)
Q Consensus 99 a~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~-~~~Ps~aa~I~~~Lglr~~v~~~dl~g~------------~lL~a~ 165 (329)
.++|+.+|++++|+++|++++|||.+|+.+... ...+..+..+.-..|++..+.++.++.+ ..|++|
T Consensus 31 ~~eL~~~a~~~al~~agl~~~~Id~vv~G~~~~~~~~~~~~r~~~l~~gl~~~~p~~~V~~~CaSG~~ai~~A~~~I~sG 110 (427)
T PRK09268 31 NQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHSRDFNLTRECVLGSALSPYTPAYDLQQACGTGLEAAILVANKIALG 110 (427)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCccccHHHHHHHHcCCCCCCceeeeechhhHHHHHHHHHHHHHHCC
Confidence 356669999999999999999999999997653 2124455555555566545666666554 779999
Q ss_pred CCCeEEEEeecCCCC
Q 043382 166 PNSYTLVVSTENITL 180 (329)
Q Consensus 166 ~~~~aLVVs~E~~S~ 180 (329)
..+.+||++.|.+|.
T Consensus 111 ~~d~vlvgG~E~ms~ 125 (427)
T PRK09268 111 QIDSGIAGGVDTTSD 125 (427)
T ss_pred CCCEEEEeeEEccCC
Confidence 999999999999883
No 95
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=97.34 E-value=0.00057 Score=67.64 Aligned_cols=80 Identities=9% Similarity=0.092 Sum_probs=58.3
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcCEEEEeccCC-CC-CCchHHHHHHHcCCCCCcceeccc--ch----------HHHhcC
Q 043382 100 DDVIIGAIDERLAKTGFKHKDIGILVVNSSLF-NP-TPSLSAFIVNHYKLRSNILSYNLG--AL----------QSAQVQ 165 (329)
Q Consensus 100 ~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~-~~-~Ps~aa~I~~~Lglr~~v~~~dl~--g~----------~lL~a~ 165 (329)
.+++.+|++++|+++|++++|||.+|+.+... .. .+..+..+.-..|++..+.++.++ +. +.|++|
T Consensus 27 ~~L~~~a~~~al~dagl~~~~ID~vv~g~~~~~~~~~~~~~~~~~l~~gl~~~~p~~~v~~acaSg~~Av~~Aa~~I~sG 106 (382)
T PRK07801 27 ADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAGNIARTSWLAAGLPEEVPGVTVDRQCGSSQQAIHFAAQAVMSG 106 (382)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcCEEEEEeeccCCcccccHHHHHHHHcCCCCCCceeeecchhhhHHHHHHHHHHHHHCC
Confidence 45669999999999999999999999876421 11 122333333357775456666663 33 788999
Q ss_pred CCCeEEEEeecCCC
Q 043382 166 PNSYTLVVSTENIT 179 (329)
Q Consensus 166 ~~~~aLVVs~E~~S 179 (329)
..+.+||++.|.+|
T Consensus 107 ~~d~vLv~G~e~ms 120 (382)
T PRK07801 107 TQDLVVAGGVQNMS 120 (382)
T ss_pred CCCEEEEcchhhhc
Confidence 99999999999775
No 96
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=97.28 E-value=0.00064 Score=67.64 Aligned_cols=76 Identities=13% Similarity=0.016 Sum_probs=56.4
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCcceecccc--h----------HHHhcCCC
Q 043382 100 DDVIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSYNLGA--L----------QSAQVQPN 167 (329)
Q Consensus 100 ~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~dl~g--~----------~lL~a~~~ 167 (329)
.+|+.+|+++||+++|++++|||.+++++... +.....+++.+|++ ..+..++.. . ..|++|..
T Consensus 26 ~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~~---~~~~~~~~~~lGl~-~~~~~~v~~gg~s~~~a~~~A~~~I~sG~~ 101 (388)
T PRK08142 26 AQLHAEVAKGALADAGLSLADVDGYFCAGDAP---GLGPASMVDYLGLK-LRHVDSTETGGSSYLAHVGHAAQAIAAGKC 101 (388)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCC---CccHHHHHHhCCCC-CeeeccccCCcHHHHHHHHHHHHHHHcCCC
Confidence 45669999999999999999999987632221 11124599999996 345555433 3 66889999
Q ss_pred CeEEEEeecCCC
Q 043382 168 SYTLVVSTENIT 179 (329)
Q Consensus 168 ~~aLVVs~E~~S 179 (329)
+.||||+.|..+
T Consensus 102 d~vLvvg~e~~~ 113 (388)
T PRK08142 102 SVALITLAGRPR 113 (388)
T ss_pred CEEEEEeeeecc
Confidence 999999999854
No 97
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=97.22 E-value=0.0013 Score=66.05 Aligned_cols=82 Identities=9% Similarity=0.080 Sum_probs=71.1
Q ss_pred chHHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCC--CCchHHHHHHHcCCCCCcceecccch------------HHHhc
Q 043382 99 TDDVIIGAIDERLAKTGFKHKDIGILVVNSSLFNP--TPSLSAFIVNHYKLRSNILSYNLGAL------------QSAQV 164 (329)
Q Consensus 99 a~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~--~Ps~aa~I~~~Lglr~~v~~~dl~g~------------~lL~a 164 (329)
+++|+..+++.+++++|++|++||-||+.|..... .+..+-+++-+-|++.++.++-|+-. +.|++
T Consensus 29 ~~~L~~~~~~~~l~r~~i~~~~id~vi~G~~~~~g~~g~n~aR~~al~aglp~~vp~~tvnr~C~Sgl~ai~~aa~~I~~ 108 (417)
T PRK06025 29 PQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGYDIKASGVTLDRFCGGGITSVNLAAAQIMS 108 (417)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHCCEEEEEcCCCcCcccCcHHHHHHHhCCCCCCCCeeeeccccchHHHHHHHHHHHHHc
Confidence 45566999999999999999999999999887432 47888999999999988888877754 78999
Q ss_pred CCCCeEEEEeecCCCC
Q 043382 165 QPNSYTLVVSTENITL 180 (329)
Q Consensus 165 ~~~~~aLVVs~E~~S~ 180 (329)
|..+.+|+.+.|.+|.
T Consensus 109 G~~~~~laGG~EsmS~ 124 (417)
T PRK06025 109 GMEDLVIAGGTEMMSY 124 (417)
T ss_pred CCCCEEEEeeeeccCC
Confidence 9999999999999994
No 98
>PRK07937 lipid-transfer protein; Provisional
Probab=97.05 E-value=0.002 Score=63.34 Aligned_cols=79 Identities=15% Similarity=0.098 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCEEEEeccC-CCCCCchHHHHHHHcCCCCCcceeccc--ch-------HHHhcCCCCeE
Q 043382 101 DVIIGAIDERLAKTGFKHKDIGILVVNSSL-FNPTPSLSAFIVNHYKLRSNILSYNLG--AL-------QSAQVQPNSYT 170 (329)
Q Consensus 101 ~l~~~Aa~~aL~kagv~p~dId~LVv~ss~-~~~~Ps~aa~I~~~Lglr~~v~~~dl~--g~-------~lL~a~~~~~a 170 (329)
+++.+|+++||+++|++++|||.++..++. +.........+...+|+........+. |. ..+++|..+.+
T Consensus 26 el~~eA~~~Al~DAgl~~~dID~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~v~~~g~~a~~~A~~aI~sG~~d~V 105 (352)
T PRK07937 26 EMLMPCFAELYAELGITKSDIGFWCSGSSDYLAGRAFSFISAIDSIGAVPPINESHVEMDAAWALYEAWVKLLTGEVDTA 105 (352)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEccccccccccchhhHHhhccCCCCCceEEecCcHHHHHHHHHHHHhcCCCCEE
Confidence 455999999999999999999988644332 111111223466778885334444432 22 78999999999
Q ss_pred EEEeecCCC
Q 043382 171 LVVSTENIT 179 (329)
Q Consensus 171 LVVs~E~~S 179 (329)
||++.|..+
T Consensus 106 Lv~g~~k~~ 114 (352)
T PRK07937 106 LVYGFGKSS 114 (352)
T ss_pred EEEEecccC
Confidence 999999765
No 99
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=97.05 E-value=0.0025 Score=63.49 Aligned_cols=80 Identities=6% Similarity=0.059 Sum_probs=56.7
Q ss_pred hHHHHHHHHHHHHhcC-CCC-CCcCEEEEeccC-CCCCCchHHHHHHHcCCCCCcceecccch---------HHHhcCCC
Q 043382 100 DDVIIGAIDERLAKTG-FKH-KDIGILVVNSSL-FNPTPSLSAFIVNHYKLRSNILSYNLGAL---------QSAQVQPN 167 (329)
Q Consensus 100 ~~l~~~Aa~~aL~kag-v~p-~dId~LVv~ss~-~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~---------~lL~a~~~ 167 (329)
.+++.+|+++||+++| +++ +|||.+++++.. +....-....++..+|+.. ...+.+.+. ..+++|..
T Consensus 26 ~eL~~eA~~~Al~DAG~l~~~~dId~~~~~~~~~~~~~~~~~~~~~~~lg~~~-~~~~~v~~sg~~a~~~A~~aV~sG~~ 104 (385)
T PRK06066 26 REMMFEAASRAYKDAGNINPRRDVDSFISCQEDFWEGIAIADEFAPDQIGGAM-RPTMTVAGDGLQGLAHAVMHINSGLA 104 (385)
T ss_pred HHHHHHHHHHHHHhcCCCCChhcCCEEEEecCcccCcccccchhHHHHcccCC-CCeEEEeCcHHHHHHHHHHHHHcCCC
Confidence 3555999999999999 997 799999885432 2112223345778999952 333333322 77899999
Q ss_pred CeEEEEeecCCCC
Q 043382 168 SYTLVVSTENITL 180 (329)
Q Consensus 168 ~~aLVVs~E~~S~ 180 (329)
+.+||++.|..+.
T Consensus 105 d~vLv~g~~~~~~ 117 (385)
T PRK06066 105 NVVVVEAHSKPSD 117 (385)
T ss_pred CEEEEEEEeeccC
Confidence 9999999997653
No 100
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=97.04 E-value=0.0011 Score=65.62 Aligned_cols=80 Identities=19% Similarity=0.206 Sum_probs=60.0
Q ss_pred chHHHHHHHHHHHHhcCCCCCCcCE----EEEeccC-C-------------------CCCCchHHHHHHHcCCCCCccee
Q 043382 99 TDDVIIGAIDERLAKTGFKHKDIGI----LVVNSSL-F-------------------NPTPSLSAFIVNHYKLRSNILSY 154 (329)
Q Consensus 99 a~~l~~~Aa~~aL~kagv~p~dId~----LVv~ss~-~-------------------~~~Ps~aa~I~~~Lglr~~v~~~ 154 (329)
...++..|+++||+++|++++++|. +++.++. + ...+..+..|+.++|++..+..+
T Consensus 87 ~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl~g~~~~v 166 (421)
T cd00833 87 QQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDLRGPSLTV 166 (421)
T ss_pred HHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCCCCCceee
Confidence 4688999999999999999888774 5555542 1 12255778899999997544444
Q ss_pred cccch----------HHHhcCCCCeEEEEeecCC
Q 043382 155 NLGAL----------QSAQVQPNSYTLVVSTENI 178 (329)
Q Consensus 155 dl~g~----------~lL~a~~~~~aLVVs~E~~ 178 (329)
+-.+. ++|++|..+.+||+++|..
T Consensus 167 ~~acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~ 200 (421)
T cd00833 167 DTACSSSLVALHLACQSLRSGECDLALVGGVNLI 200 (421)
T ss_pred ccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeecc
Confidence 33332 7899999999999999975
No 101
>PRK07855 lipid-transfer protein; Provisional
Probab=96.94 E-value=0.0024 Score=63.43 Aligned_cols=72 Identities=11% Similarity=0.067 Sum_probs=53.9
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCccee--cccch----------HHHhcCCC
Q 043382 100 DDVIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSY--NLGAL----------QSAQVQPN 167 (329)
Q Consensus 100 ~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~--dl~g~----------~lL~a~~~ 167 (329)
.+|+.+|+++||+++|++++|||.+++++.. ..+. ..+++.+|+++..... +.+|. ..+++|..
T Consensus 25 ~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~--~~~~--~~l~~~lGl~~~~~~~~v~~gg~sg~~~~~~A~~~I~sG~~ 100 (386)
T PRK07855 25 LRLACEAVLAALDDAGLAPSDVDGLVTFTMD--TNPE--IAVARALGIGELKFFSRIHYGGGAACATVQQAAMAVATGVA 100 (386)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCc--cccH--HHHHHHCCCCCCcceeeecCCcHHHHHHHHHHHHHHHCCCC
Confidence 4566999999999999999999999875432 2222 4689999997412323 33333 77899999
Q ss_pred CeEEEEee
Q 043382 168 SYTLVVST 175 (329)
Q Consensus 168 ~~aLVVs~ 175 (329)
+.|||+++
T Consensus 101 d~vLv~g~ 108 (386)
T PRK07855 101 DVVVCYRA 108 (386)
T ss_pred CEEEEEee
Confidence 99999998
No 102
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=96.39 E-value=0.011 Score=58.27 Aligned_cols=77 Identities=8% Similarity=0.041 Sum_probs=61.3
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCcceecccch------------HHHhcCCC
Q 043382 100 DDVIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSYNLGAL------------QSAQVQPN 167 (329)
Q Consensus 100 ~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~------------~lL~a~~~ 167 (329)
++|+..|++++++ |++ +|||.+|+.+.... .+..+..+....|++.++.++.++.+ +.+++|..
T Consensus 26 ~~L~~~a~~~~~~--gi~-~~Id~vi~G~~~~~-~~~~~r~~~~~~Gl~~~~p~~tV~~~CaSG~~Ai~~a~~~I~sG~~ 101 (361)
T PRK06690 26 QQLAAPLLTFLSK--GME-REIDDVILGNVVGP-GGNVARLSALEAGLGLHIPGVTIDRQCGAGLEAIRTACHFIQGGAG 101 (361)
T ss_pred HHHHHHHHHHHHc--cch-hhcCEEEEEecCCC-cchHHHHHHHHcCCCCCCCceehhhhhhHHHHHHHHHHHHHHCCCC
Confidence 5566999999865 896 89999999876522 24445568899999866888877655 78999999
Q ss_pred CeEEEEeecCCCC
Q 043382 168 SYTLVVSTENITL 180 (329)
Q Consensus 168 ~~aLVVs~E~~S~ 180 (329)
+.+|+++.|.+|.
T Consensus 102 d~~l~gG~E~ms~ 114 (361)
T PRK06690 102 KCYIAGGVESTST 114 (361)
T ss_pred CEEEEeccccccC
Confidence 9999999999984
No 103
>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways. The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. Acyl-[ACP] + malonyl-[ACP] = 3-oxoacyl-[ACP] + CO(2) + [ACP] The oxoacyl-ACP formed by this reaction subsequently enters the elongation cycle, where the acyl chain is progressively lengthened by the combined activities of several enzymes. The enzymes studied so far are homodimers, where each monomer consists of two domains (N-terminal and C-terminal) which are similar in structure, but not in sequence [, ]. This entry represents a conserved region within the N-terminal domain.; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process; PDB: 1ZOW_C 1UB7_B 3IL7_A 3IL3_A 2X3E_B 4DFE_C 3LED_B 3ROW_B 3S23_A 3S1Z_A ....
Probab=96.28 E-value=0.0027 Score=48.91 Aligned_cols=35 Identities=11% Similarity=0.161 Sum_probs=27.8
Q ss_pred HHHhcCCCCeEEEEeecCCCC--C-------ccccCCCccc-ccc
Q 043382 160 QSAQVQPNSYTLVVSTENITL--G-------LYTGNDRSIL-RTT 194 (329)
Q Consensus 160 ~lL~a~~~~~aLVVs~E~~S~--~-------~~~Gd~~sal-l~~ 194 (329)
.+++++..++||||++|+.+. + ++|||+++++ |+.
T Consensus 19 ~~i~~g~~~~~Lvv~~d~~s~~~~~~~~~~~~~~gDgAaA~vl~~ 63 (80)
T PF08545_consen 19 ALIASGRAKNALVVGGDRLSRIVDRTDRQTAFIFGDGAAAVVLSR 63 (80)
T ss_dssp HHHHTTS-SEEEEEEEEEGGGGSHTTHHHHHTTB-EEEEEEEEEE
T ss_pred HHHhhccCCEEEEEeeccccccccccccCcceeecchheEEEEEe
Confidence 889999999999999999985 2 2799999877 664
No 104
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=96.15 E-value=0.01 Score=59.59 Aligned_cols=75 Identities=16% Similarity=0.184 Sum_probs=54.1
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcC------------------EEEEecc---------------C-C-------CCCCchH
Q 043382 100 DDVIIGAIDERLAKTGFKHKDIG------------------ILVVNSS---------------L-F-------NPTPSLS 138 (329)
Q Consensus 100 ~~l~~~Aa~~aL~kagv~p~dId------------------~LVv~ss---------------~-~-------~~~Ps~a 138 (329)
..++..|++++|+++|+++++++ .++..+. . . ...|+.+
T Consensus 76 ~~~~~~aa~~Al~dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 155 (425)
T PRK06501 76 EALARLAAEEALAQAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAPSYDRLLRAARGGRFDALHERFQFGSIA 155 (425)
T ss_pred HHHHHHHHHHHHHHcCCCccccccceeeccccccCCCCceEEEEEecCCccHHHHHHHHhhcCcccCChhhhhhcccHHH
Confidence 45678999999999999654432 1112111 0 1 1457899
Q ss_pred HHHHHHcCCCCCcceecccch------------HHHhcCCCCeEEEEeec
Q 043382 139 AFIVNHYKLRSNILSYNLGAL------------QSAQVQPNSYTLVVSTE 176 (329)
Q Consensus 139 a~I~~~Lglr~~v~~~dl~g~------------~lL~a~~~~~aLVVs~E 176 (329)
..|+.++|++.. +++++.+ ++|+++..+.+||+++|
T Consensus 156 ~~i~~~~gl~G~--~~~i~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d 203 (425)
T PRK06501 156 DRLADRFGTRGL--PISLSTACASGATAIQLGVEAIRRGETDRALCIATD 203 (425)
T ss_pred HHHHHHhCCCCC--ceeecCccHHHHHHHHHHHHHHHcCCCCEEEEeeec
Confidence 999999999754 4555554 88999999999999999
No 105
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=96.08 E-value=0.021 Score=56.50 Aligned_cols=82 Identities=15% Similarity=0.067 Sum_probs=57.6
Q ss_pred hchHHHHHHHHHHHHhcCCCCCC-cC----EEEEeccCC-----------------------CCC--CchHHHHHHHcCC
Q 043382 98 ETDDVIIGAIDERLAKTGFKHKD-IG----ILVVNSSLF-----------------------NPT--PSLSAFIVNHYKL 147 (329)
Q Consensus 98 ea~~l~~~Aa~~aL~kagv~p~d-Id----~LVv~ss~~-----------------------~~~--Ps~aa~I~~~Lgl 147 (329)
....++..|+++||+++|+++++ ++ .+++.++.. ... ...+..|...+|+
T Consensus 71 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T cd00828 71 RTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLLS 150 (407)
T ss_pred HHHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccchHHHHHHHHhCc
Confidence 34678899999999999998765 33 233333210 111 5677889999999
Q ss_pred -CCCcceecccch----------HHHhcCCCCeEEEEeecCCC
Q 043382 148 -RSNILSYNLGAL----------QSAQVQPNSYTLVVSTENIT 179 (329)
Q Consensus 148 -r~~v~~~dl~g~----------~lL~a~~~~~aLVVs~E~~S 179 (329)
+..+.+++-.+. ++|++|..+.+||.++|..+
T Consensus 151 ~~Gp~~tv~~aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~ 193 (407)
T cd00828 151 SHGPIKTPVGACATALEALDLAVEAIRSGKADIVVVGGVEDPL 193 (407)
T ss_pred CCCCCcCcccHHHHHHHHHHHHHHHHHcCCCCEEEEccccccC
Confidence 654444433332 78999999999999999864
No 106
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=95.72 E-value=0.036 Score=54.67 Aligned_cols=79 Identities=10% Similarity=0.053 Sum_probs=58.5
Q ss_pred chHHHHHHHHHHHHhcCCCCCCcCE----EEEeccCC-C-------------------------CCC-chHHHHHHHcCC
Q 043382 99 TDDVIIGAIDERLAKTGFKHKDIGI----LVVNSSLF-N-------------------------PTP-SLSAFIVNHYKL 147 (329)
Q Consensus 99 a~~l~~~Aa~~aL~kagv~p~dId~----LVv~ss~~-~-------------------------~~P-s~aa~I~~~Lgl 147 (329)
...++..|++++|+++|+++++||. +++.++.. . ..+ ..+..|...+|+
T Consensus 71 ~~~l~~~aa~~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T TIGR03150 71 FIQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGA 150 (407)
T ss_pred HHHHHHHHHHHHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHhCC
Confidence 3678899999999999999999886 55554321 0 111 145568889999
Q ss_pred CCCcceecccch----------HHHhcCCCCeEEEEeecC
Q 043382 148 RSNILSYNLGAL----------QSAQVQPNSYTLVVSTEN 177 (329)
Q Consensus 148 r~~v~~~dl~g~----------~lL~a~~~~~aLVVs~E~ 177 (329)
+....+++-.+. +.|++|..+.+||+++|.
T Consensus 151 ~g~~~~v~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~ 190 (407)
T TIGR03150 151 KGPNHAVVTACATGTHAIGDAFRLIQRGDADVMIAGGAEA 190 (407)
T ss_pred CCcccccccHHHHHHHHHHHHHHHHhcCCCCEEEEecccC
Confidence 765555554443 789999999999999996
No 107
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=95.58 E-value=0.057 Score=53.60 Aligned_cols=80 Identities=9% Similarity=0.024 Sum_probs=60.5
Q ss_pred chHHHHHHHHHHHHhcCCCCCCcC----EEEEeccCC--------------------------CCCCc-hHHHHHHHcCC
Q 043382 99 TDDVIIGAIDERLAKTGFKHKDIG----ILVVNSSLF--------------------------NPTPS-LSAFIVNHYKL 147 (329)
Q Consensus 99 a~~l~~~Aa~~aL~kagv~p~dId----~LVv~ss~~--------------------------~~~Ps-~aa~I~~~Lgl 147 (329)
...++..|+.+||+++|++++++| .+++.++.. ...++ .+..|...+|+
T Consensus 72 ~~~l~~~aa~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 151 (411)
T PRK07314 72 FIQYGIAAAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRYGA 151 (411)
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHhCC
Confidence 357889999999999999999888 466665421 01122 55679999999
Q ss_pred CCCcceecccch----------HHHhcCCCCeEEEEeecCC
Q 043382 148 RSNILSYNLGAL----------QSAQVQPNSYTLVVSTENI 178 (329)
Q Consensus 148 r~~v~~~dl~g~----------~lL~a~~~~~aLVVs~E~~ 178 (329)
+....+++-.+. ++|++|..+.+||.++|..
T Consensus 152 ~Gp~~tv~~acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~ 192 (411)
T PRK07314 152 KGPNHSIVTACATGAHAIGDAARLIAYGDADVMVAGGAEAA 192 (411)
T ss_pred CCccccchhhhHHHHHHHHHHHHHHhcCCCCEEEEeeeccc
Confidence 876666665543 7899999999999999864
No 108
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=94.49 E-value=0.12 Score=51.55 Aligned_cols=79 Identities=19% Similarity=0.179 Sum_probs=57.8
Q ss_pred chHHHHHHHHHHHHhcCCCCCCcCE----EEEeccCC--------------------------CCCC-chHHHHHHHcCC
Q 043382 99 TDDVIIGAIDERLAKTGFKHKDIGI----LVVNSSLF--------------------------NPTP-SLSAFIVNHYKL 147 (329)
Q Consensus 99 a~~l~~~Aa~~aL~kagv~p~dId~----LVv~ss~~--------------------------~~~P-s~aa~I~~~Lgl 147 (329)
...++..|+.+||+++|+++++++. +++.++.. ...| ..+..|...+|+
T Consensus 72 ~~~l~~~Aa~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 151 (406)
T PRK08439 72 FIQLGLKAAREAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGL 151 (406)
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHHhCC
Confidence 4678899999999999999887763 44433211 1112 467789999999
Q ss_pred CCCcceecccch----------HHHhcCCCCeEEEEeecC
Q 043382 148 RSNILSYNLGAL----------QSAQVQPNSYTLVVSTEN 177 (329)
Q Consensus 148 r~~v~~~dl~g~----------~lL~a~~~~~aLVVs~E~ 177 (329)
+....+++-.+. ++|++|..+.+||+++|.
T Consensus 152 ~Gp~~~~~~acas~~~Al~~A~~~i~~G~~d~~lv~g~d~ 191 (406)
T PRK08439 152 KGPNLSSVTACAAGTHAIIEAVKTIMLGGADKMLVVGAES 191 (406)
T ss_pred CCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecchh
Confidence 965555543333 889999999999999996
No 109
>PF08540 HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A synthase C terminal; InterPro: IPR013746 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the C-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1TXT_D 1TVZ_A 1X9E_B 2HDB_B 3V4X_A 3V4N_C 2P8U_A 2FA0_A 2F9A_A 2F82_A ....
Probab=94.12 E-value=0.036 Score=53.00 Aligned_cols=53 Identities=21% Similarity=0.202 Sum_probs=37.3
Q ss_pred ccccccccCCCCcCcHHHHHHHHH--HhCCCCCCCEEEEEeechhhhhhheeeee
Q 043382 243 SRVTLYRFRNTSSSLVWYELAYAE--AKRRIPKGDRICQIGFGAGFNCNTVVWPV 295 (329)
Q Consensus 243 sr~tl~~~GNtsSaSi~~~La~~~--~kgrlk~GDrV~~iafGsGf~~~sav~r~ 295 (329)
+-..-.+.||+-++|++..|+-++ .++..-.|+||.+.++|||......-.+.
T Consensus 147 sl~~~~~vGN~YTaSly~~L~SlL~~~~~~~l~GkrI~~FSYGSG~~s~~fs~~v 201 (282)
T PF08540_consen 147 SLLYSRQVGNMYTASLYLGLASLLSSAEADDLAGKRIGMFSYGSGLASEFFSGRV 201 (282)
T ss_dssp HTHHHHHHB--GGGHHHHHHHHHHHHHHSCHHTT-EEEEEEEETTTEEEEEEEEE
T ss_pred HHHHHHHcCceehHHHHHHHHHHhhccCccccCCCEEEEEEecCCcceeEEEEEE
Confidence 334456899999999999999999 44555589999999999995444444433
No 110
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]
Probab=93.83 E-value=0.16 Score=50.71 Aligned_cols=81 Identities=11% Similarity=0.120 Sum_probs=62.6
Q ss_pred hHHHHHHHHHHHHhc--CCCCCCcCEEEEeccCC--CCCCchHHHHHHHcCCCCCcceecccch------------HHHh
Q 043382 100 DDVIIGAIDERLAKT--GFKHKDIGILVVNSSLF--NPTPSLSAFIVNHYKLRSNILSYNLGAL------------QSAQ 163 (329)
Q Consensus 100 ~~l~~~Aa~~aL~ka--gv~p~dId~LVv~ss~~--~~~Ps~aa~I~~~Lglr~~v~~~dl~g~------------~lL~ 163 (329)
+++.....+..+++. ++++.+||-+++.|... ...+..+..++...|++.+++.+.++.. ..|+
T Consensus 28 e~l~~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~g~~~~~~ar~~a~~aGl~~~~p~~~V~~~c~SG~~Av~~A~~~I~ 107 (392)
T COG0183 28 EALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGLPGSVPAVTVNRACASGLAAVRLAAQAIA 107 (392)
T ss_pred HHHHHHHHHHHhhhccccCCHHHhhhheeccccccccccccHHHHHHHHcCCCCCCCceEEeccchhHHHHHHHHHHHHH
Confidence 334455555555433 68888899999987764 4577888999999999966777777655 7789
Q ss_pred cCCCCeEEEEeecCCCC
Q 043382 164 VQPNSYTLVVSTENITL 180 (329)
Q Consensus 164 a~~~~~aLVVs~E~~S~ 180 (329)
+|..+.+|+++.|.+|.
T Consensus 108 sG~~dvvlagG~E~mS~ 124 (392)
T COG0183 108 SGEADVVLAGGVEKMSD 124 (392)
T ss_pred CCCCCEEEEEeeeeccC
Confidence 99999999999999994
No 111
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=93.47 E-value=0.28 Score=49.00 Aligned_cols=79 Identities=11% Similarity=0.082 Sum_probs=58.4
Q ss_pred chHHHHHHHHHHHHhcCCCCCCc-C----EEEEeccC-CC-------------------------CCC-chHHHHHHHcC
Q 043382 99 TDDVIIGAIDERLAKTGFKHKDI-G----ILVVNSSL-FN-------------------------PTP-SLSAFIVNHYK 146 (329)
Q Consensus 99 a~~l~~~Aa~~aL~kagv~p~dI-d----~LVv~ss~-~~-------------------------~~P-s~aa~I~~~Lg 146 (329)
...++..|++++|+++|++++++ + .+++.++. .. ..+ ..+..|...||
T Consensus 82 ~~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 161 (424)
T PRK06333 82 FILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRYG 161 (424)
T ss_pred HHHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHHHHHHhC
Confidence 46788999999999999988776 2 34554442 10 111 13667889999
Q ss_pred CCCCcceecccch----------HHHhcCCCCeEEEEeecC
Q 043382 147 LRSNILSYNLGAL----------QSAQVQPNSYTLVVSTEN 177 (329)
Q Consensus 147 lr~~v~~~dl~g~----------~lL~a~~~~~aLVVs~E~ 177 (329)
++..+.+++-.+. ++|++|..+.+||.++|.
T Consensus 162 l~Gp~~~v~~aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~ 202 (424)
T PRK06333 162 FKGPLGAPVTACAAGVQAIGDAARLIRSGEADVAVCGGTEA 202 (424)
T ss_pred CCCCCccccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecc
Confidence 9877777665554 789999999999999997
No 112
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=93.04 E-value=0.34 Score=48.42 Aligned_cols=77 Identities=17% Similarity=0.258 Sum_probs=55.8
Q ss_pred chHHHHHHHHHHHHhcCCC---CCCcCEEEEeccC----------------CCCCC---------chHHHHHHHcCCCCC
Q 043382 99 TDDVIIGAIDERLAKTGFK---HKDIGILVVNSSL----------------FNPTP---------SLSAFIVNHYKLRSN 150 (329)
Q Consensus 99 a~~l~~~Aa~~aL~kagv~---p~dId~LVv~ss~----------------~~~~P---------s~aa~I~~~Lglr~~ 150 (329)
...++..|++++|+++|++ +++|++++..+.. .+..| ..+..|+..||++.
T Consensus 80 ~~~lal~Aa~eAl~dAgl~~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~G- 158 (410)
T PRK07103 80 SAQAALAAAREAWRDAALGPVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGIRG- 158 (410)
T ss_pred HHHHHHHHHHHHHHhcCcCCCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhCCCC-
Confidence 3568899999999999986 5678777765421 11112 25667889999975
Q ss_pred cceecccch------------HHHhcCCCCeEEEEeecC
Q 043382 151 ILSYNLGAL------------QSAQVQPNSYTLVVSTEN 177 (329)
Q Consensus 151 v~~~dl~g~------------~lL~a~~~~~aLVVs~E~ 177 (329)
.++.++++ ++|+++..+.+||+++|.
T Consensus 159 -~~~tv~~acas~~~Al~~A~~~I~~G~~d~~lv~g~~~ 196 (410)
T PRK07103 159 -EGFTVGGASASGQLAVIQAARLVQSGSVDACIAVGALM 196 (410)
T ss_pred -CcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccc
Confidence 44555655 789999999999999863
No 113
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=92.95 E-value=0.36 Score=46.67 Aligned_cols=79 Identities=18% Similarity=0.212 Sum_probs=51.5
Q ss_pred HHhhch-HHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCcceecccch------------HH
Q 043382 95 AKKETD-DVIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSYNLGAL------------QS 161 (329)
Q Consensus 95 ~~~ea~-~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~------------~l 161 (329)
.+|.|| .|..+|++.+|+|++++++|||.++-.--....+ .++..++.|+++ =+.+-|+ -+
T Consensus 46 swEkAE~~m~~~A~~~al~Ka~l~~~dId~~~aGDLlnQ~i--~s~f~ar~l~iP----f~GlygACST~~e~l~laa~~ 119 (329)
T PF07451_consen 46 SWEKAESKMQKEAVELALKKAGLKKEDIDYLFAGDLLNQII--SSSFAARDLGIP----FLGLYGACSTMMESLALAAML 119 (329)
T ss_dssp SHHHHHHHHHHHHHHHHHHHTT--GGG-SEEEEEETTCCCC--HHHHHHHHHT------EEEB--CCCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHcCCCHHHCeEEEehhhhhhhH--HHHHHHHhcCCC----ccchhhHHHHHHHHHHHHHHH
Confidence 355564 7889999999999999999999998776555554 456888888886 4445554 45
Q ss_pred HhcCCCCeEEEEeecCCC
Q 043382 162 AQVQPNSYTLVVSTENIT 179 (329)
Q Consensus 162 L~a~~~~~aLVVs~E~~S 179 (329)
+..+-.+++|+.++--.+
T Consensus 120 vdgg~a~~vla~tSSH~~ 137 (329)
T PF07451_consen 120 VDGGFADYVLAATSSHFA 137 (329)
T ss_dssp HHTTS-SEEEEEEEE-CC
T ss_pred HhCCCcceEEEEeccccc
Confidence 666778888887665443
No 114
>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B ....
Probab=91.65 E-value=0.58 Score=42.82 Aligned_cols=82 Identities=20% Similarity=0.276 Sum_probs=58.4
Q ss_pred chHHHHHHHHHHHHhcCCCCCC------cCEEEEeccCCC-----------------C------CCc-hHHHHHHHcCCC
Q 043382 99 TDDVIIGAIDERLAKTGFKHKD------IGILVVNSSLFN-----------------P------TPS-LSAFIVNHYKLR 148 (329)
Q Consensus 99 a~~l~~~Aa~~aL~kagv~p~d------Id~LVv~ss~~~-----------------~------~Ps-~aa~I~~~Lglr 148 (329)
...++..|+.+||+++|+++++ +++++-.+..++ + .|+ .+..|+..+|++
T Consensus 87 ~~~~~l~aa~~Al~dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~ 166 (254)
T PF00109_consen 87 QSRLALAAAREALEDAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPNSAAGRIAILFGLR 166 (254)
T ss_dssp HHHHHHHHHHHHHHHHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTTHHHHHHHHHHTB-
T ss_pred hhhHHHHHhhhhcccccccccccccccceeeccccccccccccccccccccccccccccccCcccccccccchhhhcCCC
Confidence 4688899999999999998853 555554432210 1 222 577899999999
Q ss_pred CCcceecccch----------HHHhcCCCCeEEEEeec-CCCC
Q 043382 149 SNILSYNLGAL----------QSAQVQPNSYTLVVSTE-NITL 180 (329)
Q Consensus 149 ~~v~~~dl~g~----------~lL~a~~~~~aLVVs~E-~~S~ 180 (329)
....+++-.+. ++|++|..+.+||.++| .++.
T Consensus 167 G~~~tv~~acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~ 209 (254)
T PF00109_consen 167 GPSYTVSTACASGLAALEAAYRAIRSGEADVALVGGVDAPLSP 209 (254)
T ss_dssp SSEEEEE-GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--SSH
T ss_pred Cccccccccccccccccchhccccccccccccccccccccccc
Confidence 87777765444 78999999999999999 5553
No 115
>KOG2708 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=91.57 E-value=0.51 Score=44.06 Aligned_cols=119 Identities=18% Similarity=0.120 Sum_probs=72.7
Q ss_pred ceEec-cCCCCCCCCCchhHHHHHhhchHHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchH-HHHHHHcCCCCCc
Q 043382 74 NMTYG-PKSLMDNPAENRHMKEAKKETDDVIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLS-AFIVNHYKLRSNI 151 (329)
Q Consensus 74 ~R~~~-~~~~~~~pe~~~~ma~~~~ea~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~a-a~I~~~Lglr~~v 151 (329)
.++|+ ||+...+|. +-| +.-...+..-++++|++++++++|||++.+.-....-.|-.+ +.+++-+-+=-|.
T Consensus 29 R~TYitPPG~GFlP~---~TA---~HHr~~il~Lv~~al~ea~v~~~diD~icyTKGPGmgaPL~~vaivaRtlsllw~k 102 (336)
T KOG2708|consen 29 RHTYITPPGEGFLPR---DTA---RHHRAWILGLVKQALEEAGVTSDDIDCICYTKGPGMGAPLSVVAIVARTLSLLWNK 102 (336)
T ss_pred cccccCCCCCCCCcc---hhH---HHHHHHHHHHHHHHHHHcCCChhhCCEEEEcCCCCCCCchhhHHHHHHHHHHHhCC
Confidence 45566 666555551 111 112345567788999999999999999877666655555443 3445545442234
Q ss_pred ceecccch-------HHHhcCCCCeEEEEeecCCC------CCc-cccCCCcccccccccc
Q 043382 152 LSYNLGAL-------QSAQVQPNSYTLVVSTENIT------LGL-YTGNDRSILRTTAYFV 198 (329)
Q Consensus 152 ~~~dl~g~-------~lL~a~~~~~aLVVs~E~~S------~~~-~~Gd~~sall~~~~~~ 198 (329)
+-+.++.- .++....+-.+|-||+-+.. ..| +||.--...+.||++.
T Consensus 103 Plv~VNHCigHIEMGR~iTgA~nPvvLYvSGGNTQvIAYse~rYrIFGETlDIAvGNClDR 163 (336)
T KOG2708|consen 103 PLVGVNHCIGHIEMGREITGAQNPVVLYVSGGNTQVIAYSEKRYRIFGETLDIAVGNCLDR 163 (336)
T ss_pred CcccchhhhhhhhhcceeccCCCCEEEEEeCCceEEEEEccceeeeecceehhhhhhhHHH
Confidence 44433332 45544456778888888754 123 7887766668888844
No 116
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=91.57 E-value=0.28 Score=38.05 Aligned_cols=62 Identities=16% Similarity=0.283 Sum_probs=39.7
Q ss_pred HHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCcceecccch-------------HHHhcC---CCCeEEEEe
Q 043382 111 LAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSYNLGAL-------------QSAQVQ---PNSYTLVVS 174 (329)
Q Consensus 111 L~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~-------------~lL~a~---~~~~aLVVs 174 (329)
|+++|++++|||.+|..-. .......+.+++|++.+....++.-. ++++.+ +++++|+++
T Consensus 1 L~~~g~~~~did~~i~hq~----~~~~~~~~~~~lgi~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~Gd~vl~~~ 76 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQA----SKKILDSIAKRLGIPPERFPDNLAEYGNTGSASIPINLADALEEGRIKPGDRVLLVG 76 (90)
T ss_dssp HHHTT--GGGESEEEE-SS----SHHHHHHHHHHHTS-GGGBE-THHHH-B-GGGHHHHHHHHHHHTTSSCTTEEEEEEE
T ss_pred CccccCCHHHCCEEEeCCC----CHHHHHHHHHHcCCcHHHHHHHHhccCcchhhhHHHHHHHHHHcCCCCCCCEEEEEE
Confidence 6899999999999988643 34455669999999865333333211 566654 578899988
Q ss_pred ec
Q 043382 175 TE 176 (329)
Q Consensus 175 ~E 176 (329)
.-
T Consensus 77 ~G 78 (90)
T PF08541_consen 77 FG 78 (90)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 117
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=90.80 E-value=1.3 Score=44.49 Aligned_cols=80 Identities=10% Similarity=0.027 Sum_probs=57.6
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcC----EEEEeccC-C-----------------C--------CCC-chHHHHHHHcCCC
Q 043382 100 DDVIIGAIDERLAKTGFKHKDIG----ILVVNSSL-F-----------------N--------PTP-SLSAFIVNHYKLR 148 (329)
Q Consensus 100 ~~l~~~Aa~~aL~kagv~p~dId----~LVv~ss~-~-----------------~--------~~P-s~aa~I~~~Lglr 148 (329)
..++..|+.+||+++|+++++.+ .+++.++. . . ..| ..+..|...+|++
T Consensus 75 ~~~~l~a~~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~gl~ 154 (414)
T PRK08722 75 IQYGIAAGIQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLR 154 (414)
T ss_pred HHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHHhCCC
Confidence 46788999999999999754332 24444432 1 0 112 3677888999999
Q ss_pred CCcceecccch----------HHHhcCCCCeEEEEeecCCC
Q 043382 149 SNILSYNLGAL----------QSAQVQPNSYTLVVSTENIT 179 (329)
Q Consensus 149 ~~v~~~dl~g~----------~lL~a~~~~~aLVVs~E~~S 179 (329)
+...+++-.+. ++|+.+..+.+||.++|...
T Consensus 155 Gp~~ti~~aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~ 195 (414)
T PRK08722 155 GPNIAISTACTTGLHNIGHAARMIAYGDADAMVAGGAEKAS 195 (414)
T ss_pred CCccccccccHHHHHHHHHHHHHHHcCCCCEEEEecccccC
Confidence 77777765554 88999999999999999753
No 118
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=90.59 E-value=0.81 Score=45.87 Aligned_cols=79 Identities=13% Similarity=0.056 Sum_probs=56.0
Q ss_pred chHHHHHHHHHHHHhcCCC-CCCcCE----EEEeccCCCC--------------------------CC-chHHHHHHHcC
Q 043382 99 TDDVIIGAIDERLAKTGFK-HKDIGI----LVVNSSLFNP--------------------------TP-SLSAFIVNHYK 146 (329)
Q Consensus 99 a~~l~~~Aa~~aL~kagv~-p~dId~----LVv~ss~~~~--------------------------~P-s~aa~I~~~Lg 146 (329)
...++..|+.+||+++|++ +++++. +++.++.... ++ ..+..|...+|
T Consensus 77 ~~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~ 156 (421)
T PTZ00050 77 ATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIKHK 156 (421)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHHHhC
Confidence 3577899999999999998 666543 3333322110 01 24567888899
Q ss_pred CCCCcceecccch----------HHHhcCCCCeEEEEeecC
Q 043382 147 LRSNILSYNLGAL----------QSAQVQPNSYTLVVSTEN 177 (329)
Q Consensus 147 lr~~v~~~dl~g~----------~lL~a~~~~~aLVVs~E~ 177 (329)
++..+.+++-.+. ++|++|..+.+||.++|.
T Consensus 157 l~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~ 197 (421)
T PTZ00050 157 LKGPSGSAVTACATGAHCIGEAFRWIKYGEADIMICGGTEA 197 (421)
T ss_pred CCCcccccccHhHHHHHHHHHHHHHHHcCCCCEEEECcccc
Confidence 9876666655554 789999999999999986
No 119
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=89.25 E-value=0.83 Score=43.56 Aligned_cols=73 Identities=11% Similarity=0.141 Sum_probs=50.7
Q ss_pred chHHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCcceec---ccch----------HHHhcC
Q 043382 99 TDDVIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSYN---LGAL----------QSAQVQ 165 (329)
Q Consensus 99 a~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~d---l~g~----------~lL~a~ 165 (329)
+.....++++++|+++|++++|||.+++.- +.+..-..+.++||++.+-...+ .+++ .+++.+
T Consensus 223 ~~~~~~~~i~~~L~~~g~~~~did~~~~h~----~~~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~sas~~~~L~~~~~~g 298 (325)
T PRK12879 223 AVRTMPKGARQVLEKAGLTKDDIDWVIPHQ----ANLRIIESLCEKLGIPMEKTLVSVEYYGNTSAATIPLALDLALEQG 298 (325)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHcCCCHHHhhhhHhhhCchHHHHHHHHHHHHHHcC
Confidence 344556788999999999999999998763 44556678999999974322112 2222 556554
Q ss_pred ---CCCeEEEEee
Q 043382 166 ---PNSYTLVVST 175 (329)
Q Consensus 166 ---~~~~aLVVs~ 175 (329)
+++++|+++.
T Consensus 299 ~~~~Gd~vll~~~ 311 (325)
T PRK12879 299 KIKPGDTLLLYGF 311 (325)
T ss_pred CCCCCCEEEEEEE
Confidence 4678888874
No 120
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=88.79 E-value=2.2 Score=42.81 Aligned_cols=79 Identities=14% Similarity=0.239 Sum_probs=56.1
Q ss_pred hHHHHHHHHHHHHhcCCCCCC-----cCEEEEeccC-C--------------------------CCCC-chHHHHHHHcC
Q 043382 100 DDVIIGAIDERLAKTGFKHKD-----IGILVVNSSL-F--------------------------NPTP-SLSAFIVNHYK 146 (329)
Q Consensus 100 ~~l~~~Aa~~aL~kagv~p~d-----Id~LVv~ss~-~--------------------------~~~P-s~aa~I~~~Lg 146 (329)
..++..|++++|+++|+++++ +++++ .++. . ...| ..+..|...||
T Consensus 72 ~~~a~~aa~~Al~dAGl~~~~~~~~rvGv~~-gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~~ 150 (406)
T PRK07967 72 SAYAYLAMEQAIADAGLSEEQVSNPRTGLIA-GSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFK 150 (406)
T ss_pred HHHHHHHHHHHHHHcCCCCccCCCCCEEEEE-ecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHHC
Confidence 467789999999999987543 44444 3321 1 0111 26777999999
Q ss_pred CCCCcceecccch----------HHHhcCCCCeEEEEeecCCC
Q 043382 147 LRSNILSYNLGAL----------QSAQVQPNSYTLVVSTENIT 179 (329)
Q Consensus 147 lr~~v~~~dl~g~----------~lL~a~~~~~aLVVs~E~~S 179 (329)
++....+++-.+. ++|+.+..+.+||.++|.++
T Consensus 151 l~Gp~~tvs~aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~~~ 193 (406)
T PRK07967 151 IKGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELD 193 (406)
T ss_pred CCCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeeecccC
Confidence 9976666655444 88999999999999998754
No 121
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=88.65 E-value=1.7 Score=43.94 Aligned_cols=79 Identities=10% Similarity=0.019 Sum_probs=57.3
Q ss_pred chHHHHHHHHHHHHhcCCCCC-----CcCEEEEeccCCC------------------C--------CC-chHHHHHHHcC
Q 043382 99 TDDVIIGAIDERLAKTGFKHK-----DIGILVVNSSLFN------------------P--------TP-SLSAFIVNHYK 146 (329)
Q Consensus 99 a~~l~~~Aa~~aL~kagv~p~-----dId~LVv~ss~~~------------------~--------~P-s~aa~I~~~Lg 146 (329)
...++..|+.+||+++|+++. +...+++.++... . .| ..+..|...+|
T Consensus 93 ~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~g 172 (437)
T PLN02836 93 FIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRYG 172 (437)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHHHHHHHhC
Confidence 346789999999999998542 3556666654210 0 11 24567999999
Q ss_pred CCCCcceecccch----------HHHhcCCCCeEEEEeecC
Q 043382 147 LRSNILSYNLGAL----------QSAQVQPNSYTLVVSTEN 177 (329)
Q Consensus 147 lr~~v~~~dl~g~----------~lL~a~~~~~aLVVs~E~ 177 (329)
++....+++-.+. ++|++|..+.+||.++|.
T Consensus 173 l~Gp~~tv~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~ 213 (437)
T PLN02836 173 FQGPNHAAVTACATGAHSIGDAFRMIQFGDADVMVAGGTES 213 (437)
T ss_pred CCCceeceeChhHHHHHHHHHHHHHHHcCCCCEEEEccccc
Confidence 9977777766555 789999999999998886
No 122
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=87.89 E-value=1.2 Score=42.46 Aligned_cols=74 Identities=14% Similarity=0.121 Sum_probs=51.2
Q ss_pred hchHHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCcceec---ccch----------HHHhc
Q 043382 98 ETDDVIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSYN---LGAL----------QSAQV 164 (329)
Q Consensus 98 ea~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~d---l~g~----------~lL~a 164 (329)
.....+.++++++|+++|++++|||.++... +.+..-..+.+++|++.+-...+ .+.+ ++++.
T Consensus 216 ~~~~~~~~~i~~~l~~~g~~~~di~~~~~h~----~~~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~~a~~~~~L~~~~~~ 291 (319)
T PRK09352 216 FAVRELAKVAREALEAAGLTPEDIDWLVPHQ----ANLRIIDATAKKLGLPMEKVVVTVDKYGNTSAASIPLALDEAVRD 291 (319)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHhCCCHHHhhhhHHhhCCHHHHHHHHHHHHHHHc
Confidence 4445567899999999999999999998763 34455567899999975322222 2222 56665
Q ss_pred C---CCCeEEEEee
Q 043382 165 Q---PNSYTLVVST 175 (329)
Q Consensus 165 ~---~~~~aLVVs~ 175 (329)
+ +++++|+++.
T Consensus 292 g~~~~Gd~vll~s~ 305 (319)
T PRK09352 292 GRIKRGDLVLLEGF 305 (319)
T ss_pred CCCCCCCEEEEEEE
Confidence 4 4788888874
No 123
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=87.51 E-value=1.2 Score=42.27 Aligned_cols=75 Identities=19% Similarity=0.261 Sum_probs=52.0
Q ss_pred hhchHHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCcceecc---cch----------HHHh
Q 043382 97 KETDDVIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSYNL---GAL----------QSAQ 163 (329)
Q Consensus 97 ~ea~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~dl---~g~----------~lL~ 163 (329)
+.+.....++++++|+++|++++|||.+++.. +.+..-..+.+++|++.+-...++ +++ ++++
T Consensus 219 ~~~~~~~~~~i~~~l~~~g~~~~di~~~~~h~----~~~~~~~~~~~~lgl~~~~~~~~~~~~Gn~~sas~~~~L~~~~~ 294 (320)
T cd00830 219 KFAVRLMPESIEEALEKAGLTPDDIDWFVPHQ----ANLRIIEAVAKRLGLPEEKVVVNLDRYGNTSAASIPLALDEAIE 294 (320)
T ss_pred HHHHHhhHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHhCCCHHHhhhhHHhhCcHHHHHHHHHHHHHHH
Confidence 34456678899999999999999999988763 344555678999999743222222 222 5555
Q ss_pred cC---CCCeEEEEee
Q 043382 164 VQ---PNSYTLVVST 175 (329)
Q Consensus 164 a~---~~~~aLVVs~ 175 (329)
.+ +++++|+++.
T Consensus 295 ~~~~~~G~~vll~~~ 309 (320)
T cd00830 295 EGKLKKGDLVLLLGF 309 (320)
T ss_pred cCCCCCCCEEEEEEE
Confidence 54 5788888774
No 124
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=87.48 E-value=2.4 Score=42.44 Aligned_cols=80 Identities=14% Similarity=0.149 Sum_probs=56.9
Q ss_pred chHHHHHHHHHHHHhcCCC------CCCcCEEEEeccCC--------------------------CCCCc-hHHHHHHHc
Q 043382 99 TDDVIIGAIDERLAKTGFK------HKDIGILVVNSSLF--------------------------NPTPS-LSAFIVNHY 145 (329)
Q Consensus 99 a~~l~~~Aa~~aL~kagv~------p~dId~LVv~ss~~--------------------------~~~Ps-~aa~I~~~L 145 (329)
...++..|+++||+++|+. +++++++ +.++.. ...|+ .+..|...+
T Consensus 73 ~~~~al~aa~~Al~dAGl~~~~~~~~~r~Gv~-~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~ 151 (405)
T PRK09116 73 VSLMATRASELALEDAGLLGDPILTDGRMGIA-YGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFF 151 (405)
T ss_pred HHHHHHHHHHHHHHHcCCCCccccCCCcEEEE-EeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHh
Confidence 3567899999999999983 2344444 443220 01232 577899999
Q ss_pred CCCCCcceecccch----------HHHhcCCCCeEEEEeecCCC
Q 043382 146 KLRSNILSYNLGAL----------QSAQVQPNSYTLVVSTENIT 179 (329)
Q Consensus 146 glr~~v~~~dl~g~----------~lL~a~~~~~aLVVs~E~~S 179 (329)
|++....+++-.+. ++|+++..+.+||.++|..+
T Consensus 152 ~~~Gp~~ti~~acas~~~Al~~A~~~I~~G~~d~~lvgg~d~~~ 195 (405)
T PRK09116 152 GLKGRVIPTSSACTSGSQGIGYAYEAIKYGYQTVMLAGGAEELC 195 (405)
T ss_pred CCCCCcccccchhhhHHHHHHHHHHHHHcCCCCEEEEecchhcC
Confidence 99987766665544 88999999999999998754
No 125
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=86.93 E-value=2.9 Score=41.29 Aligned_cols=76 Identities=16% Similarity=0.118 Sum_probs=51.1
Q ss_pred chHHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHc-----CCCCCcceec---ccch----------H
Q 043382 99 TDDVIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHY-----KLRSNILSYN---LGAL----------Q 160 (329)
Q Consensus 99 a~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~L-----glr~~v~~~d---l~g~----------~ 160 (329)
+...+.++++++|+++|++++|||.++..- +.+..-..+.++| |++.+-...+ .++. .
T Consensus 270 ~~~~~~~~i~~~L~~~gl~~~DId~~v~Hq----~n~~~~~~v~~~l~~~~~gl~~~k~~~~~~~~GNt~sAsipi~L~~ 345 (378)
T PRK06816 270 IVVYTIKPLLELVDKRNLDPDDIDYFLPHY----SSEYFREKIVELLAKAGFMIPEEKWFTNLATVGNTGSASIYIMLDE 345 (378)
T ss_pred hHHHHHHHHHHHHHHcCCChhhCCEEeeCc----ccHHHHHHHHHHHHhccCCCChhheEEeccccccccchHHHHHHHH
Confidence 455668889999999999999999988543 3455556778877 7864321112 2222 4
Q ss_pred HHhcC---CCCeEEEEeecCC
Q 043382 161 SAQVQ---PNSYTLVVSTENI 178 (329)
Q Consensus 161 lL~a~---~~~~aLVVs~E~~ 178 (329)
.++.+ +++++++++.|.-
T Consensus 346 a~~~g~~~~Gd~vl~~~~~s~ 366 (378)
T PRK06816 346 LLNSGRLKPGQKILCFVPESG 366 (378)
T ss_pred HHHcCCCCCCCEEEEEEeccc
Confidence 45544 5788998887754
No 126
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=86.51 E-value=2.6 Score=42.02 Aligned_cols=79 Identities=11% Similarity=-0.005 Sum_probs=55.8
Q ss_pred chHHHHHHHHHHHHhcCCCCCCcC----EEEEeccC-CC-----------------CCC---------chHHHHHHHcCC
Q 043382 99 TDDVIIGAIDERLAKTGFKHKDIG----ILVVNSSL-FN-----------------PTP---------SLSAFIVNHYKL 147 (329)
Q Consensus 99 a~~l~~~Aa~~aL~kagv~p~dId----~LVv~ss~-~~-----------------~~P---------s~aa~I~~~Lgl 147 (329)
...++..|+++||+++|+++++++ .+++.++. .. ..| ..+..|...+|+
T Consensus 71 ~~~~~l~aa~eAl~dAGl~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (399)
T cd00832 71 MTRLALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHGM 150 (399)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHhCC
Confidence 357889999999999999775432 24444432 10 011 246789999999
Q ss_pred CCCcceecccch----------HHHhcCCCCeEEEEeecCC
Q 043382 148 RSNILSYNLGAL----------QSAQVQPNSYTLVVSTENI 178 (329)
Q Consensus 148 r~~v~~~dl~g~----------~lL~a~~~~~aLVVs~E~~ 178 (329)
+..+.+++-.+. ++|+.+. +.+||.++|..
T Consensus 151 ~Gp~~ti~~acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~ 190 (399)
T cd00832 151 RGPSGVVVAEQAGGLDALAQARRLVRRGT-PLVVSGGVDSA 190 (399)
T ss_pred CCCcccccchhHHHHHHHHHHHHHHHcCC-CeEEEEeeccc
Confidence 977777765544 7899999 99999998873
No 127
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=86.50 E-value=0.88 Score=43.35 Aligned_cols=73 Identities=18% Similarity=0.174 Sum_probs=57.7
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEeccC-CCCCCchHHHHHHHcCCCCCcceecccch------------HHHhcCCCCeE
Q 043382 104 IGAIDERLAKTGFKHKDIGILVVNSSL-FNPTPSLSAFIVNHYKLRSNILSYNLGAL------------QSAQVQPNSYT 170 (329)
Q Consensus 104 ~~Aa~~aL~kagv~p~dId~LVv~ss~-~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~------------~lL~a~~~~~a 170 (329)
.+|+..+|++++++-+||+--++.-.- +...- -.-.-++||. .++.||+++. ++++++....+
T Consensus 34 ~ea~tkal~da~ikys~vqqa~vgyvfgdstcg---qraiyevgmt-gipi~nvnnncatgssalflakqiiesgn~dcv 109 (408)
T KOG1406|consen 34 KEAITKALQDAGIKYSEVQQAVVGYVFGDSTCG---QRAIYEVGMT-GIPIYNVNNNCATGSSALFLAKQIIESGNSDCV 109 (408)
T ss_pred HHHHHHHHHhcCCCHHHHHhhhheeeecCCccc---hHHHHhcccc-CcceeeccCccccCchHHHHHHHHHhcCCcceE
Confidence 999999999999999999876555332 22222 2233489998 6999999887 88999999999
Q ss_pred EEEeecCCCC
Q 043382 171 LVVSTENITL 180 (329)
Q Consensus 171 LVVs~E~~S~ 180 (329)
|..+-|.+++
T Consensus 110 lalgfekm~~ 119 (408)
T KOG1406|consen 110 LALGFEKMER 119 (408)
T ss_pred EeechhhhCC
Confidence 9999999885
No 128
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=86.38 E-value=1.2 Score=42.68 Aligned_cols=73 Identities=14% Similarity=0.254 Sum_probs=49.4
Q ss_pred hchHHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCcceecc---cch----------HHHhc
Q 043382 98 ETDDVIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSYNL---GAL----------QSAQV 164 (329)
Q Consensus 98 ea~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~dl---~g~----------~lL~a 164 (329)
.+....-++++++|+++|++++|||.+++.-.. ...-..++++||++.+-...++ ++. .+++.
T Consensus 227 ~~~~~~~~~i~~~L~~~gl~~~did~~~~H~~~----~~~~~~i~~~l~l~~e~~~~~~~~~Gn~~sas~~~~L~~~~~~ 302 (329)
T PRK07204 227 LSSKYLMKFIDKLLMDAGYTLADIDLIVPHQAS----GPAMRLIRKKLGVDEERFVTIFEDHGNMIAASIPVALFEAIKQ 302 (329)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCCC----HHHHHHHHHHcCCCHHHhhhhHhhhCcHHHHHHHHHHHHHHHc
Confidence 344556788999999999999999999876443 1235588999999754322222 221 45555
Q ss_pred C---CCCeEEEEe
Q 043382 165 Q---PNSYTLVVS 174 (329)
Q Consensus 165 ~---~~~~aLVVs 174 (329)
+ +++++|+++
T Consensus 303 g~~~~Gd~vll~~ 315 (329)
T PRK07204 303 KKVQRGNKILLLG 315 (329)
T ss_pred CCCCCCCEEEEEE
Confidence 4 467788776
No 129
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=86.36 E-value=2.9 Score=41.85 Aligned_cols=79 Identities=15% Similarity=0.042 Sum_probs=55.5
Q ss_pred chHHHHHHHHHHHHhcCCCC-----CCcCEEEEeccCCC-----------------------------CCC---------
Q 043382 99 TDDVIIGAIDERLAKTGFKH-----KDIGILVVNSSLFN-----------------------------PTP--------- 135 (329)
Q Consensus 99 a~~l~~~Aa~~aL~kagv~p-----~dId~LVv~ss~~~-----------------------------~~P--------- 135 (329)
...++..|++++|+++|+++ +++++++-.+.... ..|
T Consensus 73 ~~~~a~~Aa~~Al~dAGl~~~~~~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n 152 (398)
T PRK06519 73 WQRLGTYAAGLALDDAGIKGNEELLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQLSN 152 (398)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhhhhh
Confidence 35677999999999999854 34555554432110 011
Q ss_pred chHHHHHHHcCCCCCcceecccch----------HHHhcCCCCeEEEEeecC
Q 043382 136 SLSAFIVNHYKLRSNILSYNLGAL----------QSAQVQPNSYTLVVSTEN 177 (329)
Q Consensus 136 s~aa~I~~~Lglr~~v~~~dl~g~----------~lL~a~~~~~aLVVs~E~ 177 (329)
..+..|...+|++....++.-.+. ++|+.+..+.+||.++|.
T Consensus 153 ~~a~~is~~~gl~Gp~~ti~~acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~ 204 (398)
T PRK06519 153 LLAGNISIVHKVTGSSRTFMGEESAGVSAIEIAFARIASGQSDHALVGGAYN 204 (398)
T ss_pred HHHHHHHHHhCCCCccccccCCccHHHHHHHHHHHHHHcCCCCEEEEeeecc
Confidence 256678889999876666654444 889999999999999986
No 130
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=85.79 E-value=2 Score=41.07 Aligned_cols=76 Identities=13% Similarity=0.132 Sum_probs=51.7
Q ss_pred HhhchHHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCcceec---ccch----------HHH
Q 043382 96 KKETDDVIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSYN---LGAL----------QSA 162 (329)
Q Consensus 96 ~~ea~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~d---l~g~----------~lL 162 (329)
.+++.+...++++++|+++|++++|||.+++. ++.+..-..+.++||++.+-...+ .+++ .++
T Consensus 222 ~~~~~~~~~~~~~~~L~~~gl~~~did~~~~h----~~~~~~~~~~~~~l~l~~~k~~~~l~~~Gn~~sas~~~~L~~~~ 297 (326)
T PRK05963 222 FTEAVRMMSGASQNVLASAAMTPQDIDRFFPH----QANARIVDKVCETIGIPRAKAASTLETYGNSSAATIPLSLSLAN 297 (326)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEeC----CCCHHHHHHHHHHcCCCHHHhhhhHHhhCcHHHHHHHHHHHHHH
Confidence 34456677889999999999999999998774 334566677899999975322211 1222 334
Q ss_pred hcC---CCCeEEEEee
Q 043382 163 QVQ---PNSYTLVVST 175 (329)
Q Consensus 163 ~a~---~~~~aLVVs~ 175 (329)
+.+ +++++|+++.
T Consensus 298 ~~~~~~~Gd~vll~~~ 313 (326)
T PRK05963 298 LEQPLREGERLLFAAA 313 (326)
T ss_pred HhCCCCCCCEEEEEEE
Confidence 433 4678888874
No 131
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=85.45 E-value=3.4 Score=43.17 Aligned_cols=78 Identities=15% Similarity=0.095 Sum_probs=55.1
Q ss_pred chHHHHHHHHHHHHhcCCCCC--------CcCEEEEeccC-C------------------C------CCC-chHHHHHHH
Q 043382 99 TDDVIIGAIDERLAKTGFKHK--------DIGILVVNSSL-F------------------N------PTP-SLSAFIVNH 144 (329)
Q Consensus 99 a~~l~~~Aa~~aL~kagv~p~--------dId~LVv~ss~-~------------------~------~~P-s~aa~I~~~ 144 (329)
...++..|++++|+++|++++ .++ +++.++. . . .++ ..+.+|+..
T Consensus 199 ~~~~al~Aa~eAL~dAGl~~~~~~~~~~~r~G-V~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~ 277 (540)
T PLN02787 199 FMLYLLTAGKKALADGGITEDVMKELDKTKCG-VLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMD 277 (540)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCCceE-EEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHHHHH
Confidence 346778999999999999764 234 4444432 1 0 011 235689999
Q ss_pred cCCCCCcceecccch----------HHHhcCCCCeEEEEeecC
Q 043382 145 YKLRSNILSYNLGAL----------QSAQVQPNSYTLVVSTEN 177 (329)
Q Consensus 145 Lglr~~v~~~dl~g~----------~lL~a~~~~~aLVVs~E~ 177 (329)
+|++....+++-.+. ++|+.|..+.+||.++|.
T Consensus 278 ~gl~Gp~~tistACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~ 320 (540)
T PLN02787 278 LGWMGPNYSISTACATSNFCILNAANHIIRGEADVMLCGGSDA 320 (540)
T ss_pred hCCCCCccccccccccHHHHHHHHHHHHHcCCCCEEEEecccc
Confidence 999876666654444 789999999999999995
No 132
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=84.33 E-value=3 Score=39.66 Aligned_cols=73 Identities=15% Similarity=0.241 Sum_probs=50.3
Q ss_pred hchHHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCccee-cc---cch----------HHHh
Q 043382 98 ETDDVIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSY-NL---GAL----------QSAQ 163 (329)
Q Consensus 98 ea~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~-dl---~g~----------~lL~ 163 (329)
+....+.++++++|+++|++++|||.+++.. +.+..-..++++||++.+ +.+ ++ ++. .+++
T Consensus 216 ~~~~~~~~~~~~~l~~~g~~~~di~~~~~h~----~~~~~~~~~~~~lgi~~~-k~~~~~~~~Gn~~sas~~~~L~~~~~ 290 (318)
T TIGR00747 216 HAVRKMGDVVEETLEANGLDPEDIDWFVPHQ----ANLRIIEALAKRLELDMS-QVVKTVHKYGNTSAASIPLALDELLR 290 (318)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHcCCCHH-HeeehHhhhCCHHHHHHHHHHHHHHH
Confidence 3445567789999999999999999998643 345566679999999742 222 22 122 4555
Q ss_pred cC---CCCeEEEEee
Q 043382 164 VQ---PNSYTLVVST 175 (329)
Q Consensus 164 a~---~~~~aLVVs~ 175 (329)
.+ +++++|+++.
T Consensus 291 ~~~~~~Gd~vll~~~ 305 (318)
T TIGR00747 291 TGRIKPGDLLLLVAF 305 (318)
T ss_pred cCCCCCCCEEEEEEE
Confidence 54 4688888874
No 133
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=83.84 E-value=1.9 Score=42.10 Aligned_cols=81 Identities=14% Similarity=0.103 Sum_probs=62.7
Q ss_pred chHHHHHHHHHHHHhcCCCCCCcCEEEEeccC-CCCCCchHHHHHHHcCCCCCcceeccc-----ch-------HHHhcC
Q 043382 99 TDDVIIGAIDERLAKTGFKHKDIGILVVNSSL-FNPTPSLSAFIVNHYKLRSNILSYNLG-----AL-------QSAQVQ 165 (329)
Q Consensus 99 a~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~-~~~~Ps~aa~I~~~Lglr~~v~~~dl~-----g~-------~lL~a~ 165 (329)
|.+|..-|++.+|+|++++|+|++-+|+.+.. -+.--..+-+.+=--||+-++.+.-++ || +-|+.|
T Consensus 30 A~~Lgsvaikaalera~v~~~~v~eVi~GnVl~AnlGQapaRQaalgAGlp~sv~~tTvNkvCaSgmKAv~laaQsI~~G 109 (396)
T KOG1390|consen 30 ATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANLGQAPARQAALGAGLPYSVPATTVNKVCASGMKAVILAAQSIQTG 109 (396)
T ss_pred hhhHHHHHHHHHHHhcCCCHHHhhhhhhccccccccCcchHHHHHhhcCCCcceeeEeehhhhhhhHHHHHHHHHHHhcC
Confidence 45666999999999999999999999998665 454445555555566777667666554 33 667888
Q ss_pred CCCeEEEEeecCCC
Q 043382 166 PNSYTLVVSTENIT 179 (329)
Q Consensus 166 ~~~~aLVVs~E~~S 179 (329)
-.+.++.-+.|.+|
T Consensus 110 ~~divVaGGmEsMS 123 (396)
T KOG1390|consen 110 HADIVVAGGMESMS 123 (396)
T ss_pred CccEEEecccchhc
Confidence 88999999999999
No 134
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=83.41 E-value=1.6 Score=41.50 Aligned_cols=76 Identities=20% Similarity=0.238 Sum_probs=53.6
Q ss_pred chHHHHHHHHHHHHhcCCCCCCcCEEEEe----ccCCCCCCchHHHHHHHcCCC----CCcceecccch-----------
Q 043382 99 TDDVIIGAIDERLAKTGFKHKDIGILVVN----SSLFNPTPSLSAFIVNHYKLR----SNILSYNLGAL----------- 159 (329)
Q Consensus 99 a~~l~~~Aa~~aL~kagv~p~dId~LVv~----ss~~~~~Ps~aa~I~~~Lglr----~~v~~~dl~g~----------- 159 (329)
+.++..-|++.+|+.+++.++.+|.+|+. ||.+ ..++.++.||+ .+..++-++-.
T Consensus 28 aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~aSSsD------gIYl~RHvGL~~GvP~e~pALtiNRLCGSGFQsiVNg 101 (396)
T KOG1391|consen 28 ATDLGVVAAKAALKAANVGAEAVDHVIMGNVLASSSD------GIYLARHVGLRVGVPKETPALTINRLCGSGFQSIVNG 101 (396)
T ss_pred hhhHHHHHHHHHHhhcCCChhhcceEEEeeeeeccCC------ceEeeeccccccCCcCccCceeehhhhcccHHHHHhh
Confidence 34555999999999999999999999976 3333 23455666664 34445554422
Q ss_pred -HHHhcCCCCeEEEEeecCCCC
Q 043382 160 -QSAQVQPNSYTLVVSTENITL 180 (329)
Q Consensus 160 -~lL~a~~~~~aLVVs~E~~S~ 180 (329)
+-+..+..+-+|.=++|++|.
T Consensus 102 aQ~I~vgea~ivL~GGtEnMSq 123 (396)
T KOG1391|consen 102 AQEICVGEAEIVLCGGTENMSQ 123 (396)
T ss_pred HHHhhcCcceEEEecCcccccc
Confidence 455667778888889999994
No 135
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=83.39 E-value=3.2 Score=39.91 Aligned_cols=76 Identities=13% Similarity=0.236 Sum_probs=51.4
Q ss_pred hhchHHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCcceec---ccch----------HHHh
Q 043382 97 KETDDVIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSYN---LGAL----------QSAQ 163 (329)
Q Consensus 97 ~ea~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~d---l~g~----------~lL~ 163 (329)
++....+.++.+++|+++|++++|||.+++.. ..+..-..+.++||++.+-...+ .+++ .+++
T Consensus 235 ~~~~~~~~~~~~~~L~~~g~~~~did~~i~H~----~~~~~~~~~~~~lgl~~~k~~~~~~~~GN~~sas~~~~L~~~~~ 310 (338)
T PRK09258 235 KEGVELAVDTWEAFLAQLGWAVEQVDRVICHQ----VGAAHTRAILKALGIDPEKVFTTFPTLGNMGPASLPITLAMAAE 310 (338)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEecCC----CCHHHHHHHHHHhCCCHHHceehHhhhCCcHHhHHHHHHHHHHH
Confidence 34455666788999999999999999887754 33445568899999975322222 2222 4555
Q ss_pred cC---CCCeEEEEeec
Q 043382 164 VQ---PNSYTLVVSTE 176 (329)
Q Consensus 164 a~---~~~~aLVVs~E 176 (329)
.+ +++++|+++..
T Consensus 311 ~g~~~~Gd~vll~~~G 326 (338)
T PRK09258 311 EGFLKPGDRVALLGIG 326 (338)
T ss_pred hCCCCCCCEEEEEEec
Confidence 43 57888888743
No 136
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=82.19 E-value=5.5 Score=39.49 Aligned_cols=45 Identities=11% Similarity=0.109 Sum_probs=34.6
Q ss_pred CchHHHHHHHcCCCCCcceecccch----------HHHhcCCCCeEEEEeecCCC
Q 043382 135 PSLSAFIVNHYKLRSNILSYNLGAL----------QSAQVQPNSYTLVVSTENIT 179 (329)
Q Consensus 135 Ps~aa~I~~~Lglr~~v~~~dl~g~----------~lL~a~~~~~aLVVs~E~~S 179 (329)
++.+..|+..||++.....++..+. ++|+++..+.+||+++|..+
T Consensus 137 ~~~a~~ia~~lgl~Gp~~~i~~acas~~~Al~~A~~~I~~G~~d~vlvgg~d~~~ 191 (392)
T PRK09185 137 GSLADFLRAYLGLSGPAYTISTACSSSAKVFASARRLLEAGLCDAAIVGGVDSLC 191 (392)
T ss_pred cHHHHHHHHHhCCCCCcccccChhHHHHHHHHHHHHHHHcCCCCEEEEeeccccC
Confidence 5688899999999864444443333 78999999999999998643
No 137
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=80.85 E-value=7.1 Score=38.29 Aligned_cols=77 Identities=8% Similarity=-0.032 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHhcCC--CCCCcCEEEEeccCCC-----------------CCC---------chHHHHHHHcCCCCCcc
Q 043382 101 DVIIGAIDERLAKTGF--KHKDIGILVVNSSLFN-----------------PTP---------SLSAFIVNHYKLRSNIL 152 (329)
Q Consensus 101 ~l~~~Aa~~aL~kagv--~p~dId~LVv~ss~~~-----------------~~P---------s~aa~I~~~Lglr~~v~ 152 (329)
..+..|++++++++|+ +++++++++-.+.... ..| ..+..|...+|+++...
T Consensus 6 ~~~~~a~~~a~~~a~~~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~~l~Gp~~ 85 (342)
T PRK14691 6 RYKWITFHPSLTHADNTEKQERTATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHFKGPIG 85 (342)
T ss_pred HHHHHHHHHHHHhCCCCCCcccEEEEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHHhCCCCCcc
Confidence 3448899999999995 6778877765532110 011 36677888999987666
Q ss_pred eecccch----------HHHhcCCCCeEEEEeecC
Q 043382 153 SYNLGAL----------QSAQVQPNSYTLVVSTEN 177 (329)
Q Consensus 153 ~~dl~g~----------~lL~a~~~~~aLVVs~E~ 177 (329)
+++-.+. ++|+.+..+.+||.++|.
T Consensus 86 ti~~aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~ 120 (342)
T PRK14691 86 APVTACAAGVQAIGDAVRMIRNNEADVALCGGAEA 120 (342)
T ss_pred ccccHhHHHHHHHHHHHHHHHcCCCCEEEEecccc
Confidence 6655544 889999999999999986
No 138
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=80.57 E-value=4.2 Score=40.18 Aligned_cols=73 Identities=11% Similarity=0.181 Sum_probs=49.5
Q ss_pred hchHHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCcceec---ccch----------HHHhc
Q 043382 98 ETDDVIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSYN---LGAL----------QSAQV 164 (329)
Q Consensus 98 ea~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~d---l~g~----------~lL~a 164 (329)
.+...+-++++++|+++|++++|||.++.... -+..-..++++||++.+-...+ .+++ .+++.
T Consensus 277 ~~~~~~~~~i~~~L~~~gl~~~dId~~v~Hq~----n~~~~~~~~~~Lgl~~ek~~~~l~~~GNt~sAsi~~~L~~~~~~ 352 (379)
T PLN02326 277 FAVRCVPQVIESALQKAGLTAESIDWLLLHQA----NQRIIDAVAQRLGIPPEKVISNLANYGNTSAASIPLALDEAVRS 352 (379)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHcCCCHHHeeecHhhcCcHHHHHHHHHHHHHHHc
Confidence 34455667899999999999999998887643 3334456899999986432222 2333 45554
Q ss_pred C---CCCeEEEEe
Q 043382 165 Q---PNSYTLVVS 174 (329)
Q Consensus 165 ~---~~~~aLVVs 174 (329)
+ +++++|+++
T Consensus 353 g~~~~Gd~vll~~ 365 (379)
T PLN02326 353 GKVKKGDVIATAG 365 (379)
T ss_pred CCCCCCCEEEEEE
Confidence 3 567888876
No 139
>PRK06840 hypothetical protein; Validated
Probab=80.28 E-value=4.9 Score=38.70 Aligned_cols=69 Identities=22% Similarity=0.294 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCccee---cccch----------HHHhcC---
Q 043382 102 VIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSY---NLGAL----------QSAQVQ--- 165 (329)
Q Consensus 102 l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~---dl~g~----------~lL~a~--- 165 (329)
...++++++|+++|++++|||.++..- .-+..-..+.++||++.+- .+ +.+++ .+++.+
T Consensus 238 ~~~~~i~~~L~~~gl~~~did~~~~h~----~~~~~~~~~~~~Lgl~~~~-~~~~~~~Gn~~sas~~~~L~~~~~~~~~~ 312 (339)
T PRK06840 238 NFLKVIREALRKSGYTPKDIDYLAILH----MKRSAHIALLEGLGLTEEQ-AIYLDEYGHLGQLDQILSLHLALEQGKLK 312 (339)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEECC----cCHHHHHHHHHHcCCCHHH-eEeHHhccchhhhhHHHHHHHHHHcCCCC
Confidence 456899999999999999999987532 2344445689999997422 22 22222 455544
Q ss_pred CCCeEEEEee
Q 043382 166 PNSYTLVVST 175 (329)
Q Consensus 166 ~~~~aLVVs~ 175 (329)
+++++|+++.
T Consensus 313 ~Gd~ill~~~ 322 (339)
T PRK06840 313 DGDLVVLVSA 322 (339)
T ss_pred CCCEEEEEEE
Confidence 5777888773
No 140
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=77.99 E-value=7.6 Score=38.62 Aligned_cols=76 Identities=12% Similarity=0.144 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHhcCCCC--CCcCEEEEeccCC----------------------------CCCC-chHHHHHHHcCCCCC
Q 043382 102 VIIGAIDERLAKTGFKH--KDIGILVVNSSLF----------------------------NPTP-SLSAFIVNHYKLRSN 150 (329)
Q Consensus 102 l~~~Aa~~aL~kagv~p--~dId~LVv~ss~~----------------------------~~~P-s~aa~I~~~Lglr~~ 150 (329)
++..|+++||+++|+++ +++++++-.+... ..+| ..+..|...+|++..
T Consensus 59 ~~~~a~~~Al~dagl~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~~Gp 138 (381)
T PRK05952 59 LTKTVVTAALKDAGLTPPLTDCGVVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGTQGP 138 (381)
T ss_pred HHHHHHHHHHHhcCCCCCCCCEEEEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCCCCc
Confidence 45689999999999964 5666555332100 0122 246678899999976
Q ss_pred cceecccch----------HHHhcCCCCeEEEEeecC
Q 043382 151 ILSYNLGAL----------QSAQVQPNSYTLVVSTEN 177 (329)
Q Consensus 151 v~~~dl~g~----------~lL~a~~~~~aLVVs~E~ 177 (329)
..+++-.+. ++|+.+..+.+||.++|.
T Consensus 139 ~~ti~~aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~ 175 (381)
T PRK05952 139 VLAPMAACATGLWAIAQGVELIQTGQCQRVIAGAVEA 175 (381)
T ss_pred cccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccc
Confidence 666654443 889999999999999996
No 141
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=77.57 E-value=4.8 Score=38.62 Aligned_cols=69 Identities=13% Similarity=0.209 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCcceecc---cch----------HHHhcC---
Q 043382 102 VIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSYNL---GAL----------QSAQVQ--- 165 (329)
Q Consensus 102 l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~dl---~g~----------~lL~a~--- 165 (329)
..-++++++|+++|++++|||.+++.-.. +..-..+.++||++.+-...++ +++ .+++.+
T Consensus 227 ~~~~~i~~~L~~~g~~~~did~~~~hq~~----~~~~~~~~~~lgl~~~k~~~~l~~~Gn~~sasi~~~L~~~~~~g~~~ 302 (326)
T CHL00203 227 QVPAVIIKCLNALNISIDEVDWFILHQAN----KRILEAIANRLSVPNSKMITNLEKYGNTSAASIPLALDEAIQNNKIQ 302 (326)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHhCCCHHHhhhHHHhhCcHHHHHHHHHHHHHHHhCCCC
Confidence 35667899999999999999998876433 4455678999999753222222 222 445543
Q ss_pred CCCeEEEEe
Q 043382 166 PNSYTLVVS 174 (329)
Q Consensus 166 ~~~~aLVVs 174 (329)
+++++|+++
T Consensus 303 ~Gd~vll~~ 311 (326)
T CHL00203 303 PGQIIVLSG 311 (326)
T ss_pred CCCEEEEEE
Confidence 467888877
No 142
>PRK09585 anmK anhydro-N-acetylmuramic acid kinase; Reviewed
Probab=77.42 E-value=10 Score=37.75 Aligned_cols=71 Identities=15% Similarity=0.207 Sum_probs=53.9
Q ss_pred chhHHHHHhhchHHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCc--------hHHHHHHHcCCCC--Ccceecccc
Q 043382 89 NRHMKEAKKETDDVIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPS--------LSAFIVNHYKLRS--NILSYNLGA 158 (329)
Q Consensus 89 ~~~ma~~~~ea~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps--------~aa~I~~~Lglr~--~v~~~dl~g 158 (329)
...+.+...+...+..+|++++++++|++++|||+|=+.-+|-+-.|. -.+.|+++.|++- |-++-|+..
T Consensus 59 ~~~l~~l~~~lg~~~a~av~~~~~~~~l~~~~id~IgsHGQTv~H~P~~~~TlQiG~~~~iA~~tgi~VV~DFR~~D~a~ 138 (365)
T PRK09585 59 LERLAELDTALGRLFAEAVNALLAEAGLSPEDIDAIGSHGQTVRHRPGEGFTLQIGDGALIAELTGITVVADFRRRDVAA 138 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCccCccEEEeCCcccccCCCCCCeEEcCCHHHHHHHHCcCEEecChHHHHhc
Confidence 346777777788899999999999999999999999888777333332 5788999999973 344445543
Q ss_pred h
Q 043382 159 L 159 (329)
Q Consensus 159 ~ 159 (329)
+
T Consensus 139 G 139 (365)
T PRK09585 139 G 139 (365)
T ss_pred C
Confidence 3
No 143
>KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=76.93 E-value=3 Score=40.23 Aligned_cols=81 Identities=9% Similarity=0.078 Sum_probs=57.8
Q ss_pred chHHHHHHHHHHHHhcCCCCCCcCEEEEeccC-CCCCCchHHHHHHHcCCCCCcceeccc------------chHHHhcC
Q 043382 99 TDDVIIGAIDERLAKTGFKHKDIGILVVNSSL-FNPTPSLSAFIVNHYKLRSNILSYNLG------------ALQSAQVQ 165 (329)
Q Consensus 99 a~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~-~~~~Ps~aa~I~~~Lglr~~v~~~dl~------------g~~lL~a~ 165 (329)
..+++-+|...+|+|+.++.+.||.+|+.|.. ..-+-..+..-+-.-|.+..+++.-+. ||++|.++
T Consensus 66 phdlar~al~~ll~kt~lpke~~dyii~gtviqevktsniareaal~agfsdktpahtvtmacissn~amttgmgliatg 145 (465)
T KOG1392|consen 66 PHDLAREALKALLEKTKLPKEQLDYIICGTVIQEVKTSNIAREAALLAGFSDKTPAHTVTMACISSNVAMTTGMGLIATG 145 (465)
T ss_pred hhHHHHHHHHHHHHhccCCHHHhceeeehhhHHHHhcchHHHHHHHhcCCCCCCccceeeeehhccchhhhccceeEeeC
Confidence 36777999999999999999999999999876 455555555555555665444433222 22788888
Q ss_pred CCCeEEEEeecCCC
Q 043382 166 PNSYTLVVSTENIT 179 (329)
Q Consensus 166 ~~~~aLVVs~E~~S 179 (329)
..+.++.=+.|.+|
T Consensus 146 ~~dvivaggvelms 159 (465)
T KOG1392|consen 146 NADVIVAGGVELMS 159 (465)
T ss_pred CcCEEEEcceeecc
Confidence 77766666778887
No 144
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=76.74 E-value=5.7 Score=39.88 Aligned_cols=50 Identities=20% Similarity=0.255 Sum_probs=38.5
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCcceecccch
Q 043382 104 IGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSYNLGAL 159 (329)
Q Consensus 104 ~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~ 159 (329)
..|++++|+++|++++|||++=++ ...+...-...+.||+.. ..+|++|.
T Consensus 303 ~~a~~~al~~AGl~~~DID~~ei~----daFa~~~l~~~e~lG~~~--~~vN~~GG 352 (402)
T PRK08242 303 VPATRKALAKAGLTVDDIDLFELN----EAFASVVLRFMQALDIPH--DKVNVNGG 352 (402)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEec----chhhHHHHHHHHHhCCCC--cCCCcCCC
Confidence 469999999999999999988653 334555566788899863 36777776
No 145
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=76.65 E-value=5.3 Score=39.79 Aligned_cols=51 Identities=14% Similarity=0.172 Sum_probs=37.9
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCcceecccch
Q 043382 103 IIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSYNLGAL 159 (329)
Q Consensus 103 ~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~ 159 (329)
...|++++|+++|++|+|||.+-++- ..+...-+..+.||+.. ..+|++|.
T Consensus 293 ~~~a~~~al~~agl~~~dId~~e~~d----~f~~~~~~~~e~lg~~~--~~vn~~Gg 343 (393)
T PRK05656 293 PVSATRRCLDKAGWSLAELDLIEANE----AFAAQSLAVGKELGWDA--AKVNVNGG 343 (393)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecC----ccHHHHHHHHHHhCCCC--ccCCcCCC
Confidence 36899999999999999999987642 24455556778888752 34667766
No 146
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=76.50 E-value=4.4 Score=40.58 Aligned_cols=53 Identities=13% Similarity=0.103 Sum_probs=38.8
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCcceecccch
Q 043382 103 IIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSYNLGAL 159 (329)
Q Consensus 103 ~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~ 159 (329)
...|++++|+++|++|+|||++- .....+...-+..+.||+-.+-..+|.+|.
T Consensus 299 ~~~a~~~al~~Agl~~~DId~~e----i~D~f~~~~l~~~e~lg~~~~~~pvN~~GG 351 (401)
T PRK09050 299 PAPATRKLLARLGLTIDQFDVIE----LNEAFAAQGLAVLRQLGLADDDARVNPNGG 351 (401)
T ss_pred HHHHHHHHHHHcCCCHHHCCccc----cCcHhHHHHHHHHHHcCCCCCCCCEeCCCc
Confidence 36799999999999999999875 322345555667788998543456676666
No 147
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=76.42 E-value=4.3 Score=40.69 Aligned_cols=53 Identities=15% Similarity=0.112 Sum_probs=38.7
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCcceecccch
Q 043382 103 IIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSYNLGAL 159 (329)
Q Consensus 103 ~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~ 159 (329)
...|++++|+++|++|+|||++- .............+.||+..+-..+|.+|.
T Consensus 298 ~~~A~~~al~~AGl~~~DID~ie----i~dafa~~~l~~~e~lg~~~~~~pvN~~GG 350 (400)
T PRK13359 298 PAPATQKLLARLGMTLDQFDVIE----LNEAFASQGLAVLRELGLADDDARVNPNGG 350 (400)
T ss_pred HHHHHHHHHHHhCCCHHHcCcCc----cCcHhHHHHHHHHHHcCCCCCCCCEECCCc
Confidence 36899999999999999999875 222344556667788998433456776666
No 148
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=76.12 E-value=4.9 Score=39.93 Aligned_cols=50 Identities=16% Similarity=0.165 Sum_probs=39.8
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCcceecccch
Q 043382 104 IGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSYNLGAL 159 (329)
Q Consensus 104 ~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~ 159 (329)
..|++++|+++|++|+|||++=++ -......-+-.+.||+..+ .+|.+|.
T Consensus 288 ~~A~~~al~~Agl~~~DiDv~Ei~----daFa~~~l~~le~lgl~g~--~vN~~GG 337 (388)
T PRK06366 288 IPATRKLLEKQNKSIDYYDLVEHN----EAFSIASIIVRDQLKIDNE--RFNVNGG 337 (388)
T ss_pred HHHHHHHHHHcCCCHHHcceeecc----chhHHHHHHHHHHhCCCCC--ccCCCCc
Confidence 689999999999999999977444 3344566677888999754 7898887
No 149
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=76.00 E-value=5.3 Score=41.25 Aligned_cols=52 Identities=17% Similarity=0.082 Sum_probs=39.7
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCC-cceecccch
Q 043382 104 IGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSN-ILSYNLGAL 159 (329)
Q Consensus 104 ~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~-v~~~dl~g~ 159 (329)
..|+++|++++|++++|||++=+. ...|...-+-.+.||+..+ -..+|++|+
T Consensus 295 ~~aa~~a~~~AGi~~~Did~~ely----dcF~~~~~~~~E~LGl~~~g~~pvN~sGG 347 (498)
T PRK08257 295 RAAGRRALALAGLGIDDIDAFDLY----SCFPSAVQVAARELGLDLDDPRPLTVTGG 347 (498)
T ss_pred HHHHHHHHHHhCCCHHHCCEEEec----cCCHHHHHHHHHHcCcCCCCCCCcCCCcC
Confidence 469999999999999999988443 3356666777899999753 236777776
No 150
>PRK05790 putative acyltransferase; Provisional
Probab=75.72 E-value=4.8 Score=39.94 Aligned_cols=51 Identities=18% Similarity=0.261 Sum_probs=37.6
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCcceecccch
Q 043382 103 IIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSYNLGAL 159 (329)
Q Consensus 103 ~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~ 159 (329)
...|++++|+++|++|+|||++=++ .......-+..+.||+.. ..+|++|.
T Consensus 293 ~~~a~~~a~~~Agi~~~did~~e~~----d~f~~~~l~~~e~lg~~~--~pvN~~GG 343 (393)
T PRK05790 293 PVPAIRKALEKAGWSLADLDLIEIN----EAFAAQALAVEKELGLDP--EKVNVNGG 343 (393)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEeC----cHHHHHHHHHHHHhCCCh--hhcCCCcc
Confidence 3579999999999999999998542 234445556788899852 35677776
No 151
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=75.53 E-value=5.1 Score=39.63 Aligned_cols=51 Identities=18% Similarity=0.253 Sum_probs=35.5
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCcceecccch
Q 043382 103 IIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSYNLGAL 159 (329)
Q Consensus 103 ~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~ 159 (329)
...|++++++++|++|+|||.+-+. -..+....+..+.||+.. ..+|++|.
T Consensus 287 ~~~a~~~a~~~Agi~~~did~~e~~----d~f~~~~~~~~e~lg~~~--~pvn~~GG 337 (386)
T cd00751 287 PVPAIPKALKRAGLTLDDIDLIEIN----EAFAAQALACLKELGLDP--EKVNVNGG 337 (386)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEee----chhHHHHHHHHHHhCCCh--hhcCCCcc
Confidence 3589999999999999999988654 112234555678888753 23455554
No 152
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=75.42 E-value=3.8 Score=41.07 Aligned_cols=51 Identities=14% Similarity=0.139 Sum_probs=36.3
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCcceecccch
Q 043382 103 IIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSYNLGAL 159 (329)
Q Consensus 103 ~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~ 159 (329)
...|+++||+++|++|+|||++= .....+...-+-.+.||+.. ..+|.+|.
T Consensus 305 ~~~a~~~al~~Agi~~~did~~e----i~d~f~~~~l~~le~lg~~~--~pvN~~GG 355 (406)
T PRK07851 305 PVEASKQALARAGMSIDDIDLVE----INEAFAAQVLPSARELGIDE--DKLNVSGG 355 (406)
T ss_pred HHHHHHHHHHHhCCCHHHCCeeh----hhhHHHHHHHHHHHHhCCCc--cccCCCCC
Confidence 36799999999999999999882 22334445555568888853 25666665
No 153
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=75.05 E-value=12 Score=35.44 Aligned_cols=47 Identities=19% Similarity=0.124 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCEEEEeccC-CCCCCchHHHHHHHcCC
Q 043382 101 DVIIGAIDERLAKTGFKHKDIGILVVNSSL-FNPTPSLSAFIVNHYKL 147 (329)
Q Consensus 101 ~l~~~Aa~~aL~kagv~p~dId~LVv~ss~-~~~~Ps~aa~I~~~Lgl 147 (329)
....++++++|+++|++++|||.++..... .....-........++.
T Consensus 205 ~~~~~~i~~al~~agl~~~did~~~~h~~~~~~~~~~e~~~~~~~~~~ 252 (332)
T cd00825 205 EGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGD 252 (332)
T ss_pred HHHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCCCHHHHHHHHHHhCC
Confidence 445789999999999999999999988544 33333344444555553
No 154
>PRK14878 UGMP family protein; Provisional
Probab=74.33 E-value=6.2 Score=38.32 Aligned_cols=84 Identities=17% Similarity=0.099 Sum_probs=48.4
Q ss_pred HHhhchHHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCch-HHHHHHHcCCCCCcceecccch------HHHhcCC-
Q 043382 95 AKKETDDVIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSL-SAFIVNHYKLRSNILSYNLGAL------QSAQVQP- 166 (329)
Q Consensus 95 ~~~ea~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~-aa~I~~~Lglr~~v~~~dl~g~------~lL~a~~- 166 (329)
.|...+.+. .+++++|+++|++++|||.+.+.......+.-. ....++.|...-+++-+-++.. .++.++.
T Consensus 41 ~~~h~~~l~-~~i~~~l~~a~~~~~did~Iavt~gPG~~~~lrvg~~~Ak~la~~~~~p~~~v~h~~~Ha~sa~~~s~~~ 119 (323)
T PRK14878 41 AQHHAEVAP-ELLRKALEKAGISIEDIDAVAVSQGPGLGPALRVGATAARALALKYNKPLVPVNHCIAHIEIGRLTTGAK 119 (323)
T ss_pred HHHHHHHHH-HHHHHHHHHcCCCHHHCCEEEEecCCCcccchHHHHHHHHHHHHHhCCCccccchHHHHHHhhhhcCCCC
Confidence 344454444 999999999999999999999887764333211 1112333322222333334433 4454442
Q ss_pred CCeEEEEeecCCC
Q 043382 167 NSYTLVVSTENIT 179 (329)
Q Consensus 167 ~~~aLVVs~E~~S 179 (329)
..-+|+|++...+
T Consensus 120 ~~l~l~vsGg~t~ 132 (323)
T PRK14878 120 DPVVLYVSGGNTQ 132 (323)
T ss_pred CCEEEEEEcCCeE
Confidence 3356777776444
No 155
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=74.15 E-value=8.3 Score=38.36 Aligned_cols=51 Identities=20% Similarity=0.277 Sum_probs=40.7
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCcceecccch
Q 043382 103 IIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSYNLGAL 159 (329)
Q Consensus 103 ~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~ 159 (329)
...|++++|+++|++|+|||.+=++- ..+...-+-.+.||+.. ..+|.+|.
T Consensus 294 ~~~a~~~al~~Agl~~~dId~~e~~d----~f~~~~l~~~e~lg~~~--~~vN~~GG 344 (394)
T PRK06445 294 PVPASKKALEKAGLSVKDIDLWEINE----AFAVVVLYAIKELGLDP--ETVNIKGG 344 (394)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecc----cchHHHHHHHHHhCCCc--cccCCCCC
Confidence 46799999999999999999875443 45666777889999864 36888887
No 156
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=73.81 E-value=5.4 Score=40.35 Aligned_cols=50 Identities=20% Similarity=0.280 Sum_probs=37.3
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCcceecccch
Q 043382 104 IGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSYNLGAL 159 (329)
Q Consensus 104 ~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~ 159 (329)
..|++++|+++|++++|||.+-++- ..........+++|+.. ..+|++|.
T Consensus 318 ~~Ai~~aL~~AGl~~~DID~~ei~e----aFa~~~l~~~~~lg~~~--~~vN~~GG 367 (417)
T PRK06025 318 VPAAKKVLAKAGLTKDDIDLWEINE----AFAVVAEKFIRDLDLDR--DKVNVNGG 367 (417)
T ss_pred HHHHHHHHHHcCCCHHHCcEEEEch----HHHHHHHHHHHHcCCCh--hhccccCC
Confidence 4799999999999999999998652 22344557788899863 35566664
No 157
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=73.27 E-value=2.3 Score=34.80 Aligned_cols=45 Identities=18% Similarity=0.153 Sum_probs=30.8
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEec-cCCCCCCchHHHHHHHcCCC
Q 043382 104 IGAIDERLAKTGFKHKDIGILVVNS-SLFNPTPSLSAFIVNHYKLR 148 (329)
Q Consensus 104 ~~Aa~~aL~kagv~p~dId~LVv~s-s~~~~~Ps~aa~I~~~Lglr 148 (329)
.++++++|+++|++|+|||.|.... .+..--+.-+.-+.+-++-.
T Consensus 28 ~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~ 73 (119)
T PF02801_consen 28 ARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGDS 73 (119)
T ss_dssp HHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhhhccc
Confidence 7889999999999999999998763 33444455555666666653
No 158
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=73.22 E-value=5.6 Score=38.88 Aligned_cols=53 Identities=23% Similarity=0.255 Sum_probs=42.9
Q ss_pred HHHhhchHHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCC
Q 043382 94 EAKKETDDVIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSN 150 (329)
Q Consensus 94 ~~~~ea~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~ 150 (329)
+-.+++...+.++++++|+++|++++|||.+|.. +.-...-..+.++||++.+
T Consensus 216 ~vfk~av~~~~~~~~~~L~~~~l~~~dId~~vpH----Qan~ri~~~i~~~l~~~~~ 268 (323)
T COG0332 216 EVFKFAVRAMPKAIEEVLEKAGLTPEDIDWFVPH----QANLRIIEAIAKKLGIPEE 268 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEccc----cccHHHHHHHHHHcCCCHH
Confidence 5566789999999999999999999999998754 3444555678999999643
No 159
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=73.10 E-value=8.6 Score=38.30 Aligned_cols=50 Identities=20% Similarity=0.165 Sum_probs=37.8
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCcceecccch
Q 043382 104 IGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSYNLGAL 159 (329)
Q Consensus 104 ~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~ 159 (329)
..|++++|+++|++|+|||++=++ ...+...-+..+.||+.. ..+|.+|.
T Consensus 288 ~~a~~~al~~agl~~~did~~ei~----d~F~~~~l~~~e~lg~~~--~pvN~~GG 337 (387)
T PRK07850 288 VQATAKVLEKAGMKIGDIDLVEIN----EAFASVVLSWAQVHEPDM--DKVNVNGG 337 (387)
T ss_pred HHHHHHHHHHcCCCHHHcCeeeec----ccchHHHHHHHHHcCCCC--CCcCCCCc
Confidence 689999999999999999988664 223344445568889863 47888877
No 160
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=73.10 E-value=14 Score=37.24 Aligned_cols=80 Identities=5% Similarity=-0.049 Sum_probs=55.7
Q ss_pred chHHHHHHHHHHHHhcCC---CCCCcCEEEEeccCCC-------------------------CCC-chHHHHHHHcCCCC
Q 043382 99 TDDVIIGAIDERLAKTGF---KHKDIGILVVNSSLFN-------------------------PTP-SLSAFIVNHYKLRS 149 (329)
Q Consensus 99 a~~l~~~Aa~~aL~kagv---~p~dId~LVv~ss~~~-------------------------~~P-s~aa~I~~~Lglr~ 149 (329)
...++..|+.++|+++|+ +++.+++++-.+.... ..| ..+..|...+|++.
T Consensus 83 ~~~~~l~aa~~AledAg~~~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~~G 162 (418)
T PRK07910 83 LQRMSTVLGRRVWENAGSPEVDTNRLMVSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHAKA 162 (418)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCcccEEEEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhCCCC
Confidence 356788999999999995 5667776554432110 112 24566778888886
Q ss_pred Ccceecccch----------HHHhcCCCCeEEEEeecCC
Q 043382 150 NILSYNLGAL----------QSAQVQPNSYTLVVSTENI 178 (329)
Q Consensus 150 ~v~~~dl~g~----------~lL~a~~~~~aLVVs~E~~ 178 (329)
...+++-.+. ++|+.|..+.++|.++|..
T Consensus 163 ~~~ti~taCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~ 201 (418)
T PRK07910 163 GVITPVSACASGSEAIAQAWRQIVLGEADIAICGGVETR 201 (418)
T ss_pred CcccccchhHHHHHHHHHHHHHHHcCCCCEEEEcccccc
Confidence 6666654444 8899999999999999874
No 161
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=72.97 E-value=5.8 Score=39.58 Aligned_cols=50 Identities=18% Similarity=0.110 Sum_probs=38.4
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCcceecccch
Q 043382 104 IGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSYNLGAL 159 (329)
Q Consensus 104 ~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~ 159 (329)
..|++++|+++|++|+|||++= ..-..+...-+..+.||+.. ..+|++|.
T Consensus 294 ~~a~~~al~~agl~~~did~~e----~~d~f~~~~l~~~e~lg~~~--~pvN~~GG 343 (393)
T PRK08235 294 GYAINALLEKTGKTVEDIDLFE----INEAFAAVALASTEIAGIDP--EKVNVNGG 343 (393)
T ss_pred HHHHHHHHHHhCCCHHHCCeeh----hcchhHHHHHHHHHHhCCCc--ccCCcCCc
Confidence 5799999999999999999883 33345556667788999853 36677776
No 162
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=72.80 E-value=5.9 Score=39.72 Aligned_cols=52 Identities=13% Similarity=0.165 Sum_probs=38.5
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCcceecccch
Q 043382 104 IGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSYNLGAL 159 (329)
Q Consensus 104 ~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~ 159 (329)
..|++++|+++|++|+|||++= .....+...-+..+.||+-.+-..+|.+|.
T Consensus 299 ~~a~~~al~~Agl~~~DID~~e----i~D~f~~~~l~~~e~lG~~~~~~pvN~~GG 350 (400)
T TIGR02430 299 VPATQKLLARAGLSIDQFDVIE----LNEAFAAQALAVLRELGLADDDARVNPNGG 350 (400)
T ss_pred HHHHHHHHHHhCCCHHHCCCcc----cCcHHHHHHHHHHHHcCCCCCCCeECCCCc
Confidence 6799999999999999999875 333445566677788998543346666665
No 163
>PRK09051 beta-ketothiolase; Provisional
Probab=72.17 E-value=8.1 Score=38.58 Aligned_cols=51 Identities=14% Similarity=0.206 Sum_probs=39.5
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCcceecccch
Q 043382 103 IIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSYNLGAL 159 (329)
Q Consensus 103 ~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~ 159 (329)
...|++++|+++|++|+|||++=++ -..+....+..+.||+. -..+|.+|.
T Consensus 294 ~~~a~~~al~~agi~~~did~~ei~----d~f~~~~~~~~e~lg~~--~~~vN~~GG 344 (394)
T PRK09051 294 PVPATQKALERAGLTVADLDVIEAN----EAFAAQACAVTRELGLD--PAKVNPNGS 344 (394)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEec----CccHHHHHHHHHHhCCC--ccccCCCcc
Confidence 4789999999999999999998664 23455666778889985 346777776
No 164
>TIGR03722 arch_KAE1 universal archaeal protein Kae1. This family represents the archaeal protein Kae1. Its partner Bud32 is fused with it in about half of the known archaeal genomes. The pair, which appears universal in the archaea, corresponds to EKC/KEOPS complex in eukaryotes. A recent characterization of the member from Pyrococcus abyssi, as an iron-binding, atypical DNA-binding protein with an apurinic lyase activity, challenges the common annotation of close homologs as O-sialoglycoprotein endopeptidase. The latter annotation is based on a characterized protein from the bacterium Pasteurella haemolytica.
Probab=71.97 E-value=6.1 Score=38.25 Aligned_cols=84 Identities=17% Similarity=0.097 Sum_probs=46.8
Q ss_pred HHhhchHHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCc-hHHHHHHHcCCCCCcceecccch------HHHhcCC-
Q 043382 95 AKKETDDVIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPS-LSAFIVNHYKLRSNILSYNLGAL------QSAQVQP- 166 (329)
Q Consensus 95 ~~~ea~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps-~aa~I~~~Lglr~~v~~~dl~g~------~lL~a~~- 166 (329)
.|..++.+. ..++++|+++|++++|||.|.+.+-....+.- .....++.|...-+++.+-++.. .++.++.
T Consensus 42 ~~~H~~~l~-~~i~~~l~~~~~~~~did~Iavt~gPg~~~~l~vg~~~ak~la~~~~~p~~~v~h~~aHa~sa~~~s~~~ 120 (322)
T TIGR03722 42 AEHHAEVAP-KLIKEALEEAGVSLEDIDAVAFSQGPGLGPCLRVGATAARALALKLNKPLVGVNHCVAHIEIGRLTTGAK 120 (322)
T ss_pred HHHHHHHHH-HHHHHHHHHcCCCHHHCCEEEEecCCchHHhHHHHHHHHHHHHHHhCCCeechhhHHHHHHhhhccCCCC
Confidence 344444444 45999999999999999999988765322211 11112333332223444444444 3444432
Q ss_pred CCeEEEEeecCCC
Q 043382 167 NSYTLVVSTENIT 179 (329)
Q Consensus 167 ~~~aLVVs~E~~S 179 (329)
..-+|+|++...+
T Consensus 121 ~~lvL~vsGg~t~ 133 (322)
T TIGR03722 121 DPVVLYVSGGNTQ 133 (322)
T ss_pred CCeEEEEeCCceE
Confidence 2356777766443
No 165
>PRK09604 UGMP family protein; Validated
Probab=71.69 E-value=8.4 Score=37.55 Aligned_cols=72 Identities=19% Similarity=0.202 Sum_probs=46.1
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCC-----chHHHHHHHcCCCCCcceecccch------HHHhcCCCC
Q 043382 100 DDVIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTP-----SLSAFIVNHYKLRSNILSYNLGAL------QSAQVQPNS 168 (329)
Q Consensus 100 ~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~P-----s~aa~I~~~Lglr~~v~~~dl~g~------~lL~a~~~~ 168 (329)
.+.....++++|+++|++++|||.+.+.+.....+. +.+--++..++. +.+.++.. .++.++...
T Consensus 52 ~~~l~~~i~~~L~~~~~~~~did~iavt~GPG~~tglrvg~~~Ak~La~~~~i----pl~~v~h~~~ha~~a~~~s~~~~ 127 (332)
T PRK09604 52 VENIVPLIEEALKEAGLTLEDIDAIAVTAGPGLVGALLVGVSFAKALALALNK----PLIGVNHLEGHLLAPFLEEEPEF 127 (332)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcHHhHHHHHHHHHHHHHHhCC----CEEeecCHHHHHHhhhhccCCCC
Confidence 455678899999999999999999999887654333 223334444444 34444443 455555433
Q ss_pred --eEEEEee
Q 043382 169 --YTLVVST 175 (329)
Q Consensus 169 --~aLVVs~ 175 (329)
-+|+|++
T Consensus 128 ~~lvl~vsG 136 (332)
T PRK09604 128 PFLALLVSG 136 (332)
T ss_pred CEEEEEecC
Confidence 3566666
No 166
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=71.24 E-value=7.8 Score=38.72 Aligned_cols=53 Identities=15% Similarity=0.288 Sum_probs=37.5
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCC-cceecccch
Q 043382 103 IIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSN-ILSYNLGAL 159 (329)
Q Consensus 103 ~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~-v~~~dl~g~ 159 (329)
...|++++|+++|++|+|||++=++ ...+...-+..+.||+..+ ...+|.+|.
T Consensus 300 ~~~a~~~al~~Agl~~~Did~~ei~----d~f~~~~l~~~e~lg~~~~~~~~vN~~GG 353 (404)
T PRK06205 300 PVPATEKALARAGLTLDDIDLIELN----EAFAAQVLAVLKEWGFGADDEERLNVNGS 353 (404)
T ss_pred HHHHHHHHHHHcCCCHHHCCEeeec----cHHHHHHHHHHHHhCcCcccCCCcCCCCC
Confidence 4679999999999999999987633 2334555566777887531 114777776
No 167
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=71.06 E-value=4.2 Score=37.14 Aligned_cols=41 Identities=20% Similarity=0.249 Sum_probs=29.2
Q ss_pred cCCCCcCcHHHHHHHHHHhCCCCCCCEEEEEeechhhhhhh
Q 043382 250 FRNTSSSLVWYELAYAEAKRRIPKGDRICQIGFGAGFNCNT 290 (329)
Q Consensus 250 ~GNtsSaSi~~~La~~~~kgrlk~GDrV~~iafGsGf~~~s 290 (329)
.|.-++.|-|...+.+++.=.+++||+|+=+|-|+||..+.
T Consensus 49 i~~~~~is~P~~~a~~l~~L~l~pg~~VLeIGtGsGY~aAl 89 (209)
T PF01135_consen 49 IGCGQTISAPSMVARMLEALDLKPGDRVLEIGTGSGYQAAL 89 (209)
T ss_dssp EETTEEE--HHHHHHHHHHTTC-TT-EEEEES-TTSHHHHH
T ss_pred ecceeechHHHHHHHHHHHHhcCCCCEEEEecCCCcHHHHH
Confidence 34447778888888888877799999999999999987654
No 168
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=70.85 E-value=10 Score=36.91 Aligned_cols=45 Identities=13% Similarity=0.216 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCC
Q 043382 101 DVIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRS 149 (329)
Q Consensus 101 ~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~ 149 (329)
..+.++++++|+++|++++|||.+++.. +.+.+-..+.++||++.
T Consensus 208 ~~~~~~~~~~L~~~gl~~~did~~i~Hq----~~~~~~~~~~~~lgl~~ 252 (345)
T TIGR00748 208 HHVVTAAKGLMEKLGLTPEDFDYAVFHQ----PNGKFYLVAARMLGFPK 252 (345)
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEEeCC----CChHHHHHHHHHcCCCH
Confidence 3445889999999999999999988753 33335556899999975
No 169
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones]
Probab=70.02 E-value=8.9 Score=37.76 Aligned_cols=80 Identities=21% Similarity=0.167 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCEEEEeccCCC-CCCchHHHHHHHcCCCCCcceecccch------HHHhcC-C-CCeEE
Q 043382 101 DVIIGAIDERLAKTGFKHKDIGILVVNSSLFN-PTPSLSAFIVNHYKLRSNILSYNLGAL------QSAQVQ-P-NSYTL 171 (329)
Q Consensus 101 ~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~-~~Ps~aa~I~~~Lglr~~v~~~dl~g~------~lL~a~-~-~~~aL 171 (329)
+-+...++++|+++|++.+|||+|-+.....- +.=......++.|-+.-+.+-+-++.+ .++..+ . .--+|
T Consensus 52 e~i~~li~~al~eA~~~~~dID~IA~T~gPGL~gaL~VG~~~Ak~LA~a~~kPli~VnH~~gHi~a~~l~~~~~~p~v~L 131 (342)
T COG0533 52 ENIPPLIEEALAEAGVSLEDIDAIAVTAGPGLGGALLVGATAAKALALALNKPLIPVNHLEGHIEAARLETGLAFPPVAL 131 (342)
T ss_pred HHHHHHHHHHHHHcCCCcccCCEEEEecCCCchhHHHHHHHHHHHHHHHhCCCEeecchHHHHHHHHHhccCCCCCcEEE
Confidence 34467899999999999999999877665532 222234455555555555667777777 455444 2 34588
Q ss_pred EEeecCCCC
Q 043382 172 VVSTENITL 180 (329)
Q Consensus 172 VVs~E~~S~ 180 (329)
+||+-....
T Consensus 132 lVSGGHTql 140 (342)
T COG0533 132 LVSGGHTQL 140 (342)
T ss_pred EEecCceEE
Confidence 999877663
No 170
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=69.72 E-value=9.4 Score=37.78 Aligned_cols=50 Identities=18% Similarity=0.141 Sum_probs=38.3
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCcceecccch
Q 043382 104 IGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSYNLGAL 159 (329)
Q Consensus 104 ~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~ 159 (329)
..|+++|++++|++|+|||++ ...-.......+..+.||+.+ ..+|.+|.
T Consensus 283 ~~a~~~a~~~agi~~~did~~----e~~d~Fa~~~~~~~e~lG~~~--~pvN~~GG 332 (382)
T PRK07801 283 IPATRYALEKTGLSIDDIDVV----EINEAFAPVVLAWLKETGADP--AKVNPNGG 332 (382)
T ss_pred HHHHHHHHHHcCCCHHHcCEe----eecccchHHHHHHHHHhCCCc--hhcCCCcc
Confidence 468999999999999999988 333344455666788899864 46888877
No 171
>PRK04262 hypothetical protein; Provisional
Probab=68.78 E-value=11 Score=36.65 Aligned_cols=45 Identities=20% Similarity=0.277 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCC
Q 043382 101 DVIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRS 149 (329)
Q Consensus 101 ~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~ 149 (329)
..+.++++++|+++|++++|||.+++. ++.+.+-..++++||++.
T Consensus 209 ~~~~~~i~~~L~~~gl~~~dId~~v~H----q~n~~~~~~~~~~Lgl~~ 253 (347)
T PRK04262 209 KHIISAAKGLMEKLGLKPSDYDYAVFH----QPNGKFPLRVAKMLGFTK 253 (347)
T ss_pred HHHHHHHHHHHHHhCcCHHHhceeecC----CCchHHHHHHHHHcCCCH
Confidence 345678999999999999999988776 334445567899999975
No 172
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=68.31 E-value=8.1 Score=38.55 Aligned_cols=50 Identities=14% Similarity=0.263 Sum_probs=35.1
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCcceecccch
Q 043382 104 IGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSYNLGAL 159 (329)
Q Consensus 104 ~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~ 159 (329)
..|++++|+++|++|+|||++= ..-.......+-.+.||+.. ..+|++|.
T Consensus 298 ~~a~~~al~~agl~~~Did~~e----i~d~fa~~~l~~~e~lg~~~--~~vN~~GG 347 (397)
T PRK06954 298 VGAIRKLFEKNGWRAAEVDLFE----INEAFAVVTMAAMKEHGLPH--EKVNVNGG 347 (397)
T ss_pred HHHHHHHHHHcCCCHHHCCEEe----hhhHHHHHHHHHHHHhCCCc--ccCCcCCC
Confidence 6799999999999999999883 22222233334457788853 46677777
No 173
>TIGR00329 gcp_kae1 metallohydrolase, glycoprotease/Kae1 family. This subfamily includes the well-studied secreted O-sialoglycoprotein endopeptidase (glycoprotease, EC 3.4.24.57) of Pasteurella haemolytica, a pathogen. A member from Riemerella anatipestifer, associated with cohemolysin activity, likewise is exported without benefit of a classical signal peptide and shows glycoprotease activity on the test substrate glycophorin. However, archaeal members of this subfamily show unrelated activities as demonstrated in Pyrococcus abyssi: DNA binding, iron binding, apurinic endonuclease activity, genomic association with a kinase domain, and no glycoprotease activity. This family thus pulls together a set of proteins as a homology group that appears to be near-universal in life, yet heterogeneous in assayed function between bacteria and archaea.
Probab=67.86 E-value=10 Score=36.45 Aligned_cols=78 Identities=12% Similarity=0.105 Sum_probs=48.5
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCC-chHHHHHHHcCCCCCcceecccch------HHHhcC--C-CCe
Q 043382 100 DDVIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTP-SLSAFIVNHYKLRSNILSYNLGAL------QSAQVQ--P-NSY 169 (329)
Q Consensus 100 ~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~P-s~aa~I~~~Lglr~~v~~~dl~g~------~lL~a~--~-~~~ 169 (329)
.+.....++++|+++|++++|||.+.+.......+. ..+...++.|..--+++.+.++.. .++.++ . .--
T Consensus 49 ~~~l~~~i~~~l~~~~~~~~did~iav~~GPG~~tglrvg~~~Ak~la~~~~~p~~~v~hl~~ha~~a~~~s~~~~~~~l 128 (305)
T TIGR00329 49 AENIPPLLERALIESNVDKSEIDLIAYTQGPGLGGSLRVGATFARSLALSLDKPLIGVNHLLGHIYAPRLDTNILQFPFV 128 (305)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCchhhHHHHHHHHHHHHHHhCCCEeecccHHHHHHHhhhhcCCCCCCcE
Confidence 345578899999999999999999999987754333 222233444433334455555544 455555 2 233
Q ss_pred EEEEeecC
Q 043382 170 TLVVSTEN 177 (329)
Q Consensus 170 aLVVs~E~ 177 (329)
+|+|++-.
T Consensus 129 ~l~vsGG~ 136 (305)
T TIGR00329 129 SLLVSGGH 136 (305)
T ss_pred EEEEcCCc
Confidence 57777643
No 174
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=67.44 E-value=8.1 Score=37.88 Aligned_cols=45 Identities=13% Similarity=0.042 Sum_probs=35.3
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEe-ccCCCCCCchHHHHHHHcCC
Q 043382 103 IIGAIDERLAKTGFKHKDIGILVVN-SSLFNPTPSLSAFIVNHYKL 147 (329)
Q Consensus 103 ~~~Aa~~aL~kagv~p~dId~LVv~-ss~~~~~Ps~aa~I~~~Lgl 147 (329)
...|++++|+++|++|+|||.+-.. |.+..--+.-..-|.+-||-
T Consensus 208 ~~~ai~~AL~~Agl~p~dIdyIeaHgtgT~~~D~~E~~Ai~~~fg~ 253 (342)
T PRK14691 208 AYRAMKIALRQAGITPEQVQHLNAHATSTPVGDLGEINAIKHLFGE 253 (342)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecCCCCcCCCHHHHHHHHHHhCC
Confidence 4789999999999999999987666 55555566667777777764
No 175
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=67.33 E-value=9.7 Score=37.74 Aligned_cols=50 Identities=20% Similarity=0.279 Sum_probs=34.9
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCcceecccch
Q 043382 104 IGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSYNLGAL 159 (329)
Q Consensus 104 ~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~ 159 (329)
..|++++++++|++|+|||.+=+. -..+...-+..+.||+. -..+|.+|.
T Consensus 289 ~~a~~~a~~~Agi~~~did~~e~~----d~fa~~~~~~~e~lG~~--~~pvn~~GG 338 (386)
T TIGR01930 289 VPAIPKALKKAGLSISDIDLFEIN----EAFAAQVLACIKELGLD--LEKVNVNGG 338 (386)
T ss_pred HHHHHHHHHHcCCCHHHCCeeehc----chhHHHHHHHHHHhCCC--hhhcCCCCC
Confidence 589999999999999999988333 22234444556888884 224566665
No 176
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=66.41 E-value=10 Score=37.87 Aligned_cols=52 Identities=19% Similarity=0.159 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCcceecccch
Q 043382 102 VIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSYNLGAL 159 (329)
Q Consensus 102 l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~ 159 (329)
-...|+++||+++|++|+|||++=+ .-......-...+.||+.. ..+|.+|.
T Consensus 298 ~~~~A~~~al~~Agi~~~did~~ei----~D~f~~~~l~~~e~lg~~~--~~vN~~GG 349 (399)
T PRK09052 298 GPIEAIPAALKQAGLKQDDLDWIEL----NEAFAAQSLAVIRDLGLDP--SKVNPLGG 349 (399)
T ss_pred hHHHHHHHHHHHcCCCHHHcCEEEe----CcHHHHHHHHHHHHhCCCC--cccCCCCc
Confidence 4478999999999999999998852 2234455556678888853 24455554
No 177
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=66.39 E-value=9.9 Score=37.92 Aligned_cols=52 Identities=25% Similarity=0.293 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCcceecccch
Q 043382 102 VIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSYNLGAL 159 (329)
Q Consensus 102 l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~ 159 (329)
-...|++++|+++|++|+|||++-++ ...+...-+-.+.||+.. ..+|.+|.
T Consensus 290 ~~~~a~~~al~~agl~~~did~~ei~----d~f~~~~l~~~e~lg~~~--~~vN~~GG 341 (391)
T PRK07661 290 GPIAAIPKALKLAGLELSDIGLFELN----EAFASQSIQVIRELGLDE--EKVNVNGG 341 (391)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEeC----CHHHHHHHHHHHHcCCCC--CCCCCCCC
Confidence 34689999999999999999998733 234444445557888852 35677666
No 178
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=65.58 E-value=3.9 Score=34.30 Aligned_cols=50 Identities=16% Similarity=0.216 Sum_probs=35.1
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCcceecccch
Q 043382 104 IGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSYNLGAL 159 (329)
Q Consensus 104 ~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~ 159 (329)
..|++++|+++|++++|||.+=++= ..-+..-...+.||+.. ..+|.+|.
T Consensus 25 ~~A~~~al~~ag~~~~did~~Ei~E----aFA~~~l~~~~~lg~~~--~~vN~~GG 74 (123)
T PF02803_consen 25 VPAARKALERAGLTPDDIDVIEINE----AFAAQVLAFLEALGLDP--EKVNPNGG 74 (123)
T ss_dssp HHHHHHHHHHHT--GGGESEEEE------SBHHHHHHHHHHHTTGG--GGBSTT--
T ss_pred HHHHHHHHHHhCCCccccchhhccc----hhhhHHHHhhccccccc--cccCcccc
Confidence 6899999999999999999886552 23445567788899963 67888887
No 179
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=65.42 E-value=14 Score=36.11 Aligned_cols=45 Identities=13% Similarity=0.135 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHhcCCCCCCcCEEEEe-ccCCCCCCchHHHHHHHcC
Q 043382 102 VIIGAIDERLAKTGFKHKDIGILVVN-SSLFNPTPSLSAFIVNHYK 146 (329)
Q Consensus 102 l~~~Aa~~aL~kagv~p~dId~LVv~-ss~~~~~Ps~aa~I~~~Lg 146 (329)
-..+|.+++|+++|++|+|||.|+.. +.+.+--..-+..+.+-++
T Consensus 235 gl~~ai~~AL~~agl~~~dId~v~ah~~gt~~~d~~e~~A~~~~f~ 280 (348)
T PRK06147 235 GLTQAIRAALAEAGCGLEDMDYRIADLNGEQYRFKEAALAEMRLFR 280 (348)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEcCCCCCccchHHHHHHHHHHhh
Confidence 34789999999999999999998776 3333222222333444454
No 180
>COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases [Posttranslational modification, protein turnover, chaperones]
Probab=65.24 E-value=26 Score=34.83 Aligned_cols=69 Identities=14% Similarity=0.190 Sum_probs=51.1
Q ss_pred hhHHHHHhhchHHHHHHHHHHHHhcCCCCCCcCEEEEeccC--CCCCCc--------hHHHHHHHcCCCC--Ccceeccc
Q 043382 90 RHMKEAKKETDDVIIGAIDERLAKTGFKHKDIGILVVNSSL--FNPTPS--------LSAFIVNHYKLRS--NILSYNLG 157 (329)
Q Consensus 90 ~~ma~~~~ea~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~--~~~~Ps--------~aa~I~~~Lglr~--~v~~~dl~ 157 (329)
..+++.+++-..+-.+|+..++++.++.|+||+.|-+.-.| ..|.+. ...+|+++.|++. |.++=|+.
T Consensus 62 ~~~~~l~~~l~~~~a~av~~ll~~~~l~~~~i~~iG~HGQTV~H~p~~~~~~t~Qlgd~~~iA~~TGi~~v~dfR~~D~a 141 (371)
T COG2377 62 AELAELDRALALLHAQAVAALLAEQGLLPRDIRAIGCHGQTVLHRPPGHAPDTVQLGDGPLIAELTGITVVGDFRRRDMA 141 (371)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHhCceeecCCccccCCCCCCCCceeecCchHHHHHHhCCccHhhhcccccc
Confidence 34566667778888999999999999999999988887666 233222 4789999999974 33344544
Q ss_pred c
Q 043382 158 A 158 (329)
Q Consensus 158 g 158 (329)
.
T Consensus 142 ~ 142 (371)
T COG2377 142 A 142 (371)
T ss_pred c
Confidence 3
No 181
>PLN02287 3-ketoacyl-CoA thiolase
Probab=65.16 E-value=10 Score=38.72 Aligned_cols=51 Identities=18% Similarity=0.204 Sum_probs=36.5
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCcceecccch
Q 043382 103 IIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSYNLGAL 159 (329)
Q Consensus 103 ~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~ 159 (329)
...|++++|+++|++|+|||++=++ -......-+-.+.||+.. ..+|++|.
T Consensus 333 ~~~A~~~al~~Agl~~~DID~~Ei~----daFa~~~l~~~e~lG~~~--~pvN~sGG 383 (452)
T PLN02287 333 PAVAIPAAVKAAGLELDDIDLFEIN----EAFASQFVYCCKKLGLDP--EKVNVNGG 383 (452)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEec----chHHHHHHHHHHHcCCCc--cccCCCCc
Confidence 3689999999999999999998433 233334444567888853 46777776
No 182
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=64.87 E-value=10 Score=36.98 Aligned_cols=44 Identities=9% Similarity=0.027 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCC
Q 043382 102 VIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRS 149 (329)
Q Consensus 102 l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~ 149 (329)
-...|++++|+++|++++|||++=++. ..+...-+..+.||+..
T Consensus 252 ~~~~a~~~al~~Agl~~~did~~ei~d----~F~~~~l~~~e~lGl~~ 295 (375)
T cd00829 252 AARLAARRAYKMAGITPDDIDVAELYD----CFTIAELLALEDLGFCE 295 (375)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEecC----cChHHHHHHHHHcCCCC
Confidence 346899999999999999999885543 34556777888899864
No 183
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=64.72 E-value=13 Score=36.83 Aligned_cols=51 Identities=18% Similarity=0.159 Sum_probs=38.0
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCcceecccch
Q 043382 103 IIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSYNLGAL 159 (329)
Q Consensus 103 ~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~ 159 (329)
...|++++|+++|++|+|||.+..+ ...........++||+.. ..+|.+|.
T Consensus 260 ~~~a~~~al~~Agl~~~Did~~ei~----eafa~~~~~~~e~lgl~~--~~vn~~GG 310 (361)
T PRK06690 260 PIFAVNKLLNEMNMKVEDIDYFEIN----EAFASKVVACAKELQIPY--EKLNVNGG 310 (361)
T ss_pred HHHHHHHHHHHcCCCHHHcCEeeec----chhHHHHHHHHHhcCCCc--hhcccCCc
Confidence 4789999999999999999998653 344555666778888853 35666644
No 184
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=63.07 E-value=22 Score=35.32 Aligned_cols=53 Identities=17% Similarity=0.223 Sum_probs=38.0
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCc-ceecccch
Q 043382 103 IIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNI-LSYNLGAL 159 (329)
Q Consensus 103 ~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v-~~~dl~g~ 159 (329)
...|++++++++|++|+|||.+=++ .......-+..+.||+-+.- ..+|.+|.
T Consensus 282 ~~~a~~~al~~AGi~p~DId~~Ei~----daFa~~~l~~~e~lg~~~~g~~~vN~~GG 335 (385)
T TIGR02445 282 PVPATQKALKRAGLSISDIDVFELN----EAFAAQALPCLKDLGLLDKMDEKVNLNGG 335 (385)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEEc----cccHHHHHHHHHHcCCCCCCCCCcCCCCc
Confidence 3678999999999999999987543 33445556677888973221 36677776
No 185
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=62.79 E-value=13 Score=38.36 Aligned_cols=83 Identities=20% Similarity=0.238 Sum_probs=50.1
Q ss_pred HHhhchHHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchH--HHHHHHcCCCCCcceecccch------HHHhcCC
Q 043382 95 AKKETDDVIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLS--AFIVNHYKLRSNILSYNLGAL------QSAQVQP 166 (329)
Q Consensus 95 ~~~ea~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~a--a~I~~~Lglr~~v~~~dl~g~------~lL~a~~ 166 (329)
.+..++.+. .+++++|+++|++++|||.|.|...... .+++- ...++.|...-+++.+.++.+ .++.++.
T Consensus 45 ~~~H~~~l~-~~i~~~l~~~~~~~~~id~iav~~gPg~-~~~l~vg~~~ak~la~~~~~~~~~v~h~~aH~~~a~~~~~~ 122 (535)
T PRK09605 45 AEHHAEAIP-KVIKEALEEAGLKPEDIDLVAFSQGPGL-GPCLRVVATAARALALSLDVPLIGVNHCVAHVEIGRLTTGA 122 (535)
T ss_pred HHHHHHHHH-HHHHHHHHHcCCCHhhCCEEEECCCCCc-HhhHHHHHHHHHHHHHHhCCCeecccHHHHHHHHhhhccCC
Confidence 455556555 9999999999999999999988766543 22332 112333333333445556655 4554432
Q ss_pred -CCeEEEEeecCCC
Q 043382 167 -NSYTLVVSTENIT 179 (329)
Q Consensus 167 -~~~aLVVs~E~~S 179 (329)
..-+|+|++-..+
T Consensus 123 ~~~l~l~vsGg~t~ 136 (535)
T PRK09605 123 EDPVTLYVSGGNTQ 136 (535)
T ss_pred CCCeEEEEecCCeE
Confidence 2356777776443
No 186
>TIGR03723 bact_gcp putative glycoprotease GCP. This model represents bacterial members of a protein family that is widely distributed. In a few pathogenic species, the protein is exported in a way that may represent an exceptional secondary function. This model plus companion (archaeal) model TIGR03722 together span the prokaryotic member sequences of TIGR00329, a protein family that appears universal in life, and whose broad function is unknown. A member of TIGR03722 has been characterized as a DNA-binding protein with apurinic endopeptidase activity. In contrast, the rare characterized members of the present family show O-sialoglycoprotein endopeptidase (EC. 3.4.24.57) activity after export. These include glycoprotease (gcp) from Pasteurella haemolytica A1 and a cohemolysin from Riemerella anatipestifer (GB|AAG39646.1). The member from Staphylococcus aureus is essential and is related to cell wall dynamics and the modulation of autolysis, but members are also found in the Mycoplasmas
Probab=62.56 E-value=16 Score=35.36 Aligned_cols=60 Identities=20% Similarity=0.149 Sum_probs=40.7
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCc-hHHHHHHHcCCCCCcceecccch
Q 043382 100 DDVIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPS-LSAFIVNHYKLRSNILSYNLGAL 159 (329)
Q Consensus 100 ~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps-~aa~I~~~Lglr~~v~~~dl~g~ 159 (329)
.+.....++++|+++|++++|||.+.++......+.- .+.-+++-|...-+++.+-++.+
T Consensus 50 ~~~l~~~i~~~l~~~~~~~~~id~iav~~GPGsftglrig~~~Ak~la~~~~~p~~~v~h~ 110 (314)
T TIGR03723 50 LEAIPPLIEEALAEAGLTLSDIDAIAVTAGPGLIGALLVGVSFAKALALALNKPLIGVNHL 110 (314)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCChHHhHHHHHHHHHHHHHHhCCCEEecccH
Confidence 4555788999999999999999999999887643332 22234444433334556666665
No 187
>COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=61.59 E-value=19 Score=33.08 Aligned_cols=61 Identities=18% Similarity=0.210 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHhcCCCCCCcCEEEEeccCCCC-CCchHHHHHHHcCCCCCcceecccchHHH
Q 043382 102 VIIGAIDERLAKTGFKHKDIGILVVNSSLFNP-TPSLSAFIVNHYKLRSNILSYNLGALQSA 162 (329)
Q Consensus 102 l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~-~Ps~aa~I~~~Lglr~~v~~~dl~g~~lL 162 (329)
.....++++|.++|++++|||.|+|++..+.. -=-.+.-+++-|.+.-+++.+.++.-..+
T Consensus 40 ~l~~~i~~ll~~~~~~~~dld~iav~~GPGSFTGlRIG~~~AkgLA~~l~iplvgvssL~~~ 101 (220)
T COG1214 40 RLMPMIDELLKEAGLSLQDLDAIAVAKGPGSFTGLRIGVAFAKGLALALNIPLVGVSSLEAL 101 (220)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEccCCCcccchhhHHHHHHHHHHHcCCCEEEeCHHHHH
Confidence 34778999999999999999999999988533 33355556666777767888888777333
No 188
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=60.91 E-value=9.4 Score=37.54 Aligned_cols=45 Identities=13% Similarity=0.112 Sum_probs=34.0
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEe-ccCCCCCCchHHHHHHHcCC
Q 043382 103 IIGAIDERLAKTGFKHKDIGILVVN-SSLFNPTPSLSAFIVNHYKL 147 (329)
Q Consensus 103 ~~~Aa~~aL~kagv~p~dId~LVv~-ss~~~~~Ps~aa~I~~~Lgl 147 (329)
..+|++++|+++|++|+|||.+... |.+..--+.-...+.+.++-
T Consensus 277 ~~~ai~~Al~~Agi~~~dId~ve~h~tgt~~~D~~E~~a~~~~~~~ 322 (407)
T TIGR03150 277 AARAMRAALKDAGINPEDVDYINAHGTSTPLGDKAETKAIKRVFGD 322 (407)
T ss_pred HHHHHHHHHHHcCCCHhHCCEEeCcCCCCCCCCHHHHHHHHHHhcc
Confidence 4689999999999999999998766 55554455556666666654
No 189
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=60.76 E-value=12 Score=37.35 Aligned_cols=50 Identities=22% Similarity=0.258 Sum_probs=38.7
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCcceecccch
Q 043382 104 IGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSYNLGAL 159 (329)
Q Consensus 104 ~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~ 159 (329)
..|++++++++|++|+|||++=++ ...+...-+..+.||+.+. .+|.+|.
T Consensus 291 ~~a~~~a~~~agl~~~Did~~Ei~----d~Fa~~~l~~~e~lG~~~~--pvN~~GG 340 (390)
T PRK06504 291 LPATERALKKAGMKIDDIDLYEVN----EAFASVPLAWLKATGADPE--RLNVNGG 340 (390)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEec----ccchHHHHHHHHHhCCCCC--CcCCCCc
Confidence 569999999999999999988544 2344555577899999743 5888887
No 190
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=60.40 E-value=20 Score=35.72 Aligned_cols=53 Identities=19% Similarity=0.229 Sum_probs=39.0
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCc-ceecccch
Q 043382 103 IIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNI-LSYNLGAL 159 (329)
Q Consensus 103 ~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v-~~~dl~g~ 159 (329)
...|++++++++|++|+|||.+=++ ...+...-+-.+.||+-+.. ..+|.+|.
T Consensus 284 ~~~a~~~al~~Agl~~~DId~~El~----d~F~~~~l~~~e~lg~~~~~~~~vN~~GG 337 (387)
T PRK08947 284 PVPATQKALKRAGLSISDIDVFELN----EAFAAQSLPCLKDLGLLDKMDEKVNLNGG 337 (387)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEec----ccchHHHHHHHHHcCCCCCCCCCcCCCCc
Confidence 3678999999999999999988543 34555666777889984321 36777776
No 191
>TIGR03725 bact_YeaZ universal bacterial protein YeaZ. This family describes a protein family, YeaZ, that appears to be universal in bacteria, but whose function is unknown. This family is related to the gcp (glycoprotease) protein family, also universal in bacteria and unknown in function. In Gram-positive lineages, members of these two related families often belong to the same operon, along with the ribosomal-protein-alanine acetyltransferase gene. Members of this family may occur as fusions with gcp or the ribosomal protein N-acetyltransferase rimI, and is frequently encoded next to rimI.
Probab=60.05 E-value=8.5 Score=34.62 Aligned_cols=64 Identities=17% Similarity=0.226 Sum_probs=44.2
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCc-hHHHHHHHcCCCCCcceecccchHHHh
Q 043382 100 DDVIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPS-LSAFIVNHYKLRSNILSYNLGALQSAQ 163 (329)
Q Consensus 100 ~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps-~aa~I~~~Lglr~~v~~~dl~g~~lL~ 163 (329)
.+.....++++|+++|++++|||.++++...+..|.- .+..++.-|....+++.+.++....+.
T Consensus 34 ~~~l~~~i~~~l~~~~~~~~~i~~iav~~GPGSfTGlRig~~~akgla~~~~~p~~~vssL~~lA 98 (202)
T TIGR03725 34 SEILLPMIEELLAEAGLSLQDLDAIAVGVGPGSFTGLRIGLATAKGLALALGIPLVGVSSLEALA 98 (202)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCChHHhHHHHHHHHHHHHHHhCCCEEecCHHHHHH
Confidence 4555789999999999999999999999887655442 333344444433356677777774443
No 192
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=59.51 E-value=30 Score=31.25 Aligned_cols=47 Identities=13% Similarity=0.075 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCEEEEecc-CCCCCCchHHHHHHHcCC
Q 043382 101 DVIIGAIDERLAKTGFKHKDIGILVVNSS-LFNPTPSLSAFIVNHYKL 147 (329)
Q Consensus 101 ~l~~~Aa~~aL~kagv~p~dId~LVv~ss-~~~~~Ps~aa~I~~~Lgl 147 (329)
....++++++|+++|++++|||.++.... +...............+.
T Consensus 145 ~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~~~~~~~~~~~~~~~~ 192 (254)
T cd00327 145 EGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGV 192 (254)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEccCCcCccccHHHHHHHHHHhCC
Confidence 44578899999999999999999887643 333333333333344344
No 193
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=57.43 E-value=44 Score=37.90 Aligned_cols=79 Identities=11% Similarity=0.040 Sum_probs=56.7
Q ss_pred chHHHHHHHHHHHHhcCCCCCCcC----EEEEeccC-CCCCCc-------------------hHHHHHHHcCCCCCccee
Q 043382 99 TDDVIIGAIDERLAKTGFKHKDIG----ILVVNSSL-FNPTPS-------------------LSAFIVNHYKLRSNILSY 154 (329)
Q Consensus 99 a~~l~~~Aa~~aL~kagv~p~dId----~LVv~ss~-~~~~Ps-------------------~aa~I~~~Lglr~~v~~~ 154 (329)
-.-+..+.+-++||++|+.|+.+. .|..+++. +|.... .+.+|...|++++....+
T Consensus 91 QqRllLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~Risy~l~l~GPs~~v 170 (1061)
T COG3321 91 QQRLLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAGRISYVLGLSGPSVTV 170 (1061)
T ss_pred hHhHHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHHHHHHHHHhcCCCCCccc
Confidence 355889999999999999998887 45555444 544332 677889999999877777
Q ss_pred cccch----------HHHhcCCCCeEEEEeecC
Q 043382 155 NLGAL----------QSAQVQPNSYTLVVSTEN 177 (329)
Q Consensus 155 dl~g~----------~lL~a~~~~~aLVVs~E~ 177 (329)
|-.+. +.|+.|....||+=+...
T Consensus 171 dtaCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l 203 (1061)
T COG3321 171 DTACSSSLVAVHLACQSLRLGECDLALAGGVNL 203 (1061)
T ss_pred cchhhHHHHHHHHHHHHHHcCCCCEEEecceEe
Confidence 77765 566677766666554443
No 194
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=57.39 E-value=39 Score=33.77 Aligned_cols=78 Identities=15% Similarity=0.251 Sum_probs=56.4
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCC-----CCccee-cccch----------HHHh
Q 043382 100 DDVIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLR-----SNILSY-NLGAL----------QSAQ 163 (329)
Q Consensus 100 ~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr-----~~v~~~-dl~g~----------~lL~ 163 (329)
-.....|+++.++|.|.+|+|.|.+|+.. |.|-+...++..++.+ +..... .++++ .+|.
T Consensus 208 ~~~~~~a~~~~~~k~gls~~dfdy~vfH~----P~~k~~~ka~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~Las~L~ 283 (377)
T COG3425 208 FKHVENAAKGYMEKTGLSPDDFDYIVFHQ----PNGKFPKKAAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGLASLLD 283 (377)
T ss_pred HHHHHHHHHHHHHHhCCChhhhCeEEecC----CCCchHHHHHHHhCccHhhcCccchhhhhcCcccchhHHHHHHHHHh
Confidence 46678899999999999999999998754 7777788888888876 222222 35555 3443
Q ss_pred -cC-CCCeEEEEeecCCCCCccccCCCcc
Q 043382 164 -VQ-PNSYTLVVSTENITLGLYTGNDRSI 190 (329)
Q Consensus 164 -a~-~~~~aLVVs~E~~S~~~~~Gd~~sa 190 (329)
+. +++++|+++ +|.|+.+
T Consensus 284 ~a~~~G~rIl~~S---------YGSGa~s 303 (377)
T COG3425 284 NAKLPGDRILLFS---------YGSGAGS 303 (377)
T ss_pred hcCCCCCEEEEEe---------eCCCcce
Confidence 34 578888887 4777764
No 195
>PTZ00340 O-sialoglycoprotein endopeptidase-like protein; Provisional
Probab=56.05 E-value=24 Score=34.84 Aligned_cols=79 Identities=16% Similarity=0.130 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCEEEEeccCCC-CCCchHHHHHHHcCCCCCcceecccch------HHHhcC-CCCeEEE
Q 043382 101 DVIIGAIDERLAKTGFKHKDIGILVVNSSLFN-PTPSLSAFIVNHYKLRSNILSYNLGAL------QSAQVQ-PNSYTLV 172 (329)
Q Consensus 101 ~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~-~~Ps~aa~I~~~Lglr~~v~~~dl~g~------~lL~a~-~~~~aLV 172 (329)
+.....++++|+++|++++|||.+.|...... +.=-.....+.-|...-+++-+-++.+ .++... ..--+|+
T Consensus 51 ~~l~~~i~~~l~~a~~~~~did~Iavt~GPGl~~~LrVG~~~Ak~LA~a~~~PligV~HlegHi~a~~l~~~~~~Pl~Ll 130 (345)
T PTZ00340 51 EHILSLVKEALEEAKITPSDISLICYTKGPGMGAPLSVGAVVARTLSLLWGKPLVGVNHCVAHIEMGRLVTGAENPVVLY 130 (345)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcHhhHHHHHHHHHHHHHHcCCCEeecchHHHHHHHHhhccCCCCCeEEE
Confidence 34467889999999999999999988766542 222223334555554445667777777 334222 1127888
Q ss_pred EeecCCC
Q 043382 173 VSTENIT 179 (329)
Q Consensus 173 Vs~E~~S 179 (329)
||+-...
T Consensus 131 VSGGhT~ 137 (345)
T PTZ00340 131 VSGGNTQ 137 (345)
T ss_pred EeCCceE
Confidence 8887665
No 196
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=55.96 E-value=12 Score=37.00 Aligned_cols=47 Identities=23% Similarity=0.199 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCEEEEe-ccCCCCCCchHHHHHHHcCC
Q 043382 101 DVIIGAIDERLAKTGFKHKDIGILVVN-SSLFNPTPSLSAFIVNHYKL 147 (329)
Q Consensus 101 ~l~~~Aa~~aL~kagv~p~dId~LVv~-ss~~~~~Ps~aa~I~~~Lgl 147 (329)
.-..+|++++|+++|++|+|||.+... +++..--+.-+..+.+-++-
T Consensus 274 ~~~~~a~~~Al~~Agi~~~dId~i~~hgtgt~~~D~~E~~ai~~~~~~ 321 (407)
T cd00828 274 KGIARAIRTALAKAGLSLDDLDVISAHGTSTPANDVAESRAIAEVAGA 321 (407)
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEecccccCccccHHHHHHHHHHHhc
Confidence 445789999999999999999998766 55544445555555555554
No 197
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=55.87 E-value=20 Score=35.11 Aligned_cols=83 Identities=13% Similarity=0.134 Sum_probs=58.6
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHH-HHHcCCCCCcceeccc--ch----------HHHhcCC
Q 043382 100 DDVIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFI-VNHYKLRSNILSYNLG--AL----------QSAQVQP 166 (329)
Q Consensus 100 ~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I-~~~Lglr~~v~~~dl~--g~----------~lL~a~~ 166 (329)
.++...+.+..+++++++|+.|+-+++.+.+..-.-...+.+ +-.-|++..++..-++ +. .-|++|.
T Consensus 62 DeLl~~vl~a~ie~t~~dp~~igdi~vG~vL~pg~ga~e~R~a~~~ag~P~tvpv~tvNRqCsSGLqaVadiA~~Ir~G~ 141 (435)
T KOG1389|consen 62 DELLAAVLRAVIEKTNLDPSLIGDIVVGTVLAPGSGASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADIAAKIRAGF 141 (435)
T ss_pred HHHHHHHHHHHHhhcCCCHHHhcceeeeeccCCCcchHHHHHHHHHcCCCcccchhhhhhhhhhHHHHHHHHHHHHhcCc
Confidence 456688899999999999999999999987732222444444 4445776544433333 22 5577888
Q ss_pred CCeEEEEeecCCCCCc
Q 043382 167 NSYTLVVSTENITLGL 182 (329)
Q Consensus 167 ~~~aLVVs~E~~S~~~ 182 (329)
+.-.|-.+.|.+|.++
T Consensus 142 ydIGla~GvESMt~~~ 157 (435)
T KOG1389|consen 142 YDIGLAAGVESMTTNY 157 (435)
T ss_pred eeeecccchhhhcccC
Confidence 8889999999998754
No 198
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=55.68 E-value=10 Score=37.13 Aligned_cols=32 Identities=25% Similarity=0.342 Sum_probs=27.5
Q ss_pred hhchHHHHHHHHHHHHhcCCCCCCcCEEEEec
Q 043382 97 KETDDVIIGAIDERLAKTGFKHKDIGILVVNS 128 (329)
Q Consensus 97 ~ea~~l~~~Aa~~aL~kagv~p~dId~LVv~s 128 (329)
+++...+.++++++|+++|++++|||.+++.-
T Consensus 267 ~~~~~~~~~~i~~~L~~~gl~~~dId~~~~Hq 298 (372)
T PRK07515 267 KEVCPMVAEHIVEHLAENGLTPADVKRFWLHQ 298 (372)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECC
Confidence 45566778999999999999999999998763
No 199
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=54.97 E-value=18 Score=36.18 Aligned_cols=46 Identities=9% Similarity=0.004 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCEEEEe-ccCCCCCCchHHHHHHHcCC
Q 043382 101 DVIIGAIDERLAKTGFKHKDIGILVVN-SSLFNPTPSLSAFIVNHYKL 147 (329)
Q Consensus 101 ~l~~~Aa~~aL~kagv~p~dId~LVv~-ss~~~~~Ps~aa~I~~~Lgl 147 (329)
.-+.+|.++||+++|+ |+|||.|... |+|..--..-+..|.+.++.
T Consensus 280 ~~~~~am~~AL~~Agl-~~~IdyI~ahgtgT~~~D~~E~~Ai~~~f~~ 326 (398)
T PRK06519 280 GDLEASLERLLKPAGG-LAAPTAVISGATGAHPATAEEKAALEAALAG 326 (398)
T ss_pred HHHHHHHHHHHHHCCC-cccCCEEEeCCCCCCCccHHHHHHHHHHcCC
Confidence 3457899999999999 8999998766 55555555566667777763
No 200
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=54.62 E-value=14 Score=36.63 Aligned_cols=44 Identities=20% Similarity=0.244 Sum_probs=31.4
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEe-ccCCCCCCchHHHHHHHcC
Q 043382 103 IIGAIDERLAKTGFKHKDIGILVVN-SSLFNPTPSLSAFIVNHYK 146 (329)
Q Consensus 103 ~~~Aa~~aL~kagv~p~dId~LVv~-ss~~~~~Ps~aa~I~~~Lg 146 (329)
..+|++++|+++|++|+|||.+... +.+..--+.-...|.+-+|
T Consensus 262 ~~~a~~~Al~~Agl~~~dId~v~~hgtgt~~~D~~E~~al~~~f~ 306 (392)
T PRK09185 262 AILAMQQALADAGLAPADIGYINLHGTATPLNDAMESRAVAAVFG 306 (392)
T ss_pred HHHHHHHHHHHcCCCHHHccEEEeCCCCCcCCCHHHHHHHHHHhC
Confidence 3589999999999999999998766 4443333444555555554
No 201
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=54.55 E-value=12 Score=37.36 Aligned_cols=45 Identities=16% Similarity=0.157 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHhcCCCCCCcCEEEEe-ccCCCCCCchHHHHHHHcC
Q 043382 102 VIIGAIDERLAKTGFKHKDIGILVVN-SSLFNPTPSLSAFIVNHYK 146 (329)
Q Consensus 102 l~~~Aa~~aL~kagv~p~dId~LVv~-ss~~~~~Ps~aa~I~~~Lg 146 (329)
-..++++++|+++|++|+|||.+... |++..--+.-+..|.+-+|
T Consensus 276 ~~~~ai~~AL~~Agi~p~dId~I~~Hgtgt~~~D~~E~~Ai~~~fg 321 (405)
T PRK09116 276 TMQIAMELALKDAGLAPEDIGYVNAHGTATDRGDIAESQATAAVFG 321 (405)
T ss_pred HHHHHHHHHHHHhCCCHHHcCEEECcCccCCCCCHHHHHHHHHHhC
Confidence 34789999999999999999999766 5665555666666777776
No 202
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=54.26 E-value=14 Score=37.39 Aligned_cols=44 Identities=23% Similarity=0.221 Sum_probs=36.1
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEe-ccCCCCCCchHHHHHHHcCC
Q 043382 104 IGAIDERLAKTGFKHKDIGILVVN-SSLFNPTPSLSAFIVNHYKL 147 (329)
Q Consensus 104 ~~Aa~~aL~kagv~p~dId~LVv~-ss~~~~~Ps~aa~I~~~Lgl 147 (329)
.+|.+.||+++|++|+|||.+-.. |+|..--..-+.-|..-+|=
T Consensus 279 ~~am~~AL~~Agl~~~~idYinaHgTsT~~nD~~E~~ai~~vfg~ 323 (412)
T COG0304 279 IRAMRAALADAGLTPEDIDYINAHGTSTPANDKAESLAIKRVFGE 323 (412)
T ss_pred HHHHHHHHHHcCCCHhHCCEEeCCCccCCCccHHHHHHHHHHhcc
Confidence 799999999999999999999776 77766666666667777774
No 203
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=53.98 E-value=13 Score=36.46 Aligned_cols=47 Identities=19% Similarity=0.156 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCEEEEe-ccCCCCCCchHHHHHHHcCC
Q 043382 101 DVIIGAIDERLAKTGFKHKDIGILVVN-SSLFNPTPSLSAFIVNHYKL 147 (329)
Q Consensus 101 ~l~~~Aa~~aL~kagv~p~dId~LVv~-ss~~~~~Ps~aa~I~~~Lgl 147 (329)
.-..++++++|+++|++++|||.+... +.+..--+.-+.-+.+-++-
T Consensus 275 ~~~~~~i~~al~~agi~~~dId~v~~h~tgt~~~d~~E~~al~~~~~~ 322 (406)
T cd00834 275 EGAARAMRAALADAGLSPEDIDYINAHGTSTPLNDAAESKAIKRVFGE 322 (406)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEecccccCccccHHHHHHHHHHhcc
Confidence 344679999999999999999998877 44444444444455555554
No 204
>PF00814 Peptidase_M22: Glycoprotease family; InterPro: IPR000905 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M22 (clan MK). The type example being O-sialoglycoprotein endopeptidase (3.4.24.57 from EC) from Pasteurella haemolytica (Mannheimia haemolytica). O-Sialoglycoprotein endopeptidase is secreted by the bacterium P. haemolytica, and digests only proteins that are heavily sialylated, in particular those with sialylated serine and threonine residues []. Substrate proteins include glycophorin A and leukocyte surface antigens CD34, CD43, CD44 and CD45 [, ]. Removal of glycosylation, by treatment with neuraminidase, completely negates susceptibility to O-sialoglycoprotein endopeptidase digestion [, ]. Sequence similarity searches have revealed other members of the M22 family, from yeast, Mycobacterium, Haemophilus influenzae and the cyanobacterium Synechocystis []. The zinc-binding and catalytic residues of this family have not been determined, although the motif HMEGH may be a zinc-binding region [].; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 2A6A_A 2GEL_G 2GEM_B 1OKJ_B 3ENO_A 3EN9_B 2VWB_B 3ENH_B 2IVO_D 2IVP_A ....
Probab=53.93 E-value=9.5 Score=35.99 Aligned_cols=63 Identities=19% Similarity=0.204 Sum_probs=40.1
Q ss_pred HhhchHHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCc-hHHHHHHHcCCCCCcceecccch
Q 043382 96 KKETDDVIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPS-LSAFIVNHYKLRSNILSYNLGAL 159 (329)
Q Consensus 96 ~~ea~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps-~aa~I~~~Lglr~~v~~~dl~g~ 159 (329)
|..++.+ ...++++|+++|++++|||.+.++...+.+++= .+...+.-|...-+++.+-++.+
T Consensus 27 r~H~~~L-~~~i~~~l~~~~~~~~did~iavt~GPGsftgLrvG~~~Ak~La~~~~~Pli~v~~l 90 (268)
T PF00814_consen 27 RQHSENL-PPLIEELLKEAGISLSDIDAIAVTRGPGSFTGLRVGLSFAKGLALALNIPLIGVSHL 90 (268)
T ss_dssp HHHHHHH-HHHHHHHHHHHTS-GGGESEEEEEEESS-HHHHHHHHHHHHHHHHHTT--EEEEEHH
T ss_pred HHHHHHH-HHHHHHHHHHcCCCHHHCCEEEEecCCCcccccHHHHHHHHHHHHHhCCCeEeeccH
Confidence 4444444 588999999999999999999999887654432 23334444444345666777766
No 205
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=53.72 E-value=32 Score=33.41 Aligned_cols=74 Identities=9% Similarity=0.098 Sum_probs=49.7
Q ss_pred hhchHHHHHHHHHHHHhc--CCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCC-cc-----eecccch---------
Q 043382 97 KETDDVIIGAIDERLAKT--GFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSN-IL-----SYNLGAL--------- 159 (329)
Q Consensus 97 ~ea~~l~~~Aa~~aL~ka--gv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~-v~-----~~dl~g~--------- 159 (329)
+.+...+.++++++|+++ |++++|||.+++.... +..-..++++||++.+ +. --+.+++
T Consensus 255 ~~~~~~~~~~i~~~L~~~~~g~~~~did~~~~H~~~----~~i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L 330 (361)
T cd00831 255 RLVEKNLERVLRKLLARLGIGLFKLAFDHWCVHPGG----RAVLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVL 330 (361)
T ss_pred HHHHHHHHHHHHHHhccccCCCccccceEEEECCCC----hHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHH
Confidence 344566778899999999 9999999998876543 2334468899999743 21 1123333
Q ss_pred -HHHhcC---CCCeEEEEe
Q 043382 160 -QSAQVQ---PNSYTLVVS 174 (329)
Q Consensus 160 -~lL~a~---~~~~aLVVs 174 (329)
.+++.+ +++++|+++
T Consensus 331 ~~~~~~g~~~~Gd~vll~~ 349 (361)
T cd00831 331 AYMEAKGRVKRGDRGLLIA 349 (361)
T ss_pred HHHHHhCCCCCCCEEEEEE
Confidence 455544 467888877
No 206
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=53.64 E-value=13 Score=35.64 Aligned_cols=28 Identities=21% Similarity=0.311 Sum_probs=25.4
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcCEEEEe
Q 043382 100 DDVIIGAIDERLAKTGFKHKDIGILVVN 127 (329)
Q Consensus 100 ~~l~~~Aa~~aL~kagv~p~dId~LVv~ 127 (329)
-||...|++++++++|++|+||+++=..
T Consensus 271 fdm~~~aa~~l~aksgltpndvqvielh 298 (408)
T KOG1406|consen 271 FDMTRLAAKRLFAKSGLTPNDVQVIELH 298 (408)
T ss_pred chHHHHHHHHHHHHcCCCcccceEEEee
Confidence 5778999999999999999999998766
No 207
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=53.56 E-value=13 Score=37.06 Aligned_cols=45 Identities=16% Similarity=0.022 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHhcCCCCCCcCEEEEe-ccCCCCCCchHHHHHHHcC
Q 043382 102 VIIGAIDERLAKTGFKHKDIGILVVN-SSLFNPTPSLSAFIVNHYK 146 (329)
Q Consensus 102 l~~~Aa~~aL~kagv~p~dId~LVv~-ss~~~~~Ps~aa~I~~~Lg 146 (329)
-..+|++++|+++|++|+|||.+-.. |.+..--+.-...+.+.+|
T Consensus 289 ~~~~a~~~Al~~Agi~p~dId~i~~hgtgt~~~D~~E~~al~~~fg 334 (424)
T PRK06333 289 GARRAMLIALRQAGIPPEEVQHLNAHATSTPVGDLGEVAAIKKVFG 334 (424)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEeccCCCCccchHHHHHHHHHHhC
Confidence 34789999999999999999998665 4444333444555666555
No 208
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=53.51 E-value=17 Score=35.99 Aligned_cols=29 Identities=17% Similarity=0.282 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHhcCCCCCCcCEEEEe-ccC
Q 043382 102 VIIGAIDERLAKTGFKHKDIGILVVN-SSL 130 (329)
Q Consensus 102 l~~~Aa~~aL~kagv~p~dId~LVv~-ss~ 130 (329)
....|++++|+++|++|+|||.+... |++
T Consensus 280 ~~~~a~~~al~~Agl~~~dId~i~~h~tgt 309 (424)
T smart00825 280 AQARLIRQALARAGVDPADVDYVEAHGTGT 309 (424)
T ss_pred HHHHHHHHHHHHhCCCHHHccEEEeeCCCC
Confidence 34789999999999999999999877 444
No 209
>PRK07855 lipid-transfer protein; Provisional
Probab=52.83 E-value=15 Score=36.48 Aligned_cols=42 Identities=12% Similarity=0.165 Sum_probs=32.8
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCC
Q 043382 104 IGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRS 149 (329)
Q Consensus 104 ~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~ 149 (329)
..|+++|++++|++|+|||++= .....+....+..+.||+-+
T Consensus 269 ~~aa~~a~~~AGi~~~DiDv~E----l~D~Ft~~~l~~~E~lG~~~ 310 (386)
T PRK07855 269 GLVARQLWAQSGLGPADIDTAI----LYDHFTPFVLMQLEELGFCG 310 (386)
T ss_pred HHHHHHHHHHcCCCHHHCcEEE----eccCCcHHHHHHHHHcCCCC
Confidence 4799999999999999999873 33345566677778888864
No 210
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=52.77 E-value=14 Score=36.66 Aligned_cols=44 Identities=20% Similarity=0.295 Sum_probs=31.3
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEe-ccCCCCCCchHHHHHHHcC
Q 043382 103 IIGAIDERLAKTGFKHKDIGILVVN-SSLFNPTPSLSAFIVNHYK 146 (329)
Q Consensus 103 ~~~Aa~~aL~kagv~p~dId~LVv~-ss~~~~~Ps~aa~I~~~Lg 146 (329)
..+|++++|+++|++|+|||.+-.. |++..--+.-..-|.+-+|
T Consensus 256 ~~~ai~~Al~~agi~p~dId~i~~hgtgt~~~D~~E~~al~~~fg 300 (381)
T PRK05952 256 AIAAIQQCLARSGLTPEDIDYIHAHGTATRLNDQREANLIQALFP 300 (381)
T ss_pred HHHHHHHHHHHhCCCHHHeeEEEccCCCCCCCcHHHHHHHHHHcC
Confidence 4789999999999999999998766 4444333444444555444
No 211
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=52.34 E-value=18 Score=35.57 Aligned_cols=47 Identities=13% Similarity=0.125 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCEEEEe-ccCCCCCCchHHHHHHHcCC
Q 043382 101 DVIIGAIDERLAKTGFKHKDIGILVVN-SSLFNPTPSLSAFIVNHYKL 147 (329)
Q Consensus 101 ~l~~~Aa~~aL~kagv~p~dId~LVv~-ss~~~~~Ps~aa~I~~~Lgl 147 (329)
.-..+|++++|+++|++++|||.+.+. +.+..--+.-..-|.+-++-
T Consensus 279 ~~~~~a~~~al~~Agi~~~did~i~~hgtgt~~~D~~E~~al~~~f~~ 326 (421)
T cd00833 279 EAQAALIRRAYARAGVDPSDIDYVEAHGTGTPLGDPIEVEALAKVFGG 326 (421)
T ss_pred HHHHHHHHHHHHHhCCCHHHCcEEEeeCCCCCCCCHHHHHHHHHHHhc
Confidence 345789999999999999999999877 44333333333445554443
No 212
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=52.23 E-value=13 Score=37.34 Aligned_cols=44 Identities=20% Similarity=0.205 Sum_probs=31.2
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEe-ccCCCCCCchHHHHHHHcC
Q 043382 103 IIGAIDERLAKTGFKHKDIGILVVN-SSLFNPTPSLSAFIVNHYK 146 (329)
Q Consensus 103 ~~~Aa~~aL~kagv~p~dId~LVv~-ss~~~~~Ps~aa~I~~~Lg 146 (329)
..+|++++|+++|++|+|||.+... |.+....+.-..-|.+.+|
T Consensus 291 ~~~ai~~AL~~agi~p~dId~i~~Hgtgt~~~d~~E~~al~~~~~ 335 (425)
T PRK06501 291 AIGAIRAALADAGLTPEQIDYINAHGTSTPENDKMEYLGLSAVFG 335 (425)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecCccCcchHHHHHHHHHHHhc
Confidence 5689999999999999999999876 4444333444444554444
No 213
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=51.42 E-value=17 Score=36.21 Aligned_cols=47 Identities=15% Similarity=0.216 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCEEEEe-ccCCCCCCchHHHHHHHcCC
Q 043382 101 DVIIGAIDERLAKTGFKHKDIGILVVN-SSLFNPTPSLSAFIVNHYKL 147 (329)
Q Consensus 101 ~l~~~Aa~~aL~kagv~p~dId~LVv~-ss~~~~~Ps~aa~I~~~Lgl 147 (329)
.-..+|.+++|+++|++|+|||.|... |.+..-.+.-+.-|.+-||-
T Consensus 270 ~~~~~a~~~al~~ag~~~~~i~~v~~hgtgt~~~D~~E~~al~~~fg~ 317 (399)
T cd00832 270 PGLARAIRLALADAGLTPEDVDVVFADAAGVPELDRAEAAALAAVFGP 317 (399)
T ss_pred HHHHHHHHHHHHHcCCCHHHccEEEeccCcCCCCCHHHHHHHHHHhCC
Confidence 345789999999999999999988766 55555556666667777775
No 214
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=50.94 E-value=16 Score=36.21 Aligned_cols=44 Identities=16% Similarity=0.158 Sum_probs=31.1
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEe-ccCCCCCCchHHHHHHHcC
Q 043382 103 IIGAIDERLAKTGFKHKDIGILVVN-SSLFNPTPSLSAFIVNHYK 146 (329)
Q Consensus 103 ~~~Aa~~aL~kagv~p~dId~LVv~-ss~~~~~Ps~aa~I~~~Lg 146 (329)
...|+++||+++|++|+|||.+-.. |.+..-.+.-..-+.+-+|
T Consensus 278 ~~~a~~~Al~~agi~~~dId~v~~hgtgt~~~d~~E~~al~~~~~ 322 (411)
T PRK07314 278 AARAMKLALKDAGINPEDIDYINAHGTSTPAGDKAETQAIKRVFG 322 (411)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEccccCCccccHHHHHHHHHHhc
Confidence 3679999999999999999998765 4443434444444555555
No 215
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=50.74 E-value=17 Score=36.38 Aligned_cols=44 Identities=14% Similarity=0.043 Sum_probs=33.8
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEe-ccCCCCCCchHHHHHHHcC
Q 043382 103 IIGAIDERLAKTGFKHKDIGILVVN-SSLFNPTPSLSAFIVNHYK 146 (329)
Q Consensus 103 ~~~Aa~~aL~kagv~p~dId~LVv~-ss~~~~~Ps~aa~I~~~Lg 146 (329)
...|++++|+++|++|+|||.+-.. |.+..--+.-+.-|.+-+|
T Consensus 280 ~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E~~al~~~fg 324 (414)
T PRK08722 280 GALAMEAAMRDAGVTGEQIGYVNAHGTSTPAGDVAEIKGIKRALG 324 (414)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEccCccCCCCCHHHHHHHHHHhc
Confidence 3778999999999999999998666 5555555556666666665
No 216
>PF03702 UPF0075: Uncharacterised protein family (UPF0075); InterPro: IPR005338 Anhydro-N-acetylmuramic acid kinase catalyzes the specific phosphorylation of 1,6-anhydro-N-acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. It is also required for the utilisation of anhMurNAc, either imported from the medium, or derived from its own cell wall murein, and in so doing plays a role in cell wall recycling [, ]. ; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0006040 amino sugar metabolic process, 0009254 peptidoglycan turnover; PDB: 3QBX_B 3QBW_A 3CQY_B.
Probab=50.66 E-value=22 Score=35.32 Aligned_cols=67 Identities=18% Similarity=0.287 Sum_probs=44.3
Q ss_pred hHHHHHhhchHHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCC----------chHHHHHHHcCCCC--Ccceeccc
Q 043382 91 HMKEAKKETDDVIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTP----------SLSAFIVNHYKLRS--NILSYNLG 157 (329)
Q Consensus 91 ~ma~~~~ea~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~P----------s~aa~I~~~Lglr~--~v~~~dl~ 157 (329)
.+++...+..+...+|+++++++++++++|||++=+...|-+-.| +-.+.|+++.|++. |-++-|+.
T Consensus 58 ~~~~l~~~lg~~~a~av~~~l~~~~i~~~~I~~IgsHGQTv~H~P~~~~~~TlQiG~~~~iA~~tgi~vV~DFR~~Dia 136 (364)
T PF03702_consen 58 ELCELDRELGELFADAVNQFLKKNGISPSDIDLIGSHGQTVFHRPEGQHPFTLQIGDPAVIAERTGITVVSDFRSADIA 136 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCT--GGGEEEEEE--EEEEEECCCTTTEEEEES-HHHHHHHHSS-EEE--CHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCcccccEEEeCCcceecCcCCCCCceEecCCHHHHHHHHCcCEEeechHHHHh
Confidence 455556667788899999999999999999999988877722222 25788999999973 33344544
No 217
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=50.55 E-value=19 Score=36.11 Aligned_cols=45 Identities=9% Similarity=0.008 Sum_probs=31.1
Q ss_pred HHHHHHHHHHh-cCCCCCCcCEEEEe-ccCCCCCCchHHHHHHHcCC
Q 043382 103 IIGAIDERLAK-TGFKHKDIGILVVN-SSLFNPTPSLSAFIVNHYKL 147 (329)
Q Consensus 103 ~~~Aa~~aL~k-agv~p~dId~LVv~-ss~~~~~Ps~aa~I~~~Lgl 147 (329)
..+|++++|++ +|++|+|||.+-.+ |.+..--+.-..-+.+-+|-
T Consensus 285 ~~~ai~~Al~~~Agi~~~dId~ie~hgtgt~~~D~~E~~al~~~~~~ 331 (421)
T PTZ00050 285 ARRCMENALKDGANININDVDYVNAHATSTPIGDKIELKAIKKVFGD 331 (421)
T ss_pred HHHHHHHHHHhccCCChhhCCEEECCCccCCCCCHHHHHHHHHHhcc
Confidence 47899999999 99999999999776 44433223333345555553
No 218
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=50.36 E-value=50 Score=40.99 Aligned_cols=79 Identities=14% Similarity=0.113 Sum_probs=57.6
Q ss_pred chHHHHHHHHHHHHhcCCC----CCCcCEEEEeccCCC------------------------------------------
Q 043382 99 TDDVIIGAIDERLAKTGFK----HKDIGILVVNSSLFN------------------------------------------ 132 (329)
Q Consensus 99 a~~l~~~Aa~~aL~kagv~----p~dId~LVv~ss~~~------------------------------------------ 132 (329)
...++.+++.++|+++|+. .+.+++++-++...+
T Consensus 93 qqrl~L~~a~eALedAG~~~~~~~~r~GV~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (2582)
T TIGR02813 93 SQLLSLVVAKEVLNDAGLPDGYDRDKIGITLGVGGGQKQSSSLNARLQYPVLKKVFKASGVEDEDSEMLIKKFQDQYIHW 172 (2582)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCEEEEEEECCCcccchhhhhhhcchhhhhhhhccccchhhHHHhhhhhccccccc
Confidence 3568899999999999984 456666665432110
Q ss_pred ---CCC-----chHHHHHHHcCCCCCcceecccch----------HHHhcCCCCeEEEEeecC
Q 043382 133 ---PTP-----SLSAFIVNHYKLRSNILSYNLGAL----------QSAQVQPNSYTLVVSTEN 177 (329)
Q Consensus 133 ---~~P-----s~aa~I~~~Lglr~~v~~~dl~g~----------~lL~a~~~~~aLVVs~E~ 177 (329)
..| ..+..|.++||+++...++|-.+. +.|++|..+.+|+-+++.
T Consensus 173 ~~~~~~g~~~n~~A~RIS~~f~L~Gps~tVdtACsSSL~Al~~A~~~L~~G~~D~alvGGv~~ 235 (2582)
T TIGR02813 173 EENSFPGSLGNVISGRIANRFDLGGMNCVVDAACAGSLAAIRMALSELLEGRSEMMITGGVCT 235 (2582)
T ss_pred CccccccccccHHHHHHHHHhCCCCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEeccee
Confidence 011 247789999999987777776666 788999999999988775
No 219
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=49.92 E-value=20 Score=36.44 Aligned_cols=42 Identities=14% Similarity=0.187 Sum_probs=33.5
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCC
Q 043382 104 IGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRS 149 (329)
Q Consensus 104 ~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~ 149 (329)
..|++++++++|++|+|||++=++ ...+...-+..+.||+.+
T Consensus 312 ~~A~~~a~~~AGl~~~DiD~~Ei~----daFa~~~l~~~e~lGl~~ 353 (438)
T PTZ00455 312 RAAAQKALSMAGVKPSDLQVAEVH----DCFTIAELLMYEALGIAE 353 (438)
T ss_pred HHHHHHHHHHcCCCHHHCcEeeec----ccChHHHHHHHHHcCCCC
Confidence 689999999999999999987444 345566667788899864
No 220
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=49.11 E-value=18 Score=35.73 Aligned_cols=41 Identities=15% Similarity=0.174 Sum_probs=31.0
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCC
Q 043382 104 IGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLR 148 (329)
Q Consensus 104 ~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr 148 (329)
..|++++++++|++|+|||.+-.+- ..+....+..+.||+-
T Consensus 261 ~~a~~~al~~aGi~~~did~~e~~d----~ft~~~~~~~e~lgl~ 301 (389)
T PRK06064 261 VVAAEKAYKMAGIEPKDIDVAEVHD----CFTIAEILAYEDLGFA 301 (389)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEecC----CCcHHHHHHHHHcCCC
Confidence 5789999999999999999885542 1223556677888874
No 221
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=48.35 E-value=19 Score=36.16 Aligned_cols=45 Identities=13% Similarity=0.008 Sum_probs=35.1
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEe-ccCCCCCCchHHHHHHHcCC
Q 043382 103 IIGAIDERLAKTGFKHKDIGILVVN-SSLFNPTPSLSAFIVNHYKL 147 (329)
Q Consensus 103 ~~~Aa~~aL~kagv~p~dId~LVv~-ss~~~~~Ps~aa~I~~~Lgl 147 (329)
..+|.+++|+++|++|+|||.+-.. |.+..--+.-+..|.+-+|-
T Consensus 288 ~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E~~Al~~~fg~ 333 (418)
T PRK07910 288 AGHAMTRAIELAGLTPGDIDHVNAHATGTSVGDVAEGKAINNALGG 333 (418)
T ss_pred HHHHHHHHHHHhCCCHHHCCEEEcCCcCCCCCCHHHHHHHHHHhCC
Confidence 4789999999999999999998655 55555556666677777764
No 222
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=48.26 E-value=24 Score=36.94 Aligned_cols=44 Identities=16% Similarity=0.252 Sum_probs=32.0
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEe-ccCCCCCCchHHHHHHHcC
Q 043382 103 IIGAIDERLAKTGFKHKDIGILVVN-SSLFNPTPSLSAFIVNHYK 146 (329)
Q Consensus 103 ~~~Aa~~aL~kagv~p~dId~LVv~-ss~~~~~Ps~aa~I~~~Lg 146 (329)
..+|.+++|+++|++|+|||.|-.. |+|..--+.-...|.+-+|
T Consensus 407 ~~~am~~AL~~AGl~p~dIdyInaHGTGT~~gD~~E~~Ai~~~Fg 451 (540)
T PLN02787 407 VILCIEKALAQSGVSKEDVNYINAHATSTKAGDLKEYQALMRCFG 451 (540)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEccCccCCCCCHHHHHHHHHHhC
Confidence 3689999999999999999998655 5554434444555556555
No 223
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=48.21 E-value=16 Score=36.32 Aligned_cols=42 Identities=14% Similarity=0.207 Sum_probs=33.2
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCC
Q 043382 103 IIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLR 148 (329)
Q Consensus 103 ~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr 148 (329)
...|+++|++++|++|+|||++-++ ...+...-+..+.||+-
T Consensus 278 ~~~aa~~a~~~Agi~~~Didv~el~----D~fa~~~l~~le~lGl~ 319 (403)
T PRK06289 278 VRQAVLDAYRRAGVGLDDLDGFEVH----DCFTPSEYLAIDHIGLT 319 (403)
T ss_pred HHHHHHHHHHHcCCCHHHCeEEeee----ccchHHHHHHHHHcCCC
Confidence 3579999999999999999986544 34556667778888875
No 224
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=47.92 E-value=36 Score=33.69 Aligned_cols=30 Identities=13% Similarity=0.185 Sum_probs=25.6
Q ss_pred chHHHHHHHHHHHHhcCCCCCCcCEEEEec
Q 043382 99 TDDVIIGAIDERLAKTGFKHKDIGILVVNS 128 (329)
Q Consensus 99 a~~l~~~Aa~~aL~kagv~p~dId~LVv~s 128 (329)
..+...++.++.|+++|++++|||.+++..
T Consensus 203 y~~~~~~~~~~~l~~~g~~~~did~~i~H~ 232 (379)
T TIGR01835 203 YLNAFENAWNDYAKRTGLSLADFAAFCFHV 232 (379)
T ss_pred HHHHHHHHHHHHHHHhCCCHHHcCEEEECC
Confidence 345567889999999999999999998875
No 225
>PRK07475 hypothetical protein; Provisional
Probab=47.57 E-value=92 Score=28.94 Aligned_cols=86 Identities=17% Similarity=0.212 Sum_probs=52.1
Q ss_pred HHHHHHcCCCceE---eccCCCCCCCCCchhHHHH---------HhhchHHHHHHHHHHHHhcCCCCCCcCEEEEeccCC
Q 043382 64 LKLLERSRIGNMT---YGPKSLMDNPAENRHMKEA---------KKETDDVIIGAIDERLAKTGFKHKDIGILVVNSSLF 131 (329)
Q Consensus 64 ~~I~~~sGI~~R~---~~~~~~~~~pe~~~~ma~~---------~~ea~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~ 131 (329)
++.++..|+.... ..+.. |....+.+. .+++++-+.++++++.++ -.++|.||..|+.-
T Consensus 137 ~~~l~~~Gi~~~~~~~~~~g~-----e~~~~~~~~I~~~~~~~d~~~~~~~l~~~~~~l~~~----~~~~daIvL~CTeL 207 (245)
T PRK07475 137 PAHLLAVGVPPDTSSLPIAGL-----EEGGEFRRNILENRGELDNEAAEQEVVAAARALLER----HPDIGAIVLECTNM 207 (245)
T ss_pred HHHHHhCCCCCCCccccccCc-----ccchHHHHHHhcccccccHHHHHHHHHHHHHHHHhh----CCCCCEEEEcCcCh
Confidence 6778888997422 33322 222233222 223345566677666532 26899999998874
Q ss_pred CCCCchHHHHHHHcCCCCCcceecccch-HHHhcC
Q 043382 132 NPTPSLSAFIVNHYKLRSNILSYNLGAL-QSAQVQ 165 (329)
Q Consensus 132 ~~~Ps~aa~I~~~Lglr~~v~~~dl~g~-~lL~a~ 165 (329)
|..+..+.+++|++ .+|.+.+ .++.++
T Consensus 208 ---p~~~~~le~~~glP----ViDs~t~~~w~~~~ 235 (245)
T PRK07475 208 ---PPYAAAIQRATGLP----VFDIVTLINWLHSG 235 (245)
T ss_pred ---HHHHHHHHHhcCCC----EEeHHHHHHHHHhc
Confidence 45666777888774 6888887 555443
No 226
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=47.44 E-value=25 Score=34.50 Aligned_cols=48 Identities=19% Similarity=0.171 Sum_probs=38.0
Q ss_pred hchHHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCC
Q 043382 98 ETDDVIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRS 149 (329)
Q Consensus 98 ea~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~ 149 (329)
.+...+-++++++|+++|++++|||.+++.- +.+..-..+.++||++.
T Consensus 239 ~~~~~~~~~i~~~L~~~gl~~~did~~v~HQ----~~~~i~~~i~~~Lgl~~ 286 (353)
T PRK12880 239 MALECEPKSFKEILEFSKVDEKDIAFHLFHQ----SNAYLVDCIKEELKLND 286 (353)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHhCCCH
Confidence 4455567789999999999999999998753 34445568999999985
No 227
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=47.40 E-value=22 Score=35.91 Aligned_cols=44 Identities=11% Similarity=0.133 Sum_probs=29.4
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEe-ccCCCCCCchHHHHHHHcC
Q 043382 103 IIGAIDERLAKTGFKHKDIGILVVN-SSLFNPTPSLSAFIVNHYK 146 (329)
Q Consensus 103 ~~~Aa~~aL~kagv~p~dId~LVv~-ss~~~~~Ps~aa~I~~~Lg 146 (329)
...|++++|+++|++|+|||.+-.. |.+..--+.-..-+..-+|
T Consensus 301 ~~~a~~~Al~~Agi~~~dId~ve~hgtgt~~~D~~E~~ai~~~~~ 345 (437)
T PLN02836 301 AVLAMTRALQQSGLHPNQVDYVNAHATSTPLGDAVEARAIKTVFS 345 (437)
T ss_pred HHHHHHHHHHHcCCCHhHcCEEEccCCcCcCcCHHHHHHHHHHhc
Confidence 4678999999999999999998665 4443333333333444443
No 228
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=47.38 E-value=20 Score=35.40 Aligned_cols=41 Identities=10% Similarity=0.027 Sum_probs=31.7
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCC
Q 043382 104 IGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLR 148 (329)
Q Consensus 104 ~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr 148 (329)
..|++++|+++|++|+|||++-+. ...+....+..+.||+.
T Consensus 260 ~~a~~~al~~Agi~~~DiD~~ei~----d~ft~~~l~~le~lGl~ 300 (385)
T PRK12578 260 QLAARQAYNMAKVTPNDIEVATVH----DAFTIAEIMGYEDLGFT 300 (385)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEec----CcChHHHHHHHHHcCCC
Confidence 579999999999999999986444 23336666777888875
No 229
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=47.22 E-value=21 Score=32.82 Aligned_cols=38 Identities=21% Similarity=0.267 Sum_probs=27.8
Q ss_pred CCCcCcHHHHHHHHHHhCCCCCCCEEEEEeechhhhhh
Q 043382 252 NTSSSLVWYELAYAEAKRRIPKGDRICQIGFGAGFNCN 289 (329)
Q Consensus 252 NtsSaSi~~~La~~~~kgrlk~GDrV~~iafGsGf~~~ 289 (329)
+-...|-|...+.+.+.=.+++||+|+=||-||||..+
T Consensus 51 ~gqtis~P~~vA~m~~~L~~~~g~~VLEIGtGsGY~aA 88 (209)
T COG2518 51 CGQTISAPHMVARMLQLLELKPGDRVLEIGTGSGYQAA 88 (209)
T ss_pred CCceecCcHHHHHHHHHhCCCCCCeEEEECCCchHHHH
Confidence 33334445566666666568999999999999998754
No 230
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=46.09 E-value=39 Score=33.62 Aligned_cols=50 Identities=14% Similarity=0.104 Sum_probs=36.5
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCcceecccch
Q 043382 104 IGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSYNLGAL 159 (329)
Q Consensus 104 ~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~ 159 (329)
..|++++|+++|++|+|||.+=++ ...+...-+..+.||+.. ..+|.+|.
T Consensus 294 ~~a~~~al~~Agi~~~Did~~Ei~----d~f~~~~l~~~e~lg~~~--~~vN~~GG 343 (394)
T PLN02644 294 ALAIPKALKHAGLEASQVDYYEIN----EAFSVVALANQKLLGLDP--EKVNVHGG 343 (394)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEeC----cHHHHHHHHHHHHhCCCc--cccCCCCC
Confidence 469999999999999999988653 223445556677888853 35677766
No 231
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=45.91 E-value=79 Score=32.01 Aligned_cols=79 Identities=11% Similarity=0.104 Sum_probs=49.5
Q ss_pred chHHHHHHHHHHHHhcCCC-CCCcC--EEEE-eccC-CCC--------------------------CC-chHHHHHHHcC
Q 043382 99 TDDVIIGAIDERLAKTGFK-HKDIG--ILVV-NSSL-FNP--------------------------TP-SLSAFIVNHYK 146 (329)
Q Consensus 99 a~~l~~~Aa~~aL~kagv~-p~dId--~LVv-~ss~-~~~--------------------------~P-s~aa~I~~~Lg 146 (329)
...++..|+.+|++++|++ ..+.+ +-+. .++. ... .| ..+..++..+|
T Consensus 71 ~~~~a~~Aa~eAl~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~~~g 150 (412)
T COG0304 71 FSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIVFG 150 (412)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHHHHhC
Confidence 4677899999999999997 34443 2222 2332 111 12 23444566666
Q ss_pred CCCCcceecccch----------HHHhcCCCCeEEEEeecC
Q 043382 147 LRSNILSYNLGAL----------QSAQVQPNSYTLVVSTEN 177 (329)
Q Consensus 147 lr~~v~~~dl~g~----------~lL~a~~~~~aLVVs~E~ 177 (329)
++....++.-.++ ++|+.|..+.+++.++|.
T Consensus 151 ~~G~~~~~~tACatg~~AIg~A~~~I~~G~ad~~iaGG~e~ 191 (412)
T COG0304 151 LKGPNYTPVTACATGAHAIGDAVRLIRLGKADVVIAGGAEA 191 (412)
T ss_pred CCCCcCChhhhHHhHHHHHHHHHHHHHcCCCCEEEEccccc
Confidence 6644333322222 899999999999999976
No 232
>PRK07937 lipid-transfer protein; Provisional
Probab=45.20 E-value=46 Score=32.73 Aligned_cols=51 Identities=10% Similarity=0.027 Sum_probs=35.3
Q ss_pred HHHHHHHHHh-cCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCcceecccch
Q 043382 104 IGAIDERLAK-TGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSYNLGAL 159 (329)
Q Consensus 104 ~~Aa~~aL~k-agv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~ 159 (329)
..++++++++ +|++|+|||++=+. ...+....+..+.||+..+ ..+|.+|.
T Consensus 249 ~~~~~~a~~~aAgi~~~diD~~Ei~----D~F~~~~l~~~e~lGl~g~-~pvN~~GG 300 (352)
T PRK07937 249 SPSTALAAEAATGGDAGGVDVAELH----APFTHQELILREALGLGDK-TKVNPSGG 300 (352)
T ss_pred HHHHHHHHHHhcCCCHHHCCEEEEe----CCChHHHHHHHHHcCCCCC-CCcCCCcc
Confidence 4445566666 59999999987443 3456666778899999643 35676666
No 233
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=44.79 E-value=29 Score=33.24 Aligned_cols=50 Identities=30% Similarity=0.400 Sum_probs=38.7
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCcceecccch
Q 043382 104 IGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSYNLGAL 159 (329)
Q Consensus 104 ~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~ 159 (329)
+.|++.+|+++|++.+|||++=+|-.- .| -.-.+++.|++. +.-.|++|.
T Consensus 296 vPAI~~vLKksGlkl~DiDl~EvNEAF---Ap-Q~LAv~r~L~ld--~sKlNVNGG 345 (396)
T KOG1391|consen 296 VPAISGVLKKSGLKLKDIDLVEVNEAF---AP-QYLAVERSLDLD--ISKLNVNGG 345 (396)
T ss_pred cHHHHHHHHHcCCcccccceEEechhh---ch-HHHHHHHhhCCC--hhhccccCc
Confidence 568999999999999999999887432 12 123578889984 778888887
No 234
>PRK06158 thiolase; Provisional
Probab=43.06 E-value=23 Score=35.11 Aligned_cols=41 Identities=10% Similarity=0.203 Sum_probs=32.4
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCC
Q 043382 104 IGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLR 148 (329)
Q Consensus 104 ~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr 148 (329)
..|++++++++|++|+|||++=+ ....+...-+..+.||+-
T Consensus 257 ~~aa~~A~~~AGi~p~DId~~El----yD~Fs~~~l~~~E~lG~~ 297 (384)
T PRK06158 257 AESGPRAFAMAGLTPADIDVVEL----YDAFTINTILFLEDLGFC 297 (384)
T ss_pred HHHHHHHHHHcCCCHHHCcEEEe----cCCchHHHHHHHHHcCCC
Confidence 57999999999999999998743 334556666777888885
No 235
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=42.72 E-value=13 Score=36.95 Aligned_cols=41 Identities=17% Similarity=0.211 Sum_probs=32.2
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCC
Q 043382 104 IGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLR 148 (329)
Q Consensus 104 ~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr 148 (329)
..|+++||+++|++|+|||++=++ ...+...-+..+.||+.
T Consensus 272 ~~A~~~al~~Agi~~~DID~~Ei~----d~Fa~~~l~~~e~lgl~ 312 (393)
T cd00826 272 IEAARKALEKAGLGIGDLDLIEAH----DAFAANACATNEALGLC 312 (393)
T ss_pred HHHHHHHHHHcCCCHHHcCeeehh----hhhHHHHHHHHHHhCCC
Confidence 689999999999999999977443 33455666777888875
No 236
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=42.39 E-value=14 Score=37.01 Aligned_cols=51 Identities=20% Similarity=0.277 Sum_probs=32.1
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCcceecccch
Q 043382 103 IIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSYNLGAL 159 (329)
Q Consensus 103 ~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~ 159 (329)
...|+++||+++|++|+|||++=++ +. ......+-.+.||+. ...+|++|.
T Consensus 292 ~~~a~~~Al~~AGl~p~DID~~ei~---da-fa~~~l~~~~~l~~~--~~~vN~sGg 342 (392)
T PRK06633 292 PVPASQKALSKAGWSVNDLEVIEVN---EA-FAAQSIYVNREMKWD--MEKVNINGG 342 (392)
T ss_pred HHHHHHHHHHHcCCCHHHcCeeehh---hH-HHHHHHHHHhhhCCC--ccccCCCCc
Confidence 3678999999999999999988643 11 111111123456654 335677766
No 237
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=39.85 E-value=21 Score=35.38 Aligned_cols=42 Identities=14% Similarity=0.094 Sum_probs=32.9
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCC
Q 043382 103 IIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLR 148 (329)
Q Consensus 103 ~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr 148 (329)
...|++++++++|++|+|||++-++ -..+...-+..+.||+-
T Consensus 262 ~~~a~~~a~~~agl~~~did~~e~~----d~f~~~~~~~~e~lg~~ 303 (389)
T PRK07516 262 PRRAWQRALAQAGVTLDDLSFVETH----DCFTIAELIEYEAMGLA 303 (389)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEe----cCCCHHHHHHHHHcCCC
Confidence 3579999999999999999988554 23455566778888875
No 238
>PRK08256 lipid-transfer protein; Provisional
Probab=39.82 E-value=30 Score=34.24 Aligned_cols=42 Identities=12% Similarity=0.158 Sum_probs=33.1
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCC
Q 043382 104 IGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRS 149 (329)
Q Consensus 104 ~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~ 149 (329)
..|++++++++|++++|||++-++ ...+...-+..+.||+.+
T Consensus 267 ~~a~~~a~~~ag~~~~DiD~~ei~----d~f~~~~l~~le~lg~~~ 308 (391)
T PRK08256 267 RAAAQQVYEQAGIGPEDIDVVELH----DCFSANELLTYEALGLCP 308 (391)
T ss_pred HHHHHHHHHHcCCCHHHCCEEeec----cCCcHHHHHHHHHcCCCC
Confidence 579999999999999999987443 345566667778898863
No 239
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=39.28 E-value=14 Score=36.97 Aligned_cols=51 Identities=16% Similarity=0.168 Sum_probs=34.3
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCcceecccch
Q 043382 103 IIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSYNLGAL 159 (329)
Q Consensus 103 ~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~ 159 (329)
...|+++||+++|++|+|||++=++ -......-+-.+.||+.. ..+|++|.
T Consensus 292 ~~~a~~~al~~agl~~~Did~~ei~----eafa~~~l~~~e~lg~~~--~~vN~~GG 342 (392)
T PRK07108 292 PVFAVPKLLKQAGLKVDDIDLWELN----EAFAVQVLYCRDTLGIPM--DRLNVNGG 342 (392)
T ss_pred HHHHHHHHHHHcCCCHHHcCchHhh----hHHHHHHHHHHHhcCCCc--cccCCCCC
Confidence 4689999999999999999987422 112222333456778753 35677776
No 240
>KOG2707 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=38.65 E-value=48 Score=33.00 Aligned_cols=49 Identities=18% Similarity=0.194 Sum_probs=37.0
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCC-----chHHHHHHHcCCC
Q 043382 100 DDVIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTP-----SLSAFIVNHYKLR 148 (329)
Q Consensus 100 ~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~P-----s~aa~I~~~Lglr 148 (329)
.+.+-+..++||+++|.+|+|+|++-|......+.+ +.|-.++.++..+
T Consensus 83 r~ni~~~iqral~aa~~~p~dldaIAVT~gPGl~lsL~vGl~fA~glA~~l~kP 136 (405)
T KOG2707|consen 83 RENIPRLIQRALDAAGLSPKDLDAIAVTRGPGLPLSLKVGLSFAKGLAVKLQKP 136 (405)
T ss_pred HHHHHHHHHHHHHHcCCCcccceeEEEecCCCceeehhhhHHHHHHHHHhccCC
Confidence 456678899999999999999999988766654433 4556677777665
No 241
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=38.20 E-value=47 Score=33.16 Aligned_cols=42 Identities=14% Similarity=0.127 Sum_probs=31.8
Q ss_pred HHHHHHHHHhcCCC--CCCcCEEEEeccCCCCCCchHHHHHHHcCCCC
Q 043382 104 IGAIDERLAKTGFK--HKDIGILVVNSSLFNPTPSLSAFIVNHYKLRS 149 (329)
Q Consensus 104 ~~Aa~~aL~kagv~--p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~ 149 (329)
..|++++++++|++ ++|||++=++ -..+....+..+.||+.+
T Consensus 259 ~~Aa~~a~~~AGi~~p~~DiD~~ei~----D~Ft~~~l~~~e~lG~~~ 302 (385)
T PRK06066 259 RIAADMAYKMAGIESPRKEVDAAEVD----DRYSYKELQHIEALRLSE 302 (385)
T ss_pred HHHHHHHHHHcCCCCCHHHCcEEEEe----cCChHHHHHHHHHcCCCC
Confidence 36999999999997 6999988665 234445567778888753
No 242
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=37.76 E-value=24 Score=35.51 Aligned_cols=25 Identities=20% Similarity=0.360 Sum_probs=21.9
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEe
Q 043382 103 IIGAIDERLAKTGFKHKDIGILVVN 127 (329)
Q Consensus 103 ~~~Aa~~aL~kagv~p~dId~LVv~ 127 (329)
...|++++|+++|++|+|||++=++
T Consensus 309 ~~~a~~~al~~aGl~~~did~~ei~ 333 (426)
T PRK08170 309 PVHAATPLLQRHGLTLEDLDLWEIN 333 (426)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEec
Confidence 4579999999999999999987655
No 243
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=36.97 E-value=31 Score=34.36 Aligned_cols=41 Identities=10% Similarity=0.096 Sum_probs=31.4
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCC
Q 043382 104 IGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLR 148 (329)
Q Consensus 104 ~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr 148 (329)
..|++++++++|++|+|||++=+ ....+....+..+.||+-
T Consensus 258 ~~aa~~a~~~AGi~~~did~~el----yD~Fs~~~~~~~E~lGl~ 298 (388)
T PRK08142 258 AWSGPAAFAEAGVTPADIKYASI----YDSFTITVLMQLEDLGFC 298 (388)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEE----eccchHHHHHHHHHcCCC
Confidence 67999999999999999997533 233455566777888884
No 244
>PRK06059 lipid-transfer protein; Provisional
Probab=36.72 E-value=25 Score=34.96 Aligned_cols=41 Identities=20% Similarity=0.213 Sum_probs=29.7
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCC
Q 043382 104 IGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLR 148 (329)
Q Consensus 104 ~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr 148 (329)
..|++++++++|++|+|||++=++-+ ......+..+.||+.
T Consensus 276 ~~a~~~a~~~agl~~~Did~~El~d~----f~~~~l~~~e~lGl~ 316 (399)
T PRK06059 276 DQILDAAYAEAGIGPEDLSLAEVYDL----STALELDWYEHLGLC 316 (399)
T ss_pred HHHHHHHHHHcCCCHHHCcEEeeccc----ChHHHHHHHHHcCCC
Confidence 46899999999999999998755422 223344445888875
No 245
>PRK08329 threonine synthase; Validated
Probab=36.58 E-value=34 Score=33.44 Aligned_cols=35 Identities=14% Similarity=0.114 Sum_probs=30.3
Q ss_pred CCcCcHHHHHHHHHHhCCCCCCCEEEEEeechhhh
Q 043382 253 TSSSLVWYELAYAEAKRRIPKGDRICQIGFGAGFN 287 (329)
Q Consensus 253 tsSaSi~~~La~~~~kgrlk~GDrV~~iafGsGf~ 287 (329)
.+|+...-.+..+.++|.+++|++|+++--|+|+|
T Consensus 311 pssa~a~Aa~~~l~~~g~i~~~~~Vv~~~TG~glK 345 (347)
T PRK08329 311 PTSAVALAAYWKLLEEGLIEGGSKVLLPLSGSGLK 345 (347)
T ss_pred ccHHHHHHHHHHHHHhCCCCCCCeEEEEeCCCCcc
Confidence 35777777888888999999999999999999987
No 246
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=36.40 E-value=19 Score=36.07 Aligned_cols=53 Identities=19% Similarity=0.163 Sum_probs=35.6
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCcceecccch
Q 043382 103 IIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSYNLGAL 159 (329)
Q Consensus 103 ~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~ 159 (329)
...|++++|+++|++|+|||++=++- ......-+..+.||+..+-..+|.+|.
T Consensus 298 ~~~a~~~a~~~agl~~~did~~ei~d----~Fa~~~l~~~e~lg~~~~~~~vN~~GG 350 (401)
T PRK08131 298 PVEAIKKALARAGLTLDDMDIIEINE----AFASQVLGCLKGLGVDFDDPRVNPNGG 350 (401)
T ss_pred HHHHHHHHHHHcCCCHHHCCeehhcc----HHHHHHHHHHHHcCCCCCCCCccCCcc
Confidence 46799999999999999999886441 111223345677887422335666666
No 247
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=35.74 E-value=23 Score=35.81 Aligned_cols=24 Identities=21% Similarity=0.353 Sum_probs=21.6
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEe
Q 043382 104 IGAIDERLAKTGFKHKDIGILVVN 127 (329)
Q Consensus 104 ~~Aa~~aL~kagv~p~dId~LVv~ 127 (329)
..|++++++++|++|+|||++=++
T Consensus 312 ~~a~~~a~~~AGl~~~Did~~Ei~ 335 (427)
T PRK09268 312 AYAVPRLLARNGLTLQDFDFYEIH 335 (427)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEec
Confidence 569999999999999999988665
No 248
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=35.65 E-value=55 Score=32.77 Aligned_cols=45 Identities=16% Similarity=0.168 Sum_probs=31.8
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEe-ccCCCCCCchHHHHHHHcCCC
Q 043382 104 IGAIDERLAKTGFKHKDIGILVVN-SSLFNPTPSLSAFIVNHYKLR 148 (329)
Q Consensus 104 ~~Aa~~aL~kagv~p~dId~LVv~-ss~~~~~Ps~aa~I~~~Lglr 148 (329)
..|.+++|+++|+.|+|||.|=-. |||..---.-+..|.+-++-.
T Consensus 304 ~~am~raL~~Agl~pe~i~YvNAHATST~~GD~aE~~Ai~~vf~~~ 349 (440)
T KOG1394|consen 304 VLAMERALKDAGLSPEDIDYVNAHATSTPLGDAAEAEAIKRVFGEH 349 (440)
T ss_pred HHHHHHHHHHcCCChhhcCeeecccccCcCchHHHHHHHHHHhccC
Confidence 888999999999999999988433 666543333444455555543
No 249
>PF07736 CM_1: Chorismate mutase type I; InterPro: IPR008243 Chorismate mutase (CM; 5.4.99.5 from EC) catalyses the reaction at the branch point of the biosynthetic pathway leading to the three aromatic amino acids, phenylalanine, tryptophan and tyrosine (chorismic acid is the last common intermediate, and CM leads to the L-phenylalanine/L-tyrosine branch). It is part of the shikimate pathway, which is present only in bacteria, fungi and plants. This entry represents a family of monofunctional (non-fused) chorismate mutases from Gram-positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus). They are monofunctional, homotrimeric, nonallosteric enzymes and are not regulated by the end-product aromatic amino acids. The three types of CM are AroQ class, Prokaryotic type (e.g., IPR008239 from INTERPRO amongst others); AroQ class, Eukaryotic type (IPR008238 from INTERPRO); and AroH class. They fall into two structural folds (AroQ class and AroH class) which are completely unrelated []. The two types of the AroQ structural class (the Escherichia coli CM dimer and the yeast CM monomer) can be structurally superimposed, and the topology of the four-helix bundle forming the active site is conserved []. For additional information please see [, , , , , , ].; PDB: 2CHS_K 2CHT_L 1COM_J 1FNJ_A 1FNK_A 1DBF_C 1UI9_A 1ODE_A 1UFY_A 1XHO_C ....
Probab=35.59 E-value=68 Score=26.88 Aligned_cols=51 Identities=12% Similarity=0.159 Sum_probs=33.7
Q ss_pred HHHHHHHHhcCCCCCCcCEEEEeccCC--CCCCchHHHHHHHc-CCCCCcceecccch
Q 043382 105 GAIDERLAKTGFKHKDIGILVVNSSLF--NPTPSLSAFIVNHY-KLRSNILSYNLGAL 159 (329)
Q Consensus 105 ~Aa~~aL~kagv~p~dId~LVv~ss~~--~~~Ps~aa~I~~~L-glr~~v~~~dl~g~ 159 (329)
+-.++.+++.+++++||--+++.++.| ...|..++ +++ |.. +++-++...+
T Consensus 24 eLl~~i~~~N~l~~~dIvSi~FT~T~DL~a~fPA~a~---R~~~g~~-~Vpl~c~~E~ 77 (118)
T PF07736_consen 24 ELLEEILERNELSPEDIVSIIFTVTPDLDAAFPAAAA---RELPGWD-DVPLMCAQEM 77 (118)
T ss_dssp HHHHHHHHHTT--GGGEEEEEEEE-TT--SS-TCHHH---HHTTTGT-TSEEEEEE--
T ss_pred HHHHHHHHHcCCCHHHEEEEEEEeCCCcCccChHHHH---HccCCCC-ccceeccCcC
Confidence 334667788999999999999987764 67787764 555 775 7888877766
No 250
>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain
Probab=34.92 E-value=78 Score=29.18 Aligned_cols=28 Identities=21% Similarity=0.162 Sum_probs=21.1
Q ss_pred chHHHHHHHHHHHHhcCCCCCCcCEEEEeccC
Q 043382 99 TDDVIIGAIDERLAKTGFKHKDIGILVVNSSL 130 (329)
Q Consensus 99 a~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~ 130 (329)
...+++.++.+++++. .++|.+|++|..
T Consensus 34 ~~rla~~~a~~~~~~~----~~~d~~VfaS~~ 61 (218)
T PF13723_consen 34 LSRLALEAALECLAED----EQPDAIVFASRH 61 (218)
T ss_pred HHHHHHHHHHHHHhcc----CCCCcEEEEeCC
Confidence 3567788888888643 678899999875
No 251
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=34.00 E-value=25 Score=35.55 Aligned_cols=39 Identities=13% Similarity=0.163 Sum_probs=27.3
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcC
Q 043382 104 IGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYK 146 (329)
Q Consensus 104 ~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lg 146 (329)
..|+++||+++|++++|||++=++ ...+...-+-.+.||
T Consensus 314 ~~a~~~al~~Agl~~~Did~~Ei~----daFa~~~l~~~e~lg 352 (430)
T TIGR02446 314 SYATPLALQRAGLALSDLTLIDMH----EAFAAQTLANVQMFA 352 (430)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEec----cccHHHHHHHHHHhc
Confidence 468999999999999999987544 223334444455555
No 252
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=33.71 E-value=28 Score=34.74 Aligned_cols=24 Identities=21% Similarity=0.364 Sum_probs=21.5
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEe
Q 043382 104 IGAIDERLAKTGFKHKDIGILVVN 127 (329)
Q Consensus 104 ~~Aa~~aL~kagv~p~dId~LVv~ 127 (329)
.++++++|+++|++|+|||.+-..
T Consensus 284 ~~a~~~Al~~Agi~~~dId~v~~h 307 (410)
T PRK07103 284 MRVIRAALRRAGLGPEDIDYVNPH 307 (410)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEcc
Confidence 689999999999999999987655
No 253
>TIGR01796 CM_mono_aroH monofunctional chorismate mutase, gram positive type, clade 1. This model represents a family of monofunctional (non-fused) chorismate mutases from gram positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus).
Probab=32.39 E-value=1.1e+02 Score=25.71 Aligned_cols=49 Identities=6% Similarity=0.101 Sum_probs=37.3
Q ss_pred HHHHHHhcCCCCCCcCEEEEeccCC--CCCCchHHHHHHHc-CCCCCcceecccch
Q 043382 107 IDERLAKTGFKHKDIGILVVNSSLF--NPTPSLSAFIVNHY-KLRSNILSYNLGAL 159 (329)
Q Consensus 107 a~~aL~kagv~p~dId~LVv~ss~~--~~~Ps~aa~I~~~L-glr~~v~~~dl~g~ 159 (329)
.++.+++.+++++||--+++..+.| ...|..+ ++++ |.. +++-++...|
T Consensus 26 l~~ii~~N~l~~edivSv~FT~T~DL~a~FPA~a---aR~~~Gw~-~Vplmc~qEm 77 (117)
T TIGR01796 26 LTELMERNELTPEDLISVIFTVTEDLHADFPAAA---ARGLPGWT-DVPVMCAQEI 77 (117)
T ss_pred HHHHHHHcCCCHHHEEEEEEEecCcccccChHHH---HHhccCCC-CcceeccCcC
Confidence 4566788999999999988886664 5566554 5566 886 7888888877
No 254
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=32.23 E-value=26 Score=35.40 Aligned_cols=24 Identities=17% Similarity=0.259 Sum_probs=21.3
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEe
Q 043382 104 IGAIDERLAKTGFKHKDIGILVVN 127 (329)
Q Consensus 104 ~~Aa~~aL~kagv~p~dId~LVv~ 127 (329)
..|++++|+++|++++|||++=++
T Consensus 312 ~~a~~~al~~AGl~~~DiD~~Ei~ 335 (428)
T PRK08963 312 AYATPLALERAGLTLADLTLIDMH 335 (428)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEc
Confidence 578999999999999999988554
No 255
>cd02185 AroH Chorismate mutase (AroH) is one of at least five chorismate-utilizing enzymes present in microorganisms that catalyze the rearrangement of chorismate to prephenic acid, the first committed step in the biosynthesis of aromatic amino acids. In prokaryotes, chorismate mutase may be fused to prephenate dehydratase, prephenate dehydrogenase, or 3-deoxy-D-arabino-heptulosonat-7-phosphate (DAHP) as part of a bifunctional enzyme. The AroH domain forms a homotrimer with three-fold symmetry.
Probab=31.79 E-value=1.1e+02 Score=25.50 Aligned_cols=50 Identities=10% Similarity=0.084 Sum_probs=37.0
Q ss_pred HHHHHHhcCCCCCCcCEEEEeccCC--CCCCchHHHHHHHcCCCCCcceecccch
Q 043382 107 IDERLAKTGFKHKDIGILVVNSSLF--NPTPSLSAFIVNHYKLRSNILSYNLGAL 159 (329)
Q Consensus 107 a~~aL~kagv~p~dId~LVv~ss~~--~~~Ps~aa~I~~~Lglr~~v~~~dl~g~ 159 (329)
.++.+++.+++++||--+++..+.| ...|.. +++++|.-.+++-++...|
T Consensus 26 l~~i~~~N~l~~edivSv~FT~T~DL~a~FPA~---aaR~~~~~~~Vplmc~qE~ 77 (117)
T cd02185 26 LEEIIERNNIKPEDIISVIFTVTPDLDAAFPAK---AARELGGWKYVPLMCAQEM 77 (117)
T ss_pred HHHHHHHcCCCHHHEEEEEEEeCCcccccChHH---HHHhcCCCCCcceeecCcC
Confidence 4566788999999999988886664 456654 5667755558888888777
No 256
>PLN03169 chalcone synthase family protein; Provisional
Probab=31.50 E-value=85 Score=31.23 Aligned_cols=51 Identities=22% Similarity=0.261 Sum_probs=35.9
Q ss_pred hchHHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCC
Q 043382 98 ETDDVIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSN 150 (329)
Q Consensus 98 ea~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~ 150 (329)
.+...+-+.++++|+++|++++|||.+.+.. ....+..-..++++||++.+
T Consensus 278 ~~~~~~~~~i~~~L~~~gl~~~did~~~~v~--Hq~n~~il~~v~~~Lgl~~e 328 (391)
T PLN03169 278 KIEDNIEGFCKKLMKKAGLVEKDYNDLFWAV--HPGGPAILNRLEKKLKLAPE 328 (391)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCcceEEe--cCCCHHHHHHHHHHcCCCHH
Confidence 3455566678999999999999999443222 22335566678999999853
No 257
>PRK05183 hscA chaperone protein HscA; Provisional
Probab=29.94 E-value=1.3e+02 Score=31.97 Aligned_cols=57 Identities=9% Similarity=0.098 Sum_probs=41.2
Q ss_pred hHHHHHhhchHHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCC
Q 043382 91 HMKEAKKETDDVIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLR 148 (329)
Q Consensus 91 ~ma~~~~ea~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr 148 (329)
.+.+.-+..-+=+.+.++++|+++|++++|||.|++.... .-.|....+|.+.+|..
T Consensus 299 efe~l~~~l~~~~~~~i~~~L~~a~~~~~~i~~ViLvGGs-sriP~v~~~l~~~fg~~ 355 (616)
T PRK05183 299 QFNALIAPLVKRTLLACRRALRDAGVEADEVKEVVMVGGS-TRVPLVREAVGEFFGRT 355 (616)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCEEEEECCc-ccChHHHHHHHHHhccC
Confidence 3333333333445566789999999999999999887432 24788999999999865
No 258
>COG2971 Predicted N-acetylglucosamine kinase [Carbohydrate transport and metabolism]
Probab=29.63 E-value=45 Score=32.32 Aligned_cols=63 Identities=22% Similarity=0.095 Sum_probs=42.4
Q ss_pred HHHhhchHHHHHHHHHHHHhcCCCCCCcCEEEEeccC-CCCCCchHHHHHHHcCCCCCcceecccch
Q 043382 94 EAKKETDDVIIGAIDERLAKTGFKHKDIGILVVNSSL-FNPTPSLSAFIVNHYKLRSNILSYNLGAL 159 (329)
Q Consensus 94 ~~~~ea~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~-~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~ 159 (329)
.-+|+|..-+..|++++++++|.+|++|+..+..-.. .... -.+..+-...++ -...+++.+-
T Consensus 42 ~~~e~A~~ni~~ai~~A~~~aG~~~~~i~~~~agla~ag~~~--~~~~~~~~~~l~-~a~~v~v~~D 105 (301)
T COG2971 42 VGKEEAVRNIKDAIREALDEAGLKPDEIAAIVAGLALAGANV--EEAREELERLLP-FAGKVDVEND 105 (301)
T ss_pred cchHHHHHHHHHHHHHHHHhcCCCHHHhCceeeeeeccCcch--hHHHHHHHHhcC-ccceEEEecC
Confidence 3457788889999999999999999999998887655 3222 222223344443 2336666665
No 259
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=29.15 E-value=72 Score=31.08 Aligned_cols=36 Identities=31% Similarity=0.300 Sum_probs=28.8
Q ss_pred CcCcHHHHHHHHHHhCCCCCCCEEEEEeechhhhhh
Q 043382 254 SSSLVWYELAYAEAKRRIPKGDRICQIGFGAGFNCN 289 (329)
Q Consensus 254 sSaSi~~~La~~~~kgrlk~GDrV~~iafGsGf~~~ 289 (329)
++.+-|..++++.+.-.+++|++|+-+|.|+|....
T Consensus 61 ~~~~~p~l~a~ll~~L~i~~g~~VLDIG~GtG~~a~ 96 (322)
T PRK13943 61 STSSQPSLMALFMEWVGLDKGMRVLEIGGGTGYNAA 96 (322)
T ss_pred ccCCcHHHHHHHHHhcCCCCCCEEEEEeCCccHHHH
Confidence 566677777888776668899999999999997543
No 260
>CHL00094 dnaK heat shock protein 70
Probab=28.09 E-value=1.2e+02 Score=32.09 Aligned_cols=46 Identities=11% Similarity=0.185 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCC
Q 043382 102 VIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLR 148 (329)
Q Consensus 102 l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr 148 (329)
-+...++++|+++|++++|||.|++...+ .-.|....+|.+.+|..
T Consensus 310 ~~~~~i~~~L~~a~~~~~~i~~ViLvGGs-sriP~v~~~l~~~fg~~ 355 (621)
T CHL00094 310 RCRIPVENALKDAKLDKSDIDEVVLVGGS-TRIPAIQELVKKLLGKK 355 (621)
T ss_pred HHHHHHHHHHHHcCCChhhCcEEEEECCc-cCChHHHHHHHHHhCCC
Confidence 34456789999999999999999887443 45899999999999864
No 261
>TIGR02350 prok_dnaK chaperone protein DnaK. Members of this family are the chaperone DnaK, of the DnaK-DnaJ-GrpE chaperone system. All members of the seed alignment were taken from completely sequenced bacterial or archaeal genomes and (except for Mycoplasma sequence) found clustered with other genes of this systems. This model excludes DnaK homologs that are not DnaK itself, such as the heat shock cognate protein HscA (TIGR01991). However, it is not designed to distinguish among DnaK paralogs in eukaryotes. Note that a number of dnaK genes have shadow ORFs in the same reverse (relative to dnaK) reading frame, a few of which have been assigned glutamate dehydrogenase activity. The significance of this observation is unclear; lengths of such shadow ORFs are highly variable as if the presumptive protein product is not conserved.
Probab=28.01 E-value=1.1e+02 Score=32.09 Aligned_cols=48 Identities=10% Similarity=0.235 Sum_probs=38.3
Q ss_pred chHHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCC
Q 043382 99 TDDVIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKL 147 (329)
Q Consensus 99 a~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lgl 147 (329)
.-+=+.+.++++|+++|++++|||.|++...+- -.|....+|.+.+|.
T Consensus 303 l~~~~~~~i~~~l~~a~~~~~~i~~V~LvGGss-riP~v~~~i~~~f~~ 350 (595)
T TIGR02350 303 LVERTKEPVRQALKDAGLSASDIDEVILVGGST-RIPAVQELVKDFFGK 350 (595)
T ss_pred HHHHHHHHHHHHHHHcCCCHhHCcEEEEECCcc-cChHHHHHHHHHhCC
Confidence 334456677899999999999999998874332 389999999999984
No 262
>PRK13411 molecular chaperone DnaK; Provisional
Probab=27.41 E-value=1.4e+02 Score=32.01 Aligned_cols=47 Identities=17% Similarity=0.351 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCC
Q 043382 101 DVIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLR 148 (329)
Q Consensus 101 ~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr 148 (329)
+=+.+.++++|+++|++++|||.|++.... .-.|.+-.+|.+.+|-+
T Consensus 308 ~~~~~~i~~~L~~a~~~~~~id~ViLvGGs-sriP~v~~~l~~~f~~~ 354 (653)
T PRK13411 308 EATIEPMQQALKDAGLKPEDIDRVILVGGS-TRIPAVQEAIQKFFGGK 354 (653)
T ss_pred HHHHHHHHHHHHHcCCCHHHCcEEEEECCC-CCcchHHHHHHHHcCCc
Confidence 335667889999999999999988877322 35788999999999743
No 263
>PRK13410 molecular chaperone DnaK; Provisional
Probab=27.36 E-value=1.4e+02 Score=32.20 Aligned_cols=49 Identities=14% Similarity=0.236 Sum_probs=38.8
Q ss_pred chHHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCC
Q 043382 99 TDDVIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLR 148 (329)
Q Consensus 99 a~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr 148 (329)
.-+-+...++++|+++|++++|||.|+++... .-+|....+|.+.+|..
T Consensus 307 l~~r~~~~i~~~L~~ag~~~~dId~VvLVGGs-sRiP~V~~~l~~~fg~~ 355 (668)
T PRK13410 307 LLDRLLRPVKRALKDAGLSPEDIDEVVLVGGS-TRMPMVQQLVRTLIPRE 355 (668)
T ss_pred HHHHHHHHHHHHHHHcCCChhhCcEEEEECCc-cccHHHHHHHHHHcCCC
Confidence 34445667889999999999999998877433 34889999999999864
No 264
>PRK05571 ribose-5-phosphate isomerase B; Provisional
Probab=26.89 E-value=2.9e+02 Score=23.96 Aligned_cols=101 Identities=17% Similarity=0.188 Sum_probs=62.1
Q ss_pred hHHHHHHHHHHHcCCCceEeccCCCCCCCCCchhHHHHHhhchHHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCch
Q 043382 58 NYVTVLLKLLERSRIGNMTYGPKSLMDNPAENRHMKEAKKETDDVIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSL 137 (329)
Q Consensus 58 ~~~~~~~~I~~~sGI~~R~~~~~~~~~~pe~~~~ma~~~~ea~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~ 137 (329)
+|.+.+...++..|.+=.-+-+.+.. .+.+-++.+ ..+++...+. ..|-+++|+.|...
T Consensus 13 ~lK~~l~~~L~~~g~eV~D~G~~~~~-~~~dYpd~a----------~~va~~V~~g----~~~~GIliCGtGiG------ 71 (148)
T PRK05571 13 ELKEEIIEHLEELGHEVIDLGPDSYD-ASVDYPDYA----------KKVAEAVVAG----EADRGILICGTGIG------ 71 (148)
T ss_pred HHHHHHHHHHHHCCCEEEEcCCCCCC-CCCCHHHHH----------HHHHHHHHcC----CCCEEEEEcCCcHH------
Confidence 66666666666667543322221110 001223444 7777766542 35666666655443
Q ss_pred HHHHHHHc-CCCCCcceecccchHHHhcCCCCeEEEEeecCCCC
Q 043382 138 SAFIVNHY-KLRSNILSYNLGALQSAQVQPNSYTLVVSTENITL 180 (329)
Q Consensus 138 aa~I~~~L-glr~~v~~~dl~g~~lL~a~~~~~aLVVs~E~~S~ 180 (329)
.++.+|++ |+| -+.+.|...+.+.+.+.+.++|.+++..++.
T Consensus 72 ~siaANK~~GIR-AA~~~d~~~A~~ar~hNnaNVL~lG~r~ig~ 114 (148)
T PRK05571 72 MSIAANKVKGIR-AALCHDTYSAHLAREHNNANVLALGARVIGP 114 (148)
T ss_pred HHHHHhcCCCeE-EEEECCHHHHHHHHHhcCCcEEEECccccCH
Confidence 35777876 455 5667777777888899999999999998874
No 265
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=26.71 E-value=79 Score=28.45 Aligned_cols=34 Identities=18% Similarity=0.290 Sum_probs=28.5
Q ss_pred cCcHHHHHHHHHHhCCCCCCCEEEEEeechhhhh
Q 043382 255 SSLVWYELAYAEAKRRIPKGDRICQIGFGAGFNC 288 (329)
Q Consensus 255 SaSi~~~La~~~~kgrlk~GDrV~~iafGsGf~~ 288 (329)
+.|-|...+.+.+.-.+++|++|+=+|-|+|+..
T Consensus 58 ~~~~p~~~~~~~~~l~~~~g~~VLdIG~GsG~~t 91 (212)
T PRK13942 58 TISAIHMVAIMCELLDLKEGMKVLEIGTGSGYHA 91 (212)
T ss_pred EeCcHHHHHHHHHHcCCCCcCEEEEECCcccHHH
Confidence 4566777788888777899999999999999765
No 266
>PTZ00186 heat shock 70 kDa precursor protein; Provisional
Probab=26.23 E-value=1.6e+02 Score=31.55 Aligned_cols=51 Identities=14% Similarity=0.245 Sum_probs=38.8
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCCcceec
Q 043382 103 IIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSNILSYN 155 (329)
Q Consensus 103 ~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~v~~~d 155 (329)
+...++++|+++|++++|||.||++..+ .-+|..-.+|.+.+|.. ....+|
T Consensus 336 ~~~~v~~~L~~a~~~~~dId~VvLVGGs-sriP~V~~~l~~~fg~~-~~~~~n 386 (657)
T PTZ00186 336 SIAPCKQCMKDAGVELKEINDVVLVGGM-TRMPKVVEEVKKFFQKD-PFRGVN 386 (657)
T ss_pred HHHHHHHHHHHcCCChhhCCEEEEECCc-ccChHHHHHHHHHhCCC-ccccCC
Confidence 3456788999999999999998877322 25889999999999864 344443
No 267
>PLN03184 chloroplast Hsp70; Provisional
Probab=26.16 E-value=1.4e+02 Score=32.05 Aligned_cols=48 Identities=13% Similarity=0.159 Sum_probs=38.1
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCC
Q 043382 100 DDVIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLR 148 (329)
Q Consensus 100 ~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr 148 (329)
-+=+...++++|++++++++|||.|++.-.+- -+|..-.+|.+.+|..
T Consensus 345 ~~r~~~~i~~~L~~a~~~~~dId~ViLvGGss-riP~V~~~i~~~fg~~ 392 (673)
T PLN03184 345 LDRCKTPVENALRDAKLSFKDIDEVILVGGST-RIPAVQELVKKLTGKD 392 (673)
T ss_pred HHHHHHHHHHHHHHcCCChhHccEEEEECCcc-ccHHHHHHHHHHhCCC
Confidence 33445668889999999999999998874332 4899999999999864
No 268
>TIGR01991 HscA Fe-S protein assembly chaperone HscA. The Heat Shock Cognate proteins HscA and HscB act together as chaperones. HscA resembles DnaK but belongs in a separate clade. The apparent function is to aid assembly of iron-sulfur cluster proteins. Homologs from Buchnera and Wolbachia are clearly in the same clade but are highly derived and score lower than some examples of DnaK.
Probab=25.58 E-value=1.5e+02 Score=31.31 Aligned_cols=47 Identities=11% Similarity=0.176 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCC
Q 043382 101 DVIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLR 148 (329)
Q Consensus 101 ~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr 148 (329)
+=+.+.++++|+++|++++|||.|+++... .-.|....+|.+.+|..
T Consensus 293 ~~i~~~i~~~L~~a~~~~~~id~ViLvGGs-sriP~V~~~l~~~f~~~ 339 (599)
T TIGR01991 293 QKTLSICRRALRDAGLSVEEIKGVVLVGGS-TRMPLVRRAVAELFGQE 339 (599)
T ss_pred HHHHHHHHHHHHHcCCChhhCCEEEEECCc-CCChHHHHHHHHHhCCC
Confidence 335677889999999999999998876322 35788999999999864
No 269
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=25.30 E-value=90 Score=30.93 Aligned_cols=43 Identities=9% Similarity=0.176 Sum_probs=32.5
Q ss_pred HHHHHHHHHHhcCCC--CCCcCEEEEeccCCCCCCchHHHHHHHcCCCC
Q 043382 103 IIGAIDERLAKTGFK--HKDIGILVVNSSLFNPTPSLSAFIVNHYKLRS 149 (329)
Q Consensus 103 ~~~Aa~~aL~kagv~--p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~ 149 (329)
...|++++++++|++ ++|||++=+ ....+...-+..+.||+.+
T Consensus 257 ~~~a~~~a~~~Agi~~p~~Did~~el----~d~F~~~~~~~~e~lGl~~ 301 (386)
T PRK08313 257 GRDAAAALWKAAGITDPRDEIDVAEI----YVPFSWFEPMWLENLGFAP 301 (386)
T ss_pred HHHHHHHHHHHcCCCCChhhCCEEEe----ccCChHHHHHHHHHcCCCC
Confidence 357999999999997 699997633 3345566667788898853
No 270
>PF02502 LacAB_rpiB: Ribose/Galactose Isomerase; InterPro: IPR003500 This entry represents the sugar isomerase enzymes ribose 5-phosphate isomerase B (rpiB), galactose isomerase subunit A (LacA) and galactose isomerase subunit B (LacB). Galactose-6-phosphate isomerase (5.3.1.26 from EC) is a heteromultimeric protein consisting of subunits LacA and LacB, and catalyses the conversion of D-galactose 6-phosphate to D-tagatose and 6-phosphate in the tagatose 6-phosphate pathway of lactose catabolism []. Galactose-6-phosphate isomerase is induced by galactose or lactose. This entry represents the LacB subunit. Ribose 5-phosphate isomerase (5.3.1.6 from EC) forms a homodimer and catalyses the interconversion of D-ribose 5-phosphate and D-ribulose 5-phosphate in the non-oxidative branch of the pentose phosphate pathway. This reaction permits the synthesis of ribose from other sugars, as well as the recycling of sugars from nucleotide breakdown. Two unrelated enzymes can catalyse this reaction: RpiA (found in most organisms) and RpiB (found in some bacteria and eukaryotes). RpiB is also involved in metabolism of the rare sugar, allose, in addition to ribose sugars. The structures of RpiA and RpiB are distinct, RpiB having a Rossmann-type alpha/beta/alpha sandwich topology [].; GO: 0005975 carbohydrate metabolic process; PDB: 3HEE_A 3HE8_A 3PH3_B 3PH4_B 3ONO_A 4EM8_B 3S5P_B 1O1X_A 2BES_D 2VVP_D ....
Probab=24.93 E-value=2.3e+02 Score=24.18 Aligned_cols=100 Identities=14% Similarity=0.157 Sum_probs=57.8
Q ss_pred hHHHHHHHHHHHcCCCceEeccCCCCCCCCCchhHHHHHhhchHHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCch
Q 043382 58 NYVTVLLKLLERSRIGNMTYGPKSLMDNPAENRHMKEAKKETDDVIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSL 137 (329)
Q Consensus 58 ~~~~~~~~I~~~sGI~~R~~~~~~~~~~pe~~~~ma~~~~ea~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~ 137 (329)
++.+.+...++.-|.+=.-+-+.+.. +.+-++++ ..+++...+. ..|.+++++.|...
T Consensus 12 ~lK~~i~~~L~~~g~eV~D~G~~~~~--~~dy~~~a----------~~va~~V~~~----~~d~GIliCgtGiG------ 69 (140)
T PF02502_consen 12 ELKEAIKEYLEEKGYEVIDFGTYSED--SVDYPDFA----------EKVAEAVASG----EADRGILICGTGIG------ 69 (140)
T ss_dssp HHHHHHHHHHHHTTEEEEEESESSTS--T--HHHHH----------HHHHHHHHTT----SSSEEEEEESSSHH------
T ss_pred HHHHHHHHHHHHCCCEEEEeCCCCCC--CCCHHHHH----------HHHHHHHHcc----cCCeEEEEcCCChh------
Confidence 56666656566667644444443310 11223444 7777777643 24455555444332
Q ss_pred HHHHHHHc-CCCCCcceecccchHHHhcCCCCeEEEEeecCCCC
Q 043382 138 SAFIVNHY-KLRSNILSYNLGALQSAQVQPNSYTLVVSTENITL 180 (329)
Q Consensus 138 aa~I~~~L-glr~~v~~~dl~g~~lL~a~~~~~aLVVs~E~~S~ 180 (329)
.++.+|++ |+| -+.+.|...+.+.+.+.+.++|..+++.++.
T Consensus 70 ~~iaANK~~GIr-Aa~~~d~~~A~~ar~hNdaNVL~lG~~~~~~ 112 (140)
T PF02502_consen 70 MSIAANKVPGIR-AALCSDPYSAKMAREHNDANVLCLGARVIGE 112 (140)
T ss_dssp HHHHHHTSTT---EEE-SSHHHHHHHHHTT--SEEEEETTTSHH
T ss_pred hhhHhhcCCCEE-EEeeCCHHHHHHHHHhcCCcEEEechhhccH
Confidence 35788887 666 5777777777888999999999999988764
No 271
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=24.88 E-value=54 Score=33.14 Aligned_cols=41 Identities=15% Similarity=0.142 Sum_probs=31.0
Q ss_pred HHHHHHHHHhcCCC--CCCcCEEEEeccCCCCCCchHHHHHHHcCCC
Q 043382 104 IGAIDERLAKTGFK--HKDIGILVVNSSLFNPTPSLSAFIVNHYKLR 148 (329)
Q Consensus 104 ~~Aa~~aL~kagv~--p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr 148 (329)
..|++++++++|++ ++|||++=+. ...+...-+..+.||+-
T Consensus 296 ~~a~~~a~~~AGl~~~~~DiD~~Ei~----D~Fa~~~l~~lE~lGl~ 338 (430)
T PRK06365 296 RMAAKEAYEMAGITDPLNDLDLIELH----DAYTSSEIQTYEDLGLC 338 (430)
T ss_pred HHHHHHHHHHcCCCCCHHHCCEEEee----cCCcHHHHHHHHHcCCC
Confidence 57999999999997 7999987554 23444555677888874
No 272
>PTZ00009 heat shock 70 kDa protein; Provisional
Probab=24.85 E-value=1.8e+02 Score=31.14 Aligned_cols=45 Identities=11% Similarity=0.341 Sum_probs=36.2
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCC
Q 043382 103 IIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLR 148 (329)
Q Consensus 103 ~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr 148 (329)
+...++++|++++++++|||.|++.-. ..-+|..-.+|.+.+|-+
T Consensus 315 ~~~~i~~~L~~a~~~~~~i~~ViLvGG-ssriP~v~~~i~~~f~~~ 359 (653)
T PTZ00009 315 TLQPVEKVLKDAGMDKRSVHEVVLVGG-STRIPKVQSLIKDFFNGK 359 (653)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEEECC-CCCChhHHHHHHHHhCCC
Confidence 455688999999999999999887743 235888999999999753
No 273
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=24.63 E-value=48 Score=31.41 Aligned_cols=31 Identities=26% Similarity=0.395 Sum_probs=25.2
Q ss_pred HHHHHhCCCCCCCEEEEEeechhhhhhheee
Q 043382 263 AYAEAKRRIPKGDRICQIGFGAGFNCNTVVW 293 (329)
Q Consensus 263 a~~~~kgrlk~GDrV~~iafGsGf~~~sav~ 293 (329)
++......+.+|+||+=+|.|||+-+.+..|
T Consensus 84 ~~I~~~~gi~pg~rVlEAGtGSG~lt~~La~ 114 (256)
T COG2519 84 GYIVARLGISPGSRVLEAGTGSGALTAYLAR 114 (256)
T ss_pred HHHHHHcCCCCCCEEEEcccCchHHHHHHHH
Confidence 5566677899999999999999987766553
No 274
>cd03765 proteasome_beta_bacterial Bacterial proteasome, beta subunit. The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that stack on top of one another forming an elongated alpha-beta-beta-alpha cylinder with a central cavity. The proteasome alpha and beta subunits are members of the N-terminal nucleophile (Ntn)-hydrolase superfamily. Their N-terminal threonine residues are exposed as a nucleophile in peptide bond hydrolysis. Mammals have 7 alpha and 7 beta proteasome subunits while archaea have one of each.
Probab=24.46 E-value=97 Score=28.82 Aligned_cols=33 Identities=9% Similarity=0.138 Sum_probs=30.3
Q ss_pred HhhchHHHHHHHHHHHHhcCCCCCCcCEEEEec
Q 043382 96 KKETDDVIIGAIDERLAKTGFKHKDIGILVVNS 128 (329)
Q Consensus 96 ~~ea~~l~~~Aa~~aL~kagv~p~dId~LVv~s 128 (329)
.+||.+++.+|++.++++-..++..|++.|+.-
T Consensus 167 ~eeai~la~~al~~a~~rd~~sg~~iev~vI~k 199 (236)
T cd03765 167 LEDAAKCALVSMDSTMRSNLSVGPPLDLLVYER 199 (236)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCEEEEEEEC
Confidence 567899999999999999999999999999874
No 275
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=24.41 E-value=59 Score=32.38 Aligned_cols=42 Identities=10% Similarity=0.114 Sum_probs=31.8
Q ss_pred HHHHHHHHHhcCCC--CCCcCEEEEeccCCCCCCchHHHHHHHcCCCC
Q 043382 104 IGAIDERLAKTGFK--HKDIGILVVNSSLFNPTPSLSAFIVNHYKLRS 149 (329)
Q Consensus 104 ~~Aa~~aL~kagv~--p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~ 149 (329)
..|++++++++|++ ++|||++=++ .+.....-+..+.||+-+
T Consensus 269 ~~aa~~a~~~AGl~~~~~Did~~Ei~----D~Fs~~~l~~~e~lGl~~ 312 (398)
T PRK06157 269 RIAARKAYREAGITDPREELSMAEVH----DCFSITELVTMEDLGLSE 312 (398)
T ss_pred HHHHHHHHHHcCCCCchhcCCEEEEe----cCChHHHHHHHHHcCCCC
Confidence 57899999999998 7999987433 344555667778888753
No 276
>COG1153 FwdD Formylmethanofuran dehydrogenase subunit D [Energy production and conversion]
Probab=23.93 E-value=85 Score=26.45 Aligned_cols=53 Identities=15% Similarity=0.224 Sum_probs=33.6
Q ss_pred cCcHHHHHHHHHHhCCCCCCCEEEEEe-echhhhhhheeeeeeccCCCCCCCC----CCCCccccc
Q 043382 255 SSLVWYELAYAEAKRRIPKGDRICQIG-FGAGFNCNTVVWPVLKTINLNPALD----KNPWIDEID 315 (329)
Q Consensus 255 SaSi~~~La~~~~kgrlk~GDrV~~ia-fGsGf~~~sav~r~~~~~~~~~~~~----~~~w~~~~~ 315 (329)
+|.+++.=+++.+=| ++.||+|.+.+ || ..|+++-..-... +.- .+||+.++-
T Consensus 30 ~a~~~inp~D~~~Lg-v~EGD~VkVkse~G------eVVV~Ak~~~~~~-pG~vfiPmgpWaN~vi 87 (128)
T COG1153 30 CAVCEINPEDMKQLG-VSEGDKVKVKSEFG------EVVVKAKEADGVQ-PGMVFIPMGPWANVVI 87 (128)
T ss_pred eeEEEECHHHHHHhC-CCcCCeEEEEecCc------cEEEEEeeCCCCC-CCeEEecCCcccceee
Confidence 445555556665554 79999999888 87 6777765543110 110 479998764
No 277
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=23.72 E-value=1e+02 Score=27.63 Aligned_cols=35 Identities=17% Similarity=0.265 Sum_probs=27.0
Q ss_pred cCcHHHHHHHHHHhCCCCCCCEEEEEeechhhhhh
Q 043382 255 SSLVWYELAYAEAKRRIPKGDRICQIGFGAGFNCN 289 (329)
Q Consensus 255 SaSi~~~La~~~~kgrlk~GDrV~~iafGsGf~~~ 289 (329)
+-+.|...+.+.+.=.+++|++|+=+|-|+|+...
T Consensus 59 ~~~~p~~~~~~~~~l~~~~~~~VLDiG~GsG~~a~ 93 (215)
T TIGR00080 59 TISAPHMVAMMTELLELKPGMKVLEIGTGSGYQAA 93 (215)
T ss_pred EechHHHHHHHHHHhCCCCcCEEEEECCCccHHHH
Confidence 44556666777766668999999999999997543
No 278
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=23.62 E-value=1.1e+02 Score=27.22 Aligned_cols=37 Identities=19% Similarity=0.152 Sum_probs=27.9
Q ss_pred cCCCCcCcHHHHHHHHHHhCCCCCCCEEEEEeechhhhh
Q 043382 250 FRNTSSSLVWYELAYAEAKRRIPKGDRICQIGFGAGFNC 288 (329)
Q Consensus 250 ~GNtsSaSi~~~La~~~~kgrlk~GDrV~~iafGsGf~~ 288 (329)
+|++. +.|..++++.+.-.+++|++|+=+|-|+|+..
T Consensus 51 ~~~~~--~~p~~~~~~~~~l~~~~~~~VLDiG~GsG~~~ 87 (205)
T PRK13944 51 AGATI--SAPHMVAMMCELIEPRPGMKILEVGTGSGYQA 87 (205)
T ss_pred CCCEe--chHHHHHHHHHhcCCCCCCEEEEECcCccHHH
Confidence 45444 35666777777666789999999999999754
No 279
>COG3473 Maleate cis-trans isomerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=23.61 E-value=3.2e+02 Score=25.46 Aligned_cols=71 Identities=7% Similarity=0.028 Sum_probs=51.1
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEeccC--CCCCCchHHHHHHHcCCCCCcceecccch--HHHhcCCCCeEEEEeecC
Q 043382 104 IGAIDERLAKTGFKHKDIGILVVNSSL--FNPTPSLSAFIVNHYKLRSNILSYNLGAL--QSAQVQPNSYTLVVSTEN 177 (329)
Q Consensus 104 ~~Aa~~aL~kagv~p~dId~LVv~ss~--~~~~Ps~aa~I~~~Lglr~~v~~~dl~g~--~lL~a~~~~~aLVVs~E~ 177 (329)
..+.+.|++ +.-..+|++.++|++ ...-|.....|+.++.--.++..+--+++ +-|++-..+++.|++--.
T Consensus 54 ~~t~~aAl~---Lada~vdvI~Y~CtsgS~i~G~~~d~ei~~~ie~~~~v~vvTts~Avv~aL~al~a~ri~vlTPY~ 128 (238)
T COG3473 54 SYTERAALE---LADAGVDVIVYGCTSGSLIGGPGYDKEIAQRIEEAKGVPVVTTSTAVVEALNALGAQRISVLTPYI 128 (238)
T ss_pred HHHHHHHHh---cCccccCEEEEeccceeeecCCchhHHHHHHHHhccCCceeechHHHHHHHHhhCcceEEEeccch
Confidence 334444444 334678999999988 46788999999999887668888877777 666666677777776433
No 280
>PRK00290 dnaK molecular chaperone DnaK; Provisional
Probab=23.35 E-value=1.7e+02 Score=30.94 Aligned_cols=48 Identities=13% Similarity=0.248 Sum_probs=37.8
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCC
Q 043382 100 DDVIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLR 148 (329)
Q Consensus 100 ~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr 148 (329)
-+=+.+.++++|+++|++++|||.|+++..+- -.|....+|.+.+|..
T Consensus 306 ~~~~~~~i~~~l~~a~~~~~~id~ViLvGGss-riP~v~~~l~~~fg~~ 353 (627)
T PRK00290 306 VERTIEPCKQALKDAGLSVSDIDEVILVGGST-RMPAVQELVKEFFGKE 353 (627)
T ss_pred HHHHHHHHHHHHHHcCCChhhCcEEEEECCcC-CChHHHHHHHHHhCCC
Confidence 33455677899999999999999988874332 3888999999999864
No 281
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=23.03 E-value=1.2e+02 Score=28.58 Aligned_cols=49 Identities=12% Similarity=0.173 Sum_probs=37.1
Q ss_pred HhhchHHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCC
Q 043382 96 KKETDDVIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLR 148 (329)
Q Consensus 96 ~~ea~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr 148 (329)
.+.+.....++++++|++.|++ +|||.++..-... |..-..+.++++++
T Consensus 218 ~~~~~~~~~~~~~~~l~~~~~~-~~i~~~~~h~~~~---~~~~~~~~~~l~~~ 266 (324)
T cd00827 218 FEAAHKLIAKVVRKALDRAGLS-EDIDYFVPHQPNG---KKILEAVAKKLGGP 266 (324)
T ss_pred HHHHhHHHHHHHHHHHHHcccc-cccceeeccCchH---HHHHHHHHHHccch
Confidence 3455677788999999999999 9999776653322 15667788999984
No 282
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=23.00 E-value=1.6e+02 Score=24.70 Aligned_cols=48 Identities=8% Similarity=0.027 Sum_probs=32.9
Q ss_pred HHHHHHHHhcCCCCCCcCEEEEeccC--CCCCCchHHHHHHHcCCCCCcceec
Q 043382 105 GAIDERLAKTGFKHKDIGILVVNSSL--FNPTPSLSAFIVNHYKLRSNILSYN 155 (329)
Q Consensus 105 ~Aa~~aL~kagv~p~dId~LVv~ss~--~~~~Ps~aa~I~~~Lglr~~v~~~d 155 (329)
+-.+++|++.||++++ .||+-|.. ....-+....+.+.+|.. ++.-+|
T Consensus 81 ~~~~~~~~~~GI~~~~--~vVvY~~~~~~g~~A~r~~~~l~~~G~~-~v~ild 130 (138)
T cd01445 81 AEFAAMFEAKGIDLDK--HLIATDGDDLGGFTACHIALAARLCGHP-DVAILD 130 (138)
T ss_pred HHHHHHHHHcCCCCCC--eEEEECCCCCcchHHHHHHHHHHHcCCC-CeEEeC
Confidence 3577889999999874 45555543 333445566788899987 777765
No 283
>PLN03173 chalcone synthase; Provisional
Probab=22.11 E-value=1.8e+02 Score=29.01 Aligned_cols=51 Identities=8% Similarity=0.113 Sum_probs=38.4
Q ss_pred HhhchHHHHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCCCC
Q 043382 96 KKETDDVIIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLRSN 150 (329)
Q Consensus 96 ~~ea~~l~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr~~ 150 (329)
.+.+...+-+.++++|++.|++++|||..++. ..-+..-..++++||++++
T Consensus 272 p~~~~~~~~~~i~~~L~~~gl~~~di~~~v~H----qgg~~Il~~v~~~LgL~~e 322 (391)
T PLN03173 272 PGLISKNVEKSLTEAFKPLGISDWNSLFWIAH----PGGPAILDQVEAKLALKPE 322 (391)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCccccCeEEEC----CCcHHHHHHHHHHcCCChH
Confidence 34456677778899999999999999987653 2344555678999999754
No 284
>PTZ00400 DnaK-type molecular chaperone; Provisional
Probab=22.07 E-value=1.7e+02 Score=31.45 Aligned_cols=45 Identities=11% Similarity=0.290 Sum_probs=36.5
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEeccCCCCCCchHHHHHHHcCCC
Q 043382 103 IIGAIDERLAKTGFKHKDIGILVVNSSLFNPTPSLSAFIVNHYKLR 148 (329)
Q Consensus 103 ~~~Aa~~aL~kagv~p~dId~LVv~ss~~~~~Ps~aa~I~~~Lglr 148 (329)
+...++++|+++|++++|||.|+....+ ...|.+..+|.+.+|..
T Consensus 350 ~~~~i~~~L~~a~~~~~~i~~ViLvGGs-sriP~v~~~l~~~f~~~ 394 (663)
T PTZ00400 350 TIEPCEKCIKDAGVKKDELNDVILVGGM-TRMPKVSETVKKIFGKE 394 (663)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEEECCc-cCChHHHHHHHHHhCCC
Confidence 3566789999999999999999877322 35788999999999864
No 285
>PF14451 Ub-Mut7C: Mut7-C ubiquitin
Probab=21.93 E-value=60 Score=25.18 Aligned_cols=25 Identities=20% Similarity=0.582 Sum_probs=21.9
Q ss_pred HHHHHHHhcCCCCCCcCEEEEeccC
Q 043382 106 AIDERLAKTGFKHKDIGILVVNSSL 130 (329)
Q Consensus 106 Aa~~aL~kagv~p~dId~LVv~ss~ 130 (329)
.++++++.-|+...||+.|.+|...
T Consensus 34 tvkd~IEsLGVP~tEV~~i~vNG~~ 58 (81)
T PF14451_consen 34 TVKDVIESLGVPHTEVGLILVNGRP 58 (81)
T ss_pred cHHHHHHHcCCChHHeEEEEECCEE
Confidence 3789999999999999999999543
No 286
>PRK06260 threonine synthase; Validated
Probab=21.20 E-value=86 Score=31.20 Aligned_cols=39 Identities=18% Similarity=0.075 Sum_probs=31.2
Q ss_pred CcCcHHHHHHHHHHhCCCCCCCEEEEEeechhhhhhhee
Q 043382 254 SSSLVWYELAYAEAKRRIPKGDRICQIGFGAGFNCNTVV 292 (329)
Q Consensus 254 sSaSi~~~La~~~~kgrlk~GDrV~~iafGsGf~~~sav 292 (329)
+|+...-.+..+.++|.+++|++|+++--|+|+|-...+
T Consensus 336 ssaaalAa~~~l~~~g~i~~~~~VV~i~tG~glK~~~~~ 374 (397)
T PRK06260 336 ASAASVAGLIKLVEEGVIDKDERVVCITTGHLLKDPDAA 374 (397)
T ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEEeCCCccCchHHH
Confidence 466666777777788899999999999999998754433
No 287
>PLN02569 threonine synthase
Probab=21.14 E-value=84 Score=32.45 Aligned_cols=41 Identities=15% Similarity=0.114 Sum_probs=32.8
Q ss_pred CcCcHHHHHHHHHHhCCCCCCCEEEEEeechhhhhhheeee
Q 043382 254 SSSLVWYELAYAEAKRRIPKGDRICQIGFGAGFNCNTVVWP 294 (329)
Q Consensus 254 sSaSi~~~La~~~~kgrlk~GDrV~~iafGsGf~~~sav~r 294 (329)
+|+.-.-.+..+.++|.++++++|+++.-|+|++.......
T Consensus 407 ssAaalAal~kl~~~g~i~~~~~VV~i~Tg~GlK~~~~~~~ 447 (484)
T PLN02569 407 HTGVALAALKKLRASGVIGPTDRTVVVSTAHGLKFTQSKID 447 (484)
T ss_pred hHHHHHHHHHHHHHcCCCCCCCcEEEEeCCCcccChhHHHH
Confidence 56666667777778888999999999999999998654443
No 288
>PF05378 Hydant_A_N: Hydantoinase/oxoprolinase N-terminal region; InterPro: IPR008040 This domain is found at the N terminus of the hydantoinase/oxoprolinase IPR002821 from INTERPRO family.
Probab=21.00 E-value=70 Score=28.23 Aligned_cols=29 Identities=24% Similarity=0.387 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHhcCCCCCCcCEEEEeccC
Q 043382 102 VIIGAIDERLAKTGFKHKDIGILVVNSSL 130 (329)
Q Consensus 102 l~~~Aa~~aL~kagv~p~dId~LVv~ss~ 130 (329)
-+.+|+++++++.++++++|+.++..|+.
T Consensus 38 gi~~al~~l~~~~~~~~~~i~~v~~gTT~ 66 (176)
T PF05378_consen 38 GILEALDALLEESGIDPSDIDRVRHGTTV 66 (176)
T ss_pred HHHHHHHhhhcccCCChhhCcEEEeccHH
Confidence 35788999999999999999999988754
No 289
>TIGR02609 doc_partner putative addiction module antidote. Members of this protein family are putative addiction module antidote proteins that appear recurringly in two-gene operons with members of the Doc (death-on-curing) family TIGR01550. Members of this family contain a SpoVT/AbrB-like domain (pfam04014). Note that the gene pairs with a member of this family tend to be found on bacterial chromosomes, not on plasmids.
Probab=20.04 E-value=60 Score=24.51 Aligned_cols=36 Identities=11% Similarity=0.028 Sum_probs=28.1
Q ss_pred cccccCCCCcCcHHHHHHHHHHhCCCCCCCEEEEEeech
Q 043382 246 TLYRFRNTSSSLVWYELAYAEAKRRIPKGDRICQIGFGA 284 (329)
Q Consensus 246 tl~~~GNtsSaSi~~~La~~~~kgrlk~GDrV~~iafGs 284 (329)
.+.++||+...+||=++...+ .+++||.|-+.--|.
T Consensus 2 ki~k~GNS~~vtIPk~i~~~l---gl~~Gd~v~v~~~~~ 37 (74)
T TIGR02609 2 KIRKVGNSLVVTLPKEVLESL---GLKEGDTLYVDEEEG 37 (74)
T ss_pred cEEEECCeeEEEECHHHHHHc---CcCCCCEEEEEEECC
Confidence 367899999999998876643 489999997665553
Done!